locus-tag class description FI878_RS00005 PF11638 DnaA N-terminal domain FI878_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix FI878_RS00005 PF00308 Bacterial dnaA protein FI878_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain FI878_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain FI878_RS00010 PF02767 DNA polymerase III beta subunit, central domain FI878_RS00015 PF02463 RecF/RecN/SMC N terminal domain FI878_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FI878_RS00020 PF18053 DNA gyrase B subunit insert domain FI878_RS00020 PF00204 DNA gyrase B FI878_RS00020 PF01751 Toprim domain FI878_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus FI878_RS00030 PF09335 SNARE associated Golgi protein FI878_RS00035 PF12848 ABC transporter FI878_RS00035 PF00005 ABC transporter FI878_RS00055 PF01521 Iron-sulphur cluster biosynthesis FI878_RS00060 PF00561 alpha/beta hydrolase fold FI878_RS00065 PF03702 Anhydro-N-acetylmuramic acid kinase FI878_RS00070 PF00579 tRNA synthetases class I (W and Y) FI878_RS00110 PF00209 Sodium:neurotransmitter symporter family FI878_RS00120 PF01189 16S rRNA methyltransferase RsmB/F FI878_RS00120 PF01029 NusB family FI878_RS00125 PF00551 Formyl transferase FI878_RS00125 PF02911 Formyl transferase, C-terminal domain FI878_RS00130 PF00920 Dehydratase family FI878_RS00145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FI878_RS00145 PF03466 LysR substrate binding domain FI878_RS00150 PF00860 Permease family FI878_RS00155 PF00311 Phosphoenolpyruvate carboxylase FI878_RS00160 PF00440 Bacterial regulatory proteins, tetR family FI878_RS00160 PF08361 MAATS-type transcriptional repressor, C-terminal region FI878_RS00165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FI878_RS00170 PF00873 AcrB/AcrD/AcrF family FI878_RS00180 PF01556 DnaJ C terminal domain FI878_RS00180 PF00684 DnaJ central domain FI878_RS00180 PF00226 DnaJ domain FI878_RS00190 PF05173 Dihydrodipicolinate reductase, C-terminus FI878_RS00190 PF01113 Dihydrodipicolinate reductase, N-terminus FI878_RS00200 PF07690 Major Facilitator Superfamily FI878_RS00205 PF00248 Aldo/keto reductase family FI878_RS00210 PF03466 LysR substrate binding domain FI878_RS00210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FI878_RS00225 PF00392 Bacterial regulatory proteins, gntR family FI878_RS00225 PF00155 Aminotransferase class I and II FI878_RS00230 PF00107 Zinc-binding dehydrogenase FI878_RS00230 PF08240 Alcohol dehydrogenase GroES-like domain FI878_RS00235 PF03352 Methyladenine glycosylase FI878_RS00250 PF10576 Iron-sulfur binding domain of endonuclease III FI878_RS00250 PF00633 Helix-hairpin-helix motif FI878_RS00250 PF14815 NUDIX domain FI878_RS00250 PF00730 HhH-GPD superfamily base excision DNA repair protein FI878_RS00265 PF07043 Protein of unknown function (DUF1328) FI878_RS00270 PF13737 Transposase DDE domain FI878_RS00275 PF03692 Putative zinc- or iron-chelating domain FI878_RS00280 PF07995 Glucose / Sorbosone dehydrogenase FI878_RS00285 PF12002 MgsA AAA+ ATPase C terminal FI878_RS00285 PF16193 AAA C-terminal domain FI878_RS00285 PF00004 ATPase family associated with various cellular activities (AAA) FI878_RS00290 PF01226 Formate/nitrite transporter FI878_RS00300 PF01259 SAICAR synthetase FI878_RS00310 PF00701 Dihydrodipicolinate synthetase family FI878_RS00315 PF00857 Isochorismatase family FI878_RS00320 PF01758 Sodium Bile acid symporter family FI878_RS00325 PF01554 MatE FI878_RS00330 PF04463 Protein of unknown function (DUF523) FI878_RS00335 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FI878_RS00345 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FI878_RS00350 PF02798 Glutathione S-transferase, N-terminal domain FI878_RS00350 PF14497 Glutathione S-transferase, C-terminal domain FI878_RS00380 PF07683 Cobalamin synthesis protein cobW C-terminal domain FI878_RS00380 PF02492 CobW/HypB/UreG, nucleotide-binding domain FI878_RS00390 PF00392 Bacterial regulatory proteins, gntR family FI878_RS00390 PF07702 UTRA domain FI878_RS00395 PF05962 HutD FI878_RS00400 PF01175 Urocanase Rossmann-like domain FI878_RS00400 PF17392 Urocanase C-terminal domain FI878_RS00400 PF17391 Urocanase N-terminal domain FI878_RS00405 PF00221 Aromatic amino acid lyase FI878_RS00410 PF00324 Amino acid permease FI878_RS00415 PF01979 Amidohydrolase family FI878_RS00420 PF00491 Arginase family FI878_RS00435 PF01177 Asp/Glu/Hydantoin racemase FI878_RS00440 PF13817 IS66 C-terminal element FI878_RS00440 PF13005 zinc-finger binding domain of transposase IS66 FI878_RS00440 PF03050 Transposase IS66 family FI878_RS00440 PF13007 Transposase C of IS166 homeodomain FI878_RS00455 PF07859 alpha/beta hydrolase fold FI878_RS00460 PF08240 Alcohol dehydrogenase GroES-like domain FI878_RS00460 PF00107 Zinc-binding dehydrogenase FI878_RS00465 PF00171 Aldehyde dehydrogenase family FI878_RS00470 PF00158 Sigma-54 interaction domain FI878_RS00470 PF13426 PAS domain FI878_RS00470 PF02954 Bacterial regulatory protein, Fis family FI878_RS00475 PF12762 ISXO2-like transposase domain FI878_RS00480 PF01494 FAD binding domain FI878_RS00485 PF07690 Major Facilitator Superfamily FI878_RS00490 PF03466 LysR substrate binding domain FI878_RS00490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FI878_RS00535 PF02796 Helix-turn-helix domain of resolvase FI878_RS00535 PF00239 Resolvase, N terminal domain FI878_RS00540 PF04851 Type III restriction enzyme, res subunit FI878_RS00540 PF08774 VRR-NUC domain FI878_RS00550 PF01380 SIS domain FI878_RS00555 PF12804 MobA-like NTP transferase domain FI878_RS00555 PF14602 Hexapeptide repeat of succinyl-transferase FI878_RS00555 PF00132 Bacterial transferase hexapeptide (six repeats) FI878_RS00560 PF04608 Phosphatidylglycerophosphatase A FI878_RS00565 PF00586 AIR synthase related protein, N-terminal domain FI878_RS00565 PF02769 AIR synthase related protein, C-terminal domain FI878_RS00570 PF01029 NusB family FI878_RS00575 PF00885 6,7-dimethyl-8-ribityllumazine synthase FI878_RS00580 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FI878_RS00580 PF00925 GTP cyclohydrolase II FI878_RS00605 PF02580 D-Tyr-tRNA(Tyr) deacylase FI878_RS00610 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain FI878_RS00610 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FI878_RS00615 