locus-tag class description AM435_RS00005 PF14579 Helix-hairpin-helix motif AM435_RS00005 PF07733 Bacterial DNA polymerase III alpha NTPase domain AM435_RS00005 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AM435_RS00005 PF02811 PHP domain AM435_RS00025 PF00154 recA bacterial DNA recombination protein AM435_RS00070 PF13476 AAA domain AM435_RS00100 PF13610 DDE domain AM435_RS00110 PF13610 DDE domain AM435_RS00115 PF01636 Phosphotransferase enzyme family AM435_RS00120 PF12848 ABC transporter AM435_RS00120 PF00005 ABC transporter AM435_RS00125 PF13610 DDE domain AM435_RS00135 PF13610 DDE domain AM435_RS00150 PF00268 Ribonucleotide reductase, small chain AM435_RS00175 PF00692 dUTPase AM435_RS00275 PF00929 Exonuclease AM435_RS00420 PF02195 ParB-like nuclease domain AM435_RS00425 PF09383 NIL domain AM435_RS00425 PF00005 ABC transporter AM435_RS00535 PF00877 NlpC/P60 family AM435_RS00585 PF08275 DNA primase catalytic core, N-terminal domain AM435_RS00585 PF10410 DnaB-helicase binding domain of primase AM435_RS00585 PF01807 CHC2 zinc finger AM435_RS00625 PF00625 Guanylate kinase AM435_RS00650 PF00589 Phage integrase family AM435_RS00650 PF02899 Phage integrase, N-terminal SAM-like domain AM435_RS00685 PF06986 Type-1V conjugative transfer system mating pair stabilisation AM435_RS00695 PF06834 TraU protein AM435_RS00730 PF13098 Thioredoxin-like domain AM435_RS00730 PF10411 Disulfide bond isomerase protein N-terminus AM435_RS00765 PF01464 Transglycosylase SLT domain AM435_RS00780 PF02796 Helix-turn-helix domain of resolvase AM435_RS00780 PF00239 Resolvase, N terminal domain AM435_RS00795 PF13936 Helix-turn-helix domain AM435_RS00795 PF00665 Integrase core domain AM435_RS00830 PF18272 single-stranded DNA binding TraI N-terminal subdomain AM435_RS00830 PF07057 DNA helicase TraI AM435_RS00830 PF18340 DNA relaxase TraI 2B/2B-like domain AM435_RS00830 PF08751 TrwC relaxase AM435_RS00865 PF00226 DnaJ domain AM435_RS00865 PF01556 DnaJ C terminal domain AM435_RS00865 PF00684 DnaJ central domain AM435_RS00970 PF05816 Toxic anion resistance protein (TelA) AM435_RS00990 PF17762 HTH domain found in ParB protein AM435_RS00990 PF02195 ParB-like nuclease domain AM435_RS00995 PF13614 AAA domain AM435_RS01050 PF00816 H-NS histone family AM435_RS01060 PF00905 Penicillin binding protein transpeptidase domain AM435_RS01070 PF00565 Staphylococcal nuclease homologue AM435_RS01140 PF11798 IMS family HHH motif AM435_RS01140 PF00817 impB/mucB/samB family AM435_RS01140 PF13438 Domain of unknown function (DUF4113) AM435_RS01140 PF11799 impB/mucB/samB family C-terminal domain AM435_RS01160 PF06122 Conjugative relaxosome accessory transposon protein AM435_RS01185 PF13737 Transposase DDE domain AM435_RS01195 PF00330 Aconitase family (aconitate hydratase) AM435_RS01195 PF11791 Aconitate B N-terminal domain AM435_RS01195 PF06434 Aconitate hydratase 2 N-terminus AM435_RS01205 PF00027 Cyclic nucleotide-binding domain AM435_RS01205 PF00520 Ion transport protein AM435_RS01210 PF07690 Major Facilitator Superfamily AM435_RS01225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM435_RS01225 PF03466 LysR substrate binding domain AM435_RS01230 PF04284 Protein of unknown function (DUF441) AM435_RS01240 PF01479 S4 domain AM435_RS01240 PF00849 RNA pseudouridylate synthase AM435_RS01255 PF00849 RNA pseudouridylate synthase AM435_RS01255 PF01479 S4 domain AM435_RS01260 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AM435_RS01265 PF01119 DNA mismatch repair protein, C-terminal domain AM435_RS01265 PF08676 MutL C terminal dimerisation domain AM435_RS01275 PF17209 Hfq protein AM435_RS01285 PF00881 Nitroreductase family AM435_RS01295 PF00149 Calcineurin-like phosphoesterase AM435_RS01300 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AM435_RS01305 PF00749 tRNA synthetases class I (E and Q), catalytic domain AM435_RS01305 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AM435_RS01310 PF00958 GMP synthase C terminal domain AM435_RS01310 PF00117 Glutamine amidotransferase class-I AM435_RS01310 PF02540 NAD synthase AM435_RS01315 PF05985 Ethanolamine ammonia-lyase light chain (EutC) AM435_RS01320 PF06751 Ethanolamine ammonia lyase large subunit (EutB) AM435_RS01325 PF13520 Amino acid permease AM435_RS01330 PF00171 Aldehyde dehydrogenase family AM435_RS01345 PF00465 Iron-containing alcohol dehydrogenase AM435_RS01350 PF14493 Helix-turn-helix domain AM435_RS01350 PF05970 PIF1-like helicase AM435_RS01360 PF06445 GyrI-like small molecule binding domain AM435_RS01365 PF02110 Hydroxyethylthiazole kinase family AM435_RS01380 PF11940 Domain of unknown function (DUF3458) Ig-like fold AM435_RS01380 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AM435_RS01380 PF01433 Peptidase family M1 domain AM435_RS01390 PF00106 short chain dehydrogenase AM435_RS01400 PF01817 Chorismate mutase type II AM435_RS01405 PF01037 Lrp/AsnC ligand binding domain AM435_RS01420 PF00440 Bacterial regulatory proteins, tetR family AM435_RS01425 PF00593 TonB dependent receptor AM435_RS01425 PF07715 TonB-dependent Receptor Plug Domain AM435_RS01430 PF00924 Mechanosensitive ion channel AM435_RS01445 PF13737 Transposase DDE domain AM435_RS01455 PF00005 ABC transporter AM435_RS01455 PF12848 ABC transporter AM435_RS01460 PF00582 Universal stress protein family AM435_RS01475 PF00690 Cation transporter/ATPase, N-terminus AM435_RS01475 PF00689 Cation transporting ATPase, C-terminus AM435_RS01480 PF02308 MgtC family AM435_RS01485 PF03594 Benzoate membrane transport protein AM435_RS01490 PF01037 Lrp/AsnC ligand binding domain AM435_RS01495 PF01810 LysE type translocator AM435_RS01500 PF00923 Transaldolase/Fructose-6-phosphate aldolase AM435_RS01505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM435_RS01505 PF03466 LysR substrate binding domain AM435_RS01515 PF02803 Thiolase, C-terminal domain AM435_RS01515 PF00108 Thiolase, N-terminal domain AM435_RS01525 PF01575 MaoC like domain AM435_RS01530 PF00144 Beta-lactamase AM435_RS01540 PF07690 Major Facilitator Superfamily AM435_RS01545 PF12169 DNA polymerase III subunits gamma and tau domain III AM435_RS01545 PF12170 DNA polymerase III tau subunit V interacting with alpha AM435_RS01545 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AM435_RS01550 PF05506 Domain of unknown function (DUF756) AM435_RS01550 PF04185 Phosphoesterase family AM435_RS01555 PF03061 Thioesterase superfamily AM435_RS01560 PF00465 Iron-containing alcohol dehydrogenase AM435_RS01570 PF01451 Low molecular weight phosphotyrosine protein phosphatase AM435_RS01575 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AM435_RS01575 PF01565 FAD binding domain AM435_RS01590 PF01645 Conserved region in glutamate synthase AM435_RS01650 PF13737 Transposase DDE domain AM435_RS01895 PF05016 ParE toxin of type II toxin-antitoxin system, parDE AM435_RS01935 PF00712 DNA polymerase III beta subunit, N-terminal domain AM435_RS01935 PF02767 DNA polymerase III beta subunit, central domain AM435_RS01935 PF02768 DNA polymerase III beta subunit, C-terminal domain AM435_RS02010 PF12832 MFS_1 like family AM435_RS02020 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM435_RS02020 PF00289 Biotin carboxylase, N-terminal domain AM435_RS02020 PF02785 Biotin carboxylase C-terminal domain AM435_RS02025 PF00364 Biotin-requiring enzyme AM435_RS02030 PF01220 Dehydroquinase class II AM435_RS02035 PF13438 Domain of unknown function (DUF4113) AM435_RS02035 PF00817 impB/mucB/samB family AM435_RS02035 PF11799 impB/mucB/samB family C-terminal domain AM435_RS02045 PF00005 ABC transporter AM435_RS02050 PF00486 Transcriptional regulatory protein, C terminal AM435_RS02050 PF00072 Response regulator receiver domain AM435_RS02060 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AM435_RS02060 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AM435_RS02060 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM435_RS02060 PF13806 Rieske-like [2Fe-2S] domain AM435_RS02060 PF18267 Rubredoxin NAD+ reductase C-terminal domain AM435_RS02060 PF04324 BFD-like [2Fe-2S] binding domain AM435_RS02065 PF18267 Rubredoxin NAD+ reductase C-terminal domain AM435_RS02065 PF04324 BFD-like [2Fe-2S] binding domain AM435_RS02065 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM435_RS02065 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AM435_RS02065 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AM435_RS02070 PF01568 Molydopterin dinucleotide binding domain AM435_RS02070 PF00384 Molybdopterin oxidoreductase AM435_RS02070 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM435_RS02070 PF04324 BFD-like [2Fe-2S] binding domain AM435_RS02075 PF12804 MobA-like NTP transferase domain AM435_RS02080 PF01568 Molydopterin dinucleotide binding domain AM435_RS02080 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM435_RS02080 PF00384 Molybdopterin oxidoreductase AM435_RS02085 PF06463 Molybdenum Cofactor Synthesis C AM435_RS02085 PF04055 Radical SAM superfamily AM435_RS02095 PF02391 MoaE protein AM435_RS02100 PF01967 MoaC family AM435_RS02100 PF00994 Probable molybdopterin binding domain AM435_RS02105 PF00994 Probable molybdopterin binding domain AM435_RS02105 PF03454 MoeA C-terminal region (domain IV) AM435_RS02105 PF03453 MoeA N-terminal region (domain I and II) AM435_RS02110 PF01638 HxlR-like helix-turn-helix AM435_RS02115 PF00155 Aminotransferase class I and II AM435_RS02115 PF00392 Bacterial regulatory proteins, gntR family AM435_RS02120 PF00892 EamA-like transporter family AM435_RS02140 PF02635 DsrE/DsrF-like family AM435_RS02145 PF16363 GDP-mannose 4,6 dehydratase AM435_RS02150 PF00206 Lyase AM435_RS02150 PF10415 Fumarase C C-terminus AM435_RS02175 PF01266 FAD dependent oxidoreductase AM435_RS02185 PF02542 YgbB family AM435_RS02195 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AM435_RS02195 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AM435_RS02200 PF00440 Bacterial regulatory proteins, tetR family AM435_RS02205 PF02954 Bacterial regulatory protein, Fis family AM435_RS02205 PF00158 Sigma-54 interaction domain AM435_RS02205 PF00072 Response regulator receiver domain AM435_RS02210 PF00512 His Kinase A (phospho-acceptor) domain AM435_RS02210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM435_RS02210 PF00989 PAS fold AM435_RS02215 PF04055 Radical SAM superfamily AM435_RS02215 PF00919 Uncharacterized protein family UPF0004 AM435_RS02215 PF18693 TRAM domain AM435_RS02220 PF00696 Amino acid kinase family AM435_RS02225 PF01765 Ribosome recycling factor AM435_RS02230 PF01255 Putative undecaprenyl diphosphate synthase AM435_RS02240 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AM435_RS02240 PF13288 DXP reductoisomerase C-terminal domain AM435_RS02240 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AM435_RS02245 PF02163 Peptidase family M50 AM435_RS02245 PF17820 PDZ domain AM435_RS02245 PF13180 PDZ domain AM435_RS02250 PF01103 Surface antigen AM435_RS02250 PF07244 Surface antigen variable number repeat AM435_RS02260 PF00132 Bacterial transferase hexapeptide (six repeats) AM435_RS02260 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AM435_RS02265 PF07977 FabA-like domain AM435_RS02270 PF00132 Bacterial transferase hexapeptide (six repeats) AM435_RS02270 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AM435_RS02285 PF02631 RecX family AM435_RS02290 PF00154 recA bacterial DNA recombination protein AM435_RS02295 PF01479 S4 domain AM435_RS02300 PF13419 Haloacid dehalogenase-like hydrolase AM435_RS02325 PF01037 Lrp/AsnC ligand binding domain AM435_RS02330 PF00266 Aminotransferase class-V AM435_RS02335 PF00324 Amino acid permease AM435_RS02345 PF00082 Subtilase family AM435_RS02345 PF05922 Peptidase inhibitor I9 AM435_RS02350 PF01740 STAS domain AM435_RS02350 PF00916 Sulfate permease family AM435_RS02355 PF02586 SOS response associated peptidase (SRAP) AM435_RS02360 PF07995 Glucose / Sorbosone dehydrogenase AM435_RS02370 PF03707 Bacterial signalling protein N terminal repeat AM435_RS02370 PF00990 Diguanylate cyclase, GGDEF domain AM435_RS02370 PF00563 EAL domain AM435_RS02390 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM435_RS02390 PF02378 Phosphotransferase system, EIIC AM435_RS02395 PF00294 pfkB family carbohydrate kinase AM435_RS02400 PF00381 PTS HPr component phosphorylation site AM435_RS02400 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM435_RS02400 PF02896 PEP-utilising enzyme, TIM barrel domain AM435_RS02400 PF05524 PEP-utilising enzyme, N-terminal AM435_RS02400 PF00391 PEP-utilising enzyme, mobile domain AM435_RS02425 PF05525 Branched-chain amino acid transport protein AM435_RS02430 PF00557 Metallopeptidase family M24 AM435_RS02435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM435_RS02435 PF03466 LysR substrate binding domain AM435_RS02445 PF00462 Glutaredoxin AM435_RS02450 PF00202 Aminotransferase class-III AM435_RS02455 PF00571 CBS domain AM435_RS02455 PF00478 IMP dehydrogenase / GMP reductase domain AM435_RS02480 PF02881 SRP54-type protein, helical bundle domain AM435_RS02480 PF00448 SRP54-type protein, GTPase domain AM435_RS02490 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) AM435_RS02505 PF08173 Membrane bound YbgT-like protein AM435_RS02510 PF02322 Cytochrome bd terminal oxidase subunit II AM435_RS02515 PF01654 Cytochrome bd terminal oxidase subunit I AM435_RS02525 PF13737 Transposase DDE domain AM435_RS02530 PF07290 Protein of unknown function (DUF1449) AM435_RS02540 PF00294 pfkB family carbohydrate kinase AM435_RS02545 PF07715 TonB-dependent Receptor Plug Domain AM435_RS02545 PF00593 TonB dependent receptor AM435_RS02550 PF05193 Peptidase M16 inactive domain AM435_RS02550 PF08367 Peptidase M16C associated AM435_RS02550 PF00675 Insulinase (Peptidase family M16) AM435_RS02555 PF02253 Phospholipase A1 AM435_RS02560 PF02386 Cation transport protein AM435_RS02565 PF02080 TrkA-C domain AM435_RS02565 PF02254 TrkA-N domain AM435_RS02570 PF00585 C-terminal regulatory domain of Threonine dehydratase AM435_RS02570 PF00291 Pyridoxal-phosphate dependent enzyme AM435_RS02575 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AM435_RS02590 PF02774 Semialdehyde dehydrogenase, dimerisation domain AM435_RS02590 PF01118 Semialdehyde dehydrogenase, NAD binding domain AM435_RS02600 PF02617 ATP-dependent Clp protease adaptor protein ClpS AM435_RS02605 PF02861 Clp amino terminal domain, pathogenicity island component AM435_RS02605 PF10431 C-terminal, D2-small domain, of ClpB protein AM435_RS02605 PF00004 ATPase family associated with various cellular activities (AAA) AM435_RS02605 PF07724 AAA domain (Cdc48 subfamily) AM435_RS02605 PF17871 AAA lid domain AM435_RS02610 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AM435_RS02615 PF00793 DAHP synthetase I family AM435_RS02630 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM435_RS02630 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM435_RS02660 PF06418 CTP synthase N-terminus AM435_RS02660 PF00117 Glutamine amidotransferase class-I AM435_RS02665 PF00793 DAHP synthetase I family AM435_RS02670 PF00113 Enolase, C-terminal TIM barrel domain AM435_RS02670 PF03952 Enolase, N-terminal domain AM435_RS02675 PF04239 Protein of unknown function (DUF421) AM435_RS02680 PF04977 Septum formation initiator AM435_RS02685 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AM435_RS02690 PF01144 Coenzyme A transferase AM435_RS02695 PF01144 Coenzyme A transferase AM435_RS02700 PF00108 Thiolase, N-terminal domain AM435_RS02700 PF02803 Thiolase, C-terminal domain AM435_RS02705 PF00206 Lyase AM435_RS02705 PF10397 Adenylosuccinate lyase C-terminus AM435_RS02710 PF00561 alpha/beta hydrolase fold AM435_RS02715 PF07690 Major Facilitator Superfamily AM435_RS02720 PF02627 Carboxymuconolactone decarboxylase family AM435_RS02725 PF00775 Dioxygenase AM435_RS02725 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal AM435_RS02730 PF00775 Dioxygenase AM435_RS02735 PF01487 Type I 3-dehydroquinase AM435_RS02740 PF05048 Periplasmic copper-binding protein (NosD) AM435_RS02745 PF04966 Carbohydrate-selective porin, OprB family AM435_RS02750 PF01011 PQQ enzyme repeat AM435_RS02750 PF13360 PQQ-like domain AM435_RS02760 PF04143 Sulphur transport AM435_RS02770 PF00753 Metallo-beta-lactamase superfamily AM435_RS02775 PF09339 IclR helix-turn-helix domain AM435_RS02775 PF01614 Bacterial transcriptional regulator AM435_RS02780 PF03466 LysR substrate binding domain AM435_RS02780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM435_RS02785 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM435_RS02785 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM435_RS02785 PF02770 Acyl-CoA dehydrogenase, middle domain AM435_RS02800 PF00106 short chain dehydrogenase AM435_RS02810 PF07690 Major Facilitator Superfamily AM435_RS02820 PF01425 Amidase AM435_RS02825 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AM435_RS02840 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AM435_RS02840 PF00355 Rieske [2Fe-2S] domain AM435_RS02855 PF00111 2Fe-2S iron-sulfur cluster binding domain AM435_RS02855 PF00175 Oxidoreductase NAD-binding domain AM435_RS02860 PF01613 Flavin reductase like domain AM435_RS02865 PF12833 Helix-turn-helix domain AM435_RS02865 PF02311 AraC-like ligand binding domain AM435_RS02870 PF07833 Copper amine oxidase N-terminal domain AM435_RS02870 PF02728 Copper amine oxidase, N3 domain AM435_RS02870 PF02727 Copper amine oxidase, N2 domain AM435_RS02870 PF01179 Copper amine oxidase, enzyme domain AM435_RS02880 PF00171 Aldehyde dehydrogenase family AM435_RS02885 PF01804 Penicillin amidase AM435_RS02890 PF12146 Serine aminopeptidase, S33 AM435_RS02895 PF02803 Thiolase, C-terminal domain AM435_RS02895 PF00108 Thiolase, N-terminal domain AM435_RS02900 PF01144 Coenzyme A transferase AM435_RS02905 PF01144 Coenzyme A transferase AM435_RS02910 PF04444 Catechol dioxygenase N terminus AM435_RS02910 PF00775 Dioxygenase AM435_RS02915 PF02426 Muconolactone delta-isomerase AM435_RS02920 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AM435_RS02920 PF13378 Enolase C-terminal domain-like AM435_RS02925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM435_RS02925 PF03466 LysR substrate binding domain AM435_RS02955 PF00171 Aldehyde dehydrogenase family AM435_RS02960 PF00920 Dehydratase family AM435_RS02970 PF03466 LysR substrate binding domain AM435_RS02970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM435_RS02975 PF01370 NAD dependent epimerase/dehydratase family AM435_RS02980 PF07690 Major Facilitator Superfamily AM435_RS02985 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AM435_RS02985 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM435_RS02990 PF06719 AraC-type transcriptional regulator N-terminus AM435_RS02990 PF12833 Helix-turn-helix domain AM435_RS03005 PF08240 Alcohol dehydrogenase GroES-like domain AM435_RS03005 PF00107 Zinc-binding dehydrogenase AM435_RS03015 PF01032 FecCD transport family AM435_RS03020 PF00005 ABC transporter AM435_RS03040 PF14572 Phosphoribosyl synthetase-associated domain AM435_RS03040 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AM435_RS03045 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AM435_RS03120 PF00196 Bacterial regulatory proteins, luxR family AM435_RS03125 PF01425 Amidase AM435_RS03130 PF13533 Biotin-lipoyl like AM435_RS03135 PF07690 Major Facilitator Superfamily AM435_RS03160 PF01975 Survival protein SurE AM435_RS03170 PF02824 TGS domain AM435_RS03170 PF13291 ACT domain AM435_RS03170 PF04607 Region found in RelA / SpoT proteins AM435_RS03225 PF12146 Serine aminopeptidase, S33 AM435_RS03230 PF12833 Helix-turn-helix domain AM435_RS03230 PF02311 AraC-like ligand binding domain AM435_RS03240 PF00512 His Kinase A (phospho-acceptor) domain AM435_RS03240 PF16527 Two-component sensor protein CpxA, periplasmic domain AM435_RS03240 PF00672 HAMP domain AM435_RS03240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM435_RS03245 PF00486 Transcriptional regulatory protein, C terminal AM435_RS03245 PF00072 Response regulator receiver domain AM435_RS03250 PF00529 HlyD membrane-fusion protein of T1SS AM435_RS03250 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM435_RS03255 PF00873 AcrB/AcrD/AcrF family AM435_RS03260 PF02321 Outer membrane efflux protein AM435_RS03265 PF12146 Serine aminopeptidase, S33 AM435_RS03270 PF00743 Flavin-binding monooxygenase-like AM435_RS03275 PF01593 Flavin containing amine oxidoreductase AM435_RS03290 PF01266 FAD dependent oxidoreductase AM435_RS03310 PF16970 Type-1 fimbrial protein, A AM435_RS03315 PF02753 Pili assembly chaperone PapD, C-terminal domain AM435_RS03315 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM435_RS03320 PF00577 Outer membrane usher protein AM435_RS03320 PF13954 PapC N-terminal domain AM435_RS03320 PF13953 PapC C-terminal domain AM435_RS03325 PF00419 Fimbrial protein AM435_RS03335 PF08240 Alcohol dehydrogenase GroES-like domain AM435_RS03335 PF00107 Zinc-binding dehydrogenase AM435_RS03345 PF00199 Catalase AM435_RS03360 PF13091 PLD-like domain AM435_RS03380 PF01244 Membrane dipeptidase (Peptidase family M19) AM435_RS03385 PF04055 Radical SAM superfamily AM435_RS03385 PF13186 Iron-sulfur cluster-binding domain AM435_RS03390 PF05402 Coenzyme PQQ synthesis protein D (PqqD) AM435_RS03395 PF03070 TENA/THI-4/PQQC family AM435_RS03400 PF12706 Beta-lactamase superfamily domain AM435_RS03405 PF08042 PqqA family AM435_RS03410 PF13089 Polyphosphate kinase N-terminal domain AM435_RS03410 PF02503 Polyphosphate kinase middle domain AM435_RS03410 PF13090 Polyphosphate kinase C-terminal domain 2 AM435_RS03410 PF17941 Polyphosphate kinase C-terminal domain 1 AM435_RS03415 PF00149 Calcineurin-like phosphoesterase AM435_RS03425 PF00857 Isochorismatase family AM435_RS03425 PF00550 Phosphopantetheine attachment site AM435_RS03430 PF00106 short chain dehydrogenase AM435_RS03435 PF00005 ABC transporter AM435_RS03435 PF03459 TOBE domain AM435_RS03440 PF00528 Binding-protein-dependent transport system inner membrane component AM435_RS03450 PF03459 TOBE domain AM435_RS03450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM435_RS03455 PF00355 Rieske [2Fe-2S] domain AM435_RS03455 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AM435_RS03460 PF00866 Ring hydroxylating beta subunit AM435_RS03465 PF00175 Oxidoreductase NAD-binding domain AM435_RS03465 PF00111 2Fe-2S iron-sulfur cluster binding domain AM435_RS03465 PF00970 Oxidoreductase FAD-binding domain AM435_RS03470 PF14525 AraC-binding-like domain AM435_RS03470 PF12833 Helix-turn-helix domain AM435_RS03480 PF01613 Flavin reductase like domain AM435_RS03495 PF01738 Dienelactone hydrolase family AM435_RS03500 PF07690 Major Facilitator Superfamily AM435_RS03505 PF12833 Helix-turn-helix domain AM435_RS03505 