locus-tag class description CTI08_RS00005 PF00308 Bacterial dnaA protein CTI08_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix CTI08_RS00005 PF11638 DnaA N-terminal domain CTI08_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain CTI08_RS00010 PF02767 DNA polymerase III beta subunit, central domain CTI08_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain CTI08_RS00015 PF02463 RecF/RecN/SMC N terminal domain CTI08_RS00020 PF01751 Toprim domain CTI08_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTI08_RS00020 PF18053 DNA gyrase B subunit insert domain CTI08_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus CTI08_RS00020 PF00204 DNA gyrase B CTI08_RS00030 PF09335 SNARE associated Golgi protein CTI08_RS00035 PF12848 ABC transporter CTI08_RS00035 PF00005 ABC transporter CTI08_RS00055 PF01521 Iron-sulphur cluster biosynthesis CTI08_RS00060 PF00561 alpha/beta hydrolase fold CTI08_RS00065 PF03702 Anhydro-N-acetylmuramic acid kinase CTI08_RS00070 PF00579 tRNA synthetases class I (W and Y) CTI08_RS00115 PF00209 Sodium:neurotransmitter symporter family CTI08_RS00125 PF01189 16S rRNA methyltransferase RsmB/F CTI08_RS00125 PF01029 NusB family CTI08_RS00130 PF00551 Formyl transferase CTI08_RS00130 PF02911 Formyl transferase, C-terminal domain CTI08_RS00135 PF00920 Dehydratase family CTI08_RS00150 PF03466 LysR substrate binding domain CTI08_RS00150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTI08_RS00155 PF00860 Permease family CTI08_RS00160 PF00311 Phosphoenolpyruvate carboxylase CTI08_RS00165 PF08361 MAATS-type transcriptional repressor, C-terminal region CTI08_RS00165 PF00440 Bacterial regulatory proteins, tetR family CTI08_RS00170 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CTI08_RS00175 PF00873 AcrB/AcrD/AcrF family CTI08_RS00185 PF00684 DnaJ central domain CTI08_RS00185 PF01556 DnaJ C terminal domain CTI08_RS00185 PF00226 DnaJ domain CTI08_RS00195 PF05173 Dihydrodipicolinate reductase, C-terminus CTI08_RS00195 PF01113 Dihydrodipicolinate reductase, N-terminus CTI08_RS00205 PF07690 Major Facilitator Superfamily CTI08_RS00210 PF00248 Aldo/keto reductase family CTI08_RS00215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTI08_RS00215 PF03466 LysR substrate binding domain CTI08_RS00230 PF00155 Aminotransferase class I and II CTI08_RS00230 PF00392 Bacterial regulatory proteins, gntR family CTI08_RS00235 PF08240 Alcohol dehydrogenase GroES-like domain CTI08_RS00235 PF00107 Zinc-binding dehydrogenase CTI08_RS00240 PF03352 Methyladenine glycosylase CTI08_RS00255 PF10576 Iron-sulfur binding domain of endonuclease III CTI08_RS00255 PF00633 Helix-hairpin-helix motif CTI08_RS00255 PF00730 HhH-GPD superfamily base excision DNA repair protein CTI08_RS00255 PF14815 NUDIX domain CTI08_RS00270 PF07043 Protein of unknown function (DUF1328) CTI08_RS00275 PF03692 Putative zinc- or iron-chelating domain CTI08_RS00280 PF07995 Glucose / Sorbosone dehydrogenase CTI08_RS00285 PF16193 AAA C-terminal domain CTI08_RS00285 PF00004 ATPase family associated with various cellular activities (AAA) CTI08_RS00285 PF12002 MgsA AAA+ ATPase C terminal CTI08_RS00290 PF01226 Formate/nitrite transporter CTI08_RS00305 PF01259 SAICAR synthetase CTI08_RS00315 PF00701 Dihydrodipicolinate synthetase family CTI08_RS00320 PF00857 Isochorismatase family CTI08_RS00325 PF01758 Sodium Bile acid symporter family CTI08_RS00330 PF01554 MatE CTI08_RS00335 PF04463 Protein of unknown function (DUF523) CTI08_RS00340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CTI08_RS00350 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CTI08_RS00355 PF02798 Glutathione S-transferase, N-terminal domain CTI08_RS00355 PF14497 Glutathione S-transferase, C-terminal domain CTI08_RS00365 PF00324 Amino acid permease CTI08_RS00375 PF02492 CobW/HypB/UreG, nucleotide-binding domain CTI08_RS00375 PF07683 Cobalamin synthesis protein cobW C-terminal domain CTI08_RS00385 PF07702 UTRA domain CTI08_RS00385 PF00392 Bacterial regulatory proteins, gntR family CTI08_RS00390 PF05962 HutD CTI08_RS00395 PF01175 Urocanase Rossmann-like domain CTI08_RS00395 PF17392 Urocanase C-terminal domain CTI08_RS00395 PF17391 Urocanase N-terminal domain CTI08_RS00400 PF00221 Aromatic amino acid lyase CTI08_RS00405 PF00324 Amino acid permease CTI08_RS00410 PF01979 Amidohydrolase family CTI08_RS00415 PF00491 Arginase family CTI08_RS00425 PF13419 Haloacid dehalogenase-like hydrolase CTI08_RS00430 PF01177 Asp/Glu/Hydantoin racemase CTI08_RS00445 PF01026 TatD related DNase CTI08_RS00460 PF07693 KAP family P-loop domain CTI08_RS00470 PF00425 chorismate binding enzyme CTI08_RS00475 PF00857 Isochorismatase family CTI08_RS00475 PF00550 Phosphopantetheine attachment site CTI08_RS00480 PF00106 short chain dehydrogenase CTI08_RS00485 PF00501 AMP-binding enzyme CTI08_RS00485 PF00668 Condensation domain CTI08_RS00485 PF00550 Phosphopantetheine attachment site CTI08_RS00490 PF00668 Condensation domain CTI08_RS00490 PF08242 Methyltransferase domain CTI08_RS00490 PF00501 AMP-binding enzyme CTI08_RS00490 PF00550 Phosphopantetheine attachment site CTI08_RS00495 PF00975 Thioesterase domain CTI08_RS00495 PF00668 Condensation domain CTI08_RS00495 PF13193 AMP-binding enzyme C-terminal domain CTI08_RS00495 PF00550 Phosphopantetheine attachment site CTI08_RS00495 PF00501 AMP-binding enzyme CTI08_RS00500 PF13193 AMP-binding enzyme C-terminal domain CTI08_RS00500 PF00501 AMP-binding enzyme CTI08_RS00505 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) CTI08_RS00510 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CTI08_RS00510 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CTI08_RS00525 PF01648 4'-phosphopantetheinyl transferase superfamily CTI08_RS00525 PF17837 4'-phosphopantetheinyl transferase N-terminal domain CTI08_RS00530 PF00975 Thioesterase domain CTI08_RS00535 PF00593 TonB dependent receptor CTI08_RS00535 PF07715 TonB-dependent Receptor Plug Domain CTI08_RS00550 PF01554 MatE CTI08_RS00555 PF00664 ABC transporter transmembrane region CTI08_RS00555 PF03412 Peptidase C39 family CTI08_RS00555 PF00005 ABC transporter CTI08_RS00580 PF13737 Transposase DDE domain CTI08_RS00615 PF06527 TniQ CTI08_RS00615 PF15978 Tn7-like transposition protein D CTI08_RS00620 PF13401 AAA domain CTI08_RS00620 PF11426 Tn7 transposition regulator TnsC CTI08_RS00625 PF00665 Integrase core domain CTI08_RS00630 PF08721 TnsA endonuclease C terminal CTI08_RS00630 PF08722 TnsA endonuclease N terminal CTI08_RS00635 PF01380 SIS domain CTI08_RS00640 PF14602 Hexapeptide repeat of succinyl-transferase CTI08_RS00640 PF12804 MobA-like NTP transferase domain CTI08_RS00640 PF00132 Bacterial transferase hexapeptide (six repeats) CTI08_RS00645 PF04608 Phosphatidylglycerophosphatase A CTI08_RS00650 PF00586 AIR synthase related protein, N-terminal domain CTI08_RS00650 PF02769 AIR synthase related protein, C-terminal domain CTI08_RS00655 PF01029 NusB family CTI08_RS00660 PF00885 6,7-dimethyl-8-ribityllumazine synthase CTI08_RS00665 PF00925 GTP cyclohydrolase II CTI08_RS00665 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CTI08_RS00695 PF02580 D-Tyr-tRNA(Tyr) deacylase CTI08_RS00700 PF06628 Catalase-related immune-responsive CTI08_RS00700 PF00199 Catalase CTI08_RS00710 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CTI08_RS00710 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CTI08_RS00715 PF00581 Rhodanese-like domain CTI08_RS00720 PF02666 Phosphatidylserine decarboxylase CTI08_RS00725 PF03069 Acetamidase/Formamidase family CTI08_RS00740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTI08_RS00740 PF00989 PAS fold CTI08_RS00740 PF11808 Phosphate regulon sensor protein PhoR CTI08_RS00740 PF00512 His Kinase A (phospho-acceptor) domain CTI08_RS00745 PF00072 Response regulator receiver domain CTI08_RS00745 PF00486 Transcriptional regulatory protein, C terminal CTI08_RS00755 PF00106 short chain dehydrogenase CTI08_RS00760 PF01554 MatE CTI08_RS00765 PF00155 Aminotransferase class I and II CTI08_RS00770 PF04286 Protein of unknown function (DUF445) CTI08_RS00785 PF04262 Glutamate-cysteine ligase CTI08_RS00790 PF02600 Disulfide bond formation protein DsbB CTI08_RS00795 PF04717 Type VI secretion system, phage-baseplate injector CTI08_RS00795 PF13296 Putative type VI secretion system Rhs element Vgr CTI08_RS00795 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) CTI08_RS00800 PF00182 Chitinase class I CTI08_RS00825 PF05728 Uncharacterised protein family (UPF0227) CTI08_RS00830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTI08_RS00830 PF00204 DNA gyrase B CTI08_RS00830 PF00986 DNA gyrase B subunit, carboxyl terminus CTI08_RS00830 PF01751 Toprim domain CTI08_RS00835 PF04115 Ureidoglycolate lyase CTI08_RS00840 PF03561 Allantoicase repeat CTI08_RS00845 PF01494 FAD binding domain CTI08_RS00855 PF00860 Permease family CTI08_RS00860 PF00576 HIUase/Transthyretin family CTI08_RS00890 PF02683 Cytochrome C biogenesis protein transmembrane region CTI08_RS00890 PF11412 Disulphide bond corrector protein DsbC CTI08_RS00900 PF07859 alpha/beta hydrolase fold CTI08_RS00910 PF03960 ArsC family CTI08_RS00915 PF03372 Endonuclease/Exonuclease/phosphatase family CTI08_RS00920 PF00156 Phosphoribosyl transferase domain CTI08_RS00925 PF07715 TonB-dependent Receptor Plug Domain CTI08_RS00925 PF00593 TonB dependent receptor CTI08_RS00935 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CTI08_RS00935 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CTI08_RS00940 PF03033 Glycosyltransferase family 28 N-terminal domain CTI08_RS00940 PF04101 Glycosyltransferase family 28 C-terminal domain CTI08_RS00945 PF08245 Mur ligase middle domain CTI08_RS00945 PF02875 Mur ligase family, glutamate ligase domain CTI08_RS00945 PF01225 Mur ligase family, catalytic domain CTI08_RS00950 PF07478 D-ala D-ala ligase C-terminus CTI08_RS00950 PF01820 D-ala D-ala ligase N-terminus CTI08_RS00955 PF08478 POTRA domain, FtsQ-type CTI08_RS00955 PF03799 Cell division protein FtsQ CTI08_RS00960 PF02491 SHS2 domain inserted in FTSA CTI08_RS00965 PF12327 FtsZ family, C-terminal domain CTI08_RS00965 PF00091 Tubulin/FtsZ family, GTPase domain CTI08_RS00970 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CTI08_RS00980 PF01551 Peptidase family M23 CTI08_RS00985 PF00456 Transketolase, thiamine diphosphate binding domain CTI08_RS00985 PF17831 Pyruvate dehydrogenase E1 component middle domain CTI08_RS00990 PF00364 Biotin-requiring enzyme CTI08_RS00990 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CTI08_RS00990 PF02817 e3 binding domain CTI08_RS01000 PF01169 Uncharacterized protein family UPF0016 CTI08_RS01005 PF07715 TonB-dependent Receptor Plug Domain CTI08_RS01005 PF00593 TonB dependent receptor CTI08_RS01010 PF01613 Flavin reductase like domain CTI08_RS01010 PF00258 Flavodoxin CTI08_RS01015 PF03692 Putative zinc- or iron-chelating domain CTI08_RS01020 PF00571 CBS domain CTI08_RS01020 PF00478 IMP dehydrogenase / GMP reductase domain CTI08_RS01025 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CTI08_RS01025 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CTI08_RS01025 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CTI08_RS01025 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CTI08_RS01030 PF01243 Pyridoxamine 5'-phosphate oxidase CTI08_RS01030 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CTI08_RS01035 PF17768 RecJ OB domain CTI08_RS01035 PF01368 DHH family CTI08_RS01035 PF02272 DHHA1 domain CTI08_RS01055 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CTI08_RS01060 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CTI08_RS01065 PF04452 RNA methyltransferase CTI08_RS01070 PF00924 Mechanosensitive ion channel CTI08_RS01080 PF00501 AMP-binding enzyme CTI08_RS01080 PF16177 Acetyl-coenzyme A synthetase N-terminus CTI08_RS01080 PF13193 AMP-binding enzyme C-terminal domain CTI08_RS01085 PF00857 Isochorismatase family CTI08_RS01090 PF01037 Lrp/AsnC ligand binding domain CTI08_RS01095 PF00296 Luciferase-like monooxygenase CTI08_RS01100 PF03358 NADPH-dependent FMN reductase CTI08_RS01105 PF00196 Bacterial regulatory proteins, luxR family CTI08_RS01105 PF00072 Response regulator receiver domain CTI08_RS01115 PF00672 HAMP domain CTI08_RS01115 PF01627 Hpt domain CTI08_RS01115 PF00072 Response regulator receiver domain CTI08_RS01115 PF00512 His Kinase A (phospho-acceptor) domain CTI08_RS01115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTI08_RS01120 PF04341 Protein of unknown function, DUF485 CTI08_RS01125 PF00474 Sodium:solute symporter family CTI08_RS01135 PF02028 BCCT, betaine/carnitine/choline family transporter CTI08_RS01160 PF00005 ABC transporter CTI08_RS01160 PF17760 UvrA interaction domain CTI08_RS01160 PF17755 UvrA DNA-binding domain CTI08_RS01165 PF16925 Tetracyclin repressor-like, C-terminal domain CTI08_RS01165 PF00440 Bacterial regulatory proteins, tetR family CTI08_RS01170 PF00107 Zinc-binding dehydrogenase CTI08_RS01170 PF08240 Alcohol dehydrogenase GroES-like domain CTI08_RS01180 PF06942 GlpM protein CTI08_RS01185 PF02581 Thiamine monophosphate synthase CTI08_RS01185 PF03070 TENA/THI-4/PQQC family CTI08_RS01185 PF08543 Phosphomethylpyrimidine kinase CTI08_RS01195 PF07690 Major Facilitator Superfamily CTI08_RS01200 PF00436 Single-strand binding protein family CTI08_RS01210 PF03591 AzlC protein CTI08_RS01220 PF00324 Amino acid permease CTI08_RS01225 PF00392 Bacterial regulatory proteins, gntR family CTI08_RS01225 PF00155 Aminotransferase class I and II CTI08_RS01230 PF00202 Aminotransferase class-III CTI08_RS01235 PF00171 Aldehyde dehydrogenase family CTI08_RS01240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTI08_RS01245 PF00857 Isochorismatase family CTI08_RS01250 PF02678 Pirin CTI08_RS01250 PF05726 Pirin C-terminal cupin domain CTI08_RS01255 PF01593 Flavin containing amine oxidoreductase CTI08_RS01275 PF07690 Major Facilitator Superfamily CTI08_RS01280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTI08_RS01280 PF03466 LysR substrate binding domain CTI08_RS01305 PF00248 Aldo/keto reductase family CTI08_RS01310 PF02311 AraC-like ligand binding domain CTI08_RS01310 PF12833 Helix-turn-helix domain CTI08_RS01330 PF01638 HxlR-like helix-turn-helix CTI08_RS01345 PF01638 HxlR-like helix-turn-helix CTI08_RS01355 PF02525 Flavodoxin-like fold CTI08_RS01375 PF12833 Helix-turn-helix domain CTI08_RS01385 PF02705 K+ potassium transporter CTI08_RS01410 PF00230 Major intrinsic protein CTI08_RS01425 PF00977 Histidine biosynthesis protein CTI08_RS01430 PF01636 Phosphotransferase enzyme family CTI08_RS01455 PF00977 Histidine biosynthesis protein CTI08_RS01470 PF00117 Glutamine amidotransferase class-I CTI08_RS01475 PF00475 Imidazoleglycerol-phosphate dehydratase CTI08_RS01495 PF00583 Acetyltransferase (GNAT) family CTI08_RS01500 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CTI08_RS01500 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CTI08_RS01510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTI08_RS01510 PF00512 His Kinase A (phospho-acceptor) domain CTI08_RS01510 PF00672 HAMP domain CTI08_RS01515 PF00486 Transcriptional regulatory protein, C terminal CTI08_RS01515 PF00072 Response regulator receiver domain CTI08_RS01520 PF09371 Tex-like protein N-terminal domain CTI08_RS01520 PF16921 Tex protein YqgF-like domain CTI08_RS01520 PF17674 HHH domain CTI08_RS01520 PF00575 S1 RNA binding domain CTI08_RS01540 PF00106 short chain dehydrogenase CTI08_RS01545 PF01053 Cys/Met metabolism PLP-dependent enzyme CTI08_RS01550 PF12848 ABC transporter CTI08_RS01550 PF00005 ABC transporter CTI08_RS01575 PF00529 HlyD membrane-fusion protein of T1SS CTI08_RS01575 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CTI08_RS01580 PF00873 AcrB/AcrD/AcrF family CTI08_RS01585 PF01545 Cation efflux family CTI08_RS01615 PF00324 Amino acid permease CTI08_RS01630 PF00749 tRNA synthetases class I (E and Q), catalytic domain CTI08_RS01645 PF01795 MraW methylase family CTI08_RS01655 PF03717 Penicillin-binding Protein dimerisation domain CTI08_RS01655 PF00905 Penicillin binding protein transpeptidase domain CTI08_RS01660 PF01225 Mur ligase family, catalytic domain CTI08_RS01660 PF02875 Mur ligase family, glutamate ligase domain CTI08_RS01660 PF08245 Mur ligase middle domain CTI08_RS01665 PF01225 Mur ligase family, catalytic domain CTI08_RS01665 PF02875 Mur ligase family, glutamate ligase domain CTI08_RS01665 PF08245 Mur ligase middle domain CTI08_RS01670 PF00953 Glycosyl transferase family 4 CTI08_RS01680 PF13847 Methyltransferase domain CTI08_RS01685 PF00905 Penicillin binding protein transpeptidase domain CTI08_RS01685 PF17092 Penicillin-binding protein OB-like domain CTI08_RS01685 PF00912 Transglycosylase CTI08_RS01690 PF11104 Type IV pilus assembly protein PilM; CTI08_RS01695 PF05137 Fimbrial assembly protein (PilN) CTI08_RS01700 PF04350 Pilus assembly protein, PilO CTI08_RS01710 PF07660 Secretin and TonB N terminus short domain CTI08_RS01710 PF03958 Bacterial type II/III secretion system short domain CTI08_RS01710 PF11741 AMIN domain CTI08_RS01710 PF00263 Bacterial type II and III secretion system protein CTI08_RS01715 PF01202 Shikimate kinase CTI08_RS01720 PF01761 3-dehydroquinate synthase CTI08_RS01730 PF01493 GXGXG motif CTI08_RS01730 PF00310 Glutamine amidotransferases class-II CTI08_RS01730 PF04898 Glutamate synthase central domain CTI08_RS01730 PF01645 Conserved region in glutamate synthase CTI08_RS01735 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CTI08_RS01735 PF07992 Pyridine nucleotide-disulphide oxidoreductase CTI08_RS01745 PF04011 LemA family CTI08_RS01750 PF04536 TPM domain CTI08_RS01760 PF07963 Prokaryotic N-terminal methylation motif CTI08_RS01760 PF00114 Pilin (bacterial filament) CTI08_RS01770 PF15864 Protein glycosylation ligase CTI08_RS01770 PF11846 Virulence factor membrane-bound polymerase, C-terminal CTI08_RS01770 PF04932 O-Antigen ligase CTI08_RS01775 PF00210 Ferritin-like domain CTI08_RS01780 PF04324 BFD-like [2Fe-2S] binding domain CTI08_RS01785 PF01042 Endoribonuclease L-PSP CTI08_RS01790 PF13291 ACT domain CTI08_RS01790 PF02824 TGS domain CTI08_RS01790 PF04607 Region found in RelA / SpoT proteins CTI08_RS01795 PF01192 RNA polymerase Rpb6 CTI08_RS01800 PF00625 Guanylate kinase CTI08_RS01805 PF02401 LytB protein CTI08_RS01845 PF00886 Ribosomal protein S16 CTI08_RS01850 PF01782 RimM N-terminal domain CTI08_RS01850 PF05239 PRC-barrel domain CTI08_RS01855 PF01746 tRNA (Guanine-1)-methyltransferase CTI08_RS01860 PF01245 Ribosomal protein L19 CTI08_RS01865 PF00561 alpha/beta hydrolase fold CTI08_RS01870 PF03280 Proteobacterial lipase chaperone protein CTI08_RS01875 PF16198 tRNA pseudouridylate synthase B C-terminal domain CTI08_RS01875 PF01509 TruB family pseudouridylate synthase (N terminal domain) CTI08_RS01875 PF09157 Pseudouridine synthase II TruB, C-terminal CTI08_RS01880 PF01925 Sulfite exporter TauE/SafE CTI08_RS01890 PF00892 EamA-like transporter family CTI08_RS01895 PF00892 EamA-like transporter family CTI08_RS01900 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CTI08_RS01900 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CTI08_RS01905 PF02913 FAD linked oxidases, C-terminal domain CTI08_RS01905 PF01565 FAD binding domain CTI08_RS01915 PF03992 Antibiotic biosynthesis monooxygenase CTI08_RS01920 PF02525 Flavodoxin-like fold CTI08_RS01930 PF07690 Major Facilitator Superfamily CTI08_RS01935 PF12805 FUSC-like inner membrane protein yccS CTI08_RS01940 PF00080 Copper/zinc superoxide dismutase (SODC) CTI08_RS01945 PF01594 AI-2E family transporter CTI08_RS01950 PF13614 AAA domain CTI08_RS01980 PF00324 Amino acid permease CTI08_RS01985 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CTI08_RS01985 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CTI08_RS01990 PF00202 Aminotransferase class-III CTI08_RS01995 PF04958 Arginine N-succinyltransferase beta subunit CTI08_RS02000 PF00171 Aldehyde dehydrogenase family CTI08_RS02005 PF04996 Succinylarginine dihydrolase CTI08_RS02010 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CTI08_RS02025 PF00082 Subtilase family CTI08_RS02025 PF05922 Peptidase inhibitor I9 CTI08_RS02040 PF03466 LysR substrate binding domain CTI08_RS02040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTI08_RS02045 PF00892 EamA-like transporter family CTI08_RS02055 PF02092 Glycyl-tRNA synthetase beta subunit CTI08_RS02055 PF05746 DALR anticodon binding domain CTI08_RS02060 PF02091 Glycyl-tRNA synthetase alpha subunit CTI08_RS02085 PF00571 CBS domain CTI08_RS02090 PF04024 PspC domain CTI08_RS02100 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CTI08_RS02100 PF02770 Acyl-CoA dehydrogenase, middle domain CTI08_RS02100 PF12806 Acetyl-CoA dehydrogenase C-terminal like CTI08_RS02100 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CTI08_RS02110 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CTI08_RS02110 PF08501 Shikimate dehydrogenase substrate binding domain CTI08_RS02110 PF01488 Shikimate / quinate 5-dehydrogenase CTI08_RS02115 PF01218 Coproporphyrinogen III oxidase CTI08_RS02120 PF00925 GTP cyclohydrolase II CTI08_RS02125 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CTI08_RS02125 PF02780 Transketolase, C-terminal domain CTI08_RS02125 PF02779 Transketolase, pyrimidine binding domain CTI08_RS02130 PF00459 Inositol monophosphatase family CTI08_RS02135 PF03880 DbpA RNA binding domain CTI08_RS02135 PF00270 DEAD/DEAH box helicase CTI08_RS02135 PF00271 Helicase conserved C-terminal domain CTI08_RS02135 PF12343 Cold shock protein DEAD box A CTI08_RS02140 PF00005 ABC transporter CTI08_RS02145 PF02405 Permease MlaE CTI08_RS02155 PF05494 MlaC protein CTI08_RS02165 PF01544 CorA-like Mg2+ transporter protein CTI08_RS02170 PF03641 Possible lysine decarboxylase CTI08_RS02175 PF00293 NUDIX domain CTI08_RS02180 PF00156 Phosphoribosyl transferase domain CTI08_RS02185 PF17191 RecG wedge domain CTI08_RS02185 PF00271 Helicase conserved C-terminal domain CTI08_RS02185 PF00270 DEAD/DEAH box helicase CTI08_RS02200 PF01553 Acyltransferase CTI08_RS02210 PF00375 Sodium:dicarboxylate symporter family CTI08_RS02220 PF01926 50S ribosome-binding GTPase CTI08_RS02225 PF02082 Transcriptional regulator CTI08_RS02230 PF00970 Oxidoreductase FAD-binding domain CTI08_RS02230 PF00175 Oxidoreductase NAD-binding domain CTI08_RS02230 PF00042 Globin CTI08_RS02235 PF05872 Bacterial protein of unknown function (DUF853) CTI08_RS02240 PF01053 Cys/Met metabolism PLP-dependent enzyme CTI08_RS02245 PF00117 Glutamine amidotransferase class-I CTI08_RS02250 PF00338 Ribosomal protein S10p/S20e CTI08_RS02255 PF00297 Ribosomal protein L3 CTI08_RS02260 PF00573 Ribosomal protein L4/L1 family CTI08_RS02265 PF00276 Ribosomal protein L23 CTI08_RS02270 PF00181 Ribosomal Proteins L2, RNA binding domain CTI08_RS02270 PF03947 Ribosomal Proteins L2, C-terminal domain CTI08_RS02275 PF00203 Ribosomal protein S19 CTI08_RS02280 PF00237 Ribosomal protein L22p/L17e CTI08_RS02285 PF07650 KH domain CTI08_RS02285 PF00189 Ribosomal protein S3, C-terminal domain CTI08_RS02290 PF00252 Ribosomal protein L16p/L10e CTI08_RS02295 PF00831 Ribosomal L29 protein CTI08_RS02300 PF00366 Ribosomal protein S17 