PF00581 Rhodanese-like domain FI878_RS00620 PF02666 Phosphatidylserine decarboxylase FI878_RS00625 PF03069 Acetamidase/Formamidase family FI878_RS00645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FI878_RS00645 PF00989 PAS fold FI878_RS00645 PF11808 Phosphate regulon sensor protein PhoR FI878_RS00645 PF00512 His Kinase A (phospho-acceptor) domain FI878_RS00650 PF00486 Transcriptional regulatory protein, C terminal FI878_RS00650 PF00072 Response regulator receiver domain FI878_RS00660 PF00106 short chain dehydrogenase FI878_RS00665 PF01554 MatE FI878_RS00670 PF00155 Aminotransferase class I and II FI878_RS00675 PF04286 Protein of unknown function (DUF445) FI878_RS00690 PF04262 Glutamate-cysteine ligase FI878_RS00695 PF02600 Disulfide bond formation protein DsbB FI878_RS00700 PF04717 Type VI secretion system, phage-baseplate injector FI878_RS00705 PF01476 LysM domain FI878_RS00705 PF00877 NlpC/P60 family FI878_RS00720 PF05728 Uncharacterised protein family (UPF0227) FI878_RS00725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FI878_RS00725 PF01751 Toprim domain FI878_RS00725 PF00986 DNA gyrase B subunit, carboxyl terminus FI878_RS00725 PF00204 DNA gyrase B FI878_RS00730 PF00106 short chain dehydrogenase FI878_RS00735 PF04115 Ureidoglycolate lyase FI878_RS00740 PF03561 Allantoicase repeat FI878_RS00745 PF01494 FAD binding domain FI878_RS00755 PF00860 Permease family FI878_RS00760 PF00576 HIUase/Transthyretin family FI878_RS00790 PF11412 Disulphide bond corrector protein DsbC FI878_RS00790 PF02683 Cytochrome C biogenesis protein transmembrane region FI878_RS00795 PF07694 5TMR of 5TMR-LYT FI878_RS00795 PF00990 Diguanylate cyclase, GGDEF domain FI878_RS00800 PF07859 alpha/beta hydrolase fold FI878_RS00810 PF03960 ArsC family FI878_RS00815 PF03372 Endonuclease/Exonuclease/phosphatase family FI878_RS00820 PF00156 Phosphoribosyl transferase domain FI878_RS00825 PF07715 TonB-dependent Receptor Plug Domain FI878_RS00825 PF00593 TonB dependent receptor FI878_RS00835 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FI878_RS00835 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FI878_RS00840 PF03033 Glycosyltransferase family 28 N-terminal domain FI878_RS00840 PF04101 Glycosyltransferase family 28 C-terminal domain FI878_RS00845 PF01225 Mur ligase family, catalytic domain FI878_RS00845 PF08245 Mur ligase middle domain FI878_RS00845 PF02875 Mur ligase family, glutamate ligase domain FI878_RS00850 PF07478 D-ala D-ala ligase C-terminus FI878_RS00850 PF01820 D-ala D-ala ligase N-terminus FI878_RS00855 PF08478 POTRA domain, FtsQ-type FI878_RS00855 PF03799 Cell division protein FtsQ FI878_RS00860 PF02491 SHS2 domain inserted in FTSA FI878_RS00865 PF00091 Tubulin/FtsZ family, GTPase domain FI878_RS00865 PF12327 FtsZ family, C-terminal domain FI878_RS00870 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase FI878_RS00880 PF01551 Peptidase family M23 FI878_RS00885 PF00456 Transketolase, thiamine diphosphate binding domain FI878_RS00885 PF17831 Pyruvate dehydrogenase E1 component middle domain FI878_RS00890 PF02817 e3 binding domain FI878_RS00890 PF00364 Biotin-requiring enzyme FI878_RS00890 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FI878_RS00900 PF01169 Uncharacterized protein family UPF0016 FI878_RS00905 PF00593 TonB dependent receptor FI878_RS00905 PF07715 TonB-dependent Receptor Plug Domain FI878_RS00910 PF00258 Flavodoxin FI878_RS00910 PF01613 Flavin reductase like domain FI878_RS00915 PF03692 Putative zinc- or iron-chelating domain FI878_RS00920 PF00478 IMP dehydrogenase / GMP reductase domain FI878_RS00920 PF00571 CBS domain FI878_RS00925 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FI878_RS00925 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FI878_RS00925 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FI878_RS00925 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FI878_RS00930 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region FI878_RS00930 PF01243 Pyridoxamine 5'-phosphate oxidase FI878_RS00935 PF01368 DHH family FI878_RS00935 PF02272 DHHA1 domain FI878_RS00935 PF17768 RecJ OB domain FI878_RS00955 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FI878_RS00960 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) FI878_RS00965 PF04452 RNA methyltransferase FI878_RS00970 PF00924 Mechanosensitive ion channel FI878_RS00980 PF13193 AMP-binding enzyme C-terminal domain FI878_RS00980 PF00501 AMP-binding enzyme FI878_RS00980 PF16177 Acetyl-coenzyme A synthetase N-terminus FI878_RS00985 PF00857 Isochorismatase family FI878_RS00990 PF01037 Lrp/AsnC ligand binding domain FI878_RS00995 PF00872 Transposase, Mutator family FI878_RS01000 PF00296 Luciferase-like monooxygenase FI878_RS01005 PF03358 NADPH-dependent FMN reductase FI878_RS01010 PF00196 Bacterial regulatory proteins, luxR family FI878_RS01010 PF00072 Response regulator receiver domain FI878_RS01020 PF00512 His Kinase A (phospho-acceptor) domain FI878_RS01020 PF01627 Hpt domain FI878_RS01020 PF00672 HAMP domain FI878_RS01020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FI878_RS01020 PF00072 Response regulator receiver domain FI878_RS01025 PF04341 Protein of unknown function, DUF485 FI878_RS01030 PF00474 Sodium:solute symporter family FI878_RS01040 PF02028 BCCT, betaine/carnitine/choline family transporter FI878_RS01050 PF17158 Membrane-associated sensor, integral membrane domain FI878_RS01050 PF00990 Diguanylate cyclase, GGDEF domain FI878_RS01060 PF17760 UvrA interaction domain FI878_RS01060 PF17755 UvrA DNA-binding domain FI878_RS01060 PF00005 ABC transporter FI878_RS01065 PF16925 Tetracyclin repressor-like, C-terminal domain FI878_RS01065 PF00440 Bacterial regulatory proteins, tetR family FI878_RS01070 PF00107 Zinc-binding dehydrogenase FI878_RS01070 PF08240 Alcohol dehydrogenase GroES-like domain FI878_RS01080 PF06942 GlpM protein FI878_RS01085 PF02581 Thiamine monophosphate synthase FI878_RS01085 PF08543 Phosphomethylpyrimidine kinase FI878_RS01085 PF03070 TENA/THI-4/PQQC family FI878_RS01095 PF07690 Major Facilitator Superfamily FI878_RS01100 PF00436 Single-strand binding protein family FI878_RS01110 PF03591 AzlC protein FI878_RS01120 PF00324 Amino acid permease FI878_RS01125 PF00392 Bacterial regulatory proteins, gntR family