locus-tag class description AM442_RS00010 PF04002 RadC-like JAB domain AM442_RS00015 PF01062 Bestrophin, RFP-TM, chloride channel AM442_RS00020 PF02811 PHP domain AM442_RS00025 PF04279 Intracellular septation protein A AM442_RS00030 PF03795 YCII-related domain AM442_RS00040 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AM442_RS00040 PF01266 FAD dependent oxidoreductase AM442_RS00050 PF04461 Protein of unknown function (DUF520) AM442_RS00060 PF03061 Thioesterase superfamily AM442_RS00065 PF00085 Thioredoxin AM442_RS00070 PF00561 alpha/beta hydrolase fold AM442_RS00075 PF00753 Metallo-beta-lactamase superfamily AM442_RS00075 PF04273 Putative phosphatase (DUF442) AM442_RS00085 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM442_RS00085 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM442_RS00120 PF00990 Diguanylate cyclase, GGDEF domain AM442_RS00120 PF17152 Periplasmic sensor domain AM442_RS00125 PF00691 OmpA family AM442_RS00125 PF01389 OmpA-like transmembrane domain AM442_RS00130 PF10518 TAT (twin-arginine translocation) pathway signal sequence AM442_RS00130 PF00149 Calcineurin-like phosphoesterase AM442_RS00135 PF13091 PLD-like domain AM442_RS00145 PF16360 GTP-binding GTPase Middle Region AM442_RS00145 PF13167 GTP-binding GTPase N-terminal AM442_RS00145 PF01926 50S ribosome-binding GTPase AM442_RS00165 PF00149 Calcineurin-like phosphoesterase AM442_RS00170 PF00398 Ribosomal RNA adenine dimethylase AM442_RS00175 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AM442_RS00180 PF00572 Ribosomal protein L13 AM442_RS00185 PF00380 Ribosomal protein S9/S16 AM442_RS00190 PF13417 Glutathione S-transferase, N-terminal domain AM442_RS00190 PF00043 Glutathione S-transferase, C-terminal domain AM442_RS00195 PF04386 Stringent starvation protein B AM442_RS00205 PF00289 Biotin carboxylase, N-terminal domain AM442_RS00205 PF00364 Biotin-requiring enzyme AM442_RS00205 PF02785 Biotin carboxylase C-terminal domain AM442_RS00205 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM442_RS00210 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM442_RS00210 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM442_RS00210 PF00378 Enoyl-CoA hydratase/isomerase AM442_RS00215 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM442_RS00215 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM442_RS00215 PF02770 Acyl-CoA dehydrogenase, middle domain AM442_RS00220 PF01039 Carboxyl transferase domain AM442_RS00235 PF00440 Bacterial regulatory proteins, tetR family AM442_RS00235 PF17932 Tetracyclin repressor-like, C-terminal domain AM442_RS00240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM442_RS00240 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM442_RS00240 PF02770 Acyl-CoA dehydrogenase, middle domain AM442_RS00290 PF01066 CDP-alcohol phosphatidyltransferase AM442_RS00295 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AM442_RS00315 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AM442_RS00315 PF00056 lactate/malate dehydrogenase, NAD binding domain AM442_RS00325 PF01551 Peptidase family M23 AM442_RS00325 PF10145 Phage-related minor tail protein AM442_RS00325 PF01464 Transglycosylase SLT domain AM442_RS00330 PF04055 Radical SAM superfamily AM442_RS00330 PF01938 TRAM domain AM442_RS00330 PF00919 Uncharacterized protein family UPF0004 AM442_RS00335 PF02562 PhoH-like protein AM442_RS00340 PF02130 Uncharacterized protein family UPF0054 AM442_RS00365 PF03358 NADPH-dependent FMN reductase AM442_RS00370 PF03631 Virulence factor BrkB AM442_RS00375 PF00892 EamA-like transporter family AM442_RS00385 PF01557 Fumarylacetoacetate (FAA) hydrolase family AM442_RS00430 PF00575 S1 RNA binding domain AM442_RS00430 PF00773 RNB domain AM442_RS00430 PF08206 Ribonuclease B OB domain AM442_RS00430 PF08461 Ribonuclease R winged-helix domain AM442_RS00430 PF17876 Cold shock domain AM442_RS00435 PF01432 Peptidase family M3 AM442_RS00440 PF09526 Probable metal-binding protein (DUF2387) AM442_RS00470 PF03937 Flavinator of succinate dehydrogenase AM442_RS00475 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM442_RS00475 PF02770 Acyl-CoA dehydrogenase, middle domain AM442_RS00475 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM442_RS00480 PF00743 Flavin-binding monooxygenase-like AM442_RS00485 PF01196 Ribosomal protein L17 AM442_RS00490 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AM442_RS00490 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AM442_RS00490 PF01000 RNA polymerase Rpb3/RpoA insert domain AM442_RS00495 PF01479 S4 domain AM442_RS00495 PF00163 Ribosomal protein S4/S9 N-terminal domain AM442_RS00500 PF00411 Ribosomal protein S11 AM442_RS00505 PF00416 Ribosomal protein S13/S18 AM442_RS00510 PF00444 Ribosomal protein L36 AM442_RS00515 PF00344 SecY translocase AM442_RS00520 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AM442_RS00525 PF00327 Ribosomal protein L30p/L7e AM442_RS00530 PF00333 Ribosomal protein S5, N-terminal domain AM442_RS00530 PF03719 Ribosomal protein S5, C-terminal domain AM442_RS00535 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AM442_RS00540 PF00347 Ribosomal protein L6 AM442_RS00545 PF00410 Ribosomal protein S8 AM442_RS00550 PF00253 Ribosomal protein S14p/S29e AM442_RS00555 PF00281 Ribosomal protein L5 AM442_RS00555 PF00673 ribosomal L5P family C-terminus AM442_RS00560 PF00467 KOW motif AM442_RS00560 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AM442_RS00565 PF00238 Ribosomal protein L14p/L23e AM442_RS00570 PF00366 Ribosomal protein S17 AM442_RS00575 PF00831 Ribosomal L29 protein AM442_RS00580 PF00252 Ribosomal protein L16p/L10e AM442_RS00585 PF00189 Ribosomal protein S3, C-terminal domain AM442_RS00585 PF07650 KH domain AM442_RS00590 PF00237 Ribosomal protein L22p/L17e AM442_RS00595 PF00203 Ribosomal protein S19 AM442_RS00600 PF00181 Ribosomal Proteins L2, RNA binding domain AM442_RS00600 PF03947 Ribosomal Proteins L2, C-terminal domain AM442_RS00605 PF00276 Ribosomal protein L23 AM442_RS00610 PF00573 Ribosomal protein L4/L1 family AM442_RS00615 PF00297 Ribosomal protein L3 AM442_RS00620 PF00338 Ribosomal protein S10p/S20e AM442_RS00625 PF00117 Glutamine amidotransferase class-I AM442_RS00630 PF01053 Cys/Met metabolism PLP-dependent enzyme AM442_RS00635 PF05872 Bacterial protein of unknown function (DUF853) AM442_RS00645 PF00970 Oxidoreductase FAD-binding domain AM442_RS00645 PF00175 Oxidoreductase NAD-binding domain AM442_RS00645 PF00042 Globin AM442_RS00650 PF02082 Transcriptional regulator AM442_RS00655 PF01926 50S ribosome-binding GTPase AM442_RS00665 PF00375 Sodium:dicarboxylate symporter family AM442_RS00675 PF01553 Acyltransferase AM442_RS00690 PF00271 Helicase conserved C-terminal domain AM442_RS00690 PF17191 RecG wedge domain AM442_RS00690 PF00270 DEAD/DEAH box helicase AM442_RS00695 PF00156 Phosphoribosyl transferase domain AM442_RS00700 PF00293 NUDIX domain AM442_RS00705 PF03641 Possible lysine decarboxylase AM442_RS00710 PF01544 CorA-like Mg2+ transporter protein AM442_RS00720 PF05494 MlaC protein AM442_RS00730 PF02405 Permease MlaE AM442_RS00735 PF00005 ABC transporter AM442_RS00740 PF00270 DEAD/DEAH box helicase AM442_RS00740 PF00271 Helicase conserved C-terminal domain AM442_RS00740 PF12343 Cold shock protein DEAD box A AM442_RS00740 PF03880 DbpA RNA binding domain AM442_RS00745 PF00459 Inositol monophosphatase family AM442_RS00750 PF02779 Transketolase, pyrimidine binding domain AM442_RS00750 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AM442_RS00750 PF02780 Transketolase, C-terminal domain AM442_RS00755 PF00925 GTP cyclohydrolase II AM442_RS00760 PF01218 Coproporphyrinogen III oxidase AM442_RS00765 PF08501 Shikimate dehydrogenase substrate binding domain AM442_RS00765 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AM442_RS00765 PF01488 Shikimate / quinate 5-dehydrogenase AM442_RS00775 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM442_RS00775 PF12806 Acetyl-CoA dehydrogenase C-terminal like AM442_RS00775 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM442_RS00775 PF02770 Acyl-CoA dehydrogenase, middle domain AM442_RS00785 PF04024 PspC domain AM442_RS00790 PF00571 CBS domain AM442_RS00815 PF02091 Glycyl-tRNA synthetase alpha subunit AM442_RS00820 PF02092 Glycyl-tRNA synthetase beta subunit AM442_RS00820 PF05746 DALR anticodon binding domain AM442_RS00825 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system AM442_RS00855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM442_RS00855 PF03466 LysR substrate binding domain AM442_RS00870 PF00082 Subtilase family AM442_RS00870 PF05922 Peptidase inhibitor I9 AM442_RS00885 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AM442_RS00890 PF04996 Succinylarginine dihydrolase AM442_RS00895 PF00171 Aldehyde dehydrogenase family AM442_RS00900 PF04958 Arginine N-succinyltransferase beta subunit AM442_RS00905 PF00202 Aminotransferase class-III AM442_RS00910 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AM442_RS00910 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AM442_RS00915 PF00324 Amino acid permease AM442_RS00925 PF08241 Methyltransferase domain AM442_RS00945 PF13614 AAA domain AM442_RS00950 PF01594 AI-2E family transporter AM442_RS00955 PF00080 Copper/zinc superoxide dismutase (SODC) AM442_RS00960 PF12805 FUSC-like inner membrane protein yccS AM442_RS00965 PF07690 Major Facilitator Superfamily AM442_RS00975 PF02525 Flavodoxin-like fold AM442_RS00980 PF03992 Antibiotic biosynthesis monooxygenase AM442_RS01005 PF01565 FAD binding domain AM442_RS01005 PF02913 FAD linked oxidases, C-terminal domain AM442_RS01010 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM442_RS01010 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM442_RS01015 PF00892 EamA-like transporter family AM442_RS01020 PF00892 EamA-like transporter family AM442_RS01030 PF01925 Sulfite exporter TauE/SafE AM442_RS01035 PF16198 tRNA pseudouridylate synthase B C-terminal domain AM442_RS01035 PF01509 TruB family pseudouridylate synthase (N terminal domain) AM442_RS01035 PF09157 Pseudouridine synthase II TruB, C-terminal AM442_RS01040 PF03280 Proteobacterial lipase chaperone protein AM442_RS01045 PF00561 alpha/beta hydrolase fold AM442_RS01050 PF01245 Ribosomal protein L19 AM442_RS01055 PF01746 tRNA (Guanine-1)-methyltransferase AM442_RS01060 PF01782 RimM N-terminal domain AM442_RS01060 PF05239 PRC-barrel domain AM442_RS01065 PF00886 Ribosomal protein S16 AM442_RS01105 PF02401 LytB protein AM442_RS01110 PF00625 Guanylate kinase AM442_RS01115 PF01192 RNA polymerase Rpb6 AM442_RS01125 PF04607 Region found in RelA / SpoT proteins AM442_RS01125 PF13291 ACT domain AM442_RS01125 PF02824 TGS domain AM442_RS01130 PF01042 Endoribonuclease L-PSP AM442_RS01135 PF04324 BFD-like [2Fe-2S] binding domain AM442_RS01140 PF00210 Ferritin-like domain AM442_RS01145 PF15864 Protein glycosylation ligase AM442_RS01145 PF04932 O-Antigen ligase AM442_RS01145 PF11846 Virulence factor membrane-bound polymerase, C-terminal AM442_RS01150 PF00114 Pilin (bacterial filament) AM442_RS01150 PF07963 Prokaryotic N-terminal methylation motif AM442_RS01160 PF04536 TPM domain AM442_RS01165 PF04011 LemA family AM442_RS01175 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM442_RS01175 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AM442_RS01180 PF00310 Glutamine amidotransferases class-II AM442_RS01180 PF01645 Conserved region in glutamate synthase AM442_RS01180 PF01493 GXGXG motif AM442_RS01180 PF04898 Glutamate synthase central domain AM442_RS01190 PF01761 3-dehydroquinate synthase AM442_RS01195 PF01202 Shikimate kinase AM442_RS01200 PF03958 Bacterial type II/III secretion system short domain AM442_RS01200 PF07660 Secretin and TonB N terminus short domain AM442_RS01200 PF11741 AMIN domain AM442_RS01200 PF00263 Bacterial type II and III secretion system protein AM442_RS01210 PF04350 Pilus assembly protein, PilO AM442_RS01215 PF05137 Fimbrial assembly protein (PilN) AM442_RS01220 PF11104 Type IV pilus assembly protein PilM; AM442_RS01225 PF00905 Penicillin binding protein transpeptidase domain AM442_RS01225 PF17092 Penicillin-binding protein OB-like domain AM442_RS01225 PF00912 Transglycosylase AM442_RS01230 PF13847 Methyltransferase domain AM442_RS01240 PF00953 Glycosyl transferase family 4 AM442_RS01245 PF01225 Mur ligase family, catalytic domain AM442_RS01245 PF08245 Mur ligase middle domain AM442_RS01245 PF02875 Mur ligase family, glutamate ligase domain AM442_RS01250 PF01225 Mur ligase family, catalytic domain AM442_RS01250 PF02875 Mur ligase family, glutamate ligase domain AM442_RS01250 PF08245 Mur ligase middle domain AM442_RS01255 PF00905 Penicillin binding protein transpeptidase domain AM442_RS01255 PF03717 Penicillin-binding Protein dimerisation domain AM442_RS01265 PF01795 MraW methylase family AM442_RS01280 PF00749 tRNA synthetases class I (E and Q), catalytic domain AM442_RS01295 PF00324 Amino acid permease AM442_RS01325 PF01545 Cation efflux family AM442_RS01330 PF00873 AcrB/AcrD/AcrF family AM442_RS01335 PF00529 HlyD membrane-fusion protein of T1SS AM442_RS01335 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM442_RS01355 PF04191 Phospholipid methyltransferase AM442_RS01380 PF00005 ABC transporter AM442_RS01380 PF12848 ABC transporter AM442_RS01385 PF01053 Cys/Met metabolism PLP-dependent enzyme AM442_RS01390 PF00106 short chain dehydrogenase AM442_RS01395 PF00916 Sulfate permease family AM442_RS01395 PF01740 STAS domain AM442_RS01400 PF17674 HHH domain AM442_RS01400 PF16921 Tex protein YqgF-like domain AM442_RS01400 PF09371 Tex-like protein N-terminal domain AM442_RS01400 PF00575 S1 RNA binding domain AM442_RS01410 PF00072 Response regulator receiver domain AM442_RS01410 PF00486 Transcriptional regulatory protein, C terminal AM442_RS01415 PF00512 His Kinase A (phospho-acceptor) domain AM442_RS01415 PF00672 HAMP domain AM442_RS01415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM442_RS01425 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AM442_RS01425 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AM442_RS01430 PF00583 Acetyltransferase (GNAT) family AM442_RS01450 PF00475 Imidazoleglycerol-phosphate dehydratase AM442_RS01455 PF00117 Glutamine amidotransferase class-I AM442_RS01470 PF00977 Histidine biosynthesis protein AM442_RS01485 PF03992 Antibiotic biosynthesis monooxygenase AM442_RS01500 PF01636 Phosphotransferase enzyme family AM442_RS01505 PF00977 Histidine biosynthesis protein AM442_RS01520 PF00230 Major intrinsic protein AM442_RS01545 PF02705 K+ potassium transporter AM442_RS01565 PF00809 Pterin binding enzyme AM442_RS01570 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM442_RS01570 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM442_RS01570 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM442_RS01570 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM442_RS01585 PF13610 DDE domain AM442_RS01595 PF02525 Flavodoxin-like fold AM442_RS01605 PF01638 HxlR-like helix-turn-helix AM442_RS01635 PF02311 AraC-like ligand binding domain AM442_RS01635 PF12833 Helix-turn-helix domain AM442_RS01640 PF00248 Aldo/keto reductase family AM442_RS01660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM442_RS01660 PF03466 LysR substrate binding domain AM442_RS01665 PF07690 Major Facilitator Superfamily AM442_RS01675 PF00324 Amino acid permease AM442_RS01680 PF00171 Aldehyde dehydrogenase family AM442_RS01695 PF13556 PucR C-terminal helix-turn-helix domain AM442_RS01695 PF17853 GGDEF-like domain AM442_RS01695 PF06018 CodY GAF-like domain AM442_RS01700 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AM442_RS01700 PF12833 Helix-turn-helix domain AM442_RS01725 PF01593 Flavin containing amine oxidoreductase AM442_RS01730 PF02678 Pirin AM442_RS01730 PF05726 Pirin C-terminal cupin domain AM442_RS01735 PF00857 Isochorismatase family AM442_RS01740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM442_RS01745 PF00171 Aldehyde dehydrogenase family AM442_RS01750 PF00202 Aminotransferase class-III AM442_RS01755 PF00392 Bacterial regulatory proteins, gntR family AM442_RS01755 PF00155 Aminotransferase class I and II AM442_RS01760 PF00324 Amino acid permease AM442_RS01770 PF03591 AzlC protein AM442_RS01780 PF00436 Single-strand binding protein family AM442_RS01785 PF07690 Major Facilitator Superfamily AM442_RS01795 PF03070 TENA/THI-4/PQQC family AM442_RS01795 PF08543 Phosphomethylpyrimidine kinase AM442_RS01795 PF02581 Thiamine monophosphate synthase AM442_RS01800 PF06942 GlpM protein AM442_RS01810 PF08240 Alcohol dehydrogenase GroES-like domain AM442_RS01810 PF00107 Zinc-binding dehydrogenase AM442_RS01815 PF16925 Tetracyclin repressor-like, C-terminal domain AM442_RS01815 PF00440 Bacterial regulatory proteins, tetR family AM442_RS01820 PF17755 UvrA DNA-binding domain AM442_RS01820 PF00005 ABC transporter AM442_RS01820 PF17760 UvrA interaction domain AM442_RS01825 PF00990 Diguanylate cyclase, GGDEF domain AM442_RS01835 PF02028 BCCT, betaine/carnitine/choline family transporter AM442_RS01845 PF00474 Sodium:solute symporter family AM442_RS01850 PF04341 Protein of unknown function, DUF485 AM442_RS01855 PF00072 Response regulator receiver domain AM442_RS01855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM442_RS01855 PF01627 Hpt domain AM442_RS01855 PF00672 HAMP domain AM442_RS01855 PF00512 His Kinase A (phospho-acceptor) domain AM442_RS01865 PF00072 Response regulator receiver domain AM442_RS01865 PF00196 Bacterial regulatory proteins, luxR family AM442_RS01870 PF03358 NADPH-dependent FMN reductase AM442_RS01875 PF00296 Luciferase-like monooxygenase AM442_RS01880 PF01037 Lrp/AsnC ligand binding domain AM442_RS01885 PF00857 Isochorismatase family AM442_RS01890 PF00501 AMP-binding enzyme AM442_RS01890 PF16177 Acetyl-coenzyme A synthetase N-terminus AM442_RS01890 PF13193 AMP-binding enzyme C-terminal domain AM442_RS01900 PF00924 Mechanosensitive ion channel AM442_RS01905 PF04452 RNA methyltransferase AM442_RS01910 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AM442_RS01915 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM442_RS01935 PF06594 Haemolysin-type calcium binding protein related domain AM442_RS01935 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) AM442_RS01950 PF17768 RecJ OB domain AM442_RS01950 PF01368 DHH family AM442_RS01950 PF02272 DHHA1 domain AM442_RS01955 PF01243 Pyridoxamine 5'-phosphate oxidase AM442_RS01955 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AM442_RS01960 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM442_RS01960 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM442_RS01960 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM442_RS01960 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM442_RS01965 PF00478 IMP dehydrogenase / GMP reductase domain AM442_RS01965 PF00571 CBS domain AM442_RS01970 PF03692 Putative zinc- or iron-chelating domain AM442_RS01975 PF00258 Flavodoxin AM442_RS01975 PF01613 Flavin reductase like domain AM442_RS01980 PF07715 TonB-dependent Receptor Plug Domain AM442_RS01980 PF00593 TonB dependent receptor AM442_RS01985 PF01169 Uncharacterized protein family UPF0016 AM442_RS01995 PF02817 e3 binding domain AM442_RS01995 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AM442_RS01995 PF00364 Biotin-requiring enzyme AM442_RS02000 PF17831 Pyruvate dehydrogenase E1 component middle domain AM442_RS02000 PF00456 Transketolase, thiamine diphosphate binding domain AM442_RS02005 PF01551 Peptidase family M23 AM442_RS02015 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AM442_RS02020 PF00091 Tubulin/FtsZ family, GTPase domain AM442_RS02020 PF12327 FtsZ family, C-terminal domain AM442_RS02025 PF02491 SHS2 domain inserted in FTSA AM442_RS02030 PF08478 POTRA domain, FtsQ-type AM442_RS02030 PF03799 Cell division protein FtsQ AM442_RS02035 PF01820 D-ala D-ala ligase N-terminus AM442_RS02035 PF07478 D-ala D-ala ligase C-terminus AM442_RS02040 PF08245 Mur ligase middle domain AM442_RS02040 PF02875 Mur ligase family, glutamate ligase domain AM442_RS02040 PF01225 Mur ligase family, catalytic domain AM442_RS02045 PF03033 Glycosyltransferase family 28 N-terminal domain AM442_RS02045 PF04101 Glycosyltransferase family 28 C-terminal domain AM442_RS02050 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AM442_RS02050 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AM442_RS02065 PF07715 TonB-dependent Receptor Plug Domain AM442_RS02065 PF00593 TonB dependent receptor AM442_RS02070 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AM442_RS02095 PF00156 Phosphoribosyl transferase domain AM442_RS02100 PF03372 Endonuclease/Exonuclease/phosphatase family AM442_RS02105 PF03960 ArsC family AM442_RS02115 PF07859 alpha/beta hydrolase fold AM442_RS02120 PF00990 Diguanylate cyclase, GGDEF domain AM442_RS02120 PF07694 5TMR of 5TMR-LYT AM442_RS02165 PF00576 HIUase/Transthyretin family AM442_RS02170 PF00860 Permease family AM442_RS02180 PF01494 FAD binding domain AM442_RS02185 PF03561 Allantoicase repeat AM442_RS02190 PF04115 Ureidoglycolate lyase AM442_RS02195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM442_RS02195 PF00204 DNA gyrase B AM442_RS02195 PF00986 DNA gyrase B subunit, carboxyl terminus AM442_RS02195 PF01751 Toprim domain AM442_RS02200 PF05728 Uncharacterised protein family (UPF0227) AM442_RS02250 PF13296 Putative type VI secretion system Rhs element Vgr AM442_RS02250 PF04717 Type VI secretion system, phage-baseplate injector AM442_RS02250 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) AM442_RS02255 PF02600 Disulfide bond formation protein DsbB AM442_RS02260 PF04262 Glutamate-cysteine ligase AM442_RS02275 PF04286 Protein of unknown function (DUF445) AM442_RS02280 PF00155 Aminotransferase class I and II AM442_RS02285 PF01554 MatE AM442_RS02290 PF00106 short chain dehydrogenase AM442_RS02300 PF00072 Response regulator receiver domain AM442_RS02300 PF00486 Transcriptional regulatory protein, C terminal AM442_RS02305 PF00512 His Kinase A (phospho-acceptor) domain AM442_RS02305 PF11808 Phosphate regulon sensor protein PhoR AM442_RS02305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM442_RS02305 PF00989 PAS fold AM442_RS02315 PF02666 Phosphatidylserine decarboxylase AM442_RS02320 PF00581 Rhodanese-like domain AM442_RS02325 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AM442_RS02325 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AM442_RS02330 PF02580 D-Tyr-tRNA(Tyr) deacylase AM442_RS02360 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AM442_RS02360 PF00925 GTP cyclohydrolase II AM442_RS02365 PF00885 6,7-dimethyl-8-ribityllumazine synthase AM442_RS02370 PF01029 NusB family AM442_RS02375 PF00586 AIR synthase related protein, N-terminal domain AM442_RS02375 PF02769 AIR