locus-tag	class	description
OQH41_RS00010	COG0592	DNA-directed DNA polymerase activity
OQH41_RS00020	COG0187	DNA topoisomerase II activity
OQH41_RS00030	COG0586	Pfam SNARE associated Golgi protein
OQH41_RS00035	COG0488	(ABC) transporter
OQH41_RS00060	COG0596	Alpha beta hydrolase
OQH41_RS00065	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
OQH41_RS00070	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
OQH41_RS00100	COG1047	Peptidyl-prolyl cis-trans
OQH41_RS00110	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
OQH41_RS00115	COG0196	riboflavin kinase activity
OQH41_RS00125	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
OQH41_RS00130	COG1309	transcriptional regulator
OQH41_RS00135	COG1116	anion transmembrane transporter activity
OQH41_RS00140	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
OQH41_RS00145	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
OQH41_RS00150	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
OQH41_RS00155	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
OQH41_RS00175	COG1028	Short-chain dehydrogenase reductase Sdr
OQH41_RS00180	COG0546	phosphoglycolate phosphatase activity
OQH41_RS00240	COG3023	N-Acetylmuramoyl-L-alanine amidase
OQH41_RS00245	COG0728	peptidoglycan biosynthetic process
OQH41_RS00270	COG1596	polysaccharide export
OQH41_RS00275	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
OQH41_RS00285	COG1215	transferase activity, transferring glycosyl groups
OQH41_RS00290	COG0438	transferase activity, transferring glycosyl groups
OQH41_RS00310	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
OQH41_RS00315	COG1210	Utp--glucose-1-phosphate uridylyltransferase
OQH41_RS00330	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
OQH41_RS00340	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
OQH41_RS00350	COG2186	Transcriptional regulator
OQH41_RS00360	COG0277	FAD linked oxidase domain protein
OQH41_RS00365	COG1448	Aminotransferase
OQH41_RS00375	COG1802	Transcriptional regulator
OQH41_RS00390	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
OQH41_RS00420	COG0564	pseudouridine synthase activity
OQH41_RS00460	COG0251	oxidation-reduction process
OQH41_RS00465	COG1113	amino acid transport
OQH41_RS00470	COG1113	amino acid transport
OQH41_RS00490	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
OQH41_RS00495	COG1960	acyl-CoA dehydrogenase activity
OQH41_RS00500	COG1024	Enoyl-CoA hydratase
OQH41_RS00505	COG1024	Enoyl-CoA hydratase
OQH41_RS00510	COG0477	Major facilitator Superfamily
OQH41_RS00515	COG3916	Acyl-homoserine-lactone synthase
OQH41_RS00525	COG2197	response regulator
OQH41_RS00535	COG1960	acyl-CoA dehydrogenase activity
OQH41_RS00540	COG3321	synthase
OQH41_RS00540	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
OQH41_RS00540	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
OQH41_RS00540	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
OQH41_RS00580	COG0271	Belongs to the BolA IbaG family
OQH41_RS00590	COG1192	Involved in chromosome partitioning
OQH41_RS00605	COG0586	Pfam SNARE associated Golgi protein
OQH41_RS00610	COG2259	Doxx family
OQH41_RS00615	COG4399	Belongs to the UPF0754 family
OQH41_RS00620	COG0519	Catalyzes the synthesis of GMP from XMP
OQH41_RS00620	COG0518	GMP synthase (glutamine-hydrolyzing) activity
OQH41_RS00665	COG0281	malic enzyme
OQH41_RS00670	COG2837	iron assimilation
OQH41_RS00675	COG1280	lysine exporter protein (LysE YggA)
OQH41_RS00680	COG1108	ABC-type Mn2 Zn2 transport systems permease components
OQH41_RS00685	COG1121	(ABC) transporter
OQH41_RS00750	COG0386	Belongs to the glutathione peroxidase family
OQH41_RS00765	COG1309	transcriptional regulator
OQH41_RS00770	COG0697	spore germination
OQH41_RS00780	COG0758	DNA mediated transformation
OQH41_RS00850	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
OQH41_RS00860	COG0655	NAD(P)H dehydrogenase (quinone) activity
OQH41_RS00900	COG4452	Inner membrane protein CreD
OQH41_RS00905	COG2205	protein histidine kinase activity
OQH41_RS00910	COG0745	RESPONSE REGULATOR receiver
OQH41_RS00920	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
OQH41_RS00930	COG0477	Major facilitator Superfamily
OQH41_RS00940	COG1253	flavin adenine dinucleotide binding
OQH41_RS00950	COG2860	membrane
OQH41_RS00955	COG0477	Major facilitator Superfamily
OQH41_RS00965	COG0318	PFAM AMP-dependent synthetase and ligase
OQH41_RS00980	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
OQH41_RS01000	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
OQH41_RS01075	COG0789	Transcriptional regulator
OQH41_RS01085	COG0640	Transcriptional regulator
OQH41_RS01090	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
OQH41_RS01135	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
OQH41_RS01170	COG0347	Belongs to the P(II) protein family
OQH41_RS01175	COG0004	ammonium transporteR
OQH41_RS01185	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
OQH41_RS01185	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
OQH41_RS01225	COG0795	lipopolysaccharide-transporting ATPase activity
OQH41_RS01230	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
OQH41_RS01235	COG0793	Belongs to the peptidase S41A family
OQH41_RS01250	COG2197	response regulator
OQH41_RS01260	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
OQH41_RS01270	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
OQH41_RS01275	COG4974	Belongs to the 'phage' integrase family
OQH41_RS01300	COG0772	Belongs to the SEDS family
OQH41_RS01305	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
OQH41_RS01310	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
OQH41_RS01315	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
OQH41_RS01340	COG0697	spore germination
OQH41_RS01345	COG1538	Outer membrane efflux protein
OQH41_RS01365	COG3275	phosphorelay sensor kinase activity
OQH41_RS01375	COG0181	hydroxymethylbilane synthase activity
OQH41_RS01420	COG1716	ATPase activity
OQH41_RS01425	COG0546	phosphoglycolate phosphatase activity
OQH41_RS01520	COG0596	Alpha beta hydrolase
OQH41_RS01525	COG2056	Na+-H+ antiporter family
OQH41_RS01540	COG0326	Molecular chaperone. Has ATPase activity
OQH41_RS01555	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
OQH41_RS01625	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
OQH41_RS01660	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
OQH41_RS01670	COG0497	DNA recombination
OQH41_RS01685	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
OQH41_RS01695	COG0237	dephospho-CoA kinase activity
OQH41_RS01745	COG0195	Participates in both transcription termination and antitermination
OQH41_RS01760	COG1320	monovalent cation:proton antiporter activity
OQH41_RS01765	COG2212	antiporter activity
OQH41_RS01770	COG1863	multisubunit Na H antiporter MnhE subunit
OQH41_RS01775	COG0651	ATP synthesis coupled electron transport
OQH41_RS01780	COG1006	Multisubunit Na H antiporter MnhC subunit
OQH41_RS01785	COG2111	Na H antiporter
OQH41_RS01785	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
OQH41_RS01800	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
OQH41_RS01830	COG2226	methyltransferase
OQH41_RS01850	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
OQH41_RS01855	COG1074	ATP-dependent DNA helicase activity
OQH41_RS01860	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
OQH41_RS01865	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
OQH41_RS01880	COG0598	Magnesium transport protein CorA
OQH41_RS01885	COG0789	Transcriptional regulator
OQH41_RS01890	COG0484	heat shock protein binding
OQH41_RS01905	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
OQH41_RS01905	COG0475	glutathione-regulated potassium exporter activity
OQH41_RS01910	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
OQH41_RS01930	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
OQH41_RS01940	COG4535	Mg2 and Co2 transporter CorC
OQH41_RS01945	COG0425	Belongs to the sulfur carrier protein TusA family
OQH41_RS01955	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
OQH41_RS01955	COG0644	oxidoreductase
OQH41_RS01965	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
OQH41_RS01980	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
OQH41_RS01985	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
OQH41_RS01995	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
OQH41_RS01995	COG0493	'glutamate synthase
OQH41_RS02020	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
OQH41_RS02035	COG0534	Mate efflux family protein
OQH41_RS02045	COG0635	Involved in the biosynthesis of porphyrin-containing compound
OQH41_RS02050	COG1028	Short-chain dehydrogenase reductase Sdr
OQH41_RS02055	COG0583	DNA-binding transcription factor activity
OQH41_RS02070	COG0318	PFAM AMP-dependent synthetase and ligase
OQH41_RS02075	COG1530	ribonuclease E activity
OQH41_RS02085	COG0546	phosphoglycolate phosphatase activity
OQH41_RS02090	COG2378	regulation of single-species biofilm formation
OQH41_RS02095	COG0625	glutathione transferase activity
OQH41_RS02105	COG0583	DNA-binding transcription factor activity
OQH41_RS02170	COG0473	3-isopropylmalate dehydrogenase activity
OQH41_RS02225	COG1301	dicarboxylic acid transport
OQH41_RS02235	COG1560	Kdo2-lipid A biosynthetic process
OQH41_RS02240	COG1280	lysine exporter protein (LysE YggA)
OQH41_RS02250	COG0488	(ABC) transporter
OQH41_RS02255	COG2900	Belongs to the SlyX family
OQH41_RS02265	COG1733	regulation of RNA biosynthetic process
OQH41_RS02290	COG0210	DNA helicase
OQH41_RS02295	COG0724	RNA recognition motif
OQH41_RS02315	COG4651	solute:proton antiporter activity
OQH41_RS02315	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