CTI08_RS02305 PF00238 Ribosomal protein L14p/L23e CTI08_RS02310 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CTI08_RS02310 PF00467 KOW motif CTI08_RS02315 PF00673 ribosomal L5P family C-terminus CTI08_RS02315 PF00281 Ribosomal protein L5 CTI08_RS02320 PF00253 Ribosomal protein S14p/S29e CTI08_RS02325 PF00410 Ribosomal protein S8 CTI08_RS02330 PF00347 Ribosomal protein L6 CTI08_RS02335 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CTI08_RS02340 PF03719 Ribosomal protein S5, C-terminal domain CTI08_RS02340 PF00333 Ribosomal protein S5, N-terminal domain CTI08_RS02345 PF00327 Ribosomal protein L30p/L7e CTI08_RS02350 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CTI08_RS02355 PF00344 SecY translocase CTI08_RS02360 PF00444 Ribosomal protein L36 CTI08_RS02365 PF00416 Ribosomal protein S13/S18 CTI08_RS02370 PF00411 Ribosomal protein S11 CTI08_RS02375 PF00163 Ribosomal protein S4/S9 N-terminal domain CTI08_RS02375 PF01479 S4 domain CTI08_RS02380 PF01000 RNA polymerase Rpb3/RpoA insert domain CTI08_RS02380 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CTI08_RS02380 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CTI08_RS02385 PF01196 Ribosomal protein L17 CTI08_RS02390 PF00743 Flavin-binding monooxygenase-like CTI08_RS02395 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CTI08_RS02395 PF02770 Acyl-CoA dehydrogenase, middle domain CTI08_RS02395 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CTI08_RS02400 PF03937 Flavinator of succinate dehydrogenase CTI08_RS02430 PF09526 Probable metal-binding protein (DUF2387) CTI08_RS02435 PF01432 Peptidase family M3 CTI08_RS02440 PF00575 S1 RNA binding domain CTI08_RS02440 PF17876 Cold shock domain CTI08_RS02440 PF08461 Ribonuclease R winged-helix domain CTI08_RS02440 PF08206 Ribonuclease B OB domain CTI08_RS02440 PF00773 RNB domain CTI08_RS02485 PF01557 Fumarylacetoacetate (FAA) hydrolase family CTI08_RS02490 PF12833 Helix-turn-helix domain CTI08_RS02495 PF00892 EamA-like transporter family CTI08_RS02500 PF03631 Virulence factor BrkB CTI08_RS02505 PF03358 NADPH-dependent FMN reductase CTI08_RS02530 PF02130 Uncharacterized protein family UPF0054 CTI08_RS02535 PF02562 PhoH-like protein CTI08_RS02540 PF01938 TRAM domain CTI08_RS02540 PF04055 Radical SAM superfamily CTI08_RS02540 PF00919 Uncharacterized protein family UPF0004 CTI08_RS02545 PF01464 Transglycosylase SLT domain CTI08_RS02545 PF10145 Phage-related minor tail protein CTI08_RS02545 PF01551 Peptidase family M23 CTI08_RS02555 PF00056 lactate/malate dehydrogenase, NAD binding domain CTI08_RS02555 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CTI08_RS02575 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CTI08_RS02580 PF01066 CDP-alcohol phosphatidyltransferase CTI08_RS02625 PF02770 Acyl-CoA dehydrogenase, middle domain CTI08_RS02625 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CTI08_RS02625 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CTI08_RS02630 PF17932 Tetracyclin repressor-like, C-terminal domain CTI08_RS02630 PF00440 Bacterial regulatory proteins, tetR family CTI08_RS02645 PF01039 Carboxyl transferase domain CTI08_RS02650 PF02770 Acyl-CoA dehydrogenase, middle domain CTI08_RS02650 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CTI08_RS02650 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CTI08_RS02660 PF00289 Biotin carboxylase, N-terminal domain CTI08_RS02660 PF02785 Biotin carboxylase C-terminal domain CTI08_RS02660 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CTI08_RS02660 PF00364 Biotin-requiring enzyme CTI08_RS02670 PF04386 Stringent starvation protein B CTI08_RS02675 PF13417 Glutathione S-transferase, N-terminal domain CTI08_RS02675 PF00043 Glutathione S-transferase, C-terminal domain CTI08_RS02680 PF00380 Ribosomal protein S9/S16 CTI08_RS02685 PF00572 Ribosomal protein L13 CTI08_RS02690 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CTI08_RS02695 PF00398 Ribosomal RNA adenine dimethylase CTI08_RS02700 PF00149 Calcineurin-like phosphoesterase CTI08_RS02720 PF16360 GTP-binding GTPase Middle Region CTI08_RS02720 PF13167 GTP-binding GTPase N-terminal CTI08_RS02720 PF01926 50S ribosome-binding GTPase CTI08_RS02730 PF13091 PLD-like domain CTI08_RS02735 PF00149 Calcineurin-like phosphoesterase CTI08_RS02735 PF10518 TAT (twin-arginine translocation) pathway signal sequence CTI08_RS02740 PF01389 OmpA-like transmembrane domain CTI08_RS02740 PF00691 OmpA family CTI08_RS02745 PF17152 Periplasmic sensor domain CTI08_RS02745 PF00990 Diguanylate cyclase, GGDEF domain CTI08_RS02790 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CTI08_RS02790 PF07992 Pyridine nucleotide-disulphide oxidoreductase CTI08_RS02800 PF00753 Metallo-beta-lactamase superfamily CTI08_RS02800 PF04273 Putative phosphatase (DUF442) CTI08_RS02805 PF00561 alpha/beta hydrolase fold CTI08_RS02810 PF00085 Thioredoxin CTI08_RS02815 PF03061 Thioesterase superfamily CTI08_RS02825 PF04461 Protein of unknown function (DUF520) CTI08_RS02835 PF01266 FAD dependent oxidoreductase CTI08_RS02835 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CTI08_RS02845 PF03795 YCII-related domain CTI08_RS02850 PF04279 Intracellular septation protein A CTI08_RS02855 PF02811 PHP domain CTI08_RS02860 PF01062 Bestrophin, RFP-TM, chloride channel CTI08_RS02865 PF04002 RadC-like JAB domain CTI08_RS02870 PF02441 Flavoprotein CTI08_RS02870 PF04127 DNA / pantothenate metabolism flavoprotein CTI08_RS02875 PF07549 SecD/SecF GG Motif CTI08_RS02875 PF02355 Protein export membrane protein CTI08_RS02880 PF07549 SecD/SecF GG Motif CTI08_RS02880 PF02355 Protein export membrane protein CTI08_RS02880 PF13721 SecD export protein N-terminal TM region CTI08_RS02885 PF02699 Preprotein translocase subunit CTI08_RS02890 PF01702 Queuine tRNA-ribosyltransferase CTI08_RS02905 PF02547 Queuosine biosynthesis protein CTI08_RS02935 PF07689 KaiB domain CTI08_RS02935 PF00512 His Kinase A (phospho-acceptor) domain CTI08_RS02935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTI08_RS02940 PF08335 GlnD PII-uridylyltransferase CTI08_RS02940 PF03710 Glutamate-ammonia ligase adenylyltransferase CTI08_RS02945 PF01063 Amino-transferase class IV CTI08_RS02960 PF01522 Polysaccharide deacetylase CTI08_RS02965 PF00535 Glycosyl transferase family 2 CTI08_RS02970 PF13439 Glycosyltransferase Family 4 CTI08_RS02970 PF00534 Glycosyl transferases group 1 CTI08_RS02995 PF17102 Stealth protein CR3, conserved region 3 CTI08_RS02995 PF17101 Stealth protein CR1, conserved region 1 CTI08_RS02995 PF11380 Stealth protein CR2, conserved region 2 CTI08_RS03000 PF01336 OB-fold nucleic acid binding domain CTI08_RS03000 PF00152 tRNA synthetases class II (D, K and N) CTI08_RS03000 PF02938 GAD domain CTI08_RS03010 PF00593 TonB dependent receptor CTI08_RS03010 PF07715 TonB-dependent Receptor Plug Domain CTI08_RS03030 PF06146 Phosphate-starvation-inducible E CTI08_RS03035 PF02798 Glutathione S-transferase, N-terminal domain CTI08_RS03035 PF00043 Glutathione S-transferase, C-terminal domain CTI08_RS03040 PF03466 LysR substrate binding domain CTI08_RS03040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTI08_RS03045 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CTI08_RS03045 PF12806 Acetyl-CoA dehydrogenase C-terminal like CTI08_RS03045 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CTI08_RS03045 PF02770 Acyl-CoA dehydrogenase, middle domain CTI08_RS03050 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CTI08_RS03050 PF02770 Acyl-CoA dehydrogenase, middle domain CTI08_RS03050 PF12806 Acetyl-CoA dehydrogenase C-terminal like CTI08_RS03050 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CTI08_RS03060 PF00672 HAMP domain CTI08_RS03060 PF00512 His Kinase A (phospho-acceptor) domain CTI08_RS03060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTI08_RS03065 PF00486 Transcriptional regulatory protein, C terminal CTI08_RS03065 PF00072 Response regulator receiver domain CTI08_RS03070 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CTI08_RS03090 PF01923 Cobalamin adenosyltransferase CTI08_RS03095 PF07715 TonB-dependent Receptor Plug Domain CTI08_RS03095 PF00593 TonB dependent receptor CTI08_RS03100 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CTI08_RS03105 PF00291 Pyridoxal-phosphate dependent enzyme CTI08_RS03130 PF00290 Tryptophan synthase alpha chain CTI08_RS03135 PF01039 Carboxyl transferase domain CTI08_RS03140 PF08245 Mur ligase middle domain CTI08_RS03140 PF02875 Mur ligase family, glutamate ligase domain CTI08_RS03155 PF00753 Metallo-beta-lactamase superfamily CTI08_RS03160 PF10417 C-terminal domain of 1-Cys peroxiredoxin CTI08_RS03160 PF00578 AhpC/TSA family CTI08_RS03165 PF07516 SecA Wing and Scaffold domain CTI08_RS03165 PF07517 SecA DEAD-like domain CTI08_RS03165 PF02810 SEC-C motif CTI08_RS03165 PF01043 SecA preprotein cross-linking domain CTI08_RS03175 PF07690 Major Facilitator Superfamily CTI08_RS03175 PF00083 Sugar (and other) transporter CTI08_RS03180 PF03006 Haemolysin-III related CTI08_RS03205 PF00378 Enoyl-CoA hydratase/isomerase CTI08_RS03205 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CTI08_RS03205 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CTI08_RS03210 PF00108 Thiolase, N-terminal domain CTI08_RS03210 PF02803 Thiolase, C-terminal domain CTI08_RS03215 PF02311 AraC-like ligand binding domain CTI08_RS03215 PF12833 Helix-turn-helix domain CTI08_RS03220 PF02515 CoA-transferase family III CTI08_RS03225 PF04966 Carbohydrate-selective porin, OprB family CTI08_RS03230 PF01011 PQQ enzyme repeat CTI08_RS03235 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CTI08_RS03235 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CTI08_RS03245 PF00893 Small Multidrug Resistance protein CTI08_RS03255 PF02803 Thiolase, C-terminal domain CTI08_RS03255 PF00108 Thiolase, N-terminal domain CTI08_RS03265 PF13505 Outer membrane protein beta-barrel domain CTI08_RS03265 PF00691 OmpA family CTI08_RS03275 PF01139 tRNA-splicing ligase RtcB CTI08_RS03280 PF00324 Amino acid permease CTI08_RS03285 PF08468 Methyltransferase small domain N-terminal CTI08_RS03285 PF05175 Methyltransferase small domain CTI08_RS03290 PF00860 Permease family CTI08_RS03295 PF00679 Elongation factor G C-terminus CTI08_RS03295 PF03144 Elongation factor Tu domain 2 CTI08_RS03295 PF00009 Elongation factor Tu GTP binding domain CTI08_RS03300 PF01741 Large-conductance mechanosensitive channel, MscL CTI08_RS03315 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CTI08_RS03315 PF06827 Zinc finger found in FPG and IleRS CTI08_RS03315 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CTI08_RS03320 PF02245 Methylpurine-DNA glycosylase (MPG) CTI08_RS03325 PF07715 TonB-dependent Receptor Plug Domain CTI08_RS03325 PF00593 TonB dependent receptor CTI08_RS03330 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CTI08_RS03335 PF03547 Membrane transport protein CTI08_RS03345 PF13098 Thioredoxin-like domain CTI08_RS03345 PF10411 Disulfide bond isomerase protein N-terminus CTI08_RS03350 PF01571 Aminomethyltransferase folate-binding domain CTI08_RS03360 PF04343 Protein of unknown function, DUF488 CTI08_RS03365 PF08274 PhnA Zinc-Ribbon CTI08_RS03365 PF03831 PhnA domain CTI08_RS03370 PF07411 Domain of unknown function (DUF1508) CTI08_RS03375 PF04073 Aminoacyl-tRNA editing domain CTI08_RS03375 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CTI08_RS03375 PF03129 Anticodon binding domain CTI08_RS03380 PF00873 AcrB/AcrD/AcrF family CTI08_RS03405 PF00072 Response regulator receiver domain CTI08_RS03410 PF00072 Response regulator receiver domain CTI08_RS03415 PF01584 CheW-like domain CTI08_RS03420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CTI08_RS03420 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CTI08_RS03425 PF01584 CheW-like domain CTI08_RS03425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTI08_RS03425 PF01627 Hpt domain CTI08_RS03425 PF00072 Response regulator receiver domain CTI08_RS03435 PF07687 Peptidase dimerisation domain CTI08_RS03435 PF01546 Peptidase family M20/M25/M40 CTI08_RS03440 PF08085 Entericidin EcnA/B family CTI08_RS03450 PF04304 Protein of unknown function (DUF454) CTI08_RS03455 PF17969 L,D-transpeptidase C-terminal domain CTI08_RS03455 PF03734 L,D-transpeptidase catalytic domain CTI08_RS03495 PF00175 Oxidoreductase NAD-binding domain CTI08_RS03495 PF00258 Flavodoxin CTI08_RS03495 PF00667 FAD binding domain CTI08_RS03505 PF12805 FUSC-like inner membrane protein yccS CTI08_RS03510 PF07690 Major Facilitator Superfamily CTI08_RS03515 PF00881 Nitroreductase family CTI08_RS03530 PF01235 Sodium:alanine symporter family CTI08_RS03535 PF01734 Patatin-like phospholipase CTI08_RS03540 PF13291 ACT domain CTI08_RS03540 PF00291 Pyridoxal-phosphate dependent enzyme CTI08_RS03545 PF05992 SbmA/BacA-like family CTI08_RS03575 PF02934 GatB/GatE catalytic domain CTI08_RS03575 PF02637 GatB domain CTI08_RS03580 PF01425 Amidase CTI08_RS03585 PF02686 Glu-tRNAGln amidotransferase C subunit CTI08_RS03595 PF04085 rod shape-determining protein MreC CTI08_RS03600 PF04093 rod shape-determining protein MreD CTI08_RS03605 PF02545 Maf-like protein CTI08_RS03610 PF00575 S1 RNA binding domain CTI08_RS03610 PF10150 Ribonuclease E/G family CTI08_RS03620 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain CTI08_RS03620 PF06974 Protein of unknown function (DUF1298) CTI08_RS03625 PF01507 Phosphoadenosine phosphosulfate reductase family CTI08_RS03640 PF02525 Flavodoxin-like fold CTI08_RS03660 PF02673 Bacitracin resistance protein BacA CTI08_RS03665 PF12833 Helix-turn-helix domain CTI08_RS03665 PF06719 AraC-type transcriptional regulator N-terminus CTI08_RS03670 PF14765 Polyketide synthase dehydratase CTI08_RS03670 PF00109 Beta-ketoacyl synthase, N-terminal domain CTI08_RS03670 PF16197 Ketoacyl-synthetase C-terminal extension CTI08_RS03670 PF09277 Erythronolide synthase, docking CTI08_RS03670 PF02801 Beta-ketoacyl synthase, C-terminal domain CTI08_RS03670 PF08659 KR domain CTI08_RS03670 PF08990 Erythronolide synthase docking CTI08_RS03670 PF00550 Phosphopantetheine attachment site CTI08_RS03670 PF00698 Acyl transferase domain CTI08_RS03670 PF08240 Alcohol dehydrogenase GroES-like domain CTI08_RS03675 PF01965 DJ-1/PfpI family CTI08_RS03685 PF00324 Amino acid permease CTI08_RS03690 PF04303 PrpF protein CTI08_RS03695 PF00348 Polyprenyl synthetase CTI08_RS03700 PF04237 YjbR CTI08_RS03705 PF01145 SPFH domain / Band 7 family CTI08_RS03715 PF01734 Patatin-like phospholipase CTI08_RS03735 PF08019 Phosphoethanolamine transferase EptA/EptB CTI08_RS03735 PF00884 Sulfatase CTI08_RS03740 PF00072 Response regulator receiver domain CTI08_RS03740 PF00486 Transcriptional regulatory protein, C terminal CTI08_RS03745 PF08521 Two-component sensor kinase N-terminal CTI08_RS03745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTI08_RS03745 PF00512 His Kinase A (phospho-acceptor) domain CTI08_RS03755 PF00909 Ammonium Transporter Family CTI08_RS03785 PF10458 Valyl tRNA synthetase tRNA binding arm CTI08_RS03785 PF08264 Anticodon-binding domain of tRNA CTI08_RS03785 PF00133 tRNA synthetases class I (I, L, M and V) CTI08_RS03805 PF01906 Putative heavy-metal-binding CTI08_RS03810 PF01906 Putative heavy-metal-binding CTI08_RS03815 PF02321 Outer membrane efflux protein CTI08_RS03820 PF00873 AcrB/AcrD/AcrF family CTI08_RS03825 PF00529 HlyD membrane-fusion protein of T1SS CTI08_RS03825 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CTI08_RS03830 PF01569 PAP2 superfamily CTI08_RS03840 PF00348 Polyprenyl synthetase CTI08_RS03850 PF00829 Ribosomal prokaryotic L21 protein CTI08_RS03855 PF01016 Ribosomal L27 protein CTI08_RS03860 PF03548 Outer membrane lipoprotein carrier protein LolA CTI08_RS03870 PF02403 Seryl-tRNA synthetase N-terminal domain CTI08_RS03870 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CTI08_RS03875 PF14824 Sirohaem biosynthesis protein central CTI08_RS03875 PF10414 Sirohaem synthase dimerisation region CTI08_RS03875 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CTI08_RS03880 PF00588 SpoU rRNA Methylase family CTI08_RS03885 PF01638 HxlR-like helix-turn-helix CTI08_RS03890 PF03358 NADPH-dependent FMN reductase CTI08_RS03895 PF13520 Amino acid permease CTI08_RS03900 PF00465 Iron-containing alcohol dehydrogenase CTI08_RS03910 PF03099 Biotin/lipoate A/B protein ligase family CTI08_RS03915 PF04359 Protein of unknown function (DUF493) CTI08_RS03920 PF04546 Sigma-70, non-essential region CTI08_RS03920 PF03979 Sigma-70 factor, region 1.1 CTI08_RS03920 PF00140 Sigma-70 factor, region 1.2 CTI08_RS03920 PF04539 Sigma-70 region 3 CTI08_RS03920 PF04542 Sigma-70 region 2 CTI08_RS03920 PF04545 Sigma-70, region 4 CTI08_RS03940 PF17773 UPF0176 acylphosphatase like domain CTI08_RS03940 PF00581 Rhodanese-like domain CTI08_RS03950 PF00285 Citrate synthase, C-terminal domain CTI08_RS03955 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CTI08_RS03960 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CTI08_RS03965 PF02910 Fumarate reductase flavoprotein C-term CTI08_RS03965 PF00890 FAD binding domain CTI08_RS03970 PF13085 2Fe-2S iron-sulfur cluster binding domain CTI08_RS03985 PF00676 Dehydrogenase E1 component CTI08_RS03985 PF16078 2-oxoglutarate dehydrogenase N-terminus CTI08_RS03985 PF16870 2-oxoglutarate dehydrogenase C-terminal CTI08_RS03985 PF02779 Transketolase, pyrimidine binding domain CTI08_RS03990 PF00364 Biotin-requiring enzyme CTI08_RS03990 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CTI08_RS03990 PF02817 e3 binding domain CTI08_RS03995 PF07992 Pyridine nucleotide-disulphide oxidoreductase CTI08_RS03995 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CTI08_RS04000 PF08442 ATP-grasp domain CTI08_RS04000 PF00549 CoA-ligase CTI08_RS04005 PF00549 CoA-ligase CTI08_RS04005 PF02629 CoA binding domain CTI08_RS04010 PF00579 tRNA synthetases class I (W and Y) CTI08_RS04015 PF05661 Protein of unknown function (DUF808) CTI08_RS04020 PF04228 Putative neutral zinc metallopeptidase CTI08_RS04025 PF00999 Sodium/hydrogen exchanger family CTI08_RS04040 PF09587 Bacterial capsule synthesis protein PGA_cap CTI08_RS04050 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CTI08_RS04055 PF00582 Universal stress protein family CTI08_RS04060 PF00132 Bacterial transferase hexapeptide (six repeats) CTI08_RS04065 PF01272 Transcription elongation factor, GreA/GreB, C-term CTI08_RS04065 PF03449 Transcription elongation factor, N-terminal CTI08_RS04070 PF02142 MGS-like domain CTI08_RS04070 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CTI08_RS04070 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CTI08_RS04075 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CTI08_RS04075 PF00117 Glutamine amidotransferase class-I CTI08_RS04090 PF01985 CRS1 / YhbY (CRM) domain CTI08_RS04095 PF01728 FtsJ-like methyltransferase CTI08_RS04100 PF00004 ATPase family associated with various cellular activities (AAA) CTI08_RS04100 PF06480 FtsH Extracellular CTI08_RS04100 PF01434 Peptidase family M41 CTI08_RS04100 PF17862 AAA+ lid domain CTI08_RS04125 PF09423 PhoD-like phosphatase CTI08_RS04125 PF16655 PhoD-like phosphatase, N-terminal domain CTI08_RS04140 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CTI08_RS04140 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CTI08_RS04155 PF00083 Sugar (and other) transporter CTI08_RS04160 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CTI08_RS04160 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CTI08_RS04165 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CTI08_RS04165 PF01266 FAD dependent oxidoreductase CTI08_RS04170 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain CTI08_RS04170 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain CTI08_RS04175 PF00781 Diacylglycerol kinase catalytic domain CTI08_RS04180 PF00149 Calcineurin-like phosphoesterase CTI08_RS04190 PF00166 Chaperonin 10 Kd subunit CTI08_RS04195 PF00118 TCP-1/cpn60 chaperonin family CTI08_RS04200 PF01219 Prokaryotic diacylglycerol kinase CTI08_RS04205 PF00753 Metallo-beta-lactamase superfamily CTI08_RS04210 PF03009 Glycerophosphoryl diester phosphodiesterase family CTI08_RS04215 PF00873 AcrB/AcrD/AcrF family CTI08_RS04225 PF01435 Peptidase family M48 CTI08_RS04230 PF01464 Transglycosylase SLT domain CTI08_RS04240 PF01171 PP-loop family CTI08_RS04250 PF00497 Bacterial extracellular solute-binding proteins, family 3 CTI08_RS04250 PF01464 Transglycosylase SLT domain CTI08_RS04255 PF01272 Transcription elongation factor, GreA/GreB, C-term CTI08_RS04255 PF03449 Transcription elongation factor, N-terminal CTI08_RS04270 PF00668 Condensation domain CTI08_RS04270 PF13193 AMP-binding enzyme C-terminal domain CTI08_RS04270 PF00550 Phosphopantetheine attachment site CTI08_RS04270 PF00975 Thioesterase domain CTI08_RS04270 PF00501 AMP-binding enzyme CTI08_RS04300 PF00881 Nitroreductase family CTI08_RS04315 PF02595 Glycerate kinase family CTI08_RS04320 PF00384 Molybdopterin oxidoreductase CTI08_RS04325 PF02634 FdhD/NarQ family CTI08_RS04330 PF06803 Protein of unknown function (DUF1232) CTI08_RS04335 PF11890 Domain of unknown function (DUF3410) CTI08_RS04335 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CTI08_RS04335 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CTI08_RS04340 PF00152 tRNA synthetases class II (D, K and N) CTI08_RS04350 PF18073 Rubredoxin metal binding domain CTI08_RS04355 PF00324 Amino acid permease CTI08_RS04365 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CTI08_RS04365 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CTI08_RS04370 PF01678 Diaminopimelate epimerase CTI08_RS04375 PF01810 LysE type translocator CTI08_RS04380 PF02899 Phage integrase, N-terminal SAM-like domain CTI08_RS04380 PF00589 Phage integrase family CTI08_RS04385 PF01012 Electron transfer flavoprotein domain CTI08_RS04390 PF00766 Electron transfer flavoprotein FAD-binding domain CTI08_RS04390 PF01012 Electron transfer flavoprotein domain CTI08_RS04395 PF03989 DNA gyrase C-terminal domain, beta-propeller CTI08_RS04395 PF00521 DNA gyrase/topoisomerase IV, subunit A CTI08_RS04410 PF00535 Glycosyl transferase family 2 CTI08_RS04430 PF13533 Biotin-lipoyl like CTI08_RS04440 PF00266 Aminotransferase class-V CTI08_RS04450 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CTI08_RS04460 PF12704 MacB-like periplasmic core domain CTI08_RS04460 PF02687 FtsX-like permease family CTI08_RS04465 PF00005 ABC transporter CTI08_RS04470 PF03772 Competence protein CTI08_RS04470 PF13567 Domain of unknown function (DUF4131) CTI08_RS04470 PF00753 Metallo-beta-lactamase superfamily CTI08_RS04480 PF01343 Peptidase family S49 CTI08_RS04480 PF06965 Na+/H+ antiporter 1 CTI08_RS04485 PF12697 Alpha/beta hydrolase family CTI08_RS04490 PF00551 Formyl transferase CTI08_RS04495 PF02769 AIR synthase related protein, C-terminal domain CTI08_RS04495 PF00586 AIR synthase related protein, N-terminal domain CTI08_RS04500 PF01594 AI-2E family transporter CTI08_RS04505 PF11638 DnaA N-terminal domain CTI08_RS04505 PF08299 Bacterial dnaA protein helix-turn-helix CTI08_RS04505 PF00308 Bacterial dnaA protein CTI08_RS04535 PF00588 SpoU rRNA Methylase family CTI08_RS04535 