FI878_RS01125 PF00155 Aminotransferase class I and II FI878_RS01130 PF00202 Aminotransferase class-III FI878_RS01135 PF00171 Aldehyde dehydrogenase family FI878_RS01140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FI878_RS01145 PF00857 Isochorismatase family FI878_RS01165 PF01593 Flavin containing amine oxidoreductase FI878_RS01185 PF07690 Major Facilitator Superfamily FI878_RS01190 PF03466 LysR substrate binding domain FI878_RS01190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FI878_RS01210 PF00248 Aldo/keto reductase family FI878_RS01215 PF12833 Helix-turn-helix domain FI878_RS01215 PF02311 AraC-like ligand binding domain FI878_RS01240 PF01638 HxlR-like helix-turn-helix FI878_RS01245 PF02525 Flavodoxin-like fold FI878_RS01265 PF02705 K+ potassium transporter FI878_RS01290 PF00230 Major intrinsic protein FI878_RS01305 PF00977 Histidine biosynthesis protein FI878_RS01310 PF01636 Phosphotransferase enzyme family FI878_RS01325 PF03992 Antibiotic biosynthesis monooxygenase FI878_RS01340 PF00977 Histidine biosynthesis protein FI878_RS01355 PF00117 Glutamine amidotransferase class-I FI878_RS01360 PF00475 Imidazoleglycerol-phosphate dehydratase FI878_RS01380 PF00583 Acetyltransferase (GNAT) family FI878_RS01385 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain FI878_RS01385 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain FI878_RS01395 PF00672 HAMP domain FI878_RS01395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FI878_RS01395 PF00512 His Kinase A (phospho-acceptor) domain FI878_RS01400 PF00486 Transcriptional regulatory protein, C terminal FI878_RS01400 PF00072 Response regulator receiver domain FI878_RS01405 PF00575 S1 RNA binding domain FI878_RS01405 PF17674 HHH domain FI878_RS01405 PF09371 Tex-like protein N-terminal domain FI878_RS01405 PF16921 Tex protein YqgF-like domain FI878_RS01410 PF00916 Sulfate permease family FI878_RS01410 PF01740 STAS domain FI878_RS01415 PF00106 short chain dehydrogenase FI878_RS01420 PF01053 Cys/Met metabolism PLP-dependent enzyme FI878_RS01425 PF00005 ABC transporter FI878_RS01425 PF12848 ABC transporter FI878_RS01450 PF04191 Phospholipid methyltransferase FI878_RS01470 PF00529 HlyD membrane-fusion protein of T1SS FI878_RS01470 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FI878_RS01475 PF00873 AcrB/AcrD/AcrF family FI878_RS01480 PF01545 Cation efflux family FI878_RS01510 PF00324 Amino acid permease FI878_RS01525 PF00749 tRNA synthetases class I (E and Q), catalytic domain FI878_RS01540 PF01795 MraW methylase family FI878_RS01550 PF03717 Penicillin-binding Protein dimerisation domain FI878_RS01550 PF00905 Penicillin binding protein transpeptidase domain FI878_RS01555 PF02875 Mur ligase family, glutamate ligase domain FI878_RS01555 PF01225 Mur ligase family, catalytic domain FI878_RS01555 PF08245 Mur ligase middle domain FI878_RS01560 PF01225 Mur ligase family, catalytic domain FI878_RS01560 PF02875 Mur ligase family, glutamate ligase domain FI878_RS01560 PF08245 Mur ligase middle domain FI878_RS01565 PF00953 Glycosyl transferase family 4 FI878_RS01575 PF13847 Methyltransferase domain FI878_RS01580 PF17092 Penicillin-binding protein OB-like domain FI878_RS01580 PF00912 Transglycosylase FI878_RS01580 PF00905 Penicillin binding protein transpeptidase domain FI878_RS01605 PF11741 AMIN domain FI878_RS01605 PF03958 Bacterial type II/III secretion system short domain FI878_RS01605 PF07660 Secretin and TonB N terminus short domain FI878_RS01605 PF00263 Bacterial type II and III secretion system protein FI878_RS01610 PF01202 Shikimate kinase FI878_RS01615 PF01761 3-dehydroquinate synthase FI878_RS01625 PF01493 GXGXG motif FI878_RS01625 PF01645 Conserved region in glutamate synthase FI878_RS01625 PF00310 Glutamine amidotransferases class-II FI878_RS01625 PF04898 Glutamate synthase central domain FI878_RS01630 PF07992 Pyridine nucleotide-disulphide oxidoreductase FI878_RS01630 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FI878_RS01640 PF04011 LemA family FI878_RS01645 PF04536 TPM domain FI878_RS01655 PF07963 Prokaryotic N-terminal methylation motif FI878_RS01655 PF00114 Pilin (bacterial filament) FI878_RS01665 PF15864 Protein glycosylation ligase FI878_RS01665 PF04932 O-Antigen ligase FI878_RS01665 PF11846 Virulence factor membrane-bound polymerase, C-terminal FI878_RS01670 PF00210 Ferritin-like domain FI878_RS01675 PF04324 BFD-like [2Fe-2S] binding domain FI878_RS01680 PF01042 Endoribonuclease L-PSP FI878_RS01685 PF04607 Region found in RelA / SpoT proteins FI878_RS01685 PF13291 ACT domain FI878_RS01685 PF02824 TGS domain FI878_RS01695 PF01192 RNA polymerase Rpb6 FI878_RS01700 PF00625 Guanylate kinase FI878_RS01705 PF02401 LytB protein FI878_RS01745 PF00886 Ribosomal protein S16 FI878_RS01750 PF05239 PRC-barrel domain FI878_RS01750 PF01782 RimM N-terminal domain FI878_RS01755 PF01746 tRNA (Guanine-1)-methyltransferase FI878_RS01760 PF01245 Ribosomal protein L19 FI878_RS01765 PF00561 alpha/beta hydrolase fold FI878_RS01770 PF03280 Proteobacterial lipase chaperone protein FI878_RS01775 PF09157 Pseudouridine synthase II TruB, C-terminal FI878_RS01775 PF16198 tRNA pseudouridylate synthase B C-terminal domain FI878_RS01775 PF01509 TruB family pseudouridylate synthase (N terminal domain) FI878_RS01780 PF01925 Sulfite exporter TauE/SafE FI878_RS01790 PF00892 EamA-like transporter family FI878_RS01795 PF00892 EamA-like transporter family FI878_RS01800 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FI878_RS01800 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FI878_RS01805 PF01565 FAD binding domain FI878_RS01805 PF02913 FAD linked oxidases, C-terminal domain FI878_RS01815 PF03992 Antibiotic biosynthesis monooxygenase FI878_RS01820 PF02525 Flavodoxin-like fold FI878_RS01830 PF07690 Major Facilitator Superfamily FI878_RS01835 PF12805 FUSC-like inner membrane protein yccS FI878_RS01840 PF00080 Copper/zinc superoxide dismutase (SODC) FI878_RS01845 PF01594 AI-2E family transporter FI878_RS01850 PF13614 AAA domain FI878_RS01880 PF00324 Amino acid permease FI878_RS01885 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FI878_RS01885 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FI878_RS01890 PF00202 Aminotransferase class-III FI878_RS01895 PF04958 Arginine N-succinyltransferase