AYP_RS00130	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
AYP_RS00130	PWY-6167	flavin biosynthesis II (archaea)
AYP_RS00130	PWY-6168	flavin biosynthesis III (fungi)
AYP_RS00130	PWY-7863	AYP_RS00130
AYP_RS00175	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AYP_RS00200	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
AYP_RS00200	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
AYP_RS00200	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
AYP_RS00200	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
AYP_RS00200	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
AYP_RS00200	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
AYP_RS00200	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
AYP_RS00200	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
AYP_RS00200	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
AYP_RS00200	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
AYP_RS00250	PWY-5316	nicotine biosynthesis
AYP_RS00250	PWY-5381	pyridine nucleotide cycling (plants)
AYP_RS00250	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
AYP_RS00250	PWY-7342	superpathway of nicotine biosynthesis
AYP_RS00295	PWY-1042	glycolysis IV (plant cytosol)
AYP_RS00295	PWY-1622	formaldehyde assimilation I (serine pathway)
AYP_RS00295	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AYP_RS00295	PWY-5484	glycolysis II (from fructose 6-phosphate)
AYP_RS00295	PWY-5723	Rubisco shunt
AYP_RS00295	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AYP_RS00295	PWY-6143	CMP-pseudaminate biosynthesis
AYP_RS00295	PWY-6886	1-butanol autotrophic biosynthesis
AYP_RS00295	PWY-6901	superpathway of glucose and xylose degradation
AYP_RS00295	PWY-7003	glycerol degradation to butanol
AYP_RS00295	PWY-7124	ethylene biosynthesis V (engineered)
AYP_RS00295	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AYP_RS00295	PWY-7330	UDP-<i>N</i>-acetyl-&beta;-L-fucosamine biosynthesis
AYP_RS00295	PWY-7331	UDP-<i>N</i>-acetyl-&beta;-L-quinovosamine biosynthesis
AYP_RS00295	PWY-7332	superpathway of UDP-<I>N</i>-acetylglucosamine-derived O-antigen building blocks biosynthesis
AYP_RS00295	PWY-7719	AYP_RS00295
AYP_RS00305	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AYP_RS00305	PWY-6143	CMP-pseudaminate biosynthesis
AYP_RS00310	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AYP_RS00310	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AYP_RS00310	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AYP_RS00310	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AYP_RS00320	PWY-6143	CMP-pseudaminate biosynthesis
AYP_RS00360	PWY-3801	sucrose degradation II (sucrose synthase)
AYP_RS00360	PWY-6527	stachyose degradation
AYP_RS00360	PWY-7238	sucrose biosynthesis II
AYP_RS00360	PWY-7343	UDP-glucose biosynthesis
AYP_RS00360	PWY-7817	AYP_RS00360
AYP_RS00365	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
AYP_RS00365	PWY-7820	AYP_RS00365
AYP_RS00370	PWY-3801	sucrose degradation II (sucrose synthase)
AYP_RS00370	PWY-5054	sorbitol biosynthesis I
AYP_RS00370	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
AYP_RS00370	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AYP_RS00370	PWY-5659	GDP-mannose biosynthesis
AYP_RS00370	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AYP_RS00370	PWY-621	sucrose degradation III (sucrose invertase)
AYP_RS00370	PWY-622	starch biosynthesis
AYP_RS00370	PWY-6981	chitin biosynthesis
AYP_RS00370	PWY-6992	1,5-anhydrofructose degradation
AYP_RS00370	PWY-7238	sucrose biosynthesis II
AYP_RS00370	PWY-7347	sucrose biosynthesis III
AYP_RS00370	PWY-7385	1,3-propanediol biosynthesis (engineered)
AYP_RS00375	PWY-3821	galactose degradation III
AYP_RS00375	PWY-6317	galactose degradation I (Leloir pathway)
AYP_RS00375	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
AYP_RS00375	PWY-6527	stachyose degradation
AYP_RS00375	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
AYP_RS00375	PWY-7344	UDP-D-galactose biosynthesis
AYP_RS00380	PWY-6749	CMP-legionaminate biosynthesis I
AYP_RS00400	PWY-6454	vancomycin resistance I
AYP_RS00400	PWY-6901	superpathway of glucose and xylose degradation
AYP_RS00405	PWY-5913	TCA cycle VI (obligate autotrophs)
AYP_RS00405	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
AYP_RS00405	PWY-6638	sulfolactate degradation III
AYP_RS00405	PWY-6642	(<i>R</i>)-cysteate degradation
AYP_RS00405	PWY-6643	coenzyme M biosynthesis II
AYP_RS00405	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AYP_RS00405	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AYP_RS00405	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AYP_RS00420	PWY-5747	2-methylcitrate cycle II
AYP_RS00530	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AYP_RS00555	PWY-5642	2,4-dinitrotoluene degradation
AYP_RS00555	PWY-6373	acrylate degradation
AYP_RS00590	PWY-6157	autoinducer AI-1 biosynthesis
AYP_RS00645	PWY-6012	acyl carrier protein metabolism I
AYP_RS00645	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
AYP_RS00700	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AYP_RS00810	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AYP_RS00820	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AYP_RS00935	PWY-6936	seleno-amino acid biosynthesis
AYP_RS01040	PWY-7805	AYP_RS01040
AYP_RS01040	PWY-7807	AYP_RS01040
AYP_RS01105	PWY-6614	tetrahydrofolate biosynthesis
AYP_RS01110	PWY-6749	CMP-legionaminate biosynthesis I
AYP_RS01240	PWY-5525	D-glucuronate degradation I
AYP_RS01250	PWY-6167	flavin biosynthesis II (archaea)
AYP_RS01250	PWY-6168	flavin biosynthesis III (fungi)
AYP_RS01250	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AYP_RS01285	PWY-1042	glycolysis IV (plant cytosol)
AYP_RS01285	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AYP_RS01285	PWY-5484	glycolysis II (from fructose 6-phosphate)
AYP_RS01285	PWY-5723	Rubisco shunt
AYP_RS01285	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AYP_RS01285	PWY-6886	1-butanol autotrophic biosynthesis
AYP_RS01285	PWY-6901	superpathway of glucose and xylose degradation
AYP_RS01285	PWY-7003	glycerol degradation to butanol
AYP_RS01285	PWY-7124	ethylene biosynthesis V (engineered)
AYP_RS01285	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AYP_RS01350	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AYP_RS01350	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AYP_RS01380	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
AYP_RS01415	PWY-4983	L-citrulline-nitric oxide cycle
AYP_RS01415	PWY-4984	urea cycle
AYP_RS01415	PWY-5	canavanine biosynthesis
AYP_RS01415	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AYP_RS01415	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AYP_RS01430	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AYP_RS01430	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AYP_RS01435	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AYP_RS01435	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AYP_RS01480	PWY-181	photorespiration
AYP_RS01485	PWY-5958	acridone alkaloid biosynthesis
AYP_RS01485	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AYP_RS01485	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AYP_RS01650	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AYP_RS01650	PWY-6435	4-hydroxybenzoate biosynthesis V
AYP_RS01650	PWY-6863	pyruvate fermentation to hexanol
AYP_RS01650	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AYP_RS01650	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AYP_RS01650	PWY-6948	sitosterol degradation to androstenedione
AYP_RS01650	PWY-7094	fatty acid salvage
AYP_RS01650	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
AYP_RS01650	PWY-7337	10-<i>cis</i>-heptadecenoyl-CoA degradation (yeast)
AYP_RS01650	PWY-7338	10-<i>trans</i>-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
AYP_RS01650	PWY-7339	10-<i>trans</i>-heptadecenoyl-CoA degradation (MFE-dependent, yeast)
AYP_RS01650	PWY-7340	9-<i>cis</i>, 11-<i>trans</i>-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
AYP_RS01650	PWY-735	jasmonic acid biosynthesis
AYP_RS01650	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AYP_RS01650	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AYP_RS01650	PWY-7726	AYP_RS01650
AYP_RS01655	PWY-1361	benzoyl-CoA degradation I (aerobic)
AYP_RS01655	PWY-5109	2-methylbutanoate biosynthesis
AYP_RS01655	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AYP_RS01655	PWY-5137	fatty acid &beta;-oxidation III (unsaturated, odd number)
AYP_RS01655	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AYP_RS01655	PWY-5177	glutaryl-CoA degradation
AYP_RS01655	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AYP_RS01655	PWY-6435	4-hydroxybenzoate biosynthesis V
AYP_RS01655	PWY-6583	pyruvate fermentation to butanol I
AYP_RS01655	PWY-6837	fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent)
AYP_RS01655	PWY-6863	pyruvate fermentation to hexanol
AYP_RS01655	PWY-6883	pyruvate fermentation to butanol II
AYP_RS01655	PWY-6944	androstenedione degradation
AYP_RS01655	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AYP_RS01655	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AYP_RS01655	PWY-7007	methyl ketone biosynthesis
AYP_RS01655	PWY-7046	4-coumarate degradation (anaerobic)
AYP_RS01655	PWY-7094	fatty acid salvage
AYP_RS01655	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AYP_RS01655	PWY-7291	oleate &beta;-oxidation (isomerase-dependent, yeast)
AYP_RS01655	PWY-735	jasmonic acid biosynthesis
AYP_RS01655	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AYP_RS01655	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AYP_RS01655	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AYP_RS01655	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
AYP_RS01655	PWY-7726	AYP_RS01655
AYP_RS01655	PWY-7778	AYP_RS01655
AYP_RS01655	PWY-7779	AYP_RS01655
AYP_RS01655	PWY-81	toluene degradation to benzoyl-CoA (anaerobic)
AYP_RS01695	PWY-5269	cardiolipin biosynthesis II
AYP_RS01695	PWY-5668	cardiolipin biosynthesis I
AYP_RS01695	PWY-7817	AYP_RS01695
AYP_RS01765	PWY-7851	AYP_RS01765
AYP_RS01785	PWY-1042	glycolysis IV (plant cytosol)