OQH41_RS02340	COG0788	formyltetrahydrofolate deformylase activity
OQH41_RS02440	COG2813	Specifically methylates the guanine in position
OQH41_RS02440	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
OQH41_RS02450	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
OQH41_RS02460	COG4774	siderophore transport
OQH41_RS02470	COG0740	serine-type endopeptidase activity
OQH41_RS02490	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
OQH41_RS02490	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
OQH41_RS02495	COG0857	belongs to the CobB CobQ family
OQH41_RS02495	COG0280	phosphate acetyltransferase
OQH41_RS02500	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
OQH41_RS02510	COG0800	Aldolase
OQH41_RS02520	COG3265	gluconokinase activity
OQH41_RS02525	COG1012	belongs to the aldehyde dehydrogenase family
OQH41_RS02535	COG2267	carboxylic ester hydrolase activity
OQH41_RS02550	COG0793	Belongs to the peptidase S41A family
OQH41_RS02585	COG1426	Protein conserved in bacteria
OQH41_RS02605	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
OQH41_RS02625	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
OQH41_RS02635	COG1162	GTPase activity
OQH41_RS02640	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
OQH41_RS02655	COG1538	Outer membrane efflux protein
OQH41_RS02660	COG0577	efflux transmembrane transporter activity
OQH41_RS02660	COG1136	(ABC) transporter
OQH41_RS02665	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
OQH41_RS02690	COG0028	Belongs to the TPP enzyme family
OQH41_RS02695	COG0440	acetolactate synthase activity
OQH41_RS02735	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
OQH41_RS02750	COG0084	hydrolase, TatD family'
OQH41_RS02765	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
OQH41_RS02775	COG0583	DNA-binding transcription factor activity
OQH41_RS02785	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
OQH41_RS02810	COG4372	Transposase
OQH41_RS02890	COG2205	protein histidine kinase activity
OQH41_RS02905	COG2132	Multicopper oxidase
OQH41_RS02930	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
OQH41_RS02965	COG0640	Transcriptional regulator
OQH41_RS02975	COG0798	PFAM Bile acid sodium symporter
OQH41_RS02980	COG0431	NADPH-dependent FMN reductase
OQH41_RS02985	COG0492	ferredoxin-NADP+ reductase activity
OQH41_RS02990	COG2072	flavoprotein involved in K transport
OQH41_RS03025	COG1358	cellular component organization or biogenesis
OQH41_RS03070	COG2814	Major facilitator Superfamily
OQH41_RS03080	COG0697	spore germination
OQH41_RS03110	COG3622	Belongs to the hyi family
OQH41_RS03115	COG2084	Dehydrogenase
OQH41_RS03120	COG1024	Enoyl-CoA hydratase
OQH41_RS03125	COG5002	protein histidine kinase activity
OQH41_RS03125	COG0784	Response regulator, receiver
OQH41_RS03125	COG2205	protein histidine kinase activity
OQH41_RS03145	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
OQH41_RS03155	COG3956	TIGRFAM MazG family protein
OQH41_RS03160	COG1555	photosystem II stabilization
OQH41_RS03165	COG0617	tRNA 3'-terminal CCA addition
OQH41_RS03170	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
OQH41_RS03190	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
OQH41_RS03195	COG3028	Belongs to the UPF0307 family
OQH41_RS03200	COG0318	PFAM AMP-dependent synthetase and ligase
OQH41_RS03215	COG0625	glutathione transferase activity
OQH41_RS03220	COG1238	metal cluster binding
OQH41_RS03265	COG0072	phenylalanine-tRNA ligase activity
OQH41_RS03295	COG0248	Ppx GppA phosphatase
OQH41_RS03305	COG0037	tRNA processing
OQH41_RS03345	COG1764	response to oxidative stress
OQH41_RS03350	COG1846	Transcriptional regulator
OQH41_RS03360	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
OQH41_RS03420	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
OQH41_RS03425	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
OQH41_RS03430	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
OQH41_RS03490	COG1214	PFAM Peptidase M22, glycoprotease
OQH41_RS03505	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
OQH41_RS03515	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
OQH41_RS03520	COG0561	phosphatase activity
OQH41_RS03530	COG2132	Multicopper oxidase
OQH41_RS03535	COG3667	copper resistance
OQH41_RS03550	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
OQH41_RS03555	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
OQH41_RS03560	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
OQH41_RS03590	COG1598	PFAM Uncharacterised protein family UPF0150
OQH41_RS03595	COG1724	mRNA binding
OQH41_RS03605	COG4695	Portal protein
OQH41_RS03685	COG5301	cellulose 1,4-beta-cellobiosidase activity
OQH41_RS03805	COG0629	single-stranded DNA binding
OQH41_RS03815	COG0582	viral genome integration into host DNA
OQH41_RS03830	COG1063	alcohol dehydrogenase
OQH41_RS03835	COG0583	DNA-binding transcription factor activity
OQH41_RS03840	COG1960	acyl-CoA dehydrogenase activity
OQH41_RS03845	COG2814	Major facilitator Superfamily
OQH41_RS03850	COG1804	L-carnitine dehydratase bile acid-inducible protein F
OQH41_RS03855	COG1309	transcriptional regulator
OQH41_RS03870	COG1053	succinate dehydrogenase
OQH41_RS03875	COG0583	DNA-binding transcription factor activity
OQH41_RS03890	COG0583	DNA-binding transcription factor activity
OQH41_RS03920	COG0583	DNA-binding transcription factor activity
OQH41_RS03935	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
OQH41_RS04000	COG0384	phenazine biosynthesis protein PhzF
OQH41_RS04015	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
OQH41_RS04035	COG0745	RESPONSE REGULATOR receiver
OQH41_RS04075	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
OQH41_RS04105	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
OQH41_RS04110	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
OQH41_RS04130	COG0583	DNA-binding transcription factor activity
OQH41_RS04150	COG0668	transmembrane transport
OQH41_RS04160	COG2081	HI0933 family
OQH41_RS04165	COG2515	1-aminocyclopropane-1-carboxylate deaminase
OQH41_RS04195	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
OQH41_RS04195	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
OQH41_RS04205	COG0489	protein tyrosine kinase activity
OQH41_RS04255	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
OQH41_RS04265	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
OQH41_RS04280	COG0730	response to heat
OQH41_RS04290	COG1196	nuclear chromosome segregation
OQH41_RS04310	COG2223	nitrite transmembrane transporter activity
OQH41_RS04315	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
OQH41_RS04320	COG1877	trehalose-phosphatase activity
OQH41_RS04325	COG0596	Alpha beta hydrolase
OQH41_RS04325	COG2226	methyltransferase
OQH41_RS04325	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
OQH41_RS04340	COG4106	trans-aconitate 2-methyltransferase activity
OQH41_RS04355	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
OQH41_RS04360	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
OQH41_RS04365	COG0009	L-threonylcarbamoyladenylate synthase
OQH41_RS04370	COG3101	peptidyl-lysine hydroxylation
OQH41_RS04375	COG1399	metal-binding, possibly nucleic acid-binding protein
OQH41_RS04400	COG1652	LysM domain
OQH41_RS04405	COG0351	phosphomethylpyrimidine kinase
OQH41_RS04405	COG0352	thiamine-phosphate diphosphorylase activity
OQH41_RS04405	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
OQH41_RS04415	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
OQH41_RS04445	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
OQH41_RS04475	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
OQH41_RS04490	COG0358	DNA primase activity
OQH41_RS04500	COG0564	pseudouridine synthase activity
OQH41_RS04525	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
OQH41_RS04545	COG0583	DNA-binding transcription factor activity
OQH41_RS04550	COG0473	3-isopropylmalate dehydrogenase activity
OQH41_RS04560	COG0657	acetylesterase activity
OQH41_RS04570	COG1012	belongs to the aldehyde dehydrogenase family
OQH41_RS04590	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
OQH41_RS04590	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
OQH41_RS04605	COG1981	membrane
OQH41_RS04650	COG0456	acetyltransferase
OQH41_RS04660	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
OQH41_RS04665	COG0492	ferredoxin-NADP+ reductase activity
OQH41_RS04670	COG1674	ftsk spoiiie
OQH41_RS04670	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
OQH41_RS04675	COG1280	lysine exporter protein (LysE YggA)
OQH41_RS04690	COG2894	cell division
OQH41_RS04705	COG0204	Acyl-transferase
OQH41_RS04710	COG2885	chlorophyll binding
OQH41_RS04715	COG0210	DNA helicase
OQH41_RS04725	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
OQH41_RS04740	COG0121	glutamine amidotransferase
OQH41_RS04760	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
OQH41_RS04765	COG0735	belongs to the Fur family
OQH41_RS04790	COG0420	3'-5' exonuclease activity
OQH41_RS04810	COG1090	epimerase
OQH41_RS04825	COG2050	protein possibly involved in aromatic compounds catabolism
OQH41_RS04835	COG2814	Major facilitator Superfamily
OQH41_RS04840	COG0405	Gamma-glutamyltransferase
OQH41_RS04850	COG0582	viral genome integration into host DNA
OQH41_RS04905	COG4626	Terminase
OQH41_RS04905	COG1802	Transcriptional regulator
OQH41_RS04955	COG1396	sequence-specific DNA binding
OQH41_RS04980	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
OQH41_RS05005	COG0531	amino acid
OQH41_RS05010	COG2040	homocysteine
OQH41_RS05035	COG1309	transcriptional regulator
OQH41_RS05040	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