beta subunit FI878_RS01900 PF00171 Aldehyde dehydrogenase family FI878_RS01905 PF04996 Succinylarginine dihydrolase FI878_RS01910 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family FI878_RS01925 PF00082 Subtilase family FI878_RS01925 PF05922 Peptidase inhibitor I9 FI878_RS01940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FI878_RS01940 PF03466 LysR substrate binding domain FI878_RS01945 PF00892 EamA-like transporter family FI878_RS01955 PF05746 DALR anticodon binding domain FI878_RS01955 PF02092 Glycyl-tRNA synthetase beta subunit FI878_RS01960 PF02091 Glycyl-tRNA synthetase alpha subunit FI878_RS01985 PF00571 CBS domain FI878_RS01990 PF04024 PspC domain FI878_RS02000 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FI878_RS02000 PF12806 Acetyl-CoA dehydrogenase C-terminal like FI878_RS02000 PF02770 Acyl-CoA dehydrogenase, middle domain FI878_RS02000 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FI878_RS02010 PF08501 Shikimate dehydrogenase substrate binding domain FI878_RS02010 PF01488 Shikimate / quinate 5-dehydrogenase FI878_RS02010 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FI878_RS02015 PF01218 Coproporphyrinogen III oxidase FI878_RS02020 PF00925 GTP cyclohydrolase II FI878_RS02025 PF02779 Transketolase, pyrimidine binding domain FI878_RS02025 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FI878_RS02025 PF02780 Transketolase, C-terminal domain FI878_RS02030 PF00459 Inositol monophosphatase family FI878_RS02035 PF03880 DbpA RNA binding domain FI878_RS02035 PF00270 DEAD/DEAH box helicase FI878_RS02035 PF12343 Cold shock protein DEAD box A FI878_RS02035 PF00271 Helicase conserved C-terminal domain FI878_RS02045 PF00005 ABC transporter FI878_RS02050 PF02405 Permease MlaE FI878_RS02060 PF05494 MlaC protein FI878_RS02070 PF01544 CorA-like Mg2+ transporter protein FI878_RS02075 PF03641 Possible lysine decarboxylase FI878_RS02080 PF00293 NUDIX domain FI878_RS02085 PF00156 Phosphoribosyl transferase domain FI878_RS02090 PF00271 Helicase conserved C-terminal domain FI878_RS02090 PF17191 RecG wedge domain FI878_RS02090 PF00270 DEAD/DEAH box helicase FI878_RS02105 PF01553 Acyltransferase FI878_RS02115 PF00375 Sodium:dicarboxylate symporter family FI878_RS02125 PF01926 50S ribosome-binding GTPase FI878_RS02130 PF02082 Transcriptional regulator FI878_RS02135 PF00175 Oxidoreductase NAD-binding domain FI878_RS02135 PF00042 Globin FI878_RS02135 PF00970 Oxidoreductase FAD-binding domain FI878_RS02140 PF05872 Bacterial protein of unknown function (DUF853) FI878_RS02145 PF01053 Cys/Met metabolism PLP-dependent enzyme FI878_RS02150 PF00117 Glutamine amidotransferase class-I FI878_RS02155 PF00338 Ribosomal protein S10p/S20e FI878_RS02160 PF00297 Ribosomal protein L3 FI878_RS02165 PF00573 Ribosomal protein L4/L1 family FI878_RS02170 PF00276 Ribosomal protein L23 FI878_RS02175 PF00181 Ribosomal Proteins L2, RNA binding domain FI878_RS02175 PF03947 Ribosomal Proteins L2, C-terminal domain FI878_RS02180 PF00203 Ribosomal protein S19 FI878_RS02185 PF00237 Ribosomal protein L22p/L17e FI878_RS02190 PF00189 Ribosomal protein S3, C-terminal domain FI878_RS02190 PF07650 KH domain FI878_RS02195 PF00252 Ribosomal protein L16p/L10e FI878_RS02200 PF00831 Ribosomal L29 protein FI878_RS02205 PF00366 Ribosomal protein S17 FI878_RS02210 PF00238 Ribosomal protein L14p/L23e FI878_RS02215 PF00467 KOW motif FI878_RS02215 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FI878_RS02220 PF00673 ribosomal L5P family C-terminus FI878_RS02220 PF00281 Ribosomal protein L5 FI878_RS02225 PF00253 Ribosomal protein S14p/S29e FI878_RS02230 PF00410 Ribosomal protein S8 FI878_RS02235 PF00347 Ribosomal protein L6 FI878_RS02240 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FI878_RS02245 PF00333 Ribosomal protein S5, N-terminal domain FI878_RS02245 PF03719 Ribosomal protein S5, C-terminal domain FI878_RS02250 PF00327 Ribosomal protein L30p/L7e FI878_RS02255 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FI878_RS02260 PF00344 SecY translocase FI878_RS02265 PF00444 Ribosomal protein L36 FI878_RS02270 PF00416 Ribosomal protein S13/S18 FI878_RS02275 PF00411 Ribosomal protein S11 FI878_RS02280 PF01479 S4 domain FI878_RS02280 PF00163 Ribosomal protein S4/S9 N-terminal domain FI878_RS02285 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FI878_RS02285 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FI878_RS02285 PF01000 RNA polymerase Rpb3/RpoA insert domain FI878_RS02290 PF01196 Ribosomal protein L17 FI878_RS02295 PF00743 Flavin-binding monooxygenase-like FI878_RS02300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FI878_RS02300 PF02770 Acyl-CoA dehydrogenase, middle domain FI878_RS02300 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FI878_RS02305 PF03937 Flavinator of succinate dehydrogenase FI878_RS02335 PF09526 Probable metal-binding protein (DUF2387) FI878_RS02340 PF01432 Peptidase family M3 FI878_RS02345 PF08461 Ribonuclease R winged-helix domain FI878_RS02345 PF08206 Ribonuclease B OB domain FI878_RS02345 PF00773 RNB domain FI878_RS02345 PF17876 Cold shock domain FI878_RS02345 PF00575 S1 RNA binding domain FI878_RS02390 PF01557 Fumarylacetoacetate (FAA) hydrolase family FI878_RS02395 PF12833 Helix-turn-helix domain FI878_RS02400 PF00892 EamA-like transporter family FI878_RS02405 PF03631 Virulence factor BrkB FI878_RS02410 PF03358 NADPH-dependent FMN reductase FI878_RS02435 PF02130 Uncharacterized protein family UPF0054 FI878_RS02440 PF02562 PhoH-like protein FI878_RS02445 PF04055 Radical SAM superfamily FI878_RS02445 PF01938 TRAM domain FI878_RS02445 PF00919 Uncharacterized protein family UPF0004 FI878_RS02450 PF01464 Transglycosylase SLT domain FI878_RS02450 PF10145 Phage-related minor tail protein FI878_RS02450 PF01551 Peptidase family M23 FI878_RS02460 PF00056 lactate/malate dehydrogenase, NAD binding domain FI878_RS02460 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FI878_RS02480 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ FI878_RS02485 PF01066 CDP-alcohol phosphatidyltransferase FI878_RS02530 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FI878_RS02530 PF02770 Acyl-CoA dehydrogenase, middle domain FI878_RS02530 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FI878_RS02535 PF17932 Tetracyclin