AYP_RS01785	PWY-5484	glycolysis II (from fructose 6-phosphate)
AYP_RS01785	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AYP_RS01785	PWY-7003	glycerol degradation to butanol
AYP_RS01890	PWY-5839	menaquinol-7 biosynthesis
AYP_RS01890	PWY-5844	menaquinol-9 biosynthesis
AYP_RS01890	PWY-5849	menaquinol-6 biosynthesis
AYP_RS01890	PWY-5890	menaquinol-10 biosynthesis
AYP_RS01890	PWY-5891	menaquinol-11 biosynthesis
AYP_RS01890	PWY-5892	menaquinol-12 biosynthesis
AYP_RS01890	PWY-5895	menaquinol-13 biosynthesis
AYP_RS02020	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AYP_RS02020	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AYP_RS02055	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AYP_RS02180	PWY-5506	methanol oxidation to formaldehyde IV
AYP_RS02235	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AYP_RS02280	PWY-2941	L-lysine biosynthesis II
AYP_RS02280	PWY-2942	L-lysine biosynthesis III
AYP_RS02280	PWY-5097	L-lysine biosynthesis VI
AYP_RS02280	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AYP_RS02280	PWY-6559	spermidine biosynthesis II
AYP_RS02280	PWY-6562	norspermidine biosynthesis
AYP_RS02280	PWY-7153	grixazone biosynthesis
AYP_RS02280	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AYP_RS02400	PWY-2201	folate transformations I
AYP_RS02400	PWY-5497	purine nucleobases degradation II (anaerobic)
AYP_RS02430	PWY-3841	folate transformations II
AYP_RS02430	PWY-6614	tetrahydrofolate biosynthesis
AYP_RS02435	PWY-3841	folate transformations II
AYP_RS02435	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AYP_RS02435	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AYP_RS02435	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AYP_RS02435	PWY-7199	pyrimidine deoxyribonucleosides salvage
AYP_RS02435	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AYP_RS02505	PWY-5344	L-homocysteine biosynthesis
AYP_RS02510	PWY-6871	3-methylbutanol biosynthesis
AYP_RS02550	PWY-5392	reductive TCA cycle II
AYP_RS02550	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AYP_RS02550	PWY-5690	TCA cycle II (plants and fungi)
AYP_RS02550	PWY-5913	TCA cycle VI (obligate autotrophs)
AYP_RS02550	PWY-6728	methylaspartate cycle
AYP_RS02550	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AYP_RS02550	PWY-7254	TCA cycle VII (acetate-producers)
AYP_RS02550	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AYP_RS02555	PWY-1281	sulfoacetaldehyde degradation I
AYP_RS02555	PWY-5482	pyruvate fermentation to acetate II
AYP_RS02555	PWY-5485	pyruvate fermentation to acetate IV
AYP_RS02555	PWY-5497	purine nucleobases degradation II (anaerobic)
AYP_RS02555	PWY-6637	sulfolactate degradation II
AYP_RS02560	PWY-5482	pyruvate fermentation to acetate II
AYP_RS02560	PWY-5485	pyruvate fermentation to acetate IV
AYP_RS02560	PWY-5497	purine nucleobases degradation II (anaerobic)
AYP_RS02570	PWY-5101	L-isoleucine biosynthesis II
AYP_RS02570	PWY-5103	L-isoleucine biosynthesis III
AYP_RS02570	PWY-5104	L-isoleucine biosynthesis IV
AYP_RS02570	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AYP_RS02575	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AYP_RS02575	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
AYP_RS02575	PWY-7242	D-fructuronate degradation
AYP_RS02575	PWY-7310	D-glucosaminate degradation
AYP_RS02575	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
AYP_RS02585	PWY-5530	sorbitol biosynthesis II
AYP_RS02585	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AYP_RS02595	PWY-3341	L-proline biosynthesis III
AYP_RS02595	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AYP_RS02610	PWY-6902	chitin degradation II
AYP_RS02610	PWY-7822	AYP_RS02610
AYP_RS02635	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AYP_RS02635	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
AYP_RS02635	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AYP_RS02635	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AYP_RS02635	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
AYP_RS02635	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AYP_RS02635	PWY-7205	CMP phosphorylation
AYP_RS02635	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AYP_RS02635	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AYP_RS02635	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AYP_RS02635	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AYP_RS02635	PWY-7224	purine deoxyribonucleosides salvage
AYP_RS02635	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AYP_RS02635	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AYP_RS02640	PWY-2201	folate transformations I
AYP_RS02760	PWY-5367	petroselinate biosynthesis
AYP_RS02760	PWY-5515	L-arabinose degradation II
AYP_RS02760	PWY-5525	D-glucuronate degradation I
AYP_RS02760	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AYP_RS02760	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AYP_RS02760	PWY-5989	stearate biosynthesis II (bacteria and plants)
AYP_RS02760	PWY-5994	palmitate biosynthesis I (animals and fungi)
AYP_RS02760	PWY-6113	superpathway of mycolate biosynthesis
AYP_RS02760	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AYP_RS02760	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AYP_RS02760	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AYP_RS02760	PWY-7663	gondoate biosynthesis (anaerobic)
AYP_RS02760	PWY-7664	oleate biosynthesis IV (anaerobic)
AYP_RS02760	PWY-7858	AYP_RS02760
AYP_RS02760	PWYG-321	mycolate biosynthesis
AYP_RS02775	PWY-6012	acyl carrier protein metabolism I
AYP_RS02775	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
AYP_RS02810	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AYP_RS02810	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AYP_RS02810	PWY-5989	stearate biosynthesis II (bacteria and plants)
AYP_RS02810	PWY-6113	superpathway of mycolate biosynthesis
AYP_RS02810	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AYP_RS02810	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AYP_RS02810	PWY-7663	gondoate biosynthesis (anaerobic)
AYP_RS02810	PWY-7664	oleate biosynthesis IV (anaerobic)
AYP_RS02810	PWY-7858	AYP_RS02810
AYP_RS02810	PWYG-321	mycolate biosynthesis
AYP_RS02850	PWY-5101	L-isoleucine biosynthesis II
AYP_RS02850	PWY-5103	L-isoleucine biosynthesis III
AYP_RS02850	PWY-5104	L-isoleucine biosynthesis IV
AYP_RS02850	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AYP_RS02850	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AYP_RS02850	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AYP_RS02850	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AYP_RS02855	PWY-5101	L-isoleucine biosynthesis II
AYP_RS02855	PWY-5103	L-isoleucine biosynthesis III
AYP_RS02855	PWY-5104	L-isoleucine biosynthesis IV
AYP_RS02855	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AYP_RS02855	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AYP_RS02855	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AYP_RS02855	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AYP_RS02860	PWY-5103	L-isoleucine biosynthesis III
AYP_RS02860	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AYP_RS03020	PWY-6936	seleno-amino acid biosynthesis
AYP_RS03060	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AYP_RS03060	PWY-6148	tetrahydromethanopterin biosynthesis
AYP_RS03060	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AYP_RS03060	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AYP_RS03060	PWY-7852	AYP_RS03060
AYP_RS03060	PWY-7853	AYP_RS03060
AYP_RS03065	PWY-6654	phosphopantothenate biosynthesis III
AYP_RS03175	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AYP_RS03190	PWY-6679	jadomycin biosynthesis
AYP_RS03190	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AYP_RS03200	PWY-3341	L-proline biosynthesis III
AYP_RS03200	PWY-4981	L-proline biosynthesis II (from arginine)
AYP_RS03200	PWY-6344	L-ornithine degradation II (Stickland reaction)
AYP_RS03310	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AYP_RS03310	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AYP_RS03330	PWY-5958	acridone alkaloid biosynthesis
AYP_RS03330	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AYP_RS03330	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AYP_RS03380	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
AYP_RS03380	PWY-5368	dimorphecolate biosynthesis
AYP_RS03380	PWY-5995	linoleate biosynthesis I (plants)
AYP_RS03380	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
AYP_RS03380	PWY-6803	phosphatidylcholine acyl editing
AYP_RS03380	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
AYP_RS03380	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
AYP_RS03380	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
AYP_RS03380	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
AYP_RS03380	PWY-7470	phosphatidylcholine biosynthesis VII
AYP_RS03380	PWY-7618	ricinoleate biosynthesis
AYP_RS03395	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AYP_RS03405	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AYP_RS03405	PWY-5723	Rubisco shunt
AYP_RS03445	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AYP_RS03450	PWY-5316	nicotine biosynthesis
AYP_RS03450	PWY-7342	superpathway of nicotine biosynthesis
AYP_RS03475	PWY-6609	adenine and adenosine salvage III
AYP_RS03475	PWY-6611	adenine and adenosine salvage V
AYP_RS03475	PWY-7179	purine deoxyribonucleosides degradation I
AYP_RS03475	PWY-7179-1	purine deoxyribonucleosides degradation
AYP_RS03575	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AYP_RS03575	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AYP_RS03575	PWY-6936	seleno-amino acid biosynthesis
AYP_RS03575	PWY-702	L-methionine biosynthesis II