synthase related protein, C-terminal domain AM442_RS02380 PF04608 Phosphatidylglycerophosphatase A AM442_RS02385 PF14602 Hexapeptide repeat of succinyl-transferase AM442_RS02385 PF00132 Bacterial transferase hexapeptide (six repeats) AM442_RS02385 PF12804 MobA-like NTP transferase domain AM442_RS02390 PF01380 SIS domain AM442_RS02395 PF01177 Asp/Glu/Hydantoin racemase AM442_RS02410 PF00491 Arginase family AM442_RS02415 PF01979 Amidohydrolase family AM442_RS02420 PF00324 Amino acid permease AM442_RS02425 PF00221 Aromatic amino acid lyase AM442_RS02430 PF01175 Urocanase Rossmann-like domain AM442_RS02430 PF17392 Urocanase C-terminal domain AM442_RS02430 PF17391 Urocanase N-terminal domain AM442_RS02440 PF05962 HutD AM442_RS02465 PF02492 CobW/HypB/UreG, nucleotide-binding domain AM442_RS02465 PF07683 Cobalamin synthesis protein cobW C-terminal domain AM442_RS02475 PF00324 Amino acid permease AM442_RS02485 PF02798 Glutathione S-transferase, N-terminal domain AM442_RS02485 PF14497 Glutathione S-transferase, C-terminal domain AM442_RS02490 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM442_RS02500 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM442_RS02505 PF04463 Protein of unknown function (DUF523) AM442_RS02510 PF01554 MatE AM442_RS02515 PF01758 Sodium Bile acid symporter family AM442_RS02520 PF00857 Isochorismatase family AM442_RS02525 PF00701 Dihydrodipicolinate synthetase family AM442_RS02535 PF01259 SAICAR synthetase AM442_RS02545 PF01226 Formate/nitrite transporter AM442_RS02550 PF00004 ATPase family associated with various cellular activities (AAA) AM442_RS02550 PF16193 AAA C-terminal domain AM442_RS02550 PF12002 MgsA AAA+ ATPase C terminal AM442_RS02555 PF07995 Glucose / Sorbosone dehydrogenase AM442_RS02560 PF03692 Putative zinc- or iron-chelating domain AM442_RS02565 PF07043 Protein of unknown function (DUF1328) AM442_RS02580 PF10576 Iron-sulfur binding domain of endonuclease III AM442_RS02580 PF00633 Helix-hairpin-helix motif AM442_RS02580 PF14815 NUDIX domain AM442_RS02580 PF00730 HhH-GPD superfamily base excision DNA repair protein AM442_RS02595 PF03352 Methyladenine glycosylase AM442_RS02600 PF08240 Alcohol dehydrogenase GroES-like domain AM442_RS02600 PF00107 Zinc-binding dehydrogenase AM442_RS02605 PF00392 Bacterial regulatory proteins, gntR family AM442_RS02605 PF00155 Aminotransferase class I and II AM442_RS02620 PF03466 LysR substrate binding domain AM442_RS02620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM442_RS02625 PF00248 Aldo/keto reductase family AM442_RS02630 PF07690 Major Facilitator Superfamily AM442_RS02640 PF01113 Dihydrodipicolinate reductase, N-terminus AM442_RS02640 PF05173 Dihydrodipicolinate reductase, C-terminus AM442_RS02650 PF00684 DnaJ central domain AM442_RS02650 PF01556 DnaJ C terminal domain AM442_RS02650 PF00226 DnaJ domain AM442_RS02660 PF00873 AcrB/AcrD/AcrF family AM442_RS02665 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM442_RS02670 PF08361 MAATS-type transcriptional repressor, C-terminal region AM442_RS02670 PF00440 Bacterial regulatory proteins, tetR family AM442_RS02680 PF00860 Permease family AM442_RS02685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM442_RS02685 PF03466 LysR substrate binding domain AM442_RS02700 PF00920 Dehydratase family AM442_RS02705 PF00551 Formyl transferase AM442_RS02705 PF02911 Formyl transferase, C-terminal domain AM442_RS02710 PF01029 NusB family AM442_RS02710 PF01189 16S rRNA methyltransferase RsmB/F AM442_RS02720 PF00209 Sodium:neurotransmitter symporter family AM442_RS02765 PF00579 tRNA synthetases class I (W and Y) AM442_RS02770 PF03702 Anhydro-N-acetylmuramic acid kinase AM442_RS02775 PF00561 alpha/beta hydrolase fold AM442_RS02780 PF01521 Iron-sulphur cluster biosynthesis AM442_RS02800 PF12848 ABC transporter AM442_RS02800 PF00005 ABC transporter AM442_RS02805 PF09335 SNARE associated Golgi protein AM442_RS02815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM442_RS02815 PF18053 DNA gyrase B subunit insert domain AM442_RS02815 PF00986 DNA gyrase B subunit, carboxyl terminus AM442_RS02815 PF00204 DNA gyrase B AM442_RS02815 PF01751 Toprim domain AM442_RS02820 PF02463 RecF/RecN/SMC N terminal domain AM442_RS02825 PF02767 DNA polymerase III beta subunit, central domain AM442_RS02825 PF00712 DNA polymerase III beta subunit, N-terminal domain AM442_RS02825 PF02768 DNA polymerase III beta subunit, C-terminal domain AM442_RS02830 PF11638 DnaA N-terminal domain AM442_RS02830 PF08299 Bacterial dnaA protein helix-turn-helix AM442_RS02830 PF00308 Bacterial dnaA protein AM442_RS02835 PF00468 Ribosomal protein L34 AM442_RS02840 PF00825 Ribonuclease P AM442_RS02845 PF01809 Putative membrane protein insertion efficiency factor AM442_RS02850 PF14849 YidC periplasmic domain AM442_RS02850 PF02096 60Kd inner membrane protein AM442_RS02855 PF10396 GTP-binding protein TrmE N-terminus AM442_RS02855 PF12631 MnmE helical domain AM442_RS02855 PF01926 50S ribosome-binding GTPase AM442_RS02860 PF02583 Metal-sensitive transcriptional repressor AM442_RS02865 PF16916 Dimerisation domain of Zinc Transporter AM442_RS02865 PF01545 Cation efflux family AM442_RS02870 PF10411 Disulfide bond isomerase protein N-terminus AM442_RS02870 PF13098 Thioredoxin-like domain AM442_RS02880 PF00156 Phosphoribosyl transferase domain AM442_RS02885 PF01979 Amidohydrolase family AM442_RS02890 PF00355 Rieske [2Fe-2S] domain AM442_RS02895 PF03738 Glutathionylspermidine synthase preATP-grasp AM442_RS02905 PF03741 Integral membrane protein TerC family AM442_RS02910 PF01569 PAP2 superfamily AM442_RS02920 PF08245 Mur ligase middle domain AM442_RS02920 PF02875 Mur ligase family, glutamate ligase domain AM442_RS02920 PF01225 Mur ligase family, catalytic domain AM442_RS02935 PF00731 AIR carboxylase AM442_RS02940 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AM442_RS02940 PF02222 ATP-grasp domain AM442_RS02945 PF13406 Transglycosylase SLT domain AM442_RS02965 PF00012 Hsp70 protein AM442_RS02970 PF01025 GrpE AM442_RS02995 PF07859 alpha/beta hydrolase fold AM442_RS03000 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AM442_RS03040 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM442_RS03045 PF01252 Signal peptidase (SPase) II AM442_RS03050 PF00133 tRNA synthetases class I (I, L, M and V) AM442_RS03050 PF08264 Anticodon-binding domain of tRNA AM442_RS03050 PF06827 Zinc finger found in FPG and IleRS AM442_RS03055 PF06574 FAD synthetase AM442_RS03055 PF01687 Riboflavin kinase AM442_RS03065 PF01048 Phosphorylase superfamily AM442_RS03070 PF08362 YcdC-like protein, C-terminal region AM442_RS03070 PF00440 Bacterial regulatory proteins, tetR family AM442_RS03075 PF00005 ABC transporter AM442_RS03080 PF00528 Binding-protein-dependent transport system inner membrane component AM442_RS03085 PF00296 Luciferase-like monooxygenase AM442_RS03090 PF09084 NMT1/THI5 like AM442_RS03095 PF09084 NMT1/THI5 like AM442_RS03100 PF00583 Acetyltransferase (GNAT) family AM442_RS03100 PF00696 Amino acid kinase family AM442_RS03115 PF00106 short chain dehydrogenase AM442_RS03120 PF13419 Haloacid dehalogenase-like hydrolase AM442_RS03130 PF01323 DSBA-like thioredoxin domain AM442_RS03135 PF13737 Transposase DDE domain AM442_RS03140 PF00440 Bacterial regulatory proteins, tetR family AM442_RS03145 PF00175 Oxidoreductase NAD-binding domain AM442_RS03150 PF00487 Fatty acid desaturase AM442_RS03155 PF03725 3' exoribonuclease family, domain 2 AM442_RS03155 PF01138 3' exoribonuclease family, domain 1 AM442_RS03165 PF05506 Domain of unknown function (DUF756) AM442_RS03165 PF04185 Phosphoesterase family AM442_RS03175 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AM442_RS03175 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AM442_RS03180 PF01510 N-acetylmuramoyl-L-alanine amidase AM442_RS03185 PF03023 Lipid II flippase MurJ AM442_RS03190 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AM442_RS03190 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM442_RS03195 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AM442_RS03195 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM442_RS03200 PF02706 Chain length determinant protein AM442_RS03200 PF13614 AAA domain AM442_RS03200 PF13807 G-rich domain on putative tyrosine kinase AM442_RS03205 PF01451 Low molecular weight phosphotyrosine protein phosphatase AM442_RS03210 PF18412 Outer-membrane lipoprotein Wza C-terminal domain AM442_RS03210 PF10531 SLBB domain AM442_RS03210 PF02563 Polysaccharide biosynthesis/export protein AM442_RS03215 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AM442_RS03215 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AM442_RS03215 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AM442_RS03220 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AM442_RS03220 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM442_RS03225 PF00132 Bacterial transferase hexapeptide (six repeats) AM442_RS03230 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AM442_RS03240 PF12464 Maltose acetyltransferase AM442_RS03240 PF14602 Hexapeptide repeat of succinyl-transferase AM442_RS03240 PF00132 Bacterial transferase hexapeptide (six repeats) AM442_RS03270 PF00534 Glycosyl transferases group 1 AM442_RS03275 PF00535 Glycosyl transferase family 2 AM442_RS03280 PF02397 Bacterial sugar transferase AM442_RS03285 PF00483 Nucleotidyl transferase AM442_RS03290 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AM442_RS03290 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AM442_RS03290 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AM442_RS03295 PF00342 Phosphoglucose isomerase AM442_RS03300 PF16363 GDP-mannose 4,6 dehydratase AM442_RS03330 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM442_RS03330 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM442_RS03330 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM442_RS03330 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM442_RS03335 PF02652 L-lactate permease AM442_RS03340 PF07729 FCD domain AM442_RS03340 PF00392 Bacterial regulatory proteins, gntR family AM442_RS03345 PF01070 FMN-dependent dehydrogenase AM442_RS03350 PF09330 D-lactate dehydrogenase, membrane binding AM442_RS03350 PF01565 FAD binding domain AM442_RS03355 PF00155 Aminotransferase class I and II AM442_RS03365 PF00392 Bacterial regulatory proteins, gntR family AM442_RS03365 PF07729 FCD domain AM442_RS03375 PF00285 Citrate synthase, C-terminal domain AM442_RS03380 PF00694 Aconitase C-terminal domain AM442_RS03380 PF00330 Aconitase family (aconitate hydratase) AM442_RS03400 PF00293 NUDIX domain AM442_RS03430 PF02801 Beta-ketoacyl synthase, C-terminal domain AM442_RS03430 PF00109 Beta-ketoacyl synthase, N-terminal domain AM442_RS03445 PF00849 RNA pseudouridylate synthase AM442_RS03460 PF00593 TonB dependent receptor AM442_RS03460 PF07715 TonB-dependent Receptor Plug Domain AM442_RS03470 PF01037 Lrp/AsnC ligand binding domain AM442_RS03475 PF01266 FAD dependent oxidoreductase AM442_RS03480 PF00842 Alanine racemase, C-terminal domain AM442_RS03480 PF01168 Alanine racemase, N-terminal domain AM442_RS03485 PF01042 Endoribonuclease L-PSP AM442_RS03490 PF00324 Amino acid permease AM442_RS03495 PF00324 Amino acid permease AM442_RS03505 PF00171 Aldehyde dehydrogenase family AM442_RS03510 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AM442_RS03510 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM442_RS03515 PF13193 AMP-binding enzyme C-terminal domain AM442_RS03515 PF00501 AMP-binding enzyme AM442_RS03520 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM442_RS03520 PF02770 Acyl-CoA dehydrogenase, middle domain AM442_RS03520 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM442_RS03525 PF00378 Enoyl-CoA hydratase/isomerase AM442_RS03530 PF00378 Enoyl-CoA hydratase/isomerase AM442_RS03535 PF00083 Sugar (and other) transporter AM442_RS03535 PF07690 Major Facilitator Superfamily AM442_RS03540 PF00765 Autoinducer synthase AM442_RS03550 PF03472 Autoinducer binding domain AM442_RS03550 PF00196 Bacterial regulatory proteins, luxR family AM442_RS03560 PF00501 AMP-binding enzyme AM442_RS03565 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM442_RS03565 PF02770 Acyl-CoA dehydrogenase, middle domain AM442_RS03565 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM442_RS03570 PF00109 Beta-ketoacyl synthase, N-terminal domain AM442_RS03570 PF16197 Ketoacyl-synthetase C-terminal extension AM442_RS03570 PF00550 Phosphopantetheine attachment site AM442_RS03570 PF02801 Beta-ketoacyl synthase, C-terminal domain AM442_RS03570 PF14765 Polyketide synthase dehydratase AM442_RS03570 PF08242 Methyltransferase domain AM442_RS03570 PF00975 Thioesterase domain AM442_RS03575 PF00501 AMP-binding enzyme AM442_RS03575 PF13193 AMP-binding enzyme C-terminal domain AM442_RS03575 PF00550 Phosphopantetheine attachment site AM442_RS03575 PF00975 Thioesterase domain AM442_RS03575 PF00668 Condensation domain AM442_RS03590 PF16363 GDP-mannose 4,6 dehydratase AM442_RS03595 PF01648 4'-phosphopantetheinyl transferase superfamily AM442_RS03610 PF01722 BolA-like protein AM442_RS03620 PF13614 AAA domain AM442_RS03635 PF09335 SNARE associated Golgi protein AM442_RS03640 PF07681 DoxX AM442_RS03645 PF04286 Protein of unknown function (DUF445) AM442_RS03650 PF02540 NAD synthase AM442_RS03650 PF00117 Glutamine amidotransferase class-I AM442_RS03650 PF00958 GMP synthase C terminal domain AM442_RS03655 PF01909 Nucleotidyltransferase domain AM442_RS03655 PF13427 Domain of unknown function (DUF4111) AM442_RS03660 PF03551 Transcriptional regulator PadR-like family AM442_RS03670 PF05726 Pirin C-terminal cupin domain AM442_RS03670 PF02678 Pirin AM442_RS03690 PF00750 tRNA synthetases class I (R) AM442_RS03690 PF05746 DALR anticodon binding domain AM442_RS03690 PF03485 Arginyl tRNA synthetase N terminal domain AM442_RS03695 PF00390 Malic enzyme, N-terminal domain AM442_RS03695 PF03949 Malic enzyme, NAD binding domain AM442_RS03700 PF04261 Dyp-type peroxidase family AM442_RS03705 PF01810 LysE type translocator AM442_RS03710 PF00950 ABC 3 transport family AM442_RS03715 PF00005 ABC transporter AM442_RS03735 PF00119 ATP synthase A chain AM442_RS03740 PF00137 ATP synthase subunit C AM442_RS03745 PF00430 ATP synthase B/B' CF(0) AM442_RS03750 PF00213 ATP synthase delta (OSCP) subunit AM442_RS03755 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM442_RS03755 PF00306 ATP synthase alpha/beta chain, C terminal domain AM442_RS03755 PF02874 ATP synthase alpha/beta family, beta-barrel domain AM442_RS03760 PF00231 ATP synthase AM442_RS03765 PF02874 ATP synthase alpha/beta family, beta-barrel domain AM442_RS03765 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM442_RS03770 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AM442_RS03780 PF00255 Glutathione peroxidase AM442_RS03790 PF07690 Major Facilitator Superfamily AM442_RS03795 PF00440 Bacterial regulatory proteins, tetR family AM442_RS03800 PF00892 EamA-like transporter family AM442_RS03805 PF01300 Telomere recombination AM442_RS03810 PF02481 DNA recombination-mediator protein A AM442_RS03810 PF17782 DprA winged helix domain AM442_RS03820 PF01327 Polypeptide deformylase AM442_RS03845 PF00440 Bacterial regulatory proteins, tetR family AM442_RS03880 PF00291 Pyridoxal-phosphate dependent enzyme AM442_RS03890 PF03358 NADPH-dependent FMN reductase AM442_RS03910 PF08497 Radical SAM N-terminal AM442_RS03910 PF04055 Radical SAM superfamily AM442_RS03910 PF11842 Domain of unknown function (DUF3362) AM442_RS03925 PF00817 impB/mucB/samB family AM442_RS03925 PF11799 impB/mucB/samB family C-terminal domain AM442_RS03925 PF11798 IMS family HHH motif AM442_RS03935 PF07690 Major Facilitator Superfamily AM442_RS03940 PF03641 Possible lysine decarboxylase AM442_RS03945 PF03471 Transporter associated domain AM442_RS03945 PF03741 Integral membrane protein TerC family AM442_RS03950 PF02810 SEC-C motif AM442_RS03955 PF03458 UPF0126 domain AM442_RS03960 PF07690 Major Facilitator Superfamily AM442_RS03965 PF00521 DNA gyrase/topoisomerase IV, subunit A AM442_RS03965 PF03989 DNA gyrase C-terminal domain, beta-propeller AM442_RS03970 PF13193 AMP-binding enzyme C-terminal domain AM442_RS03970 PF00501 AMP-binding enzyme AM442_RS03985 PF00719 Inorganic pyrophosphatase AM442_RS03990 PF03573 outer membrane porin, OprD family AM442_RS04000 PF00701 Dihydrodipicolinate synthetase family AM442_RS04010 PF00392 Bacterial regulatory proteins, gntR family AM442_RS04010 PF00155 Aminotransferase class I and II AM442_RS04015 PF13335 Magnesium chelatase, subunit ChlI C-terminal AM442_RS04015 PF01078 Magnesium chelatase, subunit ChlI AM442_RS04025 PF00665 Integrase core domain AM442_RS04060 PF04945 YHS domain AM442_RS04065 PF00672 HAMP domain AM442_RS04065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM442_RS04065 PF00512 His Kinase A (phospho-acceptor) domain AM442_RS04070 PF00072 Response regulator receiver domain AM442_RS04070 PF00486 Transcriptional regulatory protein, C terminal AM442_RS04080 PF07732 Multicopper oxidase AM442_RS04080 PF07731 Multicopper oxidase AM442_RS04080 PF00394 Multicopper oxidase AM442_RS04090 PF13411 MerR HTH family regulatory protein AM442_RS04095 PF01545 Cation efflux family AM442_RS04105 PF07664 Ferrous iron transport protein B C terminus AM442_RS04105 PF02421 Ferrous iron transport protein B AM442_RS04105 PF07670 Nucleoside recognition AM442_RS04120 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM442_RS04125 PF00873 AcrB/AcrD/AcrF family AM442_RS04150 PF00899 ThiF family AM442_RS04150 PF14461 Prokaryotic E2 family B AM442_RS04165 PF00149 Calcineurin-like phosphoesterase AM442_RS04185 PF01078 Magnesium chelatase, subunit ChlI AM442_RS04185 PF13335 Magnesium chelatase, subunit ChlI C-terminal AM442_RS04195 PF00543 Nitrogen regulatory protein P-II AM442_RS04200 PF00909 Ammonium Transporter Family AM442_RS04205 PF03477 ATP cone domain AM442_RS04210 PF01872 RibD C-terminal domain AM442_RS04210 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AM442_RS04220 PF00677 Lumazine binding domain AM442_RS04240 PF02789 Cytosol aminopeptidase family, N-terminal domain AM442_RS04240 PF00883 Cytosol aminopeptidase family, catalytic domain AM442_RS04250 PF03739 Lipopolysaccharide export system permease LptF/LptG AM442_RS04255 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AM442_RS04255 PF01676 Metalloenzyme superfamily AM442_RS04260 PF00595 PDZ domain AM442_RS04260 PF03572 Peptidase family S41 AM442_RS04265 PF00158 Sigma-54 interaction domain AM442_RS04265 PF00072 Response regulator receiver domain AM442_RS04265 PF02954 Bacterial regulatory protein, Fis family AM442_RS04270 PF00512 His Kinase A (phospho-acceptor) domain AM442_RS04270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM442_RS04275 PF00072 Response regulator receiver domain AM442_RS04275 PF00196 Bacterial regulatory proteins, luxR family AM442_RS04280 PF00768 D-alanyl-D-alanine carboxypeptidase AM442_RS04285 PF00291 Pyridoxal-phosphate dependent enzyme AM442_RS04290 PF00742 Homoserine dehydrogenase AM442_RS04290 PF03447 Homoserine dehydrogenase, NAD binding domain AM442_RS04290 PF01842 ACT domain AM442_RS04295 PF13098 Thioredoxin-like domain AM442_RS04295 PF10411 Disulfide bond isomerase protein N-terminus AM442_RS04300 PF02899 Phage integrase, N-terminal SAM-like domain AM442_RS04300 PF00589 Phage integrase family AM442_RS04310 PF07670 Nucleoside recognition AM442_RS04310 PF02421 Ferrous iron transport protein B AM442_RS04310 PF07664 Ferrous iron transport protein B C terminus AM442_RS04320 PF02875 Mur ligase family, glutamate ligase domain AM442_RS04320 PF08245 Mur ligase middle domain AM442_RS04325 PF01098 Cell cycle protein AM442_RS04330 PF00749 tRNA synthetases class I (E and Q), catalytic domain AM442_RS04335 PF01258 Prokaryotic dksA/traR C4-type zinc finger AM442_RS04340 PF00149 Calcineurin-like phosphoesterase AM442_RS04345 PF00293 NUDIX domain AM442_RS04350 PF01964 Radical SAM ThiC family AM442_RS04350 PF13667 ThiC-associated domain AM442_RS04365 PF00892 EamA-like transporter family AM442_RS04370 PF02321 Outer membrane efflux protein AM442_RS04375 PF01895 PhoU domain AM442_RS04380 PF04362 Bacterial Fe(2+) trafficking AM442_RS04385 PF00206 Lyase AM442_RS04385 PF14698 Argininosuccinate lyase C-terminal AM442_RS04390 PF06580 Histidine kinase AM442_RS04390 PF07694 5TMR of 5TMR-LYT AM442_RS04390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM442_RS04395 PF00072 Response regulator receiver domain AM442_RS04395 PF04397 LytTr DNA-binding domain AM442_RS04400 PF03900 Porphobilinogen deaminase, C-terminal domain AM442_RS04400 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AM442_RS04425 PF00816 H-NS histone family AM442_RS04440 PF00263 Bacterial type II and III secretion system protein AM442_RS04440 PF03958 Bacterial type II/III secretion system short domain AM442_RS04445 PF12401 Protein of unknown function (DUF2662) AM442_RS04445 PF00498 FHA domain AM442_RS04450 PF13419 Haloacid dehalogenase-like hydrolase AM442_RS04455 PF00425 chorismate binding enzyme AM442_RS04455 PF04715 Anthranilate synthase component I, N terminal region AM442_RS04480 PF00009 Elongation factor Tu GTP binding domain AM442_RS04480 PF03143 Elongation factor Tu C-terminal domain AM442_RS04480 PF03144 Elongation factor Tu domain 2 AM442_RS04490 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AM442_RS04495 PF02357 Transcription termination factor nusG AM442_RS04495 PF00467 KOW motif AM442_RS04500 PF03946 Ribosomal protein L11, N-terminal domain AM442_RS04500 PF00298 Ribosomal protein L11, RNA binding domain AM442_RS04505 PF00687 Ribosomal protein L1p/L10e family AM442_RS04510 PF00466 Ribosomal protein L10 AM442_RS04515 PF16320 Ribosomal protein L7/L12 dimerisation domain AM442_RS04515 PF00542 Ribosomal protein L7/L12 C-terminal domain AM442_RS04520 PF10385 RNA polymerase beta subunit external 1 domain AM442_RS04520 PF04560 RNA polymerase Rpb2, domain 7 AM442_RS04520 PF00562 RNA polymerase Rpb2, domain 6 AM442_RS04520 PF04563 RNA polymerase beta subunit AM442_RS04520 PF04561 RNA polymerase Rpb2, domain 2 AM442_RS04520 PF04565 RNA polymerase Rpb2, domain 3 AM442_RS04525 PF04998 RNA polymerase Rpb1, domain 5 AM442_RS04525 PF05000 RNA polymerase Rpb1, domain 4 AM442_RS04525 PF04997 RNA polymerase Rpb1, domain 1 AM442_RS04525 PF04983 RNA polymerase Rpb1, domain 3 AM442_RS04525 PF00623 RNA polymerase Rpb1, domain 2 AM442_RS04545 PF00561 alpha/beta hydrolase fold AM442_RS04550 PF03553 Na+/H+ antiporter family AM442_RS04550 PF13726 Na+-H+ antiporter family AM442_RS04565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM442_RS04565 PF00183 Hsp90 protein AM442_RS04580 PF01323 DSBA-like thioredoxin domain AM442_RS04590 PF00376 MerR