PF08032 RNA 2'-O ribose methyltransferase substrate binding CTI08_RS04540 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CTI08_RS04550 PF00691 OmpA family CTI08_RS04555 PF04052 TolB amino-terminal domain CTI08_RS04555 PF07676 WD40-like Beta Propeller Repeat CTI08_RS04565 PF02472 Biopolymer transport protein ExbD/TolR CTI08_RS04570 PF01618 MotA/TolQ/ExbB proton channel family CTI08_RS04575 PF03061 Thioesterase superfamily CTI08_RS04580 PF07687 Peptidase dimerisation domain CTI08_RS04580 PF01546 Peptidase family M20/M25/M40 CTI08_RS04585 PF05496 Holliday junction DNA helicase RuvB P-loop domain CTI08_RS04585 PF05491 RuvB C-terminal winged helix domain CTI08_RS04585 PF17864 RuvB AAA lid domain CTI08_RS04590 PF07499 RuvA, C-terminal domain CTI08_RS04590 PF01330 RuvA N terminal domain CTI08_RS04595 PF01966 HD domain CTI08_RS04600 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal CTI08_RS04600 PF02769 AIR synthase related protein, C-terminal domain CTI08_RS04600 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CTI08_RS04605 PF07690 Major Facilitator Superfamily CTI08_RS04610 PF01784 NIF3 (NGG1p interacting factor 3) CTI08_RS04615 PF00378 Enoyl-CoA hydratase/isomerase CTI08_RS04620 PF00293 NUDIX domain CTI08_RS04620 PF01467 Cytidylyltransferase-like CTI08_RS04630 PF00578 AhpC/TSA family CTI08_RS04645 PF06508 Queuosine biosynthesis protein QueC CTI08_RS04655 PF14602 Hexapeptide repeat of succinyl-transferase CTI08_RS04655 PF00132 Bacterial transferase hexapeptide (six repeats) CTI08_RS04655 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CTI08_RS04665 PF03466 LysR substrate binding domain CTI08_RS04665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTI08_RS04670 PF12857 TOBE-like domain CTI08_RS04670 PF00005 ABC transporter CTI08_RS04675 PF00528 Binding-protein-dependent transport system inner membrane component CTI08_RS04680 PF00528 Binding-protein-dependent transport system inner membrane component CTI08_RS04695 PF01063 Amino-transferase class IV CTI08_RS04700 PF02618 YceG-like family CTI08_RS04705 PF02223 Thymidylate kinase CTI08_RS04715 PF00890 FAD binding domain CTI08_RS04715 PF02910 Fumarate reductase flavoprotein C-term CTI08_RS04720 PF13180 PDZ domain CTI08_RS04730 PF00679 Elongation factor G C-terminus CTI08_RS04730 PF00009 Elongation factor Tu GTP binding domain CTI08_RS04730 PF03144 Elongation factor Tu domain 2 CTI08_RS04730 PF06421 GTP-binding protein LepA C-terminus CTI08_RS04735 PF10502 Signal peptidase, peptidase S26 CTI08_RS04745 PF14622 Ribonuclease-III-like CTI08_RS04745 PF00035 Double-stranded RNA binding motif CTI08_RS04750 PF07650 KH domain CTI08_RS04750 PF01926 50S ribosome-binding GTPase CTI08_RS04760 PF11967 Recombination protein O N terminal CTI08_RS04760 PF02565 Recombination protein O C terminal CTI08_RS04765 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CTI08_RS04770 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) CTI08_RS04775 PF00106 short chain dehydrogenase CTI08_RS04805 PF00155 Aminotransferase class I and II CTI08_RS04815 PF17151 Periplasmic sensor domain CTI08_RS04815 PF00990 Diguanylate cyclase, GGDEF domain CTI08_RS04825 PF17757 UvrB interaction domain CTI08_RS04825 PF12344 Ultra-violet resistance protein B CTI08_RS04825 PF02151 UvrB/uvrC motif CTI08_RS04825 PF04851 Type III restriction enzyme, res subunit CTI08_RS04825 PF00271 Helicase conserved C-terminal domain CTI08_RS04835 PF00892 EamA-like transporter family CTI08_RS04840 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CTI08_RS04840 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CTI08_RS04855 PF01018 GTP1/OBG CTI08_RS04855 PF01926 50S ribosome-binding GTPase CTI08_RS04860 PF00696 Amino acid kinase family CTI08_RS04860 PF01472 PUA domain CTI08_RS04870 PF07759 Protein of unknown function (DUF1615) CTI08_RS04875 PF01207 Dihydrouridine synthase (Dus) CTI08_RS04880 PF03060 Nitronate monooxygenase CTI08_RS04895 PF02350 UDP-N-acetylglucosamine 2-epimerase CTI08_RS04925 PF03441 FAD binding domain of DNA photolyase CTI08_RS04925 PF00875 DNA photolyase CTI08_RS04930 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CTI08_RS04935 PF07992 Pyridine nucleotide-disulphide oxidoreductase CTI08_RS04940 PF00768 D-alanyl-D-alanine carboxypeptidase CTI08_RS04940 PF07943 Penicillin-binding protein 5, C-terminal domain CTI08_RS04950 PF03971 Monomeric isocitrate dehydrogenase CTI08_RS04955 PF00849 RNA pseudouridylate synthase CTI08_RS04960 PF00180 Isocitrate/isopropylmalate dehydrogenase CTI08_RS04980 PF06779 Uncharacterised MFS-type transporter YbfB CTI08_RS04985 PF03466 LysR substrate binding domain CTI08_RS04985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTI08_RS04990 PF00375 Sodium:dicarboxylate symporter family CTI08_RS04995 PF02567 Phenazine biosynthesis-like protein CTI08_RS05000 PF05193 Peptidase M16 inactive domain CTI08_RS05000 PF00675 Insulinase (Peptidase family M16) CTI08_RS05025 PF02581 Thiamine monophosphate synthase CTI08_RS05030 PF00202 Aminotransferase class-III CTI08_RS05040 PF00849 RNA pseudouridylate synthase CTI08_RS05045 PF00271 Helicase conserved C-terminal domain CTI08_RS05045 PF18337 RapA N-terminal Tudor like domain CTI08_RS05045 PF18339 RapA N-terminal Tudor like domain 1 CTI08_RS05045 PF00176 SNF2 family N-terminal domain CTI08_RS05045 PF12137 RNA polymerase recycling family C-terminal CTI08_RS05055 PF00440 Bacterial regulatory proteins, tetR family CTI08_RS05060 PF00970 Oxidoreductase FAD-binding domain CTI08_RS05060 PF00111 2Fe-2S iron-sulfur cluster binding domain CTI08_RS05060 PF00175 Oxidoreductase NAD-binding domain CTI08_RS05065 PF00487 Fatty acid desaturase CTI08_RS05075 PF17754 MftR C-terminal domain CTI08_RS05075 PF00440 Bacterial regulatory proteins, tetR family CTI08_RS05085 PF00202 Aminotransferase class-III CTI08_RS05090 PF00282 Pyridoxal-dependent decarboxylase conserved domain CTI08_RS05095 PF00171 Aldehyde dehydrogenase family CTI08_RS05100 PF01037 Lrp/AsnC ligand binding domain CTI08_RS05105 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CTI08_RS05105 PF00205 Thiamine pyrophosphate enzyme, central domain CTI08_RS05105 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CTI08_RS05110 PF00324 Amino acid permease CTI08_RS05115 PF12849 PBP superfamily domain CTI08_RS05120 PF00528 Binding-protein-dependent transport system inner membrane component CTI08_RS05125 PF00528 Binding-protein-dependent transport system inner membrane component CTI08_RS05130 PF00005 ABC transporter CTI08_RS05135 PF01343 Peptidase family S49 CTI08_RS05135 PF08496 Peptidase family S49 N-terminal CTI08_RS05150 PF08328 Adenylosuccinate lyase C-terminal CTI08_RS05150 PF00206 Lyase CTI08_RS05155 PF04356 Protein of unknown function (DUF489) CTI08_RS05165 PF13344 Haloacid dehalogenase-like hydrolase CTI08_RS05165 PF00293 NUDIX domain CTI08_RS05170 PF00132 Bacterial transferase hexapeptide (six repeats) CTI08_RS05175 PF07943 Penicillin-binding protein 5, C-terminal domain CTI08_RS05175 PF00768 D-alanyl-D-alanine carboxypeptidase CTI08_RS05190 PF01975 Survival protein SurE CTI08_RS05195 PF01476 LysM domain CTI08_RS05195 PF01551 Peptidase family M23 CTI08_RS05200 PF03466 LysR substrate binding domain CTI08_RS05200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTI08_RS05205 PF13654 AAA domain CTI08_RS05205 PF05362 Lon protease (S16) C-terminal proteolytic domain CTI08_RS05210 PF07690 Major Facilitator Superfamily CTI08_RS05215 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CTI08_RS05220 PF13593 SBF-like CPA transporter family (DUF4137) CTI08_RS05225 PF01197 Ribosomal protein L31 CTI08_RS05240 PF04055 Radical SAM superfamily CTI08_RS05245 PF08207 Elongation factor P (EF-P) KOW-like domain CTI08_RS05245 PF09285 Elongation factor P, C-terminal CTI08_RS05245 PF01132 Elongation factor P (EF-P) OB domain CTI08_RS05250 PF02554 Carbon starvation protein CstA CTI08_RS05250 PF13722 5TM C-terminal transporter carbon starvation CstA CTI08_RS05255 PF04328 Selenoprotein, putative CTI08_RS05290 PF13556 PucR C-terminal helix-turn-helix domain CTI08_RS05290 PF17853 GGDEF-like domain CTI08_RS05290 PF06018 CodY GAF-like domain CTI08_RS05305 PF00171 Aldehyde dehydrogenase family CTI08_RS05310 PF00324 Amino acid permease CTI08_RS05315 PF03466 LysR substrate binding domain CTI08_RS05315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTI08_RS05320 PF02028 BCCT, betaine/carnitine/choline family transporter CTI08_RS05325 PF02028 BCCT, betaine/carnitine/choline family transporter CTI08_RS05330 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CTI08_RS05330 PF00355 Rieske [2Fe-2S] domain CTI08_RS05335 PF00171 Aldehyde dehydrogenase family CTI08_RS05340 PF18113 Rubredoxin binding C-terminal domain CTI08_RS05340 PF07992 Pyridine nucleotide-disulphide oxidoreductase CTI08_RS05345 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CTI08_RS05345 PF01266 FAD dependent oxidoreductase CTI08_RS05365 PF00892 EamA-like transporter family CTI08_RS05375 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system CTI08_RS05380 PF00083 Sugar (and other) transporter CTI08_RS05385 PF13378 Enolase C-terminal domain-like CTI08_RS05385 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CTI08_RS05390 PF16197 Ketoacyl-synthetase C-terminal extension CTI08_RS05390 PF08990 Erythronolide synthase docking CTI08_RS05390 PF08240 Alcohol dehydrogenase GroES-like domain CTI08_RS05390 PF00698 Acyl transferase domain CTI08_RS05390 PF02801 Beta-ketoacyl synthase, C-terminal domain CTI08_RS05390 PF08659 KR domain CTI08_RS05390 PF00550 Phosphopantetheine attachment site CTI08_RS05390 PF14765 Polyketide synthase dehydratase CTI08_RS05390 PF09277 Erythronolide synthase, docking CTI08_RS05390 PF00109 Beta-ketoacyl synthase, N-terminal domain CTI08_RS05395 PF00440 Bacterial regulatory proteins, tetR family CTI08_RS05415 PF02678 Pirin CTI08_RS05415 PF17954 Quercetinase C-terminal cupin domain CTI08_RS05425 PF13309 HTH domain CTI08_RS05425 PF08348 YheO-like PAS domain CTI08_RS05540 PF04233 Phage Mu protein F like protein CTI08_RS05545 PF06074 Protein of unknown function (DUF935) CTI08_RS05560 PF03237 Terminase-like family CTI08_RS05595 PF10502 Signal peptidase, peptidase S26 CTI08_RS05620 PF01471 Putative peptidoglycan binding domain CTI08_RS05620 PF13401 AAA domain CTI08_RS05650 PF00216 Bacterial DNA-binding protein CTI08_RS05695 PF00501 AMP-binding enzyme CTI08_RS05695 PF13193 AMP-binding enzyme C-terminal domain CTI08_RS05695 PF00668 Condensation domain CTI08_RS05695 PF00550 Phosphopantetheine attachment site CTI08_RS05700 PF00501 AMP-binding enzyme CTI08_RS05700 PF00550 Phosphopantetheine attachment site CTI08_RS05700 PF00975 Thioesterase domain CTI08_RS05700 PF13193 AMP-binding enzyme C-terminal domain CTI08_RS05700 PF00668 Condensation domain CTI08_RS05705 PF01032 FecCD transport family CTI08_RS05710 PF01032 FecCD transport family CTI08_RS05715 PF00005 ABC transporter CTI08_RS05720 PF01497 Periplasmic binding protein CTI08_RS05725 PF07715 TonB-dependent Receptor Plug Domain CTI08_RS05725 PF00593 TonB dependent receptor CTI08_RS05730 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) CTI08_RS05735 PF00668 Condensation domain CTI08_RS05735 PF00501 AMP-binding enzyme CTI08_RS05735 PF00550 Phosphopantetheine attachment site CTI08_RS05740 PF13193 AMP-binding enzyme C-terminal domain CTI08_RS05740 PF00501 AMP-binding enzyme CTI08_RS05745 PF00550 Phosphopantetheine attachment site CTI08_RS05745 PF00857 Isochorismatase family CTI08_RS05750 PF00282 Pyridoxal-dependent decarboxylase conserved domain CTI08_RS05760 PF00005 ABC transporter CTI08_RS05765 PF00005 ABC transporter CTI08_RS05770 PF00975 Thioesterase domain CTI08_RS05780 PF00425 chorismate binding enzyme CTI08_RS05790 PF01208 Uroporphyrinogen decarboxylase (URO-D) CTI08_RS05795 PF05675 Protein of unknown function (DUF817) CTI08_RS05820 PF00144 Beta-lactamase CTI08_RS05830 PF01227 GTP cyclohydrolase I CTI08_RS05835 PF00111 2Fe-2S iron-sulfur cluster binding domain CTI08_RS05835 PF01799 [2Fe-2S] binding domain CTI08_RS05840 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CTI08_RS05840 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CTI08_RS05855 PF00218 Indole-3-glycerol phosphate synthase CTI08_RS05860 PF00591 Glycosyl transferase family, a/b domain CTI08_RS05860 PF02885 Glycosyl transferase family, helical bundle domain CTI08_RS05865 PF00593 TonB dependent receptor CTI08_RS05865 PF07715 TonB-dependent Receptor Plug Domain CTI08_RS05870 PF01433 Peptidase family M1 domain CTI08_RS05870 PF11838 ERAP1-like C-terminal domain CTI08_RS05875 PF00117 Glutamine amidotransferase class-I CTI08_RS06185 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system CTI08_RS06195 PF01551 Peptidase family M23 CTI08_RS06195 PF01464 Transglycosylase SLT domain CTI08_RS06195 PF10145 Phage-related minor tail protein CTI08_RS06245 PF08019 Phosphoethanolamine transferase EptA/EptB CTI08_RS06245 PF00884 Sulfatase CTI08_RS06280 PF05195 Aminopeptidase P, N-terminal domain CTI08_RS06280 PF00557 Metallopeptidase family M24 CTI08_RS06285 PF01494 FAD binding domain CTI08_RS06290 PF01494 FAD binding domain CTI08_RS06300 PF13411 MerR HTH family regulatory protein CTI08_RS06310 PF01810 LysE type translocator CTI08_RS06315 PF03466 LysR substrate binding domain CTI08_RS06315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTI08_RS06325 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CTI08_RS06330 PF02021 Uncharacterised protein family UPF0102 CTI08_RS06335 PF04972 BON domain CTI08_RS06345 PF09297 NADH pyrophosphatase zinc ribbon domain CTI08_RS06345 PF00293 NUDIX domain CTI08_RS06355 PF00929 Exonuclease CTI08_RS06360 PF01476 LysM domain CTI08_RS06360 PF01476 LysM domain CTI08_RS06360 PF01464 Transglycosylase SLT domain CTI08_RS06360 PF01464 Transglycosylase SLT domain CTI08_RS06365 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CTI08_RS06370 PF00528 Binding-protein-dependent transport system inner membrane component CTI08_RS06375 PF12911 N-terminal TM domain of oligopeptide transport permease C CTI08_RS06375 PF00528 Binding-protein-dependent transport system inner membrane component CTI08_RS06380 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CTI08_RS06380 PF00005 ABC transporter CTI08_RS06385 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CTI08_RS06385 PF07992 Pyridine nucleotide-disulphide oxidoreductase CTI08_RS06390 PF00593 TonB dependent receptor CTI08_RS06390 PF07715 TonB-dependent Receptor Plug Domain CTI08_RS06400 PF00929 Exonuclease CTI08_RS06405 PF01979 Amidohydrolase family CTI08_RS06410 PF00563 EAL domain CTI08_RS06410 PF00990 Diguanylate cyclase, GGDEF domain CTI08_RS06410 PF01590 GAF domain CTI08_RS06410 PF00360 Phytochrome region CTI08_RS06415 PF00764 Arginosuccinate synthase CTI08_RS06420 PF07992 Pyridine nucleotide-disulphide oxidoreductase CTI08_RS06420 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CTI08_RS06435 PF05987 Bacterial protein of unknown function (DUF898) CTI08_RS06440 PF03180 NLPA lipoprotein CTI08_RS06460 PF13610 DDE domain CTI08_RS06480 PF00583 Acetyltransferase (GNAT) family CTI08_RS06490 PF13610 DDE domain CTI08_RS06500 PF00106 short chain dehydrogenase CTI08_RS06510 PF00440 Bacterial regulatory proteins, tetR family CTI08_RS06510 PF17932 Tetracyclin repressor-like, C-terminal domain CTI08_RS06515 PF02678 Pirin CTI08_RS06515 PF17954 Quercetinase C-terminal cupin domain CTI08_RS06525 PF00106 short chain dehydrogenase CTI08_RS06530 PF00743 Flavin-binding monooxygenase-like CTI08_RS06540 PF00860 Permease family CTI08_RS06545 PF00962 Adenosine/AMP deaminase CTI08_RS06550 PF01292 Prokaryotic cytochrome b561 CTI08_RS06560 PF01351 Ribonuclease HII CTI08_RS06565 PF02599 Global regulator protein family CTI08_RS06570 PF13840 ACT domain CTI08_RS06570 PF01842 ACT domain CTI08_RS06570 PF00696 Amino acid kinase family CTI08_RS06625 PF00717 Peptidase S24-like CTI08_RS06625 PF01726 LexA DNA binding domain CTI08_RS06630 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT CTI08_RS06720 PF06381 Protein of unknown function (DUF1073) CTI08_RS06735 PF09979 Uncharacterized protein conserved in bacteria (DUF2213) CTI08_RS06850 PF13438 Domain of unknown function (DUF4113) CTI08_RS06850 PF00817 impB/mucB/samB family CTI08_RS06850 PF11799 impB/mucB/samB family C-terminal domain CTI08_RS06855 PF00717 Peptidase S24-like CTI08_RS06910 PF00083 Sugar (and other) transporter CTI08_RS06915 PF00701 Dihydrodipicolinate synthetase family CTI08_RS06940 PF13520 Amino acid permease CTI08_RS06945 PF02574 Homocysteine S-methyltransferase CTI08_RS06955 PF06039 Malate:quinone oxidoreductase (Mqo) CTI08_RS06960 PF00732 GMC oxidoreductase CTI08_RS06960 PF05199 GMC oxidoreductase CTI08_RS06965 PF00171 Aldehyde dehydrogenase family CTI08_RS06970 PF00440 Bacterial regulatory proteins, tetR family CTI08_RS06970 PF13977 BetI-type transcriptional repressor, C-terminal CTI08_RS06975 PF02028 BCCT, betaine/carnitine/choline family transporter CTI08_RS06980 PF02028 BCCT, betaine/carnitine/choline family transporter CTI08_RS06990 PF03061 Thioesterase superfamily CTI08_RS07000 PF02492 CobW/HypB/UreG, nucleotide-binding domain CTI08_RS07000 PF07683 Cobalamin synthesis protein cobW C-terminal domain CTI08_RS07005 PF00375 Sodium:dicarboxylate symporter family CTI08_RS07010 PF07152 YaeQ protein CTI08_RS07015 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CTI08_RS07020 PF01522 Polysaccharide deacetylase CTI08_RS07020 PF14883 Hypothetical glycosyl hydrolase family 13 CTI08_RS07025 PF00535 Glycosyl transferase family 2 CTI08_RS07035 PF00378 Enoyl-CoA hydratase/isomerase CTI08_RS07050 PF09339 IclR helix-turn-helix domain CTI08_RS07050 PF01614 Bacterial transcriptional regulator CTI08_RS07055 PF00355 Rieske [2Fe-2S] domain CTI08_RS07065 PF00355 Rieske [2Fe-2S] domain CTI08_RS07075 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CTI08_RS07080 PF14759 Reductase C-terminal CTI08_RS07080 PF07992 Pyridine nucleotide-disulphide oxidoreductase CTI08_RS07085 PF07690 Major Facilitator Superfamily CTI08_RS07095 PF12697 Alpha/beta hydrolase family CTI08_RS07105 PF03447 Homoserine dehydrogenase, NAD binding domain CTI08_RS07105 PF01958 Domain of unknown function DUF108 CTI08_RS07110 PF00171 Aldehyde dehydrogenase family CTI08_RS07115 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CTI08_RS07115 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CTI08_RS07115 PF00205 Thiamine pyrophosphate enzyme, central domain CTI08_RS07125 PF07690 Major Facilitator Superfamily CTI08_RS07130 PF01327 Polypeptide deformylase CTI08_RS07135 PF04960 Glutaminase CTI08_RS07140 PF12833 Helix-turn-helix domain CTI08_RS07140 PF02311 AraC-like ligand binding domain CTI08_RS07145 PF07690 Major Facilitator Superfamily CTI08_RS07150 PF01263 Aldose 1-epimerase CTI08_RS07165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTI08_RS07165 PF03466 LysR substrate binding domain CTI08_RS07175 PF07690 Major Facilitator Superfamily CTI08_RS07180 PF00456 Transketolase, thiamine diphosphate binding domain CTI08_RS07185 PF02779 Transketolase, pyrimidine binding domain CTI08_RS07185 PF02780 Transketolase, C-terminal domain CTI08_RS07190 PF02574 Homocysteine S-methyltransferase CTI08_RS07190 PF00809 Pterin binding enzyme CTI08_RS07190 PF02607 B12 binding domain CTI08_RS07190 PF02965 Vitamin B12 dependent methionine synthase, activation domain CTI08_RS07190 PF02310 B12 binding domain CTI08_RS07195 PF01384 Phosphate transporter family CTI08_RS07200 PF00291 Pyridoxal-phosphate dependent enzyme CTI08_RS07215 PF03781 Sulfatase-modifying factor enzyme 1 CTI08_RS07220 PF00884 Sulfatase CTI08_RS07230 PF01521 Iron-sulphur cluster biosynthesis CTI08_RS07230 PF01106 NifU-like domain CTI08_RS07235 PF07715 TonB-dependent Receptor Plug Domain CTI08_RS07235 PF00593 TonB dependent receptor CTI08_RS07245 PF00561 alpha/beta hydrolase fold CTI08_RS07250 PF00484 Carbonic anhydrase CTI08_RS07255 PF13472 GDSL-like Lipase/Acylhydrolase family CTI08_RS07260 PF00005 ABC transporter CTI08_RS07270 PF01694 Rhomboid family CTI08_RS07275 PF00912 Transglycosylase CTI08_RS07280 PF13089 Polyphosphate kinase N-terminal domain CTI08_RS07280 PF13090 Polyphosphate kinase C-terminal domain 2 CTI08_RS07280 PF17941 Polyphosphate kinase C-terminal domain 1 CTI08_RS07280 PF02503 Polyphosphate kinase middle domain CTI08_RS07295 PF03466 LysR substrate binding domain CTI08_RS07295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTI08_RS07300 PF00561 alpha/beta hydrolase fold CTI08_RS07305 PF07992 Pyridine nucleotide-disulphide oxidoreductase CTI08_RS07305 PF18113 Rubredoxin binding C-terminal domain CTI08_RS07310 PF00301 Rubredoxin CTI08_RS07325 PF00152 tRNA synthetases class II (D, K and N) CTI08_RS07325 PF01336 OB-fold nucleic acid binding domain CTI08_RS07330 PF14052 Capsule assembly protein Wzi CTI08_RS07340 PF01507 Phosphoadenosine phosphosulfate reductase family CTI08_RS07345 PF00009 Elongation factor Tu GTP binding domain CTI08_RS07360 PF03600 Citrate transporter CTI08_RS07370 PF01595 Cyclin M transmembrane N-terminal domain CTI08_RS07370 PF00571 CBS domain CTI08_RS07370 PF03471 Transporter associated domain CTI08_RS07375 PF03466 LysR substrate binding domain CTI08_RS07375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTI08_RS07380 PF00463 Isocitrate lyase family CTI08_RS07395 PF01774 UreD urease accessory protein CTI08_RS07400 PF00547 Urease, gamma subunit CTI08_RS07405 PF00699 Urease beta subunit CTI08_RS07410 PF00449 Urease alpha-subunit, N-terminal domain CTI08_RS07410 PF01979 Amidohydrolase family CTI08_RS07415 PF05194 UreE urease accessory protein, C-terminal domain CTI08_RS07415 PF02814 UreE urease accessory protein, N-terminal domain CTI08_RS07420 PF01730 UreF CTI08_RS07425 PF02492 CobW/HypB/UreG, nucleotide-binding domain CTI08_RS07440 PF00905 Penicillin binding protein transpeptidase domain CTI08_RS07440 PF03717 Penicillin-binding Protein dimerisation domain CTI08_RS07455 PF05191 Adenylate kinase, active site lid CTI08_RS07465 PF00730 HhH-GPD superfamily base excision DNA repair protein CTI08_RS07465 PF10576 Iron-sulfur binding domain of endonuclease III CTI08_RS07465 PF00633 Helix-hairpin-helix motif CTI08_RS07470 PF04060 Putative Fe-S cluster CTI08_RS07475 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CTI08_RS07475 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CTI08_RS07485 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CTI08_RS07490 PF02590 Predicted SPOUT methyltransferase CTI08_RS07495 PF05362 Lon protease (S16) C-terminal proteolytic domain CTI08_RS07495 PF00004 ATPase family associated with various cellular activities (AAA) CTI08_RS07495 PF02190 ATP-dependent protease La (LON) substrate-binding domain CTI08_RS07500 PF05658 Head domain of trimeric autotransporter adhesin CTI08_RS07500 PF13018 Extended Signal Peptide of Type V secretion system CTI08_RS07500 PF03895 YadA-like membrane anchor domain CTI08_RS07500 PF05662 Coiled stalk of trimeric autotransporter adhesin CTI08_RS07505 PF04355 SmpA / OmlA family CTI08_RS07505 PF00691 OmpA family CTI08_RS07510 PF01812 5-formyltetrahydrofolate cyclo-ligase family CTI08_RS07610 