AYP_RS03710	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AYP_RS03710	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AYP_RS03710	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AYP_RS03710	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AYP_RS03710	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AYP_RS03710	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AYP_RS03710	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AYP_RS03710	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AYP_RS03720	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AYP_RS03720	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AYP_RS03720	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AYP_RS03720	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AYP_RS03720	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AYP_RS03720	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AYP_RS03720	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AYP_RS03720	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AYP_RS03815	PWY-7183	pyrimidine nucleobases salvage I
AYP_RS03925	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AYP_RS03975	PWY-3961	phosphopantothenate biosynthesis II
AYP_RS04045	PWY-2201	folate transformations I
AYP_RS04045	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AYP_RS04050	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
AYP_RS04090	PWY-4381	fatty acid biosynthesis initiation I
AYP_RS04090	PWY-6799	fatty acid biosynthesis (plant mitochondria)
AYP_RS04090	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AYP_RS04095	PWY-5367	petroselinate biosynthesis
AYP_RS04095	PWY-5515	L-arabinose degradation II
AYP_RS04095	PWY-5525	D-glucuronate degradation I
AYP_RS04095	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AYP_RS04095	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AYP_RS04095	PWY-5989	stearate biosynthesis II (bacteria and plants)
AYP_RS04095	PWY-5994	palmitate biosynthesis I (animals and fungi)
AYP_RS04095	PWY-6113	superpathway of mycolate biosynthesis
AYP_RS04095	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AYP_RS04095	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AYP_RS04095	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AYP_RS04095	PWY-7663	gondoate biosynthesis (anaerobic)
AYP_RS04095	PWY-7664	oleate biosynthesis IV (anaerobic)
AYP_RS04095	PWY-7858	AYP_RS04095
AYP_RS04095	PWYG-321	mycolate biosynthesis
AYP_RS04120	PWY-6167	flavin biosynthesis II (archaea)
AYP_RS04120	PWY-6168	flavin biosynthesis III (fungi)
AYP_RS04135	PWY-5155	&beta;-alanine biosynthesis III
AYP_RS04140	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
AYP_RS04175	PWY-7560	methylerythritol phosphate pathway II
AYP_RS04190	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AYP_RS04225	PWY-7851	AYP_RS04225
AYP_RS04295	PWY-5381	pyridine nucleotide cycling (plants)
AYP_RS04295	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
AYP_RS04295	PWY-7761	AYP_RS04295
AYP_RS04360	PWY-7799	AYP_RS04360
AYP_RS04365	PWY-7801	AYP_RS04365
AYP_RS04435	PWY-6749	CMP-legionaminate biosynthesis I
AYP_RS04440	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AYP_RS04440	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AYP_RS04495	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AYP_RS04535	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AYP_RS04535	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AYP_RS04555	PWY-4041	&gamma;-glutamyl cycle
AYP_RS04555	PWY-5826	hypoglycin biosynthesis
AYP_RS04650	PWY-7254	TCA cycle VII (acetate-producers)
AYP_RS04655	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
AYP_RS04655	PWY-7494	choline degradation IV
AYP_RS04660	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
AYP_RS04660	PWY-7494	choline degradation IV
AYP_RS04845	PWY-6317	galactose degradation I (Leloir pathway)
AYP_RS04875	PWY-6891	thiazole biosynthesis II (Bacillus)
AYP_RS04875	PWY-6892	thiazole biosynthesis I (E. coli)
AYP_RS04875	PWY-7560	methylerythritol phosphate pathway II
AYP_RS04885	PWY-2201	folate transformations I
AYP_RS04885	PWY-3841	folate transformations II
AYP_RS04945	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AYP_RS04945	PWY-5743	3-hydroxypropanoate cycle
AYP_RS04945	PWY-5744	glyoxylate assimilation
AYP_RS04945	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AYP_RS04945	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AYP_RS04945	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AYP_RS04945	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AYP_RS05035	PWY-5278	sulfite oxidation III
AYP_RS05035	PWY-5340	sulfate activation for sulfonation
AYP_RS05035	PWY-6683	sulfate reduction III (assimilatory)
AYP_RS05035	PWY-6932	selenate reduction
AYP_RS05040	PWY-5278	sulfite oxidation III
AYP_RS05040	PWY-5340	sulfate activation for sulfonation
AYP_RS05040	PWY-6683	sulfate reduction III (assimilatory)
AYP_RS05040	PWY-6932	selenate reduction
AYP_RS05075	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AYP_RS05095	PWY-5704	urea degradation II
AYP_RS05100	PWY-5704	urea degradation II
AYP_RS05150	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AYP_RS05185	PWY-6825	phosphatidylcholine biosynthesis V
AYP_RS05660	PWY-2201	folate transformations I
AYP_RS05680	PWY-5381	pyridine nucleotide cycling (plants)
AYP_RS05680	PWY-7761	AYP_RS05680
AYP_RS05740	PWY-5686	UMP biosynthesis
AYP_RS05740	PWY-7790	AYP_RS05740
AYP_RS05740	PWY-7791	AYP_RS05740
AYP_RS05750	PWY-4983	L-citrulline-nitric oxide cycle
AYP_RS05750	PWY-4984	urea cycle
AYP_RS05750	PWY-5	canavanine biosynthesis
AYP_RS05750	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AYP_RS05750	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AYP_RS05870	PWY-6614	tetrahydrofolate biosynthesis
AYP_RS06020	PWY-6614	tetrahydrofolate biosynthesis
AYP_RS06125	PWY-6610	adenine and adenosine salvage IV
AYP_RS06150	PWY-2941	L-lysine biosynthesis II
AYP_RS06150	PWY-2942	L-lysine biosynthesis III
AYP_RS06150	PWY-5097	L-lysine biosynthesis VI
AYP_RS06150	PWY-6559	spermidine biosynthesis II
AYP_RS06150	PWY-6562	norspermidine biosynthesis
AYP_RS06150	PWY-7153	grixazone biosynthesis
AYP_RS06160	PWY-1042	glycolysis IV (plant cytosol)
AYP_RS06160	PWY-5484	glycolysis II (from fructose 6-phosphate)
AYP_RS06160	PWY-6901	superpathway of glucose and xylose degradation
AYP_RS06160	PWY-7003	glycerol degradation to butanol
AYP_RS06170	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AYP_RS06230	PWY-6825	phosphatidylcholine biosynthesis V
AYP_RS06240	PWY-5686	UMP biosynthesis
AYP_RS06240	PWY-7790	AYP_RS06240
AYP_RS06240	PWY-7791	AYP_RS06240
AYP_RS06315	PWY-4381	fatty acid biosynthesis initiation I
AYP_RS06375	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AYP_RS06460	PWY-3341	L-proline biosynthesis III
AYP_RS06460	PWY-4981	L-proline biosynthesis II (from arginine)
AYP_RS06460	PWY-6344	L-ornithine degradation II (Stickland reaction)
AYP_RS06750	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AYP_RS06750	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AYP_RS06805	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AYP_RS06870	PWY-1361	benzoyl-CoA degradation I (aerobic)
AYP_RS06870	PWY-5109	2-methylbutanoate biosynthesis
AYP_RS06870	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AYP_RS06870	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AYP_RS06870	PWY-5177	glutaryl-CoA degradation
AYP_RS06870	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AYP_RS06870	PWY-6435	4-hydroxybenzoate biosynthesis V
AYP_RS06870	PWY-6583	pyruvate fermentation to butanol I
AYP_RS06870	PWY-6863	pyruvate fermentation to hexanol
AYP_RS06870	PWY-6883	pyruvate fermentation to butanol II
AYP_RS06870	PWY-6944	androstenedione degradation
AYP_RS06870	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AYP_RS06870	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AYP_RS06870	PWY-7007	methyl ketone biosynthesis
AYP_RS06870	PWY-7046	4-coumarate degradation (anaerobic)
AYP_RS06870	PWY-7094	fatty acid salvage
AYP_RS06870	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AYP_RS06870	PWY-735	jasmonic acid biosynthesis
AYP_RS06870	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AYP_RS06870	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AYP_RS06870	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AYP_RS06870	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
AYP_RS06870	PWY-7726	AYP_RS06870
AYP_RS06870	PWY-7778	AYP_RS06870
AYP_RS06870	PWY-7779	AYP_RS06870
AYP_RS06870	PWY-81	toluene degradation to benzoyl-CoA (anaerobic)
AYP_RS07005	PWY-5169	cyanurate degradation
AYP_RS07005	PWY-5703	urea degradation I
AYP_RS07035	PWY-5169	cyanurate degradation
AYP_RS07035	PWY-5703	urea degradation I
AYP_RS07035	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AYP_RS07280	PWY-5176	coumarin biosynthesis (via 2-coumarate)
AYP_RS07315	PWY-1361	benzoyl-CoA degradation I (aerobic)
AYP_RS07315	PWY-5109	2-methylbutanoate biosynthesis
AYP_RS07315	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AYP_RS07315	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AYP_RS07315	PWY-5177	glutaryl-CoA degradation
AYP_RS07315	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AYP_RS07315	PWY-6435	4-hydroxybenzoate biosynthesis V
AYP_RS07315	PWY-6583	pyruvate fermentation to butanol I
AYP_RS07315	PWY-6863	pyruvate fermentation to hexanol
AYP_RS07315	PWY-6883	pyruvate fermentation to butanol II
AYP_RS07315	PWY-6944	androstenedione degradation
AYP_RS07315	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AYP_RS07315	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AYP_RS07315	PWY-7007	methyl ketone biosynthesis
AYP_RS07315	PWY-7046	4-coumarate degradation (anaerobic)
AYP_RS07315	PWY-7094	fatty acid salvage
AYP_RS07315	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AYP_RS07315	PWY-735	jasmonic acid biosynthesis
AYP_RS07315	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AYP_RS07315	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AYP_RS07315	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AYP_RS07315	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
AYP_RS07315	PWY-7726	AYP_RS07315
AYP_RS07315	PWY-7778	AYP_RS07315
AYP_RS07315	PWY-7779	AYP_RS07315
AYP_RS07315	PWY-81	toluene degradation to benzoyl-CoA (anaerobic)
AYP_RS07320	PWY-1361	benzoyl-CoA degradation I (aerobic)
AYP_RS07320	PWY-2361	3-oxoadipate degradation
AYP_RS07320	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
AYP_RS07325	PWY-1341	phenylacetate degradation II (anaerobic)
AYP_RS07325	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