family regulatory protein AM442_RS04590 PF09278 MerR, DNA binding AM442_RS04605 PF00108 Thiolase, N-terminal domain AM442_RS04605 PF02803 Thiolase, C-terminal domain AM442_RS04610 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM442_RS04610 PF00378 Enoyl-CoA hydratase/isomerase AM442_RS04610 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM442_RS04640 PF01541 GIY-YIG catalytic domain AM442_RS04640 PF02151 UvrB/uvrC motif AM442_RS04640 PF08459 UvrC Helix-hairpin-helix N-terminal AM442_RS04650 PF01066 CDP-alcohol phosphatidyltransferase AM442_RS04655 PF02805 Metal binding domain of Ada AM442_RS04655 PF12833 Helix-turn-helix domain AM442_RS04655 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AM442_RS04655 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AM442_RS04680 PF13533 Biotin-lipoyl like AM442_RS04685 PF03652 Holliday junction resolvase AM442_RS04690 PF02622 Uncharacterized ACR, COG1678 AM442_RS04695 PF02463 RecF/RecN/SMC N terminal domain AM442_RS04705 PF06865 Pyrimidine/purine nucleoside phosphorylase AM442_RS04710 PF08032 RNA 2'-O ribose methyltransferase substrate binding AM442_RS04710 PF00588 SpoU rRNA Methylase family AM442_RS04720 PF01121 Dephospho-CoA kinase AM442_RS04725 PF01478 Type IV leader peptidase family AM442_RS04725 PF06750 Bacterial Peptidase A24 N-terminal domain AM442_RS04730 PF00482 Type II secretion system (T2SS), protein F AM442_RS04735 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AM442_RS04735 PF00437 Type II/IV secretion system protein AM442_RS04740 PF00121 Triosephosphate isomerase AM442_RS04745 PF03840 Preprotein translocase SecG subunit AM442_RS04765 PF17384 RimP C-terminal SH3 domain AM442_RS04765 PF02576 RimP N-terminal domain AM442_RS04770 PF08529 NusA N-terminal domain AM442_RS04770 PF13184 NusA-like KH domain AM442_RS04770 PF00575 S1 RNA binding domain AM442_RS04775 PF00009 Elongation factor Tu GTP binding domain AM442_RS04775 PF08364 Bacterial translation initiation factor IF-2 associated region AM442_RS04775 PF04760 Translation initiation factor IF-2, N-terminal region AM442_RS04775 PF11987 Translation-initiation factor 2 AM442_RS04780 PF02033 Ribosome-binding factor A AM442_RS04785 PF03334 Na+/H+ antiporter subunit AM442_RS04790 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) AM442_RS04795 PF01899 Na+/H+ ion antiporter subunit AM442_RS04800 PF00361 Proton-conducting membrane transporter AM442_RS04805 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AM442_RS04810 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AM442_RS04810 PF00361 Proton-conducting membrane transporter AM442_RS04810 PF13244 Domain of unknown function (DUF4040) AM442_RS04810 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AM442_RS04825 PF01502 Phosphoribosyl-AMP cyclohydrolase AM442_RS04830 PF01494 FAD binding domain AM442_RS04835 PF03109 ABC1 family AM442_RS04845 PF01209 ubiE/COQ5 methyltransferase family AM442_RS04855 PF03976 Polyphosphate kinase 2 (PPK2) AM442_RS04865 PF17946 RecC C-terminal domain AM442_RS04870 PF13361 UvrD-like helicase C-terminal domain AM442_RS04870 PF12705 PD-(D/E)XK nuclease superfamily AM442_RS04870 PF00580 UvrD/REP helicase N-terminal domain AM442_RS04875 PF13538 UvrD-like helicase C-terminal domain AM442_RS04880 PF00144 Beta-lactamase AM442_RS04885 PF00312 Ribosomal protein S15 AM442_RS04890 PF03725 3' exoribonuclease family, domain 2 AM442_RS04890 PF00013 KH domain AM442_RS04890 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AM442_RS04890 PF01138 3' exoribonuclease family, domain 1 AM442_RS04890 PF00575 S1 RNA binding domain AM442_RS04895 PF01544 CorA-like Mg2+ transporter protein AM442_RS04905 PF01556 DnaJ C terminal domain AM442_RS04905 PF00226 DnaJ domain AM442_RS04915 PF01430 Hsp33 protein AM442_RS04920 PF00999 Sodium/hydrogen exchanger family AM442_RS04920 PF02254 TrkA-N domain AM442_RS04925 PF17764 3′ DNA-binding domain (3′BD) AM442_RS04925 PF00270 DEAD/DEAH box helicase AM442_RS04925 PF00271 Helicase conserved C-terminal domain AM442_RS04925 PF18074 Primosomal protein N C-terminal domain AM442_RS04925 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AM442_RS04930 PF00482 Type II secretion system (T2SS), protein F AM442_RS04935 PF08334 Type II secretion system (T2SS), protein G AM442_RS04935 PF07963 Prokaryotic N-terminal methylation motif AM442_RS04950 PF01588 Putative tRNA binding domain AM442_RS04955 PF00795 Carbon-nitrogen hydrolase AM442_RS04960 PF00571 CBS domain AM442_RS04960 PF03471 Transporter associated domain AM442_RS04965 PF01206 Sulfurtransferase TusA AM442_RS04980 PF01177 Asp/Glu/Hydantoin racemase AM442_RS04990 PF00762 Ferrochelatase AM442_RS04995 PF00753 Metallo-beta-lactamase superfamily AM442_RS05000 PF03884 DNA gyrase inhibitor YacG AM442_RS05010 PF13247 4Fe-4S dicluster domain AM442_RS05010 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM442_RS05010 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AM442_RS05020 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AM442_RS05035 PF01197 Ribosomal protein L31 AM442_RS05040 PF03109 ABC1 family AM442_RS05045 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AM442_RS05045 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM442_RS05050 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AM442_RS05050 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM442_RS05050 PF02770 Acyl-CoA dehydrogenase, middle domain AM442_RS05055 PF01554 MatE AM442_RS05065 PF04055 Radical SAM superfamily AM442_RS05065 PF06969 HemN C-terminal domain AM442_RS05075 PF03466 LysR substrate binding domain AM442_RS05075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM442_RS05090 PF13193 AMP-binding enzyme C-terminal domain AM442_RS05090 PF00501 AMP-binding enzyme AM442_RS05095 PF12111 Polyribonucleotide phosphorylase C terminal AM442_RS05095 PF10150 Ribonuclease E/G family AM442_RS05095 PF00575 S1 RNA binding domain AM442_RS05105 PF01479 S4 domain AM442_RS05105 PF00849 RNA pseudouridylate synthase AM442_RS05110 PF13419 Haloacid dehalogenase-like hydrolase AM442_RS05115 PF13280 WYL domain AM442_RS05115 PF08279 HTH domain AM442_RS05120 PF02798 Glutathione S-transferase, N-terminal domain AM442_RS05130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM442_RS05130 PF03466 LysR substrate binding domain AM442_RS05135 PF12706 Beta-lactamase superfamily domain AM442_RS05140 PF00141 Peroxidase AM442_RS05145 PF00391 PEP-utilising enzyme, mobile domain AM442_RS05145 PF05524 PEP-utilising enzyme, N-terminal AM442_RS05145 PF01590 GAF domain AM442_RS05145 PF02896 PEP-utilising enzyme, TIM barrel domain AM442_RS05150 PF00293 NUDIX domain AM442_RS05170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM442_RS05170 PF03466 LysR substrate binding domain AM442_RS05180 PF00330 Aconitase family (aconitate hydratase) AM442_RS05185 PF00694 Aconitase C-terminal domain AM442_RS05195 PF00180 Isocitrate/isopropylmalate dehydrogenase AM442_RS05210 PF01176 Translation initiation factor 1A / IF-1 AM442_RS05220 PF01416 tRNA pseudouridine synthase AM442_RS05240 PF02774 Semialdehyde dehydrogenase, dimerisation domain AM442_RS05240 PF01118 Semialdehyde dehydrogenase, NAD binding domain AM442_RS05250 PF00375 Sodium:dicarboxylate symporter family AM442_RS05260 PF03279 Bacterial lipid A biosynthesis acyltransferase AM442_RS05265 PF01810 LysE type translocator AM442_RS05270 PF12848 ABC transporter AM442_RS05270 PF16326 ABC transporter C-terminal domain AM442_RS05270 PF00005 ABC transporter AM442_RS05275 PF04102 SlyX AM442_RS05280 PF08240 Alcohol dehydrogenase GroES-like domain AM442_RS05280 PF00107 Zinc-binding dehydrogenase AM442_RS05285 PF01638 HxlR-like helix-turn-helix AM442_RS05295 PF08272 Topoisomerase I zinc-ribbon-like AM442_RS05295 PF01131 DNA topoisomerase AM442_RS05295 PF01751 Toprim domain AM442_RS05295 PF01396 Topoisomerase DNA binding C4 zinc finger AM442_RS05310 PF00580 UvrD/REP helicase N-terminal domain AM442_RS05310 PF13361 UvrD-like helicase C-terminal domain AM442_RS05315 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) AM442_RS05335 PF00999 Sodium/hydrogen exchanger family AM442_RS05335 PF02254 TrkA-N domain AM442_RS05340 PF00471 Ribosomal protein L33 AM442_RS05345 PF00830 Ribosomal L28 family AM442_RS05350 PF00171 Aldehyde dehydrogenase family AM442_RS05360 PF00551 Formyl transferase AM442_RS05360 PF01842 ACT domain AM442_RS05370 PF01618 MotA/TolQ/ExbB proton channel family AM442_RS05380 PF01625 Peptide methionine sulfoxide reductase AM442_RS05390 PF00186 Dihydrofolate reductase AM442_RS05395 PF00303 Thymidylate synthase AM442_RS05410 PF01790 Prolipoprotein diacylglyceryl transferase AM442_RS05430 PF00902 Sec-independent protein translocase protein (TatC) AM442_RS05435 PF02416 mttA/Hcf106 family AM442_RS05440 PF02416 mttA/Hcf106 family AM442_RS05450 PF01725 Ham1 family AM442_RS05460 PF07021 Methionine biosynthesis protein MetW AM442_RS05460 PF00561 alpha/beta hydrolase fold AM442_RS05465 PF00561 alpha/beta hydrolase fold AM442_RS05470 PF00682 HMGL-like AM442_RS05470 PF08502 LeuA allosteric (dimerisation) domain AM442_RS05475 PF13640 2OG-Fe(II) oxygenase superfamily AM442_RS05475 PF18331 PKHD-type hydroxylase C-terminal domain AM442_RS05480 PF07715 TonB-dependent Receptor Plug Domain AM442_RS05480 PF00593 TonB dependent receptor AM442_RS05485 PF05698 Bacterial trigger factor protein (TF) C-terminus AM442_RS05485 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM442_RS05485 PF05697 Bacterial trigger factor protein (TF) AM442_RS05490 PF00574 Clp protease AM442_RS05495 PF07724 AAA domain (Cdc48 subfamily) AM442_RS05495 PF06689 ClpX C4-type zinc finger AM442_RS05495 PF10431 C-terminal, D2-small domain, of ClpB protein AM442_RS05510 PF05681 Fumarate hydratase (Fumerase) AM442_RS05510 PF05683 Fumarase C-terminus AM442_RS05515 PF01515 Phosphate acetyl/butaryl transferase AM442_RS05515 PF07085 DRTGG domain AM442_RS05520 PF00871 Acetokinase family AM442_RS05530 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) AM442_RS05530 PF06594 Haemolysin-type calcium binding protein related domain AM442_RS05545 PF17074 Darcynin, domain of unknown function AM442_RS05580 PF02567 Phenazine biosynthesis-like protein AM442_RS05600 PF00920 Dehydratase family AM442_RS05605 PF01081 KDPG and KHG aldolase AM442_RS05610 PF02447 GntP family permease AM442_RS05615 PF01202 Shikimate kinase AM442_RS05620 PF00171 Aldehyde dehydrogenase family AM442_RS05625 PF00171 Aldehyde dehydrogenase family AM442_RS05630 PF00561 alpha/beta hydrolase fold AM442_RS05640 PF00933 Glycosyl hydrolase family 3 N terminal domain AM442_RS05645 PF11818 C-terminal domain of tail specific protease (DUF3340) AM442_RS05645 PF03572 Peptidase family S41 AM442_RS05645 PF00595 PDZ domain AM442_RS05645 PF17804 Tail specific protease N-terminal domain AM442_RS05650 PF00534 Glycosyl transferases group 1 AM442_RS05650 PF13439 Glycosyltransferase Family 4 AM442_RS05655 PF01569 PAP2 superfamily AM442_RS05660 PF04384 Iron-sulphur cluster assembly AM442_RS05665 PF00334 Nucleoside diphosphate kinase AM442_RS05670 PF04055 Radical SAM superfamily AM442_RS05680 PF13464 Domain of unknown function (DUF4115) AM442_RS05685 PF04551 GcpE protein AM442_RS05690 PF03129 Anticodon binding domain AM442_RS05690 PF13393 Histidyl-tRNA synthetase AM442_RS05700 PF13360 PQQ-like domain AM442_RS05705 PF01926 50S ribosome-binding GTPase AM442_RS05705 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AM442_RS05715 PF02556 Preprotein translocase subunit SecB AM442_RS05720 PF00462 Glutaredoxin AM442_RS05730 PF03193 RsgA GTPase AM442_RS05735 PF00929 Exonuclease AM442_RS05750 PF02321 Outer membrane efflux protein AM442_RS05755 PF12704 MacB-like periplasmic core domain AM442_RS05755 PF02687 FtsX-like permease family AM442_RS05755 PF00005 ABC transporter AM442_RS05760 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM442_RS05775 PF13603 Leucyl-tRNA synthetase, Domain 2 AM442_RS05775 PF00133 tRNA synthetases class I (I, L, M and V) AM442_RS05775 PF08264 Anticodon-binding domain of tRNA AM442_RS05775 PF09334 tRNA synthetases class I (M) AM442_RS05790 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM442_RS05790 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM442_RS05790 PF00205 Thiamine pyrophosphate enzyme, central domain AM442_RS05795 PF10369 Small subunit of acetolactate synthase AM442_RS05800 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AM442_RS05800 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AM442_RS05805 PF00990 Diguanylate cyclase, GGDEF domain AM442_RS05805 PF03707 Bacterial signalling protein N terminal repeat AM442_RS05805 PF00563 EAL domain AM442_RS05835 PF16658 Class II release factor RF3, C-terminal domain AM442_RS05835 PF03144 Elongation factor Tu domain 2 AM442_RS05835 PF00009 Elongation factor Tu GTP binding domain AM442_RS05850 PF01026 TatD related DNase AM442_RS05855 PF00694 Aconitase C-terminal domain AM442_RS05855 PF00330 Aconitase family (aconitate hydratase) AM442_RS05865 PF00899 ThiF family AM442_RS05875 PF03466 LysR substrate binding domain AM442_RS05875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM442_RS05885 PF01207 Dihydrouridine synthase (Dus) AM442_RS05890 PF07690 Major Facilitator Superfamily AM442_RS05900 PF00892 EamA-like transporter family AM442_RS05905 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AM442_RS05905 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AM442_RS05910 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AM442_RS05915 PF02233 NAD(P) transhydrogenase beta subunit AM442_RS05920 PF00106 short chain dehydrogenase AM442_RS05930 PF01261 Xylose isomerase-like TIM barrel AM442_RS05935 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM442_RS05935 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AM442_RS05940 PF00378 Enoyl-CoA hydratase/isomerase AM442_RS05945 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AM442_RS05945 PF00072 Response regulator receiver domain AM442_RS05945 PF01627 Hpt domain AM442_RS05945 PF00512 His Kinase A (phospho-acceptor) domain AM442_RS05945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM442_RS05945 PF00672 HAMP domain AM442_RS05950 PF00291 Pyridoxal-phosphate dependent enzyme AM442_RS05960 PF05958 tRNA (Uracil-5-)-methyltransferase AM442_RS05965 PF13291 ACT domain AM442_RS05965 PF04607 Region found in RelA / SpoT proteins AM442_RS05965 PF02824 TGS domain AM442_RS05975 PF03819 MazG nucleotide pyrophosphohydrolase domain AM442_RS05985 PF01743 Poly A polymerase head domain AM442_RS05985 PF12626 Polymerase A arginine-rich C-terminus AM442_RS05985 PF12627 Probable RNA and SrmB- binding site of polymerase A AM442_RS05990 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AM442_RS05995 PF02548 Ketopantoate hydroxymethyltransferase AM442_RS06000 PF02569 Pantoate-beta-alanine ligase AM442_RS06005 PF03668 P-loop ATPase protein family AM442_RS06010 PF00381 PTS HPr component phosphorylation site AM442_RS06015 PF04751 Protein of unknown function (DUF615) AM442_RS06020 PF13193 AMP-binding enzyme C-terminal domain AM442_RS06020 PF00501 AMP-binding enzyme AM442_RS06025 PF03129 Anticodon binding domain AM442_RS06025 PF02824 TGS domain AM442_RS06025 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM442_RS06025 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AM442_RS06030 PF05198 Translation initiation factor IF-3, N-terminal domain AM442_RS06030 PF00707 Translation initiation factor IF-3, C-terminal domain AM442_RS06040 PF00043 Glutathione S-transferase, C-terminal domain AM442_RS06040 PF02798 Glutathione S-transferase, N-terminal domain AM442_RS06045 PF09335 SNARE associated Golgi protein AM442_RS06050 PF07690 Major Facilitator Superfamily AM442_RS06055 PF01632 Ribosomal protein L35 AM442_RS06060 PF00453 Ribosomal protein L20 AM442_RS06075 PF01409 tRNA synthetases class II core domain (F) AM442_RS06075 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AM442_RS06080 PF03484 tRNA synthetase B5 domain AM442_RS06080 PF03147 Ferredoxin-fold anticodon binding domain AM442_RS06080 PF01588 Putative tRNA binding domain AM442_RS06080 PF03483 B3/4 domain AM442_RS06080 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AM442_RS06085 PF00216 Bacterial DNA-binding protein AM442_RS06100 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM442_RS06100 PF07498 Rho termination factor, N-terminal domain AM442_RS06100 PF07497 Rho termination factor, RNA-binding domain AM442_RS06105 PF00085 Thioredoxin AM442_RS06110 PF02541 Ppx/GppA phosphatase family AM442_RS06115 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AM442_RS06120 PF11734 TilS substrate C-terminal domain AM442_RS06120 PF01171 PP-loop family AM442_RS06120 PF09179 TilS substrate binding domain AM442_RS06125 PF03807 NADP oxidoreductase coenzyme F420-dependent AM442_RS06125 PF14748 Pyrroline-5-carboxylate reductase dimerisation AM442_RS06130 PF02325 YGGT family AM442_RS06135 PF01612 3'-5' exonuclease AM442_RS06135 PF00476 DNA polymerase family A AM442_RS06135 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AM442_RS06135 PF01367 5'-3' exonuclease, C-terminal SAM fold AM442_RS06155 PF00437 Type II/IV secretion system protein AM442_RS06160 PF02566 OsmC-like protein AM442_RS06165 PF01047 MarR family AM442_RS06175 PF00795 Carbon-nitrogen hydrolase AM442_RS06220 PF04552 Sigma-54, DNA binding domain AM442_RS06220 PF04963 Sigma-54 factor, core binding domain AM442_RS06220 PF00309 Sigma-54 factor, Activator interacting domain (AID) AM442_RS06225 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AM442_RS06230 PF01722 BolA-like protein AM442_RS06235 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AM442_RS06240 PF01634 ATP phosphoribosyltransferase AM442_RS06245 PF00815 Histidinol dehydrogenase AM442_RS06250 PF00155 Aminotransferase class I and II AM442_RS06255 PF00425 chorismate binding enzyme AM442_RS06255 PF04715 Anthranilate synthase component I, N terminal region AM442_RS06295 PF00293 NUDIX domain AM442_RS06300 PF00132 Bacterial transferase hexapeptide (six repeats) AM442_RS06305 PF00814 Glycoprotease family AM442_RS06310 PF04445 Putative SAM-dependent methyltransferase AM442_RS06320 PF00756 Putative esterase AM442_RS06330 PF00834 Ribulose-phosphate 3 epimerase family AM442_RS06345 PF07732 Multicopper oxidase AM442_RS06345 PF07731 Multicopper oxidase AM442_RS06345 PF00394 Multicopper oxidase AM442_RS06360 PF00893 Small Multidrug Resistance protein AM442_RS06365 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AM442_RS06365 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AM442_RS06370 PF01960 ArgJ family AM442_RS06375 PF02445 Quinolinate synthetase A protein AM442_RS06400 PF00962 Adenosine/AMP deaminase AM442_RS06405 PF08240 Alcohol dehydrogenase GroES-like domain AM442_RS06405 PF00107 Zinc-binding dehydrogenase AM442_RS06410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM442_RS06410 PF03466 LysR substrate binding domain AM442_RS06415 PF02770 Acyl-CoA dehydrogenase, middle domain AM442_RS06415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM442_RS06415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM442_RS06420 PF07690 Major Facilitator Superfamily AM442_RS06425 PF02515 CoA-transferase family III AM442_RS06435 PF14537 Cytochrome c3 AM442_RS06435 PF00890 FAD binding domain AM442_RS06440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM442_RS06440 PF03466 LysR substrate binding domain AM442_RS06450 PF07690 Major Facilitator Superfamily AM442_RS06460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM442_RS06460 PF03466 LysR substrate binding domain AM442_RS06485 PF08267 Cobalamin-independent synthase, N-terminal domain AM442_RS06485 PF01717 Cobalamin-independent synthase, Catalytic domain AM442_RS06490 PF01613 Flavin reductase like domain AM442_RS06510 PF17074 Darcynin, domain of unknown function AM442_RS06525 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) AM442_RS06525 PF06594 Haemolysin-type calcium binding protein related domain AM442_RS06540 PF17074 Darcynin, domain of unknown function AM442_RS06590 PF02567 Phenazine biosynthesis-like protein AM442_RS06605 PF00268 Ribonucleotide reductase, small chain AM442_RS06615 PF03477 ATP cone domain AM442_RS06615 PF00317 Ribonucleotide reductase, all-alpha domain AM442_RS06615 PF02867 Ribonucleotide reductase, barrel domain AM442_RS06625 PF00486 Transcriptional regulatory protein, C terminal AM442_RS06625 PF00072 Response regulator receiver domain AM442_RS06630 PF00512 His Kinase A (phospho-acceptor) domain AM442_RS06630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM442_RS06630 PF00672 HAMP domain AM442_RS06640 PF00990 Diguanylate cyclase, GGDEF domain AM442_RS06640 PF17151 Periplasmic sensor domain AM442_RS06645 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AM442_RS06650 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AM442_RS06655 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AM442_RS06655 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AM442_RS06665 PF10531 SLBB domain AM442_RS06665 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AM442_RS06665 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AM442_RS06670 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM442_RS06670 PF00384 Molybdopterin oxidoreductase AM442_RS06670 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AM442_RS06675 PF00146 NADH dehydrogenase AM442_RS06680 PF12838 4Fe-4S dicluster domain AM442_RS06685 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AM442_RS06690 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AM442_RS06695 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AM442_RS06695 PF00361 Proton-conducting membrane transporter AM442_RS06700 PF00361 Proton-conducting membrane transporter AM442_RS06705 PF00361 Proton-conducting membrane transporter AM442_RS06715 PF00313 'Cold-shock' DNA-binding domain AM442_RS06720 PF03466 LysR substrate binding domain AM442_RS06720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM442_RS06725 PF00970 Oxidoreductase FAD-binding domain AM442_RS06725 PF00175 Oxidoreductase NAD-binding domain AM442_RS06740 PF05552 Conserved TM helix AM442_RS06755 PF00291 Pyridoxal-phosphate dependent enzyme AM442_RS06760 PF13533 Biotin-lipoyl like AM442_RS06785 PF09334 tRNA synthetases class I (M) AM442_RS06785 PF01588 Putative tRNA binding domain AM442_RS06795 PF10609 NUBPL iron-transfer P-loop NTPase AM442_RS06805 PF01048 Phosphorylase superfamily AM442_RS06820 PF00692 dUTPase AM442_RS06865 PF01207 Dihydrouridine synthase (Dus) AM442_RS06875 PF02881 SRP54-type protein, helical bundle domain AM442_RS06875 PF02978 Signal peptide binding domain AM442_RS06875 PF00448 SRP54-type protein, GTPase domain AM442_RS06880 PF03309 Type III pantothenate kinase AM442_RS06890 