PF03796 DnaB-like helicase C terminal domain CTI08_RS07610 PF00772 DnaB-like helicase N terminal domain CTI08_RS07875 PF01555 DNA methylase CTI08_RS08080 PF01551 Peptidase family M23 CTI08_RS08080 PF01476 LysM domain CTI08_RS08080 PF08525 Opacity-associated protein A N-terminal motif CTI08_RS08125 PF13356 Arm DNA-binding domain CTI08_RS08125 PF00589 Phage integrase family CTI08_RS08135 PF00854 POT family CTI08_RS08140 PF00120 Glutamine synthetase, catalytic domain CTI08_RS08140 PF03951 Glutamine synthetase, beta-Grasp domain CTI08_RS08145 PF04345 Chorismate lyase CTI08_RS08150 PF01040 UbiA prenyltransferase family CTI08_RS08185 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CTI08_RS08185 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CTI08_RS08190 PF01784 NIF3 (NGG1p interacting factor 3) CTI08_RS08195 PF13180 PDZ domain CTI08_RS08200 PF12627 Probable RNA and SrmB- binding site of polymerase A CTI08_RS08200 PF01743 Poly A polymerase head domain CTI08_RS08205 PF00390 Malic enzyme, N-terminal domain CTI08_RS08205 PF01515 Phosphate acetyl/butaryl transferase CTI08_RS08205 PF03949 Malic enzyme, NAD binding domain CTI08_RS08210 PF03707 Bacterial signalling protein N terminal repeat CTI08_RS08210 PF00990 Diguanylate cyclase, GGDEF domain CTI08_RS08210 PF00563 EAL domain CTI08_RS08215 PF04452 RNA methyltransferase CTI08_RS08220 PF02219 Methylenetetrahydrofolate reductase CTI08_RS08225 PF05221 S-adenosyl-L-homocysteine hydrolase CTI08_RS08225 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CTI08_RS08240 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CTI08_RS08240 PF09317 Domain of unknown function (DUF1974) CTI08_RS08240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CTI08_RS08245 PF04055 Radical SAM superfamily CTI08_RS08250 PF07992 Pyridine nucleotide-disulphide oxidoreductase CTI08_RS08250 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CTI08_RS08260 PF07690 Major Facilitator Superfamily CTI08_RS08270 PF00557 Metallopeptidase family M24 CTI08_RS08275 PF00318 Ribosomal protein S2 CTI08_RS08280 PF00889 Elongation factor TS CTI08_RS08290 PF12833 Helix-turn-helix domain CTI08_RS08310 PF05036 Sporulation related domain CTI08_RS08310 PF03330 Lytic transglycolase CTI08_RS08315 PF13406 Transglycosylase SLT domain CTI08_RS08320 PF01098 Cell cycle protein CTI08_RS08330 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CTI08_RS08330 PF14489 QueF-like protein CTI08_RS08335 PF01061 ABC-2 type transporter CTI08_RS08340 PF00005 ABC transporter CTI08_RS08370 PF00464 Serine hydroxymethyltransferase CTI08_RS08375 PF02321 Outer membrane efflux protein CTI08_RS08380 PF00873 AcrB/AcrD/AcrF family CTI08_RS08385 PF13533 Biotin-lipoyl like CTI08_RS08390 PF03466 LysR substrate binding domain CTI08_RS08390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTI08_RS08395 PF00497 Bacterial extracellular solute-binding proteins, family 3 CTI08_RS08400 PF00528 Binding-protein-dependent transport system inner membrane component CTI08_RS08405 PF00528 Binding-protein-dependent transport system inner membrane component CTI08_RS08410 PF00005 ABC transporter CTI08_RS08415 PF00893 Small Multidrug Resistance protein CTI08_RS08420 PF00037 4Fe-4S binding domain CTI08_RS08425 PF16325 Peptidase family U32 C-terminal domain CTI08_RS08425 PF01136 Peptidase family U32 CTI08_RS08430 PF00155 Aminotransferase class I and II CTI08_RS08430 PF00392 Bacterial regulatory proteins, gntR family CTI08_RS08435 PF02567 Phenazine biosynthesis-like protein CTI08_RS08440 PF00970 Oxidoreductase FAD-binding domain CTI08_RS08440 PF00175 Oxidoreductase NAD-binding domain CTI08_RS08445 PF18389 TrmO C-terminal domain CTI08_RS08445 PF01980 tRNA-methyltransferase O CTI08_RS08455 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CTI08_RS08455 PF00437 Type II/IV secretion system protein CTI08_RS08465 PF00072 Response regulator receiver domain CTI08_RS08465 PF00486 Transcriptional regulatory protein, C terminal CTI08_RS08470 PF08521 Two-component sensor kinase N-terminal CTI08_RS08470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTI08_RS08470 PF00512 His Kinase A (phospho-acceptor) domain CTI08_RS08480 PF00293 NUDIX domain CTI08_RS08490 PF14814 Bifunctional transglycosylase second domain CTI08_RS08490 PF00912 Transglycosylase CTI08_RS08490 PF00905 Penicillin binding protein transpeptidase domain CTI08_RS08495 PF01513 ATP-NAD kinase CTI08_RS08500 PF07023 Protein of unknown function (DUF1315) CTI08_RS08505 PF02885 Glycosyl transferase family, helical bundle domain CTI08_RS08505 PF00591 Glycosyl transferase family, a/b domain CTI08_RS08515 PF00375 Sodium:dicarboxylate symporter family CTI08_RS08520 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CTI08_RS08520 PF02770 Acyl-CoA dehydrogenase, middle domain CTI08_RS08520 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CTI08_RS08525 PF00756 Putative esterase CTI08_RS08530 PF00800 Prephenate dehydratase CTI08_RS08530 PF01817 Chorismate mutase type II CTI08_RS08530 PF01842 ACT domain CTI08_RS08535 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CTI08_RS08545 PF01546 Peptidase family M20/M25/M40 CTI08_RS08545 PF07687 Peptidase dimerisation domain CTI08_RS08550 PF12706 Beta-lactamase superfamily domain CTI08_RS08560 PF03883 Peroxide stress protein YaaA CTI08_RS08570 PF05690 Thiazole biosynthesis protein ThiG CTI08_RS08580 PF04241 Protein of unknown function (DUF423) CTI08_RS08585 PF04545 Sigma-70, region 4 CTI08_RS08585 PF04542 Sigma-70 region 2 CTI08_RS08585 PF00140 Sigma-70 factor, region 1.2 CTI08_RS08595 PF00313 'Cold-shock' DNA-binding domain CTI08_RS08600 PF00270 DEAD/DEAH box helicase CTI08_RS08600 PF00271 Helicase conserved C-terminal domain CTI08_RS08610 PF00881 Nitroreductase family CTI08_RS08615 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CTI08_RS08615 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CTI08_RS08635 PF01180 Dihydroorotate dehydrogenase CTI08_RS08640 PF02674 Colicin V production protein CTI08_RS08645 PF00156 Phosphoribosyl transferase domain CTI08_RS08660 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CTI08_RS08660 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CTI08_RS08665 PF01435 Peptidase family M48 CTI08_RS08670 PF09424 Yqey-like protein CTI08_RS08675 PF01165 Ribosomal protein S21 CTI08_RS08680 PF00814 Glycoprotease family CTI08_RS08700 PF00069 Protein kinase domain CTI08_RS08725 PF03466 LysR substrate binding domain CTI08_RS08725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTI08_RS08730 PF00202 Aminotransferase class-III CTI08_RS08735 PF00171 Aldehyde dehydrogenase family CTI08_RS08740 PF00324 Amino acid permease CTI08_RS08780 PF04076 Bacterial OB fold (BOF) protein CTI08_RS08805 PF00561 alpha/beta hydrolase fold CTI08_RS08810 PF03616 Sodium/glutamate symporter CTI08_RS08820 PF07729 FCD domain CTI08_RS08820 PF00392 Bacterial regulatory proteins, gntR family CTI08_RS08870 PF08946 Osmosensory transporter coiled coil CTI08_RS08870 PF00083 Sugar (and other) transporter CTI08_RS08895 PF00155 Aminotransferase class I and II CTI08_RS08900 PF02080 TrkA-C domain CTI08_RS08900 PF06826 Predicted Permease Membrane Region CTI08_RS08910 PF04403 Paraquat-inducible protein A CTI08_RS08915 PF02470 MlaD protein CTI08_RS08925 PF01177 Asp/Glu/Hydantoin racemase CTI08_RS08930 PF00892 EamA-like transporter family CTI08_RS08935 PF07995 Glucose / Sorbosone dehydrogenase CTI08_RS08955 PF00375 Sodium:dicarboxylate symporter family CTI08_RS08965 PF00753 Metallo-beta-lactamase superfamily CTI08_RS08965 PF16123 Hydroxyacylglutathione hydrolase C-terminus CTI08_RS08970 PF00528 Binding-protein-dependent transport system inner membrane component CTI08_RS08975 PF09383 NIL domain CTI08_RS08975 PF00005 ABC transporter CTI08_RS08980 PF03180 NLPA lipoprotein CTI08_RS08985 PF02844 Phosphoribosylglycinamide synthetase, N domain CTI08_RS08985 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CTI08_RS08985 PF02843 Phosphoribosylglycinamide synthetase, C domain CTI08_RS08990 PF02142 MGS-like domain CTI08_RS08990 PF01808 AICARFT/IMPCHase bienzyme CTI08_RS08995 PF02954 Bacterial regulatory protein, Fis family CTI08_RS09015 PF13932 GidA associated domain CTI08_RS09015 PF01134 Glucose inhibited division protein A CTI08_RS09025 PF14403 Circularly permuted ATP-grasp type 2 CTI08_RS09035 PF08379 Bacterial transglutaminase-like N-terminal region CTI08_RS09035 PF01841 Transglutaminase-like superfamily CTI08_RS09045 PF01168 Alanine racemase, N-terminal domain CTI08_RS09045 PF00842 Alanine racemase, C-terminal domain CTI08_RS09050 PF00772 DnaB-like helicase N terminal domain CTI08_RS09050 PF03796 DnaB-like helicase C terminal domain CTI08_RS09055 PF03948 Ribosomal protein L9, C-terminal domain CTI08_RS09055 PF01281 Ribosomal protein L9, N-terminal domain CTI08_RS09060 PF01084 Ribosomal protein S18 CTI08_RS09065 PF01250 Ribosomal protein S6 CTI08_RS09070 PF01040 UbiA prenyltransferase family CTI08_RS09075 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CTI08_RS09080 PF00510 Cytochrome c oxidase subunit III CTI08_RS09085 PF00115 Cytochrome C and Quinol oxidase polypeptide I CTI08_RS09090 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CTI08_RS09090 PF06481 COX Aromatic Rich Motif CTI08_RS09100 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CTI08_RS09100 PF00391 PEP-utilising enzyme, mobile domain CTI08_RS09100 PF02896 PEP-utilising enzyme, TIM barrel domain CTI08_RS09105 PF03618 Kinase/pyrophosphorylase CTI08_RS09115 PF14883 Hypothetical glycosyl hydrolase family 13 CTI08_RS09115 PF01522 Polysaccharide deacetylase CTI08_RS09120 PF00535 Glycosyl transferase family 2 CTI08_RS09125 PF13994 PgaD-like protein CTI08_RS09135 PF00296 Luciferase-like monooxygenase CTI08_RS09155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTI08_RS09155 PF03466 LysR substrate binding domain CTI08_RS09165 PF03462 PCRF domain CTI08_RS09165 PF00472 RF-1 domain CTI08_RS09170 PF13847 Methyltransferase domain CTI08_RS09170 PF17827 PrmC N-terminal domain CTI08_RS09175 PF00528 Binding-protein-dependent transport system inner membrane component CTI08_RS09180 PF09084 NMT1/THI5 like CTI08_RS09185 PF12833 Helix-turn-helix domain CTI08_RS09190 PF00106 short chain dehydrogenase CTI08_RS09195 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CTI08_RS09195 PF02770 Acyl-CoA dehydrogenase, middle domain CTI08_RS09195 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CTI08_RS09200 PF13193 AMP-binding enzyme C-terminal domain CTI08_RS09200 PF00501 AMP-binding enzyme CTI08_RS09205 PF01613 Flavin reductase like domain CTI08_RS09210 PF00899 ThiF family CTI08_RS09215 PF03109 ABC1 family CTI08_RS09230 PF03814 Potassium-transporting ATPase A subunit CTI08_RS09240 PF02669 K+-transporting ATPase, c chain CTI08_RS09245 PF13493 Domain of unknown function (DUF4118) CTI08_RS09245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTI08_RS09245 PF00512 His Kinase A (phospho-acceptor) domain CTI08_RS09245 PF02702 Osmosensitive K+ channel His kinase sensor domain CTI08_RS09250 PF00072 Response regulator receiver domain CTI08_RS09250 PF00486 Transcriptional regulatory protein, C terminal CTI08_RS09255 PF00120 Glutamine synthetase, catalytic domain CTI08_RS09265 PF03232 Ubiquinone biosynthesis protein COQ7 CTI08_RS09270 PF07690 Major Facilitator Superfamily CTI08_RS09275 PF07244 Surface antigen variable number repeat CTI08_RS09275 PF17243 POTRA domain TamA domain 1 CTI08_RS09275 PF01103 Surface antigen CTI08_RS09295 PF11791 Aconitate B N-terminal domain CTI08_RS09295 PF06434 Aconitate hydratase 2 N-terminus CTI08_RS09295 PF00330 Aconitase family (aconitate hydratase) CTI08_RS09305 PF00027 Cyclic nucleotide-binding domain CTI08_RS09305 PF00520 Ion transport protein CTI08_RS09310 PF07690 Major Facilitator Superfamily CTI08_RS09325 PF03466 LysR substrate binding domain CTI08_RS09325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTI08_RS09330 PF04284 Protein of unknown function (DUF441) CTI08_RS09340 PF00849 RNA pseudouridylate synthase CTI08_RS09340 PF01479 S4 domain CTI08_RS09355 PF01479 S4 domain CTI08_RS09355 PF00849 RNA pseudouridylate synthase CTI08_RS09360 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CTI08_RS09365 PF08676 MutL C terminal dimerisation domain CTI08_RS09365 PF01119 DNA mismatch repair protein, C-terminal domain CTI08_RS09375 PF17209 Hfq protein CTI08_RS09385 PF00881 Nitroreductase family CTI08_RS09395 PF00149 Calcineurin-like phosphoesterase CTI08_RS09400 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CTI08_RS09405 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CTI08_RS09405 PF00749 tRNA synthetases class I (E and Q), catalytic domain CTI08_RS09410 PF00117 Glutamine amidotransferase class-I CTI08_RS09410 PF02540 NAD synthase CTI08_RS09410 PF00958 GMP synthase C terminal domain CTI08_RS09415 PF05985 Ethanolamine ammonia-lyase light chain (EutC) CTI08_RS09420 PF06751 Ethanolamine ammonia lyase large subunit (EutB) CTI08_RS09425 PF13520 Amino acid permease CTI08_RS09430 PF00171 Aldehyde dehydrogenase family CTI08_RS09445 PF00465 Iron-containing alcohol dehydrogenase CTI08_RS09450 PF14493 Helix-turn-helix domain CTI08_RS09450 PF05970 PIF1-like helicase CTI08_RS09460 PF06445 GyrI-like small molecule binding domain CTI08_RS09465 PF02110 Hydroxyethylthiazole kinase family CTI08_RS09480 PF11940 Domain of unknown function (DUF3458) Ig-like fold CTI08_RS09480 PF17432 Domain of unknown function (DUF3458_C) ARM repeats CTI08_RS09480 PF01433 Peptidase family M1 domain CTI08_RS09490 PF00106 short chain dehydrogenase CTI08_RS09500 PF01817 Chorismate mutase type II CTI08_RS09505 PF01037 Lrp/AsnC ligand binding domain CTI08_RS09520 PF00440 Bacterial regulatory proteins, tetR family CTI08_RS09525 PF00593 TonB dependent receptor CTI08_RS09525 PF07715 TonB-dependent Receptor Plug Domain CTI08_RS09530 PF00924 Mechanosensitive ion channel CTI08_RS09560 PF07715 TonB-dependent Receptor Plug Domain CTI08_RS09560 PF00593 TonB dependent receptor CTI08_RS09580 PF12848 ABC transporter CTI08_RS09580 PF00005 ABC transporter CTI08_RS09585 PF00582 Universal stress protein family CTI08_RS09605 PF00689 Cation transporting ATPase, C-terminus CTI08_RS09605 PF00690 Cation transporter/ATPase, N-terminus CTI08_RS09610 PF02308 MgtC family CTI08_RS09615 PF03594 Benzoate membrane transport protein CTI08_RS09620 PF01037 Lrp/AsnC ligand binding domain CTI08_RS09625 PF01810 LysE type translocator CTI08_RS09630 PF00923 Transaldolase/Fructose-6-phosphate aldolase CTI08_RS09635 PF03466 LysR substrate binding domain CTI08_RS09635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTI08_RS09645 PF02803 Thiolase, C-terminal domain CTI08_RS09645 PF00108 Thiolase, N-terminal domain CTI08_RS09655 PF01575 MaoC like domain CTI08_RS09660 PF00144 Beta-lactamase CTI08_RS09670 PF07690 Major Facilitator Superfamily CTI08_RS09675 PF12170 DNA polymerase III tau subunit V interacting with alpha CTI08_RS09675 PF12169 DNA polymerase III subunits gamma and tau domain III CTI08_RS09675 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CTI08_RS09685 PF03061 Thioesterase superfamily CTI08_RS09690 PF00465 Iron-containing alcohol dehydrogenase CTI08_RS09700 PF01451 Low molecular weight phosphotyrosine protein phosphatase CTI08_RS09705 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CTI08_RS09705 PF01565 FAD binding domain CTI08_RS09720 PF01645 Conserved region in glutamate synthase CTI08_RS09740 PF12832 MFS_1 like family CTI08_RS09750 PF00289 Biotin carboxylase, N-terminal domain CTI08_RS09750 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CTI08_RS09750 PF02785 Biotin carboxylase C-terminal domain CTI08_RS09755 PF00364 Biotin-requiring enzyme CTI08_RS09760 PF01220 Dehydroquinase class II CTI08_RS09765 PF13438 Domain of unknown function (DUF4113) CTI08_RS09765 PF00817 impB/mucB/samB family CTI08_RS09765 PF11799 impB/mucB/samB family C-terminal domain CTI08_RS09775 PF00005 ABC transporter CTI08_RS09780 PF00486 Transcriptional regulatory protein, C terminal CTI08_RS09780 PF00072 Response regulator receiver domain CTI08_RS09790 PF18267 Rubredoxin NAD+ reductase C-terminal domain CTI08_RS09790 PF13806 Rieske-like [2Fe-2S] domain CTI08_RS09790 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CTI08_RS09790 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CTI08_RS09790 PF07992 Pyridine nucleotide-disulphide oxidoreductase CTI08_RS09790 PF04324 BFD-like [2Fe-2S] binding domain CTI08_RS09795 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CTI08_RS09795 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CTI08_RS09795 PF07992 Pyridine nucleotide-disulphide oxidoreductase CTI08_RS09795 PF18267 Rubredoxin NAD+ reductase C-terminal domain CTI08_RS09795 PF04324 BFD-like [2Fe-2S] binding domain CTI08_RS09800 PF00384 Molybdopterin oxidoreductase CTI08_RS09800 PF01568 Molydopterin dinucleotide binding domain CTI08_RS09800 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CTI08_RS09800 PF04324 BFD-like [2Fe-2S] binding domain CTI08_RS09805 PF12804 MobA-like NTP transferase domain CTI08_RS09810 PF00384 Molybdopterin oxidoreductase CTI08_RS09810 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CTI08_RS09810 PF01568 Molydopterin dinucleotide binding domain CTI08_RS09815 PF04055 Radical SAM superfamily CTI08_RS09815 PF06463 Molybdenum Cofactor Synthesis C CTI08_RS09825 PF02391 MoaE protein CTI08_RS09830 PF00994 Probable molybdopterin binding domain CTI08_RS09830 PF01967 MoaC family CTI08_RS09835 PF03453 MoeA N-terminal region (domain I and II) CTI08_RS09835 PF03454 MoeA C-terminal region (domain IV) CTI08_RS09835 PF00994 Probable molybdopterin binding domain CTI08_RS09840 PF01638 HxlR-like helix-turn-helix CTI08_RS09845 PF00392 Bacterial regulatory proteins, gntR family CTI08_RS09845 PF00155 Aminotransferase class I and II CTI08_RS09850 PF00892 EamA-like transporter family CTI08_RS09870 PF02635 DsrE/DsrF-like family CTI08_RS09875 PF16363 GDP-mannose 4,6 dehydratase CTI08_RS09880 PF10415 Fumarase C C-terminus CTI08_RS09880 PF00206 Lyase CTI08_RS09905 PF01266 FAD dependent oxidoreductase CTI08_RS09915 PF02542 YgbB family CTI08_RS09925 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CTI08_RS09925 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CTI08_RS09930 PF00440 Bacterial regulatory proteins, tetR family CTI08_RS09935 PF00072 Response regulator receiver domain CTI08_RS09935 PF00158 Sigma-54 interaction domain CTI08_RS09935 PF02954 Bacterial regulatory protein, Fis family CTI08_RS09940 PF00989 PAS fold CTI08_RS09940 PF00512 His Kinase A (phospho-acceptor) domain CTI08_RS09940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTI08_RS09945 PF04055 Radical SAM superfamily CTI08_RS09945 PF00919 Uncharacterized protein family UPF0004 CTI08_RS09945 PF18693 TRAM domain CTI08_RS09950 PF00696 Amino acid kinase family CTI08_RS09955 PF01765 Ribosome recycling factor CTI08_RS09960 PF01255 Putative undecaprenyl diphosphate synthase CTI08_RS09970 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CTI08_RS09970 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CTI08_RS09970 PF13288 DXP reductoisomerase C-terminal domain CTI08_RS09975 PF13180 PDZ domain CTI08_RS09975 PF17820 PDZ domain CTI08_RS09975 PF02163 Peptidase family M50 CTI08_RS09980 PF01103 Surface antigen CTI08_RS09980 PF07244 Surface antigen variable number repeat CTI08_RS09990 PF00132 Bacterial transferase hexapeptide (six repeats) CTI08_RS09990 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CTI08_RS09995 PF07977 FabA-like domain CTI08_RS10000 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CTI08_RS10000 PF00132 Bacterial transferase hexapeptide (six repeats) CTI08_RS10015 PF02631 RecX family CTI08_RS10020 PF00154 recA bacterial DNA recombination protein CTI08_RS10025 PF01479 S4 domain CTI08_RS10030 PF13419 Haloacid dehalogenase-like hydrolase CTI08_RS10055 PF01037 Lrp/AsnC ligand binding domain CTI08_RS10060 PF00266 Aminotransferase class-V CTI08_RS10065 PF00324 Amino acid permease CTI08_RS10080 PF00082 Subtilase family CTI08_RS10080 PF05922 Peptidase inhibitor I9 CTI08_RS10085 PF01740 STAS domain CTI08_RS10085 PF00916 Sulfate permease family CTI08_RS10090 PF02586 SOS response associated peptidase (SRAP) CTI08_RS10095 PF07995 Glucose / Sorbosone dehydrogenase CTI08_RS10105 PF03707 Bacterial signalling protein N terminal repeat CTI08_RS10105 PF00563 EAL domain CTI08_RS10105 PF00990 Diguanylate cyclase, GGDEF domain CTI08_RS10125 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CTI08_RS10125 PF02378 Phosphotransferase system, EIIC CTI08_RS10130 PF00294 pfkB family carbohydrate kinase CTI08_RS10135 PF00381 PTS HPr component phosphorylation site CTI08_RS10135 PF02896 PEP-utilising enzyme, TIM barrel domain CTI08_RS10135 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CTI08_RS10135 PF00391 PEP-utilising enzyme, mobile domain CTI08_RS10135 PF05524 PEP-utilising enzyme, N-terminal CTI08_RS10160 PF05525 Branched-chain amino acid transport protein CTI08_RS10165 PF00557 Metallopeptidase family M24 CTI08_RS10170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTI08_RS10170 PF03466 LysR substrate binding domain CTI08_RS10180 PF00462 Glutaredoxin CTI08_RS10185 PF00202 Aminotransferase class-III CTI08_RS10190 PF00571 CBS domain CTI08_RS10190 PF00478 IMP dehydrogenase / GMP reductase domain CTI08_RS10215 PF00448 SRP54-type protein, GTPase domain CTI08_RS10215 PF02881 SRP54-type protein, helical bundle domain CTI08_RS10225 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) CTI08_RS10245 PF08173 Membrane bound YbgT-like protein CTI08_RS10250 PF02322 Cytochrome bd terminal oxidase subunit II CTI08_RS10255 PF01654 Cytochrome bd terminal oxidase subunit I CTI08_RS10265 PF07290 Protein of unknown function (DUF1449) CTI08_RS10275 PF00294 pfkB family carbohydrate kinase CTI08_RS10280 PF00593 TonB dependent receptor CTI08_RS10280 PF07715 TonB-dependent Receptor Plug Domain CTI08_RS10285 PF05193 Peptidase M16 inactive domain CTI08_RS10285 PF08367 Peptidase M16C associated CTI08_RS10285 PF00675 Insulinase (Peptidase family M16) CTI08_RS10290 PF02253 Phospholipase A1 CTI08_RS10295 PF02386 Cation transport protein CTI08_RS10300 PF02080 TrkA-C domain CTI08_RS10300 PF02254 TrkA-N domain CTI08_RS10305 PF00291 Pyridoxal-phosphate dependent enzyme CTI08_RS10305 PF00585 C-terminal regulatory domain of Threonine dehydratase CTI08_RS10310 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CTI08_RS10325 PF01118 Semialdehyde dehydrogenase, NAD binding domain CTI08_RS10325 PF02774 Semialdehyde dehydrogenase, dimerisation domain CTI08_RS10335 PF02617 ATP-dependent Clp protease adaptor protein ClpS CTI08_RS10340 PF17871 AAA lid domain CTI08_RS10340 PF00004 ATPase family associated with various cellular activities (AAA) CTI08_RS10340 PF10431 C-terminal, D2-small domain, of ClpB protein CTI08_RS10340 PF02861 Clp amino terminal domain, pathogenicity island component CTI08_RS10340 PF07724 AAA domain (Cdc48 subfamily) CTI08_RS10345 PF02694 Uncharacterised BCR, YnfA/UPF0060 family CTI08_RS10350 PF00793 DAHP synthetase I family CTI08_RS10365 PF07992 Pyridine nucleotide-disulphide oxidoreductase