AYP_RS07325	PWY-7716	AYP_RS07325
AYP_RS07505	PWY-6832	2-aminoethylphosphonate degradation II
AYP_RS07540	PWY-723	alkylnitronates degradation
AYP_RS07560	PWY-1361	benzoyl-CoA degradation I (aerobic)
AYP_RS07560	PWY-5109	2-methylbutanoate biosynthesis
AYP_RS07560	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AYP_RS07560	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AYP_RS07560	PWY-5177	glutaryl-CoA degradation
AYP_RS07560	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AYP_RS07560	PWY-6435	4-hydroxybenzoate biosynthesis V
AYP_RS07560	PWY-6583	pyruvate fermentation to butanol I
AYP_RS07560	PWY-6863	pyruvate fermentation to hexanol
AYP_RS07560	PWY-6883	pyruvate fermentation to butanol II
AYP_RS07560	PWY-6944	androstenedione degradation
AYP_RS07560	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AYP_RS07560	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AYP_RS07560	PWY-7007	methyl ketone biosynthesis
AYP_RS07560	PWY-7046	4-coumarate degradation (anaerobic)
AYP_RS07560	PWY-7094	fatty acid salvage
AYP_RS07560	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AYP_RS07560	PWY-735	jasmonic acid biosynthesis
AYP_RS07560	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AYP_RS07560	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AYP_RS07560	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AYP_RS07560	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
AYP_RS07560	PWY-7726	AYP_RS07560
AYP_RS07560	PWY-7778	AYP_RS07560
AYP_RS07560	PWY-7779	AYP_RS07560
AYP_RS07560	PWY-81	toluene degradation to benzoyl-CoA (anaerobic)
AYP_RS07645	PWY-6679	jadomycin biosynthesis
AYP_RS07645	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AYP_RS07830	PWY-6823	molybdenum cofactor biosynthesis
AYP_RS07830	PWY-6891	thiazole biosynthesis II (Bacillus)
AYP_RS07830	PWY-6892	thiazole biosynthesis I (E. coli)
AYP_RS07830	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AYP_RS07840	PWY-6936	seleno-amino acid biosynthesis
AYP_RS07840	PWY-7274	D-cycloserine biosynthesis
AYP_RS07865	PWY-4061	glutathione-mediated detoxification I
AYP_RS07865	PWY-6842	glutathione-mediated detoxification II
AYP_RS07865	PWY-7112	4-hydroxy-2-nonenal detoxification
AYP_RS07865	PWY-7533	gliotoxin biosynthesis
AYP_RS07905	PWY-5794	malonate degradation I (biotin-independent)
AYP_RS07905	PWY-6060	malonate degradation II (biotin-dependent)
AYP_RS07910	PWY-5796	malonate decarboxylase activation
AYP_RS07920	PWY-6060	malonate degradation II (biotin-dependent)
AYP_RS07920	PWY-6679	jadomycin biosynthesis
AYP_RS07920	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AYP_RS07925	PWY-6060	malonate degradation II (biotin-dependent)
AYP_RS07930	PWY-5796	malonate decarboxylase activation
AYP_RS07935	PWY-4381	fatty acid biosynthesis initiation I
AYP_RS07935	PWY-6799	fatty acid biosynthesis (plant mitochondria)
AYP_RS07935	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AYP_RS08025	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AYP_RS08025	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AYP_RS08060	PWY-4202	arsenate detoxification I (glutaredoxin)
AYP_RS08060	PWY-4621	arsenate detoxification II (glutaredoxin)
AYP_RS08105	PWY-6936	seleno-amino acid biosynthesis
AYP_RS08105	PWY-7274	D-cycloserine biosynthesis
AYP_RS08110	PWY-6004	glycine betaine biosynthesis V (from glycine)
AYP_RS08380	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
AYP_RS08385	PWY-6700	queuosine biosynthesis
AYP_RS08390	PWY-6938	NADH repair
AYP_RS08430	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AYP_RS08430	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
AYP_RS08435	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AYP_RS08435	PWY-5723	Rubisco shunt
AYP_RS08435	PWY-6891	thiazole biosynthesis II (Bacillus)
AYP_RS08435	PWY-6892	thiazole biosynthesis I (E. coli)
AYP_RS08435	PWY-6901	superpathway of glucose and xylose degradation
AYP_RS08435	PWY-7560	methylerythritol phosphate pathway II
AYP_RS08475	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
AYP_RS08475	PWY-6853	ethylene biosynthesis II (microbes)
AYP_RS08475	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AYP_RS08555	PWY-1042	glycolysis IV (plant cytosol)
AYP_RS08555	PWY-5484	glycolysis II (from fructose 6-phosphate)
AYP_RS08555	PWY-6886	1-butanol autotrophic biosynthesis
AYP_RS08555	PWY-6901	superpathway of glucose and xylose degradation
AYP_RS08555	PWY-7003	glycerol degradation to butanol
AYP_RS08565	PWY-1042	glycolysis IV (plant cytosol)
AYP_RS08565	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AYP_RS08565	PWY-5484	glycolysis II (from fructose 6-phosphate)
AYP_RS08565	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AYP_RS08565	PWY-7385	1,3-propanediol biosynthesis (engineered)
AYP_RS08625	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AYP_RS08695	PWY-7205	CMP phosphorylation
AYP_RS08715	PWY-5686	UMP biosynthesis
AYP_RS08715	PWY-7790	AYP_RS08715
AYP_RS08715	PWY-7791	AYP_RS08715
AYP_RS08740	PWY-6728	methylaspartate cycle
AYP_RS08740	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AYP_RS08740	PWY-7118	chitin degradation to ethanol
AYP_RS08740	PWY-7294	xylose degradation IV
AYP_RS08740	PWY-7295	L-arabinose degradation IV
AYP_RS08740	PWY-7854	AYP_RS08740
AYP_RS08745	PWY-0	putrescine degradation III
AYP_RS08745	PWY-6117	spermine and spermidine degradation I
AYP_RS08900	PWY-6823	molybdenum cofactor biosynthesis
AYP_RS08900	PWY-6891	thiazole biosynthesis II (Bacillus)
AYP_RS08900	PWY-6892	thiazole biosynthesis I (E. coli)
AYP_RS08900	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AYP_RS09040	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AYP_RS09040	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AYP_RS09040	PWY-6269	adenosylcobalamin salvage from cobinamide II
AYP_RS09045	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AYP_RS09045	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AYP_RS09045	PWY-6269	adenosylcobalamin salvage from cobinamide II
AYP_RS09060	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AYP_RS09060	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AYP_RS09060	PWY-6269	adenosylcobalamin salvage from cobinamide II
AYP_RS09065	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AYP_RS09065	PWY-6164	3-dehydroquinate biosynthesis I
AYP_RS09065	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AYP_RS09095	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
AYP_RS09095	PWY-622	starch biosynthesis
AYP_RS09155	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AYP_RS09260	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AYP_RS09290	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AYP_RS09290	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AYP_RS09310	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
AYP_RS09310	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AYP_RS09315	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AYP_RS09430	PWY-5392	reductive TCA cycle II
AYP_RS09430	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AYP_RS09430	PWY-5690	TCA cycle II (plants and fungi)
AYP_RS09430	PWY-5913	TCA cycle VI (obligate autotrophs)
AYP_RS09430	PWY-6728	methylaspartate cycle
AYP_RS09430	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AYP_RS09430	PWY-7254	TCA cycle VII (acetate-producers)
AYP_RS09430	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AYP_RS09545	PWY-2421	indole-3-acetate degradation VIII (bacterial)
AYP_RS09545	PWY-5648	2-nitrobenzoate degradation II
AYP_RS09545	PWY-6079	anthranilate degradation I (aerobic)
AYP_RS09550	PWY-2421	indole-3-acetate degradation VIII (bacterial)
AYP_RS09550	PWY-5648	2-nitrobenzoate degradation II
AYP_RS09550	PWY-6079	anthranilate degradation I (aerobic)
AYP_RS09575	PWY-5901	2,3-dihydroxybenzoate biosynthesis
AYP_RS09580	PWY-5901	2,3-dihydroxybenzoate biosynthesis
AYP_RS09610	PWY-6420	pyrroloquinoline quinone biosynthesis
AYP_RS09625	PWY-7533	gliotoxin biosynthesis
AYP_RS09670	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AYP_RS09670	PWY-3162	L-tryptophan degradation V (side chain pathway)
AYP_RS09670	PWY-5057	L-valine degradation II
AYP_RS09670	PWY-5076	L-leucine degradation III
AYP_RS09670	PWY-5078	L-isoleucine degradation II
AYP_RS09670	PWY-5079	L-phenylalanine degradation III
AYP_RS09670	PWY-5082	L-methionine degradation III
AYP_RS09670	PWY-5480	pyruvate fermentation to ethanol I
AYP_RS09670	PWY-5486	pyruvate fermentation to ethanol II
AYP_RS09670	PWY-5751	phenylethanol biosynthesis
AYP_RS09670	PWY-6313	serotonin degradation
AYP_RS09670	PWY-6333	acetaldehyde biosynthesis I
AYP_RS09670	PWY-6342	noradrenaline and adrenaline degradation
AYP_RS09670	PWY-6454	vancomycin resistance I
AYP_RS09670	PWY-6587	pyruvate fermentation to ethanol III
AYP_RS09670	PWY-6802	salidroside biosynthesis
AYP_RS09670	PWY-6871	3-methylbutanol biosynthesis
AYP_RS09670	PWY-6901	superpathway of glucose and xylose degradation
AYP_RS09670	PWY-7013	L-1,2-propanediol degradation
AYP_RS09670	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AYP_RS09670	PWY-7118	chitin degradation to ethanol
AYP_RS09670	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AYP_RS09670	PWY-7798	AYP_RS09670
AYP_RS09855	PWY-5381	pyridine nucleotide cycling (plants)
AYP_RS09855	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AYP_RS09855	PWY-6596	adenosine nucleotides degradation I
AYP_RS09855	PWY-6606	guanosine nucleotides degradation II
AYP_RS09855	PWY-6607	guanosine nucleotides degradation I
AYP_RS09855	PWY-6608	guanosine nucleotides degradation III
AYP_RS09855	PWY-7185	UTP and CTP dephosphorylation I
AYP_RS09855	PWY-7821	AYP_RS09855
AYP_RS09890	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AYP_RS09960	PWY-2201	folate transformations I
AYP_RS09960	PWY-3841	folate transformations II
AYP_RS09970	PWY-5381	pyridine nucleotide cycling (plants)
AYP_RS10060	PWY-5101	L-isoleucine biosynthesis II
AYP_RS10060	PWY-5103	L-isoleucine biosynthesis III
AYP_RS10060	PWY-5104	L-isoleucine biosynthesis IV
AYP_RS10060	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AYP_RS10210	PWY-7165	L-ascorbate biosynthesis VI (engineered pathway)