PF06719 AraC-type transcriptional regulator N-terminus AM435_RS03525 PF03466 LysR substrate binding domain AM435_RS03525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM435_RS03530 PF01144 Coenzyme A transferase AM435_RS03535 PF01144 Coenzyme A transferase AM435_RS03540 PF02667 Short chain fatty acid transporter AM435_RS03545 PF02803 Thiolase, C-terminal domain AM435_RS03545 PF00108 Thiolase, N-terminal domain AM435_RS03550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM435_RS03550 PF03466 LysR substrate binding domain AM435_RS03555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM435_RS03555 PF03466 LysR substrate binding domain AM435_RS03570 PF10415 Fumarase C C-terminus AM435_RS03570 PF00206 Lyase AM435_RS03575 PF00593 TonB dependent receptor AM435_RS03575 PF07715 TonB-dependent Receptor Plug Domain AM435_RS03580 PF00083 Sugar (and other) transporter AM435_RS03595 PF00005 ABC transporter AM435_RS03600 PF00528 Binding-protein-dependent transport system inner membrane component AM435_RS03605 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AM435_RS03620 PF00392 Bacterial regulatory proteins, gntR family AM435_RS03620 PF07702 UTRA domain AM435_RS03630 PF02525 Flavodoxin-like fold AM435_RS03635 PF01638 HxlR-like helix-turn-helix AM435_RS03640 PF12833 Helix-turn-helix domain AM435_RS03640 PF06445 GyrI-like small molecule binding domain AM435_RS03655 PF01925 Sulfite exporter TauE/SafE AM435_RS03660 PF04273 Putative phosphatase (DUF442) AM435_RS03660 PF00753 Metallo-beta-lactamase superfamily AM435_RS03665 PF00753 Metallo-beta-lactamase superfamily AM435_RS03665 PF04273 Putative phosphatase (DUF442) AM435_RS03670 PF00158 Sigma-54 interaction domain AM435_RS03670 PF00072 Response regulator receiver domain AM435_RS03670 PF02954 Bacterial regulatory protein, Fis family AM435_RS03675 PF01062 Bestrophin, RFP-TM, chloride channel AM435_RS03680 PF08240 Alcohol dehydrogenase GroES-like domain AM435_RS03680 PF00107 Zinc-binding dehydrogenase AM435_RS03705 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM435_RS03705 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM435_RS03710 PF00364 Biotin-requiring enzyme AM435_RS03710 PF02817 e3 binding domain AM435_RS03710 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AM435_RS03715 PF02780 Transketolase, C-terminal domain AM435_RS03715 PF02779 Transketolase, pyrimidine binding domain AM435_RS03720 PF00676 Dehydrogenase E1 component AM435_RS03725 PF04055 Radical SAM superfamily AM435_RS03745 PF08448 PAS fold AM435_RS03745 PF00990 Diguanylate cyclase, GGDEF domain AM435_RS03750 PF01264 Chorismate synthase AM435_RS03755 PF05175 Methyltransferase small domain AM435_RS03760 PF00291 Pyridoxal-phosphate dependent enzyme AM435_RS03770 PF17862 AAA+ lid domain AM435_RS03770 PF00004 ATPase family associated with various cellular activities (AAA) AM435_RS03770 PF01434 Peptidase family M41 AM435_RS03780 PF05166 YcgL domain AM435_RS03800 PF00570 HRDC domain AM435_RS03800 PF01612 3'-5' exonuclease AM435_RS03805 PF13662 Toprim domain AM435_RS03805 PF02132 RecR protein AM435_RS03810 PF02575 YbaB/EbfC DNA-binding family AM435_RS03820 PF01053 Cys/Met metabolism PLP-dependent enzyme AM435_RS03825 PF00561 alpha/beta hydrolase fold AM435_RS03830 PF08241 Methyltransferase domain AM435_RS03860 PF01230 HIT domain AM435_RS03895 PF00005 ABC transporter AM435_RS03900 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM435_RS03910 PF02684 Lipid-A-disaccharide synthetase AM435_RS03935 PF01925 Sulfite exporter TauE/SafE AM435_RS03940 PF00793 DAHP synthetase I family AM435_RS03945 PF02654 Cobalamin-5-phosphate synthase AM435_RS03960 PF02277 Phosphoribosyltransferase AM435_RS03965 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AM435_RS04005 PF07715 TonB-dependent Receptor Plug Domain AM435_RS04005 PF00593 TonB dependent receptor AM435_RS04020 PF04183 IucA / IucC family AM435_RS04020 PF06276 Ferric iron reductase FhuF-like transporter AM435_RS04025 PF04183 IucA / IucC family AM435_RS04025 PF06276 Ferric iron reductase FhuF-like transporter AM435_RS04030 PF07690 Major Facilitator Superfamily AM435_RS04035 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AM435_RS04040 PF04183 IucA / IucC family AM435_RS04040 PF06276 Ferric iron reductase FhuF-like transporter AM435_RS04045 PF04073 Aminoacyl-tRNA editing domain AM435_RS04055 PF03109 ABC1 family AM435_RS04060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM435_RS04060 PF02770 Acyl-CoA dehydrogenase, middle domain AM435_RS04060 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM435_RS04065 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM435_RS04065 PF02770 Acyl-CoA dehydrogenase, middle domain AM435_RS04065 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM435_RS04070 PF00487 Fatty acid desaturase AM435_RS04075 PF12833 Helix-turn-helix domain AM435_RS04075 PF12852 Cupin AM435_RS04080 PF00639 PPIC-type PPIASE domain AM435_RS04080 PF09312 SurA N-terminal domain AM435_RS04085 PF00216 Bacterial DNA-binding protein AM435_RS04100 PF02082 Transcriptional regulator AM435_RS04105 PF00266 Aminotransferase class-V AM435_RS04110 PF01592 NifU-like N terminal domain AM435_RS04115 PF01521 Iron-sulphur cluster biosynthesis AM435_RS04120 PF07743 HSCB C-terminal oligomerisation domain AM435_RS04120 PF00226 DnaJ domain AM435_RS04125 PF00012 Hsp70 protein AM435_RS04130 PF00111 2Fe-2S iron-sulfur cluster binding domain AM435_RS04135 PF00211 Adenylate and Guanylate cyclase catalytic domain AM435_RS04145 PF00271 Helicase conserved C-terminal domain AM435_RS04145 PF00270 DEAD/DEAH box helicase AM435_RS04145 PF02559 CarD-like/TRCF domain AM435_RS04145 PF03461 TRCF domain AM435_RS04145 PF17757 UvrB interaction domain AM435_RS04165 PF03737 Aldolase/RraA AM435_RS04170 PF13460 NAD(P)H-binding AM435_RS04175 PF01649 Ribosomal protein S20 AM435_RS04185 PF00459 Inositol monophosphatase family AM435_RS04200 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM435_RS04200 PF00005 ABC transporter AM435_RS04210 PF00528 Binding-protein-dependent transport system inner membrane component AM435_RS04215 PF01432 Peptidase family M3 AM435_RS04235 PF00593 TonB dependent receptor AM435_RS04235 PF07715 TonB-dependent Receptor Plug Domain AM435_RS04245 PF01618 MotA/TolQ/ExbB proton channel family AM435_RS04250 PF02472 Biopolymer transport protein ExbD/TolR AM435_RS04275 PF01274 Malate synthase AM435_RS04280 PF03969 AFG1-like ATPase AM435_RS04290 PF00743 Flavin-binding monooxygenase-like AM435_RS04300 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AM435_RS04310 PF00216 Bacterial DNA-binding protein AM435_RS04315 PF00575 S1 RNA binding domain AM435_RS04320 PF02224 Cytidylate kinase AM435_RS04330 PF14437 MafB19-like deaminase AM435_RS04340 PF03167 Uracil DNA glycosylase superfamily AM435_RS04350 PF03934 Type II secretion system (T2SS), protein K AM435_RS04355 PF07963 Prokaryotic N-terminal methylation motif AM435_RS04355 PF11612 Type II secretion system (T2SS), protein J AM435_RS04360 PF07963 Prokaryotic N-terminal methylation motif AM435_RS04360 PF02501 Type II secretion system (T2SS), protein I AM435_RS04375 PF01026 TatD related DNase AM435_RS04385 PF09115 DNA polymerase III, delta subunit, C terminal AM435_RS04390 PF02348 Cytidylyltransferase AM435_RS04395 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AM435_RS04400 PF00005 ABC transporter AM435_RS04400 PF00664 ABC transporter transmembrane region AM435_RS04410 PF01618 MotA/TolQ/ExbB proton channel family AM435_RS04415 PF17762 HTH domain found in ParB protein AM435_RS04415 PF02195 ParB-like nuclease domain AM435_RS04420 PF13614 AAA domain AM435_RS04425 PF02527 rRNA small subunit methyltransferase G AM435_RS04430 PF00483 Nucleotidyl transferase AM435_RS04435 PF01636 Phosphotransferase enzyme family AM435_RS04440 PF04453 LPS transport system D AM435_RS04440 PF03968 OstA-like protein AM435_RS04445 PF09312 SurA N-terminal domain AM435_RS04445 PF00639 PPIC-type PPIASE domain AM435_RS04450 PF01116 Fructose-bisphosphate aldolase class-II AM435_RS04460 PF00162 Phosphoglycerate kinase AM435_RS04470 PF02545 Maf-like protein AM435_RS04475 PF08007 Cupin superfamily protein AM435_RS04490 PF00375 Sodium:dicarboxylate symporter family AM435_RS04495 PF06912 Protein of unknown function (DUF1275) AM435_RS04500 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) AM435_RS04505 PF00664 ABC transporter transmembrane region AM435_RS04505 PF00005 ABC transporter AM435_RS04515 PF12833 Helix-turn-helix domain AM435_RS04515 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AM435_RS04520 PF01597 Glycine cleavage H-protein AM435_RS04530 PF02146 Sir2 family AM435_RS04535 PF00474 Sodium:solute symporter family AM435_RS04540 PF01037 Lrp/AsnC ligand binding domain AM435_RS04545 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AM435_RS04545 PF14850 DNA-binding domain of Proline dehydrogenase AM435_RS04545 PF00171 Aldehyde dehydrogenase family AM435_RS04545 PF01619 Proline dehydrogenase AM435_RS04550 PF04229 GrpB protein AM435_RS04555 PF05958 tRNA (Uracil-5-)-methyltransferase AM435_RS04565 PF09992 Phosphodiester glycosidase AM435_RS04575 PF04264 YceI-like domain AM435_RS04585 PF02779 Transketolase, pyrimidine binding domain AM435_RS04585 PF02780 Transketolase, C-terminal domain AM435_RS04585 PF00456 Transketolase, thiamine diphosphate binding domain AM435_RS04590 PF02772 S-adenosylmethionine synthetase, central domain AM435_RS04590 PF02773 S-adenosylmethionine synthetase, C-terminal domain AM435_RS04590 PF00438 S-adenosylmethionine synthetase, N-terminal domain AM435_RS04610 PF00905 Penicillin binding protein transpeptidase domain AM435_RS04625 PF02075 Crossover junction endodeoxyribonuclease RuvC AM435_RS04630 PF01256 Carbohydrate kinase AM435_RS04630 PF03853 YjeF-related protein N-terminus AM435_RS04635 PF08331 Domain of unknown function (DUF1730) AM435_RS04640 PF06968 Biotin and Thiamin Synthesis associated domain AM435_RS04640 PF04055 Radical SAM superfamily AM435_RS04655 PF16970 Type-1 fimbrial protein, A AM435_RS04660 PF02753 Pili assembly chaperone PapD, C-terminal domain AM435_RS04660 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM435_RS04700 PF00892 EamA-like transporter family AM435_RS04710 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AM435_RS04720 PF03466 LysR substrate binding domain AM435_RS04720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM435_RS04745 PF00440 Bacterial regulatory proteins, tetR family AM435_RS04755 PF01709 Transcriptional regulator AM435_RS04760 PF01037 Lrp/AsnC ligand binding domain AM435_RS04770 PF00005 ABC transporter AM435_RS04775 PF00528 Binding-protein-dependent transport system inner membrane component AM435_RS04780 PF00528 Binding-protein-dependent transport system inner membrane component AM435_RS04805 PF00296 Luciferase-like monooxygenase AM435_RS04810 PF03180 NLPA lipoprotein AM435_RS04815 PF03180 NLPA lipoprotein AM435_RS04820 PF09383 NIL domain AM435_RS04820 PF00005 ABC transporter AM435_RS04825 PF00528 Binding-protein-dependent transport system inner membrane component AM435_RS04830 PF06071 Protein of unknown function (DUF933) AM435_RS04830 PF01926 50S ribosome-binding GTPase AM435_RS04860 PF03591 AzlC protein AM435_RS04865 PF05437 Branched-chain amino acid transport protein (AzlD) AM435_RS04875 PF02222 ATP-grasp domain AM435_RS04880 PF01966 HD domain AM435_RS04880 PF01909 Nucleotidyltransferase domain AM435_RS04880 PF08335 GlnD PII-uridylyltransferase AM435_RS04885 PF00155 Aminotransferase class I and II AM435_RS04895 PF12833 Helix-turn-helix domain AM435_RS04895 PF12852 Cupin AM435_RS04900 PF00255 Glutathione peroxidase AM435_RS04905 PF01641 SelR domain AM435_RS04910 PF00155 Aminotransferase class I and II AM435_RS04915 PF00375 Sodium:dicarboxylate symporter family AM435_RS04920 PF17763 Glutaminase/Asparaginase C-terminal domain AM435_RS04920 PF00710 Asparaginase, N-terminal AM435_RS04925 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AM435_RS04925 PF07733 Bacterial DNA polymerase III alpha NTPase domain AM435_RS04925 PF02811 PHP domain AM435_RS04925 PF14579 Helix-hairpin-helix motif AM435_RS04925 PF01336 OB-fold nucleic acid binding domain AM435_RS04930 PF00588 SpoU rRNA Methylase family AM435_RS04935 PF00132 Bacterial transferase hexapeptide (six repeats) AM435_RS04950 PF13192 Thioredoxin domain AM435_RS04950 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM435_RS04965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM435_RS04965 PF03466 LysR substrate binding domain AM435_RS04970 PF01758 Sodium Bile acid symporter family AM435_RS04975 PF01022 Bacterial regulatory protein, arsR family AM435_RS04980 PF03960 ArsC family AM435_RS04990 PF13382 Adenine deaminase C-terminal domain AM435_RS04990 PF01979 Amidohydrolase family AM435_RS05000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM435_RS05000 PF03466 LysR substrate binding domain AM435_RS05010 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AM435_RS05015 PF01177 Asp/Glu/Hydantoin racemase AM435_RS05020 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AM435_RS05025 PF00528 Binding-protein-dependent transport system inner membrane component AM435_RS05030 PF00005 ABC transporter AM435_RS05035 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AM435_RS05045 PF13737 Transposase DDE domain AM435_RS05055 PF00083 Sugar (and other) transporter AM435_RS05060 PF00296 Luciferase-like monooxygenase AM435_RS05065 PF02770 Acyl-CoA dehydrogenase, middle domain AM435_RS05065 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM435_RS05065 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AM435_RS05080 PF01654 Cytochrome bd terminal oxidase subunit I AM435_RS05085 PF02322 Cytochrome bd terminal oxidase subunit II AM435_RS05095 PF00155 Aminotransferase class I and II AM435_RS05095 PF00392 Bacterial regulatory proteins, gntR family AM435_RS05100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM435_RS05100 PF03466 LysR substrate binding domain AM435_RS05115 PF00698 Acyl transferase domain AM435_RS05120 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG AM435_RS05130 PF01039 Carboxyl transferase domain AM435_RS05135 PF06857 Malonate decarboxylase delta subunit (MdcD) AM435_RS05140 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AM435_RS05145 PF16957 Malonate decarboxylase, alpha subunit, transporter AM435_RS05150 PF07690 Major Facilitator Superfamily AM435_RS05165 PF00392 Bacterial regulatory proteins, gntR family AM435_RS05165 PF00155 Aminotransferase class I and II AM435_RS05170 PF04172 LrgB-like family AM435_RS05175 PF03788 LrgA family AM435_RS05180 PF03466 LysR substrate binding domain AM435_RS05180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM435_RS05185 PF02798 Glutathione S-transferase, N-terminal domain AM435_RS05185 PF14834 Glutathione S-transferase, C-terminal domain AM435_RS05190 PF02798 Glutathione S-transferase, N-terminal domain AM435_RS05195 PF03466 LysR substrate binding domain AM435_RS05195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM435_RS05205 PF00581 Rhodanese-like domain AM435_RS05210 PF00132 Bacterial transferase hexapeptide (six repeats) AM435_RS05220 PF00266 Aminotransferase class-V AM435_RS05230 PF01810 LysE type translocator AM435_RS05235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM435_RS05235 PF03466 LysR substrate binding domain AM435_RS05245 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM435_RS05250 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM435_RS05255 PF00005 ABC transporter AM435_RS05260 PF00528 Binding-protein-dependent transport system inner membrane component AM435_RS05265 PF00528 Binding-protein-dependent transport system inner membrane component AM435_RS05280 PF00072 Response regulator receiver domain AM435_RS05285 PF00072 Response regulator receiver domain AM435_RS05285 PF09308 LuxQ, periplasmic AM435_RS05285 PF00512 His Kinase A (phospho-acceptor) domain AM435_RS05285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM435_RS05295 PF01037 Lrp/AsnC ligand binding domain AM435_RS05295 PF13404 AsnC-type helix-turn-helix domain AM435_RS05305 PF00717 Peptidase S24-like AM435_RS05330 PF18011 C-terminal domain found in long catalases AM435_RS05330 PF00199 Catalase AM435_RS05330 PF06628 Catalase-related immune-responsive AM435_RS05340 PF00994 Probable molybdopterin binding domain AM435_RS05340 PF02464 Competence-damaged protein AM435_RS05340 PF18146 Damage-inducible protein CinA KH domain AM435_RS05370 PF03466 LysR substrate binding domain AM435_RS05370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM435_RS05390 PF13193 AMP-binding enzyme C-terminal domain AM435_RS05390 PF00501 AMP-binding enzyme AM435_RS05395 PF00440 Bacterial regulatory proteins, tetR family AM435_RS05400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM435_RS05400 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM435_RS05400 PF02770 Acyl-CoA dehydrogenase, middle domain AM435_RS05405 PF01039 Carboxyl transferase domain AM435_RS05410 PF00378 Enoyl-CoA hydratase/isomerase AM435_RS05415 PF02785 Biotin carboxylase C-terminal domain AM435_RS05415 PF00289 Biotin carboxylase, N-terminal domain AM435_RS05415 PF00364 Biotin-requiring enzyme AM435_RS05415 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM435_RS05415 PF18140 Propionyl-coenzyme A carboxylase BT domain AM435_RS05420 PF00682 HMGL-like AM435_RS05425 PF03466 LysR substrate binding domain AM435_RS05425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM435_RS05440 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM435_RS05440 PF02770 Acyl-CoA dehydrogenase, middle domain AM435_RS05440 PF12806 Acetyl-CoA dehydrogenase C-terminal like AM435_RS05440 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM435_RS05450 PF07690 Major Facilitator Superfamily AM435_RS05460 PF01144 Coenzyme A transferase AM435_RS05465 PF01144 Coenzyme A transferase AM435_RS05470 PF07690 Major Facilitator Superfamily AM435_RS05475 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM435_RS05475 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM435_RS05475 PF02770 Acyl-CoA dehydrogenase, middle domain AM435_RS05480 PF00378 Enoyl-CoA hydratase/isomerase AM435_RS05490 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM435_RS05490 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM435_RS05490 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain AM435_RS05495 PF02803 Thiolase, C-terminal domain AM435_RS05495 PF00108 Thiolase, N-terminal domain AM435_RS05500 PF09339 IclR helix-turn-helix domain AM435_RS05505 PF07690 Major Facilitator Superfamily AM435_RS05510 PF03060 Nitronate monooxygenase AM435_RS05515 PF00378 Enoyl-CoA hydratase/isomerase AM435_RS05520 PF09339 IclR helix-turn-helix domain AM435_RS05525 PF02515 CoA-transferase family III AM435_RS05530 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM435_RS05530 PF02770 Acyl-CoA dehydrogenase, middle domain AM435_RS05530 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM435_RS05535 PF07690 Major Facilitator Superfamily AM435_RS05540 PF13419 Haloacid dehalogenase-like hydrolase AM435_RS05545 PF00266 Aminotransferase class-V AM435_RS05550 PF01266 FAD dependent oxidoreductase AM435_RS05555 PF00528 Binding-protein-dependent transport system inner membrane component AM435_RS05560 PF00005 ABC transporter AM435_RS05560 PF08402 TOBE domain AM435_RS05570 PF00392 Bacterial regulatory proteins, gntR family AM435_RS05570 PF07702 UTRA domain AM435_RS05575 PF01494 FAD binding domain AM435_RS05580 PF01614 Bacterial transcriptional regulator AM435_RS05580 PF09339 IclR helix-turn-helix domain AM435_RS05585 PF02525 Flavodoxin-like fold AM435_RS05590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM435_RS05590 PF03466 LysR substrate binding domain AM435_RS05595 PF02627 Carboxymuconolactone decarboxylase family AM435_RS05600 PF00171 Aldehyde dehydrogenase family AM435_RS05610 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AM435_RS05620 PF00171 Aldehyde dehydrogenase family AM435_RS05625 PF00296 Luciferase-like monooxygenase AM435_RS05630 PF01613 Flavin reductase like domain AM435_RS05635 PF12697 Alpha/beta hydrolase family AM435_RS05655 PF01292 Prokaryotic cytochrome b561 AM435_RS05660 PF00199 Catalase AM435_RS05700 PF03061 Thioesterase superfamily AM435_RS05705 PF00132 Bacterial transferase hexapeptide (six repeats) AM435_RS05710 PF08223 PaaX-like protein C-terminal domain AM435_RS05710 PF07848 PaaX-like protein AM435_RS05715 PF14535 AMP-binding enzyme C-terminal domain AM435_RS05715 PF00501 AMP-binding enzyme AM435_RS05720 PF02803 Thiolase, C-terminal domain AM435_RS05720 PF00108 Thiolase, N-terminal domain AM435_RS05725 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain AM435_RS05725 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM435_RS05725 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM435_RS05730 PF00378 Enoyl-CoA hydratase/isomerase AM435_RS05735 PF00378 Enoyl-CoA hydratase/isomerase AM435_RS05740 PF00970 Oxidoreductase FAD-binding domain AM435_RS05740 PF00111 2Fe-2S iron-sulfur cluster binding domain AM435_RS05740 PF00175 Oxidoreductase NAD-binding domain AM435_RS05745 PF01883 Iron-sulfur cluster assembly protein AM435_RS05750 PF05138 Phenylacetic acid catabolic protein AM435_RS05755 PF06243 Phenylacetic acid degradation B AM435_RS05760 PF05138 Phenylacetic acid catabolic protein AM435_RS05765 PF00171 Aldehyde dehydrogenase family AM435_RS05765 PF01575 MaoC like domain AM435_RS05770 PF03313 Serine dehydratase alpha chain AM435_RS05770 PF03315 Serine dehydratase beta chain AM435_RS05775 PF13520 Amino acid permease AM435_RS05780 PF00171 Aldehyde dehydrogenase family AM435_RS05785 PF00083 Sugar (and other) transporter AM435_RS05805 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM435_RS05805 PF04324 BFD-like [2Fe-2S] binding domain AM435_RS05815 PF01266 FAD dependent oxidoreductase AM435_RS05820 PF05544 Proline racemase AM435_RS05825 PF00392 Bacterial regulatory proteins, gntR family AM435_RS05835 PF00701 Dihydrodipicolinate synthetase family AM435_RS05855 PF00376 MerR family regulatory protein AM435_RS05855 PF09278 MerR, DNA binding AM435_RS05865 PF02677 Epoxyqueuosine reductase QueH AM435_RS05880 PF07690 Major Facilitator Superfamily AM435_RS05885 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AM435_RS05895 PF03466 LysR substrate binding domain AM435_RS05895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM435_RS05915 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE AM435_RS05920 PF06812 ImpA, N-terminal, type VI secretion system AM435_RS05925 PF07724 AAA domain (Cdc48 subfamily) AM435_RS05925 PF00004 ATPase family associated with various cellular activities (AAA) AM435_RS05925 PF17871 AAA lid domain