PF01925 Sulfite exporter TauE/SafE AM442_RS06900 PF02463 RecF/RecN/SMC N terminal domain AM442_RS06900 PF06470 SMC proteins Flexible Hinge Domain AM442_RS06910 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AM442_RS06910 PF12826 Helix-hairpin-helix motif AM442_RS06910 PF01653 NAD-dependent DNA ligase adenylation domain AM442_RS06910 PF00533 BRCA1 C Terminus (BRCT) domain AM442_RS06910 PF03120 NAD-dependent DNA ligase OB-fold domain AM442_RS06915 PF00210 Ferritin-like domain AM442_RS06920 PF07690 Major Facilitator Superfamily AM442_RS06925 PF00982 Glycosyltransferase family 20 AM442_RS06930 PF02358 Trehalose-phosphatase AM442_RS06935 PF12697 Alpha/beta hydrolase family AM442_RS06935 PF08241 Methyltransferase domain AM442_RS06940 PF04055 Radical SAM superfamily AM442_RS06940 PF00202 Aminotransferase class-III AM442_RS06940 PF06968 Biotin and Thiamin Synthesis associated domain AM442_RS06945 PF00155 Aminotransferase class I and II AM442_RS06960 PF01479 S4 domain AM442_RS06960 PF00849 RNA pseudouridylate synthase AM442_RS06965 PF04079 Segregation and condensation complex subunit ScpB AM442_RS06970 PF02616 Segregation and condensation protein ScpA AM442_RS06975 PF01300 Telomere recombination AM442_RS06980 PF04315 Elongation factor P hydroxylase AM442_RS06985 PF02620 Large ribosomal RNA subunit accumulation protein YceD AM442_RS06990 PF01783 Ribosomal L32p protein family AM442_RS06995 PF00698 Acyl transferase domain AM442_RS07005 PF00550 Phosphopantetheine attachment site AM442_RS07010 PF04972 BON domain AM442_RS07010 PF01476 LysM domain AM442_RS07015 PF03070 TENA/THI-4/PQQC family AM442_RS07015 PF02581 Thiamine monophosphate synthase AM442_RS07015 PF08543 Phosphomethylpyrimidine kinase AM442_RS07025 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AM442_RS07040 PF02261 Aspartate decarboxylase AM442_RS07045 PF01195 Peptidyl-tRNA hydrolase AM442_RS07050 PF01386 Ribosomal L25p family AM442_RS07055 PF14572 Phosphoribosyl synthetase-associated domain AM442_RS07055 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AM442_RS07075 PF08544 GHMP kinases C terminal AM442_RS07075 PF00288 GHMP kinases N terminal domain AM442_RS07080 PF03550 Outer membrane lipoprotein LolB AM442_RS07090 PF01488 Shikimate / quinate 5-dehydrogenase AM442_RS07090 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AM442_RS07090 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AM442_RS07095 PF10410 DnaB-helicase binding domain of primase AM442_RS07095 PF08278 DNA primase DnaG DnaB-binding AM442_RS07095 PF08275 DNA primase catalytic core, N-terminal domain AM442_RS07095 PF01807 CHC2 zinc finger AM442_RS07100 PF13525 Outer membrane lipoprotein AM442_RS07105 PF01479 S4 domain AM442_RS07105 PF00849 RNA pseudouridylate synthase AM442_RS07110 PF02578 Multi-copper polyphenol oxidoreductase laccase AM442_RS07115 PF03358 NADPH-dependent FMN reductase AM442_RS07120 PF01668 SmpB protein AM442_RS07195 PF03796 DnaB-like helicase C terminal domain AM442_RS07195 PF00772 DnaB-like helicase N terminal domain AM442_RS07460 PF13356 Arm DNA-binding domain AM442_RS07460 PF00589 Phage integrase family AM442_RS07465 PF01467 Cytidylyltransferase-like AM442_RS07470 PF00037 4Fe-4S binding domain AM442_RS07490 PF03466 LysR substrate binding domain AM442_RS07490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM442_RS07495 PF00180 Isocitrate/isopropylmalate dehydrogenase AM442_RS07500 PF02028 BCCT, betaine/carnitine/choline family transporter AM442_RS07505 PF07859 alpha/beta hydrolase fold AM442_RS07510 PF00355 Rieske [2Fe-2S] domain AM442_RS07510 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AM442_RS07515 PF00171 Aldehyde dehydrogenase family AM442_RS07520 PF00970 Oxidoreductase FAD-binding domain AM442_RS07520 PF00175 Oxidoreductase NAD-binding domain AM442_RS07520 PF00111 2Fe-2S iron-sulfur cluster binding domain AM442_RS07535 PF02540 NAD synthase AM442_RS07535 PF00795 Carbon-nitrogen hydrolase AM442_RS07545 PF05726 Pirin C-terminal cupin domain AM442_RS07545 PF02678 Pirin AM442_RS07550 PF03653 Uncharacterised protein family (UPF0093) AM442_RS07555 PF02801 Beta-ketoacyl synthase, C-terminal domain AM442_RS07555 PF00109 Beta-ketoacyl synthase, N-terminal domain AM442_RS07565 PF00164 Ribosomal protein S12/S23 AM442_RS07570 PF00177 Ribosomal protein S7p/S5e AM442_RS07575 PF00009 Elongation factor Tu GTP binding domain AM442_RS07575 PF03144 Elongation factor Tu domain 2 AM442_RS07575 PF00679 Elongation factor G C-terminus AM442_RS07575 PF03764 Elongation factor G, domain IV AM442_RS07575 PF14492 Elongation Factor G, domain II AM442_RS07580 PF03143 Elongation factor Tu C-terminal domain AM442_RS07580 PF03144 Elongation factor Tu domain 2 AM442_RS07580 PF00009 Elongation factor Tu GTP binding domain AM442_RS07595 PF00583 Acetyltransferase (GNAT) family AM442_RS07600 PF04376 Arginine-tRNA-protein transferase, N terminus AM442_RS07600 PF04377 Arginine-tRNA-protein transferase, C terminus AM442_RS07605 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AM442_RS07610 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM442_RS07615 PF17854 FtsK alpha domain AM442_RS07615 PF01580 FtsK/SpoIIIE family AM442_RS07615 PF09397 Ftsk gamma domain AM442_RS07615 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AM442_RS07620 PF01810 LysE type translocator AM442_RS07630 PF03776 Septum formation topological specificity factor MinE AM442_RS07635 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AM442_RS07640 PF03775 Septum formation inhibitor MinC, C-terminal domain AM442_RS07650 PF01553 Acyltransferase AM442_RS07655 PF13488 Glycine zipper AM442_RS07655 PF00691 OmpA family AM442_RS07660 PF13361 UvrD-like helicase C-terminal domain AM442_RS07660 PF00580 UvrD/REP helicase N-terminal domain AM442_RS07665 PF00692 dUTPase AM442_RS07670 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM442_RS07670 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM442_RS07670 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM442_RS07670 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM442_RS07675 PF00696 Amino acid kinase family AM442_RS07685 PF13230 Glutamine amidotransferases class-II AM442_RS07690 PF01814 Hemerythrin HHE cation binding domain AM442_RS07705 PF03658 RnfH family Ubiquitin AM442_RS07710 PF04355 SmpA / OmlA family AM442_RS07715 PF01475 Ferric uptake regulator family AM442_RS07720 PF00437 Type II/IV secretion system protein AM442_RS07725 PF00437 Type II/IV secretion system protein AM442_RS07730 PF01168 Alanine racemase, N-terminal domain AM442_RS07740 PF12320 Type 5 capsule protein repressor C-terminal domain AM442_RS07740 PF00149 Calcineurin-like phosphoesterase AM442_RS07760 PF08338 Domain of unknown function (DUF1731) AM442_RS07760 PF01370 NAD dependent epimerase/dehydratase family AM442_RS07765 PF01266 FAD dependent oxidoreductase AM442_RS07770 PF00490 Delta-aminolevulinic acid dehydratase AM442_RS07775 PF03061 Thioesterase superfamily AM442_RS07780 PF13533 Biotin-lipoyl like AM442_RS07785 PF07690 Major Facilitator Superfamily AM442_RS07800 PF01867 CRISPR associated protein Cas1 AM442_RS07810 PF09615 CRISPR-associated protein (Cas_Csy3) AM442_RS07825 PF18019 HD domain AM442_RS07845 PF00083 Sugar (and other) transporter AM442_RS07850 PF00701 Dihydrodipicolinate synthetase family AM442_RS07860 PF04542 Sigma-70 region 2 AM442_RS07860 PF08281 Sigma-70, region 4 AM442_RS07870 PF07715 TonB-dependent Receptor Plug Domain AM442_RS07870 PF00593 TonB dependent receptor AM442_RS07880 PF04575 Protein of unknown function (DUF560) AM442_RS07890 PF01126 Heme oxygenase AM442_RS07915 PF13520 Amino acid permease AM442_RS07935 PF06039 Malate:quinone oxidoreductase (Mqo) AM442_RS07940 PF05199 GMC oxidoreductase AM442_RS07940 PF00732 GMC oxidoreductase AM442_RS07945 PF00171 Aldehyde dehydrogenase family AM442_RS07950 PF13977 BetI-type transcriptional repressor, C-terminal AM442_RS07950 PF00440 Bacterial regulatory proteins, tetR family AM442_RS07955 PF02028 BCCT, betaine/carnitine/choline family transporter AM442_RS07960 PF02028 BCCT, betaine/carnitine/choline family transporter AM442_RS07970 PF03061 Thioesterase superfamily AM442_RS07980 PF02492 CobW/HypB/UreG, nucleotide-binding domain AM442_RS07980 PF07683 Cobalamin synthesis protein cobW C-terminal domain AM442_RS07985 PF00375 Sodium:dicarboxylate symporter family AM442_RS07990 PF07152 YaeQ protein AM442_RS07995 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM442_RS08000 PF01522 Polysaccharide deacetylase AM442_RS08000 PF14883 Hypothetical glycosyl hydrolase family 13 AM442_RS08005 PF00535 Glycosyl transferase family 2 AM442_RS08015 PF00378 Enoyl-CoA hydratase/isomerase AM442_RS08030 PF09339 IclR helix-turn-helix domain AM442_RS08030 PF01614 Bacterial transcriptional regulator AM442_RS08035 PF00355 Rieske [2Fe-2S] domain AM442_RS08045 PF00355 Rieske [2Fe-2S] domain AM442_RS08055 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM442_RS08060 PF14759 Reductase C-terminal AM442_RS08060 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM442_RS08065 PF07690 Major Facilitator Superfamily AM442_RS08075 PF12697 Alpha/beta hydrolase family AM442_RS08085 PF03447 Homoserine dehydrogenase, NAD binding domain AM442_RS08085 PF01958 Domain of unknown function DUF108 AM442_RS08090 PF00171 Aldehyde dehydrogenase family AM442_RS08095 PF00205 Thiamine pyrophosphate enzyme, central domain AM442_RS08095 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM442_RS08095 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM442_RS08105 PF07690 Major Facilitator Superfamily AM442_RS08110 PF01327 Polypeptide deformylase AM442_RS08115 PF04960 Glutaminase AM442_RS08120 PF02311 AraC-like ligand binding domain AM442_RS08120 PF12833 Helix-turn-helix domain AM442_RS08125 PF07690 Major Facilitator Superfamily AM442_RS08130 PF01263 Aldose 1-epimerase AM442_RS08145 PF03466 LysR substrate binding domain AM442_RS08145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM442_RS08155 PF07690 Major Facilitator Superfamily AM442_RS08160 PF00456 Transketolase, thiamine diphosphate binding domain AM442_RS08165 PF02779 Transketolase, pyrimidine binding domain AM442_RS08165 PF02780 Transketolase, C-terminal domain AM442_RS08170 PF02574 Homocysteine S-methyltransferase AM442_RS08170 PF00809 Pterin binding enzyme AM442_RS08170 PF02965 Vitamin B12 dependent methionine synthase, activation domain AM442_RS08170 PF02310 B12 binding domain AM442_RS08170 PF02607 B12 binding domain AM442_RS08175 PF01384 Phosphate transporter family AM442_RS08180 PF00291 Pyridoxal-phosphate dependent enzyme AM442_RS08195 PF03781 Sulfatase-modifying factor enzyme 1 AM442_RS08200 PF00884 Sulfatase AM442_RS08210 PF01106 NifU-like domain AM442_RS08210 PF01521 Iron-sulphur cluster biosynthesis AM442_RS08215 PF07715 TonB-dependent Receptor Plug Domain AM442_RS08215 PF00593 TonB dependent receptor AM442_RS08225 PF00561 alpha/beta hydrolase fold AM442_RS08230 PF00484 Carbonic anhydrase AM442_RS08235 PF13472 GDSL-like Lipase/Acylhydrolase family AM442_RS08240 PF00005 ABC transporter AM442_RS08250 PF01694 Rhomboid family AM442_RS08255 PF00912 Transglycosylase AM442_RS08260 PF13089 Polyphosphate kinase N-terminal domain AM442_RS08260 PF02503 Polyphosphate kinase middle domain AM442_RS08260 PF13090 Polyphosphate kinase C-terminal domain 2 AM442_RS08260 PF17941 Polyphosphate kinase C-terminal domain 1 AM442_RS08275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM442_RS08275 PF03466 LysR substrate binding domain AM442_RS08280 PF00561 alpha/beta hydrolase fold AM442_RS08285 PF18113 Rubredoxin binding C-terminal domain AM442_RS08285 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM442_RS08290 PF00301 Rubredoxin AM442_RS08305 PF01336 OB-fold nucleic acid binding domain AM442_RS08305 PF00152 tRNA synthetases class II (D, K and N) AM442_RS08310 PF14052 Capsule assembly protein Wzi AM442_RS08320 PF01507 Phosphoadenosine phosphosulfate reductase family AM442_RS08325 PF00009 Elongation factor Tu GTP binding domain AM442_RS08340 PF03600 Citrate transporter AM442_RS08350 PF00571 CBS domain AM442_RS08350 PF01595 Cyclin M transmembrane N-terminal domain AM442_RS08350 PF03471 Transporter associated domain AM442_RS08355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM442_RS08355 PF03466 LysR substrate binding domain AM442_RS08360 PF00463 Isocitrate lyase family AM442_RS08375 PF01774 UreD urease accessory protein AM442_RS08380 PF00547 Urease, gamma subunit AM442_RS08390 PF00699 Urease beta subunit AM442_RS08400 PF01979 Amidohydrolase family AM442_RS08400 PF00449 Urease alpha-subunit, N-terminal domain AM442_RS08405 PF05194 UreE urease accessory protein, C-terminal domain AM442_RS08405 PF02814 UreE urease accessory protein, N-terminal domain AM442_RS08410 PF01730 UreF AM442_RS08415 PF02492 CobW/HypB/UreG, nucleotide-binding domain AM442_RS08430 PF03717 Penicillin-binding Protein dimerisation domain AM442_RS08430 PF00905 Penicillin binding protein transpeptidase domain AM442_RS08445 PF05191 Adenylate kinase, active site lid AM442_RS08455 PF10576 Iron-sulfur binding domain of endonuclease III AM442_RS08455 PF00633 Helix-hairpin-helix motif AM442_RS08455 PF00730 HhH-GPD superfamily base excision DNA repair protein AM442_RS08460 PF04060 Putative Fe-S cluster AM442_RS08465 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AM442_RS08465 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AM442_RS08480 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AM442_RS08485 PF02590 Predicted SPOUT methyltransferase AM442_RS08490 PF00004 ATPase family associated with various cellular activities (AAA) AM442_RS08490 PF02190 ATP-dependent protease La (LON) substrate-binding domain AM442_RS08490 PF05362 Lon protease (S16) C-terminal proteolytic domain AM442_RS08500 PF05662 Coiled stalk of trimeric autotransporter adhesin AM442_RS08500 PF03895 YadA-like membrane anchor domain AM442_RS08500 PF13018 Extended Signal Peptide of Type V secretion system AM442_RS08500 PF05658 Head domain of trimeric autotransporter adhesin AM442_RS08505 PF04355 SmpA / OmlA family AM442_RS08505 PF00691 OmpA family AM442_RS08510 PF01812 5-formyltetrahydrofolate cyclo-ligase family AM442_RS08550 PF05195 Aminopeptidase P, N-terminal domain AM442_RS08550 PF00557 Metallopeptidase family M24 AM442_RS08555 PF01494 FAD binding domain AM442_RS08560 PF01494 FAD binding domain AM442_RS08570 PF13411 MerR HTH family regulatory protein AM442_RS08580 PF01810 LysE type translocator AM442_RS08585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM442_RS08585 PF03466 LysR substrate binding domain AM442_RS08595 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM442_RS08600 PF02021 Uncharacterised protein family UPF0102 AM442_RS08605 PF04972 BON domain AM442_RS08615 PF09297 NADH pyrophosphatase zinc ribbon domain AM442_RS08615 PF00293 NUDIX domain AM442_RS08625 PF00929 Exonuclease AM442_RS08630 PF01476 LysM domain AM442_RS08630 PF01476 LysM domain AM442_RS08630 PF01464 Transglycosylase SLT domain AM442_RS08630 PF01464 Transglycosylase SLT domain AM442_RS08635 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM442_RS08640 PF00528 Binding-protein-dependent transport system inner membrane component AM442_RS08645 PF12911 N-terminal TM domain of oligopeptide transport permease C AM442_RS08645 PF00528 Binding-protein-dependent transport system inner membrane component AM442_RS08650 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM442_RS08650 PF00005 ABC transporter AM442_RS08655 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM442_RS08655 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM442_RS08660 PF07715 TonB-dependent Receptor Plug Domain AM442_RS08660 PF00593 TonB dependent receptor AM442_RS08670 PF00929 Exonuclease AM442_RS08675 PF01979 Amidohydrolase family AM442_RS08680 PF01590 GAF domain AM442_RS08680 PF00990 Diguanylate cyclase, GGDEF domain AM442_RS08680 PF00563 EAL domain AM442_RS08680 PF00360 Phytochrome region AM442_RS08685 PF00764 Arginosuccinate synthase AM442_RS08690 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM442_RS08690 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM442_RS08700 PF03180 NLPA lipoprotein AM442_RS08745 PF04717 Type VI secretion system, phage-baseplate injector AM442_RS08745 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) AM442_RS08745 PF13296 Putative type VI secretion system Rhs element Vgr AM442_RS08750 PF03527 RHS protein AM442_RS08750 PF05593 RHS Repeat AM442_RS08790 PF00324 Amino acid permease AM442_RS08795 PF01266 FAD dependent oxidoreductase AM442_RS08800 PF00324 Amino acid permease AM442_RS08810 PF00392 Bacterial regulatory proteins, gntR family AM442_RS08810 PF07729 FCD domain AM442_RS08820 PF00171 Aldehyde dehydrogenase family AM442_RS08830 PF00202 Aminotransferase class-III AM442_RS08835 PF04958 Arginine N-succinyltransferase beta subunit AM442_RS08840 PF00324 Amino acid permease AM442_RS08845 PF00171 Aldehyde dehydrogenase family AM442_RS08850 PF12833 Helix-turn-helix domain AM442_RS08850 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AM442_RS08860 PF00892 EamA-like transporter family AM442_RS08865 PF08666 SAF domain AM442_RS08865 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AM442_RS08870 PF07690 Major Facilitator Superfamily AM442_RS08875 PF13378 Enolase C-terminal domain-like AM442_RS08880 PF00701 Dihydrodipicolinate synthetase family AM442_RS08885 PF00171 Aldehyde dehydrogenase family AM442_RS08890 PF07729 FCD domain AM442_RS08890 PF00392 Bacterial regulatory proteins, gntR family AM442_RS08900 PF13610 DDE domain AM442_RS08920 PF03573 outer membrane porin, OprD family AM442_RS08925 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM442_RS08925 PF02770 Acyl-CoA dehydrogenase, middle domain AM442_RS08925 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM442_RS08935 PF00171 Aldehyde dehydrogenase family AM442_RS08940 PF00378 Enoyl-CoA hydratase/isomerase AM442_RS08945 PF07690 Major Facilitator Superfamily AM442_RS08960 PF00175 Oxidoreductase NAD-binding domain AM442_RS08960 PF00111 2Fe-2S iron-sulfur cluster binding domain AM442_RS08965 PF00355 Rieske [2Fe-2S] domain AM442_RS08975 PF03781 Sulfatase-modifying factor enzyme 1 AM442_RS08980 PF00884 Sulfatase AM442_RS08985 PF07690 Major Facilitator Superfamily AM442_RS08995 PF05199 GMC oxidoreductase AM442_RS09000 PF07859 alpha/beta hydrolase fold AM442_RS09005 PF00106 short chain dehydrogenase AM442_RS09010 PF00743 Flavin-binding monooxygenase-like AM442_RS09015 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AM442_RS09015 PF12833 Helix-turn-helix domain AM442_RS09020 PF04072 Leucine carboxyl methyltransferase AM442_RS09025 PF00743 Flavin-binding monooxygenase-like AM442_RS09030 PF00106 short chain dehydrogenase AM442_RS09045 PF00440 Bacterial regulatory proteins, tetR family AM442_RS09045 PF17932 Tetracyclin repressor-like, C-terminal domain AM442_RS09050 PF02678 Pirin AM442_RS09050 PF17954 Quercetinase C-terminal cupin domain AM442_RS09060 PF00106 short chain dehydrogenase AM442_RS09065 PF00743 Flavin-binding monooxygenase-like AM442_RS09075 PF00860 Permease family AM442_RS09080 PF00962 Adenosine/AMP deaminase AM442_RS09085 PF01292 Prokaryotic cytochrome b561 AM442_RS09095 PF01351 Ribonuclease HII AM442_RS09100 PF02599 Global regulator protein family AM442_RS09105 PF01842 ACT domain AM442_RS09105 PF13840 ACT domain AM442_RS09105 PF00696 Amino acid kinase family AM442_RS09110 PF02272 DHHA1 domain AM442_RS09110 PF01411 tRNA synthetases class II (A) AM442_RS09110 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AM442_RS09115 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AM442_RS09115 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AM442_RS09120 PF13393 Histidyl-tRNA synthetase AM442_RS09125 PF00709 Adenylosuccinate synthetase AM442_RS09140 PF00248 Aldo/keto reductase family AM442_RS09145 PF13545 Crp-like helix-turn-helix domain AM442_RS09145 PF00027 Cyclic nucleotide-binding domain AM442_RS09150 PF02566 OsmC-like protein AM442_RS09165 PF07724 AAA domain (Cdc48 subfamily) AM442_RS09165 PF17871 AAA lid domain AM442_RS09165 PF02861 Clp amino terminal domain, pathogenicity island component AM442_RS09165 PF10431 C-terminal, D2-small domain, of ClpB protein AM442_RS09165 PF00004 ATPase family associated with various cellular activities (AAA) AM442_RS09180 PF01170 Putative RNA methylase family UPF0020 AM442_RS09180 PF10672 S-adenosylmethionine-dependent methyltransferase AM442_RS09180 PF02926 THUMP domain AM442_RS09190 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AM442_RS09190 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AM442_RS09195 PF01979 Amidohydrolase family AM442_RS09200 PF00691 OmpA family AM442_RS09200 PF13488 Glycine zipper AM442_RS09210 PF13417 Glutathione S-transferase, N-terminal domain AM442_RS09210 PF00043 Glutathione S-transferase, C-terminal domain AM442_RS09215 PF02390 Putative methyltransferase AM442_RS09225 PF02798 Glutathione S-transferase, N-terminal domain AM442_RS09225 PF00043 Glutathione S-transferase, C-terminal domain AM442_RS09235 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM442_RS09235 PF13192 Thioredoxin domain AM442_RS09255 PF10417 C-terminal domain of 1-Cys peroxiredoxin AM442_RS09255 PF00578 AhpC/TSA family AM442_RS09260 PF00271 Helicase conserved C-terminal domain AM442_RS09260 PF04408 Helicase associated domain (HA2) AM442_RS09260 PF11898 Domain of unknown function (DUF3418) AM442_RS09260 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AM442_RS09260 PF00270 DEAD/DEAH box helicase AM442_RS09265 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AM442_RS09265 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AM442_RS09275 PF07690 Major Facilitator Superfamily AM442_RS09280 PF03594 Benzoate membrane transport protein AM442_RS09285 PF00106 short chain dehydrogenase AM442_RS09290 PF00111 2Fe-2S iron-sulfur cluster binding domain AM442_RS09290 PF00970 Oxidoreductase FAD-binding domain AM442_RS09290 PF00175 Oxidoreductase NAD-binding domain AM442_RS09295 PF00866 Ring hydroxylating beta subunit AM442_RS09300 PF00355 Rieske [2Fe-2S] domain AM442_RS09300 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AM442_RS09305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM442_RS09305 PF03466 LysR substrate binding domain AM442_RS09315 PF00970 Oxidoreductase FAD-binding domain AM442_RS09315 PF00111 2Fe-2S iron-sulfur cluster binding domain AM442_RS09315 PF00175 Oxidoreductase NAD-binding domain AM442_RS09325 PF02332 Methane/Phenol/Toluene Hydroxylase AM442_RS09325 PF04945 YHS domain AM442_RS09330 PF02406 MmoB/DmpM family AM442_RS09335 PF02332 Methane/Phenol/Toluene Hydroxylase AM442_RS09340 PF06099 Phenol hydroxylase subunit AM442_RS09345 PF00158 