AYP_RS10290	PWY-5451	acetone degradation I (to methylglyoxal)
AYP_RS10290	PWY-6588	pyruvate fermentation to acetone
AYP_RS10290	PWY-6876	isopropanol biosynthesis
AYP_RS10290	PWY-7466	acetone degradation III (to propane-1,2-diol)
AYP_RS10310	PWY-5451	acetone degradation I (to methylglyoxal)
AYP_RS10310	PWY-6588	pyruvate fermentation to acetone
AYP_RS10310	PWY-6876	isopropanol biosynthesis
AYP_RS10310	PWY-7466	acetone degradation III (to propane-1,2-diol)
AYP_RS10385	PWY-5101	L-isoleucine biosynthesis II
AYP_RS10385	PWY-5103	L-isoleucine biosynthesis III
AYP_RS10385	PWY-5104	L-isoleucine biosynthesis IV
AYP_RS10385	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AYP_RS10405	PWY-1042	glycolysis IV (plant cytosol)
AYP_RS10405	PWY-1622	formaldehyde assimilation I (serine pathway)
AYP_RS10405	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AYP_RS10405	PWY-5484	glycolysis II (from fructose 6-phosphate)
AYP_RS10405	PWY-5723	Rubisco shunt
AYP_RS10405	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AYP_RS10405	PWY-6886	1-butanol autotrophic biosynthesis
AYP_RS10405	PWY-6901	superpathway of glucose and xylose degradation
AYP_RS10405	PWY-7003	glycerol degradation to butanol
AYP_RS10405	PWY-7124	ethylene biosynthesis V (engineered)
AYP_RS10405	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AYP_RS10410	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
AYP_RS10430	PWY-1361	benzoyl-CoA degradation I (aerobic)
AYP_RS10430	PWY-2361	3-oxoadipate degradation
AYP_RS10430	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
AYP_RS10435	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
AYP_RS10505	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AYP_RS10590	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AYP_RS10590	PWY-6416	quinate degradation II
AYP_RS10590	PWY-6707	gallate biosynthesis
AYP_RS10615	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
AYP_RS10620	PWY-6123	inosine-5'-phosphate biosynthesis I
AYP_RS10620	PWY-6124	inosine-5'-phosphate biosynthesis II
AYP_RS10620	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AYP_RS10620	PWY-7234	inosine-5'-phosphate biosynthesis III
AYP_RS10625	PWY-1361	benzoyl-CoA degradation I (aerobic)
AYP_RS10625	PWY-2361	3-oxoadipate degradation
AYP_RS10625	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
AYP_RS10640	PWY-7560	methylerythritol phosphate pathway II
AYP_RS10655	PWY-1042	glycolysis IV (plant cytosol)
AYP_RS10655	PWY-1622	formaldehyde assimilation I (serine pathway)
AYP_RS10655	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AYP_RS10655	PWY-5484	glycolysis II (from fructose 6-phosphate)
AYP_RS10655	PWY-5723	Rubisco shunt
AYP_RS10655	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AYP_RS10655	PWY-6886	1-butanol autotrophic biosynthesis
AYP_RS10655	PWY-6901	superpathway of glucose and xylose degradation
AYP_RS10655	PWY-7003	glycerol degradation to butanol
AYP_RS10655	PWY-7124	ethylene biosynthesis V (engineered)
AYP_RS10655	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AYP_RS10660	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AYP_RS10660	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AYP_RS10665	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
AYP_RS10665	PWY-7177	UTP and CTP dephosphorylation II
AYP_RS10665	PWY-7185	UTP and CTP dephosphorylation I
AYP_RS10710	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AYP_RS10710	PWY-6164	3-dehydroquinate biosynthesis I
AYP_RS10710	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AYP_RS10735	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AYP_RS10735	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AYP_RS10750	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AYP_RS10750	PWY-5723	Rubisco shunt
AYP_RS10770	PWY-6803	phosphatidylcholine acyl editing
AYP_RS10770	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
AYP_RS10770	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
AYP_RS10770	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
AYP_RS10770	PWY-7783	AYP_RS10770
AYP_RS10820	PWY-7545	pyruvate to cytochrome <i>bd</i> terminal oxidase electron transfer
AYP_RS10895	PWY-7799	AYP_RS10895
AYP_RS10895	PWY-7800	AYP_RS10895
AYP_RS10935	PWY-6619	adenine and adenosine salvage VI
AYP_RS10965	PWY-7165	L-ascorbate biosynthesis VI (engineered pathway)
AYP_RS11000	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
AYP_RS11000	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
AYP_RS11065	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AYP_RS11065	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AYP_RS11065	PWY-5989	stearate biosynthesis II (bacteria and plants)
AYP_RS11065	PWY-5994	palmitate biosynthesis I (animals and fungi)
AYP_RS11065	PWY-6113	superpathway of mycolate biosynthesis
AYP_RS11065	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AYP_RS11065	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AYP_RS11065	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AYP_RS11065	PWY-7663	gondoate biosynthesis (anaerobic)
AYP_RS11065	PWY-7664	oleate biosynthesis IV (anaerobic)
AYP_RS11065	PWY-7858	AYP_RS11065
AYP_RS11065	PWYG-321	mycolate biosynthesis
AYP_RS11090	PWY-7294	xylose degradation IV
AYP_RS11090	PWY-7295	L-arabinose degradation IV
AYP_RS11090	PWY-7560	methylerythritol phosphate pathway II
AYP_RS11095	PWY-5667	CDP-diacylglycerol biosynthesis I
AYP_RS11095	PWY-5981	CDP-diacylglycerol biosynthesis III
AYP_RS11095	PWY-7817	AYP_RS11095
AYP_RS11135	PWY-4981	L-proline biosynthesis II (from arginine)
AYP_RS11135	PWY-4984	urea cycle
AYP_RS11135	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AYP_RS11145	PWY-7560	methylerythritol phosphate pathway II
AYP_RS11180	PWY-5392	reductive TCA cycle II
AYP_RS11180	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AYP_RS11180	PWY-5690	TCA cycle II (plants and fungi)
AYP_RS11180	PWY-5913	TCA cycle VI (obligate autotrophs)
AYP_RS11180	PWY-6728	methylaspartate cycle
AYP_RS11180	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AYP_RS11180	PWY-7254	TCA cycle VII (acetate-producers)
AYP_RS11180	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AYP_RS11225	PWY-6823	molybdenum cofactor biosynthesis
AYP_RS11235	PWY-6823	molybdenum cofactor biosynthesis
AYP_RS11255	PWY-5964	guanylyl molybdenum cofactor biosynthesis
AYP_RS11255	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
AYP_RS11270	PWY-6683	sulfate reduction III (assimilatory)
AYP_RS11300	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AYP_RS11300	PWY-6416	quinate degradation II
AYP_RS11300	PWY-6707	gallate biosynthesis
AYP_RS11675	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AYP_RS11675	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AYP_RS11700	PWY-7782	AYP_RS11700
AYP_RS11700	PWY-7783	AYP_RS11700
AYP_RS11750	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AYP_RS11750	PWY-5723	Rubisco shunt
AYP_RS11880	PWY-3461	L-tyrosine biosynthesis II
AYP_RS11880	PWY-3462	L-phenylalanine biosynthesis II
AYP_RS11880	PWY-6120	L-tyrosine biosynthesis III
AYP_RS11880	PWY-6627	salinosporamide A biosynthesis
AYP_RS11880	PWY-7626	bacilysin biosynthesis
AYP_RS11915	PWY-6897	thiamin salvage II
AYP_RS11915	PWY-7356	thiamin salvage IV (yeast)
AYP_RS11915	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AYP_RS11975	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AYP_RS12010	PWY-2781	<i>cis</i>-zeatin biosynthesis
AYP_RS12085	PWY-5747	2-methylcitrate cycle II
AYP_RS12125	PWY-381	nitrate reduction II (assimilatory)
AYP_RS12125	PWY-5675	nitrate reduction V (assimilatory)
AYP_RS12125	PWY-6549	L-glutamine biosynthesis III
AYP_RS12125	PWY-6963	ammonia assimilation cycle I
AYP_RS12125	PWY-6964	ammonia assimilation cycle II
AYP_RS12155	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AYP_RS12155	PWY-6148	tetrahydromethanopterin biosynthesis
AYP_RS12155	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AYP_RS12155	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AYP_RS12155	PWY-7852	AYP_RS12155
AYP_RS12155	PWY-7853	AYP_RS12155
AYP_RS12160	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AYP_RS12160	PWY-6148	tetrahydromethanopterin biosynthesis
AYP_RS12160	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AYP_RS12160	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AYP_RS12280	PWY-5484	glycolysis II (from fructose 6-phosphate)
AYP_RS12295	PWY-3781	aerobic respiration I (cytochrome c)
AYP_RS12295	PWY-4521	arsenite oxidation I (respiratory)
AYP_RS12295	PWY-6692	Fe(II) oxidation
AYP_RS12295	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AYP_RS12295	PWY-7544	pyruvate to cytochrome <i>bo</i> oxidase electron transfer
AYP_RS12335	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AYP_RS12390	PWY-6123	inosine-5'-phosphate biosynthesis I
AYP_RS12390	PWY-6124	inosine-5'-phosphate biosynthesis II
AYP_RS12390	PWY-7234	inosine-5'-phosphate biosynthesis III
AYP_RS12395	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AYP_RS12395	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AYP_RS12395	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AYP_RS12415	PWY-5386	methylglyoxal degradation I
AYP_RS12455	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AYP_RS12455	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AYP_RS12485	PWY-5913	TCA cycle VI (obligate autotrophs)
AYP_RS12485	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
AYP_RS12485	PWY-6638	sulfolactate degradation III
AYP_RS12485	PWY-6642	(<i>R</i>)-cysteate degradation
AYP_RS12485	PWY-6643	coenzyme M biosynthesis II
AYP_RS12485	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AYP_RS12485	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AYP_RS12485	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AYP_RS12640	PWY-5642	2,4-dinitrotoluene degradation
AYP_RS12640	PWY-6373	acrylate degradation
AYP_RS12685	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
AYP_RS12685	PWY-5368	dimorphecolate biosynthesis
AYP_RS12685	PWY-5995	linoleate biosynthesis I (plants)
AYP_RS12685	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
AYP_RS12685	PWY-6803	phosphatidylcholine acyl editing