OQH41_RS05045	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
OQH41_RS05055	COG1607	acyl-coa hydrolase
OQH41_RS05065	COG0523	cobalamin synthesis protein
OQH41_RS05075	COG4681	YaeQ
OQH41_RS05085	COG0726	polysaccharide deacetylase
OQH41_RS05085	COG1649	PFAM Uncharacterised BCR, COG1649
OQH41_RS05090	COG1215	transferase activity, transferring glycosyl groups
OQH41_RS05100	COG1024	Enoyl-CoA hydratase
OQH41_RS05115	COG1414	Transcriptional regulator
OQH41_RS05135	COG1028	Short-chain dehydrogenase reductase Sdr
OQH41_RS05145	COG0446	pyridine nucleotide-disulphide oxidoreductase
OQH41_RS05150	COG2271	Major facilitator Superfamily
OQH41_RS05160	COG2267	carboxylic ester hydrolase activity
OQH41_RS05165	COG1028	Short-chain dehydrogenase reductase Sdr
OQH41_RS05180	COG0028	Belongs to the TPP enzyme family
OQH41_RS05190	COG0477	Major facilitator Superfamily
OQH41_RS05195	COG0242	peptide deformylase activity
OQH41_RS05200	COG2066	Belongs to the glutaminase family
OQH41_RS05205	COG2207	Transcriptional regulator
OQH41_RS05210	COG2223	nitrite transmembrane transporter activity
OQH41_RS05225	COG0583	DNA-binding transcription factor activity
OQH41_RS05230	COG1028	Short-chain dehydrogenase reductase Sdr
OQH41_RS05235	COG2271	Major facilitator Superfamily
OQH41_RS05240	COG3959	Transketolase, thiamine diphosphate binding domain
OQH41_RS05245	COG3958	Transketolase
OQH41_RS05285	COG0306	phosphate transporter
OQH41_RS05305	COG1262	PFAM Formylglycine-generating sulfatase enzyme
OQH41_RS05325	COG4771	TonB-dependent receptor
OQH41_RS05350	COG4181	ATPase activity
OQH41_RS05355	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
OQH41_RS05385	COG0583	DNA-binding transcription factor activity
OQH41_RS05395	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
OQH41_RS05400	COG1773	rubredoxin
OQH41_RS05450	COG2851	Citrate transporter
OQH41_RS05455	COG1253	flavin adenine dinucleotide binding
OQH41_RS05495	COG0804	urea catabolic process
OQH41_RS05505	COG0830	nickel cation binding
OQH41_RS05520	COG0742	ribosomal rna small subunit methyltransferase
OQH41_RS05525	COG0768	penicillin binding
OQH41_RS05550	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
OQH41_RS05555	COG2878	Part of a membrane complex involved in electron transport
OQH41_RS05560	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
OQH41_RS05570	COG3384	dioxygenase
OQH41_RS05605	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
OQH41_RS05645	COG0006	proline dipeptidase activity
OQH41_RS05650	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
OQH41_RS05655	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
OQH41_RS05675	COG1279	arginine transmembrane transporter activity
OQH41_RS05680	COG0583	DNA-binding transcription factor activity
OQH41_RS05720	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
OQH41_RS05725	COG0741	lytic transglycosylase activity
OQH41_RS05725	COG1388	LysM domain
OQH41_RS05725	COG0741	lytic transglycosylase activity
OQH41_RS05725	COG1388	LysM domain
OQH41_RS05735	COG4174	ABC transporter (Permease)
OQH41_RS05740	COG4239	(ABC) transporter, permease
OQH41_RS05745	COG4172	Belongs to the ABC transporter superfamily
OQH41_RS05765	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
OQH41_RS05775	COG2203	Gaf domain
OQH41_RS05775	COG3706	GGDEF domain
OQH41_RS05775	COG5001	Diguanylate cyclase
OQH41_RS05775	COG4251	negative regulation of phosphorylation
OQH41_RS05785	COG0446	pyridine nucleotide-disulphide oxidoreductase
OQH41_RS05785	COG1902	pentaerythritol trinitrate reductase activity
OQH41_RS05795	COG0457	Tetratricopeptide repeat
OQH41_RS05805	COG0251	oxidation-reduction process
OQH41_RS05815	COG0583	DNA-binding transcription factor activity
OQH41_RS05830	COG2801	Transposase and inactivated derivatives
OQH41_RS05910	COG3209	COG3209 Rhs family protein
OQH41_RS05970	COG4372	Transposase
OQH41_RS05990	COG1113	amino acid transport
OQH41_RS06000	COG0531	amino acid
OQH41_RS06020	COG1012	belongs to the aldehyde dehydrogenase family
OQH41_RS06040	COG1113	amino acid transport
OQH41_RS06055	COG0697	spore germination
OQH41_RS06060	COG2721	sulfolactate sulfo-lyase activity
OQH41_RS06065	COG2271	Major facilitator Superfamily
OQH41_RS06070	COG4948	Mandelate Racemase Muconate Lactonizing
OQH41_RS06080	COG1012	belongs to the aldehyde dehydrogenase family
OQH41_RS06085	COG2186	Transcriptional regulator
OQH41_RS06110	COG1960	acyl-CoA dehydrogenase activity
OQH41_RS06120	COG1012	belongs to the aldehyde dehydrogenase family
OQH41_RS06125	COG1024	Enoyl-CoA hydratase
OQH41_RS06130	COG2814	Major facilitator Superfamily
OQH41_RS06145	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
OQH41_RS06160	COG1262	PFAM Formylglycine-generating sulfatase enzyme
OQH41_RS06200	COG2207	Transcriptional regulator
OQH41_RS06205	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
OQH41_RS06210	COG2072	flavoprotein involved in K transport
OQH41_RS06215	COG0300	oxidoreductase activity
OQH41_RS06225	COG1309	transcriptional regulator
OQH41_RS06230	COG1741	Belongs to the pirin family
OQH41_RS06245	COG2072	flavoprotein involved in K transport
OQH41_RS06255	COG2252	PERMEase
OQH41_RS06260	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
OQH41_RS06280	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
OQH41_RS06290	COG0527	aspartate kinase activity
OQH41_RS06310	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
OQH41_RS06325	COG0667	Aldo Keto reductase
OQH41_RS06340	COG1765	OsmC-like protein
OQH41_RS06355	COG0542	response to heat
OQH41_RS06390	COG2885	chlorophyll binding
OQH41_RS06400	COG0625	glutathione transferase activity
OQH41_RS06405	COG0220	tRNA (guanine-N7-)-methyltransferase activity
OQH41_RS06425	COG3634	alkyl hydroperoxide reductase activity
OQH41_RS06435	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
OQH41_RS06450	COG1643	Atp-dependent helicase
OQH41_RS06465	COG2814	Major facilitator Superfamily
OQH41_RS06470	COG3135	benzoate transporter
OQH41_RS06475	COG1028	Short-chain dehydrogenase reductase Sdr
OQH41_RS06480	COG0543	2 iron, 2 sulfur cluster binding
OQH41_RS06480	COG0633	Ferredoxin
OQH41_RS06490	COG4638	Rieske (2fe-2S)
OQH41_RS06500	COG0583	DNA-binding transcription factor activity
OQH41_RS06550	COG1570	exodeoxyribonuclease VII activity
OQH41_RS06580	COG1280	lysine exporter protein (LysE YggA)
OQH41_RS06585	COG1278	Cold shock
OQH41_RS06620	COG2814	Major facilitator Superfamily
OQH41_RS06665	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
OQH41_RS06665	COG0517	IMP dehydrogenase activity
OQH41_RS06670	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
OQH41_RS06680	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
OQH41_RS06685	COG1137	ATPase activity
OQH41_RS06690	COG1538	Outer membrane efflux protein
OQH41_RS06720	COG4122	O-methyltransferase activity
OQH41_RS06730	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
OQH41_RS06745	COG1522	sequence-specific DNA binding
OQH41_RS06750	COG5006	permease, DMT superfamily
OQH41_RS06760	COG1560	Kdo2-lipid A biosynthetic process
OQH41_RS06775	COG2814	Major facilitator Superfamily
OQH41_RS06795	COG1250	3-hydroxyacyl-CoA dehydrogenase
OQH41_RS06930	COG0583	DNA-binding transcription factor activity
OQH41_RS06935	COG1914	H( )-stimulated, divalent metal cation uptake system
OQH41_RS06955	COG4770	biotin carboxylase activity
OQH41_RS06960	COG0038	chloride channel
OQH41_RS06965	COG2831	hemolysin activation secretion protein
OQH41_RS06970	COG3210	domain, Protein
OQH41_RS06990	COG2801	Transposase and inactivated derivatives
OQH41_RS07030	COG1804	L-carnitine dehydratase bile acid-inducible protein F
OQH41_RS07035	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
OQH41_RS07040	COG2271	Major facilitator Superfamily
OQH41_RS07045	COG0753	catalase activity
OQH41_RS07050	COG3038	cytochrome b561
OQH41_RS07070	COG2267	carboxylic ester hydrolase activity
OQH41_RS07075	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
OQH41_RS07080	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
OQH41_RS07085	COG1012	belongs to the aldehyde dehydrogenase family
OQH41_RS07095	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
OQH41_RS07105	COG1012	belongs to the aldehyde dehydrogenase family
OQH41_RS07110	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
OQH41_RS07115	COG0583	DNA-binding transcription factor activity
OQH41_RS07125	COG1414	Transcriptional regulator
OQH41_RS07130	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
OQH41_RS07140	COG1840	ABC-type Fe3 transport system, periplasmic component
OQH41_RS07145	COG3842	ATPase activity
OQH41_RS07160	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
OQH41_RS07165	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
OQH41_RS07170	COG2814	Major facilitator Superfamily
OQH41_RS07175	COG1960	acyl-CoA dehydrogenase activity
OQH41_RS07190	COG1024	Enoyl-CoA hydratase
OQH41_RS07200	COG2814	Major facilitator Superfamily
OQH41_RS07210	COG0183	Belongs to the thiolase family
OQH41_RS07215	COG1250	3-hydroxyacyl-CoA dehydrogenase
OQH41_RS07220	COG1028	Short-chain dehydrogenase reductase Sdr
OQH41_RS07225	COG1024	Enoyl-CoA hydratase
OQH41_RS07230	COG1960	acyl-CoA dehydrogenase activity
OQH41_RS07235	COG2814	Major facilitator Superfamily
OQH41_RS07240	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
OQH41_RS07245	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
OQH41_RS07255	COG2814	Major facilitator Superfamily
OQH41_RS07265	COG1960	acyl-CoA dehydrogenase activity
OQH41_RS07280	COG0583	DNA-binding transcription factor activity
OQH41_RS07290	COG4770	biotin carboxylase activity
OQH41_RS07295	COG1024	Enoyl-CoA hydratase