CTI08_RS10365 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CTI08_RS10395 PF00117 Glutamine amidotransferase class-I CTI08_RS10395 PF06418 CTP synthase N-terminus CTI08_RS10400 PF00793 DAHP synthetase I family CTI08_RS10405 PF03952 Enolase, N-terminal domain CTI08_RS10405 PF00113 Enolase, C-terminal TIM barrel domain CTI08_RS10410 PF04239 Protein of unknown function (DUF421) CTI08_RS10415 PF04977 Septum formation initiator CTI08_RS10420 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CTI08_RS10425 PF01144 Coenzyme A transferase CTI08_RS10430 PF01144 Coenzyme A transferase CTI08_RS10435 PF02803 Thiolase, C-terminal domain CTI08_RS10435 PF00108 Thiolase, N-terminal domain CTI08_RS10440 PF10397 Adenylosuccinate lyase C-terminus CTI08_RS10440 PF00206 Lyase CTI08_RS10445 PF00561 alpha/beta hydrolase fold CTI08_RS10450 PF07690 Major Facilitator Superfamily CTI08_RS10455 PF02627 Carboxymuconolactone decarboxylase family CTI08_RS10460 PF00775 Dioxygenase CTI08_RS10460 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal CTI08_RS10465 PF00775 Dioxygenase CTI08_RS10470 PF01487 Type I 3-dehydroquinase CTI08_RS10475 PF05048 Periplasmic copper-binding protein (NosD) CTI08_RS10480 PF04966 Carbohydrate-selective porin, OprB family CTI08_RS10485 PF13360 PQQ-like domain CTI08_RS10485 PF01011 PQQ enzyme repeat CTI08_RS10495 PF04143 Sulphur transport CTI08_RS10505 PF00753 Metallo-beta-lactamase superfamily CTI08_RS10510 PF01614 Bacterial transcriptional regulator CTI08_RS10510 PF09339 IclR helix-turn-helix domain CTI08_RS10515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTI08_RS10515 PF03466 LysR substrate binding domain CTI08_RS10520 PF02770 Acyl-CoA dehydrogenase, middle domain CTI08_RS10520 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CTI08_RS10520 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CTI08_RS10535 PF00106 short chain dehydrogenase CTI08_RS10545 PF07690 Major Facilitator Superfamily CTI08_RS10555 PF01425 Amidase CTI08_RS10560 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CTI08_RS10575 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CTI08_RS10575 PF00355 Rieske [2Fe-2S] domain CTI08_RS10590 PF00111 2Fe-2S iron-sulfur cluster binding domain CTI08_RS10590 PF00175 Oxidoreductase NAD-binding domain CTI08_RS10595 PF01613 Flavin reductase like domain CTI08_RS10600 PF12833 Helix-turn-helix domain CTI08_RS10600 PF02311 AraC-like ligand binding domain CTI08_RS10605 PF02727 Copper amine oxidase, N2 domain CTI08_RS10605 PF07833 Copper amine oxidase N-terminal domain CTI08_RS10605 PF02728 Copper amine oxidase, N3 domain CTI08_RS10605 PF01179 Copper amine oxidase, enzyme domain CTI08_RS10615 PF00171 Aldehyde dehydrogenase family CTI08_RS10620 PF01804 Penicillin amidase CTI08_RS10625 PF12146 Serine aminopeptidase, S33 CTI08_RS10630 PF00108 Thiolase, N-terminal domain CTI08_RS10630 PF02803 Thiolase, C-terminal domain CTI08_RS10635 PF01144 Coenzyme A transferase CTI08_RS10645 PF00775 Dioxygenase CTI08_RS10645 PF04444 Catechol dioxygenase N terminus CTI08_RS10650 PF02426 Muconolactone delta-isomerase CTI08_RS10660 PF03466 LysR substrate binding domain CTI08_RS10660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTI08_RS10670 PF00392 Bacterial regulatory proteins, gntR family CTI08_RS10670 PF07729 FCD domain CTI08_RS10675 PF00920 Dehydratase family CTI08_RS10680 PF07690 Major Facilitator Superfamily CTI08_RS10690 PF00171 Aldehyde dehydrogenase family CTI08_RS10710 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CTI08_RS10710 PF02770 Acyl-CoA dehydrogenase, middle domain CTI08_RS10710 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CTI08_RS10720 PF00158 Sigma-54 interaction domain CTI08_RS10720 PF02954 Bacterial regulatory protein, Fis family CTI08_RS10720 PF06506 Propionate catabolism activator CTI08_RS10725 PF00501 AMP-binding enzyme CTI08_RS10725 PF13193 AMP-binding enzyme C-terminal domain CTI08_RS10730 PF04341 Protein of unknown function, DUF485 CTI08_RS10735 PF00474 Sodium:solute symporter family CTI08_RS10740 PF08240 Alcohol dehydrogenase GroES-like domain CTI08_RS10740 PF00107 Zinc-binding dehydrogenase CTI08_RS10745 PF00171 Aldehyde dehydrogenase family CTI08_RS10755 PF00561 alpha/beta hydrolase fold CTI08_RS10760 PF00199 Catalase CTI08_RS10760 PF06628 Catalase-related immune-responsive CTI08_RS10780 PF07859 alpha/beta hydrolase fold CTI08_RS10785 PF01047 MarR family CTI08_RS10790 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CTI08_RS10790 PF07992 Pyridine nucleotide-disulphide oxidoreductase CTI08_RS10795 PF00106 short chain dehydrogenase CTI08_RS10800 PF01872 RibD C-terminal domain CTI08_RS10805 PF00376 MerR family regulatory protein CTI08_RS10805 PF09278 MerR, DNA binding CTI08_RS10815 PF07992 Pyridine nucleotide-disulphide oxidoreductase CTI08_RS10825 PF12706 Beta-lactamase superfamily domain CTI08_RS10830 PF08359 YsiA-like protein, C-terminal region CTI08_RS10830 PF00440 Bacterial regulatory proteins, tetR family CTI08_RS10840 PF00857 Isochorismatase family CTI08_RS10845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTI08_RS10845 PF03466 LysR substrate binding domain CTI08_RS10850 PF07995 Glucose / Sorbosone dehydrogenase CTI08_RS10855 PF02254 TrkA-N domain CTI08_RS10855 PF00999 Sodium/hydrogen exchanger family CTI08_RS10865 PF07687 Peptidase dimerisation domain CTI08_RS10865 PF01546 Peptidase family M20/M25/M40 CTI08_RS10880 PF08479 POTRA domain, ShlB-type CTI08_RS10880 PF17287 POTRA domain CTI08_RS10880 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CTI08_RS10885 PF04829 Pre-toxin domain with VENN motif CTI08_RS10885 PF13018 Extended Signal Peptide of Type V secretion system CTI08_RS10885 PF05860 haemagglutination activity domain CTI08_RS10885 PF13332 Hemagglutinin repeat CTI08_RS10900 PF07690 Major Facilitator Superfamily CTI08_RS10905 PF04909 Amidohydrolase CTI08_RS10915 PF07702 UTRA domain CTI08_RS10915 PF00392 Bacterial regulatory proteins, gntR family CTI08_RS10920 PF08450 SMP-30/Gluconolactonase/LRE-like region CTI08_RS10930 PF03466 LysR substrate binding domain CTI08_RS10930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTI08_RS10950 PF07690 Major Facilitator Superfamily CTI08_RS10955 PF01842 ACT domain CTI08_RS10955 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CTI08_RS10955 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CTI08_RS10960 PF03737 Aldolase/RraA CTI08_RS10980 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CTI08_RS10980 PF00529 HlyD membrane-fusion protein of T1SS CTI08_RS10995 PF00171 Aldehyde dehydrogenase family CTI08_RS11000 PF00920 Dehydratase family CTI08_RS11010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTI08_RS11010 PF03466 LysR substrate binding domain CTI08_RS11015 PF01370 NAD dependent epimerase/dehydratase family CTI08_RS11020 PF07690 Major Facilitator Superfamily CTI08_RS11025 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CTI08_RS11025 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CTI08_RS11030 PF12833 Helix-turn-helix domain CTI08_RS11030 PF06719 AraC-type transcriptional regulator N-terminus CTI08_RS11045 PF08240 Alcohol dehydrogenase GroES-like domain CTI08_RS11045 PF00107 Zinc-binding dehydrogenase CTI08_RS11055 PF01032 FecCD transport family CTI08_RS11060 PF00005 ABC transporter CTI08_RS11080 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CTI08_RS11080 PF14572 Phosphoribosyl synthetase-associated domain CTI08_RS11085 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CTI08_RS11165 PF00196 Bacterial regulatory proteins, luxR family CTI08_RS11170 PF01425 Amidase CTI08_RS11175 PF13533 Biotin-lipoyl like CTI08_RS11180 PF07690 Major Facilitator Superfamily CTI08_RS11205 PF01975 Survival protein SurE CTI08_RS11215 PF04607 Region found in RelA / SpoT proteins CTI08_RS11215 PF13291 ACT domain CTI08_RS11215 PF02824 TGS domain CTI08_RS11265 PF12146 Serine aminopeptidase, S33 CTI08_RS11295 PF00512 His Kinase A (phospho-acceptor) domain CTI08_RS11295 PF16527 Two-component sensor protein CpxA, periplasmic domain CTI08_RS11295 PF00672 HAMP domain CTI08_RS11295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTI08_RS11300 PF00072 Response regulator receiver domain CTI08_RS11300 PF00486 Transcriptional regulatory protein, C terminal CTI08_RS11305 PF00529 HlyD membrane-fusion protein of T1SS CTI08_RS11305 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CTI08_RS11310 PF00873 AcrB/AcrD/AcrF family CTI08_RS11315 PF02321 Outer membrane efflux protein CTI08_RS11320 PF12146 Serine aminopeptidase, S33 CTI08_RS11325 PF00743 Flavin-binding monooxygenase-like CTI08_RS11330 PF01593 Flavin containing amine oxidoreductase CTI08_RS11345 PF01266 FAD dependent oxidoreductase CTI08_RS11370 PF02753 Pili assembly chaperone PapD, C-terminal domain CTI08_RS11370 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CTI08_RS11375 PF00577 Outer membrane usher protein CTI08_RS11375 PF13954 PapC N-terminal domain CTI08_RS11375 PF13953 PapC C-terminal domain CTI08_RS11380 PF00419 Fimbrial protein CTI08_RS11390 PF00107 Zinc-binding dehydrogenase CTI08_RS11390 PF08240 Alcohol dehydrogenase GroES-like domain CTI08_RS11400 PF00199 Catalase CTI08_RS11415 PF13091 PLD-like domain CTI08_RS11435 PF01244 Membrane dipeptidase (Peptidase family M19) CTI08_RS11440 PF13186 Iron-sulfur cluster-binding domain CTI08_RS11440 PF04055 Radical SAM superfamily CTI08_RS11445 PF05402 Coenzyme PQQ synthesis protein D (PqqD) CTI08_RS11450 PF03070 TENA/THI-4/PQQC family CTI08_RS11455 PF12706 Beta-lactamase superfamily domain CTI08_RS11460 PF08042 PqqA family CTI08_RS11465 PF02503 Polyphosphate kinase middle domain CTI08_RS11465 PF13090 Polyphosphate kinase C-terminal domain 2 CTI08_RS11465 PF13089 Polyphosphate kinase N-terminal domain CTI08_RS11465 PF17941 Polyphosphate kinase C-terminal domain 1 CTI08_RS11470 PF00149 Calcineurin-like phosphoesterase CTI08_RS11480 PF00857 Isochorismatase family CTI08_RS11480 PF00550 Phosphopantetheine attachment site CTI08_RS11485 PF00106 short chain dehydrogenase CTI08_RS11490 PF00005 ABC transporter CTI08_RS11490 PF03459 TOBE domain CTI08_RS11495 PF00528 Binding-protein-dependent transport system inner membrane component CTI08_RS11505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTI08_RS11505 PF03459 TOBE domain CTI08_RS11510 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CTI08_RS11510 PF00355 Rieske [2Fe-2S] domain CTI08_RS11515 PF00866 Ring hydroxylating beta subunit CTI08_RS11520 PF00970 Oxidoreductase FAD-binding domain CTI08_RS11520 PF00111 2Fe-2S iron-sulfur cluster binding domain CTI08_RS11520 PF00175 Oxidoreductase NAD-binding domain CTI08_RS11525 PF12833 Helix-turn-helix domain CTI08_RS11525 PF14525 AraC-binding-like domain CTI08_RS11535 PF01613 Flavin reductase like domain CTI08_RS11550 PF01738 Dienelactone hydrolase family CTI08_RS11555 PF07690 Major Facilitator Superfamily CTI08_RS11560 PF12833 Helix-turn-helix domain CTI08_RS11560 PF06719 AraC-type transcriptional regulator N-terminus CTI08_RS11580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTI08_RS11580 PF03466 LysR substrate binding domain CTI08_RS11585 PF01144 Coenzyme A transferase CTI08_RS11590 PF01144 Coenzyme A transferase CTI08_RS11595 PF02667 Short chain fatty acid transporter CTI08_RS11600 PF00108 Thiolase, N-terminal domain CTI08_RS11600 PF02803 Thiolase, C-terminal domain CTI08_RS11605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTI08_RS11605 PF03466 LysR substrate binding domain CTI08_RS11610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTI08_RS11610 PF03466 LysR substrate binding domain CTI08_RS11625 PF10415 Fumarase C C-terminus CTI08_RS11625 PF00206 Lyase CTI08_RS11630 PF00593 TonB dependent receptor CTI08_RS11630 PF07715 TonB-dependent Receptor Plug Domain CTI08_RS11635 PF00083 Sugar (and other) transporter CTI08_RS11650 PF00005 ABC transporter CTI08_RS11655 PF00528 Binding-protein-dependent transport system inner membrane component CTI08_RS11660 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CTI08_RS11675 PF00392 Bacterial regulatory proteins, gntR family CTI08_RS11675 PF07702 UTRA domain CTI08_RS11685 PF02525 Flavodoxin-like fold CTI08_RS11690 PF01638 HxlR-like helix-turn-helix CTI08_RS11695 PF06445 GyrI-like small molecule binding domain CTI08_RS11695 PF12833 Helix-turn-helix domain CTI08_RS11710 PF01925 Sulfite exporter TauE/SafE CTI08_RS11715 PF00753 Metallo-beta-lactamase superfamily CTI08_RS11715 PF04273 Putative phosphatase (DUF442) CTI08_RS11720 PF04273 Putative phosphatase (DUF442) CTI08_RS11720 PF00753 Metallo-beta-lactamase superfamily CTI08_RS11725 PF02954 Bacterial regulatory protein, Fis family CTI08_RS11725 PF00072 Response regulator receiver domain CTI08_RS11725 PF00158 Sigma-54 interaction domain CTI08_RS11730 PF01062 Bestrophin, RFP-TM, chloride channel CTI08_RS11735 PF08240 Alcohol dehydrogenase GroES-like domain CTI08_RS11735 PF00107 Zinc-binding dehydrogenase CTI08_RS11740 PF00106 short chain dehydrogenase CTI08_RS11745 PF07992 Pyridine nucleotide-disulphide oxidoreductase CTI08_RS11745 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CTI08_RS11750 PF00364 Biotin-requiring enzyme CTI08_RS11750 PF02817 e3 binding domain CTI08_RS11750 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CTI08_RS11755 PF02779 Transketolase, pyrimidine binding domain CTI08_RS11755 PF02780 Transketolase, C-terminal domain CTI08_RS11760 PF00676 Dehydrogenase E1 component CTI08_RS11765 PF04055 Radical SAM superfamily CTI08_RS11780 PF08448 PAS fold CTI08_RS11780 PF00990 Diguanylate cyclase, GGDEF domain CTI08_RS11785 PF01264 Chorismate synthase CTI08_RS11790 PF05175 Methyltransferase small domain CTI08_RS11795 PF00291 Pyridoxal-phosphate dependent enzyme CTI08_RS11805 PF01434 Peptidase family M41 CTI08_RS11805 PF17862 AAA+ lid domain CTI08_RS11805 PF00004 ATPase family associated with various cellular activities (AAA) CTI08_RS11815 PF05166 YcgL domain CTI08_RS11835 PF00570 HRDC domain CTI08_RS11835 PF01612 3'-5' exonuclease CTI08_RS11840 PF02132 RecR protein CTI08_RS11840 PF13662 Toprim domain CTI08_RS11845 PF02575 YbaB/EbfC DNA-binding family CTI08_RS11855 PF01053 Cys/Met metabolism PLP-dependent enzyme CTI08_RS11860 PF00561 alpha/beta hydrolase fold CTI08_RS11865 PF08241 Methyltransferase domain CTI08_RS11895 PF01230 HIT domain CTI08_RS11930 PF00005 ABC transporter CTI08_RS11935 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CTI08_RS11945 PF02684 Lipid-A-disaccharide synthetase CTI08_RS11950 PF07715 TonB-dependent Receptor Plug Domain CTI08_RS11950 PF00593 TonB dependent receptor CTI08_RS11970 PF01925 Sulfite exporter TauE/SafE CTI08_RS11975 PF00793 DAHP synthetase I family CTI08_RS11980 PF02654 Cobalamin-5-phosphate synthase CTI08_RS11995 PF02277 Phosphoribosyltransferase CTI08_RS12000 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CTI08_RS12040 PF00593 TonB dependent receptor CTI08_RS12040 PF07715 TonB-dependent Receptor Plug Domain CTI08_RS12065 PF06276 Ferric iron reductase FhuF-like transporter CTI08_RS12065 PF04183 IucA / IucC family CTI08_RS12070 PF06276 Ferric iron reductase FhuF-like transporter CTI08_RS12070 PF04183 IucA / IucC family CTI08_RS12075 PF07690 Major Facilitator Superfamily CTI08_RS12080 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) CTI08_RS12100 PF04073 Aminoacyl-tRNA editing domain CTI08_RS12110 PF03109 ABC1 family CTI08_RS12115 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CTI08_RS12115 PF02770 Acyl-CoA dehydrogenase, middle domain CTI08_RS12115 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CTI08_RS12120 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CTI08_RS12120 PF02770 Acyl-CoA dehydrogenase, middle domain CTI08_RS12120 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CTI08_RS12125 PF00487 Fatty acid desaturase CTI08_RS12130 PF12833 Helix-turn-helix domain CTI08_RS12130 PF12852 Cupin CTI08_RS12135 PF00639 PPIC-type PPIASE domain CTI08_RS12135 PF09312 SurA N-terminal domain CTI08_RS12140 PF00216 Bacterial DNA-binding protein CTI08_RS12155 PF02082 Transcriptional regulator CTI08_RS12160 PF00266 Aminotransferase class-V CTI08_RS12165 PF01592 NifU-like N terminal domain CTI08_RS12170 PF01521 Iron-sulphur cluster biosynthesis CTI08_RS12175 PF00226 DnaJ domain CTI08_RS12175 PF07743 HSCB C-terminal oligomerisation domain CTI08_RS12180 PF00012 Hsp70 protein CTI08_RS12185 PF00111 2Fe-2S iron-sulfur cluster binding domain CTI08_RS12190 PF00211 Adenylate and Guanylate cyclase catalytic domain CTI08_RS12200 PF17757 UvrB interaction domain CTI08_RS12200 PF03461 TRCF domain CTI08_RS12200 PF00271 Helicase conserved C-terminal domain CTI08_RS12200 PF00270 DEAD/DEAH box helicase CTI08_RS12200 PF02559 CarD-like/TRCF domain CTI08_RS12220 PF03737 Aldolase/RraA CTI08_RS12225 PF13460 NAD(P)H-binding CTI08_RS12230 PF01649 Ribosomal protein S20 CTI08_RS12240 PF00459 Inositol monophosphatase family CTI08_RS12255 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CTI08_RS12255 PF00005 ABC transporter CTI08_RS12260 PF00528 Binding-protein-dependent transport system inner membrane component CTI08_RS12265 PF00528 Binding-protein-dependent transport system inner membrane component CTI08_RS12270 PF01432 Peptidase family M3 CTI08_RS12285 PF00593 TonB dependent receptor CTI08_RS12285 PF07715 TonB-dependent Receptor Plug Domain CTI08_RS12295 PF01618 MotA/TolQ/ExbB proton channel family CTI08_RS12300 PF02472 Biopolymer transport protein ExbD/TolR CTI08_RS12310 PF02472 Biopolymer transport protein ExbD/TolR CTI08_RS12315 PF02472 Biopolymer transport protein ExbD/TolR CTI08_RS12325 PF01274 Malate synthase CTI08_RS12440 PF04860 Phage portal protein CTI08_RS12525 PF00772 DnaB-like helicase N terminal domain CTI08_RS12525 PF03796 DnaB-like helicase C terminal domain CTI08_RS12580 PF00589 Phage integrase family CTI08_RS12580 PF02899 Phage integrase, N-terminal SAM-like domain CTI08_RS12585 PF03969 AFG1-like ATPase CTI08_RS12595 PF00743 Flavin-binding monooxygenase-like CTI08_RS12605 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CTI08_RS12615 PF00216 Bacterial DNA-binding protein CTI08_RS12620 PF00575 S1 RNA binding domain CTI08_RS12625 PF02224 Cytidylate kinase CTI08_RS12635 PF14437 MafB19-like deaminase CTI08_RS12645 PF03167 Uracil DNA glycosylase superfamily CTI08_RS12655 PF03934 Type II secretion system (T2SS), protein K CTI08_RS12660 PF07963 Prokaryotic N-terminal methylation motif CTI08_RS12660 PF11612 Type II secretion system (T2SS), protein J CTI08_RS12665 PF02501 Type II secretion system (T2SS), protein I CTI08_RS12665 PF07963 Prokaryotic N-terminal methylation motif CTI08_RS12680 PF01026 TatD related DNase CTI08_RS12690 PF09115 DNA polymerase III, delta subunit, C terminal CTI08_RS12695 PF02348 Cytidylyltransferase CTI08_RS12700 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CTI08_RS12705 PF00005 ABC transporter CTI08_RS12705 PF00664 ABC transporter transmembrane region CTI08_RS12715 PF01618 MotA/TolQ/ExbB proton channel family CTI08_RS12720 PF02195 ParB-like nuclease domain CTI08_RS12720 PF17762 HTH domain found in ParB protein CTI08_RS12725 PF13614 AAA domain CTI08_RS12730 PF02527 rRNA small subunit methyltransferase G CTI08_RS12735 PF00483 Nucleotidyl transferase CTI08_RS12740 PF01636 Phosphotransferase enzyme family CTI08_RS12745 PF04453 LPS transport system D CTI08_RS12745 PF03968 OstA-like protein CTI08_RS12750 PF00639 PPIC-type PPIASE domain CTI08_RS12750 PF09312 SurA N-terminal domain CTI08_RS12755 PF01116 Fructose-bisphosphate aldolase class-II CTI08_RS12765 PF00162 Phosphoglycerate kinase CTI08_RS12775 PF02545 Maf-like protein CTI08_RS12780 PF08007 Cupin superfamily protein CTI08_RS12795 PF00375 Sodium:dicarboxylate symporter family CTI08_RS12800 PF06912 Protein of unknown function (DUF1275) CTI08_RS12805 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) CTI08_RS12810 PF00005 ABC transporter CTI08_RS12810 PF00664 ABC transporter transmembrane region CTI08_RS12820 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CTI08_RS12820 PF12833 Helix-turn-helix domain CTI08_RS12825 PF01597 Glycine cleavage H-protein CTI08_RS12830 PF02146 Sir2 family CTI08_RS12835 PF00474 Sodium:solute symporter family CTI08_RS12840 PF01037 Lrp/AsnC ligand binding domain CTI08_RS12845 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CTI08_RS12845 PF01619 Proline dehydrogenase CTI08_RS12845 PF14850 DNA-binding domain of Proline dehydrogenase CTI08_RS12845 PF00171 Aldehyde dehydrogenase family CTI08_RS12850 PF04229 GrpB protein CTI08_RS12855 PF05958 tRNA (Uracil-5-)-methyltransferase CTI08_RS12865 PF09992 Phosphodiester glycosidase CTI08_RS12875 PF04264 YceI-like domain CTI08_RS12885 PF00456 Transketolase, thiamine diphosphate binding domain CTI08_RS12885 PF02780 Transketolase, C-terminal domain CTI08_RS12885 PF02779 Transketolase, pyrimidine binding domain CTI08_RS12890 PF02773 S-adenosylmethionine synthetase, C-terminal domain CTI08_RS12890 PF02772 S-adenosylmethionine synthetase, central domain CTI08_RS12890 PF00438 S-adenosylmethionine synthetase, N-terminal domain CTI08_RS12910 PF00905 Penicillin binding protein transpeptidase domain CTI08_RS12925 PF02075 Crossover junction endodeoxyribonuclease RuvC CTI08_RS12930 PF01256 Carbohydrate kinase CTI08_RS12930 PF03853 YjeF-related protein N-terminus CTI08_RS12935 PF08331 Domain of unknown function (DUF1730) CTI08_RS12940 PF06968 Biotin and Thiamin Synthesis associated domain CTI08_RS12940 PF04055 Radical SAM superfamily CTI08_RS12955 PF16970 Type-1 fimbrial protein, A CTI08_RS12960 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CTI08_RS12960 PF02753 Pili assembly chaperone PapD, C-terminal domain CTI08_RS12965 PF00577 Outer membrane usher protein CTI08_RS12965 PF13954 PapC N-terminal domain CTI08_RS12965 PF13953 PapC C-terminal domain CTI08_RS12990 PF00892 EamA-like transporter family CTI08_RS13000 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CTI08_RS13010 PF03466 LysR substrate binding domain CTI08_RS13010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTI08_RS13030 PF00440 Bacterial regulatory proteins, tetR family CTI08_RS13040 PF01709 Transcriptional regulator CTI08_RS13045 PF01037 Lrp/AsnC ligand binding domain CTI08_RS13055 PF00005 ABC transporter CTI08_RS13060 PF00528 Binding-protein-dependent transport system inner membrane component CTI08_RS13065 PF00528 Binding-protein-dependent transport system inner membrane component CTI08_RS13080 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CTI08_RS13080 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CTI08_RS13090 PF00296 Luciferase-like monooxygenase CTI08_RS13095 PF03180 NLPA lipoprotein CTI08_RS13100 PF03180 NLPA lipoprotein CTI08_RS13105 PF00005 ABC transporter CTI08_RS13105 PF09383 NIL domain CTI08_RS13110 PF00528 Binding-protein-dependent transport system inner membrane component CTI08_RS13115 PF01926 50S ribosome-binding GTPase CTI08_RS13115 PF06071 Protein of unknown function (DUF933) CTI08_RS13140 PF03591 AzlC protein CTI08_RS13145 PF05437 Branched-chain amino acid transport protein (AzlD) CTI08_RS13155 PF02222 ATP-grasp domain CTI08_RS13160 PF01909 Nucleotidyltransferase domain CTI08_RS13160 PF08335 GlnD PII-uridylyltransferase CTI08_RS13160 PF01966 HD domain CTI08_RS13165 PF00155 Aminotransferase class I and II CTI08_RS13175 PF12833 Helix-turn-helix domain CTI08_RS13175 PF12852 Cupin CTI08_RS13180 PF00255 Glutathione peroxidase CTI08_RS13185 PF01641 SelR domain CTI08_RS13190 PF00155 Aminotransferase class I and II CTI08_RS13195 PF00375 Sodium:dicarboxylate symporter family CTI08_RS13200 PF00710 Asparaginase, N-terminal CTI08_RS13200 PF17763 Glutaminase/Asparaginase C-terminal domain CTI08_RS13205 PF02811 PHP domain CTI08_RS13205 PF07733 Bacterial DNA polymerase III alpha NTPase domain CTI08_RS13205 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CTI08_RS13205 PF14579 Helix-hairpin-helix motif CTI08_RS13205 PF01336 OB-fold nucleic acid binding domain CTI08_RS13210 PF00588 SpoU rRNA Methylase family CTI08_RS13215 PF00132 Bacterial transferase hexapeptide (six repeats) CTI08_RS13230 PF07992 Pyridine nucleotide-disulphide oxidoreductase CTI08_RS13230 PF13192 Thioredoxin domain CTI08_RS13245 PF03466 LysR substrate binding domain CTI08_RS13245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTI08_RS13250 PF01758 Sodium Bile acid symporter family CTI08_RS13255 PF01022 Bacterial regulatory protein, arsR family CTI08_RS13260 PF03960 ArsC family CTI08_RS13270 PF01979 Amidohydrolase family CTI08_RS13270 PF13382 Adenine deaminase C-terminal domain CTI08_RS13280 PF03466 LysR substrate binding domain CTI08_RS13280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTI08_RS13290 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CTI08_RS13295 PF01177 Asp/Glu/Hydantoin racemase CTI08_RS13300 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CTI08_RS13305 PF00528 Binding-protein-dependent transport system inner membrane component CTI08_RS13310 PF00005 ABC transporter CTI08_RS13315 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CTI08_RS13335 PF00296 Luciferase-like monooxygenase CTI08_RS13340 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CTI08_RS13340 PF02770 Acyl-CoA dehydrogenase, middle domain CTI08_RS13340 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CTI08_RS13355 PF01654 Cytochrome bd terminal oxidase subunit I CTI08_RS13360 PF02322 Cytochrome bd terminal oxidase subunit II CTI08_RS13370 PF00392 Bacterial regulatory proteins, gntR family CTI08_RS13370 PF00155 Aminotransferase class I and II CTI08_RS13375 PF03466 LysR substrate binding domain CTI08_RS13375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTI08_RS13390 PF00698 Acyl transferase domain CTI08_RS13395 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG CTI08_RS13405 PF01039 Carboxyl transferase domain CTI08_RS13410 PF06857 Malonate decarboxylase delta subunit (MdcD) CTI08_RS13415 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase CTI08_RS13420 PF16957 Malonate decarboxylase, alpha subunit, transporter CTI08_RS13425 PF07690 Major Facilitator Superfamily CTI08_RS13440 PF00392 Bacterial regulatory proteins, gntR family CTI08_RS13440 PF00155 Aminotransferase class I and II CTI08_RS13445 PF04172 LrgB-like family CTI08_RS13450 PF03788 LrgA family CTI08_RS13455 PF03466 LysR substrate binding domain CTI08_RS13455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTI08_RS13460 PF14834 Glutathione S-transferase, C-terminal domain CTI08_RS13460 PF02798 Glutathione S-transferase, N-terminal domain CTI08_RS13465 PF02798 Glutathione S-transferase, N-terminal domain CTI08_RS13470 PF03466 LysR substrate binding domain CTI08_RS13470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTI08_RS13480 PF00581 Rhodanese-like domain CTI08_RS13485 PF00132 Bacterial transferase hexapeptide (six repeats) CTI08_RS13495 PF00266 Aminotransferase class-V CTI08_RS13505 PF01810 LysE type translocator CTI08_RS13510 PF03466 LysR substrate binding domain CTI08_RS13510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTI08_RS13520 PF00497 Bacterial extracellular solute-binding proteins, family 3 CTI08_RS13525 PF00497 Bacterial extracellular solute-binding proteins, family 3 CTI08_RS13530 PF00005 ABC transporter CTI08_RS13535 PF00528 Binding-protein-dependent transport system inner membrane component CTI08_RS13540 PF00528 Binding-protein-dependent transport system inner membrane component CTI08_RS13555 PF00072 Response regulator receiver domain CTI08_RS13560 PF00072 Response regulator receiver domain CTI08_RS13560 PF09308 LuxQ, periplasmic CTI08_RS13560 PF00512 His Kinase A (phospho-acceptor) domain CTI08_RS13560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTI08_RS13570 PF01037 Lrp/AsnC ligand binding domain CTI08_RS13570 PF13404 AsnC-type helix-turn-helix domain CTI08_RS13580 PF00717 Peptidase S24-like CTI08_RS13605 PF18011 C-terminal domain found in long catalases CTI08_RS13605 PF00199 Catalase CTI08_RS13605 PF06628 Catalase-related immune-responsive CTI08_RS13615 PF00994 Probable molybdopterin binding domain CTI08_RS13615 PF18146 Damage-inducible protein CinA KH domain CTI08_RS13615 PF02464 Competence-damaged protein CTI08_RS13645 PF03466 LysR substrate binding domain CTI08_RS13645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTI08_RS13665 PF00501 AMP-binding enzyme CTI08_RS13665 PF13193 AMP-binding enzyme C-terminal domain CTI08_RS13670 PF00440 Bacterial regulatory proteins, tetR family CTI08_RS13675 PF02770 Acyl-CoA dehydrogenase, middle domain CTI08_RS13675 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CTI08_RS13675 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CTI08_RS13680 PF01039 Carboxyl transferase domain CTI08_RS13685 PF00378 Enoyl-CoA hydratase/isomerase CTI08_RS13690 PF00364 Biotin-requiring enzyme CTI08_RS13690 PF02785 Biotin carboxylase C-terminal domain CTI08_RS13690 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CTI08_RS13690 PF18140 Propionyl-coenzyme A carboxylase BT domain CTI08_RS13690 PF00289 Biotin carboxylase, N-terminal domain CTI08_RS13695 PF00682 HMGL-like CTI08_RS13700 PF03466 LysR substrate binding domain CTI08_RS13700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTI08_RS13715 PF02770 Acyl-CoA dehydrogenase, middle domain CTI08_RS13715 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CTI08_RS13715 PF12806 Acetyl-CoA dehydrogenase C-terminal like CTI08_RS13715 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CTI08_RS13725 PF07690 Major Facilitator Superfamily CTI08_RS13735 PF01144 Coenzyme A transferase CTI08_RS13740 PF01144 Coenzyme A transferase CTI08_RS13745 PF07690 Major Facilitator Superfamily CTI08_RS13750 PF02770 Acyl-CoA dehydrogenase, middle domain CTI08_RS13750 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CTI08_RS13750 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CTI08_RS13755 PF00378 Enoyl-CoA hydratase/isomerase CTI08_RS13765 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CTI08_RS13765 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CTI08_RS13765 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain CTI08_RS13770 PF00108 Thiolase, N-terminal domain CTI08_RS13770 PF02803 Thiolase, C-terminal domain CTI08_RS13775 PF09339 IclR helix-turn-helix domain CTI08_RS13780 PF07690 Major Facilitator Superfamily CTI08_RS13785 PF03060 Nitronate monooxygenase CTI08_RS13790 PF00378 Enoyl-CoA hydratase/isomerase CTI08_RS13795 PF09339 IclR helix-turn-helix domain CTI08_RS13800 PF02515 CoA-transferase family III CTI08_RS13805 PF02770 Acyl-CoA dehydrogenase, middle domain CTI08_RS13805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CTI08_RS13805 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CTI08_RS13810 PF07690 Major Facilitator Superfamily CTI08_RS13815 PF13419 Haloacid dehalogenase-like hydrolase CTI08_RS13820 PF00266 Aminotransferase class-V CTI08_RS13825 PF01266 FAD dependent oxidoreductase CTI08_RS13830 PF00528 Binding-protein-dependent transport system inner membrane component CTI08_RS13835 PF08402 TOBE domain CTI08_RS13835 PF00005 ABC transporter CTI08_RS13845 PF00392 Bacterial regulatory proteins, gntR family CTI08_RS13845 PF07702 UTRA domain CTI08_RS13850 PF01494 FAD binding domain CTI08_RS13855 PF01614 Bacterial transcriptional regulator CTI08_RS13855 PF09339 IclR helix-turn-helix domain CTI08_RS13860 PF02525 Flavodoxin-like fold CTI08_RS13865 PF03466 LysR substrate binding domain CTI08_RS13865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTI08_RS13870 PF02627 Carboxymuconolactone decarboxylase family CTI08_RS13875 PF00171 Aldehyde dehydrogenase family CTI08_RS13885 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CTI08_RS13895 PF00171 Aldehyde dehydrogenase family CTI08_RS13900 PF00296 Luciferase-like monooxygenase CTI08_RS13905 PF01613 Flavin reductase like domain CTI08_RS13910 PF12697 Alpha/beta hydrolase family CTI08_RS13930 PF01292 Prokaryotic cytochrome b561 CTI08_RS13935 PF00199 Catalase CTI08_RS13975 PF03061 Thioesterase superfamily CTI08_RS13980 PF00132 Bacterial transferase hexapeptide (six repeats) CTI08_RS13985 PF07848 PaaX-like protein CTI08_RS13985 PF08223 PaaX-like protein C-terminal domain CTI08_RS13990 PF14535 AMP-binding enzyme C-terminal domain CTI08_RS13990 PF00501 AMP-binding enzyme CTI08_RS13995 PF02803 Thiolase, C-terminal domain CTI08_RS13995 PF00108 Thiolase, N-terminal domain CTI08_RS14000 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CTI08_RS14000 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain CTI08_RS14000 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CTI08_RS14005 PF00378 Enoyl-CoA hydratase/isomerase CTI08_RS14010 PF00378 Enoyl-CoA hydratase/isomerase CTI08_RS14015 PF00111 2Fe-2S iron-sulfur cluster binding domain CTI08_RS14015 PF00970 Oxidoreductase FAD-binding domain CTI08_RS14015 PF00175 Oxidoreductase NAD-binding domain CTI08_RS14020 PF01883 Iron-sulfur cluster assembly protein CTI08_RS14025 PF05138 Phenylacetic acid catabolic protein CTI08_RS14030 PF06243 Phenylacetic acid degradation B CTI08_RS14035 PF05138 Phenylacetic acid catabolic protein CTI08_RS14040 PF01575 MaoC like domain CTI08_RS14040 PF00171 Aldehyde dehydrogenase family CTI08_RS14045 PF03313 Serine dehydratase alpha chain CTI08_RS14045 PF03315 Serine dehydratase beta chain CTI08_RS14050 PF13520 Amino acid permease CTI08_RS14055 PF00171 Aldehyde dehydrogenase family CTI08_RS14080 PF04324 BFD-like [2Fe-2S] binding domain CTI08_RS14080 PF07992 Pyridine nucleotide-disulphide oxidoreductase CTI08_RS14090 PF01266 FAD dependent oxidoreductase CTI08_RS14095 PF05544 Proline racemase CTI08_RS14100 PF00392 Bacterial regulatory proteins, gntR family CTI08_RS14110 PF00701 Dihydrodipicolinate synthetase family CTI08_RS14125 PF00376 MerR family regulatory protein CTI08_RS14125 PF09278 MerR, DNA binding CTI08_RS14135 PF02677 Epoxyqueuosine reductase QueH CTI08_RS14150 PF07690 Major Facilitator Superfamily CTI08_RS14155 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CTI08_RS14165 PF03466 LysR substrate binding domain CTI08_RS14165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTI08_RS14185 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE CTI08_RS14190 PF06812 ImpA, N-terminal, type VI secretion system CTI08_RS14195 PF07724 AAA domain (Cdc48 subfamily) CTI08_RS14195 PF17871 AAA lid domain CTI08_RS14195 PF00004 ATPase family associated with various cellular activities (AAA) CTI08_RS14195 PF10431 C-terminal, D2-small domain, of ClpB protein CTI08_RS14205 PF00691 OmpA family CTI08_RS14205 PF01389 OmpA-like transmembrane domain CTI08_RS14215 PF06744 Type VI secretion protein IcmF C-terminal CTI08_RS14215 PF06761 Intracellular multiplication and human macrophage-killing CTI08_RS14215 PF14331 ImcF-related N-terminal domain CTI08_RS14230 PF05947 Type VI secretion system, TssF CTI08_RS14245 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath CTI08_RS14275 PF00005 ABC transporter CTI08_RS14280 PF00497 Bacterial extracellular solute-binding proteins, family 3 CTI08_RS14285 PF01425 Amidase CTI08_RS14290 PF01402 Ribbon-helix-helix protein, copG family CTI08_RS14290 PF08753 NikR C terminal nickel binding domain CTI08_RS14310 PF02525 Flavodoxin-like fold CTI08_RS14315 PF00289 Biotin carboxylase, N-terminal domain CTI08_RS14315 PF02785 Biotin carboxylase C-terminal domain CTI08_RS14315 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CTI08_RS14330 PF00107 Zinc-binding dehydrogenase CTI08_RS14330 PF13823 Alcohol dehydrogenase GroES-associated CTI08_RS14330 PF08240 Alcohol dehydrogenase GroES-like domain CTI08_RS14340 PF00440 Bacterial regulatory proteins, tetR family CTI08_RS14365 PF00654 Voltage gated chloride channel CTI08_RS14370 PF00289 Biotin carboxylase, N-terminal domain CTI08_RS14370 PF02785 Biotin carboxylase C-terminal domain CTI08_RS14370 PF00364 Biotin-requiring enzyme CTI08_RS14370 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CTI08_RS14380 PF07286 Protein of unknown function (DUF1445) CTI08_RS14385 PF03746 LamB/YcsF family CTI08_RS14390 PF01566 Natural resistance-associated macrophage protein CTI08_RS14395 PF03466 LysR substrate binding domain CTI08_RS14395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTI08_RS14410 PF03527 RHS protein CTI08_RS14410 PF05593 RHS Repeat CTI08_RS14415 PF04717 Type VI secretion system, phage-baseplate injector CTI08_RS14415 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) CTI08_RS14415 PF13296 Putative type VI secretion system Rhs element Vgr CTI08_RS14430 PF13419 Haloacid dehalogenase-like hydrolase CTI08_RS14450 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CTI08_RS14450 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CTI08_RS14475 PF07690 Major Facilitator Superfamily CTI08_RS14485 PF03279 Bacterial lipid A biosynthesis acyltransferase CTI08_RS14490 PF03707 Bacterial signalling protein N terminal repeat CTI08_RS14490 PF00990 Diguanylate cyclase, GGDEF domain CTI08_RS14490 PF00563 EAL domain CTI08_RS14495 PF00892 EamA-like transporter family CTI08_RS14500 PF01037 Lrp/AsnC ligand binding domain CTI08_RS14505 PF05190 MutS family domain IV CTI08_RS14505 PF05188 MutS domain II CTI08_RS14505 PF00488 MutS domain V CTI08_RS14505 PF01624 MutS domain I CTI08_RS14505 PF05192 MutS domain III CTI08_RS14515 PF11953 Domain of unknown function (DUF3470) CTI08_RS14515 PF00037 4Fe-4S binding domain CTI08_RS14525 PF01596 O-methyltransferase CTI08_RS14535 PF00132 Bacterial transferase hexapeptide (six repeats) CTI08_RS14540 PF01205 Uncharacterized protein family UPF0029 CTI08_RS14550 PF03412 Peptidase C39 family CTI08_RS14550 PF00664 ABC transporter transmembrane region CTI08_RS14550 PF00005 ABC transporter CTI08_RS14555 PF02321 Outer membrane efflux protein CTI08_RS14565 PF12399 Branched-chain amino acid ATP-binding cassette transporter CTI08_RS14565 PF00005 ABC transporter CTI08_RS14570 PF03968 OstA-like protein CTI08_RS14585 PF01380 SIS domain CTI08_RS14585 PF00571 CBS domain CTI08_RS14590 PF09190 DALR domain CTI08_RS14590 PF01406 tRNA synthetases class I (C) catalytic domain CTI08_RS14620 PF01638 HxlR-like helix-turn-helix CTI08_RS14625 PF07690 Major Facilitator Superfamily CTI08_RS14655 PF03807 NADP oxidoreductase coenzyme F420-dependent CTI08_RS14655 PF14748 Pyrroline-5-carboxylate reductase dimerisation CTI08_RS14665 PF00313 'Cold-shock' DNA-binding domain CTI08_RS14670 PF01810 LysE type translocator CTI08_RS14705 PF02601 Exonuclease VII, large subunit CTI08_RS14705 PF13742 OB-fold nucleic acid binding domain CTI08_RS14745 PF00376 MerR family regulatory protein CTI08_RS14745 PF09278 MerR, DNA binding CTI08_RS14750 PF00403 Heavy-metal-associated domain CTI08_RS14760 PF03466 LysR substrate binding domain CTI08_RS14760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTI08_RS14765 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CTI08_RS14765 PF00355 Rieske [2Fe-2S] domain CTI08_RS14770 PF00866 Ring hydroxylating beta subunit CTI08_RS14775 PF00175 Oxidoreductase NAD-binding domain CTI08_RS14775 PF00111 2Fe-2S iron-sulfur cluster binding domain CTI08_RS14775 PF00970 Oxidoreductase FAD-binding domain CTI08_RS14780 PF00106 short chain dehydrogenase CTI08_RS14785 PF03594 Benzoate membrane transport protein CTI08_RS14790 PF07690 Major Facilitator Superfamily CTI08_RS14800 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CTI08_RS14800 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CTI08_RS14805 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CTI08_RS14805 PF00271 Helicase conserved C-terminal domain CTI08_RS14805 PF04408 Helicase associated domain (HA2) CTI08_RS14805 PF11898 Domain of unknown function (DUF3418) CTI08_RS14805 PF00270 DEAD/DEAH box helicase CTI08_RS14810 PF00578 AhpC/TSA family CTI08_RS14810 PF10417 C-terminal domain of 1-Cys peroxiredoxin CTI08_RS14830 PF07992 Pyridine nucleotide-disulphide oxidoreductase CTI08_RS14830 PF13192 Thioredoxin domain CTI08_RS14840 PF00043 Glutathione S-transferase, C-terminal domain CTI08_RS14840 PF02798 Glutathione S-transferase, N-terminal domain CTI08_RS14850 PF02390 Putative methyltransferase CTI08_RS14855 PF13417 Glutathione S-transferase, N-terminal domain CTI08_RS14855 PF00043 Glutathione S-transferase, C-terminal domain CTI08_RS14865 PF13488 Glycine zipper CTI08_RS14865 PF00691 OmpA family CTI08_RS14870 PF01979 Amidohydrolase family CTI08_RS14875 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CTI08_RS14875 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CTI08_RS14885 PF10672 S-adenosylmethionine-dependent methyltransferase CTI08_RS14885 PF02926 THUMP domain CTI08_RS14885 PF01170 Putative RNA methylase family UPF0020 CTI08_RS14900 PF02861 Clp amino terminal domain, pathogenicity island component CTI08_RS14900 PF00004 ATPase family associated with various cellular activities (AAA) CTI08_RS14900 PF17871 AAA lid domain CTI08_RS14900 PF10431 C-terminal, D2-small domain, of ClpB protein CTI08_RS14900 PF07724 AAA domain (Cdc48 subfamily) CTI08_RS14915 PF02566 OsmC-like protein CTI08_RS14920 PF13545 Crp-like helix-turn-helix domain CTI08_RS14920 PF00027 Cyclic nucleotide-binding domain CTI08_RS14925 PF00248 Aldo/keto reductase family CTI08_RS14940 PF00709 Adenylosuccinate synthetase CTI08_RS14945 PF13393 Histidyl-tRNA synthetase CTI08_RS14950 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CTI08_RS14950 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CTI08_RS14955 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CTI08_RS14955 PF01411 tRNA synthetases class II (A) CTI08_RS14955 PF02272 DHHA1 domain CTI08_RS14960 PF00589 Phage integrase family CTI08_RS14960 PF13356 Arm DNA-binding domain CTI08_RS14975 PF00717 Peptidase S24-like CTI08_RS14980 PF00817 impB/mucB/samB family CTI08_RS14980 PF11799 impB/mucB/samB family C-terminal domain CTI08_RS14980 PF13438 Domain of unknown function (DUF4113) CTI08_RS15125 PF07690 Major Facilitator Superfamily CTI08_RS15130 PF13533 Biotin-lipoyl like CTI08_RS15135 PF03061 Thioesterase superfamily CTI08_RS15140 PF00490 Delta-aminolevulinic acid dehydratase CTI08_RS15145 PF01266 FAD dependent oxidoreductase CTI08_RS15150 PF01370 NAD dependent epimerase/dehydratase family CTI08_RS15150 PF08338 Domain of unknown function (DUF1731) CTI08_RS15170 PF00149 Calcineurin-like phosphoesterase CTI08_RS15170 PF12320 Type 5 capsule protein repressor C-terminal domain CTI08_RS15180 PF01168 Alanine racemase, N-terminal domain CTI08_RS15185 PF00437 Type II/IV secretion system protein CTI08_RS15190 PF00437 Type II/IV secretion system protein CTI08_RS15195 PF01475 Ferric uptake regulator family CTI08_RS15200 PF04355 SmpA / OmlA family CTI08_RS15205 PF03658 RnfH family Ubiquitin CTI08_RS15220 PF01814 Hemerythrin HHE cation binding domain CTI08_RS15225 PF13230 Glutamine amidotransferases class-II CTI08_RS15235 PF00696 Amino acid kinase family CTI08_RS15240 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CTI08_RS15240 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CTI08_RS15240 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CTI08_RS15240 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CTI08_RS15245 PF00692 dUTPase CTI08_RS15250 PF00580 UvrD/REP helicase N-terminal domain CTI08_RS15250 PF13361 UvrD-like helicase C-terminal domain CTI08_RS15255 PF00691 OmpA family CTI08_RS15255 PF13488 Glycine zipper CTI08_RS15260 PF01553 Acyltransferase CTI08_RS15270 PF03775 Septum formation inhibitor MinC, C-terminal domain CTI08_RS15275 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CTI08_RS15280 PF03776 Septum formation topological specificity factor MinE CTI08_RS15295 PF01810 LysE type translocator CTI08_RS15300 PF17854 FtsK alpha domain CTI08_RS15300 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CTI08_RS15300 PF09397 Ftsk gamma domain CTI08_RS15300 PF01580 FtsK/SpoIIIE family CTI08_RS15305 PF07992 Pyridine nucleotide-disulphide oxidoreductase CTI08_RS15310 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CTI08_RS15315 PF04376 Arginine-tRNA-protein transferase, N terminus CTI08_RS15315 PF04377 Arginine-tRNA-protein transferase, C terminus CTI08_RS15320 PF00583 Acetyltransferase (GNAT) family CTI08_RS15335 PF00009 Elongation factor Tu GTP binding domain CTI08_RS15335 PF03144 Elongation factor Tu domain 2 CTI08_RS15335 PF03143 Elongation factor Tu C-terminal domain CTI08_RS15340 PF03144 Elongation factor Tu domain 2 CTI08_RS15340 PF00009 Elongation factor Tu GTP binding domain CTI08_RS15340 PF00679 Elongation factor G C-terminus CTI08_RS15340 PF14492 Elongation Factor G, domain II CTI08_RS15340 PF03764 Elongation factor G, domain IV CTI08_RS15345 PF00177 Ribosomal protein S7p/S5e CTI08_RS15350 PF00164 Ribosomal protein S12/S23 CTI08_RS15360 PF02801 Beta-ketoacyl synthase, C-terminal domain CTI08_RS15360 PF00109 Beta-ketoacyl synthase, N-terminal domain CTI08_RS15365 PF03653 Uncharacterised protein family (UPF0093) CTI08_RS15370 PF05726 Pirin C-terminal cupin domain CTI08_RS15370 PF02678 Pirin CTI08_RS15380 PF02540 NAD synthase CTI08_RS15380 PF00795 Carbon-nitrogen hydrolase CTI08_RS15395 PF00111 2Fe-2S iron-sulfur cluster binding domain CTI08_RS15395 PF00175 Oxidoreductase NAD-binding domain CTI08_RS15395 PF00970 Oxidoreductase FAD-binding domain CTI08_RS15400 PF00171 Aldehyde dehydrogenase family CTI08_RS15405 PF00355 Rieske [2Fe-2S] domain CTI08_RS15405 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CTI08_RS15410 PF07859 alpha/beta hydrolase fold CTI08_RS15415 PF02028 BCCT, betaine/carnitine/choline family transporter CTI08_RS15420 PF00180 Isocitrate/isopropylmalate dehydrogenase CTI08_RS15425 PF03466 LysR substrate binding domain CTI08_RS15425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTI08_RS15445 PF00037 4Fe-4S binding domain CTI08_RS15450 PF01467 Cytidylyltransferase-like CTI08_RS15455 PF01668 SmpB protein CTI08_RS15460 PF03358 NADPH-dependent FMN reductase CTI08_RS15465 PF02578 Multi-copper polyphenol oxidoreductase laccase CTI08_RS15470 PF01479 S4 domain CTI08_RS15470 PF00849 RNA pseudouridylate synthase CTI08_RS15475 PF13525 Outer membrane lipoprotein CTI08_RS15480 PF10410 DnaB-helicase binding domain of primase CTI08_RS15480 PF08275 DNA primase catalytic core, N-terminal domain CTI08_RS15480 PF08278 DNA primase DnaG DnaB-binding CTI08_RS15480 PF01807 CHC2 zinc finger CTI08_RS15485 PF01488 Shikimate / quinate 5-dehydrogenase CTI08_RS15485 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CTI08_RS15485 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CTI08_RS15495 PF03550 Outer membrane lipoprotein LolB CTI08_RS15500 PF08544 GHMP kinases C terminal CTI08_RS15500 PF00288 GHMP kinases N terminal domain CTI08_RS15525 PF14572 Phosphoribosyl synthetase-associated domain CTI08_RS15525 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CTI08_RS15530 PF01386 Ribosomal L25p family CTI08_RS15535 PF01195 Peptidyl-tRNA hydrolase CTI08_RS15540 PF02261 Aspartate decarboxylase CTI08_RS15555 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CTI08_RS15565 PF03070 TENA/THI-4/PQQC family CTI08_RS15565 PF08543 Phosphomethylpyrimidine kinase CTI08_RS15565 PF02581 Thiamine monophosphate synthase CTI08_RS15570 PF01476 LysM domain CTI08_RS15570 PF04972 BON domain CTI08_RS15575 PF00550 Phosphopantetheine attachment site CTI08_RS15585 PF00698 Acyl transferase domain CTI08_RS15590 PF01783 Ribosomal L32p protein family CTI08_RS15595 PF02620 Large ribosomal RNA subunit accumulation protein YceD CTI08_RS15600 PF04315 Elongation factor P hydroxylase CTI08_RS15605 PF01300 Telomere recombination CTI08_RS15610 PF02616 Segregation and condensation protein ScpA CTI08_RS15615 PF04079 Segregation and condensation complex subunit ScpB CTI08_RS15620 PF01479 S4 domain CTI08_RS15620 PF00849 RNA pseudouridylate synthase CTI08_RS15635 PF00155 Aminotransferase class I and II CTI08_RS15640 PF00202 Aminotransferase class-III CTI08_RS15640 PF04055 Radical SAM superfamily CTI08_RS15640 PF06968 Biotin and Thiamin Synthesis associated domain CTI08_RS15645 PF12697 Alpha/beta hydrolase family CTI08_RS15645 PF08241 Methyltransferase domain CTI08_RS15650 PF02358 Trehalose-phosphatase CTI08_RS15655 PF00982 Glycosyltransferase family 20 CTI08_RS15660 PF07690 Major Facilitator Superfamily CTI08_RS15665 PF00210 Ferritin-like domain CTI08_RS15670 PF03120 NAD-dependent DNA ligase OB-fold domain CTI08_RS15670 PF01653 NAD-dependent DNA ligase adenylation domain CTI08_RS15670 PF12826 Helix-hairpin-helix motif CTI08_RS15670 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CTI08_RS15670 PF00533 BRCA1 C Terminus (BRCT) domain CTI08_RS15680 PF02463 RecF/RecN/SMC N terminal domain CTI08_RS15680 PF06470 SMC proteins Flexible Hinge Domain CTI08_RS15690 PF01925 Sulfite exporter TauE/SafE CTI08_RS15700 PF03309 Type III pantothenate kinase CTI08_RS15705 PF02881 SRP54-type protein, helical bundle domain CTI08_RS15705 PF00448 SRP54-type protein, GTPase domain CTI08_RS15705 PF02978 Signal peptide binding domain CTI08_RS15715 PF01207 Dihydrouridine synthase (Dus) CTI08_RS15750 PF00692 dUTPase CTI08_RS15765 PF01048 Phosphorylase superfamily CTI08_RS15775 PF10609 NUBPL iron-transfer P-loop NTPase CTI08_RS15785 PF01588 Putative tRNA binding domain CTI08_RS15785 PF09334 tRNA synthetases class I (M) CTI08_RS15810 PF13533 Biotin-lipoyl like CTI08_RS15815 PF00291 Pyridoxal-phosphate dependent enzyme CTI08_RS15830 PF05552 Conserved TM helix CTI08_RS15845 PF00970 Oxidoreductase FAD-binding domain CTI08_RS15845 PF00175 Oxidoreductase NAD-binding domain CTI08_RS15850 PF03466 LysR substrate binding domain CTI08_RS15850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTI08_RS15855 PF00313 'Cold-shock' DNA-binding domain CTI08_RS15865 PF00361 Proton-conducting membrane transporter CTI08_RS15870 PF00361 Proton-conducting membrane transporter CTI08_RS15875 PF00361 Proton-conducting membrane transporter CTI08_RS15875 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CTI08_RS15880 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CTI08_RS15885 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CTI08_RS15890 PF12838 4Fe-4S dicluster domain CTI08_RS15895 PF00146 NADH dehydrogenase CTI08_RS15900 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CTI08_RS15900 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CTI08_RS15900 PF00384 Molybdopterin oxidoreductase CTI08_RS15905 PF10531 SLBB domain CTI08_RS15905 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CTI08_RS15905 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CTI08_RS15915 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CTI08_RS15915 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CTI08_RS15920 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CTI08_RS15925 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CTI08_RS15930 PF17151 Periplasmic sensor domain CTI08_RS15930 PF00990 Diguanylate cyclase, GGDEF domain CTI08_RS15940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTI08_RS15940 PF00512 His Kinase A (phospho-acceptor) domain CTI08_RS15940 PF00672 HAMP domain CTI08_RS15945 PF00486 Transcriptional regulatory protein, C terminal CTI08_RS15945 PF00072 Response regulator receiver domain CTI08_RS15955 PF02867 Ribonucleotide reductase, barrel domain CTI08_RS15955 PF03477 ATP cone domain CTI08_RS15955 PF00317 Ribonucleotide reductase, all-alpha domain CTI08_RS15965 PF00268 Ribonucleotide reductase, small chain CTI08_RS15975 PF13755 Sensor N-terminal transmembrane domain CTI08_RS15975 PF00672 HAMP domain CTI08_RS15975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTI08_RS15975 PF00512 His Kinase A (phospho-acceptor) domain CTI08_RS15975 PF13756 Stimulus-sensing domain CTI08_RS16065 PF01011 PQQ enzyme repeat CTI08_RS16065 PF13360 PQQ-like domain CTI08_RS16085 PF02567 Phenazine biosynthesis-like protein CTI08_RS16115 PF01613 Flavin reductase like domain CTI08_RS16120 PF08267 Cobalamin-independent synthase, N-terminal domain CTI08_RS16120 PF01717 Cobalamin-independent synthase, Catalytic domain CTI08_RS16130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTI08_RS16130 PF03466 LysR substrate binding domain CTI08_RS16135 PF01810 LysE type translocator CTI08_RS16145 PF12833 Helix-turn-helix domain CTI08_RS16145 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CTI08_RS16150 PF01546 Peptidase family M20/M25/M40 CTI08_RS16150 PF07687 Peptidase dimerisation domain CTI08_RS16160 PF03466 LysR substrate binding domain CTI08_RS16160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTI08_RS16170 PF07690 Major Facilitator Superfamily CTI08_RS16180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTI08_RS16180 PF03466 LysR substrate binding domain CTI08_RS16185 PF14537 Cytochrome c3 CTI08_RS16185 PF00890 FAD binding domain CTI08_RS16195 PF02515 CoA-transferase family III CTI08_RS16200 PF07690 Major Facilitator Superfamily CTI08_RS16205 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CTI08_RS16205 PF02770 Acyl-CoA dehydrogenase, middle domain CTI08_RS16205 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CTI08_RS16210 PF03466 LysR substrate binding domain CTI08_RS16210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTI08_RS16215 PF00107 Zinc-binding dehydrogenase CTI08_RS16215 PF08240 Alcohol dehydrogenase GroES-like domain CTI08_RS16220 PF00962 Adenosine/AMP deaminase CTI08_RS16245 PF02445 Quinolinate synthetase A protein CTI08_RS16250 PF01960 ArgJ family CTI08_RS16255 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CTI08_RS16255 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CTI08_RS16260 PF00893 Small Multidrug Resistance protein CTI08_RS16270 PF05275 Copper resistance protein B precursor (CopB) CTI08_RS16275 PF00394 Multicopper oxidase CTI08_RS16275 PF07731 Multicopper oxidase CTI08_RS16275 PF07732 Multicopper oxidase CTI08_RS16290 PF00834 Ribulose-phosphate 3 epimerase family CTI08_RS16300 PF00756 Putative esterase CTI08_RS16310 PF04445 Putative SAM-dependent methyltransferase CTI08_RS16315 PF00814 Glycoprotease family CTI08_RS16320 PF00132 Bacterial transferase hexapeptide (six repeats) CTI08_RS16325 PF00293 NUDIX domain CTI08_RS16365 PF00425 chorismate binding enzyme CTI08_RS16365 PF04715 Anthranilate synthase component I, N terminal region CTI08_RS16370 PF00155 Aminotransferase class I and II CTI08_RS16375 PF00815 Histidinol dehydrogenase CTI08_RS16380 PF01634 ATP phosphoribosyltransferase CTI08_RS16385 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CTI08_RS16390 PF01722 BolA-like protein CTI08_RS16395 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CTI08_RS16400 PF04552 Sigma-54, DNA binding domain CTI08_RS16400 PF04963 Sigma-54 factor, core binding domain CTI08_RS16400 PF00309 Sigma-54 factor, Activator interacting domain (AID) CTI08_RS16445 PF00795 Carbon-nitrogen hydrolase CTI08_RS16455 PF01047 MarR family CTI08_RS16460 PF02566 OsmC-like protein CTI08_RS16465 PF00437 Type II/IV secretion system protein CTI08_RS16485 PF01612 3'-5' exonuclease CTI08_RS16485 PF00476 DNA polymerase family A CTI08_RS16485 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CTI08_RS16485 PF01367 5'-3' exonuclease, C-terminal SAM fold CTI08_RS16490 PF02325 YGGT family CTI08_RS16495 PF14748 Pyrroline-5-carboxylate reductase dimerisation CTI08_RS16495 PF03807 NADP oxidoreductase coenzyme F420-dependent CTI08_RS16500 PF01171 PP-loop family CTI08_RS16500 PF11734 TilS substrate C-terminal domain CTI08_RS16500 PF09179 TilS substrate binding domain CTI08_RS16505 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CTI08_RS16510 PF02541 Ppx/GppA phosphatase family CTI08_RS16515 PF00085 Thioredoxin CTI08_RS16520 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CTI08_RS16520 PF07498 Rho termination factor, N-terminal domain CTI08_RS16520 PF07497 Rho termination factor, RNA-binding domain CTI08_RS16535 PF00216 Bacterial DNA-binding protein CTI08_RS16540 PF03483 B3/4 domain CTI08_RS16540 PF03484 tRNA synthetase B5 domain CTI08_RS16540 PF03147 Ferredoxin-fold anticodon binding domain CTI08_RS16540 PF01588 Putative tRNA binding domain CTI08_RS16540 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CTI08_RS16545 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CTI08_RS16545 PF01409 tRNA synthetases class II core domain (F) CTI08_RS16565 PF00453 Ribosomal protein L20 CTI08_RS16570 PF01632 Ribosomal protein L35 CTI08_RS16575 PF07690 Major Facilitator Superfamily CTI08_RS16580 PF09335 SNARE associated Golgi protein CTI08_RS16585 PF02798 Glutathione S-transferase, N-terminal domain CTI08_RS16585 PF00043 Glutathione S-transferase, C-terminal domain CTI08_RS16595 PF05198 Translation initiation factor IF-3, N-terminal domain CTI08_RS16595 PF00707 Translation initiation factor IF-3, C-terminal domain CTI08_RS16600 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CTI08_RS16600 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CTI08_RS16600 PF02824 TGS domain CTI08_RS16600 PF03129 Anticodon binding domain CTI08_RS16605 PF00501 AMP-binding enzyme CTI08_RS16605 PF13193 AMP-binding enzyme C-terminal domain CTI08_RS16610 PF04751 Protein of unknown function (DUF615) CTI08_RS16615 PF00381 PTS HPr component phosphorylation site CTI08_RS16620 PF03668 P-loop ATPase protein family CTI08_RS16625 PF02569 Pantoate-beta-alanine ligase CTI08_RS16630 PF02548 Ketopantoate hydroxymethyltransferase CTI08_RS16635 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CTI08_RS16640 PF12626 Polymerase A arginine-rich C-terminus CTI08_RS16640 PF01743 Poly A polymerase head domain CTI08_RS16640 PF12627 Probable RNA and SrmB- binding site of polymerase A CTI08_RS16650 PF03819 MazG nucleotide pyrophosphohydrolase domain CTI08_RS16660 PF00905 Penicillin binding protein transpeptidase domain CTI08_RS16675 PF13291 ACT domain CTI08_RS16675 PF04607 Region found in RelA / SpoT proteins CTI08_RS16675 PF02824 TGS domain CTI08_RS16680 PF05958 tRNA (Uracil-5-)-methyltransferase CTI08_RS16690 PF00291 Pyridoxal-phosphate dependent enzyme CTI08_RS16695 PF01627 Hpt domain CTI08_RS16695 PF00512 His Kinase A (phospho-acceptor) domain CTI08_RS16695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTI08_RS16695 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CTI08_RS16695 PF00072 Response regulator receiver domain CTI08_RS16695 PF00672 HAMP domain CTI08_RS16700 PF00378 Enoyl-CoA hydratase/isomerase CTI08_RS16705 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CTI08_RS16705 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CTI08_RS16710 PF01261 Xylose isomerase-like TIM barrel CTI08_RS16720 PF00106 short chain dehydrogenase CTI08_RS16725 PF02233 NAD(P) transhydrogenase beta subunit CTI08_RS16730 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CTI08_RS16735 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CTI08_RS16735 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CTI08_RS16740 PF00892 EamA-like transporter family CTI08_RS16750 PF07690 Major Facilitator Superfamily CTI08_RS16755 PF01207 Dihydrouridine synthase (Dus) CTI08_RS16765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTI08_RS16765 PF03466 LysR substrate binding domain CTI08_RS16775 PF00899 ThiF family CTI08_RS16785 PF00694 Aconitase C-terminal domain CTI08_RS16785 PF00330 Aconitase family (aconitate hydratase) CTI08_RS16790 PF01026 TatD related DNase CTI08_RS16805 PF03144 Elongation factor Tu domain 2 CTI08_RS16805 PF00009 Elongation factor Tu GTP binding domain CTI08_RS16805 PF16658 Class II release factor RF3, C-terminal domain CTI08_RS16830 PF03707 Bacterial signalling protein N terminal repeat CTI08_RS16830 PF00563 EAL domain CTI08_RS16830 PF00990 Diguanylate cyclase, GGDEF domain CTI08_RS16835 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CTI08_RS16835 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CTI08_RS16840 PF10369 Small subunit of acetolactate synthase CTI08_RS16845 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CTI08_RS16845 PF00205 Thiamine pyrophosphate enzyme, central domain CTI08_RS16845 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CTI08_RS16855 PF08264 Anticodon-binding domain of tRNA CTI08_RS16855 PF09334 tRNA synthetases class I (M) CTI08_RS16855 PF13603 Leucyl-tRNA synthetase, Domain 2 CTI08_RS16855 PF00133 tRNA synthetases class I (I, L, M and V) CTI08_RS16870 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CTI08_RS16875 PF12704 MacB-like periplasmic core domain CTI08_RS16875 PF02687 FtsX-like permease family CTI08_RS16875 PF00005 ABC transporter CTI08_RS16880 PF02321 Outer membrane efflux protein CTI08_RS16895 PF00929 Exonuclease CTI08_RS16900 PF03193 RsgA GTPase CTI08_RS16910 PF00462 Glutaredoxin CTI08_RS16915 PF02556 Preprotein translocase subunit SecB CTI08_RS16930 PF02801 Beta-ketoacyl synthase, C-terminal domain CTI08_RS16930 PF00109 Beta-ketoacyl synthase, N-terminal domain CTI08_RS16945 PF00109 Beta-ketoacyl synthase, N-terminal domain CTI08_RS16945 PF02801 Beta-ketoacyl synthase, C-terminal domain CTI08_RS16955 PF04820 Tryptophan halogenase CTI08_RS16975 PF00221 Aromatic amino acid lyase CTI08_RS16990 PF00501 AMP-binding enzyme CTI08_RS16990 PF13193 AMP-binding enzyme C-terminal domain CTI08_RS17000 PF00550 Phosphopantetheine attachment site CTI08_RS17005 PF00550 Phosphopantetheine attachment site CTI08_RS17020 PF01926 50S ribosome-binding GTPase CTI08_RS17020 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CTI08_RS17025 PF13360 PQQ-like domain CTI08_RS17035 PF13393 Histidyl-tRNA synthetase CTI08_RS17035 PF03129 Anticodon binding domain CTI08_RS17040 PF04551 GcpE protein CTI08_RS17045 PF13464 Domain of unknown function (DUF4115) CTI08_RS17055 PF04055 Radical SAM superfamily CTI08_RS17060 PF00334 Nucleoside diphosphate kinase CTI08_RS17065 PF04384 Iron-sulphur cluster assembly CTI08_RS17070 PF01569 PAP2 superfamily CTI08_RS17075 PF13439 Glycosyltransferase Family 4 CTI08_RS17075 PF00534 Glycosyl transferases group 1 CTI08_RS17080 PF00595 PDZ domain CTI08_RS17080 PF11818 C-terminal domain of tail specific protease (DUF3340) CTI08_RS17080 PF03572 Peptidase family S41 CTI08_RS17080 PF17804 Tail specific protease N-terminal domain CTI08_RS17085 PF00933 Glycosyl hydrolase family 3 N terminal domain CTI08_RS17095 PF00561 alpha/beta hydrolase fold CTI08_RS17100 PF00171 Aldehyde dehydrogenase family CTI08_RS17105 PF00171 Aldehyde dehydrogenase family CTI08_RS17110 PF01202 Shikimate kinase CTI08_RS17115 PF02447 GntP family permease CTI08_RS17120 PF01081 KDPG and KHG aldolase CTI08_RS17125 PF00920 Dehydratase family CTI08_RS17135 PF00871 Acetokinase family CTI08_RS17140 PF07085 DRTGG domain CTI08_RS17140 PF01515 Phosphate acetyl/butaryl transferase CTI08_RS17145 PF05683 Fumarase C-terminus CTI08_RS17145 PF05681 Fumarate hydratase (Fumerase) CTI08_RS17160 PF06689 ClpX C4-type zinc finger CTI08_RS17160 PF10431 C-terminal, D2-small domain, of ClpB protein CTI08_RS17160 PF07724 AAA domain (Cdc48 subfamily) CTI08_RS17165 PF00574 Clp protease CTI08_RS17170 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CTI08_RS17170 PF05698 Bacterial trigger factor protein (TF) C-terminus CTI08_RS17170 PF05697 Bacterial trigger factor protein (TF) CTI08_RS17175 PF00593 TonB dependent receptor CTI08_RS17175 PF07715 TonB-dependent Receptor Plug Domain CTI08_RS17180 PF13640 2OG-Fe(II) oxygenase superfamily CTI08_RS17180 PF18331 PKHD-type hydroxylase C-terminal domain CTI08_RS17185 PF00682 HMGL-like CTI08_RS17185 PF08502 LeuA allosteric (dimerisation) domain CTI08_RS17190 PF00561 alpha/beta hydrolase fold CTI08_RS17195 PF00561 alpha/beta hydrolase fold CTI08_RS17195 PF07021 Methionine biosynthesis protein MetW CTI08_RS17205 PF01725 Ham1 family CTI08_RS17215 PF02416 mttA/Hcf106 family CTI08_RS17220 PF02416 mttA/Hcf106 family CTI08_RS17225 PF00902 Sec-independent protein translocase protein (TatC) CTI08_RS17245 PF01790 Prolipoprotein diacylglyceryl transferase CTI08_RS17260 PF00303 Thymidylate synthase CTI08_RS17270 PF00186 Dihydrofolate reductase CTI08_RS17280 PF01625 Peptide methionine sulfoxide reductase CTI08_RS17290 PF01618 MotA/TolQ/ExbB proton channel family CTI08_RS17300 PF01842 ACT domain CTI08_RS17300 PF00551 Formyl transferase CTI08_RS17310 PF00171 Aldehyde dehydrogenase family CTI08_RS17315 PF00830 Ribosomal L28 family CTI08_RS17320 PF00471 Ribosomal protein L33 CTI08_RS17325 PF00999 Sodium/hydrogen exchanger family CTI08_RS17325 PF02254 TrkA-N domain CTI08_RS17345 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) CTI08_RS17350 PF00580 UvrD/REP helicase N-terminal domain CTI08_RS17350 PF13361 UvrD-like helicase C-terminal domain CTI08_RS17365 PF01396 Topoisomerase DNA binding C4 zinc finger CTI08_RS17365 PF08272 Topoisomerase I zinc-ribbon-like CTI08_RS17365 PF01131 DNA topoisomerase CTI08_RS17365 PF01751 Toprim domain CTI08_RS17375 PF01638 HxlR-like helix-turn-helix CTI08_RS17380 PF08240 Alcohol dehydrogenase GroES-like domain CTI08_RS17380 PF00107 Zinc-binding dehydrogenase CTI08_RS17385 PF04102 SlyX CTI08_RS17390 PF12848 ABC transporter CTI08_RS17390 PF16326 ABC transporter C-terminal domain CTI08_RS17390 PF00005 ABC transporter CTI08_RS17395 PF01810 LysE type translocator CTI08_RS17400 PF03279 Bacterial lipid A biosynthesis acyltransferase CTI08_RS17410 PF00375 Sodium:dicarboxylate symporter family CTI08_RS17420 PF00905 Penicillin binding protein transpeptidase domain CTI08_RS17435 PF01118 Semialdehyde dehydrogenase, NAD binding domain CTI08_RS17435 PF02774 Semialdehyde dehydrogenase, dimerisation domain CTI08_RS17455 PF01416 tRNA pseudouridine synthase CTI08_RS17465 PF01176 Translation initiation factor 1A / IF-1 CTI08_RS17480 PF00180 Isocitrate/isopropylmalate dehydrogenase CTI08_RS17490 PF00694 Aconitase C-terminal domain CTI08_RS17495 PF00330 Aconitase family (aconitate hydratase) CTI08_RS17505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTI08_RS17505 PF03466 LysR substrate binding domain CTI08_RS17525 PF00293 NUDIX domain CTI08_RS17530 PF01590 GAF domain CTI08_RS17530 PF05524 PEP-utilising enzyme, N-terminal CTI08_RS17530 PF02896 PEP-utilising enzyme, TIM barrel domain CTI08_RS17530 PF00391 PEP-utilising enzyme, mobile domain CTI08_RS17535 PF00141 Peroxidase CTI08_RS17540 PF12706 Beta-lactamase superfamily domain CTI08_RS17545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTI08_RS17545 PF03466 LysR substrate binding domain CTI08_RS17555 PF02798 Glutathione S-transferase, N-terminal domain CTI08_RS17560 PF13280 WYL domain CTI08_RS17560 PF08279 HTH domain CTI08_RS17565 PF13419 Haloacid dehalogenase-like hydrolase CTI08_RS17570 PF00849 RNA pseudouridylate synthase CTI08_RS17570 PF01479 S4 domain CTI08_RS17580 PF10150 Ribonuclease E/G family CTI08_RS17580 PF12111 Polyribonucleotide phosphorylase C terminal CTI08_RS17580 PF00575 S1 RNA binding domain CTI08_RS17585 PF00501 AMP-binding enzyme CTI08_RS17585 PF13193 AMP-binding enzyme C-terminal domain CTI08_RS17600 PF03466 LysR substrate binding domain CTI08_RS17600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CTI08_RS17605 PF00106 short chain dehydrogenase CTI08_RS17610 PF06969 HemN C-terminal domain CTI08_RS17610 PF04055 Radical SAM superfamily CTI08_RS17620 PF01554 MatE CTI08_RS17625 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CTI08_RS17625 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CTI08_RS17625 PF02770 Acyl-CoA dehydrogenase, middle domain CTI08_RS17630 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CTI08_RS17630 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CTI08_RS17635 PF03109 ABC1 family CTI08_RS17640 PF01197 Ribosomal protein L31 CTI08_RS17655 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CTI08_RS17675 PF03884 DNA gyrase inhibitor YacG CTI08_RS17680 PF00753 Metallo-beta-lactamase superfamily CTI08_RS17685 PF00762 Ferrochelatase CTI08_RS17695 PF01177 Asp/Glu/Hydantoin racemase CTI08_RS17710 PF01206 Sulfurtransferase TusA CTI08_RS17715 PF00571 CBS domain CTI08_RS17715 PF03471 Transporter associated domain CTI08_RS17720 PF00795 Carbon-nitrogen hydrolase CTI08_RS17725 PF01588 Putative tRNA binding domain CTI08_RS17735 PF07963 Prokaryotic N-terminal methylation motif CTI08_RS17735 PF08334 Type II secretion system (T2SS), protein G CTI08_RS17740 PF00482 Type II secretion system (T2SS), protein F CTI08_RS17745 PF00270 DEAD/DEAH box helicase CTI08_RS17745 PF00271 Helicase conserved C-terminal domain CTI08_RS17745 PF18074 Primosomal protein N C-terminal domain CTI08_RS17745 PF17764 3′ DNA-binding domain (3′BD) CTI08_RS17745 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CTI08_RS17750 PF02254 TrkA-N domain CTI08_RS17750 PF00999 Sodium/hydrogen exchanger family CTI08_RS17755 PF01430 Hsp33 protein CTI08_RS17765 PF00226 DnaJ domain CTI08_RS17765 PF01556 DnaJ C terminal domain CTI08_RS17775 PF01544 CorA-like Mg2+ transporter protein CTI08_RS17780 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CTI08_RS17780 PF01138 3' exoribonuclease family, domain 1 CTI08_RS17780 PF03725 3' exoribonuclease family, domain 2 CTI08_RS17780 PF00575 S1 RNA binding domain CTI08_RS17780 PF00013 KH domain CTI08_RS17785 PF00312 Ribosomal protein S15 CTI08_RS17790 PF00144 Beta-lactamase CTI08_RS17795 PF13538 UvrD-like helicase C-terminal domain CTI08_RS17800 PF13361 UvrD-like helicase C-terminal domain CTI08_RS17800 PF12705 PD-(D/E)XK nuclease superfamily CTI08_RS17800 PF00580 UvrD/REP helicase N-terminal domain CTI08_RS17805 PF17946 RecC C-terminal domain CTI08_RS17815 PF03976 Polyphosphate kinase 2 (PPK2) CTI08_RS17825 PF01209 ubiE/COQ5 methyltransferase family CTI08_RS17835 PF03109 ABC1 