AYP_RS12685	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
AYP_RS12685	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
AYP_RS12685	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
AYP_RS12685	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
AYP_RS12685	PWY-7470	phosphatidylcholine biosynthesis VII
AYP_RS12685	PWY-7618	ricinoleate biosynthesis
AYP_RS12720	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AYP_RS12720	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AYP_RS12720	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AYP_RS12720	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AYP_RS12730	PWY-5686	UMP biosynthesis
AYP_RS12750	PWY-5667	CDP-diacylglycerol biosynthesis I
AYP_RS12750	PWY-5981	CDP-diacylglycerol biosynthesis III
AYP_RS12795	PWY-6891	thiazole biosynthesis II (Bacillus)
AYP_RS12795	PWY-6892	thiazole biosynthesis I (E. coli)
AYP_RS12830	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AYP_RS12830	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
AYP_RS12835	PWY-3461	L-tyrosine biosynthesis II
AYP_RS12835	PWY-3462	L-phenylalanine biosynthesis II
AYP_RS12835	PWY-6120	L-tyrosine biosynthesis III
AYP_RS12835	PWY-6627	salinosporamide A biosynthesis
AYP_RS12835	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
AYP_RS12835	PWY-7626	bacilysin biosynthesis
AYP_RS12870	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AYP_RS12870	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AYP_RS12870	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
AYP_RS12875	PWY-1001	cellulose biosynthesis
AYP_RS12875	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AYP_RS12875	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AYP_RS12875	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AYP_RS12875	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AYP_RS12885	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AYP_RS12885	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AYP_RS12885	PWY-6897	thiamin salvage II
AYP_RS12885	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
AYP_RS12885	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
AYP_RS12885	PWY-7356	thiamin salvage IV (yeast)
AYP_RS12885	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AYP_RS12995	PWY-1622	formaldehyde assimilation I (serine pathway)
AYP_RS12995	PWY-181	photorespiration
AYP_RS12995	PWY-2161	folate polyglutamylation
AYP_RS12995	PWY-2201	folate transformations I
AYP_RS12995	PWY-3661	glycine betaine degradation I
AYP_RS12995	PWY-3661-1	glycine betaine degradation II (mammalian)
AYP_RS12995	PWY-3841	folate transformations II
AYP_RS12995	PWY-5497	purine nucleobases degradation II (anaerobic)
AYP_RS13005	PWY-6857	retinol biosynthesis
AYP_RS13035	PWY-6700	queuosine biosynthesis
AYP_RS13095	PWY-7799	AYP_RS13095
AYP_RS13095	PWY-7800	AYP_RS13095
AYP_RS13120	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AYP_RS13120	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AYP_RS13140	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AYP_RS13145	PWY-2201	folate transformations I
AYP_RS13145	PWY-3841	folate transformations II
AYP_RS13150	PWY-2201	folate transformations I
AYP_RS13160	PWY-1281	sulfoacetaldehyde degradation I
AYP_RS13160	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AYP_RS13160	PWY-5482	pyruvate fermentation to acetate II
AYP_RS13160	PWY-5485	pyruvate fermentation to acetate IV
AYP_RS13160	PWY-5497	purine nucleobases degradation II (anaerobic)
AYP_RS13160	PWY-6637	sulfolactate degradation II
AYP_RS13160	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AYP_RS13180	PWY-6854	ethylene biosynthesis III (microbes)
AYP_RS13210	PWY-6857	retinol biosynthesis
AYP_RS13220	PWY-5755	4-hydroxybenzoate biosynthesis II (microbes)
AYP_RS13220	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
AYP_RS13220	PWY-6148	tetrahydromethanopterin biosynthesis
AYP_RS13220	PWY-7742	AYP_RS13220
AYP_RS13220	PWY-7745	AYP_RS13220
AYP_RS13225	PWY-381	nitrate reduction II (assimilatory)
AYP_RS13225	PWY-5675	nitrate reduction V (assimilatory)
AYP_RS13225	PWY-6549	L-glutamine biosynthesis III
AYP_RS13225	PWY-6963	ammonia assimilation cycle I
AYP_RS13225	PWY-6964	ammonia assimilation cycle II
AYP_RS13240	PWY-5958	acridone alkaloid biosynthesis
AYP_RS13240	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AYP_RS13240	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AYP_RS13300	PWY-5497	purine nucleobases degradation II (anaerobic)
AYP_RS13300	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AYP_RS13300	PWY-6538	caffeine degradation III (bacteria, via demethylation)
AYP_RS13300	PWY-6596	adenosine nucleotides degradation I
AYP_RS13300	PWY-6606	guanosine nucleotides degradation II
AYP_RS13300	PWY-6607	guanosine nucleotides degradation I
AYP_RS13300	PWY-6608	guanosine nucleotides degradation III
AYP_RS13300	PWY-6999	theophylline degradation
AYP_RS13305	PWY-5497	purine nucleobases degradation II (anaerobic)
AYP_RS13305	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AYP_RS13305	PWY-6538	caffeine degradation III (bacteria, via demethylation)
AYP_RS13305	PWY-6596	adenosine nucleotides degradation I
AYP_RS13305	PWY-6606	guanosine nucleotides degradation II
AYP_RS13305	PWY-6607	guanosine nucleotides degradation I
AYP_RS13305	PWY-6608	guanosine nucleotides degradation III
AYP_RS13305	PWY-6999	theophylline degradation
AYP_RS13310	PWY-5663	tetrahydrobiopterin biosynthesis I
AYP_RS13310	PWY-5664	tetrahydrobiopterin biosynthesis II
AYP_RS13310	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AYP_RS13310	PWY-6703	preQ<sub>0</sub> biosynthesis
AYP_RS13310	PWY-6983	tetrahydrobiopterin biosynthesis III
AYP_RS13310	PWY-7442	drosopterin and aurodrosopterin biosynthesis
AYP_RS13310	PWY-7852	AYP_RS13310
AYP_RS13340	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
AYP_RS13340	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
AYP_RS13340	PWY-7766	AYP_RS13340
AYP_RS13350	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AYP_RS13350	PWY-5901	2,3-dihydroxybenzoate biosynthesis
AYP_RS13350	PWY-6406	salicylate biosynthesis I
AYP_RS13355	PWY-6012	acyl carrier protein metabolism I
AYP_RS13355	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
AYP_RS13380	PWY-6173	histamine biosynthesis
AYP_RS13385	PWY-5901	2,3-dihydroxybenzoate biosynthesis
AYP_RS13485	PWY-1042	glycolysis IV (plant cytosol)
AYP_RS13485	PWY-1622	formaldehyde assimilation I (serine pathway)
AYP_RS13485	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AYP_RS13485	PWY-5484	glycolysis II (from fructose 6-phosphate)
AYP_RS13485	PWY-5723	Rubisco shunt
AYP_RS13485	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AYP_RS13485	PWY-6886	1-butanol autotrophic biosynthesis
AYP_RS13485	PWY-6901	superpathway of glucose and xylose degradation
AYP_RS13485	PWY-7003	glycerol degradation to butanol
AYP_RS13485	PWY-7124	ethylene biosynthesis V (engineered)
AYP_RS13485	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AYP_RS13565	PWY-5642	2,4-dinitrotoluene degradation
AYP_RS13565	PWY-6373	acrylate degradation
AYP_RS13570	PWY-5692	allantoin degradation to glyoxylate II
AYP_RS13570	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
AYP_RS13655	PWY-5386	methylglyoxal degradation I
AYP_RS13680	PWY-5381	pyridine nucleotide cycling (plants)
AYP_RS13680	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AYP_RS13680	PWY-6596	adenosine nucleotides degradation I
AYP_RS13680	PWY-6606	guanosine nucleotides degradation II
AYP_RS13680	PWY-6607	guanosine nucleotides degradation I
AYP_RS13680	PWY-6608	guanosine nucleotides degradation III
AYP_RS13680	PWY-7185	UTP and CTP dephosphorylation I
AYP_RS13680	PWY-7821	AYP_RS13680
AYP_RS13695	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AYP_RS13695	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AYP_RS13720	PWY-6123	inosine-5'-phosphate biosynthesis I
AYP_RS13720	PWY-6124	inosine-5'-phosphate biosynthesis II
AYP_RS13720	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AYP_RS13720	PWY-7234	inosine-5'-phosphate biosynthesis III
AYP_RS13785	PWY-6409	pyoverdine I biosynthesis
AYP_RS13785	PWY-6562	norspermidine biosynthesis
AYP_RS13785	PWY-761	rhizobactin 1021 biosynthesis
AYP_RS13785	PWY-7855	AYP_RS13785
AYP_RS13840	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AYP_RS13845	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AYP_RS13845	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AYP_RS13845	PWY-6897	thiamin salvage II
AYP_RS13845	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
AYP_RS13845	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
AYP_RS13845	PWY-7356	thiamin salvage IV (yeast)
AYP_RS13845	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AYP_RS13910	PWY-5913	TCA cycle VI (obligate autotrophs)
AYP_RS13910	PWY-6549	L-glutamine biosynthesis III
AYP_RS13910	PWY-6728	methylaspartate cycle
AYP_RS13910	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AYP_RS13910	PWY-7124	ethylene biosynthesis V (engineered)
AYP_RS13910	PWY-7254	TCA cycle VII (acetate-producers)
AYP_RS13910	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AYP_RS13920	PWY-5913	TCA cycle VI (obligate autotrophs)
AYP_RS13920	PWY-6549	L-glutamine biosynthesis III
AYP_RS13920	PWY-6728	methylaspartate cycle
AYP_RS13920	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AYP_RS13920	PWY-7124	ethylene biosynthesis V (engineered)
AYP_RS13920	PWY-7254	TCA cycle VII (acetate-producers)
AYP_RS13920	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AYP_RS13930	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AYP_RS13930	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AYP_RS13990	PWY-723	alkylnitronates degradation
AYP_RS14340	PWY-3341	L-proline biosynthesis III
AYP_RS14340	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AYP_RS14360	PWY-1042	glycolysis IV (plant cytosol)
AYP_RS14360	PWY-5484	glycolysis II (from fructose 6-phosphate)
AYP_RS14360	PWY-6901	superpathway of glucose and xylose degradation
AYP_RS14360	PWY-7003	glycerol degradation to butanol
AYP_RS14400	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AYP_RS14485	PWY-5316	nicotine biosynthesis