AM435_RS05925 PF10431 C-terminal, D2-small domain, of ClpB protein AM435_RS05935 PF00691 OmpA family AM435_RS05935 PF01389 OmpA-like transmembrane domain AM435_RS05945 PF06744 Type VI secretion protein IcmF C-terminal AM435_RS05945 PF14331 ImcF-related N-terminal domain AM435_RS05945 PF06761 Intracellular multiplication and human macrophage-killing AM435_RS05960 PF05947 Type VI secretion system, TssF AM435_RS06005 PF00005 ABC transporter AM435_RS06010 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM435_RS06015 PF01425 Amidase AM435_RS06020 PF01402 Ribbon-helix-helix protein, copG family AM435_RS06020 PF08753 NikR C terminal nickel binding domain AM435_RS06040 PF02525 Flavodoxin-like fold AM435_RS06045 PF00289 Biotin carboxylase, N-terminal domain AM435_RS06045 PF02785 Biotin carboxylase C-terminal domain AM435_RS06045 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM435_RS06060 PF08240 Alcohol dehydrogenase GroES-like domain AM435_RS06060 PF13823 Alcohol dehydrogenase GroES-associated AM435_RS06060 PF00107 Zinc-binding dehydrogenase AM435_RS06070 PF00440 Bacterial regulatory proteins, tetR family AM435_RS06095 PF00654 Voltage gated chloride channel AM435_RS06100 PF02785 Biotin carboxylase C-terminal domain AM435_RS06100 PF00289 Biotin carboxylase, N-terminal domain AM435_RS06100 PF00364 Biotin-requiring enzyme AM435_RS06100 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM435_RS06110 PF07286 Protein of unknown function (DUF1445) AM435_RS06115 PF03746 LamB/YcsF family AM435_RS06120 PF01566 Natural resistance-associated macrophage protein AM435_RS06125 PF03466 LysR substrate binding domain AM435_RS06125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM435_RS06140 PF05593 RHS Repeat AM435_RS06140 PF03527 RHS protein AM435_RS06145 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) AM435_RS06145 PF13296 Putative type VI secretion system Rhs element Vgr AM435_RS06145 PF04717 Type VI secretion system, phage-baseplate injector AM435_RS06160 PF13419 Haloacid dehalogenase-like hydrolase AM435_RS06180 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM435_RS06180 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM435_RS06200 PF07690 Major Facilitator Superfamily AM435_RS06210 PF03279 Bacterial lipid A biosynthesis acyltransferase AM435_RS06215 PF03707 Bacterial signalling protein N terminal repeat AM435_RS06215 PF00990 Diguanylate cyclase, GGDEF domain AM435_RS06215 PF00563 EAL domain AM435_RS06220 PF00892 EamA-like transporter family AM435_RS06225 PF01037 Lrp/AsnC ligand binding domain AM435_RS06230 PF01624 MutS domain I AM435_RS06230 PF05190 MutS family domain IV AM435_RS06230 PF00488 MutS domain V AM435_RS06230 PF05188 MutS domain II AM435_RS06230 PF05192 MutS domain III AM435_RS06240 PF11953 Domain of unknown function (DUF3470) AM435_RS06240 PF00037 4Fe-4S binding domain AM435_RS06250 PF01596 O-methyltransferase AM435_RS06260 PF00132 Bacterial transferase hexapeptide (six repeats) AM435_RS06265 PF01205 Uncharacterized protein family UPF0029 AM435_RS06275 PF03412 Peptidase C39 family AM435_RS06275 PF00005 ABC transporter AM435_RS06275 PF00664 ABC transporter transmembrane region AM435_RS06285 PF12399 Branched-chain amino acid ATP-binding cassette transporter AM435_RS06285 PF00005 ABC transporter AM435_RS06290 PF03968 OstA-like protein AM435_RS06305 PF00571 CBS domain AM435_RS06305 PF01380 SIS domain AM435_RS06310 PF01406 tRNA synthetases class I (C) catalytic domain AM435_RS06310 PF09190 DALR domain AM435_RS06340 PF01638 HxlR-like helix-turn-helix AM435_RS06345 PF07690 Major Facilitator Superfamily AM435_RS06385 PF03807 NADP oxidoreductase coenzyme F420-dependent AM435_RS06385 PF14748 Pyrroline-5-carboxylate reductase dimerisation AM435_RS06395 PF00313 'Cold-shock' DNA-binding domain AM435_RS06400 PF01810 LysE type translocator AM435_RS06435 PF02601 Exonuclease VII, large subunit AM435_RS06435 PF13742 OB-fold nucleic acid binding domain AM435_RS06475 PF09278 MerR, DNA binding AM435_RS06475 PF00376 MerR family regulatory protein AM435_RS06480 PF00403 Heavy-metal-associated domain AM435_RS06490 PF03466 LysR substrate binding domain AM435_RS06490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM435_RS06495 PF00355 Rieske [2Fe-2S] domain AM435_RS06495 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AM435_RS06500 PF00866 Ring hydroxylating beta subunit AM435_RS06505 PF00175 Oxidoreductase NAD-binding domain AM435_RS06505 PF00111 2Fe-2S iron-sulfur cluster binding domain AM435_RS06505 PF00970 Oxidoreductase FAD-binding domain AM435_RS06510 PF00106 short chain dehydrogenase AM435_RS06515 PF03594 Benzoate membrane transport protein AM435_RS06520 PF07690 Major Facilitator Superfamily AM435_RS06530 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AM435_RS06530 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AM435_RS06535 PF11898 Domain of unknown function (DUF3418) AM435_RS06535 PF00271 Helicase conserved C-terminal domain AM435_RS06535 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AM435_RS06535 PF00270 DEAD/DEAH box helicase AM435_RS06535 PF04408 Helicase associated domain (HA2) AM435_RS06540 PF10417 C-terminal domain of 1-Cys peroxiredoxin AM435_RS06540 PF00578 AhpC/TSA family AM435_RS06560 PF13192 Thioredoxin domain AM435_RS06560 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM435_RS06570 PF02798 Glutathione S-transferase, N-terminal domain AM435_RS06570 PF00043 Glutathione S-transferase, C-terminal domain AM435_RS06580 PF02390 Putative methyltransferase AM435_RS06585 PF13417 Glutathione S-transferase, N-terminal domain AM435_RS06585 PF00043 Glutathione S-transferase, C-terminal domain AM435_RS06595 PF00691 OmpA family AM435_RS06595 PF13488 Glycine zipper AM435_RS06600 PF01979 Amidohydrolase family AM435_RS06605 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AM435_RS06605 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AM435_RS06615 PF01170 Putative RNA methylase family UPF0020 AM435_RS06615 PF10672 S-adenosylmethionine-dependent methyltransferase AM435_RS06615 PF02926 THUMP domain AM435_RS06630 PF10431 C-terminal, D2-small domain, of ClpB protein AM435_RS06630 PF17871 AAA lid domain AM435_RS06630 PF07724 AAA domain (Cdc48 subfamily) AM435_RS06630 PF00004 ATPase family associated with various cellular activities (AAA) AM435_RS06630 PF02861 Clp amino terminal domain, pathogenicity island component AM435_RS06645 PF02566 OsmC-like protein AM435_RS06650 PF00027 Cyclic nucleotide-binding domain AM435_RS06650 PF13545 Crp-like helix-turn-helix domain AM435_RS06655 PF00248 Aldo/keto reductase family AM435_RS06670 PF00709 Adenylosuccinate synthetase AM435_RS06675 PF13393 Histidyl-tRNA synthetase AM435_RS06680 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AM435_RS06680 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AM435_RS06685 PF01411 tRNA synthetases class II (A) AM435_RS06685 PF02272 DHHA1 domain AM435_RS06685 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AM435_RS06690 PF13840 ACT domain AM435_RS06690 PF00696 Amino acid kinase family AM435_RS06690 PF01842 ACT domain AM435_RS06695 PF02599 Global regulator protein family AM435_RS06700 PF01351 Ribonuclease HII AM435_RS06710 PF01292 Prokaryotic cytochrome b561 AM435_RS06715 PF00962 Adenosine/AMP deaminase AM435_RS06720 PF00860 Permease family AM435_RS06735 PF13610 DDE domain AM435_RS06745 PF02522 Aminoglycoside 3-N-acetyltransferase AM435_RS06780 PF13610 DDE domain AM435_RS06785 PF01636 Phosphotransferase enzyme family AM435_RS06800 PF13610 DDE domain AM435_RS06810 PF04072 Leucine carboxyl methyltransferase AM435_RS06815 PF03466 LysR substrate binding domain AM435_RS06815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM435_RS06820 PF07690 Major Facilitator Superfamily AM435_RS06825 PF05681 Fumarate hydratase (Fumerase) AM435_RS06830 PF05683 Fumarase C-terminus AM435_RS06835 PF12833 Helix-turn-helix domain AM435_RS06835 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AM435_RS06840 PF00743 Flavin-binding monooxygenase-like AM435_RS06845 PF00106 short chain dehydrogenase AM435_RS06850 PF07859 alpha/beta hydrolase fold AM435_RS06855 PF05199 GMC oxidoreductase AM435_RS06860 PF03573 outer membrane porin, OprD family AM435_RS06865 PF07690 Major Facilitator Superfamily AM435_RS06875 PF03781 Sulfatase-modifying factor enzyme 1 AM435_RS06885 PF00355 Rieske [2Fe-2S] domain AM435_RS06890 PF00111 2Fe-2S iron-sulfur cluster binding domain AM435_RS06890 PF00175 Oxidoreductase NAD-binding domain AM435_RS06905 PF07690 Major Facilitator Superfamily AM435_RS06910 PF00378 Enoyl-CoA hydratase/isomerase AM435_RS06915 PF00171 Aldehyde dehydrogenase family AM435_RS06925 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM435_RS06925 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM435_RS06925 PF02770 Acyl-CoA dehydrogenase, middle domain AM435_RS06930 PF03573 outer membrane porin, OprD family AM435_RS06945 PF07519 Tannase and feruloyl esterase AM435_RS06950 PF00392 Bacterial regulatory proteins, gntR family AM435_RS06950 PF07729 FCD domain AM435_RS06955 PF00171 Aldehyde dehydrogenase family AM435_RS06960 PF00701 Dihydrodipicolinate synthetase family AM435_RS06965 PF13378 Enolase C-terminal domain-like AM435_RS06970 PF07690 Major Facilitator Superfamily AM435_RS06975 PF08666 SAF domain AM435_RS06975 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AM435_RS06980 PF00892 EamA-like transporter family AM435_RS06985 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AM435_RS06985 PF12833 Helix-turn-helix domain AM435_RS06990 PF00171 Aldehyde dehydrogenase family AM435_RS06995 PF00324 Amino acid permease AM435_RS07000 PF13737 Transposase DDE domain AM435_RS07005 PF00324 Amino acid permease AM435_RS07010 PF04958 Arginine N-succinyltransferase beta subunit AM435_RS07015 PF00202 Aminotransferase class-III AM435_RS07025 PF00171 Aldehyde dehydrogenase family AM435_RS07035 PF07729 FCD domain AM435_RS07035 PF00392 Bacterial regulatory proteins, gntR family AM435_RS07045 PF00324 Amino acid permease AM435_RS07050 PF01266 FAD dependent oxidoreductase AM435_RS07060 PF13737 Transposase DDE domain AM435_RS07080 PF03527 RHS protein AM435_RS07080 PF05593 RHS Repeat AM435_RS07085 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) AM435_RS07085 PF13296 Putative type VI secretion system Rhs element Vgr AM435_RS07085 PF04717 Type VI secretion system, phage-baseplate injector AM435_RS07100 PF03180 NLPA lipoprotein AM435_RS07105 PF05987 Bacterial protein of unknown function (DUF898) AM435_RS07120 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM435_RS07120 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM435_RS07125 PF00764 Arginosuccinate synthase AM435_RS07130 PF00563 EAL domain AM435_RS07130 PF00990 Diguanylate cyclase, GGDEF domain AM435_RS07130 PF00360 Phytochrome region AM435_RS07130 PF01590 GAF domain AM435_RS07135 PF01979 Amidohydrolase family AM435_RS07140 PF00929 Exonuclease AM435_RS07150 PF00593 TonB dependent receptor AM435_RS07150 PF07715 TonB-dependent Receptor Plug Domain AM435_RS07155 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM435_RS07155 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM435_RS07160 PF00005 ABC transporter AM435_RS07160 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM435_RS07165 PF12911 N-terminal TM domain of oligopeptide transport permease C AM435_RS07165 PF00528 Binding-protein-dependent transport system inner membrane component AM435_RS07170 PF00528 Binding-protein-dependent transport system inner membrane component AM435_RS07175 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM435_RS07180 PF01476 LysM domain AM435_RS07180 PF01464 Transglycosylase SLT domain AM435_RS07180 PF01464 Transglycosylase SLT domain AM435_RS07180 PF01476 LysM domain AM435_RS07185 PF00929 Exonuclease AM435_RS07195 PF09297 NADH pyrophosphatase zinc ribbon domain AM435_RS07195 PF00293 NUDIX domain AM435_RS07205 PF04972 BON domain AM435_RS07210 PF02021 Uncharacterised protein family UPF0102 AM435_RS07215 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM435_RS07225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM435_RS07225 PF03466 LysR substrate binding domain AM435_RS07230 PF01810 LysE type translocator AM435_RS07240 PF13411 MerR HTH family regulatory protein AM435_RS07250 PF01494 FAD binding domain AM435_RS07255 PF01494 FAD binding domain AM435_RS07260 PF00557 Metallopeptidase family M24 AM435_RS07260 PF05195 Aminopeptidase P, N-terminal domain AM435_RS07295 PF08019 Phosphoethanolamine transferase EptA/EptB AM435_RS07295 PF00884 Sulfatase AM435_RS07300 PF13737 Transposase DDE domain AM435_RS07345 PF01551 Peptidase family M23 AM435_RS07345 PF01476 LysM domain AM435_RS07345 PF08525 Opacity-associated protein A N-terminal motif AM435_RS07675 PF00117 Glutamine amidotransferase class-I AM435_RS07680 PF11838 ERAP1-like C-terminal domain AM435_RS07680 PF01433 Peptidase family M1 domain AM435_RS07685 PF00593 TonB dependent receptor AM435_RS07685 PF07715 TonB-dependent Receptor Plug Domain AM435_RS07690 PF00591 Glycosyl transferase family, a/b domain AM435_RS07690 PF02885 Glycosyl transferase family, helical bundle domain AM435_RS07695 PF00218 Indole-3-glycerol phosphate synthase AM435_RS07710 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AM435_RS07710 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AM435_RS07715 PF01799 [2Fe-2S] binding domain AM435_RS07715 PF00111 2Fe-2S iron-sulfur cluster binding domain AM435_RS07720 PF01227 GTP cyclohydrolase I AM435_RS07730 PF00144 Beta-lactamase AM435_RS07745 PF05675 Protein of unknown function (DUF817) AM435_RS07750 PF01208 Uroporphyrinogen decarboxylase (URO-D) AM435_RS07760 PF00425 chorismate binding enzyme AM435_RS07770 PF00975 Thioesterase domain AM435_RS07775 PF00005 ABC transporter AM435_RS07780 PF00005 ABC transporter AM435_RS07790 PF00282 Pyridoxal-dependent decarboxylase conserved domain AM435_RS07795 PF00550 Phosphopantetheine attachment site AM435_RS07795 PF00857 Isochorismatase family AM435_RS07800 PF13193 AMP-binding enzyme C-terminal domain AM435_RS07800 PF00501 AMP-binding enzyme AM435_RS07805 PF00550 Phosphopantetheine attachment site AM435_RS07805 PF00668 Condensation domain AM435_RS07805 PF00501 AMP-binding enzyme AM435_RS07810 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AM435_RS07815 PF07715 TonB-dependent Receptor Plug Domain AM435_RS07815 PF00593 TonB dependent receptor AM435_RS07820 PF01497 Periplasmic binding protein AM435_RS07825 PF00005 ABC transporter AM435_RS07830 PF01032 FecCD transport family AM435_RS07835 PF01032 FecCD transport family AM435_RS07840 PF00975 Thioesterase domain AM435_RS07840 PF00550 Phosphopantetheine attachment site AM435_RS07840 PF00668 Condensation domain AM435_RS07840 PF13193 AMP-binding enzyme C-terminal domain AM435_RS07840 PF00501 AMP-binding enzyme AM435_RS07845 PF00550 Phosphopantetheine attachment site AM435_RS07845 PF00501 AMP-binding enzyme AM435_RS07845 PF00668 Condensation domain AM435_RS07845 PF13193 AMP-binding enzyme C-terminal domain AM435_RS07855 PF13309 HTH domain AM435_RS07855 PF08348 YheO-like PAS domain AM435_RS07865 PF02678 Pirin AM435_RS07865 PF17954 Quercetinase C-terminal cupin domain AM435_RS07885 PF00440 Bacterial regulatory proteins, tetR family AM435_RS07890 PF00109 Beta-ketoacyl synthase, N-terminal domain AM435_RS07890 PF16197 Ketoacyl-synthetase C-terminal extension AM435_RS07890 PF09277 Erythronolide synthase, docking AM435_RS07890 PF08990 Erythronolide synthase docking AM435_RS07890 PF02801 Beta-ketoacyl synthase, C-terminal domain AM435_RS07890 PF08659 KR domain AM435_RS07890 PF00550 Phosphopantetheine attachment site AM435_RS07890 PF00698 Acyl transferase domain AM435_RS07890 PF08240 Alcohol dehydrogenase GroES-like domain AM435_RS07890 PF14765 Polyketide synthase dehydratase AM435_RS07895 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AM435_RS07895 PF13378 Enolase C-terminal domain-like AM435_RS07900 PF00083 Sugar (and other) transporter AM435_RS07905 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system AM435_RS07915 PF00892 EamA-like transporter family AM435_RS07935 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AM435_RS07935 PF01266 FAD dependent oxidoreductase AM435_RS07940 PF18113 Rubredoxin binding C-terminal domain AM435_RS07940 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM435_RS07945 PF00171 Aldehyde dehydrogenase family AM435_RS07950 PF00355 Rieske [2Fe-2S] domain AM435_RS07950 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AM435_RS07955 PF02028 BCCT, betaine/carnitine/choline family transporter AM435_RS07960 PF13737 Transposase DDE domain AM435_RS07970 PF03466 LysR substrate binding domain AM435_RS07970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM435_RS07975 PF00324 Amino acid permease AM435_RS07980 PF00171 Aldehyde dehydrogenase family AM435_RS07995 PF06018 CodY GAF-like domain AM435_RS07995 PF13556 PucR C-terminal helix-turn-helix domain AM435_RS07995 PF17853 GGDEF-like domain AM435_RS08035 PF04328 Selenoprotein, putative AM435_RS08040 PF02554 Carbon starvation protein CstA AM435_RS08040 PF13722 5TM C-terminal transporter carbon starvation CstA AM435_RS08045 PF08207 Elongation factor P (EF-P) KOW-like domain AM435_RS08045 PF01132 Elongation factor P (EF-P) OB domain AM435_RS08045 PF09285 Elongation factor P, C-terminal AM435_RS08050 PF04055 Radical SAM superfamily AM435_RS08065 PF01197 Ribosomal protein L31 AM435_RS08070 PF13593 SBF-like CPA transporter family (DUF4137) AM435_RS08075 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM435_RS08080 PF07690 Major Facilitator Superfamily AM435_RS08085 PF13654 AAA domain AM435_RS08085 PF05362 Lon protease (S16) C-terminal proteolytic domain AM435_RS08090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM435_RS08090 PF03466 LysR substrate binding domain AM435_RS08095 PF01476 LysM domain AM435_RS08095 PF01551 Peptidase family M23 AM435_RS08100 PF01975 Survival protein SurE AM435_RS08115 PF00768 D-alanyl-D-alanine carboxypeptidase AM435_RS08115 PF07943 Penicillin-binding protein 5, C-terminal domain AM435_RS08120 PF00132 Bacterial transferase hexapeptide (six repeats) AM435_RS08125 PF00293 NUDIX domain AM435_RS08125 PF13344 Haloacid dehalogenase-like hydrolase AM435_RS08135 PF04356 Protein of unknown function (DUF489) AM435_RS08140 PF08328 Adenylosuccinate lyase C-terminal AM435_RS08140 PF00206 Lyase AM435_RS08155 PF08496 Peptidase family S49 N-terminal AM435_RS08155 PF01343 Peptidase family S49 AM435_RS08160 PF00005 ABC transporter AM435_RS08165 PF00528 Binding-protein-dependent transport system inner membrane component AM435_RS08170 PF00528 Binding-protein-dependent transport system inner membrane component AM435_RS08175 PF12849 PBP superfamily domain AM435_RS08180 PF00324 Amino acid permease AM435_RS08185 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM435_RS08185 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM435_RS08185 PF00205 Thiamine pyrophosphate enzyme, central domain AM435_RS08190 PF01037 Lrp/AsnC ligand binding domain AM435_RS08195 PF00171 Aldehyde dehydrogenase family AM435_RS08200 PF00282 Pyridoxal-dependent decarboxylase conserved domain AM435_RS08205 PF00202 Aminotransferase class-III AM435_RS08215 PF17754 MftR C-terminal domain AM435_RS08215 PF00440 Bacterial regulatory proteins, tetR family AM435_RS08225 PF00487 Fatty acid desaturase AM435_RS08230 PF00970 Oxidoreductase FAD-binding domain AM435_RS08230 PF00111 2Fe-2S iron-sulfur cluster binding domain AM435_RS08230 PF00175 Oxidoreductase NAD-binding domain AM435_RS08235 PF00440 Bacterial regulatory proteins, tetR family AM435_RS08245 PF00271 Helicase conserved C-terminal domain AM435_RS08245 PF12137 RNA polymerase recycling family C-terminal AM435_RS08245 PF00176 SNF2 family N-terminal domain AM435_RS08245 PF18339 RapA N-terminal Tudor like domain 1 AM435_RS08245 PF18337 RapA N-terminal Tudor like domain AM435_RS08250 PF00849 RNA pseudouridylate synthase AM435_RS08260 PF00202 Aminotransferase class-III AM435_RS08265 PF02581 Thiamine monophosphate synthase AM435_RS08290 PF00675 Insulinase (Peptidase family M16) AM435_RS08290 PF05193 Peptidase M16 inactive domain AM435_RS08295 PF02567 Phenazine biosynthesis-like protein AM435_RS08300 PF00375 Sodium:dicarboxylate symporter family AM435_RS08305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM435_RS08305 PF03466 LysR substrate binding domain AM435_RS08310 PF06779 Uncharacterised MFS-type transporter YbfB AM435_RS08330 PF00180 Isocitrate/isopropylmalate dehydrogenase AM435_RS08335 PF00849 RNA pseudouridylate synthase AM435_RS08340 PF03971 Monomeric isocitrate dehydrogenase AM435_RS08350 PF07943 Penicillin-binding protein 5, C-terminal domain AM435_RS08350 PF00768 D-alanyl-D-alanine carboxypeptidase AM435_RS08355 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM435_RS08360 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM435_RS08365 PF03441 FAD binding domain of DNA photolyase AM435_RS08365 PF00875 DNA photolyase AM435_RS08395 PF02350 UDP-N-acetylglucosamine 2-epimerase AM435_RS08410 PF03060 Nitronate monooxygenase AM435_RS08415 PF01207 Dihydrouridine synthase (Dus) AM435_RS08420 PF07759 Protein of unknown function (DUF1615) AM435_RS08430 PF00696 Amino acid kinase family AM435_RS08430 PF01472 PUA domain AM435_RS08435 PF01926 50S ribosome-binding GTPase AM435_RS08435 PF01018 GTP1/OBG AM435_RS08450 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AM435_RS08450 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AM435_RS08455 PF00892 EamA-like transporter family AM435_RS08465 PF12344 Ultra-violet resistance protein B AM435_RS08465 PF17757 UvrB interaction domain AM435_RS08465 PF00271 Helicase conserved C-terminal domain AM435_RS08465 PF02151 UvrB/uvrC motif AM435_RS08465 PF04851 Type III restriction enzyme, res subunit AM435_RS08475 PF17151 Periplasmic sensor domain AM435_RS08475 PF00990 Diguanylate cyclase, GGDEF domain AM435_RS08485 PF00155 Aminotransferase class I and II AM435_RS08530 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) AM435_RS08535 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AM435_RS08540 PF11967 Recombination protein O N terminal AM435_RS08540 PF02565 Recombination protein O C terminal AM435_RS08550 PF07650 KH domain AM435_RS08550 PF01926 50S ribosome-binding GTPase AM435_RS08555 PF00035 Double-stranded RNA binding motif AM435_RS08555 PF14622 Ribonuclease-III-like AM435_RS08565 PF10502 Signal peptidase, peptidase S26 AM435_RS08570 PF00679 Elongation factor G C-terminus AM435_RS08570 PF00009 Elongation factor Tu GTP binding domain AM435_RS08570 PF06421 GTP-binding protein LepA C-terminus AM435_RS08570 PF03144 Elongation factor Tu domain 2 AM435_RS08580 PF13180 PDZ domain