OQH41_RS07300	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
OQH41_RS07305	COG1960	acyl-CoA dehydrogenase activity
OQH41_RS07310	COG1309	transcriptional regulator
OQH41_RS07315	COG0318	PFAM AMP-dependent synthetase and ligase
OQH41_RS07335	COG0583	DNA-binding transcription factor activity
OQH41_RS07415	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
OQH41_RS07435	COG2205	protein histidine kinase activity
OQH41_RS07435	COG0784	Response regulator, receiver
OQH41_RS07455	COG0765	amino acid transport
OQH41_RS07460	COG0765	amino acid transport
OQH41_RS07465	COG1126	abc transporter atp-binding protein
OQH41_RS07470	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
OQH41_RS07475	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
OQH41_RS07490	COG1280	lysine exporter protein (LysE YggA)
OQH41_RS07495	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
OQH41_RS07505	COG1045	serine acetyltransferase
OQH41_RS07520	COG0583	DNA-binding transcription factor activity
OQH41_RS07525	COG0625	glutathione transferase activity
OQH41_RS07530	COG0625	glutathione transferase activity
OQH41_RS07535	COG0583	DNA-binding transcription factor activity
OQH41_RS07545	COG1346	cytolysis
OQH41_RS07565	COG2814	Major facilitator Superfamily
OQH41_RS07575	COG0583	DNA-binding transcription factor activity
OQH41_RS07585	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
OQH41_RS07590	COG3052	prosthetic group binding
OQH41_RS07610	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
OQH41_RS07630	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
OQH41_RS07640	COG1294	oxidase, subunit
OQH41_RS07645	COG1271	oxidase subunit
OQH41_RS07665	COG0477	Major facilitator Superfamily
OQH41_RS07675	COG4521	taurine ABC transporter
OQH41_RS07680	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
OQH41_RS07685	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
OQH41_RS07690	COG2175	clavaminate synthase activity
OQH41_RS07700	COG1953	Uracil, thiamine, allantoin
OQH41_RS07710	COG0583	DNA-binding transcription factor activity
OQH41_RS07720	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
OQH41_RS07735	COG0640	Transcriptional regulator
OQH41_RS07740	COG0798	PFAM Bile acid sodium symporter
OQH41_RS07745	COG0583	DNA-binding transcription factor activity
OQH41_RS07760	COG3634	alkyl hydroperoxide reductase activity
OQH41_RS07800	COG0436	Aminotransferase
OQH41_RS07810	COG0386	Belongs to the glutathione peroxidase family
OQH41_RS07850	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
OQH41_RS07875	COG0012	GTP binding
OQH41_RS07880	COG2011	ABC-type metal ion transport system permease component
OQH41_RS07885	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
OQH41_RS07895	COG1464	Belongs to the NlpA lipoprotein family
OQH41_RS07925	COG0765	amino acid transport
OQH41_RS07930	COG0765	amino acid transport
OQH41_RS07935	COG1126	abc transporter atp-binding protein
OQH41_RS07945	COG1522	sequence-specific DNA binding
OQH41_RS07960	COG1309	transcriptional regulator
OQH41_RS07980	COG0583	DNA-binding transcription factor activity
OQH41_RS07990	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
OQH41_RS08000	COG0697	spore germination
OQH41_RS08035	COG3121	Chaperone
OQH41_RS08040	COG3539	Fimbrial protein
OQH41_RS08065	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
OQH41_RS08065	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
OQH41_RS08110	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
OQH41_RS08120	COG2353	YceI-like domain
OQH41_RS08130	COG3698	Phosphodiester glycosidase
OQH41_RS08145	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
OQH41_RS08150	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
OQH41_RS08150	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
OQH41_RS08150	COG0506	proline dehydrogenase activity
OQH41_RS08160	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
OQH41_RS08165	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
OQH41_RS08185	COG1132	(ABC) transporter
OQH41_RS08190	COG3122	Protein conserved in bacteria
OQH41_RS08195	COG3619	membrane
OQH41_RS08205	COG0640	Transcriptional regulator
OQH41_RS08215	COG2850	peptidyl-arginine hydroxylation
OQH41_RS08220	COG0424	maF-like protein
OQH41_RS08240	COG0191	fructose-bisphosphate aldolase activity
OQH41_RS08245	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
OQH41_RS08260	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
OQH41_RS08270	COG1192	Involved in chromosome partitioning
OQH41_RS08275	COG1475	DNA binding
OQH41_RS08280	COG0811	peptide transport
OQH41_RS08290	COG1132	(ABC) transporter
OQH41_RS08295	COG1663	tetraacyldisaccharide 4'-kinase activity
OQH41_RS08315	COG0084	hydrolase, TatD family'
OQH41_RS08380	COG0776	regulation of translation
OQH41_RS08410	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
OQH41_RS08415	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
OQH41_RS08455	COG0339	signal peptide processing
OQH41_RS08465	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
OQH41_RS08500	COG0702	epimerase
OQH41_RS08505	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
OQH41_RS08525	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
OQH41_RS08555	COG0316	Belongs to the HesB IscA family
OQH41_RS08560	COG0822	iron-sulfur transferase activity
OQH41_RS08585	COG0776	regulation of translation
OQH41_RS08590	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
OQH41_RS08595	COG2207	Transcriptional regulator
OQH41_RS08600	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
OQH41_RS08605	COG1960	acyl-CoA dehydrogenase activity
OQH41_RS08610	COG1960	acyl-CoA dehydrogenase activity
OQH41_RS08625	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
OQH41_RS08645	COG4264	IucA IucC family
OQH41_RS08650	COG4264	IucA IucC family
OQH41_RS08660	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
OQH41_RS08690	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
OQH41_RS08705	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
OQH41_RS08710	COG0406	alpha-ribazole phosphatase activity
OQH41_RS08725	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
OQH41_RS08730	COG0730	response to heat
OQH41_RS08745	COG4372	Transposase
OQH41_RS08765	COG4773	Receptor
OQH41_RS08770	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
OQH41_RS08785	COG1131	(ABC) transporter
OQH41_RS08790	COG0842	Transport permease protein
OQH41_RS08795	COG0842	Transport permease protein
OQH41_RS08850	COG2226	methyltransferase
OQH41_RS08875	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
OQH41_RS08910	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
OQH41_RS08920	COG0133	tryptophan synthase activity
OQH41_RS08935	COG3706	GGDEF domain
OQH41_RS08950	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
OQH41_RS08955	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
OQH41_RS08960	COG0022	dehydrogenase e1 component
OQH41_RS08965	COG0508	dehydrogenase complex catalyzes the overall conversion of
OQH41_RS08970	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
OQH41_RS08980	COG1063	alcohol dehydrogenase
OQH41_RS08985	COG3781	membrane
OQH41_RS08995	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
OQH41_RS08995	COG3453	Protein conserved in bacteria
OQH41_RS09010	COG0730	response to heat
OQH41_RS09025	COG2207	Transcriptional regulator
OQH41_RS09025	COG3708	Transcriptional regulator
OQH41_RS09030	COG1733	regulation of RNA biosynthetic process
OQH41_RS09035	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
OQH41_RS09045	COG2188	Transcriptional regulator
OQH41_RS09060	COG4521	taurine ABC transporter
OQH41_RS09065	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
OQH41_RS09085	COG0477	Major facilitator Superfamily
OQH41_RS09095	COG1027	Aspartate ammonia-lyase
OQH41_RS09125	COG0583	DNA-binding transcription factor activity
OQH41_RS09130	COG0183	Belongs to the thiolase family
OQH41_RS09135	COG2031	fatty acid transporter
OQH41_RS09150	COG0583	DNA-binding transcription factor activity
OQH41_RS09160	COG2610	gluconate transmembrane transporter activity
OQH41_RS09165	COG1028	Short-chain dehydrogenase reductase Sdr
OQH41_RS09170	COG2207	Transcriptional regulator
OQH41_RS09185	COG1028	Short-chain dehydrogenase reductase Sdr
OQH41_RS09195	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
OQH41_RS09210	COG0543	2 iron, 2 sulfur cluster binding
OQH41_RS09210	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
OQH41_RS09215	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
OQH41_RS09220	COG4638	Rieske (2fe-2S)
OQH41_RS09230	COG0725	ABC transporter, periplasmic molybdate-binding protein
OQH41_RS09235	COG4149	molybdate abc transporter
OQH41_RS09240	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
OQH41_RS09245	COG1028	Short-chain dehydrogenase reductase Sdr
OQH41_RS09250	COG3433	isochorismatase activity
OQH41_RS09250	COG1535	isochorismatase
OQH41_RS09310	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
OQH41_RS09325	COG0753	catalase activity
OQH41_RS09335	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
OQH41_RS09360	COG3539	Fimbrial protein
OQH41_RS09425	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
OQH41_RS09435	COG2072	flavoprotein involved in K transport
OQH41_RS09445	COG1538	Outer membrane efflux protein
OQH41_RS09450	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
OQH41_RS09455	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
OQH41_RS09460	COG0745	RESPONSE REGULATOR receiver
OQH41_RS09465	COG2205	protein histidine kinase activity
OQH41_RS09480	COG2207	Transcriptional regulator
OQH41_RS09495	COG1028	Short-chain dehydrogenase reductase Sdr