repressor-like, C-terminal domain FI878_RS02535 PF00440 Bacterial regulatory proteins, tetR family FI878_RS02550 PF01039 Carboxyl transferase domain FI878_RS02555 PF02770 Acyl-CoA dehydrogenase, middle domain FI878_RS02555 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FI878_RS02555 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FI878_RS02565 PF02785 Biotin carboxylase C-terminal domain FI878_RS02565 PF00289 Biotin carboxylase, N-terminal domain FI878_RS02565 PF00364 Biotin-requiring enzyme FI878_RS02565 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FI878_RS02575 PF04386 Stringent starvation protein B FI878_RS02580 PF00043 Glutathione S-transferase, C-terminal domain FI878_RS02580 PF13417 Glutathione S-transferase, N-terminal domain FI878_RS02585 PF00380 Ribosomal protein S9/S16 FI878_RS02590 PF00572 Ribosomal protein L13 FI878_RS02595 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FI878_RS02600 PF00398 Ribosomal RNA adenine dimethylase FI878_RS02605 PF00149 Calcineurin-like phosphoesterase FI878_RS02625 PF01926 50S ribosome-binding GTPase FI878_RS02625 PF16360 GTP-binding GTPase Middle Region FI878_RS02625 PF13167 GTP-binding GTPase N-terminal FI878_RS02635 PF13091 PLD-like domain FI878_RS02640 PF00149 Calcineurin-like phosphoesterase FI878_RS02640 PF10518 TAT (twin-arginine translocation) pathway signal sequence FI878_RS02645 PF00691 OmpA family FI878_RS02645 PF01389 OmpA-like transmembrane domain FI878_RS02650 PF17152 Periplasmic sensor domain FI878_RS02650 PF00990 Diguanylate cyclase, GGDEF domain FI878_RS02685 PF07992 Pyridine nucleotide-disulphide oxidoreductase FI878_RS02685 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FI878_RS02695 PF04273 Putative phosphatase (DUF442) FI878_RS02695 PF00753 Metallo-beta-lactamase superfamily FI878_RS02700 PF00561 alpha/beta hydrolase fold FI878_RS02705 PF00085 Thioredoxin FI878_RS02710 PF03061 Thioesterase superfamily FI878_RS02720 PF04461 Protein of unknown function (DUF520) FI878_RS02730 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FI878_RS02730 PF01266 FAD dependent oxidoreductase FI878_RS02740 PF03795 YCII-related domain FI878_RS02745 PF04279 Intracellular septation protein A FI878_RS02750 PF02811 PHP domain FI878_RS02755 PF01062 Bestrophin, RFP-TM, chloride channel FI878_RS02760 PF04002 RadC-like JAB domain FI878_RS02765 PF02441 Flavoprotein FI878_RS02765 PF04127 DNA / pantothenate metabolism flavoprotein FI878_RS02770 PF02355 Protein export membrane protein FI878_RS02770 PF07549 SecD/SecF GG Motif FI878_RS02775 PF02355 Protein export membrane protein FI878_RS02775 PF13721 SecD export protein N-terminal TM region FI878_RS02775 PF07549 SecD/SecF GG Motif FI878_RS02780 PF02699 Preprotein translocase subunit FI878_RS02785 PF01702 Queuine tRNA-ribosyltransferase FI878_RS02800 PF02547 Queuosine biosynthesis protein FI878_RS02825 PF07689 KaiB domain FI878_RS02825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FI878_RS02825 PF00512 His Kinase A (phospho-acceptor) domain FI878_RS02830 PF03710 Glutamate-ammonia ligase adenylyltransferase FI878_RS02830 PF08335 GlnD PII-uridylyltransferase FI878_RS02835 PF01063 Amino-transferase class IV FI878_RS02850 PF01522 Polysaccharide deacetylase FI878_RS02855 PF00535 Glycosyl transferase family 2 FI878_RS02860 PF13439 Glycosyltransferase Family 4 FI878_RS02860 PF00534 Glycosyl transferases group 1 FI878_RS02885 PF11380 Stealth protein CR2, conserved region 2 FI878_RS02885 PF17102 Stealth protein CR3, conserved region 3 FI878_RS02885 PF17101 Stealth protein CR1, conserved region 1 FI878_RS02890 PF01336 OB-fold nucleic acid binding domain FI878_RS02890 PF02938 GAD domain FI878_RS02890 PF00152 tRNA synthetases class II (D, K and N) FI878_RS02900 PF12762 ISXO2-like transposase domain FI878_RS02910 PF00593 TonB dependent receptor FI878_RS02910 PF07715 TonB-dependent Receptor Plug Domain FI878_RS02930 PF06146 Phosphate-starvation-inducible E FI878_RS02935 PF00043 Glutathione S-transferase, C-terminal domain FI878_RS02935 PF02798 Glutathione S-transferase, N-terminal domain FI878_RS02940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FI878_RS02940 PF03466 LysR substrate binding domain FI878_RS02945 PF12806 Acetyl-CoA dehydrogenase C-terminal like FI878_RS02945 PF02770 Acyl-CoA dehydrogenase, middle domain FI878_RS02945 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FI878_RS02945 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FI878_RS02950 PF02770 Acyl-CoA dehydrogenase, middle domain FI878_RS02950 PF12806 Acetyl-CoA dehydrogenase C-terminal like FI878_RS02950 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FI878_RS02950 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FI878_RS02960 PF00672 HAMP domain FI878_RS02960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FI878_RS02960 PF00512 His Kinase A (phospho-acceptor) domain FI878_RS02965 PF00486 Transcriptional regulatory protein, C terminal FI878_RS02965 PF00072 Response regulator receiver domain FI878_RS02970 PF02696 Uncharacterized ACR, YdiU/UPF0061 family FI878_RS02990 PF01923 Cobalamin adenosyltransferase FI878_RS02995 PF07715 TonB-dependent Receptor Plug Domain FI878_RS02995 PF00593 TonB dependent receptor FI878_RS03000 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FI878_RS03005 PF00291 Pyridoxal-phosphate dependent enzyme FI878_RS03030 PF00290 Tryptophan synthase alpha chain FI878_RS03035 PF01039 Carboxyl transferase domain FI878_RS03040 PF08245 Mur ligase middle domain FI878_RS03040 PF02875 Mur ligase family, glutamate ligase domain FI878_RS03055 PF00753 Metallo-beta-lactamase superfamily FI878_RS03060 PF00578 AhpC/TSA family FI878_RS03060 PF10417 C-terminal domain of 1-Cys peroxiredoxin FI878_RS03065 PF07516 SecA Wing and Scaffold domain FI878_RS03065 PF02810 SEC-C motif FI878_RS03065 PF01043 SecA preprotein cross-linking domain FI878_RS03065 PF07517 SecA DEAD-like domain FI878_RS03075 PF00083 Sugar (and other) transporter FI878_RS03075 PF07690 Major Facilitator Superfamily FI878_RS03080 PF03006 Haemolysin-III related FI878_RS03110 PF00378 Enoyl-CoA hydratase/isomerase FI878_RS03110 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FI878_RS03110 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FI878_RS03115 PF00108 Thiolase, N-terminal domain