AM435_RS08585 PF00890 FAD binding domain AM435_RS08585 PF02910 Fumarate reductase flavoprotein C-term AM435_RS08595 PF02223 Thymidylate kinase AM435_RS08600 PF02618 YceG-like family AM435_RS08605 PF01063 Amino-transferase class IV AM435_RS08620 PF00528 Binding-protein-dependent transport system inner membrane component AM435_RS08625 PF00528 Binding-protein-dependent transport system inner membrane component AM435_RS08630 PF00005 ABC transporter AM435_RS08630 PF12857 TOBE-like domain AM435_RS08635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM435_RS08635 PF03466 LysR substrate binding domain AM435_RS08645 PF14602 Hexapeptide repeat of succinyl-transferase AM435_RS08645 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AM435_RS08645 PF00132 Bacterial transferase hexapeptide (six repeats) AM435_RS08655 PF06508 Queuosine biosynthesis protein QueC AM435_RS08670 PF00578 AhpC/TSA family AM435_RS08680 PF00293 NUDIX domain AM435_RS08680 PF01467 Cytidylyltransferase-like AM435_RS08685 PF00378 Enoyl-CoA hydratase/isomerase AM435_RS08690 PF01784 NIF3 (NGG1p interacting factor 3) AM435_RS08695 PF07690 Major Facilitator Superfamily AM435_RS08700 PF02769 AIR synthase related protein, C-terminal domain AM435_RS08700 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AM435_RS08700 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AM435_RS08705 PF01966 HD domain AM435_RS08710 PF07499 RuvA, C-terminal domain AM435_RS08710 PF01330 RuvA N terminal domain AM435_RS08715 PF17864 RuvB AAA lid domain AM435_RS08715 PF05491 RuvB C-terminal winged helix domain AM435_RS08715 PF05496 Holliday junction DNA helicase RuvB P-loop domain AM435_RS08720 PF01546 Peptidase family M20/M25/M40 AM435_RS08720 PF07687 Peptidase dimerisation domain AM435_RS08725 PF03061 Thioesterase superfamily AM435_RS08730 PF01618 MotA/TolQ/ExbB proton channel family AM435_RS08735 PF02472 Biopolymer transport protein ExbD/TolR AM435_RS08745 PF07676 WD40-like Beta Propeller Repeat AM435_RS08745 PF04052 TolB amino-terminal domain AM435_RS08750 PF00691 OmpA family AM435_RS08760 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AM435_RS08765 PF00588 SpoU rRNA Methylase family AM435_RS08765 PF08032 RNA 2'-O ribose methyltransferase substrate binding AM435_RS08805 PF00308 Bacterial dnaA protein AM435_RS08805 PF11638 DnaA N-terminal domain AM435_RS08805 PF08299 Bacterial dnaA protein helix-turn-helix AM435_RS08810 PF01594 AI-2E family transporter AM435_RS08815 PF02769 AIR synthase related protein, C-terminal domain AM435_RS08815 PF00586 AIR synthase related protein, N-terminal domain AM435_RS08820 PF00551 Formyl transferase AM435_RS08825 PF12697 Alpha/beta hydrolase family AM435_RS08830 PF01343 Peptidase family S49 AM435_RS08830 PF06965 Na+/H+ antiporter 1 AM435_RS08840 PF03772 Competence protein AM435_RS08840 PF13567 Domain of unknown function (DUF4131) AM435_RS08840 PF00753 Metallo-beta-lactamase superfamily AM435_RS08845 PF00005 ABC transporter AM435_RS08850 PF02687 FtsX-like permease family AM435_RS08850 PF12704 MacB-like periplasmic core domain AM435_RS08860 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AM435_RS08870 PF00266 Aminotransferase class-V AM435_RS08880 PF13533 Biotin-lipoyl like AM435_RS08900 PF00535 Glycosyl transferase family 2 AM435_RS08915 PF00521 DNA gyrase/topoisomerase IV, subunit A AM435_RS08915 PF03989 DNA gyrase C-terminal domain, beta-propeller AM435_RS08920 PF01012 Electron transfer flavoprotein domain AM435_RS08920 PF00766 Electron transfer flavoprotein FAD-binding domain AM435_RS08925 PF01012 Electron transfer flavoprotein domain AM435_RS08930 PF02899 Phage integrase, N-terminal SAM-like domain AM435_RS08930 PF00589 Phage integrase family AM435_RS08935 PF01810 LysE type translocator AM435_RS08940 PF01678 Diaminopimelate epimerase AM435_RS08945 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AM435_RS08945 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AM435_RS08955 PF00324 Amino acid permease AM435_RS08960 PF18073 Rubredoxin metal binding domain AM435_RS08970 PF00152 tRNA synthetases class II (D, K and N) AM435_RS08975 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM435_RS08975 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM435_RS08975 PF11890 Domain of unknown function (DUF3410) AM435_RS08980 PF06803 Protein of unknown function (DUF1232) AM435_RS08985 PF02634 FdhD/NarQ family AM435_RS08990 PF00384 Molybdopterin oxidoreductase AM435_RS08995 PF02595 Glycerate kinase family AM435_RS09010 PF00881 Nitroreductase family AM435_RS09035 PF00550 Phosphopantetheine attachment site AM435_RS09035 PF00668 Condensation domain AM435_RS09035 PF00975 Thioesterase domain AM435_RS09035 PF13193 AMP-binding enzyme C-terminal domain AM435_RS09035 PF00501 AMP-binding enzyme AM435_RS09050 PF01272 Transcription elongation factor, GreA/GreB, C-term AM435_RS09050 PF03449 Transcription elongation factor, N-terminal AM435_RS09055 PF01464 Transglycosylase SLT domain AM435_RS09055 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM435_RS09065 PF01171 PP-loop family AM435_RS09075 PF01464 Transglycosylase SLT domain AM435_RS09080 PF01435 Peptidase family M48 AM435_RS09090 PF00873 AcrB/AcrD/AcrF family AM435_RS09095 PF03009 Glycerophosphoryl diester phosphodiesterase family AM435_RS09100 PF00753 Metallo-beta-lactamase superfamily AM435_RS09105 PF01219 Prokaryotic diacylglycerol kinase AM435_RS09110 PF00118 TCP-1/cpn60 chaperonin family AM435_RS09115 PF00166 Chaperonin 10 Kd subunit AM435_RS09125 PF00149 Calcineurin-like phosphoesterase AM435_RS09130 PF00781 Diacylglycerol kinase catalytic domain AM435_RS09135 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain AM435_RS09135 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain AM435_RS09140 PF01266 FAD dependent oxidoreductase AM435_RS09140 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AM435_RS09145 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM435_RS09145 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM435_RS09150 PF00083 Sugar (and other) transporter AM435_RS09165 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AM435_RS09165 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AM435_RS09180 PF09423 PhoD-like phosphatase AM435_RS09180 PF16655 PhoD-like phosphatase, N-terminal domain AM435_RS09200 PF00809 Pterin binding enzyme AM435_RS09205 PF01434 Peptidase family M41 AM435_RS09205 PF17862 AAA+ lid domain AM435_RS09205 PF00004 ATPase family associated with various cellular activities (AAA) AM435_RS09205 PF06480 FtsH Extracellular AM435_RS09210 PF01728 FtsJ-like methyltransferase AM435_RS09215 PF01985 CRS1 / YhbY (CRM) domain AM435_RS09230 PF00117 Glutamine amidotransferase class-I AM435_RS09230 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AM435_RS09235 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AM435_RS09235 PF02142 MGS-like domain AM435_RS09235 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM435_RS09240 PF01272 Transcription elongation factor, GreA/GreB, C-term AM435_RS09240 PF03449 Transcription elongation factor, N-terminal AM435_RS09245 PF00132 Bacterial transferase hexapeptide (six repeats) AM435_RS09250 PF00582 Universal stress protein family AM435_RS09255 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AM435_RS09265 PF09587 Bacterial capsule synthesis protein PGA_cap AM435_RS09280 PF00999 Sodium/hydrogen exchanger family AM435_RS09285 PF04228 Putative neutral zinc metallopeptidase AM435_RS09290 PF05661 Protein of unknown function (DUF808) AM435_RS09295 PF00579 tRNA synthetases class I (W and Y) AM435_RS09300 PF02629 CoA binding domain AM435_RS09300 PF00549 CoA-ligase AM435_RS09305 PF00549 CoA-ligase AM435_RS09305 PF08442 ATP-grasp domain AM435_RS09310 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM435_RS09310 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM435_RS09315 PF02817 e3 binding domain AM435_RS09315 PF00364 Biotin-requiring enzyme AM435_RS09315 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AM435_RS09320 PF16078 2-oxoglutarate dehydrogenase N-terminus AM435_RS09320 PF00676 Dehydrogenase E1 component AM435_RS09320 PF16870 2-oxoglutarate dehydrogenase C-terminal AM435_RS09320 PF02779 Transketolase, pyrimidine binding domain AM435_RS09335 PF13085 2Fe-2S iron-sulfur cluster binding domain AM435_RS09340 PF02910 Fumarate reductase flavoprotein C-term AM435_RS09340 PF00890 FAD binding domain AM435_RS09345 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AM435_RS09350 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AM435_RS09355 PF00285 Citrate synthase, C-terminal domain AM435_RS09365 PF17773 UPF0176 acylphosphatase like domain AM435_RS09365 PF00581 Rhodanese-like domain AM435_RS09385 PF00140 Sigma-70 factor, region 1.2 AM435_RS09385 PF04542 Sigma-70 region 2 AM435_RS09385 PF03979 Sigma-70 factor, region 1.1 AM435_RS09385 PF04545 Sigma-70, region 4 AM435_RS09385 PF04539 Sigma-70 region 3 AM435_RS09385 PF04546 Sigma-70, non-essential region AM435_RS09390 PF04359 Protein of unknown function (DUF493) AM435_RS09395 PF03099 Biotin/lipoate A/B protein ligase family AM435_RS09405 PF00465 Iron-containing alcohol dehydrogenase AM435_RS09410 PF13520 Amino acid permease AM435_RS09415 PF03358 NADPH-dependent FMN reductase AM435_RS09420 PF01638 HxlR-like helix-turn-helix AM435_RS09425 PF00588 SpoU rRNA Methylase family AM435_RS09430 PF10414 Sirohaem synthase dimerisation region AM435_RS09430 PF14824 Sirohaem biosynthesis protein central AM435_RS09430 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM435_RS09435 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM435_RS09435 PF02403 Seryl-tRNA synthetase N-terminal domain AM435_RS09445 PF03548 Outer membrane lipoprotein carrier protein LolA AM435_RS09450 PF01016 Ribosomal L27 protein AM435_RS09455 PF00829 Ribosomal prokaryotic L21 protein AM435_RS09465 PF00348 Polyprenyl synthetase AM435_RS09475 PF01569 PAP2 superfamily AM435_RS09480 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM435_RS09480 PF00529 HlyD membrane-fusion protein of T1SS AM435_RS09485 PF00873 AcrB/AcrD/AcrF family AM435_RS09490 PF02321 Outer membrane efflux protein AM435_RS09495 PF01906 Putative heavy-metal-binding AM435_RS09500 PF01906 Putative heavy-metal-binding AM435_RS09520 PF00133 tRNA synthetases class I (I, L, M and V) AM435_RS09520 PF10458 Valyl tRNA synthetase tRNA binding arm AM435_RS09520 PF08264 Anticodon-binding domain of tRNA AM435_RS09540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM435_RS09540 PF03466 LysR substrate binding domain AM435_RS09550 PF00909 Ammonium Transporter Family AM435_RS09560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM435_RS09560 PF08521 Two-component sensor kinase N-terminal AM435_RS09560 PF00512 His Kinase A (phospho-acceptor) domain AM435_RS09565 PF00072 Response regulator receiver domain AM435_RS09565 PF00486 Transcriptional regulatory protein, C terminal AM435_RS09570 PF08019 Phosphoethanolamine transferase EptA/EptB AM435_RS09570 PF00884 Sulfatase AM435_RS09590 PF01734 Patatin-like phospholipase AM435_RS09600 PF01145 SPFH domain / Band 7 family AM435_RS09605 PF04237 YjbR AM435_RS09610 PF00348 Polyprenyl synthetase AM435_RS09615 PF04303 PrpF protein AM435_RS09620 PF00324 Amino acid permease AM435_RS09630 PF00589 Phage integrase family AM435_RS09630 PF13356 Arm DNA-binding domain AM435_RS10025 PF01965 DJ-1/PfpI family AM435_RS10030 PF08990 Erythronolide synthase docking AM435_RS10030 PF08240 Alcohol dehydrogenase GroES-like domain AM435_RS10030 PF00698 Acyl transferase domain AM435_RS10030 PF14765 Polyketide synthase dehydratase AM435_RS10030 PF09277 Erythronolide synthase, docking AM435_RS10030 PF00550 Phosphopantetheine attachment site AM435_RS10030 PF08659 KR domain AM435_RS10030 PF02801 Beta-ketoacyl synthase, C-terminal domain AM435_RS10030 PF16197 Ketoacyl-synthetase C-terminal extension AM435_RS10030 PF00109 Beta-ketoacyl synthase, N-terminal domain AM435_RS10035 PF12833 Helix-turn-helix domain AM435_RS10035 PF06719 AraC-type transcriptional regulator N-terminus AM435_RS10040 PF02673 Bacitracin resistance protein BacA AM435_RS10060 PF02525 Flavodoxin-like fold AM435_RS10075 PF01507 Phosphoadenosine phosphosulfate reductase family AM435_RS10080 PF06974 Protein of unknown function (DUF1298) AM435_RS10080 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain AM435_RS10090 PF00575 S1 RNA binding domain AM435_RS10090 PF10150 Ribonuclease E/G family AM435_RS10095 PF02545 Maf-like protein AM435_RS10100 PF04093 rod shape-determining protein MreD AM435_RS10105 PF04085 rod shape-determining protein MreC AM435_RS10115 PF02686 Glu-tRNAGln amidotransferase C subunit AM435_RS10120 PF01425 Amidase AM435_RS10125 PF02637 GatB domain AM435_RS10125 PF02934 GatB/GatE catalytic domain AM435_RS10155 PF05992 SbmA/BacA-like family AM435_RS10160 PF00291 Pyridoxal-phosphate dependent enzyme AM435_RS10160 PF13291 ACT domain AM435_RS10165 PF01734 Patatin-like phospholipase AM435_RS10170 PF01235 Sodium:alanine symporter family AM435_RS10185 PF00881 Nitroreductase family AM435_RS10190 PF07690 Major Facilitator Superfamily AM435_RS10195 PF12805 FUSC-like inner membrane protein yccS AM435_RS10205 PF00258 Flavodoxin AM435_RS10205 PF00667 FAD binding domain AM435_RS10205 PF00175 Oxidoreductase NAD-binding domain AM435_RS10245 PF17969 L,D-transpeptidase C-terminal domain AM435_RS10245 PF03734 L,D-transpeptidase catalytic domain AM435_RS10250 PF04304 Protein of unknown function (DUF454) AM435_RS10260 PF08085 Entericidin EcnA/B family AM435_RS10265 PF01546 Peptidase family M20/M25/M40 AM435_RS10265 PF07687 Peptidase dimerisation domain AM435_RS10275 PF01627 Hpt domain AM435_RS10275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM435_RS10275 PF01584 CheW-like domain AM435_RS10275 PF00072 Response regulator receiver domain AM435_RS10280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM435_RS10280 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AM435_RS10285 PF01584 CheW-like domain AM435_RS10290 PF00072 Response regulator receiver domain AM435_RS10295 PF00072 Response regulator receiver domain AM435_RS10310 PF00873 AcrB/AcrD/AcrF family AM435_RS10315 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM435_RS10315 PF03129 Anticodon binding domain AM435_RS10315 PF04073 Aminoacyl-tRNA editing domain AM435_RS10320 PF07411 Domain of unknown function (DUF1508) AM435_RS10325 PF03831 PhnA domain AM435_RS10325 PF08274 PhnA Zinc-Ribbon AM435_RS10330 PF04343 Protein of unknown function, DUF488 AM435_RS10340 PF01571 Aminomethyltransferase folate-binding domain AM435_RS10345 PF10411 Disulfide bond isomerase protein N-terminus AM435_RS10345 PF13098 Thioredoxin-like domain AM435_RS10360 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM435_RS10365 PF00593 TonB dependent receptor AM435_RS10365 PF07715 TonB-dependent Receptor Plug Domain AM435_RS10370 PF02245 Methylpurine-DNA glycosylase (MPG) AM435_RS10375 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AM435_RS10375 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AM435_RS10375 PF06827 Zinc finger found in FPG and IleRS AM435_RS10390 PF01741 Large-conductance mechanosensitive channel, MscL AM435_RS10395 PF00009 Elongation factor Tu GTP binding domain AM435_RS10395 PF00679 Elongation factor G C-terminus AM435_RS10395 PF03144 Elongation factor Tu domain 2 AM435_RS10400 PF00860 Permease family AM435_RS10405 PF08468 Methyltransferase small domain N-terminal AM435_RS10405 PF05175 Methyltransferase small domain AM435_RS10410 PF00324 Amino acid permease AM435_RS10415 PF01139 tRNA-splicing ligase RtcB AM435_RS10425 PF13505 Outer membrane protein beta-barrel domain AM435_RS10425 PF00691 OmpA family AM435_RS10435 PF02803 Thiolase, C-terminal domain AM435_RS10435 PF00108 Thiolase, N-terminal domain AM435_RS10445 PF00893 Small Multidrug Resistance protein AM435_RS10455 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AM435_RS10455 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AM435_RS10460 PF01011 PQQ enzyme repeat AM435_RS10465 PF04966 Carbohydrate-selective porin, OprB family AM435_RS10470 PF02515 CoA-transferase family III AM435_RS10475 PF12833 Helix-turn-helix domain AM435_RS10475 PF02311 AraC-like ligand binding domain AM435_RS10480 PF02803 Thiolase, C-terminal domain AM435_RS10480 PF00108 Thiolase, N-terminal domain AM435_RS10485 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM435_RS10485 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM435_RS10485 PF00378 Enoyl-CoA hydratase/isomerase AM435_RS10510 PF03006 Haemolysin-III related AM435_RS10515 PF00083 Sugar (and other) transporter AM435_RS10515 PF07690 Major Facilitator Superfamily AM435_RS10525 PF02810 SEC-C motif AM435_RS10525 PF07516 SecA Wing and Scaffold domain AM435_RS10525 PF07517 SecA DEAD-like domain AM435_RS10525 PF01043 SecA preprotein cross-linking domain AM435_RS10530 PF10417 C-terminal domain of 1-Cys peroxiredoxin AM435_RS10530 PF00578 AhpC/TSA family AM435_RS10535 PF00753 Metallo-beta-lactamase superfamily AM435_RS10550 PF02875 Mur ligase family, glutamate ligase domain AM435_RS10550 PF08245 Mur ligase middle domain AM435_RS10555 PF01039 Carboxyl transferase domain AM435_RS10560 PF00290 Tryptophan synthase alpha chain AM435_RS10585 PF00291 Pyridoxal-phosphate dependent enzyme AM435_RS10590 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AM435_RS10595 PF07715 TonB-dependent Receptor Plug Domain AM435_RS10595 PF00593 TonB dependent receptor AM435_RS10600 PF01923 Cobalamin adenosyltransferase AM435_RS10620 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AM435_RS10625 PF00486 Transcriptional regulatory protein, C terminal AM435_RS10625 PF00072 Response regulator receiver domain AM435_RS10630 PF00672 HAMP domain AM435_RS10630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM435_RS10630 PF00512 His Kinase A (phospho-acceptor) domain AM435_RS10640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM435_RS10640 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM435_RS10640 PF02770 Acyl-CoA dehydrogenase, middle domain AM435_RS10640 PF12806 Acetyl-CoA dehydrogenase C-terminal like AM435_RS10645 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM435_RS10645 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM435_RS10645 PF12806 Acetyl-CoA dehydrogenase C-terminal like AM435_RS10645 PF02770 Acyl-CoA dehydrogenase, middle domain AM435_RS10650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM435_RS10650 PF03466 LysR substrate binding domain AM435_RS10655 PF02798 Glutathione S-transferase, N-terminal domain AM435_RS10655 PF00043 Glutathione S-transferase, C-terminal domain AM435_RS10660 PF06146 Phosphate-starvation-inducible E AM435_RS10680 PF07715 TonB-dependent Receptor Plug Domain AM435_RS10680 PF00593 TonB dependent receptor AM435_RS10700 PF02938 GAD domain AM435_RS10700 PF00152 tRNA synthetases class II (D, K and N) AM435_RS10700 PF01336 OB-fold nucleic acid binding domain AM435_RS10705 PF17102 Stealth protein CR3, conserved region 3 AM435_RS10705 PF11380 Stealth protein CR2, conserved region 2 AM435_RS10705 PF17101 Stealth protein CR1, conserved region 1 AM435_RS10740 PF13439 Glycosyltransferase Family 4 AM435_RS10740 PF00534 Glycosyl transferases group 1 AM435_RS10745 PF00535 Glycosyl transferase family 2 AM435_RS10750 PF01522 Polysaccharide deacetylase AM435_RS10765 PF01063 Amino-transferase class IV AM435_RS10770 PF03710 Glutamate-ammonia ligase adenylyltransferase AM435_RS10770 PF08335 GlnD PII-uridylyltransferase AM435_RS10775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM435_RS10775 PF07689 KaiB domain AM435_RS10775 PF00512 His Kinase A (phospho-acceptor) domain AM435_RS10780 PF13737 Transposase DDE domain AM435_RS10800 PF02547 Queuosine biosynthesis protein AM435_RS10815 PF01702 Queuine tRNA-ribosyltransferase AM435_RS10820 PF02699 Preprotein translocase subunit AM435_RS10825 PF13721 SecD export protein N-terminal TM region AM435_RS10825 PF07549 SecD/SecF GG Motif AM435_RS10825 PF02355 Protein export membrane protein AM435_RS10830 PF02355 Protein export membrane protein AM435_RS10830 PF07549 SecD/SecF GG Motif AM435_RS10835 PF02441 Flavoprotein AM435_RS10835 PF04127 DNA / pantothenate metabolism flavoprotein AM435_RS10840 PF04002 RadC-like JAB domain AM435_RS10845 PF01062 Bestrophin, RFP-TM, chloride channel AM435_RS10850 PF02811 PHP domain AM435_RS10855 PF04279 Intracellular septation protein A AM435_RS10860 PF03795 YCII-related domain AM435_RS10870 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AM435_RS10870 PF01266 FAD dependent oxidoreductase AM435_RS10880 PF04461 Protein of unknown function (DUF520) AM435_RS10890 PF03061 Thioesterase superfamily AM435_RS10895 PF00085 Thioredoxin AM435_RS10900 PF00561 alpha/beta hydrolase fold AM435_RS10905 PF00753 Metallo-beta-lactamase superfamily AM435_RS10905 PF04273 Putative phosphatase (DUF442) AM435_RS10915 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM435_RS10915 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM435_RS10965 PF01389 OmpA-like transmembrane domain AM435_RS10965 PF00691 OmpA family AM435_RS10970 PF00149 Calcineurin-like phosphoesterase AM435_RS10970 PF10518 TAT (twin-arginine translocation) pathway signal sequence AM435_RS10975 PF13091 PLD-like domain AM435_RS11005 PF00149 Calcineurin-like phosphoesterase AM435_RS11010 PF00398 Ribosomal RNA adenine dimethylase AM435_RS11015 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AM435_RS11020 PF00572 Ribosomal protein L13 AM435_RS11025 PF00380 Ribosomal protein S9/S16 AM435_RS11030 PF13417 Glutathione S-transferase, N-terminal domain AM435_RS11030 PF00043 Glutathione S-transferase, C-terminal domain AM435_RS11035 PF04386 Stringent starvation protein B AM435_RS11045 PF02785 Biotin carboxylase C-terminal domain AM435_RS11045 PF00364 Biotin-requiring enzyme AM435_RS11045 PF00289 Biotin carboxylase, N-terminal domain AM435_RS11045 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM435_RS11055 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM435_RS11055 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM435_RS11055 PF02770 Acyl-CoA dehydrogenase, middle domain AM435_RS11060 PF01039 Carboxyl transferase domain AM435_RS11075 PF00440 Bacterial regulatory proteins, tetR family AM435_RS11075 PF17932 Tetracyclin repressor-like, C-terminal domain AM435_RS11080 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM435_RS11080 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM435_RS11080 PF02770 Acyl-CoA dehydrogenase, middle domain AM435_RS11125 PF01066 CDP-alcohol phosphatidyltransferase AM435_RS11130 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AM435_RS11150 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AM435_RS11150 PF00056 lactate/malate