OQH41_RS09505	COG1073	alpha beta
OQH41_RS09535	COG2801	Transposase and inactivated derivatives
OQH41_RS09560	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
OQH41_RS09635	COG1120	ATPase activity
OQH41_RS09640	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
OQH41_RS09655	COG1064	alcohol dehydrogenase
OQH41_RS09660	COG2207	Transcriptional regulator
OQH41_RS09665	COG2084	Dehydrogenase
OQH41_RS09675	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
OQH41_RS09705	COG0129	dihydroxy-acid dehydratase activity
OQH41_RS09710	COG1012	belongs to the aldehyde dehydrogenase family
OQH41_RS09755	COG2188	Transcriptional regulator
OQH41_RS09825	COG1473	amidohydrolase
OQH41_RS09835	COG0475	glutathione-regulated potassium exporter activity
OQH41_RS09835	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
OQH41_RS09845	COG0583	DNA-binding transcription factor activity
OQH41_RS09850	COG1335	isochorismatase
OQH41_RS09860	COG1309	transcriptional regulator
OQH41_RS09890	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
OQH41_RS09900	COG1902	pentaerythritol trinitrate reductase activity
OQH41_RS09900	COG0446	pyridine nucleotide-disulphide oxidoreductase
OQH41_RS09915	COG1012	belongs to the aldehyde dehydrogenase family
OQH41_RS09935	COG2186	Transcriptional regulator
OQH41_RS09945	COG0583	DNA-binding transcription factor activity
OQH41_RS09950	COG4948	Mandelate Racemase Muconate Lactonizing
OQH41_RS09955	COG4829	muconolactone delta-isomerase
OQH41_RS09965	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
OQH41_RS09970	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
OQH41_RS09975	COG0183	Belongs to the thiolase family
OQH41_RS09980	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
OQH41_RS10000	COG3733	amine oxidase
OQH41_RS10010	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
OQH41_RS10020	COG1028	Short-chain dehydrogenase reductase Sdr
OQH41_RS10030	COG4638	Rieske (2fe-2S)
OQH41_RS10050	COG0154	amidase activity
OQH41_RS10060	COG2814	Major facilitator Superfamily
OQH41_RS10085	COG1960	acyl-CoA dehydrogenase activity
OQH41_RS10090	COG0583	DNA-binding transcription factor activity
OQH41_RS10095	COG1414	Transcriptional regulator
OQH41_RS10110	COG2391	methyltransferase activity
OQH41_RS10120	COG4993	Dehydrogenase
OQH41_RS10125	COG3659	wide pore channel activity
OQH41_RS10130	COG3420	alginic acid biosynthetic process
OQH41_RS10135	COG0710	3-dehydroquinate dehydratase activity
OQH41_RS10140	COG3485	protocatechuate 3,4-dioxygenase
OQH41_RS10145	COG3485	protocatechuate 3,4-dioxygenase
OQH41_RS10150	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
OQH41_RS10155	COG2271	Major facilitator Superfamily
OQH41_RS10160	COG0596	Alpha beta hydrolase
OQH41_RS10165	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
OQH41_RS10170	COG0183	Belongs to the thiolase family
OQH41_RS10175	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
OQH41_RS10180	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
OQH41_RS10190	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
OQH41_RS10195	COG2323	membrane
OQH41_RS10240	COG1902	pentaerythritol trinitrate reductase activity
OQH41_RS10240	COG0446	pyridine nucleotide-disulphide oxidoreductase
OQH41_RS10265	COG0542	response to heat
OQH41_RS10270	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
OQH41_RS10300	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
OQH41_RS10305	COG0569	domain protein
OQH41_RS10310	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
OQH41_RS10325	COG4774	siderophore transport
OQH41_RS10330	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
OQH41_RS10340	COG1585	Membrane protein implicated in regulation of membrane protease activity
OQH41_RS10355	COG1294	oxidase, subunit
OQH41_RS10360	COG4890	Cyd operon protein YbgT
OQH41_RS10380	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
OQH41_RS10390	COG0552	protein localization to endoplasmic reticulum
OQH41_RS10415	COG0517	IMP dehydrogenase activity
OQH41_RS10415	COG0516	GMP reductase activity
OQH41_RS10420	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
OQH41_RS10425	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
OQH41_RS10435	COG0583	DNA-binding transcription factor activity
OQH41_RS10440	COG0024	Methionine aminopeptidase
OQH41_RS10470	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
OQH41_RS10470	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
OQH41_RS10475	COG1105	Belongs to the carbohydrate kinase PfkB family
OQH41_RS10480	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
OQH41_RS10480	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
OQH41_RS10480	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
OQH41_RS10520	COG2135	peptidase activity
OQH41_RS10525	COG0659	secondary active sulfate transmembrane transporter activity
OQH41_RS10545	COG1113	amino acid transport
OQH41_RS10555	COG1522	sequence-specific DNA binding
OQH41_RS10580	COG1011	Hydrolase
OQH41_RS10585	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
OQH41_RS10595	COG2137	regulation of response to DNA damage stimulus
OQH41_RS10610	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
OQH41_RS10630	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
OQH41_RS10645	COG0575	Belongs to the CDS family
OQH41_RS10650	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
OQH41_RS10670	COG3852	Histidine kinase
OQH41_RS10675	COG2204	response regulator
OQH41_RS10730	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
OQH41_RS10735	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
OQH41_RS10755	COG0697	spore germination
OQH41_RS10760	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
OQH41_RS10770	COG0303	'Molybdopterin
OQH41_RS10775	COG0315	cyclic pyranopterin monophosphate synthase activity
OQH41_RS10775	COG0521	Mo-molybdopterin cofactor biosynthetic process
OQH41_RS10790	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
OQH41_RS10795	COG0243	molybdopterin cofactor binding
OQH41_RS10805	COG0243	molybdopterin cofactor binding
OQH41_RS10810	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
OQH41_RS10815	COG2146	nitrite reductase [NAD(P)H] activity
OQH41_RS10815	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
OQH41_RS10825	COG0745	RESPONSE REGULATOR receiver
OQH41_RS10830	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
OQH41_RS10830	COG1116	anion transmembrane transporter activity
OQH41_RS10850	COG0511	ligase activity, forming carbon-carbon bonds
OQH41_RS10865	COG2814	Major facilitator Superfamily
OQH41_RS10885	COG0069	glutamate synthase activity
OQH41_RS10905	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
OQH41_RS10915	COG1454	alcohol dehydrogenase
OQH41_RS10920	COG0824	Thioesterase
OQH41_RS10935	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
OQH41_RS10960	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
OQH41_RS10965	COG2030	dehydratase
OQH41_RS10975	COG0183	Belongs to the thiolase family
OQH41_RS10990	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
OQH41_RS11000	COG1522	sequence-specific DNA binding
OQH41_RS11005	COG3135	benzoate transporter
OQH41_RS11015	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
OQH41_RS11040	COG0589	response to stress
OQH41_RS11045	COG0488	(ABC) transporter
OQH41_RS11065	COG4773	Receptor
OQH41_RS11095	COG0668	transmembrane transport
OQH41_RS11105	COG1309	transcriptional regulator
OQH41_RS11115	COG2801	Transposase and inactivated derivatives
OQH41_RS11130	COG1605	Chorismate mutase
OQH41_RS11140	COG4221	oxidoreductase activity
OQH41_RS11170	COG0308	aminopeptidase N
OQH41_RS11195	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
OQH41_RS11200	COG1454	alcohol dehydrogenase
OQH41_RS11220	COG0531	amino acid
OQH41_RS11225	COG4303	Ethanolamine ammonia lyase large subunit
OQH41_RS11230	COG4302	ethanolamine ammonia-lyase activity
OQH41_RS11235	COG0518	GMP synthase (glutamine-hydrolyzing) activity
OQH41_RS11235	COG0519	Catalyzes the synthesis of GMP from XMP
OQH41_RS11240	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
OQH41_RS11265	COG0697	spore germination
OQH41_RS11270	COG1923	regulation of RNA biosynthetic process
OQH41_RS11280	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
OQH41_RS11285	COG0802	atpase or kinase
OQH41_RS11305	COG1187	pseudouridine synthase activity
OQH41_RS11320	COG0583	DNA-binding transcription factor activity
OQH41_RS11335	COG2814	Major facilitator Superfamily
OQH41_RS11340	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
OQH41_RS11365	COG0729	surface antigen
OQH41_RS11385	COG0174	glutamine synthetase
OQH41_RS11390	COG0745	RESPONSE REGULATOR receiver
OQH41_RS11395	COG2205	protein histidine kinase activity
OQH41_RS11405	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
OQH41_RS11410	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
OQH41_RS11435	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
OQH41_RS11440	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
OQH41_RS11445	COG1960	acyl-CoA dehydrogenase activity
OQH41_RS11475	COG0583	DNA-binding transcription factor activity
OQH41_RS11490	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
OQH41_RS11500	COG3658	cytochrome
OQH41_RS11505	COG1215	transferase activity, transferring glycosyl groups
OQH41_RS11510	COG0726	polysaccharide deacetylase
OQH41_RS11510	COG1649	PFAM Uncharacterised BCR, COG1649
OQH41_RS11535	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
OQH41_RS11540	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
OQH41_RS11550	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
OQH41_RS11575	COG0305	Participates in initiation and elongation during chromosome replication
OQH41_RS11580	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
OQH41_RS11590	COG1305	Transglutaminase-like
OQH41_RS11600	COG2308	Evidence 4 Homologs of previously reported genes of
OQH41_RS11630	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
OQH41_RS11635	COG0138	bifunctional purine biosynthesis protein purh
OQH41_RS11640	COG0151	Belongs to the GarS family
OQH41_RS11645	COG1464	Belongs to the NlpA lipoprotein family
OQH41_RS11650	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
OQH41_RS11655	COG2011	ABC-type metal ion transport system permease component
OQH41_RS11660	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
OQH41_RS11670	COG1301	dicarboxylic acid transport
OQH41_RS11700	COG1794	racemase activity, acting on amino acids and derivatives
OQH41_RS11720	COG0745	RESPONSE REGULATOR receiver
OQH41_RS11725	COG0642	Histidine kinase
OQH41_RS11730	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
OQH41_RS11740	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
OQH41_RS11780	COG2351	hydroxyisourate hydrolase activity
OQH41_RS11790	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
OQH41_RS11790	COG3008	intermembrane lipid transfer
OQH41_RS11795	COG2995	paraquat-inducible protein a
OQH41_RS11815	COG2801	Transposase and inactivated derivatives
OQH41_RS11845	COG1051	belongs to the nudix hydrolase family
OQH41_RS11850	COG0477	Major facilitator Superfamily
OQH41_RS11900	COG2186	Transcriptional regulator
OQH41_RS11910	COG0786	glutamate:sodium symporter activity
OQH41_RS11925	COG3243	poly(R)-hydroxyalkanoic acid synthase
OQH41_RS11950	COG3111	PFAM Bacterial OB fold (BOF) protein
OQH41_RS12020	COG2831	hemolysin activation secretion protein
OQH41_RS12075	COG1610	YqeY-like protein
OQH41_RS12080	COG4783	chaperone-mediated protein folding
OQH41_RS12105	COG1286	toxin biosynthetic process
OQH41_RS12135	COG0778	Nitroreductase
OQH41_RS12145	COG0513	Belongs to the DEAD box helicase family
OQH41_RS12170	COG2363	Small membrane protein
OQH41_RS12200	COG1234	tRNA 3'-trailer cleavage
OQH41_RS12205	COG2195	Cleaves the N-terminal amino acid of tripeptides
OQH41_RS12215	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
OQH41_RS12230	COG1960	acyl-CoA dehydrogenase activity
OQH41_RS12235	COG1301	dicarboxylic acid transport
OQH41_RS12240	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
OQH41_RS12245	COG3139	Protein of unknown function (DUF1315)
OQH41_RS12250	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
OQH41_RS12255	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
OQH41_RS12265	COG0494	nUDIX hydrolase
OQH41_RS12275	COG0642	Histidine kinase
OQH41_RS12290	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
OQH41_RS12300	COG1720	tRNA m6t6A37 methyltransferase activity
OQH41_RS12320	COG0826	peptidase U32
OQH41_RS12325	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
OQH41_RS12335	COG4598	ABC transporter
OQH41_RS12340	COG4160	amino acid transport
OQH41_RS12345	COG4215	(ABC) transporter
OQH41_RS12360	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
OQH41_RS12405	COG1131	(ABC) transporter
OQH41_RS12410	COG0842	Transport permease protein
OQH41_RS12425	COG0772	Belongs to the SEDS family
OQH41_RS12430	COG2951	lytic endotransglycosylase activity
OQH41_RS12455	COG2207	Transcriptional regulator
OQH41_RS12470	COG0052	Belongs to the universal ribosomal protein uS2 family
OQH41_RS12475	COG0024	Methionine aminopeptidase
OQH41_RS12485	COG2223	nitrite transmembrane transporter activity
OQH41_RS12495	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
OQH41_RS12500	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
OQH41_RS12505	COG1960	acyl-CoA dehydrogenase activity
OQH41_RS12520	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
OQH41_RS12525	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
OQH41_RS12530	COG1385	rRNA (uridine-N3-)-methyltransferase activity
OQH41_RS12550	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
OQH41_RS12555	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
OQH41_RS12560	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
OQH41_RS12595	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
OQH41_RS12605	COG0174	glutamine synthetase
OQH41_RS12620	COG0512	Glutamine amidotransferase of anthranilate synthase
OQH41_RS12625	COG0308	aminopeptidase N
OQH41_RS12655	COG1529	Aldehyde oxidase and xanthine dehydrogenase
OQH41_RS12665	COG0302	gtp cyclohydrolase
OQH41_RS12685	COG3739	integral membrane protein
OQH41_RS12700	COG1169	isochorismate synthase
OQH41_RS12705	COG2977	Belongs to the P-Pant transferase superfamily
OQH41_RS12710	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
OQH41_RS12715	COG1132	(ABC) transporter
OQH41_RS12720	COG1132	(ABC) transporter
OQH41_RS12735	COG1535	isochorismatase
OQH41_RS12735	COG3433	isochorismatase activity
OQH41_RS12740	COG1021	2,3-dihydroxybenzoate-AMP ligase
OQH41_RS12745	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
OQH41_RS12755	COG4774	siderophore transport
OQH41_RS12760	COG4607	ABC-type enterochelin transport system periplasmic component
OQH41_RS12765	COG4604	ABC transporter, ATP-binding protein
OQH41_RS12770	COG4605	iron ion homeostasis
OQH41_RS12775	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
OQH41_RS12780	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
OQH41_RS12795	COG2964	Protein conserved in bacteria
OQH41_RS12805	COG1741	Belongs to the pirin family
OQH41_RS12820	COG2801	Transposase and inactivated derivatives
OQH41_RS12855	COG2879	small protein
OQH41_RS12860	COG1966	Carbon starvation protein
OQH41_RS12880	COG4943	cyclic-guanylate-specific phosphodiesterase activity
OQH41_RS12905	COG1067	ATP-dependent peptidase activity
OQH41_RS12910	COG0583	DNA-binding transcription factor activity
OQH41_RS12935	COG1686	Belongs to the peptidase S11 family
OQH41_RS12940	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
OQH41_RS12975	COG0616	signal peptide processing
OQH41_RS12980	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
OQH41_RS12990	COG0573	inorganic phosphate transmembrane transporter activity
OQH41_RS12995	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
OQH41_RS13000	COG1113	amino acid transport
OQH41_RS13005	COG3961	Belongs to the TPP enzyme family
OQH41_RS13010	COG1522	sequence-specific DNA binding
OQH41_RS13020	COG0076	glutamate decarboxylase activity
OQH41_RS13025	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
OQH41_RS13060	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
OQH41_RS13095	COG0352	thiamine-phosphate diphosphorylase activity
OQH41_RS13120	COG0612	Peptidase, M16
OQH41_RS13130	COG1823	symporter activity
OQH41_RS13135	COG0583	DNA-binding transcription factor activity
OQH41_RS13140	COG0477	Major facilitator Superfamily
OQH41_RS13165	COG1187	pseudouridine synthase activity
OQH41_RS13180	COG1686	Belongs to the peptidase S11 family
OQH41_RS13185	COG1252	NADH dehydrogenase
OQH41_RS13195	COG0415	Belongs to the DNA photolyase family
OQH41_RS13210	COG1215	transferase activity, transferring glycosyl groups
OQH41_RS13240	COG2070	2-Nitropropane dioxygenase
OQH41_RS13295	COG0556	nucleotide-excision repair
OQH41_RS13315	COG0436	Aminotransferase
OQH41_RS13345	COG4221	oxidoreductase activity
OQH41_RS13355	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
OQH41_RS13360	COG1381	Involved in DNA repair and RecF pathway recombination
OQH41_RS13370	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
OQH41_RS13385	COG0681	Belongs to the peptidase S26 family
OQH41_RS13400	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
OQH41_RS13420	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
OQH41_RS13425	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
OQH41_RS13430	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
OQH41_RS13440	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
OQH41_RS13445	COG4208	sulfate ABC transporter
OQH41_RS13450	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
OQH41_RS13455	COG0583	DNA-binding transcription factor activity
OQH41_RS13460	COG4625	pathogenesis
OQH41_RS13475	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
OQH41_RS13490	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
OQH41_RS13500	COG1051	belongs to the nudix hydrolase family
OQH41_RS13500	COG1056	cytidyltransferase-related domain
OQH41_RS13505	COG1024	Enoyl-CoA hydratase
OQH41_RS13520	COG2814	Major facilitator Superfamily
OQH41_RS13525	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
OQH41_RS13525	COG0047	phosphoribosylformylglycinamidine synthase activity
OQH41_RS13550	COG0824	Thioesterase
OQH41_RS13570	COG0823	Involved in the tonB-independent uptake of proteins
OQH41_RS13590	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
OQH41_RS13625	COG0628	permease
OQH41_RS13635	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
OQH41_RS13640	COG0596	Alpha beta hydrolase
OQH41_RS13645	COG0616	signal peptide processing
OQH41_RS13645	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
OQH41_RS13655	COG2333	competence protein COMEC
OQH41_RS13655	COG0658	competence protein
OQH41_RS13660	COG1136	(ABC) transporter
OQH41_RS13665	COG4591	ABC-type transport system involved in lipoprotein release permease component
OQH41_RS13700	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
OQH41_RS13720	COG0463	Glycosyl transferase, family 2
OQH41_RS13760	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
OQH41_RS13765	COG1280	lysine exporter protein (LysE YggA)
OQH41_RS13770	COG2267	carboxylic ester hydrolase activity
OQH41_RS13780	COG0019	diaminopimelate decarboxylase activity
OQH41_RS13790	COG1113	amino acid transport
OQH41_RS13805	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
OQH41_RS13815	COG3339	Conserved Protein
OQH41_RS13820	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
OQH41_RS13825	COG0243	molybdopterin cofactor binding
OQH41_RS13830	COG1929	Belongs to the glycerate kinase type-1 family
OQH41_RS13845	COG0778	Nitroreductase
OQH41_RS13860	COG2801	Transposase and inactivated derivatives
OQH41_RS13890	COG3811	Belongs to the UPF0386 family
OQH41_RS13900	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
OQH41_RS13915	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
OQH41_RS13935	COG0741	lytic transglycosylase activity
OQH41_RS13955	COG0584	glycerophosphoryl diester phosphodiesterase
OQH41_RS13960	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
OQH41_RS13980	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
OQH41_RS13985	COG1597	lipid kinase activity
OQH41_RS14000	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
OQH41_RS14005	COG0477	Major facilitator Superfamily
OQH41_RS14055	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
OQH41_RS14060	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
OQH41_RS14085	COG0505	Belongs to the CarA family
OQH41_RS14105	COG0589	response to stress
OQH41_RS14155	COG2321	neutral zinc metallopeptidase
OQH41_RS14160	COG2354	Protein conserved in bacteria
OQH41_RS14180	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
OQH41_RS14205	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
OQH41_RS14210	COG1053	succinate dehydrogenase
OQH41_RS14215	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
OQH41_RS14220	COG2009	succinate dehydrogenase
OQH41_RS14255	COG2921	Belongs to the UPF0250 family
OQH41_RS14260	COG0321	lipoyl(octanoyl) transferase activity
OQH41_RS14275	COG4372	Transposase
OQH41_RS14290	COG0531	amino acid
OQH41_RS14300	COG1733	regulation of RNA biosynthetic process
OQH41_RS14305	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
OQH41_RS14310	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
OQH41_RS14310	COG1648	precorrin-2 dehydrogenase activity
OQH41_RS14325	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
OQH41_RS14355	COG0671	phosphoesterase, PA-phosphatase related
OQH41_RS14360	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
OQH41_RS14370	COG1538	Outer membrane efflux protein
OQH41_RS14375	COG0393	Putative heavy-metal-binding
OQH41_RS14390	COG1028	Short-chain dehydrogenase reductase Sdr
OQH41_RS14400	COG0525	valine-tRNA ligase activity
OQH41_RS14420	COG0583	DNA-binding transcription factor activity
OQH41_RS14425	COG0004	ammonium transporteR
OQH41_RS14435	COG0642	Histidine kinase
OQH41_RS14440	COG0745	RESPONSE REGULATOR receiver
OQH41_RS14445	COG2194	sulfuric ester hydrolase activity
OQH41_RS14465	COG1752	Esterase of the alpha-beta hydrolase superfamily
OQH41_RS14480	COG2315	Protein conserved in bacteria
OQH41_RS14485	COG0142	geranyltranstransferase activity
OQH41_RS14490	COG2828	Protein conserved in bacteria
OQH41_RS14495	COG1113	amino acid transport
OQH41_RS14515	COG2207	Transcriptional regulator
OQH41_RS14540	COG2249	NAD(P)H dehydrogenase (quinone) activity
OQH41_RS14550	COG0560	Phosphoserine phosphatase
OQH41_RS14560	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
OQH41_RS14570	COG1530	ribonuclease E activity
OQH41_RS14575	COG0424	maF-like protein
OQH41_RS14580	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
OQH41_RS14585	COG1792	Involved in formation and maintenance of cell shape
OQH41_RS14590	COG1077	Cell shape determining protein MreB Mrl
OQH41_RS14595	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
OQH41_RS14605	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
OQH41_RS14630	COG3590	peptidase
OQH41_RS14635	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
OQH41_RS14640	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
OQH41_RS14645	COG1752	Esterase of the alpha-beta hydrolase superfamily
OQH41_RS14650	COG1115	amino acid carrier protein
OQH41_RS14670	COG2814	Major facilitator Superfamily
OQH41_RS14675	COG1289	transmembrane transporter activity
OQH41_RS14685	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
OQH41_RS14725	COG1376	ErfK ybiS ycfS ynhG family protein
OQH41_RS14730	COG2832	Protein of unknown function (DUF454)
OQH41_RS14740	COG5510	response to toxic substance
OQH41_RS14765	COG0840	transmembrane signaling receptor activity
OQH41_RS14805	COG3422	double-strand break repair
OQH41_RS14810	COG2824	Alkylphosphonate utilization operon protein PhnA
OQH41_RS14815	COG3189	MarR family transcriptional regulator
OQH41_RS14825	COG0354	folic acid binding
OQH41_RS14830	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
OQH41_RS14840	COG0679	Auxin Efflux Carrier
OQH41_RS14845	COG1902	pentaerythritol trinitrate reductase activity
OQH41_RS14850	COG4772	TonB-dependent receptor
OQH41_RS14855	COG2094	Belongs to the DNA glycosylase MPG family
OQH41_RS14880	COG1217	gtp-binding protein TYPA
OQH41_RS14885	COG2233	PERMEase
OQH41_RS14895	COG0833	amino acid
OQH41_RS14900	COG1690	Belongs to the RtcB family
OQH41_RS14910	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
OQH41_RS14910	COG2885	chlorophyll binding
OQH41_RS14920	COG0183	Belongs to the thiolase family
OQH41_RS14940	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
OQH41_RS14960	COG2207	Transcriptional regulator
OQH41_RS14965	COG0183	Belongs to the thiolase family
OQH41_RS14995	COG1272	protein, Hemolysin III
OQH41_RS15000	COG0477	Major facilitator Superfamily
OQH41_RS15015	COG0450	alkyl hydroperoxide reductase
OQH41_RS15035	COG0285	dihydrofolate synthase activity
OQH41_RS15085	COG2096	Adenosyltransferase
OQH41_RS15105	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
OQH41_RS15110	COG0745	RESPONSE REGULATOR receiver
OQH41_RS15115	COG2205	protein histidine kinase activity
OQH41_RS15125	COG1960	acyl-CoA dehydrogenase activity
OQH41_RS15130	COG1960	acyl-CoA dehydrogenase activity
OQH41_RS15180	COG1215	transferase activity, transferring glycosyl groups
OQH41_RS15195	COG1091	dTDP-4-dehydrorhamnose reductase activity
OQH41_RS15210	COG0438	transferase activity, transferring glycosyl groups
OQH41_RS15215	COG0726	polysaccharide deacetylase
OQH41_RS15230	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
OQH41_RS15235	COG2205	protein histidine kinase activity
OQH41_RS15265	COG1862	Preprotein translocase
OQH41_RS15275	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
OQH41_RS15285	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
OQH41_RS15295	COG3781	membrane
OQH41_RS15300	COG0613	PHP domain protein
OQH41_RS15310	COG2350	Protein conserved in bacteria
OQH41_RS15340	COG1607	acyl-coa hydrolase
OQH41_RS15400	COG2199	diguanylate cyclase activity
OQH41_RS15410	COG1408	metallophosphoesterase
OQH41_RS15415	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
OQH41_RS15425	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
OQH41_RS15445	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
OQH41_RS15450	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
OQH41_RS15465	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
OQH41_RS15475	COG2969	positive regulation of protein catabolic process
OQH41_RS15495	COG1960	acyl-CoA dehydrogenase activity
OQH41_RS15500	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
OQH41_RS15515	COG1309	transcriptional regulator
OQH41_RS15520	COG1960	acyl-CoA dehydrogenase activity
OQH41_RS15565	COG1183	phosphatidylcholine synthase activity
OQH41_RS15570	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
OQH41_RS15600	COG0739	heme binding
OQH41_RS15600	COG1196	nuclear chromosome segregation
OQH41_RS15600	COG0741	lytic transglycosylase activity
OQH41_RS15610	COG1702	phosphate starvation-inducible protein PhoH
OQH41_RS15645	COG1295	ribonuclease BN
OQH41_RS15650	COG0697	spore germination
OQH41_RS15655	COG2169	Transcriptional regulator
OQH41_RS15660	COG0179	Fumarylacetoacetate (FAA) hydrolase
OQH41_RS15705	COG0557	exoribonuclease II activity
OQH41_RS15710	COG0339	signal peptide processing
OQH41_RS15715	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
OQH41_RS15745	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
OQH41_RS15750	COG1960	acyl-CoA dehydrogenase activity
OQH41_RS15905	COG0626	cystathionine gamma-synthase activity
OQH41_RS15910	COG0433	COG0433 Predicted ATPase
OQH41_RS15920	COG1017	nitric oxide dioxygenase activity
OQH41_RS15920	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
OQH41_RS15925	COG1959	2 iron, 2 sulfur cluster binding
OQH41_RS15940	COG1301	dicarboxylic acid transport
OQH41_RS15945	COG1946	Acyl-CoA thioesterase
OQH41_RS15965	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
OQH41_RS15970	COG1040	competence protein
OQH41_RS15975	COG0494	nUDIX hydrolase
OQH41_RS15985	COG0598	Magnesium transport protein CorA
OQH41_RS15995	COG2854	intermembrane phospholipid transfer
OQH41_RS16005	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
OQH41_RS16010	COG1127	ABC transporter
OQH41_RS16020	COG0513	Belongs to the DEAD box helicase family
OQH41_RS16040	COG0408	coproporphyrinogen oxidase activity
OQH41_RS16055	COG1960	acyl-CoA dehydrogenase activity
OQH41_RS16065	COG1983	PspC domain protein
OQH41_RS16070	COG0517	IMP dehydrogenase activity
OQH41_RS16105	COG1106	Psort location Cytoplasmic, score
OQH41_RS16130	COG0583	DNA-binding transcription factor activity
OQH41_RS16170	COG1012	belongs to the aldehyde dehydrogenase family
OQH41_RS16180	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
OQH41_RS16185	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
OQH41_RS16190	COG0833	amino acid