FI878_RS03115 PF02803 Thiolase, C-terminal domain FI878_RS03120 PF02311 AraC-like ligand binding domain FI878_RS03120 PF12833 Helix-turn-helix domain FI878_RS03125 PF02515 CoA-transferase family III FI878_RS03130 PF04966 Carbohydrate-selective porin, OprB family FI878_RS03135 PF01011 PQQ enzyme repeat FI878_RS03140 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FI878_RS03140 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FI878_RS03150 PF00893 Small Multidrug Resistance protein FI878_RS03160 PF00108 Thiolase, N-terminal domain FI878_RS03160 PF02803 Thiolase, C-terminal domain FI878_RS03170 PF13505 Outer membrane protein beta-barrel domain FI878_RS03170 PF00691 OmpA family FI878_RS03180 PF01139 tRNA-splicing ligase RtcB FI878_RS03185 PF00324 Amino acid permease FI878_RS03190 PF08468 Methyltransferase small domain N-terminal FI878_RS03190 PF05175 Methyltransferase small domain FI878_RS03195 PF00860 Permease family FI878_RS03205 PF01741 Large-conductance mechanosensitive channel, MscL FI878_RS03220 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FI878_RS03220 PF06827 Zinc finger found in FPG and IleRS FI878_RS03220 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FI878_RS03225 PF02245 Methylpurine-DNA glycosylase (MPG) FI878_RS03230 PF07715 TonB-dependent Receptor Plug Domain FI878_RS03230 PF00593 TonB dependent receptor FI878_RS03235 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FI878_RS03240 PF03547 Membrane transport protein FI878_RS03250 PF13098 Thioredoxin-like domain FI878_RS03250 PF10411 Disulfide bond isomerase protein N-terminus FI878_RS03255 PF01571 Aminomethyltransferase folate-binding domain FI878_RS03265 PF04343 Protein of unknown function, DUF488 FI878_RS03270 PF03831 PhnA domain FI878_RS03270 PF08274 PhnA Zinc-Ribbon FI878_RS03275 PF07411 Domain of unknown function (DUF1508) FI878_RS03280 PF03129 Anticodon binding domain FI878_RS03280 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FI878_RS03280 PF04073 Aminoacyl-tRNA editing domain FI878_RS03285 PF00873 AcrB/AcrD/AcrF family FI878_RS03300 PF00072 Response regulator receiver domain FI878_RS03305 PF00072 Response regulator receiver domain FI878_RS03310 PF01584 CheW-like domain FI878_RS03315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FI878_RS03315 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term FI878_RS03320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FI878_RS03320 PF01584 CheW-like domain FI878_RS03320 PF00072 Response regulator receiver domain FI878_RS03320 PF01627 Hpt domain FI878_RS03330 PF01546 Peptidase family M20/M25/M40 FI878_RS03330 PF07687 Peptidase dimerisation domain FI878_RS03335 PF08085 Entericidin EcnA/B family FI878_RS03345 PF04304 Protein of unknown function (DUF454) FI878_RS03350 PF03734 L,D-transpeptidase catalytic domain FI878_RS03350 PF17969 L,D-transpeptidase C-terminal domain FI878_RS03390 PF00667 FAD binding domain FI878_RS03390 PF00258 Flavodoxin FI878_RS03390 PF00175 Oxidoreductase NAD-binding domain FI878_RS03400 PF12805 FUSC-like inner membrane protein yccS FI878_RS03405 PF07690 Major Facilitator Superfamily FI878_RS03410 PF00881 Nitroreductase family FI878_RS03425 PF01235 Sodium:alanine symporter family FI878_RS03430 PF01734 Patatin-like phospholipase FI878_RS03435 PF13291 ACT domain FI878_RS03435 PF00291 Pyridoxal-phosphate dependent enzyme FI878_RS03440 PF05992 SbmA/BacA-like family FI878_RS03470 PF02637 GatB domain FI878_RS03470 PF02934 GatB/GatE catalytic domain FI878_RS03475 PF01425 Amidase FI878_RS03480 PF02686 Glu-tRNAGln amidotransferase C subunit FI878_RS03490 PF04085 rod shape-determining protein MreC FI878_RS03495 PF04093 rod shape-determining protein MreD FI878_RS03500 PF02545 Maf-like protein FI878_RS03505 PF10150 Ribonuclease E/G family FI878_RS03505 PF00575 S1 RNA binding domain FI878_RS03515 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain FI878_RS03515 PF06974 Protein of unknown function (DUF1298) FI878_RS03520 PF01507 Phosphoadenosine phosphosulfate reductase family FI878_RS03535 PF02525 Flavodoxin-like fold FI878_RS03555 PF02673 Bacitracin resistance protein BacA FI878_RS03560 PF12833 Helix-turn-helix domain FI878_RS03560 PF06719 AraC-type transcriptional regulator N-terminus FI878_RS03565 PF02801 Beta-ketoacyl synthase, C-terminal domain FI878_RS03565 PF08659 KR domain FI878_RS03565 PF00109 Beta-ketoacyl synthase, N-terminal domain FI878_RS03565 PF00550 Phosphopantetheine attachment site FI878_RS03565 PF14765 Polyketide synthase dehydratase FI878_RS03565 PF16197 Ketoacyl-synthetase C-terminal extension FI878_RS03565 PF00698 Acyl transferase domain FI878_RS03565 PF08240 Alcohol dehydrogenase GroES-like domain FI878_RS03565 PF09277 Erythronolide synthase, docking FI878_RS03565 PF08990 Erythronolide synthase docking FI878_RS03570 PF01965 DJ-1/PfpI family FI878_RS03580 PF00324 Amino acid permease FI878_RS03585 PF04303 PrpF protein FI878_RS03590 PF00348 Polyprenyl synthetase FI878_RS03595 PF04237 YjbR FI878_RS03600 PF01145 SPFH domain / Band 7 family FI878_RS03610 PF01734 Patatin-like phospholipase FI878_RS03630 PF08019 Phosphoethanolamine transferase EptA/EptB FI878_RS03630 PF00884 Sulfatase FI878_RS03635 PF00486 Transcriptional regulatory protein, C terminal FI878_RS03635 PF00072 Response regulator receiver domain FI878_RS03640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FI878_RS03640 PF08521 Two-component sensor kinase N-terminal FI878_RS03640 PF00512 His Kinase A (phospho-acceptor) domain FI878_RS03650 PF00909 Ammonium Transporter Family FI878_RS03655 PF03466 LysR substrate binding domain FI878_RS03655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FI878_RS03675 PF00133 tRNA synthetases class I (I, L, M and V) FI878_RS03675 PF10458 Valyl tRNA synthetase tRNA binding arm FI878_RS03675 PF08264 Anticodon-binding domain of tRNA FI878_RS03695 PF01906 Putative heavy-metal-binding FI878_RS03700 PF01906 Putative heavy-metal-binding FI878_RS03705 PF02321 Outer membrane efflux protein FI878_RS03710 PF00873 AcrB/AcrD/AcrF family FI878_RS03715 PF00529 HlyD membrane-fusion protein of T1SS FI878_RS03715 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FI878_RS03720 PF01569 PAP2 superfamily FI878_RS03730 PF00348 Polyprenyl synthetase FI878_RS03740 PF00829 Ribosomal prokaryotic