AYP_RS14485	PWY-7342	superpathway of nicotine biosynthesis
AYP_RS14495	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AYP_RS14495	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AYP_RS14495	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AYP_RS14495	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
AYP_RS14495	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AYP_RS14495	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AYP_RS14505	PWY-6543	4-aminobenzoate biosynthesis
AYP_RS14550	PWY-6703	preQ<sub>0</sub> biosynthesis
AYP_RS14555	PWY-6703	preQ<sub>0</sub> biosynthesis
AYP_RS14565	PWY-6482	diphthamide biosynthesis (archaea)
AYP_RS14565	PWY-7546	diphthamide biosynthesis (eukaryotes)
AYP_RS14600	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AYP_RS14600	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AYP_RS14600	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AYP_RS14660	PWY-5484	glycolysis II (from fructose 6-phosphate)
AYP_RS14705	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AYP_RS14705	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AYP_RS14705	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AYP_RS14710	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AYP_RS14710	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
AYP_RS14830	PWY-2941	L-lysine biosynthesis II
AYP_RS14830	PWY-5097	L-lysine biosynthesis VI
AYP_RS14835	PWY-2941	L-lysine biosynthesis II
AYP_RS14835	PWY-2942	L-lysine biosynthesis III
AYP_RS14835	PWY-5097	L-lysine biosynthesis VI
AYP_RS14865	PWY-181	photorespiration
AYP_RS14930	PWY-2582	brassinosteroid biosynthesis II
AYP_RS14930	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AYP_RS14930	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AYP_RS14930	PWY-6948	sitosterol degradation to androstenedione
AYP_RS14930	PWY-699	brassinosteroid biosynthesis I
AYP_RS14930	PWY-7299	progesterone biosynthesis
AYP_RS14995	PWY-7039	phosphatidate metabolism, as a signaling molecule
AYP_RS14995	PWY-7817	AYP_RS14995
AYP_RS15025	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AYP_RS15030	PWY-4261	glycerol degradation I
AYP_RS15030	PWY-6118	glycerol-3-phosphate shuttle
AYP_RS15030	PWY-6952	glycerophosphodiester degradation
AYP_RS15035	PWY-4261	glycerol degradation I
AYP_RS15055	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
AYP_RS15055	PWY-2201	folate transformations I
AYP_RS15055	PWY-3841	folate transformations II
AYP_RS15055	PWY-5030	L-histidine degradation III
AYP_RS15055	PWY-5497	purine nucleobases degradation II (anaerobic)
AYP_RS15055	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
AYP_RS15090	PWY-6614	tetrahydrofolate biosynthesis
AYP_RS15120	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AYP_RS15120	PWY-5686	UMP biosynthesis
AYP_RS15120	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AYP_RS15120	PWY-7790	AYP_RS15120
AYP_RS15120	PWY-7791	AYP_RS15120
AYP_RS15125	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AYP_RS15125	PWY-5686	UMP biosynthesis
AYP_RS15125	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AYP_RS15125	PWY-7790	AYP_RS15125
AYP_RS15125	PWY-7791	AYP_RS15125
AYP_RS15210	PWY-5392	reductive TCA cycle II
AYP_RS15210	PWY-5537	pyruvate fermentation to acetate V
AYP_RS15210	PWY-5538	pyruvate fermentation to acetate VI
AYP_RS15210	PWY-5690	TCA cycle II (plants and fungi)
AYP_RS15210	PWY-5913	TCA cycle VI (obligate autotrophs)
AYP_RS15210	PWY-6728	methylaspartate cycle
AYP_RS15210	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AYP_RS15210	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AYP_RS15215	PWY-5392	reductive TCA cycle II
AYP_RS15215	PWY-5537	pyruvate fermentation to acetate V
AYP_RS15215	PWY-5538	pyruvate fermentation to acetate VI
AYP_RS15215	PWY-5690	TCA cycle II (plants and fungi)
AYP_RS15215	PWY-5913	TCA cycle VI (obligate autotrophs)
AYP_RS15215	PWY-6728	methylaspartate cycle
AYP_RS15215	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AYP_RS15215	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AYP_RS15220	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
AYP_RS15220	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AYP_RS15225	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AYP_RS15230	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AYP_RS15245	PWY-3781	aerobic respiration I (cytochrome c)
AYP_RS15245	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AYP_RS15245	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AYP_RS15245	PWY-5690	TCA cycle II (plants and fungi)
AYP_RS15245	PWY-6728	methylaspartate cycle
AYP_RS15245	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AYP_RS15245	PWY-7254	TCA cycle VII (acetate-producers)
AYP_RS15245	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AYP_RS15250	PWY-3781	aerobic respiration I (cytochrome c)
AYP_RS15250	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AYP_RS15250	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AYP_RS15250	PWY-5690	TCA cycle II (plants and fungi)
AYP_RS15250	PWY-6728	methylaspartate cycle
AYP_RS15250	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AYP_RS15250	PWY-7254	TCA cycle VII (acetate-producers)
AYP_RS15250	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AYP_RS15310	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AYP_RS15310	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AYP_RS15340	PWY-6004	glycine betaine biosynthesis V (from glycine)
AYP_RS15345	PWY-5194	siroheme biosynthesis
AYP_RS15345	PWY-5196	factor 430 biosynthesis
AYP_RS15345	PWY-5441	S-methyl-L-methionine cycle
AYP_RS15345	PWY-702	L-methionine biosynthesis II
AYP_RS15345	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AYP_RS15350	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
AYP_RS15560	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
AYP_RS15650	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AYP_RS15945	PWY-6825	phosphatidylcholine biosynthesis V
AYP_RS16000	PWY-6683	sulfate reduction III (assimilatory)
AYP_RS16030	PWY-1361	benzoyl-CoA degradation I (aerobic)
AYP_RS16030	PWY-5109	2-methylbutanoate biosynthesis
AYP_RS16030	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AYP_RS16030	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AYP_RS16030	PWY-5177	glutaryl-CoA degradation
AYP_RS16030	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AYP_RS16030	PWY-6435	4-hydroxybenzoate biosynthesis V
AYP_RS16030	PWY-6583	pyruvate fermentation to butanol I
AYP_RS16030	PWY-6863	pyruvate fermentation to hexanol
AYP_RS16030	PWY-6883	pyruvate fermentation to butanol II
AYP_RS16030	PWY-6944	androstenedione degradation
AYP_RS16030	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AYP_RS16030	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AYP_RS16030	PWY-7007	methyl ketone biosynthesis
AYP_RS16030	PWY-7046	4-coumarate degradation (anaerobic)
AYP_RS16030	PWY-7094	fatty acid salvage
AYP_RS16030	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AYP_RS16030	PWY-735	jasmonic acid biosynthesis
AYP_RS16030	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AYP_RS16030	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AYP_RS16030	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AYP_RS16030	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
AYP_RS16030	PWY-7726	AYP_RS16030
AYP_RS16030	PWY-7778	AYP_RS16030
AYP_RS16030	PWY-7779	AYP_RS16030
AYP_RS16030	PWY-81	toluene degradation to benzoyl-CoA (anaerobic)
AYP_RS16095	PWY-2161	folate polyglutamylation
AYP_RS16100	PWY-6679	jadomycin biosynthesis
AYP_RS16100	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AYP_RS16145	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AYP_RS16145	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AYP_RS16145	PWY-6268	adenosylcobalamin salvage from cobalamin
AYP_RS16145	PWY-6269	adenosylcobalamin salvage from cobinamide II
AYP_RS16160	PWY-5987	sorgoleone biosynthesis
AYP_RS16160	PWY-5996	oleate biosynthesis II (animals and fungi)
AYP_RS16290	PWY-5057	L-valine degradation II
AYP_RS16290	PWY-5076	L-leucine degradation III
AYP_RS16290	PWY-5078	L-isoleucine degradation II
AYP_RS16290	PWY-5101	L-isoleucine biosynthesis II
AYP_RS16290	PWY-5103	L-isoleucine biosynthesis III
AYP_RS16290	PWY-5104	L-isoleucine biosynthesis IV
AYP_RS16290	PWY-5108	L-isoleucine biosynthesis V
AYP_RS16290	PWY-7767	AYP_RS16290
AYP_RS16330	PWY-6700	queuosine biosynthesis
AYP_RS16345	PWY-6700	queuosine biosynthesis
AYP_RS16365	PWY-7851	AYP_RS16365
AYP_RS16910	PWY-7294	xylose degradation IV
AYP_RS16910	PWY-7295	L-arabinose degradation IV
AYP_RS16955	PWY-6679	jadomycin biosynthesis
AYP_RS16955	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AYP_RS17020	PWY-5669	phosphatidylethanolamine biosynthesis I
AYP_RS17050	PWY-1622	formaldehyde assimilation I (serine pathway)
AYP_RS17050	PWY-5392	reductive TCA cycle II
AYP_RS17050	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AYP_RS17050	PWY-5690	TCA cycle II (plants and fungi)
AYP_RS17050	PWY-5913	TCA cycle VI (obligate autotrophs)
AYP_RS17050	PWY-6728	methylaspartate cycle
AYP_RS17050	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AYP_RS17050	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AYP_RS17050	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AYP_RS17100	PWY-7731	AYP_RS17100
AYP_RS17405	PWY-5667	CDP-diacylglycerol biosynthesis I
AYP_RS17405	PWY-6453	stigma estolide biosynthesis
AYP_RS17405	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
AYP_RS17405	PWY-7587	oleate biosynthesis III (cyanobacteria)
AYP_RS17480	PWY-6891	thiazole biosynthesis II (Bacillus)
AYP_RS17480	PWY-6892	thiazole biosynthesis I (E. coli)
AYP_RS17480	PWY-7560	methylerythritol phosphate pathway II
AYP_RS17485	PWY-6168	flavin biosynthesis III (fungi)
AYP_RS17485	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AYP_RS17490	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
AYP_RS17495	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AYP_RS17665	PWY-6854	ethylene biosynthesis III (microbes)
AYP_RS17750	PWY-6829	tRNA methylation (yeast)
AYP_RS17750	PWY-7285	methylwyosine biosynthesis