Sigma-54 interaction domain AM442_RS09345 PF06505 Activator of aromatic catabolism AM442_RS09345 PF02830 V4R domain AM442_RS09345 PF02954 Bacterial regulatory protein, Fis family AM442_RS09355 PF00403 Heavy-metal-associated domain AM442_RS09360 PF00376 MerR family regulatory protein AM442_RS09360 PF09278 MerR, DNA binding AM442_RS09400 PF13742 OB-fold nucleic acid binding domain AM442_RS09400 PF02601 Exonuclease VII, large subunit AM442_RS09435 PF01810 LysE type translocator AM442_RS09440 PF00313 'Cold-shock' DNA-binding domain AM442_RS09450 PF14748 Pyrroline-5-carboxylate reductase dimerisation AM442_RS09450 PF03807 NADP oxidoreductase coenzyme F420-dependent AM442_RS09480 PF07690 Major Facilitator Superfamily AM442_RS09485 PF01638 HxlR-like helix-turn-helix AM442_RS09530 PF09190 DALR domain AM442_RS09530 PF01406 tRNA synthetases class I (C) catalytic domain AM442_RS09535 PF00571 CBS domain AM442_RS09535 PF01380 SIS domain AM442_RS09550 PF03968 OstA-like protein AM442_RS09555 PF00005 ABC transporter AM442_RS09555 PF12399 Branched-chain amino acid ATP-binding cassette transporter AM442_RS09560 PF02321 Outer membrane efflux protein AM442_RS09565 PF03412 Peptidase C39 family AM442_RS09565 PF00664 ABC transporter transmembrane region AM442_RS09565 PF00005 ABC transporter AM442_RS09575 PF01205 Uncharacterized protein family UPF0029 AM442_RS09580 PF00132 Bacterial transferase hexapeptide (six repeats) AM442_RS09590 PF01596 O-methyltransferase AM442_RS09600 PF00037 4Fe-4S binding domain AM442_RS09600 PF11953 Domain of unknown function (DUF3470) AM442_RS09610 PF05192 MutS domain III AM442_RS09610 PF00488 MutS domain V AM442_RS09610 PF05190 MutS family domain IV AM442_RS09610 PF01624 MutS domain I AM442_RS09610 PF05188 MutS domain II AM442_RS09615 PF01037 Lrp/AsnC ligand binding domain AM442_RS09620 PF00892 EamA-like transporter family AM442_RS09625 PF03707 Bacterial signalling protein N terminal repeat AM442_RS09625 PF00990 Diguanylate cyclase, GGDEF domain AM442_RS09625 PF00563 EAL domain AM442_RS09630 PF03279 Bacterial lipid A biosynthesis acyltransferase AM442_RS09645 PF07690 Major Facilitator Superfamily AM442_RS09675 PF02525 Flavodoxin-like fold AM442_RS09700 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM442_RS09700 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM442_RS09730 PF13296 Putative type VI secretion system Rhs element Vgr AM442_RS09730 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) AM442_RS09730 PF04717 Type VI secretion system, phage-baseplate injector AM442_RS09735 PF03527 RHS protein AM442_RS09735 PF05593 RHS Repeat AM442_RS09755 PF13737 Transposase DDE domain AM442_RS09770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM442_RS09770 PF03466 LysR substrate binding domain AM442_RS09775 PF01566 Natural resistance-associated macrophage protein AM442_RS09780 PF03746 LamB/YcsF family AM442_RS09785 PF07286 Protein of unknown function (DUF1445) AM442_RS09795 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM442_RS09795 PF02785 Biotin carboxylase C-terminal domain AM442_RS09795 PF00364 Biotin-requiring enzyme AM442_RS09795 PF00289 Biotin carboxylase, N-terminal domain AM442_RS09800 PF00654 Voltage gated chloride channel AM442_RS09825 PF08240 Alcohol dehydrogenase GroES-like domain AM442_RS09825 PF00107 Zinc-binding dehydrogenase AM442_RS09825 PF13823 Alcohol dehydrogenase GroES-associated AM442_RS09840 PF02785 Biotin carboxylase C-terminal domain AM442_RS09840 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM442_RS09840 PF00289 Biotin carboxylase, N-terminal domain AM442_RS09845 PF02525 Flavodoxin-like fold AM442_RS09850 PF01638 HxlR-like helix-turn-helix AM442_RS09860 PF08753 NikR C terminal nickel binding domain AM442_RS09860 PF01402 Ribbon-helix-helix protein, copG family AM442_RS09865 PF01425 Amidase AM442_RS09870 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM442_RS09875 PF00005 ABC transporter AM442_RS09905 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath AM442_RS09920 PF05947 Type VI secretion system, TssF AM442_RS09935 PF06761 Intracellular multiplication and human macrophage-killing AM442_RS09935 PF14331 ImcF-related N-terminal domain AM442_RS09935 PF06744 Type VI secretion protein IcmF C-terminal AM442_RS09945 PF00691 OmpA family AM442_RS09945 PF01389 OmpA-like transmembrane domain AM442_RS09955 PF00004 ATPase family associated with various cellular activities (AAA) AM442_RS09955 PF07724 AAA domain (Cdc48 subfamily) AM442_RS09955 PF10431 C-terminal, D2-small domain, of ClpB protein AM442_RS09955 PF17871 AAA lid domain AM442_RS09960 PF06812 ImpA, N-terminal, type VI secretion system AM442_RS09965 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE AM442_RS09985 PF03466 LysR substrate binding domain AM442_RS09985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM442_RS09995 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AM442_RS10000 PF07690 Major Facilitator Superfamily AM442_RS10015 PF02677 Epoxyqueuosine reductase QueH AM442_RS10030 PF00376 MerR family regulatory protein AM442_RS10030 PF09278 MerR, DNA binding AM442_RS10045 PF00701 Dihydrodipicolinate synthetase family AM442_RS10055 PF00392 Bacterial regulatory proteins, gntR family AM442_RS10060 PF05544 Proline racemase AM442_RS10065 PF01266 FAD dependent oxidoreductase AM442_RS10075 PF04324 BFD-like [2Fe-2S] binding domain AM442_RS10075 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM442_RS10085 PF00083 Sugar (and other) transporter AM442_RS10090 PF00171 Aldehyde dehydrogenase family AM442_RS10095 PF13520 Amino acid permease AM442_RS10100 PF03313 Serine dehydratase alpha chain AM442_RS10100 PF03315 Serine dehydratase beta chain AM442_RS10105 PF01575 MaoC like domain AM442_RS10105 PF00171 Aldehyde dehydrogenase family AM442_RS10110 PF05138 Phenylacetic acid catabolic protein AM442_RS10115 PF06243 Phenylacetic acid degradation B AM442_RS10120 PF05138 Phenylacetic acid catabolic protein AM442_RS10125 PF01883 Iron-sulfur cluster assembly protein AM442_RS10130 PF00111 2Fe-2S iron-sulfur cluster binding domain AM442_RS10130 PF00970 Oxidoreductase FAD-binding domain AM442_RS10130 PF00175 Oxidoreductase NAD-binding domain AM442_RS10135 PF00378 Enoyl-CoA hydratase/isomerase AM442_RS10140 PF00378 Enoyl-CoA hydratase/isomerase AM442_RS10145 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM442_RS10145 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM442_RS10145 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain AM442_RS10150 PF02803 Thiolase, C-terminal domain AM442_RS10150 PF00108 Thiolase, N-terminal domain AM442_RS10155 PF14535 AMP-binding enzyme C-terminal domain AM442_RS10155 PF00501 AMP-binding enzyme AM442_RS10160 PF07848 PaaX-like protein AM442_RS10160 PF08223 PaaX-like protein C-terminal domain AM442_RS10165 PF00132 Bacterial transferase hexapeptide (six repeats) AM442_RS10170 PF03061 Thioesterase superfamily AM442_RS10175 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AM442_RS10200 PF00199 Catalase AM442_RS10205 PF01292 Prokaryotic cytochrome b561 AM442_RS10225 PF12697 Alpha/beta hydrolase family AM442_RS10230 PF01613 Flavin reductase like domain AM442_RS10235 PF00296 Luciferase-like monooxygenase AM442_RS10240 PF00171 Aldehyde dehydrogenase family AM442_RS10250 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AM442_RS10260 PF00171 Aldehyde dehydrogenase family AM442_RS10265 PF02627 Carboxymuconolactone decarboxylase family AM442_RS10270 PF03466 LysR substrate binding domain AM442_RS10270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM442_RS10275 PF02525 Flavodoxin-like fold AM442_RS10280 PF01614 Bacterial transcriptional regulator AM442_RS10280 PF09339 IclR helix-turn-helix domain AM442_RS10285 PF01494 FAD binding domain AM442_RS10290 PF07702 UTRA domain AM442_RS10290 PF00392 Bacterial regulatory proteins, gntR family AM442_RS10300 PF00005 ABC transporter AM442_RS10300 PF08402 TOBE domain AM442_RS10305 PF00528 Binding-protein-dependent transport system inner membrane component AM442_RS10310 PF01266 FAD dependent oxidoreductase AM442_RS10315 PF00266 Aminotransferase class-V AM442_RS10320 PF13419 Haloacid dehalogenase-like hydrolase AM442_RS10325 PF07690 Major Facilitator Superfamily AM442_RS10330 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM442_RS10330 PF02770 Acyl-CoA dehydrogenase, middle domain AM442_RS10330 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM442_RS10350 PF09339 IclR helix-turn-helix domain AM442_RS10355 PF00378 Enoyl-CoA hydratase/isomerase AM442_RS10360 PF03060 Nitronate monooxygenase AM442_RS10370 PF16861 Carbamoyltransferase C-terminus AM442_RS10370 PF02543 Carbamoyltransferase N-terminus AM442_RS10375 PF01810 LysE type translocator AM442_RS10385 PF09339 IclR helix-turn-helix domain AM442_RS10390 PF00108 Thiolase, N-terminal domain AM442_RS10390 PF02803 Thiolase, C-terminal domain AM442_RS10395 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain AM442_RS10395 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM442_RS10395 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM442_RS10405 PF00378 Enoyl-CoA hydratase/isomerase AM442_RS10410 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM442_RS10410 PF02770 Acyl-CoA dehydrogenase, middle domain AM442_RS10410 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM442_RS10415 PF07690 Major Facilitator Superfamily AM442_RS10420 PF01144 Coenzyme A transferase AM442_RS10425 PF01144 Coenzyme A transferase AM442_RS10435 PF07690 Major Facilitator Superfamily AM442_RS10445 PF02770 Acyl-CoA dehydrogenase, middle domain AM442_RS10445 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM442_RS10445 PF12806 Acetyl-CoA dehydrogenase C-terminal like AM442_RS10445 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM442_RS10460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM442_RS10460 PF03466 LysR substrate binding domain AM442_RS10465 PF00682 HMGL-like AM442_RS10470 PF00364 Biotin-requiring enzyme AM442_RS10470 PF18140 Propionyl-coenzyme A carboxylase BT domain AM442_RS10470 PF02785 Biotin carboxylase C-terminal domain AM442_RS10470 PF00289 Biotin carboxylase, N-terminal domain AM442_RS10470 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM442_RS10475 PF00378 Enoyl-CoA hydratase/isomerase AM442_RS10480 PF01039 Carboxyl transferase domain AM442_RS10485 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM442_RS10485 PF02770 Acyl-CoA dehydrogenase, middle domain AM442_RS10485 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM442_RS10490 PF00440 Bacterial regulatory proteins, tetR family AM442_RS10495 PF13193 AMP-binding enzyme C-terminal domain AM442_RS10495 PF00501 AMP-binding enzyme AM442_RS10515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM442_RS10515 PF03466 LysR substrate binding domain AM442_RS10550 PF02464 Competence-damaged protein AM442_RS10550 PF18146 Damage-inducible protein CinA KH domain AM442_RS10550 PF00994 Probable molybdopterin binding domain AM442_RS10560 PF18011 C-terminal domain found in long catalases AM442_RS10560 PF06628 Catalase-related immune-responsive AM442_RS10560 PF00199 Catalase AM442_RS10585 PF00717 Peptidase S24-like AM442_RS10595 PF01037 Lrp/AsnC ligand binding domain AM442_RS10595 PF13404 AsnC-type helix-turn-helix domain AM442_RS10605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM442_RS10605 PF00072 Response regulator receiver domain AM442_RS10605 PF00512 His Kinase A (phospho-acceptor) domain AM442_RS10605 PF09308 LuxQ, periplasmic AM442_RS10610 PF00072 Response regulator receiver domain AM442_RS10625 PF00528 Binding-protein-dependent transport system inner membrane component AM442_RS10630 PF00528 Binding-protein-dependent transport system inner membrane component AM442_RS10635 PF00005 ABC transporter AM442_RS10640 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM442_RS10645 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM442_RS10655 PF03466 LysR substrate binding domain AM442_RS10655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM442_RS10660 PF01810 LysE type translocator AM442_RS10670 PF00266 Aminotransferase class-V AM442_RS10680 PF00132 Bacterial transferase hexapeptide (six repeats) AM442_RS10685 PF00581 Rhodanese-like domain AM442_RS10695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM442_RS10695 PF03466 LysR substrate binding domain AM442_RS10700 PF02798 Glutathione S-transferase, N-terminal domain AM442_RS10705 PF14834 Glutathione S-transferase, C-terminal domain AM442_RS10705 PF02798 Glutathione S-transferase, N-terminal domain AM442_RS10710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM442_RS10710 PF03466 LysR substrate binding domain AM442_RS10715 PF03788 LrgA family AM442_RS10720 PF04172 LrgB-like family AM442_RS10725 PF00392 Bacterial regulatory proteins, gntR family AM442_RS10725 PF00155 Aminotransferase class I and II AM442_RS10740 PF07690 Major Facilitator Superfamily AM442_RS10750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM442_RS10750 PF03466 LysR substrate binding domain AM442_RS10755 PF16957 Malonate decarboxylase, alpha subunit, transporter AM442_RS10760 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AM442_RS10765 PF06857 Malonate decarboxylase delta subunit (MdcD) AM442_RS10770 PF01039 Carboxyl transferase domain AM442_RS10780 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG AM442_RS10785 PF00698 Acyl transferase domain AM442_RS10800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM442_RS10800 PF03466 LysR substrate binding domain AM442_RS10805 PF00392 Bacterial regulatory proteins, gntR family AM442_RS10805 PF00155 Aminotransferase class I and II AM442_RS10815 PF02322 Cytochrome bd terminal oxidase subunit II AM442_RS10820 PF01654 Cytochrome bd terminal oxidase subunit I AM442_RS10840 PF00296 Luciferase-like monooxygenase AM442_RS10845 PF00083 Sugar (and other) transporter AM442_RS10855 PF13610 DDE domain AM442_RS10860 PF01636 Phosphotransferase enzyme family AM442_RS10875 PF13610 DDE domain AM442_RS10890 PF03466 LysR substrate binding domain AM442_RS10890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM442_RS10900 PF13382 Adenine deaminase C-terminal domain AM442_RS10900 PF01979 Amidohydrolase family AM442_RS10910 PF03960 ArsC family AM442_RS10915 PF01022 Bacterial regulatory protein, arsR family AM442_RS10920 PF01758 Sodium Bile acid symporter family AM442_RS10925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM442_RS10925 PF03466 LysR substrate binding domain AM442_RS10940 PF13192 Thioredoxin domain AM442_RS10940 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM442_RS10955 PF00132 Bacterial transferase hexapeptide (six repeats) AM442_RS10960 PF00588 SpoU rRNA Methylase family AM442_RS10965 PF14579 Helix-hairpin-helix motif AM442_RS10965 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AM442_RS10965 PF07733 Bacterial DNA polymerase III alpha NTPase domain AM442_RS10965 PF01336 OB-fold nucleic acid binding domain AM442_RS10965 PF02811 PHP domain AM442_RS10970 PF00710 Asparaginase, N-terminal AM442_RS10970 PF17763 Glutaminase/Asparaginase C-terminal domain AM442_RS10985 PF00375 Sodium:dicarboxylate symporter family AM442_RS10990 PF00155 Aminotransferase class I and II AM442_RS10995 PF01641 SelR domain AM442_RS11000 PF00255 Glutathione peroxidase AM442_RS11005 PF12852 Cupin AM442_RS11005 PF12833 Helix-turn-helix domain AM442_RS11015 PF00155 Aminotransferase class I and II AM442_RS11020 PF08335 GlnD PII-uridylyltransferase AM442_RS11020 PF01966 HD domain AM442_RS11020 PF01909 Nucleotidyltransferase domain AM442_RS11025 PF02222 ATP-grasp domain AM442_RS11035 PF05437 Branched-chain amino acid transport protein (AzlD) AM442_RS11040 PF03591 AzlC protein AM442_RS11065 PF06071 Protein of unknown function (DUF933) AM442_RS11065 PF01926 50S ribosome-binding GTPase AM442_RS11070 PF00528 Binding-protein-dependent transport system inner membrane component AM442_RS11075 PF09383 NIL domain AM442_RS11075 PF00005 ABC transporter AM442_RS11080 PF03180 NLPA lipoprotein AM442_RS11085 PF03180 NLPA lipoprotein AM442_RS11090 PF00296 Luciferase-like monooxygenase AM442_RS11100 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM442_RS11100 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AM442_RS11115 PF00528 Binding-protein-dependent transport system inner membrane component AM442_RS11120 PF00528 Binding-protein-dependent transport system inner membrane component AM442_RS11125 PF00005 ABC transporter AM442_RS11135 PF01037 Lrp/AsnC ligand binding domain AM442_RS11140 PF01709 Transcriptional regulator AM442_RS11150 PF00440 Bacterial regulatory proteins, tetR family AM442_RS11185 PF03466 LysR substrate binding domain AM442_RS11185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM442_RS11195 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AM442_RS11205 PF00892 EamA-like transporter family AM442_RS11230 PF00577 Outer membrane usher protein AM442_RS11230 PF13954 PapC N-terminal domain AM442_RS11230 PF13953 PapC C-terminal domain AM442_RS11235 PF02753 Pili assembly chaperone PapD, C-terminal domain AM442_RS11235 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM442_RS11240 PF16970 Type-1 fimbrial protein, A AM442_RS11255 PF04055 Radical SAM superfamily AM442_RS11255 PF06968 Biotin and Thiamin Synthesis associated domain AM442_RS11260 PF08331 Domain of unknown function (DUF1730) AM442_RS11265 PF03853 YjeF-related protein N-terminus AM442_RS11265 PF01256 Carbohydrate kinase AM442_RS11270 PF02075 Crossover junction endodeoxyribonuclease RuvC AM442_RS11285 PF00905 Penicillin binding protein transpeptidase domain AM442_RS11305 PF00438 S-adenosylmethionine synthetase, N-terminal domain AM442_RS11305 PF02772 S-adenosylmethionine synthetase, central domain AM442_RS11305 PF02773 S-adenosylmethionine synthetase, C-terminal domain AM442_RS11310 PF00456 Transketolase, thiamine diphosphate binding domain AM442_RS11310 PF02780 Transketolase, C-terminal domain AM442_RS11310 PF02779 Transketolase, pyrimidine binding domain AM442_RS11320 PF04264 YceI-like domain AM442_RS11330 PF09992 Phosphodiester glycosidase AM442_RS11340 PF05958 tRNA (Uracil-5-)-methyltransferase AM442_RS11345 PF04229 GrpB protein AM442_RS11350 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AM442_RS11350 PF00171 Aldehyde dehydrogenase family AM442_RS11350 PF01619 Proline dehydrogenase AM442_RS11350 PF14850 DNA-binding domain of Proline dehydrogenase AM442_RS11355 PF01037 Lrp/AsnC ligand binding domain AM442_RS11360 PF00474 Sodium:solute symporter family AM442_RS11365 PF02146 Sir2 family AM442_RS11370 PF01597 Glycine cleavage H-protein AM442_RS11375 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AM442_RS11375 PF12833 Helix-turn-helix domain AM442_RS11385 PF00005 ABC transporter AM442_RS11385 PF00664 ABC transporter transmembrane region AM442_RS11390 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) AM442_RS11395 PF06912 Protein of unknown function (DUF1275) AM442_RS11400 PF00375 Sodium:dicarboxylate symporter family AM442_RS11415 PF08007 Cupin superfamily protein AM442_RS11420 PF02545 Maf-like protein AM442_RS11430 PF00162 Phosphoglycerate kinase AM442_RS11440 PF01116 Fructose-bisphosphate aldolase class-II AM442_RS11445 PF00639 PPIC-type PPIASE domain AM442_RS11445 PF09312 SurA N-terminal domain AM442_RS11450 PF04453 LPS transport system D AM442_RS11450 PF03968 OstA-like protein AM442_RS11455 PF01636 Phosphotransferase enzyme family AM442_RS11460 PF00483 Nucleotidyl transferase AM442_RS11465 PF02527 rRNA small subunit methyltransferase G AM442_RS11470 PF13614 AAA domain AM442_RS11475 PF17762 HTH domain found in ParB protein AM442_RS11475 PF02195 ParB-like nuclease domain AM442_RS11480 PF01618 MotA/TolQ/ExbB proton channel family AM442_RS11490 PF00664 ABC transporter transmembrane region AM442_RS11490 PF00005 ABC transporter AM442_RS11495 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AM442_RS11500 PF02348 Cytidylyltransferase AM442_RS11505 PF09115 DNA polymerase III, delta subunit, C terminal AM442_RS11515 PF01026 TatD related DNase AM442_RS11530 PF07963 Prokaryotic N-terminal methylation motif AM442_RS11530 PF02501 Type II secretion system (T2SS), protein I AM442_RS11535 PF11612 Type II secretion system (T2SS), protein J AM442_RS11535 PF07963 Prokaryotic N-terminal methylation motif AM442_RS11540 PF03934 Type II secretion system (T2SS), protein K AM442_RS11550 PF03167 Uracil DNA glycosylase superfamily AM442_RS11560 PF14437 MafB19-like deaminase AM442_RS11570 PF02224 Cytidylate kinase AM442_RS11575 PF00575 S1 RNA binding domain AM442_RS11580 PF00216 Bacterial DNA-binding protein AM442_RS11590 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AM442_RS11600 PF00743 Flavin-binding monooxygenase-like AM442_RS11610 PF03969 AFG1-like ATPase AM442_RS11615 PF01274 Malate synthase AM442_RS11625 PF02472 Biopolymer transport protein ExbD/TolR AM442_RS11630 PF02472 Biopolymer transport protein ExbD/TolR AM442_RS11635 PF01618 MotA/TolQ/ExbB proton channel family AM442_RS11645 PF00593 TonB dependent receptor AM442_RS11645 PF07715 TonB-dependent Receptor Plug Domain AM442_RS11665 PF01432 Peptidase family M3 AM442_RS11670 PF00528 Binding-protein-dependent transport system inner membrane component AM442_RS11675 PF00528 Binding-protein-dependent transport system inner membrane component AM442_RS11680 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM442_RS11680 PF00005 ABC transporter AM442_RS11695 PF00459 Inositol monophosphatase family AM442_RS11705 PF01649 Ribosomal protein S20 AM442_RS11710 PF13460 NAD(P)H-binding AM442_RS11715 PF03737 Aldolase/RraA AM442_RS11735 PF02559 CarD-like/TRCF domain AM442_RS11735 PF00271 Helicase conserved C-terminal domain AM442_RS11735 PF03461 TRCF domain AM442_RS11735 PF17757 UvrB interaction domain AM442_RS11735 PF00270 DEAD/DEAH box helicase AM442_RS11745 PF00211 Adenylate and Guanylate cyclase catalytic domain AM442_RS11750 PF00111 2Fe-2S iron-sulfur cluster binding domain AM442_RS11755 PF00012 Hsp70 protein AM442_RS11760 PF07743 HSCB C-terminal oligomerisation domain AM442_RS11760 PF00226 DnaJ domain AM442_RS11765 PF01521 Iron-sulphur cluster biosynthesis AM442_RS11770 PF01592 NifU-like N terminal domain AM442_RS11775 PF00266 Aminotransferase class-V AM442_RS11780 PF02082 Transcriptional regulator AM442_RS11795 PF00216 Bacterial DNA-binding protein AM442_RS11800 PF00639 PPIC-type PPIASE domain AM442_RS11800 PF09312 SurA N-terminal domain AM442_RS11805 PF12852 Cupin AM442_RS11805 PF12833 Helix-turn-helix domain AM442_RS11810 PF00487 Fatty acid desaturase AM442_RS11815 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM442_RS11815 PF02770 Acyl-CoA dehydrogenase, middle domain AM442_RS11815 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM442_RS11820 