family CTI08_RS17840 PF01494 FAD binding domain CTI08_RS17845 PF01502 Phosphoribosyl-AMP cyclohydrolase CTI08_RS17860 PF00361 Proton-conducting membrane transporter CTI08_RS17860 PF13244 Domain of unknown function (DUF4040) CTI08_RS17860 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CTI08_RS17860 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter CTI08_RS17865 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CTI08_RS17870 PF00361 Proton-conducting membrane transporter CTI08_RS17875 PF01899 Na+/H+ ion antiporter subunit CTI08_RS17880 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) CTI08_RS17885 PF03334 Na+/H+ antiporter subunit CTI08_RS17890 PF02033 Ribosome-binding factor A CTI08_RS17895 PF04760 Translation initiation factor IF-2, N-terminal region CTI08_RS17895 PF08364 Bacterial translation initiation factor IF-2 associated region CTI08_RS17895 PF00009 Elongation factor Tu GTP binding domain CTI08_RS17895 PF11987 Translation-initiation factor 2 CTI08_RS17900 PF00575 S1 RNA binding domain CTI08_RS17900 PF08529 NusA N-terminal domain CTI08_RS17900 PF13184 NusA-like KH domain CTI08_RS17905 PF17384 RimP C-terminal SH3 domain CTI08_RS17905 PF02576 RimP N-terminal domain CTI08_RS17925 PF03840 Preprotein translocase SecG subunit CTI08_RS17930 PF00121 Triosephosphate isomerase CTI08_RS17935 PF00437 Type II/IV secretion system protein CTI08_RS17935 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CTI08_RS17940 PF00482 Type II secretion system (T2SS), protein F CTI08_RS17945 PF06750 Bacterial Peptidase A24 N-terminal domain CTI08_RS17945 PF01478 Type IV leader peptidase family CTI08_RS17950 PF01121 Dephospho-CoA kinase CTI08_RS17960 PF00588 SpoU rRNA Methylase family CTI08_RS17960 PF08032 RNA 2'-O ribose methyltransferase substrate binding CTI08_RS17965 PF06865 Pyrimidine/purine nucleoside phosphorylase CTI08_RS17975 PF02463 RecF/RecN/SMC N terminal domain CTI08_RS17980 PF02622 Uncharacterized ACR, COG1678 CTI08_RS17985 PF03652 Holliday junction resolvase CTI08_RS17990 PF13533 Biotin-lipoyl like CTI08_RS18015 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CTI08_RS18015 PF02805 Metal binding domain of Ada CTI08_RS18015 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CTI08_RS18015 PF12833 Helix-turn-helix domain CTI08_RS18020 PF01066 CDP-alcohol phosphatidyltransferase CTI08_RS18030 PF01541 GIY-YIG catalytic domain CTI08_RS18030 PF02151 UvrB/uvrC motif CTI08_RS18030 PF08459 UvrC Helix-hairpin-helix N-terminal CTI08_RS18060 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CTI08_RS18060 PF00378 Enoyl-CoA hydratase/isomerase CTI08_RS18060 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CTI08_RS18065 PF02803 Thiolase, C-terminal domain CTI08_RS18065 PF00108 Thiolase, N-terminal domain CTI08_RS18085 PF09278 MerR, DNA binding CTI08_RS18085 PF00376 MerR family regulatory protein CTI08_RS18095 PF01323 DSBA-like thioredoxin domain CTI08_RS18110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTI08_RS18110 PF00183 Hsp90 protein CTI08_RS18125 PF03553 Na+/H+ antiporter family CTI08_RS18125 PF13726 Na+-H+ antiporter family CTI08_RS18130 PF00561 alpha/beta hydrolase fold CTI08_RS18150 PF05000 RNA polymerase Rpb1, domain 4 CTI08_RS18150 PF04983 RNA polymerase Rpb1, domain 3 CTI08_RS18150 PF04997 RNA polymerase Rpb1, domain 1 CTI08_RS18150 PF00623 RNA polymerase Rpb1, domain 2 CTI08_RS18150 PF04998 RNA polymerase Rpb1, domain 5 CTI08_RS18155 PF04563 RNA polymerase beta subunit CTI08_RS18155 PF00562 RNA polymerase Rpb2, domain 6 CTI08_RS18155 PF04560 RNA polymerase Rpb2, domain 7 CTI08_RS18155 PF10385 RNA polymerase beta subunit external 1 domain CTI08_RS18155 PF04565 RNA polymerase Rpb2, domain 3 CTI08_RS18155 PF04561 RNA polymerase Rpb2, domain 2 CTI08_RS18160 PF00542 Ribosomal protein L7/L12 C-terminal domain CTI08_RS18160 PF16320 Ribosomal protein L7/L12 dimerisation domain CTI08_RS18165 PF00466 Ribosomal protein L10 CTI08_RS18170 PF00687 Ribosomal protein L1p/L10e family CTI08_RS18175 PF00298 Ribosomal protein L11, RNA binding domain CTI08_RS18175 PF03946 Ribosomal protein L11, N-terminal domain CTI08_RS18180 PF02357 Transcription termination factor nusG CTI08_RS18180 PF00467 KOW motif CTI08_RS18185 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CTI08_RS18195 PF03143 Elongation factor Tu C-terminal domain CTI08_RS18195 PF03144 Elongation factor Tu domain 2 CTI08_RS18195 PF00009 Elongation factor Tu GTP binding domain CTI08_RS18220 PF04715 Anthranilate synthase component I, N terminal region CTI08_RS18220 PF00425 chorismate binding enzyme CTI08_RS18225 PF13419 Haloacid dehalogenase-like hydrolase CTI08_RS18230 PF12401 Protein of unknown function (DUF2662) CTI08_RS18230 PF00498 FHA domain CTI08_RS18235 PF00263 Bacterial type II and III secretion system protein CTI08_RS18235 PF03958 Bacterial type II/III secretion system short domain CTI08_RS18250 PF00816 H-NS histone family CTI08_RS18275 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CTI08_RS18275 PF03900 Porphobilinogen deaminase, C-terminal domain CTI08_RS18280 PF00072 Response regulator receiver domain CTI08_RS18280 PF04397 LytTr DNA-binding domain CTI08_RS18285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTI08_RS18285 PF06580 Histidine kinase CTI08_RS18285 PF07694 5TMR of 5TMR-LYT CTI08_RS18290 PF00206 Lyase CTI08_RS18290 PF14698 Argininosuccinate lyase C-terminal CTI08_RS18295 PF04362 Bacterial Fe(2+) trafficking CTI08_RS18300 PF01895 PhoU domain CTI08_RS18305 PF02321 Outer membrane efflux protein CTI08_RS18310 PF00892 EamA-like transporter family CTI08_RS18325 PF01964 Radical SAM ThiC family CTI08_RS18325 PF13667 ThiC-associated domain CTI08_RS18330 PF00293 NUDIX domain CTI08_RS18335 PF00149 Calcineurin-like phosphoesterase CTI08_RS18340 PF01258 Prokaryotic dksA/traR C4-type zinc finger CTI08_RS18345 PF00749 tRNA synthetases class I (E and Q), catalytic domain CTI08_RS18350 PF01098 Cell cycle protein CTI08_RS18355 PF08245 Mur ligase middle domain CTI08_RS18355 PF02875 Mur ligase family, glutamate ligase domain CTI08_RS18365 PF07670 Nucleoside recognition CTI08_RS18365 PF02421 Ferrous iron transport protein B CTI08_RS18365 PF07664 Ferrous iron transport protein B C terminus CTI08_RS18375 PF00589 Phage integrase family CTI08_RS18375 PF02899 Phage integrase, N-terminal SAM-like domain CTI08_RS18380 PF13098 Thioredoxin-like domain CTI08_RS18380 PF10411 Disulfide bond isomerase protein N-terminus CTI08_RS18385 PF00742 Homoserine dehydrogenase CTI08_RS18385 PF01842 ACT domain CTI08_RS18385 PF03447 Homoserine dehydrogenase, NAD binding domain CTI08_RS18390 PF00291 Pyridoxal-phosphate dependent enzyme CTI08_RS18395 PF00768 D-alanyl-D-alanine carboxypeptidase CTI08_RS18400 PF00072 Response regulator receiver domain CTI08_RS18400 PF00196 Bacterial regulatory proteins, luxR family CTI08_RS18405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTI08_RS18405 PF00512 His Kinase A (phospho-acceptor) domain CTI08_RS18410 PF02954 Bacterial regulatory protein, Fis family CTI08_RS18410 PF00158 Sigma-54 interaction domain CTI08_RS18410 PF00072 Response regulator receiver domain CTI08_RS18415 PF00595 PDZ domain CTI08_RS18415 PF03572 Peptidase family S41 CTI08_RS18420 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CTI08_RS18420 PF01676 Metalloenzyme superfamily CTI08_RS18425 PF03739 Lipopolysaccharide export system permease LptF/LptG CTI08_RS18435 PF02789 Cytosol aminopeptidase family, N-terminal domain CTI08_RS18435 PF00883 Cytosol aminopeptidase family, catalytic domain CTI08_RS18455 PF00677 Lumazine binding domain CTI08_RS18465 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CTI08_RS18465 PF01872 RibD C-terminal domain CTI08_RS18470 PF03477 ATP cone domain CTI08_RS18475 PF00909 Ammonium Transporter Family CTI08_RS18480 PF00543 Nitrogen regulatory protein P-II CTI08_RS18490 PF01078 Magnesium chelatase, subunit ChlI CTI08_RS18490 PF13335 Magnesium chelatase, subunit ChlI C-terminal CTI08_RS18500 PF01636 Phosphotransferase enzyme family CTI08_RS18510 PF01636 Phosphotransferase enzyme family CTI08_RS18520 PF01609 Transposase DDE domain CTI08_RS18535 PF01609 Transposase DDE domain CTI08_RS18545 PF01636 Phosphotransferase enzyme family CTI08_RS18550 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase CTI08_RS18570 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CTI08_RS18570 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CTI08_RS18570 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CTI08_RS18570 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CTI08_RS18575 PF00809 Pterin binding enzyme CTI08_RS18600 PF00665 Integrase core domain CTI08_RS18625 PF02899 Phage integrase, N-terminal SAM-like domain CTI08_RS18625 PF00589 Phage integrase family CTI08_RS18655 PF00916 Sulfate permease family CTI08_RS18655 PF01740 STAS domain CTI08_RS18660 PF00582 Universal stress protein family CTI08_RS18680 PF00665 Integrase core domain CTI08_RS18690 PF01078 Magnesium chelatase, subunit ChlI CTI08_RS18690 PF13335 Magnesium chelatase, subunit ChlI C-terminal CTI08_RS18695 PF00155 Aminotransferase class I and II CTI08_RS18695 PF00392 Bacterial regulatory proteins, gntR family CTI08_RS18705 PF00701 Dihydrodipicolinate synthetase family CTI08_RS18715 PF03573 outer membrane porin, OprD family CTI08_RS18720 PF00719 Inorganic pyrophosphatase CTI08_RS18735 PF13193 AMP-binding enzyme C-terminal domain CTI08_RS18735 PF00501 AMP-binding enzyme CTI08_RS18740 PF00521 DNA gyrase/topoisomerase IV, subunit A CTI08_RS18740 PF03989 DNA gyrase C-terminal domain, beta-propeller CTI08_RS18745 PF07690 Major Facilitator Superfamily CTI08_RS18750 PF03458 UPF0126 domain CTI08_RS18755 PF02810 SEC-C motif CTI08_RS18760 PF03471 Transporter associated domain CTI08_RS18760 PF03741 Integral membrane protein TerC family CTI08_RS18765 PF03641 Possible lysine decarboxylase CTI08_RS18770 PF07690 Major Facilitator Superfamily CTI08_RS18780 PF11798 IMS family HHH motif CTI08_RS18780 PF11799 impB/mucB/samB family C-terminal domain CTI08_RS18780 PF00817 impB/mucB/samB family CTI08_RS18795 PF08497 Radical SAM N-terminal CTI08_RS18795 PF04055 Radical SAM superfamily CTI08_RS18795 PF11842 Domain of unknown function (DUF3362) CTI08_RS18815 PF03358 NADPH-dependent FMN reductase CTI08_RS18825 PF00291 Pyridoxal-phosphate dependent enzyme CTI08_RS18860 PF00440 Bacterial regulatory proteins, tetR family CTI08_RS18885 PF01327 Polypeptide deformylase CTI08_RS18895 PF17782 DprA winged helix domain CTI08_RS18895 PF02481 DNA recombination-mediator protein A CTI08_RS18900 PF01300 Telomere recombination CTI08_RS18905 PF00892 EamA-like transporter family CTI08_RS18910 PF00440 Bacterial regulatory proteins, tetR family CTI08_RS18915 PF07690 Major Facilitator Superfamily CTI08_RS18925 PF00255 Glutathione peroxidase CTI08_RS18935 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CTI08_RS18940 PF02874 ATP synthase alpha/beta family, beta-barrel domain CTI08_RS18940 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CTI08_RS18945 PF00231 ATP synthase CTI08_RS18950 PF02874 ATP synthase alpha/beta family, beta-barrel domain CTI08_RS18950 PF00306 ATP synthase alpha/beta chain, C terminal domain CTI08_RS18950 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CTI08_RS18955 PF00213 ATP synthase delta (OSCP) subunit CTI08_RS18960 PF00430 ATP synthase B/B' CF(0) CTI08_RS18965 PF00137 ATP synthase subunit C CTI08_RS18970 PF00119 ATP synthase A chain CTI08_RS18990 PF00005 ABC transporter CTI08_RS18995 PF00950 ABC 3 transport family CTI08_RS19000 PF01810 LysE type translocator CTI08_RS19005 PF04261 Dyp-type peroxidase family CTI08_RS19015 PF03949 Malic enzyme, NAD binding domain CTI08_RS19015 PF00390 Malic enzyme, N-terminal domain CTI08_RS19020 PF03485 Arginyl tRNA synthetase N terminal domain CTI08_RS19020 PF05746 DALR anticodon binding domain CTI08_RS19020 PF00750 tRNA synthetases class I (R) CTI08_RS19040 PF02678 Pirin CTI08_RS19040 PF05726 Pirin C-terminal cupin domain CTI08_RS19050 PF03551 Transcriptional regulator PadR-like family CTI08_RS19055 PF01909 Nucleotidyltransferase domain CTI08_RS19055 PF13427 Domain of unknown function (DUF4111) CTI08_RS19060 PF02540 NAD synthase CTI08_RS19060 PF00958 GMP synthase C terminal domain CTI08_RS19060 PF00117 Glutamine amidotransferase class-I CTI08_RS19065 PF04286 Protein of unknown function (DUF445) CTI08_RS19070 PF07681 DoxX CTI08_RS19075 PF09335 SNARE associated Golgi protein CTI08_RS19090 PF13614 AAA domain CTI08_RS19100 PF01722 BolA-like protein CTI08_RS19115 PF01648 4'-phosphopantetheinyl transferase superfamily CTI08_RS19120 PF12697 Alpha/beta hydrolase family CTI08_RS19135 PF00501 AMP-binding enzyme CTI08_RS19135 PF00668 Condensation domain CTI08_RS19135 PF13193 AMP-binding enzyme C-terminal domain CTI08_RS19135 PF00550 Phosphopantetheine attachment site CTI08_RS19135 PF00975 Thioesterase domain CTI08_RS19140 PF14765 Polyketide synthase dehydratase CTI08_RS19140 PF00109 Beta-ketoacyl synthase, N-terminal domain CTI08_RS19140 PF16197 Ketoacyl-synthetase C-terminal extension CTI08_RS19140 PF08242 Methyltransferase domain CTI08_RS19140 PF00975 Thioesterase domain CTI08_RS19140 PF00550 Phosphopantetheine attachment site CTI08_RS19140 PF02801 Beta-ketoacyl synthase, C-terminal domain CTI08_RS19145 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CTI08_RS19145 PF02770 Acyl-CoA dehydrogenase, middle domain CTI08_RS19145 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CTI08_RS19150 PF00501 AMP-binding enzyme CTI08_RS19155 PF00196 Bacterial regulatory proteins, luxR family CTI08_RS19155 PF03472 Autoinducer binding domain CTI08_RS19165 PF00765 Autoinducer synthase CTI08_RS19170 PF00083 Sugar (and other) transporter CTI08_RS19170 PF07690 Major Facilitator Superfamily CTI08_RS19175 PF00378 Enoyl-CoA hydratase/isomerase CTI08_RS19180 PF00378 Enoyl-CoA hydratase/isomerase CTI08_RS19185 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CTI08_RS19185 PF02770 Acyl-CoA dehydrogenase, middle domain CTI08_RS19185 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CTI08_RS19190 PF13193 AMP-binding enzyme C-terminal domain CTI08_RS19190 PF00501 AMP-binding enzyme CTI08_RS19195 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CTI08_RS19195 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CTI08_RS19200 PF00171 Aldehyde dehydrogenase family CTI08_RS19210 PF00324 Amino acid permease CTI08_RS19215 PF00324 Amino acid permease CTI08_RS19220 PF01042 Endoribonuclease L-PSP CTI08_RS19225 PF00842 Alanine racemase, C-terminal domain CTI08_RS19225 PF01168 Alanine racemase, N-terminal domain CTI08_RS19230 PF01266 FAD dependent oxidoreductase CTI08_RS19235 PF01037 Lrp/AsnC ligand binding domain CTI08_RS19245 PF07715 TonB-dependent Receptor Plug Domain CTI08_RS19245 PF00593 TonB dependent receptor CTI08_RS19260 PF00849 RNA pseudouridylate synthase CTI08_RS19275 PF00109 Beta-ketoacyl synthase, N-terminal domain CTI08_RS19275 PF02801 Beta-ketoacyl synthase, C-terminal domain CTI08_RS19290 PF00293 NUDIX domain CTI08_RS19310 PF00694 Aconitase C-terminal domain CTI08_RS19310 PF00330 Aconitase family (aconitate hydratase) CTI08_RS19315 PF00285 Citrate synthase, C-terminal domain CTI08_RS19325 PF00392 Bacterial regulatory proteins, gntR family CTI08_RS19325 PF07729 FCD domain CTI08_RS19335 PF00155 Aminotransferase class I and II CTI08_RS19340 PF09330 D-lactate dehydrogenase, membrane binding CTI08_RS19340 PF01565 FAD binding domain CTI08_RS19345 PF01070 FMN-dependent dehydrogenase CTI08_RS19350 PF07729 FCD domain CTI08_RS19350 PF00392 Bacterial regulatory proteins, gntR family CTI08_RS19355 PF02652 L-lactate permease CTI08_RS19360 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CTI08_RS19360 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CTI08_RS19360 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CTI08_RS19360 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CTI08_RS19365 PF16363 GDP-mannose 4,6 dehydratase CTI08_RS19370 PF00342 Phosphoglucose isomerase CTI08_RS19375 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CTI08_RS19375 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CTI08_RS19375 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CTI08_RS19380 PF00483 Nucleotidyl transferase CTI08_RS19385 PF02397 Bacterial sugar transferase CTI08_RS19390 PF00535 Glycosyl transferase family 2 CTI08_RS19395 PF00534 Glycosyl transferases group 1 CTI08_RS19410 PF00534 Glycosyl transferases group 1 CTI08_RS19410 PF13439 Glycosyltransferase Family 4 CTI08_RS19415 PF12464 Maltose acetyltransferase CTI08_RS19415 PF14602 Hexapeptide repeat of succinyl-transferase CTI08_RS19415 PF00132 Bacterial transferase hexapeptide (six repeats) CTI08_RS19425 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CTI08_RS19430 PF00132 Bacterial transferase hexapeptide (six repeats) CTI08_RS19435 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CTI08_RS19435 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CTI08_RS19445 PF18412 Outer-membrane lipoprotein Wza C-terminal domain CTI08_RS19445 PF10531 SLBB domain CTI08_RS19445 PF02563 Polysaccharide biosynthesis/export protein CTI08_RS19450 PF01451 Low molecular weight phosphotyrosine protein phosphatase CTI08_RS19455 PF13807 G-rich domain on putative tyrosine kinase CTI08_RS19455 PF13614 AAA domain CTI08_RS19455 PF02706 Chain length determinant protein CTI08_RS19460 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CTI08_RS19460 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CTI08_RS19465 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CTI08_RS19465 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CTI08_RS19470 PF03023 Lipid II flippase MurJ CTI08_RS19475 PF01510 N-acetylmuramoyl-L-alanine amidase CTI08_RS19480 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CTI08_RS19480 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CTI08_RS19490 PF05506 Domain of unknown function (DUF756) CTI08_RS19490 PF04185 Phosphoesterase family CTI08_RS19500 PF03725 3' exoribonuclease family, domain 2 CTI08_RS19500 PF01138 3' exoribonuclease family, domain 1 CTI08_RS19505 PF00487 Fatty acid desaturase CTI08_RS19510 PF00175 Oxidoreductase NAD-binding domain CTI08_RS19515 PF00440 Bacterial regulatory proteins, tetR family CTI08_RS19520 PF00440 Bacterial regulatory proteins, tetR family CTI08_RS19520 PF08360 QacR-like protein, C-terminal region CTI08_RS19525 PF01323 DSBA-like thioredoxin domain CTI08_RS19535 PF13419 Haloacid dehalogenase-like hydrolase CTI08_RS19540 PF00106 short chain dehydrogenase CTI08_RS19555 PF00583 Acetyltransferase (GNAT) family CTI08_RS19555 PF00696 Amino acid kinase family CTI08_RS19560 PF09084 NMT1/THI5 like CTI08_RS19565 PF09084 NMT1/THI5 like CTI08_RS19570 PF00296 Luciferase-like monooxygenase CTI08_RS19575 PF00528 Binding-protein-dependent transport system inner membrane component CTI08_RS19580 PF00005 ABC transporter CTI08_RS19585 PF00440 Bacterial regulatory proteins, tetR family CTI08_RS19585 PF08362 YcdC-like protein, C-terminal region CTI08_RS19590 PF01048 Phosphorylase superfamily CTI08_RS19600 PF01687 Riboflavin kinase CTI08_RS19600 PF06574 FAD synthetase CTI08_RS19605 PF06827 Zinc finger found in FPG and IleRS CTI08_RS19605 PF00133 tRNA synthetases class I (I, L, M and V) CTI08_RS19605 PF08264 Anticodon-binding domain of tRNA CTI08_RS19610 PF01252 Signal peptidase (SPase) II CTI08_RS19615 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CTI08_RS19655 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CTI08_RS19660 PF07859 alpha/beta hydrolase fold CTI08_RS19690 PF01025 GrpE CTI08_RS19695 PF00012 Hsp70 protein CTI08_RS19715 PF13406 Transglycosylase SLT domain CTI08_RS19720 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CTI08_RS19720 PF02222 ATP-grasp domain CTI08_RS19725 PF00731 AIR carboxylase CTI08_RS19740 PF01225 Mur ligase family, catalytic domain CTI08_RS19740 PF02875 Mur ligase family, glutamate ligase domain CTI08_RS19740 PF08245 Mur ligase middle domain CTI08_RS19750 PF01569 PAP2 superfamily CTI08_RS19755 PF03741 Integral membrane protein TerC family CTI08_RS19770 PF03738 Glutathionylspermidine synthase preATP-grasp CTI08_RS19775 PF00355 Rieske [2Fe-2S] domain CTI08_RS19780 PF01979 Amidohydrolase family CTI08_RS19785 PF00156 Phosphoribosyl transferase domain CTI08_RS19795 PF13098 Thioredoxin-like domain CTI08_RS19795 PF10411 Disulfide bond isomerase protein N-terminus CTI08_RS19800 PF16916 Dimerisation domain of Zinc Transporter CTI08_RS19800 PF01545 Cation efflux family CTI08_RS19805 PF02583 Metal-sensitive transcriptional repressor CTI08_RS19810 PF01926 50S ribosome-binding GTPase CTI08_RS19810 PF10396 GTP-binding protein TrmE N-terminus CTI08_RS19810 PF12631 MnmE helical domain CTI08_RS19815 PF14849 YidC periplasmic domain CTI08_RS19815 PF02096 60Kd inner membrane protein CTI08_RS19820 PF01809 Putative membrane protein insertion efficiency factor CTI08_RS19825 PF00825 Ribonuclease P CTI08_RS19830 PF00468 Ribosomal protein L34 CTI08_RS19835 PF01051 Initiator Replication protein CTI08_RS19865 PF00593 TonB dependent receptor CTI08_RS19865 PF07715 TonB-dependent Receptor Plug Domain CTI08_RS19885 PF02796 Helix-turn-helix domain of resolvase CTI08_RS19885 PF00239 Resolvase, N terminal domain CTI08_RS19890 PF01126 Heme oxygenase CTI08_RS19895 PF07715 TonB-dependent Receptor Plug Domain CTI08_RS19895 PF00593 TonB dependent receptor CTI08_RS19900 PF04304 Protein of unknown function (DUF454) CTI08_RS19965 PF00565 Staphylococcal nuclease homologue CTI08_RS19970 PF00816 H-NS histone family CTI08_RS20035 PF13614 AAA domain CTI08_RS20040 PF02195 ParB-like nuclease domain CTI08_RS20040 PF17762 HTH domain found in ParB protein CTI08_RS20060 PF05816 Toxic anion resistance protein (TelA) CTI08_RS20125 PF00905 Penicillin binding protein transpeptidase domain CTI08_RS20190 PF00684 DnaJ central domain CTI08_RS20190 PF01556 DnaJ C terminal domain CTI08_RS20190 PF00226 DnaJ domain CTI08_RS20225 PF18272 single-stranded DNA binding TraI N-terminal subdomain CTI08_RS20225 PF08751 TrwC relaxase CTI08_RS20225 PF07057 DNA helicase TraI CTI08_RS20225 PF18340 DNA relaxase TraI 2B/2B-like domain CTI08_RS20245 PF13936 Helix-turn-helix domain CTI08_RS20245 PF00665 Integrase core domain CTI08_RS20260 PF13936 Helix-turn-helix domain CTI08_RS20260 PF00665 Integrase core domain CTI08_RS20265 PF01636 Phosphotransferase enzyme family CTI08_RS20270 PF13936 Helix-turn-helix domain CTI08_RS20270 PF00665 Integrase core domain CTI08_RS20285 PF02796 Helix-turn-helix domain of resolvase CTI08_RS20285 PF00239 Resolvase, N terminal domain CTI08_RS20300 PF01464 Transglycosylase SLT domain CTI08_RS20335 PF10411 Disulfide bond isomerase protein N-terminus CTI08_RS20335 PF13098 Thioredoxin-like domain CTI08_RS20370 PF06834 TraU protein CTI08_RS20380 PF06986 Type-1V conjugative transfer system mating pair stabilisation CTI08_RS20395 PF06122 Conjugative relaxosome accessory transposon protein CTI08_RS20415 PF11798 IMS family HHH motif CTI08_RS20415 PF13438 Domain of unknown function (DUF4113) CTI08_RS20415 PF11799 impB/mucB/samB family C-terminal domain CTI08_RS20415 PF00817 impB/mucB/samB family