dehydrogenase, NAD binding domain AM435_RS11160 PF01464 Transglycosylase SLT domain AM435_RS11160 PF10145 Phage-related minor tail protein AM435_RS11160 PF01551 Peptidase family M23 AM435_RS11165 PF04055 Radical SAM superfamily AM435_RS11165 PF01938 TRAM domain AM435_RS11165 PF00919 Uncharacterized protein family UPF0004 AM435_RS11170 PF02562 PhoH-like protein AM435_RS11175 PF02130 Uncharacterized protein family UPF0054 AM435_RS11200 PF03358 NADPH-dependent FMN reductase AM435_RS11205 PF03631 Virulence factor BrkB AM435_RS11210 PF00892 EamA-like transporter family AM435_RS11215 PF12833 Helix-turn-helix domain AM435_RS11220 PF01557 Fumarylacetoacetate (FAA) hydrolase family AM435_RS11265 PF00773 RNB domain AM435_RS11265 PF00575 S1 RNA binding domain AM435_RS11265 PF08206 Ribonuclease B OB domain AM435_RS11265 PF17876 Cold shock domain AM435_RS11265 PF08461 Ribonuclease R winged-helix domain AM435_RS11270 PF01432 Peptidase family M3 AM435_RS11275 PF09526 Probable metal-binding protein (DUF2387) AM435_RS11305 PF03937 Flavinator of succinate dehydrogenase AM435_RS11310 PF02770 Acyl-CoA dehydrogenase, middle domain AM435_RS11310 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM435_RS11310 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM435_RS11315 PF00743 Flavin-binding monooxygenase-like AM435_RS11320 PF01196 Ribosomal protein L17 AM435_RS11325 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AM435_RS11325 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AM435_RS11325 PF01000 RNA polymerase Rpb3/RpoA insert domain AM435_RS11330 PF00163 Ribosomal protein S4/S9 N-terminal domain AM435_RS11330 PF01479 S4 domain AM435_RS11335 PF00411 Ribosomal protein S11 AM435_RS11340 PF00416 Ribosomal protein S13/S18 AM435_RS11345 PF00444 Ribosomal protein L36 AM435_RS11350 PF00344 SecY translocase AM435_RS11355 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AM435_RS11360 PF00327 Ribosomal protein L30p/L7e AM435_RS11365 PF03719 Ribosomal protein S5, C-terminal domain AM435_RS11365 PF00333 Ribosomal protein S5, N-terminal domain AM435_RS11370 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AM435_RS11375 PF00347 Ribosomal protein L6 AM435_RS11380 PF00410 Ribosomal protein S8 AM435_RS11385 PF00253 Ribosomal protein S14p/S29e AM435_RS11390 PF00281 Ribosomal protein L5 AM435_RS11390 PF00673 ribosomal L5P family C-terminus AM435_RS11395 PF00467 KOW motif AM435_RS11395 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AM435_RS11400 PF00238 Ribosomal protein L14p/L23e AM435_RS11405 PF00366 Ribosomal protein S17 AM435_RS11410 PF00831 Ribosomal L29 protein AM435_RS11415 PF00252 Ribosomal protein L16p/L10e AM435_RS11420 PF00189 Ribosomal protein S3, C-terminal domain AM435_RS11420 PF07650 KH domain AM435_RS11425 PF00237 Ribosomal protein L22p/L17e AM435_RS11430 PF00203 Ribosomal protein S19 AM435_RS11435 PF03947 Ribosomal Proteins L2, C-terminal domain AM435_RS11435 PF00181 Ribosomal Proteins L2, RNA binding domain AM435_RS11440 PF00276 Ribosomal protein L23 AM435_RS11445 PF00573 Ribosomal protein L4/L1 family AM435_RS11450 PF00297 Ribosomal protein L3 AM435_RS11455 PF00338 Ribosomal protein S10p/S20e AM435_RS11460 PF00117 Glutamine amidotransferase class-I AM435_RS11465 PF01053 Cys/Met metabolism PLP-dependent enzyme AM435_RS11470 PF05872 Bacterial protein of unknown function (DUF853) AM435_RS11475 PF00175 Oxidoreductase NAD-binding domain AM435_RS11475 PF00042 Globin AM435_RS11475 PF00970 Oxidoreductase FAD-binding domain AM435_RS11480 PF02082 Transcriptional regulator AM435_RS11485 PF01926 50S ribosome-binding GTPase AM435_RS11495 PF00375 Sodium:dicarboxylate symporter family AM435_RS11505 PF01553 Acyltransferase AM435_RS11520 PF00270 DEAD/DEAH box helicase AM435_RS11520 PF17191 RecG wedge domain AM435_RS11520 PF00271 Helicase conserved C-terminal domain AM435_RS11525 PF00156 Phosphoribosyl transferase domain AM435_RS11530 PF00293 NUDIX domain AM435_RS11535 PF03641 Possible lysine decarboxylase AM435_RS11540 PF01544 CorA-like Mg2+ transporter protein AM435_RS11550 PF05494 MlaC protein AM435_RS11560 PF02405 Permease MlaE AM435_RS11565 PF00005 ABC transporter AM435_RS11575 PF03880 DbpA RNA binding domain AM435_RS11575 PF00270 DEAD/DEAH box helicase AM435_RS11575 PF00271 Helicase conserved C-terminal domain AM435_RS11575 PF12343 Cold shock protein DEAD box A AM435_RS11580 PF00459 Inositol monophosphatase family AM435_RS11585 PF02779 Transketolase, pyrimidine binding domain AM435_RS11585 PF02780 Transketolase, C-terminal domain AM435_RS11585 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AM435_RS11590 PF00925 GTP cyclohydrolase II AM435_RS11595 PF01218 Coproporphyrinogen III oxidase AM435_RS11600 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AM435_RS11600 PF01488 Shikimate / quinate 5-dehydrogenase AM435_RS11600 PF08501 Shikimate dehydrogenase substrate binding domain AM435_RS11610 PF02770 Acyl-CoA dehydrogenase, middle domain AM435_RS11610 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM435_RS11610 PF12806 Acetyl-CoA dehydrogenase C-terminal like AM435_RS11610 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM435_RS11620 PF04024 PspC domain AM435_RS11625 PF00571 CBS domain AM435_RS11650 PF02091 Glycyl-tRNA synthetase alpha subunit AM435_RS11655 PF02092 Glycyl-tRNA synthetase beta subunit AM435_RS11655 PF05746 DALR anticodon binding domain AM435_RS11665 PF00892 EamA-like transporter family AM435_RS11670 PF03466 LysR substrate binding domain AM435_RS11670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM435_RS11685 PF05922 Peptidase inhibitor I9 AM435_RS11685 PF00082 Subtilase family AM435_RS11700 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AM435_RS11705 PF04996 Succinylarginine dihydrolase AM435_RS11710 PF00171 Aldehyde dehydrogenase family AM435_RS11715 PF04958 Arginine N-succinyltransferase beta subunit AM435_RS11720 PF00202 Aminotransferase class-III AM435_RS11725 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AM435_RS11725 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AM435_RS11730 PF00324 Amino acid permease AM435_RS11760 PF13614 AAA domain AM435_RS11765 PF01594 AI-2E family transporter AM435_RS11770 PF00080 Copper/zinc superoxide dismutase (SODC) AM435_RS11775 PF12805 FUSC-like inner membrane protein yccS AM435_RS11780 PF07690 Major Facilitator Superfamily AM435_RS11790 PF02525 Flavodoxin-like fold AM435_RS11795 PF03992 Antibiotic biosynthesis monooxygenase AM435_RS11805 PF02913 FAD linked oxidases, C-terminal domain AM435_RS11805 PF01565 FAD binding domain AM435_RS11810 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM435_RS11810 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM435_RS11815 PF00892 EamA-like transporter family AM435_RS11820 PF00892 EamA-like transporter family AM435_RS11830 PF01925 Sulfite exporter TauE/SafE AM435_RS11835 PF09157 Pseudouridine synthase II TruB, C-terminal AM435_RS11835 PF01509 TruB family pseudouridylate synthase (N terminal domain) AM435_RS11835 PF16198 tRNA pseudouridylate synthase B C-terminal domain AM435_RS11840 PF03280 Proteobacterial lipase chaperone protein AM435_RS11845 PF00561 alpha/beta hydrolase fold AM435_RS11850 PF01245 Ribosomal protein L19 AM435_RS11855 PF01746 tRNA (Guanine-1)-methyltransferase AM435_RS11860 PF01782 RimM N-terminal domain AM435_RS11860 PF05239 PRC-barrel domain AM435_RS11865 PF00886 Ribosomal protein S16 AM435_RS11905 PF02401 LytB protein AM435_RS11910 PF00625 Guanylate kinase AM435_RS11915 PF01192 RNA polymerase Rpb6 AM435_RS11925 PF02824 TGS domain AM435_RS11925 PF04607 Region found in RelA / SpoT proteins AM435_RS11925 PF13291 ACT domain AM435_RS11935 PF01042 Endoribonuclease L-PSP AM435_RS11940 PF04324 BFD-like [2Fe-2S] binding domain AM435_RS11945 PF00210 Ferritin-like domain AM435_RS11950 PF11846 Virulence factor membrane-bound polymerase, C-terminal AM435_RS11950 PF04932 O-Antigen ligase AM435_RS11950 PF15864 Protein glycosylation ligase AM435_RS11960 PF07963 Prokaryotic N-terminal methylation motif AM435_RS11960 PF00114 Pilin (bacterial filament) AM435_RS11970 PF04536 TPM domain AM435_RS11975 PF04011 LemA family AM435_RS11985 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM435_RS11985 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AM435_RS11990 PF01645 Conserved region in glutamate synthase AM435_RS11990 PF04898 Glutamate synthase central domain AM435_RS11990 PF00310 Glutamine amidotransferases class-II AM435_RS11990 PF01493 GXGXG motif AM435_RS12000 PF01761 3-dehydroquinate synthase AM435_RS12005 PF01202 Shikimate kinase AM435_RS12010 PF07660 Secretin and TonB N terminus short domain AM435_RS12010 PF00263 Bacterial type II and III secretion system protein AM435_RS12010 PF11741 AMIN domain AM435_RS12010 PF03958 Bacterial type II/III secretion system short domain AM435_RS12020 PF04350 Pilus assembly protein, PilO AM435_RS12025 PF05137 Fimbrial assembly protein (PilN) AM435_RS12030 PF11104 Type IV pilus assembly protein PilM; AM435_RS12035 PF00905 Penicillin binding protein transpeptidase domain AM435_RS12035 PF00912 Transglycosylase AM435_RS12035 PF17092 Penicillin-binding protein OB-like domain AM435_RS12040 PF13847 Methyltransferase domain AM435_RS12050 PF00953 Glycosyl transferase family 4 AM435_RS12055 PF08245 Mur ligase middle domain AM435_RS12055 PF02875 Mur ligase family, glutamate ligase domain AM435_RS12055 PF01225 Mur ligase family, catalytic domain AM435_RS12060 PF02875 Mur ligase family, glutamate ligase domain AM435_RS12060 PF08245 Mur ligase middle domain AM435_RS12060 PF01225 Mur ligase family, catalytic domain AM435_RS12065 PF00905 Penicillin binding protein transpeptidase domain AM435_RS12065 PF03717 Penicillin-binding Protein dimerisation domain AM435_RS12075 PF01795 MraW methylase family AM435_RS12090 PF00749 tRNA synthetases class I (E and Q), catalytic domain AM435_RS12105 PF00324 Amino acid permease AM435_RS12130 PF01545 Cation efflux family AM435_RS12135 PF00873 AcrB/AcrD/AcrF family AM435_RS12140 PF00529 HlyD membrane-fusion protein of T1SS AM435_RS12140 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM435_RS12165 PF00005 ABC transporter AM435_RS12165 PF12848 ABC transporter AM435_RS12170 PF01053 Cys/Met metabolism PLP-dependent enzyme AM435_RS12175 PF00106 short chain dehydrogenase AM435_RS12180 PF00916 Sulfate permease family AM435_RS12180 PF01740 STAS domain AM435_RS12185 PF17674 HHH domain AM435_RS12185 PF00575 S1 RNA binding domain AM435_RS12185 PF09371 Tex-like protein N-terminal domain AM435_RS12185 PF16921 Tex protein YqgF-like domain AM435_RS12190 PF00486 Transcriptional regulatory protein, C terminal AM435_RS12190 PF00072 Response regulator receiver domain AM435_RS12195 PF00672 HAMP domain AM435_RS12195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM435_RS12195 PF00512 His Kinase A (phospho-acceptor) domain AM435_RS12205 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AM435_RS12205 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AM435_RS12210 PF00583 Acetyltransferase (GNAT) family AM435_RS12230 PF00475 Imidazoleglycerol-phosphate dehydratase AM435_RS12235 PF00117 Glutamine amidotransferase class-I AM435_RS12250 PF00977 Histidine biosynthesis protein AM435_RS12275 PF01636 Phosphotransferase enzyme family AM435_RS12280 PF00977 Histidine biosynthesis protein AM435_RS12295 PF00230 Major intrinsic protein AM435_RS12320 PF02705 K+ potassium transporter AM435_RS12330 PF12833 Helix-turn-helix domain AM435_RS12350 PF02525 Flavodoxin-like fold AM435_RS12360 PF01638 HxlR-like helix-turn-helix AM435_RS12375 PF01638 HxlR-like helix-turn-helix AM435_RS12400 PF02311 AraC-like ligand binding domain AM435_RS12400 PF12833 Helix-turn-helix domain AM435_RS12405 PF00248 Aldo/keto reductase family AM435_RS12430 PF03466 LysR substrate binding domain AM435_RS12430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM435_RS12435 PF07690 Major Facilitator Superfamily AM435_RS12455 PF01593 Flavin containing amine oxidoreductase AM435_RS12460 PF02678 Pirin AM435_RS12460 PF05726 Pirin C-terminal cupin domain AM435_RS12465 PF00857 Isochorismatase family AM435_RS12470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM435_RS12475 PF00171 Aldehyde dehydrogenase family AM435_RS12480 PF00202 Aminotransferase class-III AM435_RS12485 PF00155 Aminotransferase class I and II AM435_RS12485 PF00392 Bacterial regulatory proteins, gntR family AM435_RS12490 PF00324 Amino acid permease AM435_RS12500 PF03591 AzlC protein AM435_RS12510 PF00436 Single-strand binding protein family AM435_RS12515 PF07690 Major Facilitator Superfamily AM435_RS12525 PF02581 Thiamine monophosphate synthase AM435_RS12525 PF03070 TENA/THI-4/PQQC family AM435_RS12525 PF08543 Phosphomethylpyrimidine kinase AM435_RS12530 PF06942 GlpM protein AM435_RS12540 PF00107 Zinc-binding dehydrogenase AM435_RS12540 PF08240 Alcohol dehydrogenase GroES-like domain AM435_RS12545 PF00440 Bacterial regulatory proteins, tetR family AM435_RS12545 PF16925 Tetracyclin repressor-like, C-terminal domain AM435_RS12550 PF00005 ABC transporter AM435_RS12550 PF17760 UvrA interaction domain AM435_RS12550 PF17755 UvrA DNA-binding domain AM435_RS12565 PF02028 BCCT, betaine/carnitine/choline family transporter AM435_RS12575 PF00474 Sodium:solute symporter family AM435_RS12580 PF04341 Protein of unknown function, DUF485 AM435_RS12585 PF00512 His Kinase A (phospho-acceptor) domain AM435_RS12585 PF00072 Response regulator receiver domain AM435_RS12585 PF01627 Hpt domain AM435_RS12585 PF00672 HAMP domain AM435_RS12585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM435_RS12595 PF00072 Response regulator receiver domain AM435_RS12595 PF00196 Bacterial regulatory proteins, luxR family AM435_RS12600 PF03358 NADPH-dependent FMN reductase AM435_RS12605 PF00296 Luciferase-like monooxygenase AM435_RS12610 PF01037 Lrp/AsnC ligand binding domain AM435_RS12615 PF00857 Isochorismatase family AM435_RS12620 PF13193 AMP-binding enzyme C-terminal domain AM435_RS12620 PF16177 Acetyl-coenzyme A synthetase N-terminus AM435_RS12620 PF00501 AMP-binding enzyme AM435_RS12630 PF00924 Mechanosensitive ion channel AM435_RS12635 PF04452 RNA methyltransferase AM435_RS12640 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AM435_RS12645 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM435_RS12665 PF01368 DHH family AM435_RS12665 PF02272 DHHA1 domain AM435_RS12665 PF17768 RecJ OB domain AM435_RS12670 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AM435_RS12670 PF01243 Pyridoxamine 5'-phosphate oxidase AM435_RS12675 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM435_RS12675 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM435_RS12675 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM435_RS12675 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM435_RS12680 PF00571 CBS domain AM435_RS12680 PF00478 IMP dehydrogenase / GMP reductase domain AM435_RS12685 PF03692 Putative zinc- or iron-chelating domain AM435_RS12690 PF00258 Flavodoxin AM435_RS12690 PF01613 Flavin reductase like domain AM435_RS12695 PF07715 TonB-dependent Receptor Plug Domain AM435_RS12695 PF00593 TonB dependent receptor AM435_RS12700 PF01169 Uncharacterized protein family UPF0016 AM435_RS12710 PF02817 e3 binding domain AM435_RS12710 PF00364 Biotin-requiring enzyme AM435_RS12710 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AM435_RS12715 PF17831 Pyruvate dehydrogenase E1 component middle domain AM435_RS12715 PF00456 Transketolase, thiamine diphosphate binding domain AM435_RS12720 PF01551 Peptidase family M23 AM435_RS12730 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AM435_RS12735 PF12327 FtsZ family, C-terminal domain AM435_RS12735 PF00091 Tubulin/FtsZ family, GTPase domain AM435_RS12740 PF02491 SHS2 domain inserted in FTSA AM435_RS12745 PF03799 Cell division protein FtsQ AM435_RS12745 PF08478 POTRA domain, FtsQ-type AM435_RS12750 PF01820 D-ala D-ala ligase N-terminus AM435_RS12750 PF07478 D-ala D-ala ligase C-terminus AM435_RS12755 PF02875 Mur ligase family, glutamate ligase domain AM435_RS12755 PF08245 Mur ligase middle domain AM435_RS12755 PF01225 Mur ligase family, catalytic domain AM435_RS12760 PF03033 Glycosyltransferase family 28 N-terminal domain AM435_RS12760 PF04101 Glycosyltransferase family 28 C-terminal domain AM435_RS12765 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AM435_RS12765 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AM435_RS12790 PF00809 Pterin binding enzyme AM435_RS12795 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM435_RS12795 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM435_RS12795 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM435_RS12795 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM435_RS12810 PF00665 Integrase core domain AM435_RS12830 PF00156 Phosphoribosyl transferase domain AM435_RS12835 PF03372 Endonuclease/Exonuclease/phosphatase family AM435_RS12840 PF03960 ArsC family AM435_RS12850 PF07859 alpha/beta hydrolase fold AM435_RS12860 PF02683 Cytochrome C biogenesis protein transmembrane region AM435_RS12860 PF11412 Disulphide bond corrector protein DsbC AM435_RS12890 PF00576 HIUase/Transthyretin family AM435_RS12895 PF00860 Permease family AM435_RS12905 PF01494 FAD binding domain AM435_RS12910 PF03561 Allantoicase repeat AM435_RS12915 PF04115 Ureidoglycolate lyase AM435_RS12920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM435_RS12920 PF00204 DNA gyrase B AM435_RS12920 PF01751 Toprim domain AM435_RS12920 PF00986 DNA gyrase B subunit, carboxyl terminus AM435_RS12925 PF05728 Uncharacterised protein family (UPF0227) AM435_RS12950 PF00182 Chitinase class I AM435_RS12955 PF04717 Type VI secretion system, phage-baseplate injector AM435_RS12955 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) AM435_RS12955 PF13296 Putative type VI secretion system Rhs element Vgr AM435_RS12960 PF02600 Disulfide bond formation protein DsbB AM435_RS12965 PF04262 Glutamate-cysteine ligase AM435_RS12980 PF04286 Protein of unknown function (DUF445) AM435_RS12985 PF00155 Aminotransferase class I and II AM435_RS12990 PF01554 MatE AM435_RS12995 PF00106 short chain dehydrogenase AM435_RS13005 PF00486 Transcriptional regulatory protein, C terminal AM435_RS13005 PF00072 Response regulator receiver domain AM435_RS13010 PF11808 Phosphate regulon sensor protein PhoR AM435_RS13010 PF00989 PAS fold AM435_RS13010 PF00512 His Kinase A (phospho-acceptor) domain AM435_RS13010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM435_RS13025 PF03069 Acetamidase/Formamidase family AM435_RS13030 PF02666 Phosphatidylserine decarboxylase AM435_RS13035 PF00581 Rhodanese-like domain AM435_RS13040 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AM435_RS13040 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AM435_RS13050 PF00199 Catalase AM435_RS13050 PF06628 Catalase-related immune-responsive AM435_RS13055 PF02580 D-Tyr-tRNA(Tyr) deacylase AM435_RS13085 PF00925 GTP cyclohydrolase II AM435_RS13085 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AM435_RS13090 PF00885 6,7-dimethyl-8-ribityllumazine synthase AM435_RS13095 PF01029 NusB family AM435_RS13100 PF02769 AIR synthase related protein, C-terminal domain AM435_RS13100 PF00586 AIR synthase related protein, N-terminal domain AM435_RS13105 PF04608 Phosphatidylglycerophosphatase A AM435_RS13110 PF12804 MobA-like NTP transferase domain AM435_RS13110 PF14602 Hexapeptide repeat of succinyl-transferase AM435_RS13110 PF00132 Bacterial transferase hexapeptide (six repeats) AM435_RS13115 PF01380 SIS domain AM435_RS13120 PF01177 Asp/Glu/Hydantoin racemase AM435_RS13125 PF13419 Haloacid dehalogenase-like hydrolase AM435_RS13135 PF00491 Arginase family AM435_RS13140 PF01979 Amidohydrolase family AM435_RS13145 PF00324 Amino acid permease AM435_RS13150 PF00221 Aromatic amino acid lyase AM435_RS13155 PF01175 Urocanase Rossmann-like domain AM435_RS13155 PF17392 Urocanase C-terminal domain AM435_RS13155 PF17391 Urocanase N-terminal domain AM435_RS13160 PF05962 HutD AM435_RS13165 PF07702 UTRA domain AM435_RS13165 PF00392 Bacterial regulatory proteins, gntR family AM435_RS13175 PF07683 Cobalamin synthesis protein cobW C-terminal domain AM435_RS13175 PF02492 CobW/HypB/UreG, nucleotide-binding domain AM435_RS13185 PF00324 Amino acid permease AM435_RS13195 PF14497 Glutathione S-transferase, C-terminal domain AM435_RS13195 PF02798 Glutathione S-transferase, N-terminal domain AM435_RS13200 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM435_RS13210 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM435_RS13215 PF04463 Protein of unknown function (DUF523) AM435_RS13220 PF01554 MatE AM435_RS13225 PF01758 Sodium Bile acid symporter family AM435_RS13230 PF00857 Isochorismatase family AM435_RS13235 PF00701 Dihydrodipicolinate synthetase family AM435_RS13245 PF01259 SAICAR synthetase AM435_RS13260 PF01226 Formate/nitrite transporter AM435_RS13265 PF16193 AAA C-terminal domain AM435_RS13265 PF00004 ATPase family associated with various cellular activities (AAA) AM435_RS13265 PF12002 MgsA AAA+ ATPase C terminal AM435_RS13270 PF07995 Glucose / Sorbosone dehydrogenase AM435_RS13275 PF03692 Putative zinc- or iron-chelating domain AM435_RS13280 PF07043 Protein of unknown function (DUF1328) AM435_RS13295 PF00730 HhH-GPD superfamily base excision DNA repair protein AM435_RS13295 PF14815 NUDIX domain AM435_RS13295 PF00633 Helix-hairpin-helix motif AM435_RS13295 PF10576 Iron-sulfur binding domain of endonuclease III AM435_RS13310 PF03352 Methyladenine glycosylase AM435_RS13315 PF08240 Alcohol dehydrogenase GroES-like domain AM435_RS13315 PF00107 Zinc-binding dehydrogenase AM435_RS13320 PF00155 Aminotransferase class I and II AM435_RS13320 PF00392 Bacterial regulatory proteins, gntR family AM435_RS13335 PF03466 LysR substrate binding domain AM435_RS13335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM435_RS13340 PF00248 Aldo/keto reductase family AM435_RS13345 PF07690 Major Facilitator Superfamily AM435_RS13355 PF01113 Dihydrodipicolinate reductase, N-terminus AM435_RS13355 PF05173 Dihydrodipicolinate reductase, C-terminus AM435_RS13365 PF00226 DnaJ domain AM435_RS13365 PF00684 DnaJ central domain AM435_RS13365 PF01556 DnaJ C terminal domain AM435_RS13375 PF00873 AcrB/AcrD/AcrF family AM435_RS13380 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM435_RS13385 PF08361 MAATS-type transcriptional repressor, C-terminal region AM435_RS13385 PF00440 Bacterial regulatory proteins, tetR family AM435_RS13390 PF00311 Phosphoenolpyruvate carboxylase AM435_RS13395 PF00860 Permease family AM435_RS13400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM435_RS13400 PF03466 LysR substrate binding domain AM435_RS13415 PF00920 Dehydratase family AM435_RS13420 PF02911 Formyl