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM442_RS11820 PF02770 Acyl-CoA dehydrogenase, middle domain AM442_RS11820 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM442_RS11825 PF03109 ABC1 family AM442_RS11835 PF04073 Aminoacyl-tRNA editing domain AM442_RS11840 PF06276 Ferric iron reductase FhuF-like transporter AM442_RS11840 PF04183 IucA / IucC family AM442_RS11845 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AM442_RS11850 PF07690 Major Facilitator Superfamily AM442_RS11855 PF06276 Ferric iron reductase FhuF-like transporter AM442_RS11855 PF04183 IucA / IucC family AM442_RS11860 PF06276 Ferric iron reductase FhuF-like transporter AM442_RS11860 PF04183 IucA / IucC family AM442_RS11875 PF00593 TonB dependent receptor AM442_RS11875 PF07715 TonB-dependent Receptor Plug Domain AM442_RS11910 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AM442_RS11915 PF02277 Phosphoribosyltransferase AM442_RS11920 PF00300 Histidine phosphatase superfamily (branch 1) AM442_RS11930 PF02654 Cobalamin-5-phosphate synthase AM442_RS11935 PF00793 DAHP synthetase I family AM442_RS11940 PF01925 Sulfite exporter TauE/SafE AM442_RS11960 PF07715 TonB-dependent Receptor Plug Domain AM442_RS11960 PF00593 TonB dependent receptor AM442_RS11965 PF02684 Lipid-A-disaccharide synthetase AM442_RS11975 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM442_RS11980 PF00005 ABC transporter AM442_RS12015 PF01230 HIT domain AM442_RS12040 PF13533 Biotin-lipoyl like AM442_RS12045 PF07690 Major Facilitator Superfamily AM442_RS12075 PF01975 Survival protein SurE AM442_RS12085 PF13291 ACT domain AM442_RS12085 PF04607 Region found in RelA / SpoT proteins AM442_RS12085 PF02824 TGS domain AM442_RS12135 PF12146 Serine aminopeptidase, S33 AM442_RS12140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM442_RS12140 PF03466 LysR substrate binding domain AM442_RS12150 PF12146 Serine aminopeptidase, S33 AM442_RS12155 PF12833 Helix-turn-helix domain AM442_RS12155 PF02311 AraC-like ligand binding domain AM442_RS12165 PF00512 His Kinase A (phospho-acceptor) domain AM442_RS12165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM442_RS12165 PF00672 HAMP domain AM442_RS12165 PF16527 Two-component sensor protein CpxA, periplasmic domain AM442_RS12170 PF00072 Response regulator receiver domain AM442_RS12170 PF00486 Transcriptional regulatory protein, C terminal AM442_RS12175 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM442_RS12175 PF00529 HlyD membrane-fusion protein of T1SS AM442_RS12180 PF00873 AcrB/AcrD/AcrF family AM442_RS12190 PF12146 Serine aminopeptidase, S33 AM442_RS12195 PF00743 Flavin-binding monooxygenase-like AM442_RS12200 PF01593 Flavin containing amine oxidoreductase AM442_RS12215 PF01266 FAD dependent oxidoreductase AM442_RS12230 PF00171 Aldehyde dehydrogenase family AM442_RS12235 PF05544 Proline racemase AM442_RS12240 PF00732 GMC oxidoreductase AM442_RS12240 PF05199 GMC oxidoreductase AM442_RS12250 PF00561 alpha/beta hydrolase fold AM442_RS12255 PF03447 Homoserine dehydrogenase, NAD binding domain AM442_RS12255 PF01958 Domain of unknown function DUF108 AM442_RS12265 PF02264 LamB porin AM442_RS12280 PF07690 Major Facilitator Superfamily AM442_RS12285 PF05199 GMC oxidoreductase AM442_RS12285 PF00732 GMC oxidoreductase AM442_RS12290 PF00892 EamA-like transporter family AM442_RS12295 PF01738 Dienelactone hydrolase family AM442_RS12300 PF00356 Bacterial regulatory proteins, lacI family AM442_RS12305 PF04172 LrgB-like family AM442_RS12315 PF00815 Histidinol dehydrogenase AM442_RS12320 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM442_RS12320 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM442_RS12320 PF00205 Thiamine pyrophosphate enzyme, central domain AM442_RS12325 PF00732 GMC oxidoreductase AM442_RS12325 PF05199 GMC oxidoreductase AM442_RS12330 PF07690 Major Facilitator Superfamily AM442_RS12335 PF00459 Inositol monophosphatase family AM442_RS12345 PF05690 Thiazole biosynthesis protein ThiG AM442_RS12350 PF02264 LamB porin AM442_RS12360 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM442_RS12360 PF00205 Thiamine pyrophosphate enzyme, central domain AM442_RS12360 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM442_RS12370 PF00356 Bacterial regulatory proteins, lacI family AM442_RS12380 PF00732 GMC oxidoreductase AM442_RS12380 PF05199 GMC oxidoreductase AM442_RS12385 PF00933 Glycosyl hydrolase family 3 N terminal domain AM442_RS12395 PF00293 NUDIX domain AM442_RS12400 PF00248 Aldo/keto reductase family AM442_RS12415 PF13091 PLD-like domain AM442_RS12435 PF01244 Membrane dipeptidase (Peptidase family M19) AM442_RS12440 PF13186 Iron-sulfur cluster-binding domain AM442_RS12440 PF04055 Radical SAM superfamily AM442_RS12445 PF05402 Coenzyme PQQ synthesis protein D (PqqD) AM442_RS12450 PF03070 TENA/THI-4/PQQC family AM442_RS12455 PF12706 Beta-lactamase superfamily domain AM442_RS12460 PF08042 PqqA family AM442_RS12465 PF13089 Polyphosphate kinase N-terminal domain AM442_RS12465 PF17941 Polyphosphate kinase C-terminal domain 1 AM442_RS12465 PF13090 Polyphosphate kinase C-terminal domain 2 AM442_RS12465 PF02503 Polyphosphate kinase middle domain AM442_RS12480 PF01420 Type I restriction modification DNA specificity domain AM442_RS12490 PF02384 N-6 DNA Methylase AM442_RS12495 PF00149 Calcineurin-like phosphoesterase AM442_RS12505 PF00857 Isochorismatase family AM442_RS12505 PF00550 Phosphopantetheine attachment site AM442_RS12510 PF00106 short chain dehydrogenase AM442_RS12515 PF00005 ABC transporter AM442_RS12515 PF03459 TOBE domain AM442_RS12520 PF00528 Binding-protein-dependent transport system inner membrane component AM442_RS12530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM442_RS12530 PF03459 TOBE domain AM442_RS12535 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AM442_RS12535 PF00355 Rieske [2Fe-2S] domain AM442_RS12540 PF00866 Ring hydroxylating beta subunit AM442_RS12545 PF00175 Oxidoreductase NAD-binding domain AM442_RS12545 PF00111 2Fe-2S iron-sulfur cluster binding domain AM442_RS12545 PF00970 Oxidoreductase FAD-binding domain AM442_RS12550 PF12833 Helix-turn-helix domain AM442_RS12550 PF14525 AraC-binding-like domain AM442_RS12560 PF01613 Flavin reductase like domain AM442_RS12575 PF01738 Dienelactone hydrolase family AM442_RS12580 PF07690 Major Facilitator Superfamily AM442_RS12585 PF12833 Helix-turn-helix domain AM442_RS12585 PF06719 AraC-type transcriptional regulator N-terminus AM442_RS12605 PF00440 Bacterial regulatory proteins, tetR family AM442_RS12625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM442_RS12625 PF03466 LysR substrate binding domain AM442_RS12630 PF01144 Coenzyme A transferase AM442_RS12635 PF01144 Coenzyme A transferase AM442_RS12640 PF02667 Short chain fatty acid transporter AM442_RS12645 PF02803 Thiolase, C-terminal domain AM442_RS12645 PF00108 Thiolase, N-terminal domain AM442_RS12650 PF03466 LysR substrate binding domain AM442_RS12650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM442_RS12655 PF03466 LysR substrate binding domain AM442_RS12655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM442_RS12670 PF10415 Fumarase C C-terminus AM442_RS12670 PF00206 Lyase AM442_RS12675 PF07715 TonB-dependent Receptor Plug Domain AM442_RS12675 PF00593 TonB dependent receptor AM442_RS12680 PF00083 Sugar (and other) transporter AM442_RS12695 PF00005 ABC transporter AM442_RS12700 PF00528 Binding-protein-dependent transport system inner membrane component AM442_RS12705 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AM442_RS12720 PF00392 Bacterial regulatory proteins, gntR family AM442_RS12720 PF07702 UTRA domain AM442_RS12730 PF02525 Flavodoxin-like fold AM442_RS12735 PF01638 HxlR-like helix-turn-helix AM442_RS12740 PF12833 Helix-turn-helix domain AM442_RS12740 PF06445 GyrI-like small molecule binding domain AM442_RS12755 PF01925 Sulfite exporter TauE/SafE AM442_RS12760 PF04273 Putative phosphatase (DUF442) AM442_RS12760 PF00753 Metallo-beta-lactamase superfamily AM442_RS12765 PF04273 Putative phosphatase (DUF442) AM442_RS12765 PF00753 Metallo-beta-lactamase superfamily AM442_RS12770 PF02954 Bacterial regulatory protein, Fis family AM442_RS12770 PF00158 Sigma-54 interaction domain AM442_RS12770 PF00072 Response regulator receiver domain AM442_RS12775 PF01062 Bestrophin, RFP-TM, chloride channel AM442_RS12780 PF08240 Alcohol dehydrogenase GroES-like domain AM442_RS12780 PF00107 Zinc-binding dehydrogenase AM442_RS12785 PF00106 short chain dehydrogenase AM442_RS12790 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM442_RS12790 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM442_RS12795 PF02817 e3 binding domain AM442_RS12795 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AM442_RS12795 PF00364 Biotin-requiring enzyme AM442_RS12800 PF02780 Transketolase, C-terminal domain AM442_RS12800 PF02779 Transketolase, pyrimidine binding domain AM442_RS12805 PF00676 Dehydrogenase E1 component AM442_RS12810 PF13737 Transposase DDE domain AM442_RS12815 PF04055 Radical SAM superfamily AM442_RS12830 PF00990 Diguanylate cyclase, GGDEF domain AM442_RS12830 PF08448 PAS fold AM442_RS12835 PF01264 Chorismate synthase AM442_RS12840 PF05175 Methyltransferase small domain AM442_RS12845 PF00291 Pyridoxal-phosphate dependent enzyme AM442_RS12855 PF01434 Peptidase family M41 AM442_RS12855 PF17862 AAA+ lid domain AM442_RS12855 PF00004 ATPase family associated with various cellular activities (AAA) AM442_RS12865 PF05166 YcgL domain AM442_RS12910 PF06628 Catalase-related immune-responsive AM442_RS12910 PF00199 Catalase AM442_RS12915 PF00561 alpha/beta hydrolase fold AM442_RS12925 PF00171 Aldehyde dehydrogenase family AM442_RS12930 PF08240 Alcohol dehydrogenase GroES-like domain AM442_RS12930 PF00107 Zinc-binding dehydrogenase AM442_RS12935 PF00474 Sodium:solute symporter family AM442_RS12940 PF04341 Protein of unknown function, DUF485 AM442_RS12945 PF00501 AMP-binding enzyme AM442_RS12945 PF13193 AMP-binding enzyme C-terminal domain AM442_RS12955 PF00158 Sigma-54 interaction domain AM442_RS12955 PF06506 Propionate catabolism activator AM442_RS12955 PF02954 Bacterial regulatory protein, Fis family AM442_RS12965 PF02770 Acyl-CoA dehydrogenase, middle domain AM442_RS12965 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM442_RS12965 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM442_RS12980 PF01636 Phosphotransferase enzyme family AM442_RS12985 PF00171 Aldehyde dehydrogenase family AM442_RS12995 PF07690 Major Facilitator Superfamily AM442_RS13000 PF00920 Dehydratase family AM442_RS13005 PF07729 FCD domain AM442_RS13005 PF00392 Bacterial regulatory proteins, gntR family AM442_RS13015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM442_RS13015 PF03466 LysR substrate binding domain AM442_RS13020 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AM442_RS13020 PF13378 Enolase C-terminal domain-like AM442_RS13025 PF02426 Muconolactone delta-isomerase AM442_RS13030 PF00775 Dioxygenase AM442_RS13030 PF04444 Catechol dioxygenase N terminus AM442_RS13035 PF01144 Coenzyme A transferase AM442_RS13040 PF01144 Coenzyme A transferase AM442_RS13045 PF02803 Thiolase, C-terminal domain AM442_RS13045 PF00108 Thiolase, N-terminal domain AM442_RS13050 PF12146 Serine aminopeptidase, S33 AM442_RS13055 PF00171 Aldehyde dehydrogenase family AM442_RS13065 PF02727 Copper amine oxidase, N2 domain AM442_RS13065 PF07833 Copper amine oxidase N-terminal domain AM442_RS13065 PF01179 Copper amine oxidase, enzyme domain AM442_RS13065 PF02728 Copper amine oxidase, N3 domain AM442_RS13070 PF02311 AraC-like ligand binding domain AM442_RS13070 PF12833 Helix-turn-helix domain AM442_RS13075 PF01613 Flavin reductase like domain AM442_RS13080 PF00111 2Fe-2S iron-sulfur cluster binding domain AM442_RS13080 PF00175 Oxidoreductase NAD-binding domain AM442_RS13095 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AM442_RS13095 PF00355 Rieske [2Fe-2S] domain AM442_RS13110 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AM442_RS13115 PF01425 Amidase AM442_RS13125 PF07690 Major Facilitator Superfamily AM442_RS13135 PF00106 short chain dehydrogenase AM442_RS13150 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM442_RS13150 PF02770 Acyl-CoA dehydrogenase, middle domain AM442_RS13150 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM442_RS13155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM442_RS13155 PF03466 LysR substrate binding domain AM442_RS13160 PF09339 IclR helix-turn-helix domain AM442_RS13160 PF01614 Bacterial transcriptional regulator AM442_RS13165 PF00753 Metallo-beta-lactamase superfamily AM442_RS13175 PF04143 Sulphur transport AM442_RS13185 PF01011 PQQ enzyme repeat AM442_RS13185 PF13360 PQQ-like domain AM442_RS13190 PF04966 Carbohydrate-selective porin, OprB family AM442_RS13195 PF05048 Periplasmic copper-binding protein (NosD) AM442_RS13200 PF01487 Type I 3-dehydroquinase AM442_RS13205 PF00775 Dioxygenase AM442_RS13210 PF00775 Dioxygenase AM442_RS13210 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal AM442_RS13215 PF02627 Carboxymuconolactone decarboxylase family AM442_RS13220 PF07690 Major Facilitator Superfamily AM442_RS13225 PF00561 alpha/beta hydrolase fold AM442_RS13230 PF00206 Lyase AM442_RS13230 PF10397 Adenylosuccinate lyase C-terminus AM442_RS13235 PF00108 Thiolase, N-terminal domain AM442_RS13235 PF02803 Thiolase, C-terminal domain AM442_RS13240 PF01144 Coenzyme A transferase AM442_RS13245 PF01144 Coenzyme A transferase AM442_RS13250 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AM442_RS13255 PF04977 Septum formation initiator AM442_RS13260 PF04239 Protein of unknown function (DUF421) AM442_RS13265 PF03952 Enolase, N-terminal domain AM442_RS13265 PF00113 Enolase, C-terminal TIM barrel domain AM442_RS13270 PF00793 DAHP synthetase I family AM442_RS13275 PF00117 Glutamine amidotransferase class-I AM442_RS13275 PF06418 CTP synthase N-terminus AM442_RS13305 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM442_RS13305 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM442_RS13320 PF00793 DAHP synthetase I family AM442_RS13325 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AM442_RS13330 PF00004 ATPase family associated with various cellular activities (AAA) AM442_RS13330 PF02861 Clp amino terminal domain, pathogenicity island component AM442_RS13330 PF07724 AAA domain (Cdc48 subfamily) AM442_RS13330 PF10431 C-terminal, D2-small domain, of ClpB protein AM442_RS13330 PF17871 AAA lid domain AM442_RS13335 PF02617 ATP-dependent Clp protease adaptor protein ClpS AM442_RS13345 PF01118 Semialdehyde dehydrogenase, NAD binding domain AM442_RS13345 PF02774 Semialdehyde dehydrogenase, dimerisation domain AM442_RS13360 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AM442_RS13365 PF00291 Pyridoxal-phosphate dependent enzyme AM442_RS13365 PF00585 C-terminal regulatory domain of Threonine dehydratase AM442_RS13370 PF02254 TrkA-N domain AM442_RS13370 PF02080 TrkA-C domain AM442_RS13375 PF02386 Cation transport protein AM442_RS13380 PF02253 Phospholipase A1 AM442_RS13385 PF05193 Peptidase M16 inactive domain AM442_RS13385 PF00675 Insulinase (Peptidase family M16) AM442_RS13385 PF08367 Peptidase M16C associated AM442_RS13390 PF00593 TonB dependent receptor AM442_RS13390 PF07715 TonB-dependent Receptor Plug Domain AM442_RS13395 PF00294 pfkB family carbohydrate kinase AM442_RS13405 PF07290 Protein of unknown function (DUF1449) AM442_RS13425 PF01654 Cytochrome bd terminal oxidase subunit I AM442_RS13430 PF02322 Cytochrome bd terminal oxidase subunit II AM442_RS13435 PF08173 Membrane bound YbgT-like protein AM442_RS13450 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) AM442_RS13460 PF00448 SRP54-type protein, GTPase domain AM442_RS13460 PF02881 SRP54-type protein, helical bundle domain AM442_RS13485 PF00571 CBS domain AM442_RS13485 PF00478 IMP dehydrogenase / GMP reductase domain AM442_RS13490 PF00202 Aminotransferase class-III AM442_RS13495 PF00462 Glutaredoxin AM442_RS13505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM442_RS13505 PF03466 LysR substrate binding domain AM442_RS13510 PF00557 Metallopeptidase family M24 AM442_RS13515 PF05525 Branched-chain amino acid transport protein AM442_RS13540 PF02896 PEP-utilising enzyme, TIM barrel domain AM442_RS13540 PF05524 PEP-utilising enzyme, N-terminal AM442_RS13540 PF00391 PEP-utilising enzyme, mobile domain AM442_RS13540 PF00381 PTS HPr component phosphorylation site AM442_RS13540 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM442_RS13545 PF00294 pfkB family carbohydrate kinase AM442_RS13550 PF02378 Phosphotransferase system, EIIC AM442_RS13550 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM442_RS13615 PF00216 Bacterial DNA-binding protein AM442_RS13665 PF11985 Protein of unknown function (DUF3486) AM442_RS13670 PF03237 Terminase-like family AM442_RS13690 PF02086 D12 class N6 adenine-specific DNA methyltransferase AM442_RS13695 PF06074 Protein of unknown function (DUF935) AM442_RS13700 PF04233 Phage Mu protein F like protein AM442_RS13800 PF04865 Baseplate J-like protein AM442_RS13830 PF00990 Diguanylate cyclase, GGDEF domain AM442_RS13830 PF03707 Bacterial signalling protein N terminal repeat AM442_RS13830 PF00563 EAL domain AM442_RS13840 PF07995 Glucose / Sorbosone dehydrogenase AM442_RS13845 PF02586 SOS response associated peptidase (SRAP) AM442_RS13850 PF01740 STAS domain AM442_RS13850 PF00916 Sulfate permease family AM442_RS13855 PF00082 Subtilase family AM442_RS13855 PF05922 Peptidase inhibitor I9 AM442_RS13865 PF00324 Amino acid permease AM442_RS13870 PF00266 Aminotransferase class-V AM442_RS13875 PF01037 Lrp/AsnC ligand binding domain AM442_RS13905 PF13737 Transposase DDE domain AM442_RS13910 PF13419 Haloacid dehalogenase-like hydrolase AM442_RS13915 PF01479 S4 domain AM442_RS13920 PF00154 recA bacterial DNA recombination protein AM442_RS13925 PF02631 RecX family AM442_RS13940 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AM442_RS13940 PF00132 Bacterial transferase hexapeptide (six repeats) AM442_RS13945 PF07977 FabA-like domain AM442_RS13950 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AM442_RS13950 PF00132 Bacterial transferase hexapeptide (six repeats) AM442_RS13960 PF07244 Surface antigen variable number repeat AM442_RS13960 PF01103 Surface antigen AM442_RS13965 PF17820 PDZ domain AM442_RS13965 PF13180 PDZ domain AM442_RS13965 PF02163 Peptidase family M50 AM442_RS13970 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AM442_RS13970 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AM442_RS13970 PF13288 DXP reductoisomerase C-terminal domain AM442_RS13980 PF01255 Putative undecaprenyl diphosphate synthase AM442_RS13985 PF01765 Ribosome recycling factor AM442_RS13990 PF00696 Amino acid kinase family AM442_RS13995 PF00919 Uncharacterized protein family UPF0004 AM442_RS13995 PF04055 Radical SAM superfamily AM442_RS13995 PF18693 TRAM domain AM442_RS14005 PF00989 PAS fold AM442_RS14005 PF00512 His Kinase A (phospho-acceptor) domain AM442_RS14005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM442_RS14010 PF02954 Bacterial regulatory protein, Fis family AM442_RS14010 PF00072 Response regulator receiver domain AM442_RS14010 PF00158 Sigma-54 interaction domain AM442_RS14015 PF00440 Bacterial regulatory proteins, tetR family AM442_RS14020 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AM442_RS14020 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AM442_RS14030 PF02542 YgbB family AM442_RS14040 PF01266 FAD dependent oxidoreductase AM442_RS14065 PF00206 Lyase AM442_RS14065 PF10415 Fumarase C C-terminus AM442_RS14070 PF16363 GDP-mannose 4,6 dehydratase AM442_RS14075 PF02635 DsrE/DsrF-like family AM442_RS14095 PF00892 EamA-like transporter family AM442_RS14100 PF00155 Aminotransferase class I and II AM442_RS14100 PF00392 Bacterial regulatory proteins, gntR family AM442_RS14105 PF01638 HxlR-like helix-turn-helix AM442_RS14110 PF03453 MoeA N-terminal region (domain I and II) AM442_RS14110 PF03454 MoeA C-terminal region (domain IV) AM442_RS14110 PF00994 Probable molybdopterin binding domain AM442_RS14115 PF01967 MoaC family AM442_RS14115 PF00994 Probable molybdopterin binding domain AM442_RS14120 PF02391 MoaE protein AM442_RS14130 PF04055 Radical SAM superfamily AM442_RS14130 PF06463 Molybdenum Cofactor Synthesis C AM442_RS14135 PF00384 Molybdopterin oxidoreductase AM442_RS14135 PF01568 Molydopterin dinucleotide binding domain AM442_RS14135 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM442_RS14140 PF12804 MobA-like NTP transferase domain AM442_RS14145 PF00384 Molybdopterin oxidoreductase AM442_RS14145 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM442_RS14145 PF04324 BFD-like [2Fe-2S] binding domain AM442_RS14145 PF01568 Molydopterin dinucleotide binding domain AM442_RS14150 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AM442_RS14150 PF04324 BFD-like [2Fe-2S] binding domain AM442_RS14150 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM442_RS14150 PF18267 Rubredoxin NAD+ reductase C-terminal domain AM442_RS14150 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AM442_RS14155 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AM442_RS14155 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM442_RS14155 PF13806 Rieske-like [2Fe-2S] domain AM442_RS14155 PF18267 Rubredoxin NAD+ reductase C-terminal domain AM442_RS14155 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AM442_RS14155 PF04324 BFD-like [2Fe-2S] binding domain AM442_RS14165 PF00072 Response regulator receiver domain AM442_RS14165 PF00486 Transcriptional regulatory protein, C terminal AM442_RS14170 PF00005 ABC transporter AM442_RS14175 PF11799 impB/mucB/samB family C-terminal domain AM442_RS14175 PF00817 impB/mucB/samB family AM442_RS14175 PF13438 Domain of unknown function (DUF4113) AM442_RS14180 PF01220 Dehydroquinase class II AM442_RS14185 PF00364 Biotin-requiring enzyme AM442_RS14190 PF00289 Biotin carboxylase, N-terminal domain AM442_RS14190 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM442_RS14190 PF02785 Biotin carboxylase C-terminal domain AM442_RS14205 PF12832 MFS_1 like family AM442_RS14235 PF01645 Conserved region in glutamate synthase AM442_RS14250 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AM442_RS14250 PF01565 FAD binding domain AM442_RS14255 PF01451 Low molecular weight phosphotyrosine protein phosphatase AM442_RS14265 PF00465 Iron-containing alcohol dehydrogenase AM442_RS14270 PF03061 Thioesterase superfamily AM442_RS14275 PF04185 Phosphoesterase family AM442_RS14275 PF05506 Domain of unknown function (DUF756) AM442_RS14280 PF12169 DNA polymerase III subunits gamma and tau domain III AM442_RS14280 PF12170 