L21 protein FI878_RS03745 PF01016 Ribosomal L27 protein FI878_RS03750 PF03548 Outer membrane lipoprotein carrier protein LolA FI878_RS03760 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FI878_RS03760 PF02403 Seryl-tRNA synthetase N-terminal domain FI878_RS03765 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FI878_RS03765 PF14824 Sirohaem biosynthesis protein central FI878_RS03765 PF10414 Sirohaem synthase dimerisation region FI878_RS03770 PF00588 SpoU rRNA Methylase family FI878_RS03775 PF01638 HxlR-like helix-turn-helix FI878_RS03780 PF03358 NADPH-dependent FMN reductase FI878_RS03785 PF13520 Amino acid permease FI878_RS03790 PF00465 Iron-containing alcohol dehydrogenase FI878_RS03800 PF03099 Biotin/lipoate A/B protein ligase family FI878_RS03805 PF04359 Protein of unknown function (DUF493) FI878_RS03810 PF04545 Sigma-70, region 4 FI878_RS03810 PF04539 Sigma-70 region 3 FI878_RS03810 PF04546 Sigma-70, non-essential region FI878_RS03810 PF04542 Sigma-70 region 2 FI878_RS03810 PF03979 Sigma-70 factor, region 1.1 FI878_RS03810 PF00140 Sigma-70 factor, region 1.2 FI878_RS03840 PF00285 Citrate synthase, C-terminal domain FI878_RS03845 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FI878_RS03850 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FI878_RS03855 PF02910 Fumarate reductase flavoprotein C-term FI878_RS03855 PF00890 FAD binding domain FI878_RS03860 PF13085 2Fe-2S iron-sulfur cluster binding domain FI878_RS03875 PF02779 Transketolase, pyrimidine binding domain FI878_RS03875 PF00676 Dehydrogenase E1 component FI878_RS03875 PF16078 2-oxoglutarate dehydrogenase N-terminus FI878_RS03875 PF16870 2-oxoglutarate dehydrogenase C-terminal FI878_RS03880 PF02817 e3 binding domain FI878_RS03880 PF00364 Biotin-requiring enzyme FI878_RS03880 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FI878_RS03885 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FI878_RS03885 PF07992 Pyridine nucleotide-disulphide oxidoreductase FI878_RS03890 PF00549 CoA-ligase FI878_RS03890 PF08442 ATP-grasp domain FI878_RS03895 PF02629 CoA binding domain FI878_RS03895 PF00549 CoA-ligase FI878_RS03900 PF00579 tRNA synthetases class I (W and Y) FI878_RS03905 PF05661 Protein of unknown function (DUF808) FI878_RS03910 PF04228 Putative neutral zinc metallopeptidase FI878_RS03915 PF00999 Sodium/hydrogen exchanger family FI878_RS03940 PF09587 Bacterial capsule synthesis protein PGA_cap FI878_RS03950 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FI878_RS03955 PF00582 Universal stress protein family FI878_RS03960 PF00132 Bacterial transferase hexapeptide (six repeats) FI878_RS03965 PF01272 Transcription elongation factor, GreA/GreB, C-term FI878_RS03965 PF03449 Transcription elongation factor, N-terminal FI878_RS03970 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FI878_RS03970 PF02142 MGS-like domain FI878_RS03970 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FI878_RS03975 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FI878_RS03975 PF00117 Glutamine amidotransferase class-I FI878_RS03990 PF01985 CRS1 / YhbY (CRM) domain FI878_RS03995 PF01728 FtsJ-like methyltransferase FI878_RS04000 PF01434 Peptidase family M41 FI878_RS04000 PF06480 FtsH Extracellular FI878_RS04000 PF17862 AAA+ lid domain FI878_RS04000 PF00004 ATPase family associated with various cellular activities (AAA) FI878_RS04005 PF00809 Pterin binding enzyme FI878_RS04025 PF09423 PhoD-like phosphatase FI878_RS04025 PF16655 PhoD-like phosphatase, N-terminal domain FI878_RS04040 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FI878_RS04040 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FI878_RS04055 PF00083 Sugar (and other) transporter FI878_RS04065 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FI878_RS04065 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FI878_RS04070 PF01266 FAD dependent oxidoreductase FI878_RS04070 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FI878_RS04075 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain FI878_RS04075 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain FI878_RS04080 PF00781 Diacylglycerol kinase catalytic domain FI878_RS04085 PF00149 Calcineurin-like phosphoesterase FI878_RS04095 PF00166 Chaperonin 10 Kd subunit FI878_RS04100 PF00118 TCP-1/cpn60 chaperonin family FI878_RS04105 PF01219 Prokaryotic diacylglycerol kinase FI878_RS04110 PF00753 Metallo-beta-lactamase superfamily FI878_RS04115 PF03009 Glycerophosphoryl diester phosphodiesterase family FI878_RS04120 PF00873 AcrB/AcrD/AcrF family FI878_RS04130 PF01435 Peptidase family M48 FI878_RS04135 PF01464 Transglycosylase SLT domain FI878_RS04140 PF01171 PP-loop family FI878_RS04150 PF00497 Bacterial extracellular solute-binding proteins, family 3 FI878_RS04150 PF01464 Transglycosylase SLT domain FI878_RS04155 PF03449 Transcription elongation factor, N-terminal FI878_RS04155 PF01272 Transcription elongation factor, GreA/GreB, C-term FI878_RS04170 PF00550 Phosphopantetheine attachment site FI878_RS04170 PF00501 AMP-binding enzyme FI878_RS04170 PF13193 AMP-binding enzyme C-terminal domain FI878_RS04170 PF00668 Condensation domain FI878_RS04170 PF00975 Thioesterase domain FI878_RS04195 PF00881 Nitroreductase family FI878_RS04210 PF02595 Glycerate kinase family FI878_RS04215 PF00384 Molybdopterin oxidoreductase FI878_RS04220 PF02634 FdhD/NarQ family FI878_RS04225 PF06803 Protein of unknown function (DUF1232) FI878_RS04230 PF11890 Domain of unknown function (DUF3410) FI878_RS04230 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FI878_RS04230 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FI878_RS04235 PF00152 tRNA synthetases class II (D, K and N) FI878_RS04245 PF18073 Rubredoxin metal binding domain FI878_RS04250 PF00324 Amino acid permease FI878_RS04260 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FI878_RS04260 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FI878_RS04265 PF01678 Diaminopimelate epimerase FI878_RS04270 PF01810 LysE type translocator FI878_RS04275 PF00589 Phage integrase family FI878_RS04275 PF02899 Phage integrase, N-terminal SAM-like domain FI878_RS04280 PF12762 ISXO2-like transposase domain FI878_RS04285 PF01012 Electron transfer flavoprotein domain FI878_RS04290 PF01012 Electron transfer flavoprotein domain