AYP_RS17750	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
AYP_RS17800	PWY-7560	methylerythritol phosphate pathway II
AYP_RS17805	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AYP_RS17885	PWY-6164	3-dehydroquinate biosynthesis I
AYP_RS17890	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AYP_RS17935	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AYP_RS17935	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AYP_RS17935	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AYP_RS17940	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AYP_RS17940	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AYP_RS17960	PWY-2201	folate transformations I
AYP_RS17975	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AYP_RS18050	PWY-6825	phosphatidylcholine biosynthesis V
AYP_RS18090	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AYP_RS18090	PWY-5743	3-hydroxypropanoate cycle
AYP_RS18090	PWY-5744	glyoxylate assimilation
AYP_RS18090	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AYP_RS18090	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AYP_RS18090	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AYP_RS18090	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AYP_RS18190	PWY-702	L-methionine biosynthesis II
AYP_RS18335	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AYP_RS18415	PWY-6899	base-degraded thiamin salvage
AYP_RS18415	PWY-7356	thiamin salvage IV (yeast)
AYP_RS18495	PWY-7723	AYP_RS18495
AYP_RS18520	PWY-5132	humulone biosynthesis
AYP_RS18520	PWY-5133	cohumulone biosynthesis
AYP_RS18520	PWY-6672	<i>cis</i>-genanyl-CoA degradation
AYP_RS18520	PWY-7118	chitin degradation to ethanol
AYP_RS18520	PWY-7857	AYP_RS18520
AYP_RS18535	PWY-2201	folate transformations I
AYP_RS18540	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
AYP_RS18565	PWY-7805	AYP_RS18565
AYP_RS18565	PWY-7807	AYP_RS18565
AYP_RS18570	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AYP_RS18570	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AYP_RS18575	PWY-6749	CMP-legionaminate biosynthesis I
AYP_RS18580	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AYP_RS18580	PWY-6596	adenosine nucleotides degradation I
AYP_RS18580	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AYP_RS18615	PWY-6891	thiazole biosynthesis II (Bacillus)
AYP_RS18615	PWY-6892	thiazole biosynthesis I (E. coli)
AYP_RS18615	PWY-7560	methylerythritol phosphate pathway II
AYP_RS18630	PWY-2201	folate transformations I
AYP_RS18630	PWY-5497	purine nucleobases degradation II (anaerobic)
AYP_RS18650	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AYP_RS18650	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AYP_RS18655	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AYP_RS18655	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AYP_RS18660	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AYP_RS18660	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AYP_RS18660	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AYP_RS18660	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AYP_RS18680	PWY-5686	UMP biosynthesis
AYP_RS18680	PWY-7790	AYP_RS18680
AYP_RS18680	PWY-7791	AYP_RS18680
AYP_RS18735	PWY-5691	urate degradation to allantoin I
AYP_RS18735	PWY-7394	urate degradation to allantoin II
AYP_RS18735	PWY-7849	AYP_RS18735
AYP_RS18740	PWY-5691	urate degradation to allantoin I
AYP_RS18740	PWY-7394	urate degradation to allantoin II
AYP_RS18740	PWY-7849	AYP_RS18740
AYP_RS18760	PWY-5697	allantoin degradation to ureidoglycolate I (urea producing)
AYP_RS18765	PWY-5694	allantoin degradation to glyoxylate I
AYP_RS18765	PWY-5705	allantoin degradation to glyoxylate III
AYP_RS18810	PWY-6840	homoglutathione biosynthesis
AYP_RS18810	PWY-7255	ergothioneine biosynthesis I (bacteria)
AYP_RS18860	PWY-6857	retinol biosynthesis
AYP_RS18880	PWY-5669	phosphatidylethanolamine biosynthesis I
AYP_RS18885	PWY-5350	thiosulfate disproportionation III (rhodanese)
AYP_RS18890	PWY-5381	pyridine nucleotide cycling (plants)
AYP_RS18925	PWY-6167	flavin biosynthesis II (archaea)
AYP_RS18925	PWY-6168	flavin biosynthesis III (fungi)
AYP_RS18925	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AYP_RS18930	PWY-6167	flavin biosynthesis II (archaea)
AYP_RS18930	PWY-6168	flavin biosynthesis III (fungi)
AYP_RS18940	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AYP_RS18940	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AYP_RS18940	PWY-6896	thiamin salvage I
AYP_RS18940	PWY-6897	thiamin salvage II
AYP_RS18945	PWY-5269	cardiolipin biosynthesis II
AYP_RS18945	PWY-5668	cardiolipin biosynthesis I
AYP_RS18945	PWY-7817	AYP_RS18945
AYP_RS18950	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AYP_RS18950	PWY-5667	CDP-diacylglycerol biosynthesis I
AYP_RS18950	PWY-6453	stigma estolide biosynthesis
AYP_RS18950	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
AYP_RS18950	PWY-7587	oleate biosynthesis III (cyanobacteria)
AYP_RS18955	PWY-6749	CMP-legionaminate biosynthesis I
AYP_RS18960	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AYP_RS18960	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AYP_RS18980	PWY-5028	L-histidine degradation II
AYP_RS18980	PWY-5030	L-histidine degradation III
AYP_RS18990	PWY-5028	L-histidine degradation II
AYP_RS18990	PWY-5030	L-histidine degradation III
AYP_RS18995	PWY-5028	L-histidine degradation II
AYP_RS18995	PWY-5030	L-histidine degradation III
AYP_RS19020	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AYP_RS19075	PWY-2941	L-lysine biosynthesis II
AYP_RS19075	PWY-2942	L-lysine biosynthesis III
AYP_RS19075	PWY-5097	L-lysine biosynthesis VI
AYP_RS19085	PWY-6123	inosine-5'-phosphate biosynthesis I
AYP_RS19085	PWY-6124	inosine-5'-phosphate biosynthesis II
AYP_RS19085	PWY-7234	inosine-5'-phosphate biosynthesis III
AYP_RS19190	PWY-2941	L-lysine biosynthesis II
AYP_RS19190	PWY-2942	L-lysine biosynthesis III
AYP_RS19190	PWY-5097	L-lysine biosynthesis VI
AYP_RS19225	PWY-1622	formaldehyde assimilation I (serine pathway)
AYP_RS19225	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AYP_RS19225	PWY-5913	TCA cycle VI (obligate autotrophs)
AYP_RS19225	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AYP_RS19225	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
AYP_RS19225	PWY-6549	L-glutamine biosynthesis III
AYP_RS19225	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AYP_RS19225	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AYP_RS19225	PWY-7124	ethylene biosynthesis V (engineered)
AYP_RS19250	PWY-5101	L-isoleucine biosynthesis II
AYP_RS19250	PWY-5103	L-isoleucine biosynthesis III
AYP_RS19250	PWY-5104	L-isoleucine biosynthesis IV
AYP_RS19250	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AYP_RS19260	PWY-6825	phosphatidylcholine biosynthesis V
AYP_RS19375	PWY-6123	inosine-5'-phosphate biosynthesis I
AYP_RS19375	PWY-7234	inosine-5'-phosphate biosynthesis III
AYP_RS19425	PWY-5497	purine nucleobases degradation II (anaerobic)
AYP_RS19425	PWY-6606	guanosine nucleotides degradation II
AYP_RS19425	PWY-6608	guanosine nucleotides degradation III
AYP_RS19425	PWY-7442	drosopterin and aurodrosopterin biosynthesis
AYP_RS19430	PWY-6599	guanine and guanosine salvage II
AYP_RS19430	PWY-6609	adenine and adenosine salvage III
AYP_RS19430	PWY-6610	adenine and adenosine salvage IV
AYP_RS19430	PWY-6620	guanine and guanosine salvage
AYP_RS19690	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AYP_RS19690	PWY-3162	L-tryptophan degradation V (side chain pathway)
AYP_RS19690	PWY-5057	L-valine degradation II
AYP_RS19690	PWY-5076	L-leucine degradation III
AYP_RS19690	PWY-5078	L-isoleucine degradation II
AYP_RS19690	PWY-5079	L-phenylalanine degradation III
AYP_RS19690	PWY-5082	L-methionine degradation III
AYP_RS19690	PWY-5480	pyruvate fermentation to ethanol I
AYP_RS19690	PWY-5486	pyruvate fermentation to ethanol II
AYP_RS19690	PWY-5751	phenylethanol biosynthesis
AYP_RS19690	PWY-6313	serotonin degradation
AYP_RS19690	PWY-6333	acetaldehyde biosynthesis I
AYP_RS19690	PWY-6342	noradrenaline and adrenaline degradation
AYP_RS19690	PWY-6454	vancomycin resistance I
AYP_RS19690	PWY-6587	pyruvate fermentation to ethanol III
AYP_RS19690	PWY-6802	salidroside biosynthesis
AYP_RS19690	PWY-6871	3-methylbutanol biosynthesis
AYP_RS19690	PWY-6901	superpathway of glucose and xylose degradation
AYP_RS19690	PWY-7013	L-1,2-propanediol degradation
AYP_RS19690	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AYP_RS19690	PWY-7118	chitin degradation to ethanol
AYP_RS19690	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AYP_RS19690	PWY-7798	AYP_RS19690
AYP_RS19695	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AYP_RS19810	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AYP_RS19810	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AYP_RS19810	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AYP_RS19810	PWY-6936	seleno-amino acid biosynthesis
AYP_RS19810	PWY-702	L-methionine biosynthesis II
AYP_RS19815	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AYP_RS19815	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AYP_RS19815	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AYP_RS19815	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AYP_RS19815	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AYP_RS19815	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AYP_RS19815	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AYP_RS19815	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AYP_RS19820	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AYP_RS19820	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AYP_RS19820	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AYP_RS19820	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AYP_RS19820	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AYP_RS19820	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AYP_RS19820	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AYP_RS19820	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AYP_RS19920	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
AYP_RS19960	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis