AYP_RS00005	SM00382	ATPases associated with a variety of cellular activities
AYP_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
AYP_RS00010	SM00480	DNA polymerase III beta subunit
AYP_RS00020	SM00387	Histidine kinase-like ATPases
AYP_RS00020	SM00433	TopoisomeraseII
AYP_RS00035	SM00382	ATPases associated with a variety of cellular activities
AYP_RS00105	SM00248	ankyrin repeats
AYP_RS00130	SM00904	Riboflavin kinase
AYP_RS00150	SM00382	ATPases associated with a variety of cellular activities
AYP_RS00165	SM00062	Bacterial periplasmic substrate-binding proteins
AYP_RS00170	SM00062	Bacterial periplasmic substrate-binding proteins
AYP_RS00255	SM00644	AYP_RS00255
AYP_RS00280	SM00226	Low molecular weight phosphatase family
AYP_RS00290	SM00984	UDP binding domain
AYP_RS00320	SM00858	AYP_RS00320
AYP_RS00365	SM00984	UDP binding domain
AYP_RS00390	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AYP_RS00390	SM00895	AYP_RS00390
AYP_RS00415	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AYP_RS00415	SM00895	AYP_RS00415
AYP_RS00470	SM00825	Beta-ketoacyl synthase
AYP_RS00520	SM00344	helix_turn_helix ASNC type
AYP_RS00530	SM01005	Alanine racemase, C-terminal domain
AYP_RS00600	SM00421	helix_turn_helix, Lux Regulon
AYP_RS00615	SM00823	Phosphopantetheine attachment site
AYP_RS00615	SM01294	AYP_RS00615
AYP_RS00625	SM00823	Phosphopantetheine attachment site
AYP_RS00625	SM00824	Thioesterase
AYP_RS00740	SM00836	DALR anticodon binding domain
AYP_RS00740	SM01016	Arginyl tRNA synthetase N terminal dom
AYP_RS00745	SM00919	Malic enzyme, NAD binding domain
AYP_RS00745	SM01274	AYP_RS00745
AYP_RS00770	SM00382	ATPases associated with a variety of cellular activities
AYP_RS00820	SM00382	ATPases associated with a variety of cellular activities
AYP_RS00840	SM00342	helix_turn_helix, arabinose operon control protein
AYP_RS00955	SM00422	helix_turn_helix, mercury resistance
AYP_RS00965	SM00729	Elongator protein 3, MiaB family, Radical SAM
AYP_RS00985	SM00641	Glycosyl hydrolases family 25
AYP_RS01000	SM01091	Transporter associated domain
AYP_RS01020	SM00434	DNA Topoisomerase IV
AYP_RS01055	SM01130	AYP_RS01055
AYP_RS01060	SM01007	Class II Aldolase and Adducin N-terminal domain
AYP_RS01065	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AYP_RS01130	SM00382	ATPases associated with a variety of cellular activities
AYP_RS01225	SM00938	Nitrogen regulatory protein P-II
AYP_RS01290	SM00245	tail specific protease
AYP_RS01295	SM00382	ATPases associated with a variety of cellular activities
AYP_RS01295	SM00448	cheY-homologous receiver domain
AYP_RS01300	SM00387	Histidine kinase-like ATPases
AYP_RS01300	SM00388	His Kinase A (phosphoacceptor) domain
AYP_RS01305	SM00421	helix_turn_helix, Lux Regulon
AYP_RS01305	SM00448	cheY-homologous receiver domain
AYP_RS01335	SM00899	AYP_RS01335
AYP_RS01425	SM00448	cheY-homologous receiver domain
AYP_RS01425	SM00850	LytTr DNA-binding domain
AYP_RS01455	SM00528	Domain in histone-like proteins of HNS family
AYP_RS01465	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AYP_RS01475	SM00240	Forkhead associated domain
AYP_RS01525	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
AYP_RS01525	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AYP_RS01530	SM00649	Ribosomal protein L11/L12
AYP_RS01555	SM00663	RNA polymerase I subunit A N-terminus
AYP_RS01605	SM00387	Histidine kinase-like ATPases
AYP_RS01630	SM00422	helix_turn_helix, mercury resistance
AYP_RS01685	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AYP_RS01685	SM00465	GIY-YIG type nucleases (URI domain)
AYP_RS01700	SM00342	helix_turn_helix, arabinose operon control protein
AYP_RS01710	SM00346	helix_turn_helix isocitrate lyase regulation
AYP_RS01730	SM00732	Likely ribonuclease with RNase H fold.
AYP_RS01755	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AYP_RS01815	SM00316	Ribosomal protein S1-like RNA-binding domain
AYP_RS01920	SM00382	ATPases associated with a variety of cellular activities
AYP_RS01930	SM01387	AYP_RS01930
AYP_RS01935	SM00316	Ribosomal protein S1-like RNA-binding domain
AYP_RS01935	SM00322	K homology RNA-binding domain
AYP_RS01950	SM00271	DnaJ molecular chaperone homology domain
AYP_RS01970	SM00487	DEAD-like helicases superfamily
AYP_RS01970	SM00490	helicase superfamily c-terminal domain
AYP_RS02000	SM00116	Domain in cystathionine beta-synthase and other proteins.
AYP_RS02000	SM01091	Transporter associated domain
AYP_RS02035	SM00849	Metallo-beta-lactamase superfamily
AYP_RS02105	SM00729	Elongator protein 3, MiaB family, Radical SAM
AYP_RS02135	SM00316	Ribosomal protein S1-like RNA-binding domain
AYP_RS02145	SM00363	S4 RNA-binding domain
AYP_RS02185	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AYP_RS02235	SM01329	AYP_RS02235
AYP_RS02250	SM00316	Ribosomal protein S1-like RNA-binding domain
AYP_RS02255	SM00342	helix_turn_helix, arabinose operon control protein
AYP_RS02265	SM00870	AYP_RS02265
AYP_RS02280	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AYP_RS02310	SM00382	ATPases associated with a variety of cellular activities
AYP_RS02320	SM00829	Enoylreductase
AYP_RS02335	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AYP_RS02335	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AYP_RS02335	SM00493	AYP_RS02335
AYP_RS02355	SM00360	RNA recognition motif
AYP_RS02495	SM00671	Sel1-like repeats.
AYP_RS02510	SM00917	LeuA allosteric (dimerisation) domain
AYP_RS02515	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
AYP_RS02535	SM00382	ATPases associated with a variety of cellular activities
AYP_RS02535	SM00994	ClpX C4-type zinc finger
AYP_RS02535	SM01086	C-terminal, D2-small domain, of ClpB protein
AYP_RS02615	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AYP_RS02615	SM00245	tail specific protease
AYP_RS02625	SM00014	Acid phosphatase homologues
AYP_RS02635	SM00562	AYP_RS02635
AYP_RS02645	SM00028	Tetratricopeptide repeats
AYP_RS02670	SM00564	beta-propeller repeat
AYP_RS02685	SM00563	Phosphate acyltransferases
AYP_RS02750	SM00825	Beta-ketoacyl synthase
AYP_RS02760	SM00822	AYP_RS02760
AYP_RS02765	SM00825	Beta-ketoacyl synthase
AYP_RS02790	SM00450	Rhodanese Homology Domain
AYP_RS02800	SM00479	AYP_RS02800
AYP_RS02820	SM00382	ATPases associated with a variety of cellular activities
AYP_RS02865	SM00052	Putative diguanylate phosphodiesterase
AYP_RS02865	SM00267	diguanylate cyclase
AYP_RS02885	SM01236	AYP_RS02885
AYP_RS02960	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
AYP_RS02960	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
AYP_RS03015	SM00073	Histidine Phosphotransfer domain
AYP_RS03015	SM00387	Histidine kinase-like ATPases
AYP_RS03015	SM00388	His Kinase A (phosphoacceptor) domain
AYP_RS03015	SM00448	cheY-homologous receiver domain
AYP_RS03035	SM00954	Region found in RelA / SpoT proteins
AYP_RS03050	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AYP_RS03095	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AYP_RS03155	SM00873	B3/4 domain
AYP_RS03155	SM00874	tRNA synthetase B5 domain
AYP_RS03155	SM00896	Ferredoxin-fold anticodon binding domain
AYP_RS03160	SM00411	bacterial (prokaryotic) histone like domain
AYP_RS03175	SM00357	Cold shock protein domain
AYP_RS03175	SM00382	ATPases associated with a variety of cellular activities
AYP_RS03175	SM00959	Rho termination factor, N-terminal domain
AYP_RS03195	SM00977	TilS substrate C-terminal domain
AYP_RS03210	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AYP_RS03210	SM00474	3'-5' exonuclease
AYP_RS03210	SM00475	5'-3' exonuclease
AYP_RS03210	SM00482	DNA polymerase A domain
AYP_RS03230	SM00382	ATPases associated with a variety of cellular activities
AYP_RS03240	SM00347	helix_turn_helix multiple antibiotic resistance protein
AYP_RS03260	SM00331	Sigma factor PP2C-like phosphatases
AYP_RS03550	SM00342	helix_turn_helix, arabinose operon control protein
AYP_RS03580	SM00903	Flavin reductase like domain
AYP_RS03630	SM00564	beta-propeller repeat
AYP_RS03700	SM00387	Histidine kinase-like ATPases
AYP_RS03730	SM00448	cheY-homologous receiver domain
AYP_RS03730	SM00862	Transcriptional regulatory protein, C terminal
AYP_RS03735	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AYP_RS03735	SM00387	Histidine kinase-like ATPases
AYP_RS03735	SM00388	His Kinase A (phosphoacceptor) domain
AYP_RS03745	SM00267	diguanylate cyclase
AYP_RS03770	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
AYP_RS03775	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AYP_RS03775	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
AYP_RS03820	SM00357	Cold shock protein domain
AYP_RS03970	SM00382	ATPases associated with a variety of cellular activities
AYP_RS03970	SM00962	SRP54-type protein, GTPase domain
AYP_RS03970	SM00963	SRP54-type protein, helical bundle domain
AYP_RS03990	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AYP_RS04000	SM00771	ZipA, C-terminal domain (FtsZ-binding)
AYP_RS04005	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AYP_RS04005	SM00292	breast cancer carboxy-terminal domain
AYP_RS04005	SM00532	Ligase N family
AYP_RS04055	SM00363	S4 RNA-binding domain
AYP_RS04090	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
AYP_RS04095	SM00822	AYP_RS04095
AYP_RS04105	SM00257	Lysin motif
AYP_RS04150	SM01400	AYP_RS04150
AYP_RS04185	SM00028	Tetratricopeptide repeats
AYP_RS04195	SM00400	zinc finger
AYP_RS04195	SM00493	AYP_RS04195
AYP_RS04205	SM00363	S4 RNA-binding domain
AYP_RS04255	SM01329	AYP_RS04255
AYP_RS04315	SM00825	Beta-ketoacyl synthase
AYP_RS04335	SM00838	Elongation factor G C-terminus
AYP_RS04335	SM00889	Elongation factor G, domain IV
AYP_RS04375	SM00843	AYP_RS04375
AYP_RS04415	SM00563	Phosphate acyltransferases
AYP_RS04490	SM00382	ATPases associated with a variety of cellular activities
AYP_RS04535	SM01004	Delta-aminolevulinic acid dehydratase
AYP_RS04565	SM00382	ATPases associated with a variety of cellular activities
AYP_RS04610	SM01130	AYP_RS04610
AYP_RS04705	SM01322	AYP_RS04705
AYP_RS04745	SM00346	helix_turn_helix isocitrate lyase regulation
AYP_RS04765	SM00822	AYP_RS04765
AYP_RS04835	SM00342	helix_turn_helix, arabinose operon control protein
AYP_RS04865	SM00822	AYP_RS04865
AYP_RS04880	SM00861	Transketolase, pyrimidine binding domain
AYP_RS04885	SM01018	B12 binding domain
AYP_RS04945	SM00947	Carbonic anhydrase
AYP_RS04955	SM00382	ATPases associated with a variety of cellular activities
AYP_RS05065	SM01091	Transporter associated domain
AYP_RS05110	SM00988	UreE urease accessory protein, N-terminal domain
AYP_RS05160	SM00478	endonuclease III
AYP_RS05170	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AYP_RS05195	SM00382	ATPases associated with a variety of cellular activities
AYP_RS05195	SM00464	Found in ATP-dependent protease La (LON)
AYP_RS05300	SM00530	Helix-turn-helix XRE-family like proteins 
AYP_RS05485	SM00287	Bacterial SH3 domain homologues
AYP_RS05520	SM00530	Helix-turn-helix XRE-family like proteins 
AYP_RS05615	SM01011	Aminopeptidase P, N-terminal domain
AYP_RS05635	SM00422	helix_turn_helix, mercury resistance
AYP_RS05690	SM00479	AYP_RS05690
AYP_RS05695	SM00257	Lysin motif
AYP_RS05715	SM00382	ATPases associated with a variety of cellular activities
AYP_RS05735	SM00479	AYP_RS05735
AYP_RS05745	SM00267	diguanylate cyclase
AYP_RS05820	SM00422	helix_turn_helix, mercury resistance
AYP_RS05845	SM00422	helix_turn_helix, mercury resistance
AYP_RS05855	SM00382	ATPases associated with a variety of cellular activities
AYP_RS05925	SM00857	Resolvase, N terminal domain
AYP_RS05950	SM00857	Resolvase, N terminal domain
AYP_RS06060	SM00857	Resolvase, N terminal domain
AYP_RS06155	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AYP_RS06160	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AYP_RS06170	SM00788	Adenylosuccinate synthetase
AYP_RS06195	SM00100	Cyclic nucleotide-monophosphate binding domain
AYP_RS06195	SM00419	helix_turn_helix, cAMP Regulatory protein
AYP_RS06215	SM00382	ATPases associated with a variety of cellular activities
AYP_RS06215	SM01086	C-terminal, D2-small domain, of ClpB protein
AYP_RS06230	SM00981	AYP_RS06230
AYP_RS06310	SM00382	ATPases associated with a variety of cellular activities
AYP_RS06310	SM00487	DEAD-like helicases superfamily
AYP_RS06310	SM00490	helicase superfamily c-terminal domain
AYP_RS06310	SM00847	Helicase associated domain (HA2)  Add an annotation
AYP_RS06370	SM00422	helix_turn_helix, mercury resistance
AYP_RS06425	SM00530	Helix-turn-helix XRE-family like proteins 
AYP_RS06450	SM00357	Cold shock protein domain
AYP_RS06530	SM00487	DEAD-like helicases superfamily
AYP_RS06540	SM00990	AYP_RS06540
AYP_RS06550	SM00482	DNA polymerase A domain
AYP_RS06580	SM00530	Helix-turn-helix XRE-family like proteins 
AYP_RS06585	SM00530	Helix-turn-helix XRE-family like proteins 
AYP_RS06605	SM00885	D5 N terminal like
AYP_RS06605	SM00943	Bifunctional DNA primase/polymerase, N-terminal
AYP_RS06740	SM00840	AYP_RS06740
AYP_RS06745	SM00116	Domain in cystathionine beta-synthase and other proteins.
AYP_RS06765	SM00382	ATPases associated with a variety of cellular activities
AYP_RS06775	SM00382	ATPases associated with a variety of cellular activities
AYP_RS06820	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
AYP_RS06820	SM00534	ATPase domain of DNA mismatch repair MUTS family
AYP_RS06825	SM00344	helix_turn_helix ASNC type
AYP_RS06835	SM00052	Putative diguanylate phosphodiesterase
AYP_RS06860	SM00422	helix_turn_helix, mercury resistance
AYP_RS06945	SM00796	Allophanate hydrolase subunit 1
AYP_RS06945	SM00797	Allophanate hydrolase subunit 2
AYP_RS06950	SM00878	Biotin carboxylase C-terminal domain
AYP_RS06960	SM00671	Sel1-like repeats.
AYP_RS06990	SM00829	Enoylreductase
AYP_RS07005	SM00796	Allophanate hydrolase subunit 1
AYP_RS07005	SM00797	Allophanate hydrolase subunit 2
AYP_RS07005	SM00878	Biotin carboxylase C-terminal domain
AYP_RS07045	SM00382	ATPases associated with a variety of cellular activities
AYP_RS07125	SM00382	ATPases associated with a variety of cellular activities
AYP_RS07125	SM01086	C-terminal, D2-small domain, of ClpB protein
AYP_RS07160	SM00248	ankyrin repeats
AYP_RS07200	SM00422	helix_turn_helix, mercury resistance
AYP_RS07215	SM01130	AYP_RS07215
AYP_RS07225	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AYP_RS07225	SM00895	AYP_RS07225
AYP_RS07250	SM00342	helix_turn_helix, arabinose operon control protein
AYP_RS07380	SM01060	AYP_RS07380
AYP_RS07395	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AYP_RS07395	SM00895	AYP_RS07395
AYP_RS07410	SM00903	Flavin reductase like domain
AYP_RS07460	SM00346	helix_turn_helix isocitrate lyase regulation
AYP_RS07470	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AYP_RS07470	SM00866	AYP_RS07470
AYP_RS07480	SM00382	ATPases associated with a variety of cellular activities
AYP_RS07530	SM00346	helix_turn_helix isocitrate lyase regulation
AYP_RS07550	SM00346	helix_turn_helix isocitrate lyase regulation
AYP_RS07585	SM00882	Coenzyme A transferase
AYP_RS07590	SM00882	Coenzyme A transferase
AYP_RS07635	SM00878	Biotin carboxylase C-terminal domain
AYP_RS07715	SM01236	AYP_RS07715
AYP_RS07720	SM01060	AYP_RS07720
AYP_RS07735	SM00384	DNA binding domain with preference for A/T rich regions
AYP_RS07755	SM00344	helix_turn_helix ASNC type
AYP_RS07765	SM00387	Histidine kinase-like ATPases
AYP_RS07765	SM00388	His Kinase A (phosphoacceptor) domain
AYP_RS07765	SM00448	cheY-homologous receiver domain
AYP_RS07770	SM00421	helix_turn_helix, Lux Regulon
AYP_RS07770	SM00448	cheY-homologous receiver domain
AYP_RS07795	SM00382	ATPases associated with a variety of cellular activities
AYP_RS07800	SM00062	Bacterial periplasmic substrate-binding proteins
AYP_RS07805	SM00062	Bacterial periplasmic substrate-binding proteins
AYP_RS07845	SM00450	Rhodanese Homology Domain
AYP_RS07850	SM00822	AYP_RS07850
AYP_RS07885	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AYP_RS07935	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
AYP_RS07955	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AYP_RS08005	SM00062	Bacterial periplasmic substrate-binding proteins
AYP_RS08010	SM00382	ATPases associated with a variety of cellular activities
AYP_RS08035	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AYP_RS08035	SM00895	AYP_RS08035
AYP_RS08065	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AYP_RS08115	SM00481	DNA polymerase alpha chain like domain
AYP_RS08120	SM00870	AYP_RS08120
AYP_RS08145	SM00342	helix_turn_helix, arabinose operon control protein
AYP_RS08160	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AYP_RS08195	SM00100	Cyclic nucleotide-monophosphate binding domain
AYP_RS08195	SM00419	helix_turn_helix, cAMP Regulatory protein
AYP_RS08215	SM00382	ATPases associated with a variety of cellular activities
AYP_RS08215	SM00930	AYP_RS08215
AYP_RS08250	SM00062	Bacterial periplasmic substrate-binding proteins
AYP_RS08265	SM00382	ATPases associated with a variety of cellular activities
AYP_RS08275	SM00344	helix_turn_helix ASNC type
AYP_RS08285	SM00563	Phosphate acyltransferases
AYP_RS08295	SM01236	AYP_RS08295
AYP_RS08380	SM00729	Elongator protein 3, MiaB family, Radical SAM
AYP_RS08380	SM00876	Biotin and Thiamin Synthesis associated domain
AYP_RS08400	SM00530	Helix-turn-helix XRE-family like proteins 
AYP_RS08435	SM00861	Transketolase, pyrimidine binding domain
AYP_RS08445	SM00867	YceI-like domain 
AYP_RS08480	SM00344	helix_turn_helix ASNC type
AYP_RS08500	SM00342	helix_turn_helix, arabinose operon control protein
AYP_RS08510	SM00382	ATPases associated with a variety of cellular activities
AYP_RS08530	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AYP_RS08540	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
AYP_RS08600	SM00470	ParB-like nuclease domain
AYP_RS08615	SM00382	ATPases associated with a variety of cellular activities
AYP_RS08675	SM00986	Uracil DNA glycosylase superfamily
AYP_RS08675	SM00987	UreE urease accessory protein, C-terminal domain 
AYP_RS08700	SM00316	Ribosomal protein S1-like RNA-binding domain
AYP_RS08705	SM00411	bacterial (prokaryotic) histone like domain
AYP_RS08715	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
AYP_RS08730	SM00342	helix_turn_helix, arabinose operon control protein
AYP_RS08800	SM00382	ATPases associated with a variety of cellular activities
AYP_RS08860	SM00487	DEAD-like helicases superfamily
AYP_RS08860	SM00490	helicase superfamily c-terminal domain
AYP_RS08860	SM00982	AYP_RS08860
AYP_RS08860	SM01058	CarD-like/TRCF domain
AYP_RS08870	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
AYP_RS08885	SM00271	DnaJ molecular chaperone homology domain
AYP_RS08920	SM00411	bacterial (prokaryotic) histone like domain
AYP_RS08930	SM00342	helix_turn_helix, arabinose operon control protein
AYP_RS09020	SM01006	Siderophore biosynthesis protein domain
AYP_RS09050	SM00855	Phosphoglycerate mutase family
AYP_RS09110	SM00382	ATPases associated with a variety of cellular activities
AYP_RS09150	SM01324	AYP_RS09150
AYP_RS09200	SM00493	AYP_RS09200
AYP_RS09205	SM00341	Helicase and RNase D C-terminal
AYP_RS09205	SM00474	3'-5' exonuclease
AYP_RS09240	SM00382	ATPases associated with a variety of cellular activities
AYP_RS09265	SM00267	diguanylate cyclase
AYP_RS09290	SM00729	Elongator protein 3, MiaB family, Radical SAM
AYP_RS09300	SM00861	Transketolase, pyrimidine binding domain
AYP_RS09320	SM00829	Enoylreductase
AYP_RS09330	SM00382	ATPases associated with a variety of cellular activities
AYP_RS09335	SM00849	Metallo-beta-lactamase superfamily
AYP_RS09360	SM00342	helix_turn_helix, arabinose operon control protein
AYP_RS09380	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AYP_RS09380	SM00866	AYP_RS09380
AYP_RS09405	SM00382	ATPases associated with a variety of cellular activities
AYP_RS09410	SM00567	E-Z type HEAT repeats
AYP_RS09465	SM00882	Coenzyme A transferase
AYP_RS09470	SM00882	Coenzyme A transferase
AYP_RS09500	SM00342	helix_turn_helix, arabinose operon control protein
AYP_RS09525	SM00903	Flavin reductase like domain
AYP_RS09535	SM00342	helix_turn_helix, arabinose operon control protein
AYP_RS09570	SM00382	ATPases associated with a variety of cellular activities
AYP_RS09620	SM00729	Elongator protein 3, MiaB family, Radical SAM
AYP_RS09645	SM00155	Phospholipase D. Active site motifs.
AYP_RS09670	SM00829	Enoylreductase
AYP_RS09765	SM00448	cheY-homologous receiver domain
AYP_RS09765	SM00862	Transcriptional regulatory protein, C terminal
AYP_RS09770	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AYP_RS09770	SM00387	Histidine kinase-like ATPases
AYP_RS09770	SM00388	His Kinase A (phosphoacceptor) domain
AYP_RS09780	SM00342	helix_turn_helix, arabinose operon control protein
AYP_RS09790	SM00822	AYP_RS09790
AYP_RS09795	SM00822	AYP_RS09795
AYP_RS09835	SM00530	Helix-turn-helix XRE-family like proteins 
AYP_RS09895	SM00421	helix_turn_helix, Lux Regulon
AYP_RS09975	SM01400	AYP_RS09975
AYP_RS09985	SM00342	helix_turn_helix, arabinose operon control protein
AYP_RS10000	SM00382	ATPases associated with a variety of cellular activities
AYP_RS10015	SM00829	Enoylreductase
AYP_RS10030	SM00342	helix_turn_helix, arabinose operon control protein
AYP_RS10115	SM00346	helix_turn_helix isocitrate lyase regulation
AYP_RS10145	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AYP_RS10145	SM00866	AYP_RS10145
AYP_RS10175	SM00912	haemagglutination activity domain
AYP_RS10255	SM00422	helix_turn_helix, mercury resistance
AYP_RS10275	SM00347	helix_turn_helix multiple antibiotic resistance protein
AYP_RS10300	SM01060	AYP_RS10300
AYP_RS10320	SM00829	Enoylreductase
AYP_RS10340	SM00091	PAS domain
AYP_RS10340	SM00382	ATPases associated with a variety of cellular activities
AYP_RS10355	SM00855	Phosphoglycerate mutase family
AYP_RS10390	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AYP_RS10390	SM00895	AYP_RS10390
AYP_RS10405	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AYP_RS10420	SM00882	Coenzyme A transferase
AYP_RS10425	SM00882	Coenzyme A transferase
AYP_RS10460	SM00342	helix_turn_helix, arabinose operon control protein
AYP_RS10465	SM00903	Flavin reductase like domain
AYP_RS10510	SM00347	helix_turn_helix multiple antibiotic resistance protein
AYP_RS10530	SM00855	Phosphoglycerate mutase family
AYP_RS10550	SM00346	helix_turn_helix isocitrate lyase regulation
AYP_RS10555	SM00849	Metallo-beta-lactamase superfamily
AYP_RS10575	SM00564	beta-propeller repeat
AYP_RS10585	SM00710	Parallel beta-helix repeats
AYP_RS10620	SM00998	Adenylosuccinate lyase C-terminus
AYP_RS10630	SM00882	Coenzyme A transferase
AYP_RS10635	SM00882	Coenzyme A transferase
AYP_RS10655	SM01192	AYP_RS10655
AYP_RS10655	SM01193	AYP_RS10655
AYP_RS10720	SM00382	ATPases associated with a variety of cellular activities
AYP_RS10720	SM01086	C-terminal, D2-small domain, of ClpB protein
AYP_RS10735	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AYP_RS10775	SM01264	AYP_RS10775
AYP_RS10845	SM00382	ATPases associated with a variety of cellular activities
AYP_RS10845	SM00962	SRP54-type protein, GTPase domain
AYP_RS10845	SM00963	SRP54-type protein, helical bundle domain
AYP_RS10870	SM00116	Domain in cystathionine beta-synthase and other proteins.
AYP_RS10945	SM00347	helix_turn_helix multiple antibiotic resistance protein
AYP_RS10955	SM00052	Putative diguanylate phosphodiesterase
AYP_RS10955	SM00091	PAS domain
AYP_RS10955	SM00267	diguanylate cyclase
AYP_RS11005	SM00344	helix_turn_helix ASNC type
AYP_RS11035	SM00363	S4 RNA-binding domain
AYP_RS11040	SM00382	ATPases associated with a variety of cellular activities
AYP_RS11075	SM00935	Outer membrane protein (OmpH-like)
AYP_RS11085	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AYP_RS11115	SM00729	Elongator protein 3, MiaB family, Radical SAM
AYP_RS11120	SM00091	PAS domain
AYP_RS11120	SM00387	Histidine kinase-like ATPases
AYP_RS11120	SM00388	His Kinase A (phosphoacceptor) domain
AYP_RS11125	SM00382	ATPases associated with a variety of cellular activities
AYP_RS11125	SM00448	cheY-homologous receiver domain
AYP_RS11215	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AYP_RS11225	SM00852	Probable molybdopterin binding domain
AYP_RS11230	SM00852	Probable molybdopterin binding domain
AYP_RS11245	SM00729	Elongator protein 3, MiaB family, Radical SAM
AYP_RS11250	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AYP_RS11260	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AYP_RS11280	SM00448	cheY-homologous receiver domain
AYP_RS11280	SM01012	AYP_RS11280
AYP_RS11310	SM00878	Biotin carboxylase C-terminal domain
AYP_RS11645	SM01236	AYP_RS11645
AYP_RS11680	SM00226	Low molecular weight phosphatase family
AYP_RS11705	SM00382	ATPases associated with a variety of cellular activities
AYP_RS11730	SM00822	AYP_RS11730
AYP_RS11760	SM00344	helix_turn_helix ASNC type
AYP_RS11775	SM00831	Cation transporter/ATPase, N-terminus
AYP_RS11800	SM00382	ATPases associated with a variety of cellular activities
AYP_RS11875	SM00344	helix_turn_helix ASNC type
AYP_RS11880	SM00830	Chorismate mutase type II
AYP_RS11920	SM00342	helix_turn_helix, arabinose operon control protein
AYP_RS11920	SM00871	Bacterial transcription activator, effector binding domain
AYP_RS11930	SM00382	ATPases associated with a variety of cellular activities
AYP_RS11945	SM00862	Transcriptional regulatory protein, C terminal
AYP_RS12015	SM00853	MutL C terminal dimerisation domain
AYP_RS12015	SM01340	AYP_RS12015
AYP_RS12040	SM00363	S4 RNA-binding domain
AYP_RS12125	SM01230	AYP_RS12125
AYP_RS12130	SM00448	cheY-homologous receiver domain
AYP_RS12130	SM00862	Transcriptional regulatory protein, C terminal
AYP_RS12135	SM00387	Histidine kinase-like ATPases
AYP_RS12135	SM00388	His Kinase A (phosphoacceptor) domain
AYP_RS12160	SM00905	Dihydroneopterin aldolase
AYP_RS12175	SM00903	Flavin reductase like domain
AYP_RS12190	SM00822	AYP_RS12190
AYP_RS12195	SM00342	helix_turn_helix, arabinose operon control protein
AYP_RS12200	SM00062	Bacterial periplasmic substrate-binding proteins
AYP_RS12215	SM00937	AYP_RS12215
AYP_RS12335	SM01005	Alanine racemase, C-terminal domain
AYP_RS12345	SM00460	Transglutaminase/protease-like homologues
AYP_RS12365	SM01228	AYP_RS12365
AYP_RS12390	SM00798	AICARFT/IMPCHase bienzyme
AYP_RS12390	SM00851	MGS-like domain
AYP_RS12395	SM01209	AYP_RS12395
AYP_RS12395	SM01210	AYP_RS12395
AYP_RS12405	SM00382	ATPases associated with a variety of cellular activities
AYP_RS12405	SM00930	AYP_RS12405
AYP_RS12415	SM00849	Metallo-beta-lactamase superfamily
AYP_RS12520	SM00972	Spore Coat Protein U domain
AYP_RS12545	SM00972	Spore Coat Protein U domain
AYP_RS12560	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AYP_RS12560	SM00895	AYP_RS12560
AYP_RS12580	SM00342	helix_turn_helix, arabinose operon control protein
AYP_RS12600	SM01034	Sensors of blue-light using FAD
AYP_RS12665	SM00220	Serine/Threonine protein kinases, catalytic domain
AYP_RS12745	SM00855	Phosphoglycerate mutase family
AYP_RS12765	SM00487	DEAD-like helicases superfamily
AYP_RS12765	SM00490	helicase superfamily c-terminal domain
AYP_RS12770	SM00357	Cold shock protein domain
AYP_RS12835	SM00830	Chorismate mutase type II
AYP_RS12895	SM00387	Histidine kinase-like ATPases
AYP_RS12895	SM00388	His Kinase A (phosphoacceptor) domain
AYP_RS12900	SM00448	cheY-homologous receiver domain
AYP_RS12900	SM00862	Transcriptional regulatory protein, C terminal
AYP_RS12910	SM00382	ATPases associated with a variety of cellular activities
AYP_RS12935	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AYP_RS12955	SM00382	ATPases associated with a variety of cellular activities
AYP_RS12970	SM00062	Bacterial periplasmic substrate-binding proteins
AYP_RS13010	SM00479	AYP_RS13010
AYP_RS13025	SM00382	ATPases associated with a variety of cellular activities
AYP_RS13075	SM00342	helix_turn_helix, arabinose operon control protein
AYP_RS13120	SM00729	Elongator protein 3, MiaB family, Radical SAM
AYP_RS13140	SM00996	S-adenosyl-L-homocysteine hydrolase
AYP_RS13140	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
AYP_RS13155	SM00052	Putative diguanylate phosphodiesterase
AYP_RS13155	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AYP_RS13155	SM00091	PAS domain
AYP_RS13155	SM00267	diguanylate cyclase
AYP_RS13160	SM00919	Malic enzyme, NAD binding domain
AYP_RS13160	SM01274	AYP_RS13160
AYP_RS13170	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AYP_RS13225	SM01230	AYP_RS13225
AYP_RS13275	SM00463	Small MutS-related domain
AYP_RS13300	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AYP_RS13305	SM01092	CO dehydrogenase flavoprotein C-terminal domain
AYP_RS13365	SM00382	ATPases associated with a variety of cellular activities
AYP_RS13370	SM00382	ATPases associated with a variety of cellular activities
AYP_RS13415	SM00382	ATPases associated with a variety of cellular activities
AYP_RS13480	SM00829	Enoylreductase
AYP_RS13485	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AYP_RS13625	SM00841	Elongation factor P, C-terminal
AYP_RS13625	SM01185	AYP_RS13625
AYP_RS13640	SM00052	Putative diguanylate phosphodiesterase
AYP_RS13675	SM00257	Lysin motif
AYP_RS13695	SM00936	Penicillin-binding protein 5, C-terminal domain 
AYP_RS13740	SM00382	ATPases associated with a variety of cellular activities
AYP_RS13770	SM00344	helix_turn_helix ASNC type
AYP_RS13825	SM00487	DEAD-like helicases superfamily
AYP_RS13825	SM00490	helicase superfamily c-terminal domain
AYP_RS13855	SM00880	AYP_RS13855
AYP_RS13855	SM01118	AYP_RS13855
AYP_RS13910	SM01329	AYP_RS13910
AYP_RS14065	SM00232	JAB/MPN domain
AYP_RS14240	SM00507	HNH nucleases
AYP_RS14300	SM00479	AYP_RS14300
AYP_RS14340	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
AYP_RS14360	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AYP_RS14375	SM00487	DEAD-like helicases superfamily
AYP_RS14375	SM00490	helicase superfamily c-terminal domain
AYP_RS14385	SM00267	diguanylate cyclase
AYP_RS14455	SM00358	Double-stranded RNA binding motif
AYP_RS14455	SM00535	Ribonuclease III family
AYP_RS14470	SM00838	Elongation factor G C-terminus
AYP_RS14480	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AYP_RS14530	SM00382	ATPases associated with a variety of cellular activities
AYP_RS14600	SM01211	AYP_RS14600
AYP_RS14605	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AYP_RS14610	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AYP_RS14615	SM00382	ATPases associated with a variety of cellular activities
AYP_RS14730	SM00849	Metallo-beta-lactamase superfamily
AYP_RS14735	SM00382	ATPases associated with a variety of cellular activities
AYP_RS14805	SM00434	DNA Topoisomerase IV
AYP_RS14810	SM00893	Electron transfer flavoprotein domain
AYP_RS14815	SM00893	Electron transfer flavoprotein domain
AYP_RS14850	SM00382	ATPases associated with a variety of cellular activities
AYP_RS14855	SM00978	AYP_RS14855
AYP_RS14990	SM00849	Metallo-beta-lactamase superfamily
AYP_RS15005	SM00883	Chaperonin 10 Kd subunit
AYP_RS15020	SM00046	Diacylglycerol kinase catalytic domain (presumed)
AYP_RS15095	SM00382	ATPases associated with a variety of cellular activities
AYP_RS15105	SM01103	AYP_RS15105
AYP_RS15120	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
AYP_RS15125	SM00851	MGS-like domain
AYP_RS15125	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AYP_RS15155	SM00854	Bacterial capsule synthesis protein PGA_cap
AYP_RS15210	SM00881	CoA binding domain
AYP_RS15230	SM00861	Transketolase, pyrimidine binding domain
AYP_RS15275	SM00450	Rhodanese Homology Domain
AYP_RS15390	SM00014	Acid phosphatase homologues
AYP_RS15425	SM00822	AYP_RS15425
AYP_RS15475	SM00387	Histidine kinase-like ATPases
AYP_RS15475	SM00388	His Kinase A (phosphoacceptor) domain
AYP_RS15480	SM00448	cheY-homologous receiver domain
AYP_RS15480	SM00862	Transcriptional regulatory protein, C terminal
AYP_RS15500	SM00563	Phosphate acyltransferases
AYP_RS15515	SM00244	prohibitin homologues
AYP_RS15550	SM00829	Enoylreductase
AYP_RS15555	SM00342	helix_turn_helix, arabinose operon control protein
AYP_RS15575	SM00342	helix_turn_helix, arabinose operon control protein
AYP_RS15620	SM00316	Ribosomal protein S1-like RNA-binding domain
AYP_RS15655	SM00845	GatB domain
AYP_RS15805	SM00073	Histidine Phosphotransfer domain
AYP_RS15805	SM00260	Two component signalling adaptor domain
AYP_RS15805	SM00387	Histidine kinase-like ATPases
AYP_RS15805	SM00448	cheY-homologous receiver domain
AYP_RS15805	SM01231	AYP_RS15805
AYP_RS15810	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AYP_RS15815	SM00260	Two component signalling adaptor domain
AYP_RS15820	SM00448	cheY-homologous receiver domain
AYP_RS15825	SM00448	cheY-homologous receiver domain
AYP_RS15890	SM00671	Sel1-like repeats.
AYP_RS15915	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
AYP_RS15915	SM01232	AYP_RS15915
AYP_RS15935	SM00838	Elongation factor G C-terminus
AYP_RS16005	SM00564	beta-propeller repeat
AYP_RS16020	SM00342	helix_turn_helix, arabinose operon control protein
AYP_RS16070	SM00957	SecA DEAD-like domain
AYP_RS16070	SM00958	SecA preprotein cross-linking domain
AYP_RS16080	SM00849	Metallo-beta-lactamase superfamily
AYP_RS16110	SM00342	helix_turn_helix, arabinose operon control protein
AYP_RS16170	SM00448	cheY-homologous receiver domain
AYP_RS16170	SM00862	Transcriptional regulatory protein, C terminal
AYP_RS16175	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AYP_RS16175	SM00387	Histidine kinase-like ATPases
AYP_RS16175	SM00388	His Kinase A (phosphoacceptor) domain
AYP_RS16300	SM00387	Histidine kinase-like ATPases
AYP_RS16300	SM00388	His Kinase A (phosphoacceptor) domain
AYP_RS16350	SM01323	AYP_RS16350
AYP_RS16380	SM00481	DNA polymerase alpha chain like domain
AYP_RS16405	SM00450	Rhodanese Homology Domain
AYP_RS16480	SM00267	diguanylate cyclase
AYP_RS16495	SM00155	Phospholipase D. Active site motifs.
AYP_RS16500	SM00563	Phosphate acyltransferases
AYP_RS16555	SM01040	BRO family, N-terminal domain
AYP_RS16665	SM00287	Bacterial SH3 domain homologues
AYP_RS16820	SM00530	Helix-turn-helix XRE-family like proteins 
AYP_RS16905	SM00650	Ribosomal RNA adenine dimethylases
AYP_RS16940	SM00878	Biotin carboxylase C-terminal domain
AYP_RS17030	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
AYP_RS17065	SM00729	Elongator protein 3, MiaB family, Radical SAM
AYP_RS17115	SM00342	helix_turn_helix, arabinose operon control protein
AYP_RS17165	SM00316	Ribosomal protein S1-like RNA-binding domain
AYP_RS17165	SM00955	AYP_RS17165
AYP_RS17225	SM00662	RNA polymerases D
AYP_RS17230	SM00363	S4 RNA-binding domain
AYP_RS17230	SM01390	AYP_RS17230
AYP_RS17295	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AYP_RS17300	SM01374	AYP_RS17300
AYP_RS17320	SM00322	K homology RNA-binding domain
AYP_RS17335	SM01382	AYP_RS17335
AYP_RS17335	SM01383	AYP_RS17335
AYP_RS17355	SM01403	AYP_RS17355
AYP_RS17405	SM00563	Phosphate acyltransferases
AYP_RS17420	SM00487	DEAD-like helicases superfamily
AYP_RS17420	SM00490	helicase superfamily c-terminal domain
AYP_RS17465	SM00382	ATPases associated with a variety of cellular activities
AYP_RS17470	SM00487	DEAD-like helicases superfamily
AYP_RS17470	SM00490	helicase superfamily c-terminal domain
AYP_RS17480	SM00861	Transketolase, pyrimidine binding domain
AYP_RS17520	SM00116	Domain in cystathionine beta-synthase and other proteins.