DNA polymerase III tau subunit V interacting with alpha AM442_RS14280 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AM442_RS14285 PF07690 Major Facilitator Superfamily AM442_RS14295 PF00144 Beta-lactamase AM442_RS14305 PF01575 MaoC like domain AM442_RS14315 PF02803 Thiolase, C-terminal domain AM442_RS14315 PF00108 Thiolase, N-terminal domain AM442_RS14325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM442_RS14325 PF03466 LysR substrate binding domain AM442_RS14330 PF00923 Transaldolase/Fructose-6-phosphate aldolase AM442_RS14335 PF01810 LysE type translocator AM442_RS14340 PF01037 Lrp/AsnC ligand binding domain AM442_RS14345 PF03594 Benzoate membrane transport protein AM442_RS14350 PF02308 MgtC family AM442_RS14355 PF00690 Cation transporter/ATPase, N-terminus AM442_RS14355 PF00689 Cation transporting ATPase, C-terminus AM442_RS14375 PF00582 Universal stress protein family AM442_RS14380 PF12848 ABC transporter AM442_RS14380 PF00005 ABC transporter AM442_RS14405 PF07715 TonB-dependent Receptor Plug Domain AM442_RS14405 PF00593 TonB dependent receptor AM442_RS14440 PF00924 Mechanosensitive ion channel AM442_RS14445 PF07715 TonB-dependent Receptor Plug Domain AM442_RS14445 PF00593 TonB dependent receptor AM442_RS14450 PF00440 Bacterial regulatory proteins, tetR family AM442_RS14465 PF01037 Lrp/AsnC ligand binding domain AM442_RS14470 PF01817 Chorismate mutase type II AM442_RS14490 PF11940 Domain of unknown function (DUF3458) Ig-like fold AM442_RS14490 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AM442_RS14490 PF01433 Peptidase family M1 domain AM442_RS14505 PF02110 Hydroxyethylthiazole kinase family AM442_RS14515 PF14493 Helix-turn-helix domain AM442_RS14515 PF05970 PIF1-like helicase AM442_RS14520 PF00465 Iron-containing alcohol dehydrogenase AM442_RS14535 PF00171 Aldehyde dehydrogenase family AM442_RS14540 PF13520 Amino acid permease AM442_RS14545 PF06751 Ethanolamine ammonia lyase large subunit (EutB) AM442_RS14550 PF05985 Ethanolamine ammonia-lyase light chain (EutC) AM442_RS14555 PF02540 NAD synthase AM442_RS14555 PF00958 GMP synthase C terminal domain AM442_RS14555 PF00117 Glutamine amidotransferase class-I AM442_RS14560 PF00749 tRNA synthetases class I (E and Q), catalytic domain AM442_RS14560 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AM442_RS14565 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AM442_RS14570 PF00149 Calcineurin-like phosphoesterase AM442_RS14580 PF00881 Nitroreductase family AM442_RS14590 PF17209 Hfq protein AM442_RS14600 PF01119 DNA mismatch repair protein, C-terminal domain AM442_RS14600 PF08676 MutL C terminal dimerisation domain AM442_RS14605 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AM442_RS14610 PF01479 S4 domain AM442_RS14610 PF00849 RNA pseudouridylate synthase AM442_RS14625 PF00849 RNA pseudouridylate synthase AM442_RS14625 PF01479 S4 domain AM442_RS14635 PF04284 Protein of unknown function (DUF441) AM442_RS14640 PF03466 LysR substrate binding domain AM442_RS14640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM442_RS14655 PF07690 Major Facilitator Superfamily AM442_RS14660 PF00520 Ion transport protein AM442_RS14660 PF00027 Cyclic nucleotide-binding domain AM442_RS14675 PF06434 Aconitate hydratase 2 N-terminus AM442_RS14675 PF00330 Aconitase family (aconitate hydratase) AM442_RS14675 PF11791 Aconitate B N-terminal domain AM442_RS14690 PF00717 Peptidase S24-like AM442_RS14695 PF00817 impB/mucB/samB family AM442_RS14695 PF11799 impB/mucB/samB family C-terminal domain AM442_RS14695 PF13438 Domain of unknown function (DUF4113) AM442_RS14695 PF11798 IMS family HHH motif AM442_RS14800 PF02768 DNA polymerase III beta subunit, C-terminal domain AM442_RS14800 PF02767 DNA polymerase III beta subunit, central domain AM442_RS14800 PF00712 DNA polymerase III beta subunit, N-terminal domain AM442_RS14840 PF05016 ParE toxin of type II toxin-antitoxin system, parDE AM442_RS15035 PF01695 IstB-like ATP binding protein AM442_RS15045 PF00145 C-5 cytosine-specific DNA methylase AM442_RS15130 PF00929 Exonuclease AM442_RS15170 PF07244 Surface antigen variable number repeat AM442_RS15170 PF17243 POTRA domain TamA domain 1 AM442_RS15170 PF01103 Surface antigen AM442_RS15175 PF07690 Major Facilitator Superfamily AM442_RS15180 PF03232 Ubiquinone biosynthesis protein COQ7 AM442_RS15190 PF00120 Glutamine synthetase, catalytic domain AM442_RS15195 PF00072 Response regulator receiver domain AM442_RS15195 PF00486 Transcriptional regulatory protein, C terminal AM442_RS15200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM442_RS15200 PF00512 His Kinase A (phospho-acceptor) domain AM442_RS15200 PF02702 Osmosensitive K+ channel His kinase sensor domain AM442_RS15200 PF13493 Domain of unknown function (DUF4118) AM442_RS15205 PF02669 K+-transporting ATPase, c chain AM442_RS15215 PF03814 Potassium-transporting ATPase A subunit AM442_RS15230 PF03109 ABC1 family AM442_RS15235 PF00899 ThiF family AM442_RS15240 PF01613 Flavin reductase like domain AM442_RS15245 PF13193 AMP-binding enzyme C-terminal domain AM442_RS15245 PF00501 AMP-binding enzyme AM442_RS15250 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM442_RS15250 PF02770 Acyl-CoA dehydrogenase, middle domain AM442_RS15250 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM442_RS15255 PF00106 short chain dehydrogenase AM442_RS15260 PF12833 Helix-turn-helix domain AM442_RS15265 PF13847 Methyltransferase domain AM442_RS15265 PF17827 PrmC N-terminal domain AM442_RS15270 PF00472 RF-1 domain AM442_RS15270 PF03462 PCRF domain AM442_RS15280 PF03466 LysR substrate binding domain AM442_RS15280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM442_RS15300 PF00296 Luciferase-like monooxygenase AM442_RS15310 PF13994 PgaD-like protein AM442_RS15315 PF00535 Glycosyl transferase family 2 AM442_RS15320 PF14883 Hypothetical glycosyl hydrolase family 13 AM442_RS15320 PF01522 Polysaccharide deacetylase AM442_RS15335 PF03618 Kinase/pyrophosphorylase AM442_RS15340 PF00391 PEP-utilising enzyme, mobile domain AM442_RS15340 PF02896 PEP-utilising enzyme, TIM barrel domain AM442_RS15340 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AM442_RS15350 PF06481 COX Aromatic Rich Motif AM442_RS15350 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AM442_RS15355 PF00115 Cytochrome C and Quinol oxidase polypeptide I AM442_RS15360 PF00510 Cytochrome c oxidase subunit III AM442_RS15365 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AM442_RS15370 PF01040 UbiA prenyltransferase family AM442_RS15375 PF01250 Ribosomal protein S6 AM442_RS15380 PF01084 Ribosomal protein S18 AM442_RS15385 PF03948 Ribosomal protein L9, C-terminal domain AM442_RS15385 PF01281 Ribosomal protein L9, N-terminal domain AM442_RS15390 PF00772 DnaB-like helicase N terminal domain AM442_RS15390 PF03796 DnaB-like helicase C terminal domain AM442_RS15395 PF01168 Alanine racemase, N-terminal domain AM442_RS15395 PF00842 Alanine racemase, C-terminal domain AM442_RS15405 PF08379 Bacterial transglutaminase-like N-terminal region AM442_RS15405 PF01841 Transglutaminase-like superfamily AM442_RS15415 PF14403 Circularly permuted ATP-grasp type 2 AM442_RS15430 PF01134 Glucose inhibited division protein A AM442_RS15430 PF13932 GidA associated domain AM442_RS15450 PF02954 Bacterial regulatory protein, Fis family AM442_RS15455 PF01808 AICARFT/IMPCHase bienzyme AM442_RS15455 PF02142 MGS-like domain AM442_RS15460 PF02843 Phosphoribosylglycinamide synthetase, C domain AM442_RS15460 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AM442_RS15460 PF02844 Phosphoribosylglycinamide synthetase, N domain AM442_RS15465 PF03180 NLPA lipoprotein AM442_RS15470 PF09383 NIL domain AM442_RS15470 PF00005 ABC transporter AM442_RS15475 PF00528 Binding-protein-dependent transport system inner membrane component AM442_RS15480 PF16123 Hydroxyacylglutathione hydrolase C-terminus AM442_RS15480 PF00753 Metallo-beta-lactamase superfamily AM442_RS15490 PF00375 Sodium:dicarboxylate symporter family AM442_RS15510 PF07995 Glucose / Sorbosone dehydrogenase AM442_RS15515 PF00892 EamA-like transporter family AM442_RS15520 PF01177 Asp/Glu/Hydantoin racemase AM442_RS15530 PF02470 MlaD protein AM442_RS15535 PF04403 Paraquat-inducible protein A AM442_RS15545 PF06826 Predicted Permease Membrane Region AM442_RS15545 PF02080 TrkA-C domain AM442_RS15550 PF00155 Aminotransferase class I and II AM442_RS15555 PF13737 Transposase DDE domain AM442_RS15580 PF08946 Osmosensory transporter coiled coil AM442_RS15580 PF00083 Sugar (and other) transporter AM442_RS15615 PF13737 Transposase DDE domain AM442_RS15620 PF13737 Transposase DDE domain AM442_RS15635 PF07729 FCD domain AM442_RS15635 PF00392 Bacterial regulatory proteins, gntR family AM442_RS15645 PF03616 Sodium/glutamate symporter AM442_RS15650 PF00561 alpha/beta hydrolase fold AM442_RS15675 PF04076 Bacterial OB fold (BOF) protein AM442_RS15710 PF00324 Amino acid permease AM442_RS15715 PF00171 Aldehyde dehydrogenase family AM442_RS15720 PF00202 Aminotransferase class-III AM442_RS15725 PF03466 LysR substrate binding domain AM442_RS15725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM442_RS15765 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AM442_RS15765 PF08479 POTRA domain, ShlB-type AM442_RS15765 PF17287 POTRA domain AM442_RS15790 PF00069 Protein kinase domain AM442_RS15810 PF00814 Glycoprotease family AM442_RS15815 PF01165 Ribosomal protein S21 AM442_RS15820 PF09424 Yqey-like protein AM442_RS15825 PF01435 Peptidase family M48 AM442_RS15830 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM442_RS15830 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM442_RS15845 PF00156 Phosphoribosyl transferase domain AM442_RS15850 PF02674 Colicin V production protein AM442_RS15855 PF01180 Dihydroorotate dehydrogenase AM442_RS15875 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AM442_RS15875 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AM442_RS15880 PF00881 Nitroreductase family AM442_RS15890 PF00271 Helicase conserved C-terminal domain AM442_RS15890 PF00270 DEAD/DEAH box helicase AM442_RS15895 PF00313 'Cold-shock' DNA-binding domain AM442_RS15905 PF04545 Sigma-70, region 4 AM442_RS15905 PF04542 Sigma-70 region 2 AM442_RS15905 PF00140 Sigma-70 factor, region 1.2 AM442_RS15910 PF04241 Protein of unknown function (DUF423) AM442_RS15920 PF05690 Thiazole biosynthesis protein ThiG AM442_RS15930 PF03883 Peroxide stress protein YaaA AM442_RS15940 PF00753 Metallo-beta-lactamase superfamily AM442_RS15945 PF07687 Peptidase dimerisation domain AM442_RS15945 PF01546 Peptidase family M20/M25/M40 AM442_RS15955 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AM442_RS15960 PF01817 Chorismate mutase type II AM442_RS15960 PF01842 ACT domain AM442_RS15960 PF00800 Prephenate dehydratase AM442_RS15965 PF00756 Putative esterase AM442_RS15970 PF02770 Acyl-CoA dehydrogenase, middle domain AM442_RS15970 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM442_RS15970 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM442_RS15975 PF00375 Sodium:dicarboxylate symporter family AM442_RS15985 PF00591 Glycosyl transferase family, a/b domain AM442_RS15985 PF02885 Glycosyl transferase family, helical bundle domain AM442_RS15990 PF07023 Protein of unknown function (DUF1315) AM442_RS15995 PF01513 ATP-NAD kinase AM442_RS16000 PF14814 Bifunctional transglycosylase second domain AM442_RS16000 PF00905 Penicillin binding protein transpeptidase domain AM442_RS16000 PF00912 Transglycosylase AM442_RS16010 PF00293 NUDIX domain AM442_RS16020 PF08521 Two-component sensor kinase N-terminal AM442_RS16020 PF00512 His Kinase A (phospho-acceptor) domain AM442_RS16020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM442_RS16025 PF00486 Transcriptional regulatory protein, C terminal AM442_RS16025 PF00072 Response regulator receiver domain AM442_RS16035 PF00437 Type II/IV secretion system protein AM442_RS16035 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AM442_RS16045 PF18389 TrmO C-terminal domain AM442_RS16045 PF01980 tRNA-methyltransferase O AM442_RS16050 PF00970 Oxidoreductase FAD-binding domain AM442_RS16050 PF00175 Oxidoreductase NAD-binding domain AM442_RS16055 PF02567 Phenazine biosynthesis-like protein AM442_RS16060 PF00392 Bacterial regulatory proteins, gntR family AM442_RS16060 PF00155 Aminotransferase class I and II AM442_RS16065 PF01136 Peptidase family U32 AM442_RS16065 PF16325 Peptidase family U32 C-terminal domain AM442_RS16070 PF00037 4Fe-4S binding domain AM442_RS16075 PF00893 Small Multidrug Resistance protein AM442_RS16080 PF00005 ABC transporter AM442_RS16085 PF00528 Binding-protein-dependent transport system inner membrane component AM442_RS16090 PF00528 Binding-protein-dependent transport system inner membrane component AM442_RS16095 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM442_RS16105 PF13533 Biotin-lipoyl like AM442_RS16110 PF00873 AcrB/AcrD/AcrF family AM442_RS16120 PF00464 Serine hydroxymethyltransferase AM442_RS16195 PF07927 HicA toxin of bacterial toxin-antitoxin, AM442_RS16200 PF01381 Helix-turn-helix AM442_RS16200 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system AM442_RS16265 PF00574 Clp protease AM442_RS16275 PF04860 Phage portal protein AM442_RS16380 PF01555 DNA methylase AM442_RS16385 PF14528 LAGLIDADG-like domain AM442_RS16385 PF03796 DnaB-like helicase C terminal domain AM442_RS16385 PF00772 DnaB-like helicase N terminal domain AM442_RS16490 PF00005 ABC transporter AM442_RS16495 PF01061 ABC-2 type transporter AM442_RS16500 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AM442_RS16500 PF14489 QueF-like protein AM442_RS16510 PF01098 Cell cycle protein AM442_RS16515 PF13406 Transglycosylase SLT domain AM442_RS16520 PF03330 Lytic transglycolase AM442_RS16520 PF05036 Sporulation related domain AM442_RS16540 PF12833 Helix-turn-helix domain AM442_RS16550 PF00889 Elongation factor TS AM442_RS16555 PF00318 Ribosomal protein S2 AM442_RS16560 PF00557 Metallopeptidase family M24 AM442_RS16570 PF07690 Major Facilitator Superfamily AM442_RS16580 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM442_RS16580 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM442_RS16585 PF04055 Radical SAM superfamily AM442_RS16590 PF09317 Domain of unknown function (DUF1974) AM442_RS16590 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM442_RS16590 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM442_RS16605 PF05221 S-adenosyl-L-homocysteine hydrolase AM442_RS16605 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AM442_RS16610 PF02219 Methylenetetrahydrofolate reductase AM442_RS16615 PF04452 RNA methyltransferase AM442_RS16630 PF03707 Bacterial signalling protein N terminal repeat AM442_RS16630 PF00990 Diguanylate cyclase, GGDEF domain AM442_RS16630 PF00563 EAL domain AM442_RS16635 PF03949 Malic enzyme, NAD binding domain AM442_RS16635 PF01515 Phosphate acetyl/butaryl transferase AM442_RS16635 PF00390 Malic enzyme, N-terminal domain AM442_RS16640 PF12627 Probable RNA and SrmB- binding site of polymerase A AM442_RS16640 PF01743 Poly A polymerase head domain AM442_RS16645 PF13180 PDZ domain AM442_RS16650 PF01784 NIF3 (NGG1p interacting factor 3) AM442_RS16655 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AM442_RS16655 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AM442_RS16690 PF01040 UbiA prenyltransferase family AM442_RS16695 PF04345 Chorismate lyase AM442_RS16700 PF03951 Glutamine synthetase, beta-Grasp domain AM442_RS16700 PF00120 Glutamine synthetase, catalytic domain AM442_RS16705 PF00854 POT family AM442_RS16715 PF00117 Glutamine amidotransferase class-I AM442_RS16720 PF11838 ERAP1-like C-terminal domain AM442_RS16720 PF01433 Peptidase family M1 domain AM442_RS16725 PF07715 TonB-dependent Receptor Plug Domain AM442_RS16725 PF00593 TonB dependent receptor AM442_RS16730 PF02885 Glycosyl transferase family, helical bundle domain AM442_RS16730 PF00591 Glycosyl transferase family, a/b domain AM442_RS16735 PF00218 Indole-3-glycerol phosphate synthase AM442_RS16750 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AM442_RS16750 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AM442_RS16755 PF00111 2Fe-2S iron-sulfur cluster binding domain AM442_RS16755 PF01799 [2Fe-2S] binding domain AM442_RS16760 PF01227 GTP cyclohydrolase I AM442_RS16770 PF00144 Beta-lactamase AM442_RS16785 PF05675 Protein of unknown function (DUF817) AM442_RS16790 PF01208 Uroporphyrinogen decarboxylase (URO-D) AM442_RS16800 PF00425 chorismate binding enzyme AM442_RS16810 PF00975 Thioesterase domain AM442_RS16815 PF00005 ABC transporter AM442_RS16820 PF00005 ABC transporter AM442_RS16830 PF00282 Pyridoxal-dependent decarboxylase conserved domain AM442_RS16835 PF00857 Isochorismatase family AM442_RS16835 PF00550 Phosphopantetheine attachment site AM442_RS16840 PF00501 AMP-binding enzyme AM442_RS16840 PF13193 AMP-binding enzyme C-terminal domain AM442_RS16845 PF00501 AMP-binding enzyme AM442_RS16845 PF00668 Condensation domain AM442_RS16845 PF00550 Phosphopantetheine attachment site AM442_RS16850 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AM442_RS16855 PF07715 TonB-dependent Receptor Plug Domain AM442_RS16855 PF00593 TonB dependent receptor AM442_RS16860 PF01497 Periplasmic binding protein AM442_RS16865 PF00005 ABC transporter AM442_RS16870 PF01032 FecCD transport family AM442_RS16875 PF01032 FecCD transport family AM442_RS16880 PF00501 AMP-binding enzyme AM442_RS16880 PF00975 Thioesterase domain AM442_RS16880 PF13193 AMP-binding enzyme C-terminal domain AM442_RS16880 PF00550 Phosphopantetheine attachment site AM442_RS16880 PF00668 Condensation domain AM442_RS16885 PF13193 AMP-binding enzyme C-terminal domain AM442_RS16885 PF00501 AMP-binding enzyme AM442_RS16885 PF00550 Phosphopantetheine attachment site AM442_RS16885 PF00668 Condensation domain AM442_RS16895 PF13309 HTH domain AM442_RS16895 PF08348 YheO-like PAS domain AM442_RS16900 PF00291 Pyridoxal-phosphate dependent enzyme AM442_RS16905 PF02678 Pirin AM442_RS16905 PF17954 Quercetinase C-terminal cupin domain AM442_RS16930 PF04328 Selenoprotein, putative AM442_RS16935 PF13722 5TM C-terminal transporter carbon starvation CstA AM442_RS16935 PF02554 Carbon starvation protein CstA AM442_RS16940 PF08207 Elongation factor P (EF-P) KOW-like domain AM442_RS16940 PF01132 Elongation factor P (EF-P) OB domain AM442_RS16940 PF09285 Elongation factor P, C-terminal AM442_RS16945 PF04055 Radical SAM superfamily AM442_RS16955 PF00563 EAL domain AM442_RS16955 PF12792 CSS motif domain associated with EAL AM442_RS16960 PF01197 Ribosomal protein L31 AM442_RS16965 PF13593 SBF-like CPA transporter family (DUF4137) AM442_RS16970 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM442_RS16975 PF07690 Major Facilitator Superfamily AM442_RS16980 PF13654 AAA domain AM442_RS16980 PF05362 Lon protease (S16) C-terminal proteolytic domain AM442_RS16985 PF03466 LysR substrate binding domain AM442_RS16985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM442_RS16990 PF01476 LysM domain AM442_RS16990 PF01551 Peptidase family M23 AM442_RS16995 PF01975 Survival protein SurE AM442_RS17010 PF00768 D-alanyl-D-alanine carboxypeptidase AM442_RS17010 PF07943 Penicillin-binding protein 5, C-terminal domain AM442_RS17015 PF00132 Bacterial transferase hexapeptide (six repeats) AM442_RS17020 PF00293 NUDIX domain AM442_RS17020 PF13344 Haloacid dehalogenase-like hydrolase AM442_RS17030 PF04356 Protein of unknown function (DUF489) AM442_RS17035 PF00206 Lyase AM442_RS17035 PF08328 Adenylosuccinate lyase C-terminal AM442_RS17055 PF01343 Peptidase family S49 AM442_RS17055 PF08496 Peptidase family S49 N-terminal AM442_RS17060 PF00005 ABC transporter AM442_RS17065 PF00528 Binding-protein-dependent transport system inner membrane component AM442_RS17070 PF00528 Binding-protein-dependent transport system inner membrane component AM442_RS17075 PF12849 PBP superfamily domain AM442_RS17080 PF00324 Amino acid permease AM442_RS17085 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM442_RS17085 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM442_RS17085 PF00205 Thiamine pyrophosphate enzyme, central domain AM442_RS17090 PF01037 Lrp/AsnC ligand binding domain AM442_RS17095 PF00171 Aldehyde dehydrogenase family AM442_RS17100 PF00282 Pyridoxal-dependent decarboxylase conserved domain AM442_RS17105 PF00202 Aminotransferase class-III AM442_RS17115 PF17754 MftR C-terminal domain AM442_RS17115 PF00440 Bacterial regulatory proteins, tetR family AM442_RS17125 PF00487 Fatty acid desaturase AM442_RS17130 PF00175 Oxidoreductase NAD-binding domain AM442_RS17130 PF00111 2Fe-2S iron-sulfur cluster binding domain AM442_RS17130 PF00970 Oxidoreductase FAD-binding domain AM442_RS17135 PF00440 Bacterial regulatory proteins, tetR family AM442_RS17145 PF18339 RapA N-terminal Tudor like domain 1 AM442_RS17145 PF00176 SNF2 family N-terminal domain AM442_RS17145 PF12137 RNA polymerase recycling family C-terminal AM442_RS17145 PF00271 Helicase conserved C-terminal domain AM442_RS17145 PF18337 RapA N-terminal Tudor like domain AM442_RS17150 PF00849 RNA pseudouridylate synthase AM442_RS17160 PF00202 Aminotransferase class-III AM442_RS17165 PF02581 Thiamine monophosphate synthase AM442_RS17190 PF05193 Peptidase M16 inactive domain AM442_RS17190 PF00675 Insulinase (Peptidase family M16) AM442_RS17195 PF02567 Phenazine biosynthesis-like protein AM442_RS17200 PF00375 Sodium:dicarboxylate symporter family AM442_RS17205 PF03466 LysR substrate binding domain AM442_RS17205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM442_RS17210 PF06779 Uncharacterised MFS-type transporter YbfB AM442_RS17230 PF00180 Isocitrate/isopropylmalate dehydrogenase AM442_RS17235 PF00849 RNA pseudouridylate synthase AM442_RS17240 PF03971 Monomeric isocitrate dehydrogenase AM442_RS17265 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM442_RS17270 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM442_RS17275 PF00875 DNA photolyase AM442_RS17275 PF03441 FAD binding domain of DNA photolyase AM442_RS17305 PF02350 UDP-N-acetylglucosamine 2-epimerase AM442_RS17320 PF03060 Nitronate monooxygenase AM442_RS17325 PF01207 Dihydrouridine synthase (Dus) AM442_RS17330 PF07759 Protein of unknown function (DUF1615) AM442_RS17340 PF01472 PUA domain AM442_RS17340 PF00696 Amino acid kinase family AM442_RS17345 PF01926 50S ribosome-binding GTPase AM442_RS17345 PF01018 GTP1/OBG AM442_RS17360 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AM442_RS17360 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AM442_RS17365 PF00892 EamA-like transporter family AM442_RS17375 PF17757 UvrB interaction domain AM442_RS17375 PF04851 Type III restriction enzyme, res subunit AM442_RS17375 PF02151 UvrB/uvrC motif AM442_RS17375 PF00271 Helicase conserved C-terminal domain AM442_RS17375 PF12344 Ultra-violet resistance protein B AM442_RS17385 PF00990 Diguanylate cyclase, GGDEF domain AM442_RS17385 PF17151 Periplasmic sensor domain AM442_RS17395 PF00155 Aminotransferase class I and II AM442_RS17425 PF00106 short chain dehydrogenase AM442_RS17430 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) AM442_RS17435 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AM442_RS17440 PF02565 Recombination protein O C terminal AM442_RS17440 PF11967 Recombination protein O N terminal AM442_RS17450 PF07650 KH domain AM442_RS17450 PF01926 50S ribosome-binding GTPase AM442_RS17455 PF14622 Ribonuclease-III-like AM442_RS17455 PF00035 Double-stranded RNA binding motif AM442_RS17465 PF10502 Signal peptidase, peptidase S26 AM442_RS17470 PF06421 GTP-binding protein LepA C-terminus AM442_RS17470 PF03144 Elongation factor Tu domain 2 AM442_RS17470 PF00009 Elongation factor Tu GTP binding domain AM442_RS17470 PF00679 Elongation factor G C-terminus AM442_RS17480 PF13180 PDZ domain AM442_RS17485 PF00890 FAD binding domain AM442_RS17485 PF02910 Fumarate reductase flavoprotein C-term AM442_RS17495 PF02223 Thymidylate kinase AM442_RS17500 PF02618 YceG-like family AM442_RS17505 PF01063 Amino-transferase class IV AM442_RS17520 PF00528 Binding-protein-dependent transport system inner membrane component AM442_RS17525 PF00528 Binding-protein-dependent transport system inner membrane component AM442_RS17530 PF00005 ABC transporter AM442_RS17530 PF12857 TOBE-like domain AM442_RS17535 PF03466 LysR substrate binding domain AM442_RS17535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM442_RS17545 PF00132 Bacterial transferase hexapeptide (six repeats) AM442_RS17545 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AM442_RS17545 PF14602 Hexapeptide repeat of succinyl-transferase AM442_RS17555 PF06508 Queuosine biosynthesis protein QueC AM442_RS17570 PF00578 AhpC/TSA family AM442_RS17580 PF01467 Cytidylyltransferase-like AM442_RS17580 PF00293 NUDIX domain AM442_RS17585 PF00378 Enoyl-CoA hydratase/isomerase AM442_RS17590 PF01784 NIF3 (NGG1p interacting factor 3) AM442_RS17595 PF07690 Major Facilitator Superfamily AM442_RS17600 PF02769 AIR synthase related protein, C-terminal domain AM442_RS17600 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AM442_RS17600 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AM442_RS17605 PF01966 HD domain AM442_RS17610 PF07499 RuvA, C-terminal domain AM442_RS17610 PF01330 RuvA N terminal domain AM442_RS17615 PF17864 RuvB AAA lid domain AM442_RS17615 PF05496 Holliday junction DNA helicase RuvB P-loop domain AM442_RS17615 PF05491 RuvB C-terminal winged helix domain AM442_RS17620 PF01546 Peptidase family M20/M25/M40 AM442_RS17620 PF07687 Peptidase dimerisation domain AM442_RS17625 PF03061 Thioesterase superfamily AM442_RS17630 PF01618 MotA/TolQ/ExbB proton channel family AM442_RS17635 PF02472 Biopolymer transport protein ExbD/TolR AM442_RS17645 PF07676 WD40-like Beta Propeller Repeat AM442_RS17645 PF04052 TolB amino-terminal domain AM442_RS17650 PF00691 OmpA family AM442_RS17660 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AM442_RS17665 PF08032 RNA 2'-O ribose methyltransferase substrate binding AM442_RS17665 PF00588 SpoU rRNA Methylase family AM442_RS17695 PF11638 DnaA N-terminal domain AM442_RS17695 PF08299 Bacterial dnaA protein helix-turn-helix AM442_RS17695 PF00308 Bacterial dnaA protein AM442_RS17700 PF01594 AI-2E family transporter AM442_RS17705 PF00586 AIR synthase related protein, N-terminal domain AM442_RS17705 PF02769 AIR synthase related protein, C-terminal domain AM442_RS17710 PF00551 Formyl transferase AM442_RS17715 PF12697 Alpha/beta hydrolase family AM442_RS17720 PF06965 Na+/H+ antiporter 1 AM442_RS17720 PF01343 Peptidase family S49 AM442_RS17730 PF03772 Competence protein AM442_RS17730 PF00753 Metallo-beta-lactamase superfamily AM442_RS17730 PF13567 Domain of unknown function (DUF4131) AM442_RS17735 PF00005 ABC transporter AM442_RS17740 PF12704 MacB-like periplasmic core domain AM442_RS17740 PF02687 FtsX-like permease family AM442_RS17750 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AM442_RS17760 PF00266 Aminotransferase class-V AM442_RS17770 PF13533 Biotin-lipoyl like AM442_RS17815 PF00521 DNA gyrase/topoisomerase IV, subunit A AM442_RS17815 PF03989 DNA gyrase C-terminal domain, beta-propeller AM442_RS17820 PF01012 Electron transfer flavoprotein domain AM442_RS17820 PF00766 Electron transfer flavoprotein FAD-binding domain AM442_RS17825 PF01012 Electron transfer flavoprotein domain AM442_RS17830 PF00589 Phage integrase family AM442_RS17830 PF02899 Phage integrase, N-terminal SAM-like domain AM442_RS17835 PF01810 LysE type translocator AM442_RS17840 PF01678 Diaminopimelate epimerase AM442_RS17845 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AM442_RS17845 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AM442_RS17855 PF00324 Amino acid permease AM442_RS17860 PF18073 Rubredoxin metal binding domain AM442_RS17870 PF00152 tRNA synthetases class II (D, K and N) AM442_RS17875 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM442_RS17875 PF11890 Domain of unknown function (DUF3410) AM442_RS17875 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM442_RS17880 PF06803 Protein of unknown function (DUF1232) AM442_RS17885 PF02634 FdhD/NarQ family AM442_RS17890 PF00384 Molybdopterin oxidoreductase AM442_RS17895 PF02595 Glycerate kinase family AM442_RS17910 PF00881 Nitroreductase family AM442_RS17960 PF09857 Putative toxin of bacterial toxin-antitoxin pair AM442_RS17970 PF13193 AMP-binding enzyme C-terminal domain AM442_RS17970 PF00550 Phosphopantetheine attachment site AM442_RS17970 PF00501 AMP-binding enzyme AM442_RS17970 PF00668 Condensation domain AM442_RS17970 PF00975 Thioesterase domain AM442_RS17990 PF03449 Transcription elongation factor, N-terminal AM442_RS17990 PF01272 Transcription elongation factor, GreA/GreB, C-term AM442_RS17995 PF01464 Transglycosylase SLT domain AM442_RS17995 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM442_RS18005 PF01171 PP-loop family AM442_RS18015 PF01464 Transglycosylase SLT domain AM442_RS18020 PF01435 Peptidase family M48 AM442_RS18030 PF00873 AcrB/AcrD/AcrF family AM442_RS18035 PF03009 Glycerophosphoryl diester phosphodiesterase family AM442_RS18045 PF01219 Prokaryotic diacylglycerol kinase AM442_RS18050 PF00118 TCP-1/cpn60 chaperonin family AM442_RS18055 PF00166 Chaperonin 10 Kd subunit AM442_RS18070 PF00149 Calcineurin-like phosphoesterase AM442_RS18075 PF00781 Diacylglycerol kinase catalytic domain AM442_RS18080 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain AM442_RS18080 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain AM442_RS18085 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AM442_RS18085 PF01266 FAD dependent oxidoreductase AM442_RS18090 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM442_RS18090 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM442_RS18095 PF00083 Sugar (and other) transporter AM442_RS18110 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AM442_RS18110 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AM442_RS18125 PF16655 PhoD-like phosphatase, N-terminal domain AM442_RS18125 PF09423 PhoD-like phosphatase AM442_RS18145 PF00809 Pterin binding enzyme AM442_RS18150 PF01434 Peptidase family M41 AM442_RS18150 PF06480 FtsH Extracellular AM442_RS18150 PF00004 ATPase family associated with various cellular activities (AAA) AM442_RS18150 PF17862 AAA+ lid domain AM442_RS18155 PF01728 FtsJ-like methyltransferase AM442_RS18160 PF01985 CRS1 / YhbY (CRM) domain AM442_RS18180 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AM442_RS18180 PF00117 Glutamine amidotransferase class-I AM442_RS18185 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AM442_RS18185 PF02142 MGS-like domain AM442_RS18185 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM442_RS18190 PF01272 Transcription elongation factor, GreA/GreB, C-term AM442_RS18190 PF03449 Transcription elongation factor, N-terminal AM442_RS18195 PF00132 Bacterial transferase hexapeptide (six repeats) AM442_RS18200 PF00582 Universal stress protein family AM442_RS18205 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AM442_RS18215 PF09587 Bacterial capsule synthesis protein PGA_cap AM442_RS18230 PF00999 Sodium/hydrogen exchanger family AM442_RS18235 PF04228 Putative neutral zinc metallopeptidase AM442_RS18240 PF05661 Protein of unknown function (DUF808) AM442_RS18245 PF00579 tRNA synthetases class I (W and Y) AM442_RS18250 PF00549 CoA-ligase AM442_RS18250 PF02629 CoA binding domain AM442_RS18255 PF00549 CoA-ligase AM442_RS18255 PF08442 ATP-grasp domain AM442_RS18260 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM442_RS18260 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM442_RS18265 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AM442_RS18265 PF00364 Biotin-requiring enzyme AM442_RS18265 PF02817 e3 binding domain AM442_RS18270 PF02779 Transketolase, pyrimidine binding domain AM442_RS18270 PF16078 2-oxoglutarate dehydrogenase N-terminus AM442_RS18270 PF00676 Dehydrogenase E1 component AM442_RS18270 PF16870 2-oxoglutarate dehydrogenase C-terminal AM442_RS18285 PF13085 2Fe-2S iron-sulfur cluster binding domain AM442_RS18290 PF00890 FAD binding domain AM442_RS18290 PF02910 Fumarate reductase flavoprotein C-term AM442_RS18295 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AM442_RS18300 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AM442_RS18305 PF00285 Citrate synthase, C-terminal domain AM442_RS18315 PF17773 UPF0176 acylphosphatase like domain AM442_RS18315 PF00581 Rhodanese-like domain AM442_RS18330 PF00140 Sigma-70 factor, region 1.2 AM442_RS18330 PF04545 Sigma-70, region 4 AM442_RS18330 PF04542 Sigma-70 region 2 AM442_RS18330 PF03979 Sigma-70 factor, region 1.1 AM442_RS18330 PF04546 Sigma-70, non-essential region AM442_RS18330 PF04539 Sigma-70 region 3 AM442_RS18335 PF04359 Protein of unknown function (DUF493) AM442_RS18340 PF03099 Biotin/lipoate A/B protein ligase family AM442_RS18350 PF00465 Iron-containing alcohol dehydrogenase AM442_RS18370 PF03358 NADPH-dependent FMN reductase AM442_RS18375 PF01638 HxlR-like helix-turn-helix AM442_RS18380 PF00588 SpoU rRNA Methylase family AM442_RS18385 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM442_RS18385 PF14824 Sirohaem biosynthesis protein central AM442_RS18385 PF10414 Sirohaem synthase dimerisation region AM442_RS18390 PF02403 Seryl-tRNA synthetase N-terminal domain AM442_RS18390 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM442_RS18400 PF03548 Outer membrane lipoprotein carrier protein LolA AM442_RS18405 PF01016 Ribosomal L27 protein AM442_RS18410 PF00829 Ribosomal prokaryotic L21 protein AM442_RS18420 PF00348 Polyprenyl synthetase AM442_RS18425 PF01406 tRNA synthetases class I (C) catalytic domain AM442_RS18425 PF09190 DALR domain AM442_RS18430 PF01569 PAP2 superfamily AM442_RS18435 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM442_RS18435 PF00529 HlyD membrane-fusion protein of T1SS AM442_RS18440 PF00873 AcrB/AcrD/AcrF family AM442_RS18445 PF02321 Outer membrane efflux protein AM442_RS18450 PF01906 Putative heavy-metal-binding AM442_RS18455 PF01906 Putative heavy-metal-binding AM442_RS18475 PF10458 Valyl tRNA synthetase tRNA binding arm AM442_RS18475 PF00133 tRNA synthetases class I (I, L, M and V) AM442_RS18475 PF08264 Anticodon-binding domain of tRNA AM442_RS18495 PF03466 LysR substrate binding domain AM442_RS18495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM442_RS18505 PF00909 Ammonium Transporter Family AM442_RS18520 PF00512 His Kinase A (phospho-acceptor) domain AM442_RS18520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM442_RS18520 PF08521 Two-component sensor kinase N-terminal AM442_RS18525 PF00072 Response regulator receiver domain AM442_RS18525 PF00486 Transcriptional regulatory protein, C terminal AM442_RS18530 PF08019 Phosphoethanolamine transferase EptA/EptB AM442_RS18530 PF00884 Sulfatase AM442_RS18565 PF01734 Patatin-like phospholipase AM442_RS18575 PF01145 SPFH domain / Band 7 family AM442_RS18580 PF04237 YjbR AM442_RS18585 PF00348 Polyprenyl synthetase AM442_RS18590 PF04303 PrpF protein AM442_RS18595 PF00324 Amino acid permease AM442_RS18605 PF01965 DJ-1/PfpI family AM442_RS18610 PF00698 Acyl transferase domain AM442_RS18610 PF08990 Erythronolide synthase docking AM442_RS18610 PF09277 Erythronolide synthase, docking AM442_RS18610 PF08240 Alcohol dehydrogenase GroES-like domain AM442_RS18610 PF02801 Beta-ketoacyl synthase, C-terminal domain AM442_RS18610 PF08659 KR domain AM442_RS18610 PF00550 Phosphopantetheine attachment site AM442_RS18610 PF14765 Polyketide synthase dehydratase AM442_RS18610 PF16197 Ketoacyl-synthetase C-terminal extension AM442_RS18610 PF00109 Beta-ketoacyl synthase, N-terminal domain AM442_RS18615 PF06719 AraC-type transcriptional regulator N-terminus AM442_RS18615 PF12833 Helix-turn-helix domain AM442_RS18620 PF02673 Bacitracin resistance protein BacA AM442_RS18640 PF02525 Flavodoxin-like fold AM442_RS18655 PF01507 Phosphoadenosine phosphosulfate reductase family AM442_RS18660 PF06974 Protein of unknown function (DUF1298) AM442_RS18660 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain AM442_RS18670 PF00575 S1 RNA binding domain AM442_RS18670 PF10150 Ribonuclease E/G family AM442_RS18675 PF02545 Maf-like protein AM442_RS18680 PF04093 rod shape-determining protein MreD AM442_RS18685 PF04085 rod shape-determining protein MreC AM442_RS18695 PF02686 Glu-tRNAGln amidotransferase C subunit AM442_RS18700 PF01425 Amidase AM442_RS18705 PF02934 GatB/GatE catalytic domain AM442_RS18705 PF02637 GatB domain AM442_RS18730 PF01431 Peptidase family M13 AM442_RS18730 PF05649 Peptidase family M13 AM442_RS18735 PF05992 SbmA/BacA-like family AM442_RS18740 PF00291 Pyridoxal-phosphate dependent enzyme AM442_RS18740 PF13291 ACT domain AM442_RS18745 PF01734 Patatin-like phospholipase AM442_RS18750 PF01235 Sodium:alanine symporter family AM442_RS18765 PF00881 Nitroreductase family AM442_RS18770 PF07690 Major Facilitator Superfamily AM442_RS18775 PF12805 FUSC-like inner membrane protein yccS AM442_RS18785 PF00175 Oxidoreductase NAD-binding domain AM442_RS18785 PF00258 Flavodoxin AM442_RS18785 PF00667 FAD binding domain AM442_RS18825 PF17969 L,D-transpeptidase C-terminal domain AM442_RS18825 PF03734 L,D-transpeptidase catalytic domain AM442_RS18830 PF04304 Protein of unknown function (DUF454) AM442_RS18840 PF08085 Entericidin EcnA/B family AM442_RS18845 PF01546 Peptidase family M20/M25/M40 AM442_RS18845 PF07687 Peptidase dimerisation domain AM442_RS18855 PF01627 Hpt domain AM442_RS18855 PF01584 CheW-like domain AM442_RS18855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM442_RS18855 PF00072 Response regulator receiver domain AM442_RS18860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM442_RS18860 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AM442_RS18865 PF01584 CheW-like domain AM442_RS18870 PF00072 Response regulator receiver domain AM442_RS18875 PF00072 Response regulator receiver domain AM442_RS18890 PF00873 AcrB/AcrD/AcrF family AM442_RS18895 PF03129 Anticodon binding domain AM442_RS18895 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM442_RS18895 PF04073 Aminoacyl-tRNA editing domain AM442_RS18900 PF07411 Domain of unknown function (DUF1508) AM442_RS18905 PF08274 PhnA Zinc-Ribbon AM442_RS18905 PF03831 PhnA domain AM442_RS18910 PF04343 Protein of unknown function, DUF488 AM442_RS18920 PF01571 Aminomethyltransferase folate-binding domain AM442_RS18925 PF10411 Disulfide bond isomerase protein N-terminus AM442_RS18925 PF13098 Thioredoxin-like domain AM442_RS18940 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM442_RS18945 PF07715 TonB-dependent Receptor Plug Domain AM442_RS18945 PF00593 TonB dependent receptor AM442_RS18950 PF02245 Methylpurine-DNA glycosylase (MPG) AM442_RS18955 PF06827 Zinc finger found in FPG and IleRS AM442_RS18955 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AM442_RS18955 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AM442_RS18970 PF01741 Large-conductance mechanosensitive channel, MscL AM442_RS18975 PF03144 Elongation factor Tu domain 2 AM442_RS18975 PF00009 Elongation factor Tu GTP binding domain AM442_RS18975 PF00679 Elongation factor G C-terminus AM442_RS18980 PF00860 Permease family AM442_RS18985 PF05175 Methyltransferase small domain AM442_RS18985 PF08468 Methyltransferase small domain N-terminal AM442_RS18990 PF00324 Amino acid permease AM442_RS18995 PF01139 tRNA-splicing ligase RtcB AM442_RS19000 PF00691 OmpA family AM442_RS19000 PF13505 Outer membrane protein beta-barrel domain AM442_RS19010 PF02803 Thiolase, C-terminal domain AM442_RS19010 PF00108 Thiolase, N-terminal domain AM442_RS19020 PF00893 Small Multidrug Resistance protein AM442_RS19030 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AM442_RS19030 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AM442_RS19035 PF01011 PQQ enzyme repeat AM442_RS19040 PF04966 Carbohydrate-selective porin, OprB family AM442_RS19045 PF02515 CoA-transferase family III AM442_RS19050 PF02311 AraC-like ligand binding domain AM442_RS19050 PF12833 Helix-turn-helix domain AM442_RS19055 PF00108 Thiolase, N-terminal domain AM442_RS19055 PF02803 Thiolase, C-terminal domain AM442_RS19060 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM442_RS19060 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM442_RS19060 PF00378 Enoyl-CoA hydratase/isomerase AM442_RS19085 PF03006 Haemolysin-III related AM442_RS19090 PF07690 Major Facilitator Superfamily AM442_RS19090 PF00083 Sugar (and other) transporter AM442_RS19100 PF07517 SecA DEAD-like domain AM442_RS19100 PF02810 SEC-C motif AM442_RS19100 PF01043 SecA preprotein cross-linking domain AM442_RS19100 PF07516 SecA Wing and Scaffold domain AM442_RS19105 PF00578 AhpC/TSA family AM442_RS19105 PF10417 C-terminal domain of 1-Cys peroxiredoxin AM442_RS19110 PF00753 Metallo-beta-lactamase superfamily AM442_RS19125 PF02875 Mur ligase family, glutamate ligase domain AM442_RS19125 PF08245 Mur ligase middle domain AM442_RS19130 PF01039 Carboxyl transferase domain AM442_RS19135 PF00290 Tryptophan synthase alpha chain AM442_RS19160 PF00291 Pyridoxal-phosphate dependent enzyme AM442_RS19165 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AM442_RS19170 PF07715 TonB-dependent Receptor Plug Domain AM442_RS19170 PF00593 TonB dependent receptor AM442_RS19175 PF01923 Cobalamin adenosyltransferase AM442_RS19180 PF03009 Glycerophosphoryl diester phosphodiesterase family AM442_RS19195 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AM442_RS19200 PF00486 Transcriptional regulatory protein, C terminal AM442_RS19200 PF00072 Response regulator receiver domain AM442_RS19205 PF00672 HAMP domain AM442_RS19205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM442_RS19205 PF00512 His Kinase A (phospho-acceptor) domain AM442_RS19215 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM442_RS19215 PF12806 Acetyl-CoA dehydrogenase C-terminal like AM442_RS19215 PF02770 Acyl-CoA dehydrogenase, middle domain AM442_RS19215 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM442_RS19220 PF12806 Acetyl-CoA dehydrogenase C-terminal like AM442_RS19220 PF02770 Acyl-CoA dehydrogenase, middle domain AM442_RS19220 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM442_RS19220 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM442_RS19225 PF06146 Phosphate-starvation-inducible E AM442_RS19245 PF07715 TonB-dependent Receptor Plug Domain AM442_RS19245 PF00593 TonB dependent receptor AM442_RS19255 PF01336 OB-fold nucleic acid binding domain AM442_RS19255 PF00152 tRNA synthetases class II (D, K and N) AM442_RS19255 PF02938 GAD domain AM442_RS19260 PF17101 Stealth protein CR1, conserved region 1 AM442_RS19260 PF11380 Stealth protein CR2, conserved region 2 AM442_RS19260 PF17102 Stealth protein CR3, conserved region 3 AM442_RS19270 PF03275 UDP-galactopyranose mutase AM442_RS19305 PF00534 Glycosyl transferases group 1 AM442_RS19305 PF13439 Glycosyltransferase Family 4 AM442_RS19310 PF00535 Glycosyl transferase family 2 AM442_RS19315 PF01522 Polysaccharide deacetylase AM442_RS19330 PF01063 Amino-transferase class IV AM442_RS19335 PF08335 GlnD PII-uridylyltransferase AM442_RS19335 PF03710 Glutamate-ammonia ligase adenylyltransferase AM442_RS19340 PF00072 Response regulator receiver domain AM442_RS19340 PF00672 HAMP domain AM442_RS19340 PF00512 His Kinase A (phospho-acceptor) domain AM442_RS19340 PF01627 Hpt domain AM442_RS19340 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AM442_RS19340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM442_RS19355 PF13737 Transposase DDE domain AM442_RS19365 PF13737 Transposase DDE domain AM442_RS19380 PF02547 Queuosine biosynthesis protein AM442_RS19395 PF01702 Queuine tRNA-ribosyltransferase AM442_RS19400 PF02699 Preprotein translocase subunit AM442_RS19405 PF02355 Protein export membrane protein AM442_RS19405 PF13721 SecD export protein N-terminal TM region AM442_RS19405 PF07549 SecD/SecF GG Motif AM442_RS19410 PF02355 Protein export membrane protein AM442_RS19410 PF07549 SecD/SecF GG Motif AM442_RS19510 PF05816 Toxic anion resistance protein (TelA) AM442_RS19530 PF02195 ParB-like nuclease domain AM442_RS19530 PF17762 HTH domain found in ParB protein AM442_RS19535 PF13614 AAA domain AM442_RS19590 PF00816 H-NS histone family AM442_RS19600 PF00905 Penicillin binding protein transpeptidase domain AM442_RS19610 PF00565 Staphylococcal nuclease homologue AM442_RS19680 PF13438 Domain of unknown function (DUF4113) AM442_RS19680 PF11799 impB/mucB/samB family C-terminal domain AM442_RS19680 PF11798 IMS family HHH motif AM442_RS19680 PF00817 impB/mucB/samB family AM442_RS19700 PF06122 Conjugative relaxosome accessory transposon protein AM442_RS19715 PF06986 Type-1V conjugative transfer system mating pair stabilisation AM442_RS19725 PF06834 TraU protein AM442_RS19760 PF10411 Disulfide bond isomerase protein N-terminus AM442_RS19760 PF13098 Thioredoxin-like domain AM442_RS19795 PF01464 Transglycosylase SLT domain AM442_RS19810 PF02796 Helix-turn-helix domain of resolvase AM442_RS19810 PF00239 Resolvase, N terminal domain AM442_RS19830 PF00665 Integrase core domain AM442_RS19830 PF13936 Helix-turn-helix domain AM442_RS19865 PF18272 single-stranded DNA binding TraI N-terminal subdomain AM442_RS19865 PF07057 DNA helicase TraI AM442_RS19865 PF18340 DNA relaxase TraI 2B/2B-like domain AM442_RS19865 PF08751 TrwC relaxase AM442_RS19900 PF00226 DnaJ domain AM442_RS19900 PF00684 DnaJ central domain AM442_RS19900 PF01556 DnaJ C terminal domain