OQH41_RS16220	COG1192	Involved in chromosome partitioning
OQH41_RS16225	COG0628	permease
OQH41_RS16235	COG1289	transmembrane transporter activity
OQH41_RS16250	COG2249	NAD(P)H dehydrogenase (quinone) activity
OQH41_RS16255	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
OQH41_RS16265	COG0277	FAD linked oxidase domain protein
OQH41_RS16270	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
OQH41_RS16295	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
OQH41_RS16300	COG5380	lipid catabolic process
OQH41_RS16320	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
OQH41_RS16370	COG0194	GDP metabolic process
OQH41_RS16385	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
OQH41_RS16405	COG3307	-O-antigen
OQH41_RS16425	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
OQH41_RS16430	COG1704	LemA family
OQH41_RS16440	COG0493	'glutamate synthase
OQH41_RS16445	COG0070	glutamate synthase
OQH41_RS16445	COG0067	glutamate synthase
OQH41_RS16445	COG0069	glutamate synthase activity
OQH41_RS16495	COG2226	methyltransferase
OQH41_RS16510	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
OQH41_RS16515	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
OQH41_RS16560	COG0833	amino acid
OQH41_RS16625	COG0488	(ABC) transporter
OQH41_RS16630	COG2873	o-acetylhomoserine
OQH41_RS16635	COG4221	oxidoreductase activity
OQH41_RS16640	COG0659	secondary active sulfate transmembrane transporter activity
OQH41_RS16665	COG0427	acetyl-CoA hydrolase
OQH41_RS16695	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
OQH41_RS16735	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
OQH41_RS16790	COG0582	viral genome integration into host DNA
OQH41_RS16825	COG4372	Transposase
OQH41_RS16835	COG1132	(ABC) transporter
OQH41_RS16870	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
OQH41_RS16935	COG2814	Major facilitator Superfamily
OQH41_RS17010	COG2249	NAD(P)H dehydrogenase (quinone) activity
OQH41_RS17015	COG1733	regulation of RNA biosynthetic process
OQH41_RS17045	COG0667	Aldo Keto reductase
OQH41_RS17065	COG0583	DNA-binding transcription factor activity
OQH41_RS17070	COG2814	Major facilitator Superfamily
OQH41_RS17100	COG1335	isochorismatase
OQH41_RS17110	COG1012	belongs to the aldehyde dehydrogenase family
OQH41_RS17115	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
OQH41_RS17125	COG1113	amino acid transport
OQH41_RS17135	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
OQH41_RS17150	COG2814	Major facilitator Superfamily
OQH41_RS17160	COG0351	phosphomethylpyrimidine kinase
OQH41_RS17160	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
OQH41_RS17160	COG0352	thiamine-phosphate diphosphorylase activity
OQH41_RS17180	COG1309	transcriptional regulator
OQH41_RS17185	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
OQH41_RS17200	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
OQH41_RS17210	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
OQH41_RS17215	COG3162	membrane
OQH41_RS17220	COG2198	Histidine kinase
OQH41_RS17220	COG0784	Response regulator, receiver
OQH41_RS17220	COG2205	protein histidine kinase activity
OQH41_RS17245	COG1522	sequence-specific DNA binding
OQH41_RS17250	COG1335	isochorismatase
OQH41_RS17255	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
OQH41_RS17265	COG0668	transmembrane transport
OQH41_RS17270	COG1385	rRNA (uridine-N3-)-methyltransferase activity
OQH41_RS17275	COG1519	Transferase
OQH41_RS17280	COG1902	pentaerythritol trinitrate reductase activity
OQH41_RS17300	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
OQH41_RS17325	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
OQH41_RS17325	COG0426	domain, Protein
OQH41_RS17330	COG4774	siderophore transport
OQH41_RS17335	COG2119	membrane
OQH41_RS17345	COG0508	dehydrogenase complex catalyzes the overall conversion of
OQH41_RS17355	COG4942	peptidase
OQH41_RS17370	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
OQH41_RS17380	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
OQH41_RS17400	COG0189	ligase activity
OQH41_RS17425	COG0708	Exodeoxyribonuclease III
OQH41_RS17445	COG3706	GGDEF domain
OQH41_RS17480	COG2351	hydroxyisourate hydrolase activity
OQH41_RS17485	COG2233	PERMEase
OQH41_RS17495	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
OQH41_RS17505	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
OQH41_RS17510	COG1028	Short-chain dehydrogenase reductase Sdr
OQH41_RS17520	COG3150	esterase
OQH41_RS17565	COG5632	N-Acetylmuramoyl-L-alanine amidase
OQH41_RS17565	COG3409	Peptidoglycan-binding domain 1 protein
OQH41_RS17565	COG1388	LysM domain
OQH41_RS17580	COG2918	glutathione biosynthetic process
OQH41_RS17595	COG2733	membrane
OQH41_RS17600	COG0436	Aminotransferase
OQH41_RS17605	COG0534	Mate efflux family protein
OQH41_RS17690	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
OQH41_RS17695	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
OQH41_RS17705	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
OQH41_RS17715	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
OQH41_RS17730	COG0010	Belongs to the arginase family
OQH41_RS17760	COG2188	Transcriptional regulator
OQH41_RS17770	COG0523	cobalamin synthesis protein
OQH41_RS17780	COG1113	amino acid transport
OQH41_RS17790	COG0625	glutathione transferase activity
OQH41_RS17810	COG1683	Conserved Protein
OQH41_RS17815	COG0534	Mate efflux family protein
OQH41_RS17820	COG0385	Bile acid
OQH41_RS17825	COG1335	isochorismatase
OQH41_RS17830	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
OQH41_RS17850	COG2116	formate transmembrane transporter activity
OQH41_RS17855	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
OQH41_RS17860	COG2133	pyrroloquinoline quinone binding
OQH41_RS17865	COG2983	Belongs to the UPF0260 family
OQH41_RS17885	COG1194	a g-specific adenine glycosylase
OQH41_RS17900	COG2818	Glycosylase
OQH41_RS17905	COG1064	alcohol dehydrogenase
OQH41_RS17910	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
OQH41_RS17925	COG0583	DNA-binding transcription factor activity
OQH41_RS17930	COG0656	L-ascorbic acid biosynthetic process
OQH41_RS17935	COG2814	Major facilitator Superfamily
OQH41_RS17965	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
OQH41_RS17970	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
OQH41_RS17985	COG2233	PERMEase
OQH41_RS17990	COG0583	DNA-binding transcription factor activity
OQH41_RS18025	COG0733	neurotransmitter:sodium symporter activity
OQH41_RS18065	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
OQH41_RS18070	COG0657	acetylesterase activity
OQH41_RS18090	COG0583	DNA-binding transcription factor activity
OQH41_RS18125	COG2951	lytic endotransglycosylase activity
OQH41_RS18130	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
OQH41_RS18145	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
OQH41_RS18155	COG0671	phosphoesterase, PA-phosphatase related
OQH41_RS18160	COG0861	Integral membrane protein TerC family
OQH41_RS18170	COG0754	glutathionylspermidine amidase activity
OQH41_RS18180	COG0402	S-adenosylhomocysteine deaminase activity
OQH41_RS18195	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
OQH41_RS18200	COG1230	cation diffusion facilitator family transporter
OQH41_RS18260	COG0582	viral genome integration into host DNA
OQH41_RS18270	COG0706	membrane insertase activity
OQH41_RS18300	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
OQH41_RS18305	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
OQH41_RS18330	COG0347	Belongs to the P(II) protein family
OQH41_RS18335	COG0404	The glycine cleavage system catalyzes the degradation of glycine
OQH41_RS18345	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
OQH41_RS18365	COG2197	response regulator
OQH41_RS18370	COG3850	Histidine kinase
OQH41_RS18375	COG0404	The glycine cleavage system catalyzes the degradation of glycine
OQH41_RS18400	COG1475	DNA binding
OQH41_RS18405	COG1192	Involved in chromosome partitioning
OQH41_RS18460	COG4680	protein conserved in bacteria
OQH41_RS18465	COG1373	ATPase (AAA superfamily
OQH41_RS18500	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
OQH41_RS18505	COG3604	Transcriptional regulator
OQH41_RS18520	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
OQH41_RS18530	COG2144	transferase activity, transferring acyl groups
OQH41_RS18540	COG2072	flavoprotein involved in K transport
OQH41_RS18640	COG4683	PFAM Phage derived protein Gp49-like (DUF891)
OQH41_RS18690	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
OQH41_RS18770	COG0542	response to heat
OQH41_RS18775	COG0071	Belongs to the small heat shock protein (HSP20) family
OQH41_RS18790	COG0697	spore germination
OQH41_RS18795	COG1234	tRNA 3'-trailer cleavage
OQH41_RS18805	COG0583	DNA-binding transcription factor activity
OQH41_RS18820	COG0583	DNA-binding transcription factor activity
OQH41_RS18825	COG1733	regulation of RNA biosynthetic process
OQH41_RS18845	COG0582	viral genome integration into host DNA
OQH41_RS18850	COG0069	glutamate synthase activity
OQH41_RS18855	COG2218	PFAM glutamate synthase alpha subunit domain protein
OQH41_RS18860	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
OQH41_RS18875	COG0004	ammonium transporteR
OQH41_RS18880	COG0004	ammonium transporteR
OQH41_RS18900	COG4772	TonB-dependent receptor
OQH41_RS18935	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
OQH41_RS18940	COG3636	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
OQH41_RS18945	COG3657	addiction module killer protein
OQH41_RS19010	COG0697	spore germination
OQH41_RS19075	COG0477	Major facilitator Superfamily
OQH41_RS19130	COG3077	Addiction module antitoxin, RelB DinJ family