AYP_RS17620	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AYP_RS17805	SM00072	Guanylate kinase homologues.
AYP_RS17810	SM01409	AYP_RS17810
AYP_RS17815	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AYP_RS17815	SM00954	Region found in RelA / SpoT proteins
AYP_RS17895	SM00965	Secretin and TonB N terminus short domain
AYP_RS17915	SM00842	Cell division protein FtsA
AYP_RS18070	SM00671	Sel1-like repeats.
AYP_RS18075	SM00382	ATPases associated with a variety of cellular activities
AYP_RS18090	SM00947	Carbonic anhydrase
AYP_RS18095	SM00316	Ribosomal protein S1-like RNA-binding domain
AYP_RS18095	SM00732	Likely ribonuclease with RNase H fold.
AYP_RS18100	SM00448	cheY-homologous receiver domain
AYP_RS18100	SM00862	Transcriptional regulatory protein, C terminal
AYP_RS18105	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AYP_RS18105	SM00387	Histidine kinase-like ATPases
AYP_RS18105	SM00388	His Kinase A (phosphoacceptor) domain
AYP_RS18155	SM00474	3'-5' exonuclease
AYP_RS18165	SM00530	Helix-turn-helix XRE-family like proteins 
AYP_RS18185	SM00357	Cold shock protein domain
AYP_RS18205	SM00342	helix_turn_helix, arabinose operon control protein
AYP_RS18225	SM00477	DNA/RNA non-specific endonuclease
AYP_RS18225	SM00892	DNA/RNA non-specific endonuclease
AYP_RS18280	SM00671	Sel1-like repeats.
AYP_RS18295	SM00342	helix_turn_helix, arabinose operon control protein
AYP_RS18375	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AYP_RS18385	SM00530	Helix-turn-helix XRE-family like proteins 
AYP_RS18430	SM00829	Enoylreductase
AYP_RS18450	SM00267	diguanylate cyclase
AYP_RS18480	SM00387	Histidine kinase-like ATPases
AYP_RS18480	SM00388	His Kinase A (phosphoacceptor) domain
AYP_RS18480	SM00448	cheY-homologous receiver domain
AYP_RS18490	SM00421	helix_turn_helix, Lux Regulon
AYP_RS18490	SM00448	cheY-homologous receiver domain
AYP_RS18510	SM00344	helix_turn_helix ASNC type
AYP_RS18550	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AYP_RS18580	SM00116	Domain in cystathionine beta-synthase and other proteins.
AYP_RS18580	SM01240	AYP_RS18580
AYP_RS18590	SM00849	Metallo-beta-lactamase superfamily
AYP_RS18635	SM00864	Tubulin/FtsZ family, GTPase domain
AYP_RS18635	SM00865	Tubulin/FtsZ family, C-terminal domain
AYP_RS18640	SM00842	Cell division protein FtsA
AYP_RS18705	SM00267	diguanylate cyclase
AYP_RS18775	SM00387	Histidine kinase-like ATPases
AYP_RS18775	SM00433	TopoisomeraseII
AYP_RS18795	SM00257	Lysin motif
AYP_RS18850	SM00448	cheY-homologous receiver domain
AYP_RS18850	SM00862	Transcriptional regulatory protein, C terminal
AYP_RS18855	SM00387	Histidine kinase-like ATPases
AYP_RS18855	SM00388	His Kinase A (phosphoacceptor) domain
AYP_RS18885	SM00450	Rhodanese Homology Domain
AYP_RS19005	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AYP_RS19005	SM00866	AYP_RS19005
AYP_RS19015	SM00833	Cobalamin synthesis protein cobW C-terminal domain
AYP_RS19045	SM00346	helix_turn_helix isocitrate lyase regulation
AYP_RS19075	SM01130	AYP_RS19075
AYP_RS19100	SM00382	ATPases associated with a variety of cellular activities
AYP_RS19130	SM00478	endonuclease III
AYP_RS19130	SM00525	AYP_RS19130
AYP_RS19150	SM00829	Enoylreductase
AYP_RS19155	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AYP_RS19200	SM00271	DnaJ molecular chaperone homology domain
AYP_RS19330	SM00849	Metallo-beta-lactamase superfamily
AYP_RS19350	SM00235	Zinc-dependent metalloprotease
AYP_RS19355	SM00235	Zinc-dependent metalloprotease
AYP_RS19375	SM01001	AIR carboxylase
AYP_RS19400	SM00014	Acid phosphatase homologues
AYP_RS19465	SM01234	AYP_RS19465
AYP_RS19565	SM00382	ATPases associated with a variety of cellular activities
AYP_RS19570	SM00470	ParB-like nuclease domain
AYP_RS19580	SM00470	ParB-like nuclease domain
AYP_RS19585	SM00487	DEAD-like helicases superfamily
AYP_RS19585	SM00490	helicase superfamily c-terminal domain
AYP_RS19600	SM00257	Lysin motif
AYP_RS19670	SM00829	Enoylreductase
AYP_RS19690	SM00829	Enoylreductase
AYP_RS19780	SM00479	AYP_RS19780
AYP_RS19870	SM00305	Hint (Hedgehog/Intein) domain C-terminal region
AYP_RS19875	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AYP_RS19875	SM00475	5'-3' exonuclease
AYP_RS19900	SM00481	DNA polymerase alpha chain like domain
AYP_RS19930	SM00530	Helix-turn-helix XRE-family like proteins 
AYP_RS19960	SM00072	Guanylate kinase homologues.
AYP_RS20055	SM00232	JAB/MPN domain