transferase, C-terminal domain AM435_RS13420 PF00551 Formyl transferase AM435_RS13425 PF01029 NusB family AM435_RS13425 PF01189 16S rRNA methyltransferase RsmB/F AM435_RS13435 PF00209 Sodium:neurotransmitter symporter family AM435_RS13480 PF00579 tRNA synthetases class I (W and Y) AM435_RS13485 PF03702 Anhydro-N-acetylmuramic acid kinase AM435_RS13490 PF00561 alpha/beta hydrolase fold AM435_RS13495 PF01521 Iron-sulphur cluster biosynthesis AM435_RS13515 PF12848 ABC transporter AM435_RS13515 PF00005 ABC transporter AM435_RS13520 PF09335 SNARE associated Golgi protein AM435_RS13530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM435_RS13530 PF01751 Toprim domain AM435_RS13530 PF18053 DNA gyrase B subunit insert domain AM435_RS13530 PF00204 DNA gyrase B AM435_RS13530 PF00986 DNA gyrase B subunit, carboxyl terminus AM435_RS13535 PF02463 RecF/RecN/SMC N terminal domain AM435_RS13540 PF02767 DNA polymerase III beta subunit, central domain AM435_RS13540 PF02768 DNA polymerase III beta subunit, C-terminal domain AM435_RS13540 PF00712 DNA polymerase III beta subunit, N-terminal domain AM435_RS13545 PF08299 Bacterial dnaA protein helix-turn-helix AM435_RS13545 PF00308 Bacterial dnaA protein AM435_RS13545 PF11638 DnaA N-terminal domain AM435_RS13550 PF00468 Ribosomal protein L34 AM435_RS13555 PF00825 Ribonuclease P AM435_RS13560 PF01809 Putative membrane protein insertion efficiency factor AM435_RS13565 PF14849 YidC periplasmic domain AM435_RS13565 PF02096 60Kd inner membrane protein AM435_RS13570 PF12631 MnmE helical domain AM435_RS13570 PF01926 50S ribosome-binding GTPase AM435_RS13570 PF10396 GTP-binding protein TrmE N-terminus AM435_RS13575 PF02583 Metal-sensitive transcriptional repressor AM435_RS13580 PF01545 Cation efflux family AM435_RS13580 PF16916 Dimerisation domain of Zinc Transporter AM435_RS13585 PF13098 Thioredoxin-like domain AM435_RS13585 PF10411 Disulfide bond isomerase protein N-terminus AM435_RS13595 PF00156 Phosphoribosyl transferase domain AM435_RS13600 PF01979 Amidohydrolase family AM435_RS13605 PF00355 Rieske [2Fe-2S] domain AM435_RS13610 PF03738 Glutathionylspermidine synthase preATP-grasp AM435_RS13625 PF03741 Integral membrane protein TerC family AM435_RS13630 PF01569 PAP2 superfamily AM435_RS13640 PF08245 Mur ligase middle domain AM435_RS13640 PF01225 Mur ligase family, catalytic domain AM435_RS13640 PF02875 Mur ligase family, glutamate ligase domain AM435_RS13655 PF00731 AIR carboxylase AM435_RS13660 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AM435_RS13660 PF02222 ATP-grasp domain AM435_RS13665 PF13406 Transglycosylase SLT domain AM435_RS13685 PF00012 Hsp70 protein AM435_RS13690 PF01025 GrpE AM435_RS13715 PF07859 alpha/beta hydrolase fold AM435_RS13720 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AM435_RS13760 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM435_RS13765 PF01252 Signal peptidase (SPase) II AM435_RS13770 PF06827 Zinc finger found in FPG and IleRS AM435_RS13770 PF00133 tRNA synthetases class I (I, L, M and V) AM435_RS13770 PF08264 Anticodon-binding domain of tRNA AM435_RS13775 PF01687 Riboflavin kinase AM435_RS13775 PF06574 FAD synthetase AM435_RS13785 PF01048 Phosphorylase superfamily AM435_RS13790 PF08362 YcdC-like protein, C-terminal region AM435_RS13790 PF00440 Bacterial regulatory proteins, tetR family AM435_RS13795 PF00005 ABC transporter AM435_RS13800 PF00528 Binding-protein-dependent transport system inner membrane component AM435_RS13805 PF00296 Luciferase-like monooxygenase AM435_RS13810 PF09084 NMT1/THI5 like AM435_RS13815 PF09084 NMT1/THI5 like AM435_RS13820 PF00696 Amino acid kinase family AM435_RS13820 PF00583 Acetyltransferase (GNAT) family AM435_RS13835 PF00106 short chain dehydrogenase AM435_RS13840 PF13419 Haloacid dehalogenase-like hydrolase AM435_RS13850 PF01323 DSBA-like thioredoxin domain AM435_RS13855 PF08360 QacR-like protein, C-terminal region AM435_RS13855 PF00440 Bacterial regulatory proteins, tetR family AM435_RS13860 PF00440 Bacterial regulatory proteins, tetR family AM435_RS13865 PF00175 Oxidoreductase NAD-binding domain AM435_RS13865 PF00111 2Fe-2S iron-sulfur cluster binding domain AM435_RS13865 PF00970 Oxidoreductase FAD-binding domain AM435_RS13870 PF00487 Fatty acid desaturase AM435_RS13875 PF01138 3' exoribonuclease family, domain 1 AM435_RS13875 PF03725 3' exoribonuclease family, domain 2 AM435_RS13885 PF04185 Phosphoesterase family AM435_RS13885 PF05506 Domain of unknown function (DUF756) AM435_RS13895 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AM435_RS13895 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AM435_RS13900 PF01510 N-acetylmuramoyl-L-alanine amidase AM435_RS13905 PF03023 Lipid II flippase MurJ AM435_RS13910 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM435_RS13910 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AM435_RS13915 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AM435_RS13915 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM435_RS13920 PF13614 AAA domain AM435_RS13920 PF02706 Chain length determinant protein AM435_RS13920 PF13807 G-rich domain on putative tyrosine kinase AM435_RS13925 PF01451 Low molecular weight phosphotyrosine protein phosphatase AM435_RS13930 PF18412 Outer-membrane lipoprotein Wza C-terminal domain AM435_RS13930 PF10531 SLBB domain AM435_RS13930 PF02563 Polysaccharide biosynthesis/export protein AM435_RS13935 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AM435_RS13935 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AM435_RS13935 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AM435_RS13940 PF01370 NAD dependent epimerase/dehydratase family AM435_RS13965 PF02719 Polysaccharide biosynthesis protein AM435_RS13965 PF08485 Polysaccharide biosynthesis protein C-terminal AM435_RS13970 PF01370 NAD dependent epimerase/dehydratase family AM435_RS13975 PF02350 UDP-N-acetylglucosamine 2-epimerase AM435_RS13980 PF13579 Glycosyl transferase 4-like domain AM435_RS13985 PF01370 NAD dependent epimerase/dehydratase family AM435_RS13990 PF00953 Glycosyl transferase family 4 AM435_RS13995 PF02397 Bacterial sugar transferase AM435_RS14000 PF00483 Nucleotidyl transferase AM435_RS14005 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AM435_RS14005 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AM435_RS14005 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AM435_RS14010 PF00342 Phosphoglucose isomerase AM435_RS14015 PF16363 GDP-mannose 4,6 dehydratase AM435_RS14020 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM435_RS14020 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM435_RS14020 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM435_RS14020 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM435_RS14025 PF02652 L-lactate permease AM435_RS14030 PF07729 FCD domain AM435_RS14030 PF00392 Bacterial regulatory proteins, gntR family AM435_RS14035 PF01070 FMN-dependent dehydrogenase AM435_RS14040 PF01565 FAD binding domain AM435_RS14040 PF09330 D-lactate dehydrogenase, membrane binding AM435_RS14045 PF00155 Aminotransferase class I and II AM435_RS14055 PF00392 Bacterial regulatory proteins, gntR family AM435_RS14055 PF07729 FCD domain AM435_RS14065 PF00285 Citrate synthase, C-terminal domain AM435_RS14070 PF00330 Aconitase family (aconitate hydratase) AM435_RS14070 PF00694 Aconitase C-terminal domain AM435_RS14090 PF00293 NUDIX domain AM435_RS14105 PF00109 Beta-ketoacyl synthase, N-terminal domain AM435_RS14105 PF02801 Beta-ketoacyl synthase, C-terminal domain AM435_RS14120 PF00849 RNA pseudouridylate synthase AM435_RS14135 PF00593 TonB dependent receptor AM435_RS14135 PF07715 TonB-dependent Receptor Plug Domain AM435_RS14145 PF01037 Lrp/AsnC ligand binding domain AM435_RS14150 PF01266 FAD dependent oxidoreductase AM435_RS14155 PF00842 Alanine racemase, C-terminal domain AM435_RS14155 PF01168 Alanine racemase, N-terminal domain AM435_RS14160 PF01042 Endoribonuclease L-PSP AM435_RS14165 PF00324 Amino acid permease AM435_RS14170 PF00324 Amino acid permease AM435_RS14180 PF00171 Aldehyde dehydrogenase family AM435_RS14185 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM435_RS14185 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AM435_RS14190 PF13193 AMP-binding enzyme C-terminal domain AM435_RS14190 PF00501 AMP-binding enzyme AM435_RS14195 PF02770 Acyl-CoA dehydrogenase, middle domain AM435_RS14195 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM435_RS14195 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM435_RS14200 PF00378 Enoyl-CoA hydratase/isomerase AM435_RS14205 PF00378 Enoyl-CoA hydratase/isomerase AM435_RS14210 PF07690 Major Facilitator Superfamily AM435_RS14210 PF00083 Sugar (and other) transporter AM435_RS14215 PF00765 Autoinducer synthase AM435_RS14225 PF03472 Autoinducer binding domain AM435_RS14225 PF00196 Bacterial regulatory proteins, luxR family AM435_RS14230 PF13737 Transposase DDE domain AM435_RS14235 PF00501 AMP-binding enzyme AM435_RS14240 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM435_RS14240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM435_RS14240 PF02770 Acyl-CoA dehydrogenase, middle domain AM435_RS14245 PF08242 Methyltransferase domain AM435_RS14245 PF02801 Beta-ketoacyl synthase, C-terminal domain AM435_RS14245 PF16197 Ketoacyl-synthetase C-terminal extension AM435_RS14245 PF00550 Phosphopantetheine attachment site AM435_RS14245 PF14765 Polyketide synthase dehydratase AM435_RS14245 PF00109 Beta-ketoacyl synthase, N-terminal domain AM435_RS14245 PF00975 Thioesterase domain AM435_RS14250 PF00550 Phosphopantetheine attachment site AM435_RS14250 PF00501 AMP-binding enzyme AM435_RS14250 PF00668 Condensation domain AM435_RS14250 PF13193 AMP-binding enzyme C-terminal domain AM435_RS14250 PF00975 Thioesterase domain AM435_RS14265 PF12697 Alpha/beta hydrolase family AM435_RS14270 PF01648 4'-phosphopantetheinyl transferase superfamily AM435_RS14285 PF01722 BolA-like protein AM435_RS14295 PF13614 AAA domain AM435_RS14310 PF09335 SNARE associated Golgi protein AM435_RS14315 PF07681 DoxX AM435_RS14320 PF04286 Protein of unknown function (DUF445) AM435_RS14325 PF00958 GMP synthase C terminal domain AM435_RS14325 PF02540 NAD synthase AM435_RS14325 PF00117 Glutamine amidotransferase class-I AM435_RS14330 PF13427 Domain of unknown function (DUF4111) AM435_RS14330 PF01909 Nucleotidyltransferase domain AM435_RS14335 PF03551 Transcriptional regulator PadR-like family AM435_RS14345 PF02678 Pirin AM435_RS14345 PF05726 Pirin C-terminal cupin domain AM435_RS14365 PF00750 tRNA synthetases class I (R) AM435_RS14365 PF05746 DALR anticodon binding domain AM435_RS14365 PF03485 Arginyl tRNA synthetase N terminal domain AM435_RS14370 PF03949 Malic enzyme, NAD binding domain AM435_RS14370 PF00390 Malic enzyme, N-terminal domain AM435_RS14380 PF04261 Dyp-type peroxidase family AM435_RS14385 PF01810 LysE type translocator AM435_RS14390 PF00950 ABC 3 transport family AM435_RS14395 PF00005 ABC transporter AM435_RS14415 PF00119 ATP synthase A chain AM435_RS14420 PF00137 ATP synthase subunit C AM435_RS14425 PF00430 ATP synthase B/B' CF(0) AM435_RS14430 PF00213 ATP synthase delta (OSCP) subunit AM435_RS14435 PF00306 ATP synthase alpha/beta chain, C terminal domain AM435_RS14435 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM435_RS14435 PF02874 ATP synthase alpha/beta family, beta-barrel domain AM435_RS14440 PF00231 ATP synthase AM435_RS14445 PF02874 ATP synthase alpha/beta family, beta-barrel domain AM435_RS14445 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM435_RS14450 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AM435_RS14460 PF00255 Glutathione peroxidase AM435_RS14470 PF07690 Major Facilitator Superfamily AM435_RS14475 PF00440 Bacterial regulatory proteins, tetR family AM435_RS14480 PF00892 EamA-like transporter family AM435_RS14485 PF01300 Telomere recombination AM435_RS14490 PF02481 DNA recombination-mediator protein A AM435_RS14490 PF17782 DprA winged helix domain AM435_RS14500 PF01327 Polypeptide deformylase AM435_RS14525 PF00440 Bacterial regulatory proteins, tetR family AM435_RS14560 PF00291 Pyridoxal-phosphate dependent enzyme AM435_RS14570 PF03358 NADPH-dependent FMN reductase AM435_RS14590 PF04055 Radical SAM superfamily AM435_RS14590 PF08497 Radical SAM N-terminal AM435_RS14590 PF11842 Domain of unknown function (DUF3362) AM435_RS14605 PF11798 IMS family HHH motif AM435_RS14605 PF11799 impB/mucB/samB family C-terminal domain AM435_RS14605 PF00817 impB/mucB/samB family AM435_RS14615 PF07690 Major Facilitator Superfamily AM435_RS14620 PF03641 Possible lysine decarboxylase AM435_RS14625 PF03471 Transporter associated domain AM435_RS14625 PF03741 Integral membrane protein TerC family AM435_RS14630 PF02810 SEC-C motif AM435_RS14635 PF03458 UPF0126 domain AM435_RS14640 PF07690 Major Facilitator Superfamily AM435_RS14645 PF00521 DNA gyrase/topoisomerase IV, subunit A AM435_RS14645 PF03989 DNA gyrase C-terminal domain, beta-propeller AM435_RS14650 PF13193 AMP-binding enzyme C-terminal domain AM435_RS14650 PF00501 AMP-binding enzyme AM435_RS14665 PF00719 Inorganic pyrophosphatase AM435_RS14670 PF03573 outer membrane porin, OprD family AM435_RS14680 PF00701 Dihydrodipicolinate synthetase family AM435_RS14690 PF00155 Aminotransferase class I and II AM435_RS14690 PF00392 Bacterial regulatory proteins, gntR family AM435_RS14695 PF01078 Magnesium chelatase, subunit ChlI AM435_RS14695 PF13335 Magnesium chelatase, subunit ChlI C-terminal AM435_RS14705 PF00665 Integrase core domain AM435_RS14725 PF00582 Universal stress protein family AM435_RS14730 PF01740 STAS domain AM435_RS14730 PF00916 Sulfate permease family AM435_RS14755 PF07690 Major Facilitator Superfamily AM435_RS14760 PF00440 Bacterial regulatory proteins, tetR family AM435_RS14760 PF02909 Tetracyclin repressor-like, C-terminal domain AM435_RS14785 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase AM435_RS14790 PF01636 Phosphotransferase enzyme family AM435_RS14800 PF01078 Magnesium chelatase, subunit ChlI AM435_RS14800 PF13335 Magnesium chelatase, subunit ChlI C-terminal AM435_RS14810 PF00543 Nitrogen regulatory protein P-II AM435_RS14815 PF00909 Ammonium Transporter Family AM435_RS14820 PF03477 ATP cone domain AM435_RS14825 PF01872 RibD C-terminal domain AM435_RS14825 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AM435_RS14835 PF00677 Lumazine binding domain AM435_RS14855 PF00883 Cytosol aminopeptidase family, catalytic domain AM435_RS14855 PF02789 Cytosol aminopeptidase family, N-terminal domain AM435_RS14865 PF03739 Lipopolysaccharide export system permease LptF/LptG AM435_RS14870 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AM435_RS14870 PF01676 Metalloenzyme superfamily AM435_RS14875 PF03572 Peptidase family S41 AM435_RS14875 PF00595 PDZ domain AM435_RS14880 PF00158 Sigma-54 interaction domain AM435_RS14880 PF00072 Response regulator receiver domain AM435_RS14880 PF02954 Bacterial regulatory protein, Fis family AM435_RS14885 PF00512 His Kinase A (phospho-acceptor) domain AM435_RS14885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM435_RS14890 PF00196 Bacterial regulatory proteins, luxR family AM435_RS14890 PF00072 Response regulator receiver domain AM435_RS14895 PF00768 D-alanyl-D-alanine carboxypeptidase AM435_RS14900 PF00291 Pyridoxal-phosphate dependent enzyme AM435_RS14905 PF01842 ACT domain AM435_RS14905 PF00742 Homoserine dehydrogenase AM435_RS14905 PF03447 Homoserine dehydrogenase, NAD binding domain AM435_RS14910 PF13098 Thioredoxin-like domain AM435_RS14910 PF10411 Disulfide bond isomerase protein N-terminus AM435_RS14915 PF02899 Phage integrase, N-terminal SAM-like domain AM435_RS14915 PF00589 Phage integrase family AM435_RS14925 PF07670 Nucleoside recognition AM435_RS14925 PF07664 Ferrous iron transport protein B C terminus AM435_RS14925 PF02421 Ferrous iron transport protein B AM435_RS14935 PF08245 Mur ligase middle domain AM435_RS14935 PF02875 Mur ligase family, glutamate ligase domain AM435_RS14940 PF01098 Cell cycle protein AM435_RS14945 PF00749 tRNA synthetases class I (E and Q), catalytic domain AM435_RS14950 PF01258 Prokaryotic dksA/traR C4-type zinc finger AM435_RS14955 PF00149 Calcineurin-like phosphoesterase AM435_RS14960 PF00293 NUDIX domain AM435_RS14965 PF01964 Radical SAM ThiC family AM435_RS14965 PF13667 ThiC-associated domain AM435_RS14980 PF00892 EamA-like transporter family AM435_RS14985 PF02321 Outer membrane efflux protein AM435_RS14990 PF01895 PhoU domain AM435_RS14995 PF04362 Bacterial Fe(2+) trafficking AM435_RS15000 PF14698 Argininosuccinate lyase C-terminal AM435_RS15000 PF00206 Lyase AM435_RS15005 PF06580 Histidine kinase AM435_RS15005 PF07694 5TMR of 5TMR-LYT AM435_RS15005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM435_RS15010 PF04397 LytTr DNA-binding domain AM435_RS15010 PF00072 Response regulator receiver domain AM435_RS15015 PF03900 Porphobilinogen deaminase, C-terminal domain AM435_RS15015 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AM435_RS15040 PF00816 H-NS histone family AM435_RS15055 PF00263 Bacterial type II and III secretion system protein AM435_RS15055 PF03958 Bacterial type II/III secretion system short domain AM435_RS15060 PF12401 Protein of unknown function (DUF2662) AM435_RS15060 PF00498 FHA domain AM435_RS15065 PF13419 Haloacid dehalogenase-like hydrolase AM435_RS15070 PF04715 Anthranilate synthase component I, N terminal region AM435_RS15070 PF00425 chorismate binding enzyme AM435_RS15095 PF00009 Elongation factor Tu GTP binding domain AM435_RS15095 PF03144 Elongation factor Tu domain 2 AM435_RS15095 PF03143 Elongation factor Tu C-terminal domain AM435_RS15105 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AM435_RS15110 PF02357 Transcription termination factor nusG AM435_RS15110 PF00467 KOW motif AM435_RS15115 PF03946 Ribosomal protein L11, N-terminal domain AM435_RS15115 PF00298 Ribosomal protein L11, RNA binding domain AM435_RS15120 PF00687 Ribosomal protein L1p/L10e family AM435_RS15125 PF00466 Ribosomal protein L10 AM435_RS15130 PF00542 Ribosomal protein L7/L12 C-terminal domain AM435_RS15130 PF16320 Ribosomal protein L7/L12 dimerisation domain AM435_RS15135 PF10385 RNA polymerase beta subunit external 1 domain AM435_RS15135 PF04560 RNA polymerase Rpb2, domain 7 AM435_RS15135 PF04563 RNA polymerase beta subunit AM435_RS15135 PF04561 RNA polymerase Rpb2, domain 2 AM435_RS15135 PF04565 RNA polymerase Rpb2, domain 3 AM435_RS15135 PF00562 RNA polymerase Rpb2, domain 6 AM435_RS15140 PF00623 RNA polymerase Rpb1, domain 2 AM435_RS15140 PF05000 RNA polymerase Rpb1, domain 4 AM435_RS15140 PF04998 RNA polymerase Rpb1, domain 5 AM435_RS15140 PF04997 RNA polymerase Rpb1, domain 1 AM435_RS15140 PF04983 RNA polymerase Rpb1, domain 3 AM435_RS15160 PF00561 alpha/beta hydrolase fold AM435_RS15165 PF03553 Na+/H+ antiporter family AM435_RS15165 PF13726 Na+-H+ antiporter family AM435_RS15180 PF00183 Hsp90 protein AM435_RS15180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM435_RS15195 PF01323 DSBA-like thioredoxin domain AM435_RS15205 PF09278 MerR, DNA binding AM435_RS15205 PF00376 MerR family regulatory protein AM435_RS15225 PF02803 Thiolase, C-terminal domain AM435_RS15225 PF00108 Thiolase, N-terminal domain AM435_RS15230 PF00378 Enoyl-CoA hydratase/isomerase AM435_RS15230 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM435_RS15230 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM435_RS15250 PF00809 Pterin binding enzyme AM435_RS15255 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM435_RS15255 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM435_RS15255 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM435_RS15255 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM435_RS15270 PF00665 Integrase core domain AM435_RS15295 PF01541 GIY-YIG catalytic domain AM435_RS15295 PF02151 UvrB/uvrC motif AM435_RS15295 PF08459 UvrC Helix-hairpin-helix N-terminal AM435_RS15305 PF01066 CDP-alcohol phosphatidyltransferase AM435_RS15310 PF12833 Helix-turn-helix domain AM435_RS15310 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AM435_RS15310 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AM435_RS15310 PF02805 Metal binding domain of Ada AM435_RS15335 PF13533 Biotin-lipoyl like AM435_RS15340 PF03652 Holliday junction resolvase AM435_RS15345 PF02622 Uncharacterized ACR, COG1678 AM435_RS15350 PF02463 RecF/RecN/SMC N terminal domain AM435_RS15360 PF06865 Pyrimidine/purine nucleoside phosphorylase AM435_RS15365 PF00588 SpoU rRNA Methylase family AM435_RS15365 PF08032 RNA 2'-O ribose methyltransferase substrate binding AM435_RS15375 PF01121 Dephospho-CoA kinase AM435_RS15380 PF01478 Type IV leader peptidase family AM435_RS15380 PF06750 Bacterial Peptidase A24 N-terminal domain AM435_RS15385 PF00482 Type II secretion system (T2SS), protein F AM435_RS15390 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AM435_RS15390 PF00437 Type II/IV secretion system protein AM435_RS15395 PF00121 Triosephosphate isomerase AM435_RS15400 PF03840 Preprotein translocase SecG subunit AM435_RS15420 PF02576 RimP N-terminal domain AM435_RS15420 PF17384 RimP C-terminal SH3 domain AM435_RS15425 PF00575 S1 RNA binding domain AM435_RS15425 PF08529 NusA N-terminal domain AM435_RS15425 PF13184 NusA-like KH domain AM435_RS15430 PF11987 Translation-initiation factor 2 AM435_RS15430 PF00009 Elongation factor Tu GTP binding domain AM435_RS15430 PF08364 Bacterial translation initiation factor IF-2 associated region AM435_RS15430 PF04760 Translation initiation factor IF-2, N-terminal region AM435_RS15435 PF02033 Ribosome-binding factor A AM435_RS15440 PF03334 Na+/H+ antiporter subunit AM435_RS15445 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) AM435_RS15450 PF01899 Na+/H+ ion antiporter subunit AM435_RS15455 PF00361 Proton-conducting membrane transporter AM435_RS15460 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AM435_RS15465 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AM435_RS15465 PF00361 Proton-conducting membrane transporter AM435_RS15465 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AM435_RS15465 PF13244 Domain of unknown function (DUF4040) AM435_RS15480 PF01502 Phosphoribosyl-AMP cyclohydrolase AM435_RS15485 PF01494 FAD binding domain AM435_RS15490 PF03109 ABC1 family AM435_RS15500 PF01209 ubiE/COQ5 methyltransferase family AM435_RS15510 PF03976 Polyphosphate kinase 2 (PPK2) AM435_RS15520 PF17946 RecC C-terminal domain AM435_RS15525 PF00580 UvrD/REP helicase N-terminal domain AM435_RS15525 PF13361 UvrD-like helicase C-terminal domain AM435_RS15525 PF12705 PD-(D/E)XK nuclease superfamily AM435_RS15530 PF13538 UvrD-like helicase C-terminal domain AM435_RS15535 PF00144 Beta-lactamase AM435_RS15540 PF00312 Ribosomal protein S15 AM435_RS15545 PF00575 S1 RNA binding domain AM435_RS15545 PF03725 3' exoribonuclease family, domain 2 AM435_RS15545 PF01138 3' exoribonuclease family, domain 1 AM435_RS15545 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AM435_RS15545 PF00013 KH domain AM435_RS15550 PF01544 CorA-like Mg2+ transporter protein AM435_RS15560 PF01556 DnaJ C terminal domain AM435_RS15560 PF00226 DnaJ domain AM435_RS15570 PF01430 Hsp33 protein AM435_RS15575 PF00999 Sodium/hydrogen exchanger family AM435_RS15575 PF02254 TrkA-N domain AM435_RS15580 PF00270 DEAD/DEAH box helicase AM435_RS15580 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AM435_RS15580 PF18074 Primosomal protein N C-terminal domain AM435_RS15580 PF17764 3′ DNA-binding domain (3′BD) AM435_RS15580 PF00271 Helicase conserved C-terminal domain AM435_RS15585 PF00482 Type II secretion system (T2SS), protein F AM435_RS15590 PF08334 Type II secretion system (T2SS), protein G AM435_RS15590 PF07963 Prokaryotic N-terminal methylation motif AM435_RS15600 PF01588 Putative tRNA binding domain AM435_RS15605 PF00795 Carbon-nitrogen hydrolase AM435_RS15610 PF03471 Transporter associated domain AM435_RS15610 PF00571 CBS domain AM435_RS15615 PF01206 Sulfurtransferase TusA AM435_RS15630 PF01177 Asp/Glu/Hydantoin racemase AM435_RS15640 PF00762 Ferrochelatase AM435_RS15645 PF00753 Metallo-beta-lactamase superfamily AM435_RS15650 PF03884 DNA gyrase inhibitor YacG AM435_RS15670 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AM435_RS15685 PF01197 Ribosomal protein L31 AM435_RS15690 PF03109 ABC1 family AM435_RS15695 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AM435_RS15695 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM435_RS15700 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM435_RS15700 PF02770 Acyl-CoA dehydrogenase, middle domain AM435_RS15700 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AM435_RS15705 PF01554 MatE AM435_RS15715 PF06969 HemN C-terminal domain AM435_RS15715 PF04055 Radical SAM superfamily AM435_RS15720 PF00106 short chain dehydrogenase AM435_RS15725 PF03466 LysR substrate binding domain AM435_RS15725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM435_RS15740 PF13193 AMP-binding enzyme C-terminal domain AM435_RS15740 PF00501 AMP-binding enzyme AM435_RS15745 PF00575 S1 RNA binding domain AM435_RS15745 PF10150 Ribonuclease E/G family AM435_RS15745 PF12111 Polyribonucleotide phosphorylase C terminal AM435_RS15755 PF01479 S4 domain AM435_RS15755 PF00849 RNA pseudouridylate synthase AM435_RS15760 PF13419 Haloacid dehalogenase-like hydrolase AM435_RS15765 PF13280 WYL domain AM435_RS15765 PF08279 HTH domain AM435_RS15770 PF02798 Glutathione S-transferase, N-terminal domain AM435_RS15780 PF03466 LysR substrate binding domain AM435_RS15780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM435_RS15785 PF12706 Beta-lactamase superfamily domain AM435_RS15790 PF00141 Peroxidase AM435_RS15795 PF05524 PEP-utilising enzyme, N-terminal AM435_RS15795 PF01590 GAF domain AM435_RS15795 PF02896 PEP-utilising enzyme, TIM barrel domain AM435_RS15795 PF00391 PEP-utilising enzyme, mobile domain AM435_RS15800 PF00293 NUDIX domain AM435_RS15820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM435_RS15820 PF03466 LysR substrate binding domain AM435_RS15830 PF00330 Aconitase family (aconitate hydratase) AM435_RS15835 PF00694 Aconitase C-terminal domain AM435_RS15845 PF00180 Isocitrate/isopropylmalate dehydrogenase AM435_RS15865 PF01176 Translation initiation factor 1A / IF-1 AM435_RS15875 PF01416 tRNA pseudouridine synthase AM435_RS15895 PF01118 Semialdehyde dehydrogenase, NAD binding domain AM435_RS15895 PF02774 Semialdehyde dehydrogenase, dimerisation domain AM435_RS15905 PF00375 Sodium:dicarboxylate symporter family AM435_RS15915 PF03279 Bacterial lipid A biosynthesis acyltransferase AM435_RS15920 PF01810 LysE type translocator AM435_RS15925 PF00005 ABC transporter AM435_RS15925 PF12848 ABC transporter AM435_RS15925 PF16326 ABC transporter C-terminal domain AM435_RS15930 PF04102 SlyX AM435_RS15935 PF00107 Zinc-binding dehydrogenase AM435_RS15935 PF08240 Alcohol dehydrogenase GroES-like domain AM435_RS15940 PF01638 HxlR-like helix-turn-helix AM435_RS15950 PF08272 Topoisomerase I zinc-ribbon-like AM435_RS15950 PF01131 DNA topoisomerase AM435_RS15950 PF01751 Toprim domain AM435_RS15950 PF01396 Topoisomerase DNA binding C4 zinc finger AM435_RS15965 PF00580 UvrD/REP helicase N-terminal domain AM435_RS15965 PF13361 UvrD-like helicase C-terminal domain AM435_RS15970 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) AM435_RS15990 PF02254 TrkA-N domain AM435_RS15990 PF00999 Sodium/hydrogen exchanger family AM435_RS15995 PF00471 Ribosomal protein L33 AM435_RS16000 PF00830 Ribosomal L28 family AM435_RS16005 PF00171 Aldehyde dehydrogenase family AM435_RS16015 PF01842 ACT domain AM435_RS16015 PF00551 Formyl transferase AM435_RS16025 PF01618 MotA/TolQ/ExbB proton channel family AM435_RS16035 PF01625 Peptide methionine sulfoxide reductase AM435_RS16045 PF00186 Dihydrofolate reductase AM435_RS16050 PF00303 Thymidylate synthase AM435_RS16065 PF01790 Prolipoprotein diacylglyceryl transferase AM435_RS16085 PF00902 Sec-independent protein translocase protein (TatC) AM435_RS16090 PF02416 mttA/Hcf106 family AM435_RS16095 PF02416 mttA/Hcf106 family AM435_RS16105 PF01725 Ham1 family AM435_RS16115 PF07021 Methionine biosynthesis protein MetW AM435_RS16115 PF00561 alpha/beta hydrolase fold AM435_RS16120 PF00561 alpha/beta hydrolase fold AM435_RS16125 PF08502 LeuA allosteric (dimerisation) domain AM435_RS16125 PF00682 HMGL-like AM435_RS16130 PF13640 2OG-Fe(II) oxygenase superfamily AM435_RS16130 PF18331 PKHD-type hydroxylase C-terminal domain AM435_RS16135 PF07715 TonB-dependent Receptor Plug Domain AM435_RS16135 PF00593 TonB dependent receptor AM435_RS16140 PF05698 Bacterial trigger factor protein (TF) C-terminus AM435_RS16140 PF05697 Bacterial trigger factor protein (TF) AM435_RS16140 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM435_RS16145 PF00574 Clp protease AM435_RS16150 PF06689 ClpX C4-type zinc finger AM435_RS16150 PF07724 AAA domain (Cdc48 subfamily) AM435_RS16150 PF10431 C-terminal, D2-small domain, of ClpB protein AM435_RS16165 PF05683 Fumarase C-terminus AM435_RS16165 PF05681 Fumarate hydratase (Fumerase) AM435_RS16170 PF01515 Phosphate acetyl/butaryl transferase AM435_RS16170 PF07085 DRTGG domain AM435_RS16175 PF00871 Acetokinase family AM435_RS16180 PF00920 Dehydratase family AM435_RS16185 PF01081 KDPG and KHG aldolase AM435_RS16190 PF02447 GntP family permease AM435_RS16195 PF01202 Shikimate kinase AM435_RS16200 PF00171 Aldehyde dehydrogenase family AM435_RS16205 PF00171 Aldehyde dehydrogenase family AM435_RS16210 PF00561 alpha/beta hydrolase fold AM435_RS16220 PF00933 Glycosyl hydrolase family 3 N terminal domain AM435_RS16225 PF17804 Tail specific protease N-terminal domain AM435_RS16225 PF11818 C-terminal domain of tail specific protease (DUF3340) AM435_RS16225 PF00595 PDZ domain AM435_RS16225 PF03572 Peptidase family S41 AM435_RS16230 PF00534 Glycosyl transferases group 1 AM435_RS16230 PF13439 Glycosyltransferase Family 4 AM435_RS16235 PF01569 PAP2 superfamily AM435_RS16240 PF04384 Iron-sulphur cluster assembly AM435_RS16245 PF00334 Nucleoside diphosphate kinase AM435_RS16250 PF04055 Radical SAM superfamily AM435_RS16260 PF13464 Domain of unknown function (DUF4115) AM435_RS16265 PF04551 GcpE protein AM435_RS16270 PF03129 Anticodon binding domain AM435_RS16270 PF13393 Histidyl-tRNA synthetase AM435_RS16280 PF13360 PQQ-like domain AM435_RS16285 PF01926 50S ribosome-binding GTPase AM435_RS16285 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AM435_RS16300 PF00550 Phosphopantetheine attachment site AM435_RS16305 PF00550 Phosphopantetheine attachment site AM435_RS16315 PF00501 AMP-binding enzyme AM435_RS16315 PF13193 AMP-binding enzyme C-terminal domain AM435_RS16330 PF00221 Aromatic amino acid lyase AM435_RS16350 PF04820 Tryptophan halogenase AM435_RS16360 PF00109 Beta-ketoacyl synthase, N-terminal domain AM435_RS16360 PF02801 Beta-ketoacyl synthase, C-terminal domain AM435_RS16375 PF02801 Beta-ketoacyl synthase, C-terminal domain AM435_RS16375 PF00109 Beta-ketoacyl synthase, N-terminal domain AM435_RS16390 PF02556 Preprotein translocase subunit SecB AM435_RS16395 PF00462 Glutaredoxin AM435_RS16405 PF03193 RsgA GTPase AM435_RS16410 PF00929 Exonuclease AM435_RS16425 PF02321 Outer membrane efflux protein AM435_RS16430 PF12704 MacB-like periplasmic core domain AM435_RS16430 PF02687 FtsX-like permease family AM435_RS16430 PF00005 ABC transporter AM435_RS16460 PF13603 Leucyl-tRNA synthetase, Domain 2 AM435_RS16460 PF00133 tRNA synthetases class I (I, L, M and V) AM435_RS16460 PF08264 Anticodon-binding domain of tRNA AM435_RS16460 PF09334 tRNA synthetases class I (M) AM435_RS16470 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM435_RS16470 PF00205 Thiamine pyrophosphate enzyme, central domain AM435_RS16470 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM435_RS16475 PF10369 Small subunit of acetolactate synthase AM435_RS16480 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AM435_RS16480 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AM435_RS16485 PF00563 EAL domain AM435_RS16485 PF00990 Diguanylate cyclase, GGDEF domain AM435_RS16485 PF03707 Bacterial signalling protein N terminal repeat AM435_RS16510 PF03144 Elongation factor Tu domain 2 AM435_RS16510 PF00009 Elongation factor Tu GTP binding domain AM435_RS16510 PF16658 Class II release factor RF3, C-terminal domain AM435_RS16525 PF01026 TatD related DNase AM435_RS16530 PF00330 Aconitase family (aconitate hydratase) AM435_RS16530 PF00694 Aconitase C-terminal domain AM435_RS16540 PF00899 ThiF family AM435_RS16550 PF03466 LysR substrate binding domain AM435_RS16550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM435_RS16560 PF01207 Dihydrouridine synthase (Dus) AM435_RS16565 PF07690 Major Facilitator Superfamily AM435_RS16575 PF00892 EamA-like transporter family AM435_RS16580 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AM435_RS16580 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AM435_RS16585 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AM435_RS16590 PF02233 NAD(P) transhydrogenase beta subunit AM435_RS16595 PF00106 short chain dehydrogenase AM435_RS16605 PF01261 Xylose isomerase-like TIM barrel AM435_RS16610 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AM435_RS16610 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM435_RS16615 PF00378 Enoyl-CoA hydratase/isomerase AM435_RS16620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM435_RS16620 PF00672 HAMP domain AM435_RS16620 PF00072 Response regulator receiver domain AM435_RS16620 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AM435_RS16620 PF00512 His Kinase A (phospho-acceptor) domain AM435_RS16620 PF01627 Hpt domain AM435_RS16625 PF00291 Pyridoxal-phosphate dependent enzyme AM435_RS16635 PF05958 tRNA (Uracil-5-)-methyltransferase AM435_RS16640 PF04607 Region found in RelA / SpoT proteins AM435_RS16640 PF02824 TGS domain AM435_RS16640 PF13291 ACT domain AM435_RS16650 PF03819 MazG nucleotide pyrophosphohydrolase domain AM435_RS16660 PF01743 Poly A polymerase head domain AM435_RS16660 PF12626 Polymerase A arginine-rich C-terminus AM435_RS16660 PF12627 Probable RNA and SrmB- binding site of polymerase A AM435_RS16665 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AM435_RS16670 PF02548 Ketopantoate hydroxymethyltransferase AM435_RS16675 PF02569 Pantoate-beta-alanine ligase AM435_RS16680 PF03668 P-loop ATPase protein family AM435_RS16685 PF00381 PTS HPr component phosphorylation site AM435_RS16690 PF04751 Protein of unknown function (DUF615) AM435_RS16695 PF13193 AMP-binding enzyme C-terminal domain AM435_RS16695 PF00501 AMP-binding enzyme AM435_RS16700 PF03129 Anticodon binding domain AM435_RS16700 PF02824 TGS domain AM435_RS16700 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM435_RS16700 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AM435_RS16705 PF05198 Translation initiation factor IF-3, N-terminal domain AM435_RS16705 PF00707 Translation initiation factor IF-3, C-terminal domain AM435_RS16715 PF02798 Glutathione S-transferase, N-terminal domain AM435_RS16715 PF00043 Glutathione S-transferase, C-terminal domain AM435_RS16720 PF09335 SNARE associated Golgi protein AM435_RS16725 PF07690 Major Facilitator Superfamily AM435_RS16730 PF01632 Ribosomal protein L35 AM435_RS16735 PF00453 Ribosomal protein L20 AM435_RS16755 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AM435_RS16755 PF01409 tRNA synthetases class II core domain (F) AM435_RS16760 PF03483 B3/4 domain AM435_RS16760 PF01588 Putative tRNA binding domain AM435_RS16760 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AM435_RS16760 PF03147 Ferredoxin-fold anticodon binding domain AM435_RS16760 PF03484 tRNA synthetase B5 domain AM435_RS16765 PF00216 Bacterial DNA-binding protein AM435_RS16780 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM435_RS16780 PF07498 Rho termination factor, N-terminal domain AM435_RS16780 PF07497 Rho termination factor, RNA-binding domain AM435_RS16785 PF00085 Thioredoxin AM435_RS16790 PF02541 Ppx/GppA phosphatase family AM435_RS16795 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AM435_RS16800 PF01171 PP-loop family AM435_RS16800 PF09179 TilS substrate binding domain AM435_RS16800 PF11734 TilS substrate C-terminal domain AM435_RS16805 PF14748 Pyrroline-5-carboxylate reductase dimerisation AM435_RS16805 PF03807 NADP oxidoreductase coenzyme F420-dependent AM435_RS16810 PF02325 YGGT family AM435_RS16815 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AM435_RS16815 PF01367 5'-3' exonuclease, C-terminal SAM fold AM435_RS16815 PF00476 DNA polymerase family A AM435_RS16815 PF01612 3'-5' exonuclease AM435_RS16835 PF00437 Type II/IV secretion system protein AM435_RS16840 PF02566 OsmC-like protein AM435_RS16845 PF01047 MarR family AM435_RS16855 PF00795 Carbon-nitrogen hydrolase AM435_RS16900 PF00309 Sigma-54 factor, Activator interacting domain (AID) AM435_RS16900 PF04963 Sigma-54 factor, core binding domain AM435_RS16900 PF04552 Sigma-54, DNA binding domain AM435_RS16905 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AM435_RS16910 PF01722 BolA-like protein AM435_RS16915 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AM435_RS16920 PF01634 ATP phosphoribosyltransferase AM435_RS16925 PF00815 Histidinol dehydrogenase AM435_RS16930 PF00155 Aminotransferase class I and II AM435_RS16935 PF00425 chorismate binding enzyme AM435_RS16935 PF04715 Anthranilate synthase component I, N terminal region AM435_RS16945 PF13737 Transposase DDE domain AM435_RS16970 PF00293 NUDIX domain AM435_RS16975 PF00132 Bacterial transferase hexapeptide (six repeats) AM435_RS16980 PF00814 Glycoprotease family AM435_RS16985 PF04445 Putative SAM-dependent methyltransferase AM435_RS16995 PF00756 Putative esterase AM435_RS17005 PF00834 Ribulose-phosphate 3 epimerase family AM435_RS17020 PF07732 Multicopper oxidase AM435_RS17020 PF07731 Multicopper oxidase AM435_RS17020 PF00394 Multicopper oxidase AM435_RS17025 PF05275 Copper resistance protein B precursor (CopB) AM435_RS17035 PF00893 Small Multidrug Resistance protein AM435_RS17040 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AM435_RS17040 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AM435_RS17045 PF01960 ArgJ family AM435_RS17050 PF02445 Quinolinate synthetase A protein AM435_RS17075 PF00962 Adenosine/AMP deaminase AM435_RS17080 PF08240 Alcohol dehydrogenase GroES-like domain AM435_RS17080 PF00107 Zinc-binding dehydrogenase AM435_RS17085 PF03466 LysR substrate binding domain AM435_RS17085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM435_RS17090 PF02770 Acyl-CoA dehydrogenase, middle domain AM435_RS17090 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM435_RS17090 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM435_RS17095 PF07690 Major Facilitator Superfamily AM435_RS17100 PF02515 CoA-transferase family III AM435_RS17110 PF00890 FAD binding domain AM435_RS17110 PF14537 Cytochrome c3 AM435_RS17115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM435_RS17115 PF03466 LysR substrate binding domain AM435_RS17125 PF07690 Major Facilitator Superfamily AM435_RS17135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM435_RS17135 PF03466 LysR substrate binding domain AM435_RS17145 PF01546 Peptidase family M20/M25/M40 AM435_RS17145 PF07687 Peptidase dimerisation domain AM435_RS17150 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AM435_RS17150 PF12833 Helix-turn-helix domain AM435_RS17160 PF01810 LysE type translocator AM435_RS17165 PF03466 LysR substrate binding domain AM435_RS17165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM435_RS17175 PF08267 Cobalamin-independent synthase, N-terminal domain AM435_RS17175 PF01717 Cobalamin-independent synthase, Catalytic domain AM435_RS17180 PF01613 Flavin reductase like domain AM435_RS17210 PF02567 Phenazine biosynthesis-like protein AM435_RS17230 PF01011 PQQ enzyme repeat AM435_RS17230 PF13360 PQQ-like domain AM435_RS17300 PF13936 Helix-turn-helix domain AM435_RS17300 PF00665 Integrase core domain AM435_RS17310 PF00665 Integrase core domain AM435_RS17310 PF13936 Helix-turn-helix domain AM435_RS17320 PF13755 Sensor N-terminal transmembrane domain AM435_RS17320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM435_RS17320 PF00672 HAMP domain AM435_RS17320 PF13756 Stimulus-sensing domain AM435_RS17320 PF00512 His Kinase A (phospho-acceptor) domain AM435_RS17330 PF00268 Ribonucleotide reductase, small chain AM435_RS17340 PF00317 Ribonucleotide reductase, all-alpha domain AM435_RS17340 PF03477 ATP cone domain AM435_RS17340 PF02867 Ribonucleotide reductase, barrel domain AM435_RS17350 PF00486 Transcriptional regulatory protein, C terminal AM435_RS17350 PF00072 Response regulator receiver domain AM435_RS17355 PF00512 His Kinase A (phospho-acceptor) domain AM435_RS17355 PF00672 HAMP domain AM435_RS17355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM435_RS17365 PF00990 Diguanylate cyclase, GGDEF domain AM435_RS17370 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AM435_RS17375 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AM435_RS17380 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AM435_RS17380 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AM435_RS17390 PF10531 SLBB domain AM435_RS17390 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AM435_RS17390 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AM435_RS17395 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AM435_RS17395 PF00384 Molybdopterin oxidoreductase AM435_RS17395 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM435_RS17400 PF00146 NADH dehydrogenase AM435_RS17405 PF12838 4Fe-4S dicluster domain AM435_RS17410 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AM435_RS17415 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AM435_RS17420 PF00361 Proton-conducting membrane transporter AM435_RS17420 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AM435_RS17425 PF00361 Proton-conducting membrane transporter AM435_RS17430 PF00361 Proton-conducting membrane transporter AM435_RS17440 PF00313 'Cold-shock' DNA-binding domain AM435_RS17445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM435_RS17445 PF03466 LysR substrate binding domain AM435_RS17450 PF00175 Oxidoreductase NAD-binding domain AM435_RS17450 PF00970 Oxidoreductase FAD-binding domain AM435_RS17465 PF05552 Conserved TM helix AM435_RS17480 PF00291 Pyridoxal-phosphate dependent enzyme AM435_RS17485 PF13533 Biotin-lipoyl like AM435_RS17510 PF09334 tRNA synthetases class I (M) AM435_RS17510 PF01588 Putative tRNA binding domain AM435_RS17520 PF10609 NUBPL iron-transfer P-loop NTPase AM435_RS17530 PF01048 Phosphorylase superfamily AM435_RS17545 PF00692 dUTPase AM435_RS17580 PF01207 Dihydrouridine synthase (Dus) AM435_RS17590 PF00448 SRP54-type protein, GTPase domain AM435_RS17590 PF02881 SRP54-type protein, helical bundle domain AM435_RS17590 PF02978 Signal peptide binding domain AM435_RS17595 PF03309 Type III pantothenate kinase AM435_RS17605 PF01925 Sulfite exporter TauE/SafE AM435_RS17615 PF06470 SMC proteins Flexible Hinge Domain AM435_RS17615 PF02463 RecF/RecN/SMC N terminal domain AM435_RS17625 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AM435_RS17625 PF12826 Helix-hairpin-helix motif AM435_RS17625 PF03120 NAD-dependent DNA ligase OB-fold domain AM435_RS17625 PF01653 NAD-dependent DNA ligase adenylation domain AM435_RS17625 PF00533 BRCA1 C Terminus (BRCT) domain AM435_RS17630 PF00210 Ferritin-like domain AM435_RS17635 PF07690 Major Facilitator Superfamily AM435_RS17640 PF00982 Glycosyltransferase family 20 AM435_RS17660 PF08241 Methyltransferase domain AM435_RS17660 PF12697 Alpha/beta hydrolase family AM435_RS17665 PF04055 Radical SAM superfamily AM435_RS17665 PF06968 Biotin and Thiamin Synthesis associated domain AM435_RS17665 PF00202 Aminotransferase class-III AM435_RS17670 PF00155 Aminotransferase class I and II AM435_RS17685 PF00849 RNA pseudouridylate synthase AM435_RS17685 PF01479 S4 domain AM435_RS17690 PF04079 Segregation and condensation complex subunit ScpB AM435_RS17695 PF02616 Segregation and condensation protein ScpA AM435_RS17700 PF01300 Telomere recombination AM435_RS17705 PF04315 Elongation factor P hydroxylase AM435_RS17710 PF02620 Large ribosomal RNA subunit accumulation protein YceD AM435_RS17715 PF01783 Ribosomal L32p protein family AM435_RS17720 PF00698 Acyl transferase domain AM435_RS17730 PF00550 Phosphopantetheine attachment site AM435_RS17735 PF01476 LysM domain AM435_RS17735 PF04972 BON domain AM435_RS17740 PF02581 Thiamine monophosphate synthase AM435_RS17740 PF03070 TENA/THI-4/PQQC family AM435_RS17740 PF08543 Phosphomethylpyrimidine kinase AM435_RS17750 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AM435_RS17765 PF02261 Aspartate decarboxylase AM435_RS17770 PF01195 Peptidyl-tRNA hydrolase AM435_RS17775 PF01386 Ribosomal L25p family AM435_RS17780 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AM435_RS17780 PF14572 Phosphoribosyl synthetase-associated domain AM435_RS17805 PF00288 GHMP kinases N terminal domain AM435_RS17805 PF08544 GHMP kinases C terminal AM435_RS17810 PF03550 Outer membrane lipoprotein LolB AM435_RS17820 PF01488 Shikimate / quinate 5-dehydrogenase AM435_RS17820 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AM435_RS17820 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AM435_RS17825 PF10410 DnaB-helicase binding domain of primase AM435_RS17825 PF01807 CHC2 zinc finger AM435_RS17825 PF08275 DNA primase catalytic core, N-terminal domain AM435_RS17825 PF08278 DNA primase DnaG DnaB-binding AM435_RS17830 PF13525 Outer membrane lipoprotein AM435_RS17835 PF00849 RNA pseudouridylate synthase AM435_RS17835 PF01479 S4 domain AM435_RS17840 PF02578 Multi-copper polyphenol oxidoreductase laccase AM435_RS17845 PF03358 NADPH-dependent FMN reductase AM435_RS17850 PF01668 SmpB protein AM435_RS17855 PF01467 Cytidylyltransferase-like AM435_RS17860 PF00037 4Fe-4S binding domain AM435_RS17880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM435_RS17880 PF03466 LysR substrate binding domain AM435_RS17885 PF00180 Isocitrate/isopropylmalate dehydrogenase AM435_RS17890 PF02028 BCCT, betaine/carnitine/choline family transporter AM435_RS17895 PF07859 alpha/beta hydrolase fold AM435_RS17900 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AM435_RS17900 PF00355 Rieske [2Fe-2S] domain AM435_RS17905 PF00171 Aldehyde dehydrogenase family AM435_RS17910 PF00111 2Fe-2S iron-sulfur cluster binding domain AM435_RS17910 PF00175 Oxidoreductase NAD-binding domain AM435_RS17910 PF00970 Oxidoreductase FAD-binding domain AM435_RS17925 PF02540 NAD synthase AM435_RS17925 PF00795 Carbon-nitrogen hydrolase AM435_RS17935 PF05726 Pirin C-terminal cupin domain AM435_RS17935 PF02678 Pirin AM435_RS17940 PF03653 Uncharacterised protein family (UPF0093) AM435_RS17945 PF02801 Beta-ketoacyl synthase, C-terminal domain AM435_RS17945 PF00109 Beta-ketoacyl synthase, N-terminal domain AM435_RS17955 PF00164 Ribosomal protein S12/S23 AM435_RS17960 PF00177 Ribosomal protein S7p/S5e AM435_RS17965 PF00009 Elongation factor Tu GTP binding domain AM435_RS17965 PF03764 Elongation factor G, domain IV AM435_RS17965 PF14492 Elongation Factor G, domain II AM435_RS17965 PF03144 Elongation factor Tu domain 2 AM435_RS17965 PF00679 Elongation factor G C-terminus AM435_RS17970 PF03144 Elongation factor Tu domain 2 AM435_RS17970 PF03143 Elongation factor Tu C-terminal domain AM435_RS17970 PF00009 Elongation factor Tu GTP binding domain AM435_RS17985 PF00583 Acetyltransferase (GNAT) family AM435_RS17990 PF04376 Arginine-tRNA-protein transferase, N terminus AM435_RS17990 PF04377 Arginine-tRNA-protein transferase, C terminus AM435_RS17995 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AM435_RS18005 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM435_RS18010 PF01580 FtsK/SpoIIIE family AM435_RS18010 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AM435_RS18010 PF09397 Ftsk gamma domain AM435_RS18010 PF17854 FtsK alpha domain AM435_RS18015 PF01810 LysE type translocator AM435_RS18030 PF03776 Septum formation topological specificity factor MinE AM435_RS18035 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AM435_RS18040 PF03775 Septum formation inhibitor MinC, C-terminal domain AM435_RS18050 PF01553 Acyltransferase AM435_RS18055 PF13488 Glycine zipper AM435_RS18055 PF00691 OmpA family AM435_RS18060 PF00580 UvrD/REP helicase N-terminal domain AM435_RS18060 PF13361 UvrD-like helicase C-terminal domain AM435_RS18065 PF00692 dUTPase AM435_RS18070 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM435_RS18070 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM435_RS18070 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM435_RS18070 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM435_RS18075 PF00696 Amino acid kinase family AM435_RS18085 PF13230 Glutamine amidotransferases class-II AM435_RS18090 PF01814 Hemerythrin HHE cation binding domain AM435_RS18105 PF03658 RnfH family Ubiquitin AM435_RS18110 PF04355 SmpA / OmlA family AM435_RS18115 PF01475 Ferric uptake regulator family AM435_RS18120 PF00437 Type II/IV secretion system protein AM435_RS18125 PF00437 Type II/IV secretion system protein AM435_RS18130 PF01168 Alanine racemase, N-terminal domain AM435_RS18140 PF12320 Type 5 capsule protein repressor C-terminal domain AM435_RS18140 PF00149 Calcineurin-like phosphoesterase AM435_RS18160 PF01370 NAD dependent epimerase/dehydratase family AM435_RS18160 PF08338 Domain of unknown function (DUF1731) AM435_RS18165 PF01266 FAD dependent oxidoreductase AM435_RS18170 PF00490 Delta-aminolevulinic acid dehydratase AM435_RS18175 PF03061 Thioesterase superfamily AM435_RS18180 PF13533 Biotin-lipoyl like AM435_RS18185 PF07690 Major Facilitator Superfamily AM435_RS18245 PF02384 N-6 DNA Methylase AM435_RS18245 PF12161 HsdM N-terminal domain AM435_RS18275 PF01555 DNA methylase AM435_RS18460 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system AM435_RS18475 PF10145 Phage-related minor tail protein AM435_RS18475 PF01464 Transglycosylase SLT domain AM435_RS18475 PF01551 Peptidase family M23 AM435_RS18530 PF13737 Transposase DDE domain AM435_RS18540 PF00083 Sugar (and other) transporter AM435_RS18545 PF00701 Dihydrodipicolinate synthetase family AM435_RS18555 PF04542 Sigma-70 region 2 AM435_RS18555 PF08281 Sigma-70, region 4 AM435_RS18565 PF00593 TonB dependent receptor AM435_RS18565 PF07715 TonB-dependent Receptor Plug Domain AM435_RS18575 PF04575 Protein of unknown function (DUF560) AM435_RS18585 PF01126 Heme oxygenase AM435_RS18610 PF13520 Amino acid permease AM435_RS18615 PF02574 Homocysteine S-methyltransferase AM435_RS18625 PF06039 Malate:quinone oxidoreductase (Mqo) AM435_RS18630 PF05199 GMC oxidoreductase AM435_RS18630 PF00732 GMC oxidoreductase AM435_RS18635 PF00171 Aldehyde dehydrogenase family AM435_RS18640 PF13977 BetI-type transcriptional repressor, C-terminal AM435_RS18640 PF00440 Bacterial regulatory proteins, tetR family AM435_RS18645 PF02028 BCCT, betaine/carnitine/choline family transporter AM435_RS18650 PF02028 BCCT, betaine/carnitine/choline family transporter AM435_RS18660 PF03061 Thioesterase superfamily AM435_RS18670 PF02492 CobW/HypB/UreG, nucleotide-binding domain AM435_RS18670 PF07683 Cobalamin synthesis protein cobW C-terminal domain AM435_RS18675 PF00375 Sodium:dicarboxylate symporter family AM435_RS18680 PF07152 YaeQ protein AM435_RS18685 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM435_RS18690 PF14883 Hypothetical glycosyl hydrolase family 13 AM435_RS18690 PF01522 Polysaccharide deacetylase AM435_RS18695 PF00535 Glycosyl transferase family 2 AM435_RS18705 PF00378 Enoyl-CoA hydratase/isomerase AM435_RS18720 PF01614 Bacterial transcriptional regulator AM435_RS18720 PF09339 IclR helix-turn-helix domain AM435_RS18725 PF00355 Rieske [2Fe-2S] domain AM435_RS18735 PF00355 Rieske [2Fe-2S] domain AM435_RS18745 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM435_RS18750 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM435_RS18750 PF14759 Reductase C-terminal AM435_RS18755 PF07690 Major Facilitator Superfamily AM435_RS18765 PF12697 Alpha/beta hydrolase family AM435_RS18775 PF03447 Homoserine dehydrogenase, NAD binding domain AM435_RS18775 PF01958 Domain of unknown function DUF108 AM435_RS18780 PF00171 Aldehyde dehydrogenase family AM435_RS18785 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM435_RS18785 PF00205 Thiamine pyrophosphate enzyme, central domain AM435_RS18785 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM435_RS18795 PF07690 Major Facilitator Superfamily AM435_RS18800 PF01327 Polypeptide deformylase AM435_RS18805 PF04960 Glutaminase AM435_RS18810 PF02311 AraC-like ligand binding domain AM435_RS18810 PF12833 Helix-turn-helix domain AM435_RS18815 PF07690 Major Facilitator Superfamily AM435_RS18820 PF01263 Aldose 1-epimerase AM435_RS18835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM435_RS18835 PF03466 LysR substrate binding domain AM435_RS18845 PF07690 Major Facilitator Superfamily AM435_RS18850 PF00456 Transketolase, thiamine diphosphate binding domain AM435_RS18855 PF02780 Transketolase, C-terminal domain AM435_RS18855 PF02779 Transketolase, pyrimidine binding domain AM435_RS18860 PF02607 B12 binding domain AM435_RS18860 PF02965 Vitamin B12 dependent methionine synthase, activation domain AM435_RS18860 PF02310 B12 binding domain AM435_RS18860 PF02574 Homocysteine S-methyltransferase AM435_RS18860 PF00809 Pterin binding enzyme AM435_RS18865 PF01384 Phosphate transporter family AM435_RS18870 PF00291 Pyridoxal-phosphate dependent enzyme AM435_RS18885 PF03781 Sulfatase-modifying factor enzyme 1 AM435_RS18890 PF00884 Sulfatase AM435_RS18900 PF01106 NifU-like domain AM435_RS18900 PF01521 Iron-sulphur cluster biosynthesis AM435_RS18905 PF07715 TonB-dependent Receptor Plug Domain AM435_RS18905 PF00593 TonB dependent receptor AM435_RS18915 PF00561 alpha/beta hydrolase fold AM435_RS18920 PF00484 Carbonic anhydrase AM435_RS18925 PF13472 GDSL-like Lipase/Acylhydrolase family AM435_RS18930 PF00005 ABC transporter AM435_RS18940 PF01694 Rhomboid family AM435_RS18945 PF00912 Transglycosylase AM435_RS18950 PF17941 Polyphosphate kinase C-terminal domain 1 AM435_RS18950 PF13090 Polyphosphate kinase C-terminal domain 2 AM435_RS18950 PF13089 Polyphosphate kinase N-terminal domain AM435_RS18950 PF02503 Polyphosphate kinase middle domain AM435_RS18960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM435_RS18960 PF03466 LysR substrate binding domain AM435_RS18965 PF00561 alpha/beta hydrolase fold AM435_RS18970 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM435_RS18970 PF18113 Rubredoxin binding C-terminal domain AM435_RS18975 PF00301 Rubredoxin AM435_RS18990 PF01336 OB-fold nucleic acid binding domain AM435_RS18990 PF00152 tRNA synthetases class II (D, K and N) AM435_RS18995 PF14052 Capsule assembly protein Wzi AM435_RS19005 PF01507 Phosphoadenosine phosphosulfate reductase family AM435_RS19010 PF00009 Elongation factor Tu GTP binding domain AM435_RS19025 PF13737 Transposase DDE domain AM435_RS19035 PF03466 LysR substrate binding domain AM435_RS19035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM435_RS19040 PF00463 Isocitrate lyase family AM435_RS19055 PF01774 UreD urease accessory protein AM435_RS19060 PF00547 Urease, gamma subunit AM435_RS19065 PF00699 Urease beta subunit AM435_RS19070 PF01979 Amidohydrolase family AM435_RS19070 PF00449 Urease alpha-subunit, N-terminal domain AM435_RS19075 PF05194 UreE urease accessory protein, C-terminal domain AM435_RS19075 PF02814 UreE urease accessory protein, N-terminal domain AM435_RS19080 PF01730 UreF AM435_RS19085 PF02492 CobW/HypB/UreG, nucleotide-binding domain AM435_RS19100 PF00905 Penicillin binding protein transpeptidase domain AM435_RS19100 PF03717 Penicillin-binding Protein dimerisation domain AM435_RS19115 PF05191 Adenylate kinase, active site lid AM435_RS19125 PF00730 HhH-GPD superfamily base excision DNA repair protein AM435_RS19125 PF00633 Helix-hairpin-helix motif AM435_RS19125 PF10576 Iron-sulfur binding domain of endonuclease III AM435_RS19130 PF04060 Putative Fe-S cluster AM435_RS19135 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AM435_RS19135 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AM435_RS19145 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AM435_RS19150 PF02590 Predicted SPOUT methyltransferase AM435_RS19155 PF00004 ATPase family associated with various cellular activities (AAA) AM435_RS19155 PF02190 ATP-dependent protease La (LON) substrate-binding domain AM435_RS19155 PF05362 Lon protease (S16) C-terminal proteolytic domain AM435_RS19160 PF13018 Extended Signal Peptide of Type V secretion system AM435_RS19160 PF05658 Head domain of trimeric autotransporter adhesin AM435_RS19160 PF05662 Coiled stalk of trimeric autotransporter adhesin AM435_RS19160 PF03895 YadA-like membrane anchor domain AM435_RS19165 PF04355 SmpA / OmlA family AM435_RS19165 PF00691 OmpA family AM435_RS19170 PF01812 5-formyltetrahydrofolate cyclo-ligase family AM435_RS19500 PF03869 Arc-like DNA binding domain AM435_RS19540 PF13737 Transposase DDE domain AM435_RS19550 PF00854 POT family AM435_RS19555 PF00120 Glutamine synthetase, catalytic domain AM435_RS19555 PF03951 Glutamine synthetase, beta-Grasp domain AM435_RS19560 PF04345 Chorismate lyase AM435_RS19565 PF01040 UbiA prenyltransferase family AM435_RS19600 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AM435_RS19600 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AM435_RS19605 PF01784 NIF3 (NGG1p interacting factor 3) AM435_RS19610 PF13180 PDZ domain AM435_RS19615 PF12627 Probable RNA and SrmB- binding site of polymerase A AM435_RS19615 PF01743 Poly A polymerase head domain AM435_RS19620 PF01515 Phosphate acetyl/butaryl transferase AM435_RS19620 PF03949 Malic enzyme, NAD binding domain AM435_RS19620 PF00390 Malic enzyme, N-terminal domain AM435_RS19625 PF00990 Diguanylate cyclase, GGDEF domain AM435_RS19625 PF03707 Bacterial signalling protein N terminal repeat AM435_RS19625 PF00563 EAL domain AM435_RS19630 PF04452 RNA methyltransferase AM435_RS19635 PF02219 Methylenetetrahydrofolate reductase AM435_RS19640 PF05221 S-adenosyl-L-homocysteine hydrolase AM435_RS19640 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AM435_RS19655 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM435_RS19655 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM435_RS19655 PF09317 Domain of unknown function (DUF1974) AM435_RS19660 PF04055 Radical SAM superfamily AM435_RS19665 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM435_RS19665 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM435_RS19675 PF07690 Major Facilitator Superfamily AM435_RS19685 PF00557 Metallopeptidase family M24 AM435_RS19690 PF00318 Ribosomal protein S2 AM435_RS19695 PF00889 Elongation factor TS AM435_RS19705 PF12833 Helix-turn-helix domain AM435_RS19725 PF03330 Lytic transglycolase AM435_RS19725 PF05036 Sporulation related domain AM435_RS19730 PF13406 Transglycosylase SLT domain AM435_RS19735 PF01098 Cell cycle protein AM435_RS19745 PF14489 QueF-like protein AM435_RS19745 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AM435_RS19750 PF01061 ABC-2 type transporter AM435_RS19755 PF00005 ABC transporter AM435_RS19785 PF00464 Serine hydroxymethyltransferase AM435_RS19790 PF02321 Outer membrane efflux protein AM435_RS19795 PF00873 AcrB/AcrD/AcrF family AM435_RS19800 PF13533 Biotin-lipoyl like AM435_RS19805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM435_RS19805 PF03466 LysR substrate binding domain AM435_RS19810 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM435_RS19815 PF00528 Binding-protein-dependent transport system inner membrane component AM435_RS19820 PF00528 Binding-protein-dependent transport system inner membrane component AM435_RS19825 PF00005 ABC transporter AM435_RS19830 PF00893 Small Multidrug Resistance protein AM435_RS19835 PF00037 4Fe-4S binding domain AM435_RS19840 PF16325 Peptidase family U32 C-terminal domain AM435_RS19840 PF01136 Peptidase family U32 AM435_RS19845 PF00155 Aminotransferase class I and II AM435_RS19845 PF00392 Bacterial regulatory proteins, gntR family AM435_RS19850 PF02567 Phenazine biosynthesis-like protein AM435_RS19855 PF00970 Oxidoreductase FAD-binding domain AM435_RS19855 PF00175 Oxidoreductase NAD-binding domain AM435_RS19860 PF01980 tRNA-methyltransferase O AM435_RS19860 PF18389 TrmO C-terminal domain AM435_RS19870 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AM435_RS19870 PF00437 Type II/IV secretion system protein AM435_RS19880 PF00486 Transcriptional regulatory protein, C terminal AM435_RS19880 PF00072 Response regulator receiver domain AM435_RS19885 PF00512 His Kinase A (phospho-acceptor) domain AM435_RS19885 PF08521 Two-component sensor kinase N-terminal AM435_RS19885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM435_RS19895 PF00293 NUDIX domain AM435_RS19905 PF00912 Transglycosylase AM435_RS19905 PF14814 Bifunctional transglycosylase second domain AM435_RS19905 PF00905 Penicillin binding protein transpeptidase domain AM435_RS19910 PF01513 ATP-NAD kinase AM435_RS19915 PF07023 Protein of unknown function (DUF1315) AM435_RS19920 PF00591 Glycosyl transferase family, a/b domain AM435_RS19920 PF02885 Glycosyl transferase family, helical bundle domain AM435_RS19930 PF00375 Sodium:dicarboxylate symporter family AM435_RS19935 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM435_RS19935 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM435_RS19935 PF02770 Acyl-CoA dehydrogenase, middle domain AM435_RS19940 PF00756 Putative esterase AM435_RS19945 PF00800 Prephenate dehydratase AM435_RS19945 PF01817 Chorismate mutase type II AM435_RS19945 PF01842 ACT domain AM435_RS19950 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AM435_RS19960 PF07687 Peptidase dimerisation domain AM435_RS19960 PF01546 Peptidase family M20/M25/M40 AM435_RS19965 PF12706 Beta-lactamase superfamily domain AM435_RS19975 PF03883 Peroxide stress protein YaaA AM435_RS19985 PF05690 Thiazole biosynthesis protein ThiG AM435_RS19995 PF04241 Protein of unknown function (DUF423) AM435_RS20000 PF04542 Sigma-70 region 2 AM435_RS20000 PF04545 Sigma-70, region 4 AM435_RS20000 PF00140 Sigma-70 factor, region 1.2 AM435_RS20010 PF00313 'Cold-shock' DNA-binding domain AM435_RS20015 PF00270 DEAD/DEAH box helicase AM435_RS20015 PF00271 Helicase conserved C-terminal domain AM435_RS20025 PF00881 Nitroreductase family AM435_RS20030 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AM435_RS20030 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AM435_RS20050 PF01180 Dihydroorotate dehydrogenase AM435_RS20055 PF02674 Colicin V production protein AM435_RS20060 PF00156 Phosphoribosyl transferase domain AM435_RS20075 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM435_RS20075 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM435_RS20080 PF01435 Peptidase family M48 AM435_RS20085 PF09424 Yqey-like protein AM435_RS20090 PF01165 Ribosomal protein S21 AM435_RS20095 PF00814 Glycoprotease family AM435_RS20115 PF00069 Protein kinase domain AM435_RS20150 PF00171 Aldehyde dehydrogenase family AM435_RS20155 PF00324 Amino acid permease AM435_RS20185 PF04076 Bacterial OB fold (BOF) protein AM435_RS20210 PF00561 alpha/beta hydrolase fold AM435_RS20215 PF03616 Sodium/glutamate symporter AM435_RS20225 PF07729 FCD domain AM435_RS20225 PF00392 Bacterial regulatory proteins, gntR family AM435_RS20245 PF13737 Transposase DDE domain AM435_RS20280 PF08946 Osmosensory transporter coiled coil AM435_RS20280 PF00083 Sugar (and other) transporter AM435_RS20305 PF00155 Aminotransferase class I and II AM435_RS20310 PF02080 TrkA-C domain AM435_RS20310 PF06826 Predicted Permease Membrane Region AM435_RS20315 PF13737 Transposase DDE domain AM435_RS20325 PF04403 Paraquat-inducible protein A AM435_RS20330 PF02470 MlaD protein AM435_RS20350 PF01177 Asp/Glu/Hydantoin racemase AM435_RS20355 PF00892 EamA-like transporter family AM435_RS20360 PF07995 Glucose / Sorbosone dehydrogenase AM435_RS20380 PF00375 Sodium:dicarboxylate symporter family AM435_RS20395 PF00753 Metallo-beta-lactamase superfamily AM435_RS20395 PF16123 Hydroxyacylglutathione hydrolase C-terminus AM435_RS20400 PF00528 Binding-protein-dependent transport system inner membrane component AM435_RS20405 PF09383 NIL domain AM435_RS20405 PF00005 ABC transporter AM435_RS20410 PF03180 NLPA lipoprotein AM435_RS20415 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AM435_RS20415 PF02843 Phosphoribosylglycinamide synthetase, C domain AM435_RS20415 PF02844 Phosphoribosylglycinamide synthetase, N domain AM435_RS20420 PF01808 AICARFT/IMPCHase bienzyme AM435_RS20420 PF02142 MGS-like domain AM435_RS20425 PF02954 Bacterial regulatory protein, Fis family AM435_RS20445 PF13932 GidA associated domain AM435_RS20445 PF01134 Glucose inhibited division protein A AM435_RS20455 PF14403 Circularly permuted ATP-grasp type 2 AM435_RS20465 PF08379 Bacterial transglutaminase-like N-terminal region AM435_RS20465 PF01841 Transglutaminase-like superfamily AM435_RS20475 PF00842 Alanine racemase, C-terminal domain AM435_RS20475 PF01168 Alanine racemase, N-terminal domain AM435_RS20480 PF03796 DnaB-like helicase C terminal domain AM435_RS20480 PF00772 DnaB-like helicase N terminal domain AM435_RS20485 PF01281 Ribosomal protein L9, N-terminal domain AM435_RS20485 PF03948 Ribosomal protein L9, C-terminal domain AM435_RS20490 PF01084 Ribosomal protein S18 AM435_RS20495 PF01250 Ribosomal protein S6 AM435_RS20500 PF01040 UbiA prenyltransferase family AM435_RS20505 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AM435_RS20510 PF00510 Cytochrome c oxidase subunit III AM435_RS20515 PF00115 Cytochrome C and Quinol oxidase polypeptide I AM435_RS20520 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AM435_RS20520 PF06481 COX Aromatic Rich Motif AM435_RS20530 PF02896 PEP-utilising enzyme, TIM barrel domain AM435_RS20530 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AM435_RS20530 PF00391 PEP-utilising enzyme, mobile domain AM435_RS20535 PF03618 Kinase/pyrophosphorylase AM435_RS20555 PF14883 Hypothetical glycosyl hydrolase family 13 AM435_RS20555 PF01522 Polysaccharide deacetylase AM435_RS20560 PF00535 Glycosyl transferase family 2 AM435_RS20565 PF13994 PgaD-like protein AM435_RS20575 PF00296 Luciferase-like monooxygenase AM435_RS20595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM435_RS20595 PF03466 LysR substrate binding domain AM435_RS20605 PF00472 RF-1 domain AM435_RS20605 PF03462 PCRF domain AM435_RS20610 PF17827 PrmC N-terminal domain AM435_RS20610 PF13847 Methyltransferase domain AM435_RS20615 PF00528 Binding-protein-dependent transport system inner membrane component AM435_RS20620 PF09084 NMT1/THI5 like AM435_RS20625 PF12833 Helix-turn-helix domain AM435_RS20630 PF00106 short chain dehydrogenase AM435_RS20635 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM435_RS20635 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM435_RS20635 PF02770 Acyl-CoA dehydrogenase, middle domain AM435_RS20640 PF13193 AMP-binding enzyme C-terminal domain AM435_RS20640 PF00501 AMP-binding enzyme AM435_RS20645 PF01613 Flavin reductase like domain AM435_RS20650 PF00899 ThiF family AM435_RS20655 PF03109 ABC1 family AM435_RS20670 PF03814 Potassium-transporting ATPase A subunit AM435_RS20680 PF02669 K+-transporting ATPase, c chain AM435_RS20685 PF02702 Osmosensitive K+ channel His kinase sensor domain AM435_RS20685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM435_RS20685 PF00512 His Kinase A (phospho-acceptor) domain AM435_RS20685 PF13493 Domain of unknown function (DUF4118) AM435_RS20690 PF00072 Response regulator receiver domain AM435_RS20690 PF00486 Transcriptional regulatory protein, C terminal AM435_RS20695 PF00120 Glutamine synthetase, catalytic domain AM435_RS20705 PF03232 Ubiquinone biosynthesis protein COQ7 AM435_RS20710 PF07690 Major Facilitator Superfamily AM435_RS20715 PF17243 POTRA domain TamA domain 1 AM435_RS20715 PF07244 Surface antigen variable number repeat AM435_RS20715 PF01103 Surface antigen AM435_RS20755 PF00593 TonB dependent receptor AM435_RS20755 PF07715 TonB-dependent Receptor Plug Domain