FI878_RS04290 PF00766 Electron transfer flavoprotein FAD-binding domain FI878_RS04295 PF00521 DNA gyrase/topoisomerase IV, subunit A FI878_RS04295 PF03989 DNA gyrase C-terminal domain, beta-propeller FI878_RS04320 PF00535 Glycosyl transferase family 2 FI878_RS04340 PF13533 Biotin-lipoyl like FI878_RS04350 PF00266 Aminotransferase class-V FI878_RS04365 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 FI878_RS04375 PF12704 MacB-like periplasmic core domain FI878_RS04375 PF02687 FtsX-like permease family FI878_RS04380 PF00005 ABC transporter FI878_RS04385 PF13567 Domain of unknown function (DUF4131) FI878_RS04385 PF03772 Competence protein FI878_RS04385 PF00753 Metallo-beta-lactamase superfamily FI878_RS04395 PF06965 Na+/H+ antiporter 1 FI878_RS04395 PF01343 Peptidase family S49 FI878_RS04400 PF12697 Alpha/beta hydrolase family FI878_RS04405 PF00551 Formyl transferase FI878_RS04410 PF00586 AIR synthase related protein, N-terminal domain FI878_RS04410 PF02769 AIR synthase related protein, C-terminal domain FI878_RS04415 PF01594 AI-2E family transporter FI878_RS04420 PF11638 DnaA N-terminal domain FI878_RS04420 PF08299 Bacterial dnaA protein helix-turn-helix FI878_RS04420 PF00308 Bacterial dnaA protein FI878_RS04450 PF00588 SpoU rRNA Methylase family FI878_RS04450 PF08032 RNA 2'-O ribose methyltransferase substrate binding FI878_RS04455 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain FI878_RS04465 PF00691 OmpA family FI878_RS04470 PF04052 TolB amino-terminal domain FI878_RS04470 PF07676 WD40-like Beta Propeller Repeat FI878_RS04480 PF02472 Biopolymer transport protein ExbD/TolR FI878_RS04485 PF01618 MotA/TolQ/ExbB proton channel family FI878_RS04490 PF03061 Thioesterase superfamily FI878_RS04495 PF07687 Peptidase dimerisation domain FI878_RS04495 PF01546 Peptidase family M20/M25/M40 FI878_RS04500 PF05491 RuvB C-terminal winged helix domain FI878_RS04500 PF17864 RuvB AAA lid domain FI878_RS04500 PF05496 Holliday junction DNA helicase RuvB P-loop domain FI878_RS04505 PF01330 RuvA N terminal domain FI878_RS04505 PF07499 RuvA, C-terminal domain FI878_RS04510 PF01966 HD domain FI878_RS04515 PF02769 AIR synthase related protein, C-terminal domain FI878_RS04515 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FI878_RS04515 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal FI878_RS04520 PF07690 Major Facilitator Superfamily FI878_RS04525 PF01784 NIF3 (NGG1p interacting factor 3) FI878_RS04530 PF00378 Enoyl-CoA hydratase/isomerase FI878_RS04535 PF00293 NUDIX domain FI878_RS04535 PF01467 Cytidylyltransferase-like FI878_RS04545 PF00578 AhpC/TSA family FI878_RS04560 PF06508 Queuosine biosynthesis protein QueC FI878_RS04570 PF00132 Bacterial transferase hexapeptide (six repeats) FI878_RS04570 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal FI878_RS04570 PF14602 Hexapeptide repeat of succinyl-transferase FI878_RS04580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FI878_RS04580 PF03466 LysR substrate binding domain FI878_RS04585 PF00005 ABC transporter FI878_RS04585 PF12857 TOBE-like domain FI878_RS04590 PF00528 Binding-protein-dependent transport system inner membrane component FI878_RS04595 PF00528 Binding-protein-dependent transport system inner membrane component FI878_RS04610 PF01063 Amino-transferase class IV FI878_RS04615 PF02618 YceG-like family FI878_RS04620 PF02223 Thymidylate kinase FI878_RS04630 PF02910 Fumarate reductase flavoprotein C-term FI878_RS04630 PF00890 FAD binding domain FI878_RS04635 PF13180 PDZ domain FI878_RS04645 PF03144 Elongation factor Tu domain 2 FI878_RS04645 PF00009 Elongation factor Tu GTP binding domain FI878_RS04645 PF06421 GTP-binding protein LepA C-terminus FI878_RS04645 PF00679 Elongation factor G C-terminus FI878_RS04650 PF10502 Signal peptidase, peptidase S26 FI878_RS04660 PF14622 Ribonuclease-III-like FI878_RS04660 PF00035 Double-stranded RNA binding motif FI878_RS04665 PF01926 50S ribosome-binding GTPase FI878_RS04665 PF07650 KH domain FI878_RS04675 PF02565 Recombination protein O C terminal FI878_RS04675 PF11967 Recombination protein O N terminal FI878_RS04680 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ FI878_RS04685 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) FI878_RS04690 PF00106 short chain dehydrogenase FI878_RS04720 PF00155 Aminotransferase class I and II FI878_RS04730 PF00990 Diguanylate cyclase, GGDEF domain FI878_RS04730 PF17151 Periplasmic sensor domain FI878_RS04740 PF02151 UvrB/uvrC motif FI878_RS04740 PF12344 Ultra-violet resistance protein B FI878_RS04740 PF17757 UvrB interaction domain FI878_RS04740 PF04851 Type III restriction enzyme, res subunit FI878_RS04740 PF00271 Helicase conserved C-terminal domain FI878_RS04750 PF00892 EamA-like transporter family FI878_RS04755 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FI878_RS04755 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FI878_RS04770 PF01926 50S ribosome-binding GTPase FI878_RS04770 PF01018 GTP1/OBG FI878_RS04775 PF01472 PUA domain FI878_RS04775 PF00696 Amino acid kinase family FI878_RS04785 PF07759 Protein of unknown function (DUF1615) FI878_RS04790 PF01207 Dihydrouridine synthase (Dus) FI878_RS04795 PF03060 Nitronate monooxygenase FI878_RS04810 PF02350 UDP-N-acetylglucosamine 2-epimerase FI878_RS04840 PF03441 FAD binding domain of DNA photolyase FI878_RS04840 PF00875 DNA photolyase FI878_RS04845 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FI878_RS04850 PF07992 Pyridine nucleotide-disulphide oxidoreductase FI878_RS04855 PF07943 Penicillin-binding protein 5, C-terminal domain FI878_RS04855 PF00768 D-alanyl-D-alanine carboxypeptidase FI878_RS04865 PF03971 Monomeric isocitrate dehydrogenase FI878_RS04870 PF00849 RNA pseudouridylate synthase FI878_RS04875 PF00180 Isocitrate/isopropylmalate dehydrogenase FI878_RS04895 PF06779 Uncharacterised MFS-type transporter YbfB FI878_RS04900 PF03466 LysR substrate binding domain FI878_RS04900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FI878_RS04910 PF02567 Phenazine biosynthesis-like protein FI878_RS04915 PF00675 Insulinase (Peptidase family M16) FI878_RS04915 PF05193 Peptidase M16 inactive domain FI878_RS04940 PF02581 Thiamine monophosphate synthase FI878_RS04945 PF00202 Aminotransferase class-III FI878_RS04955 PF00849 RNA pseudouridylate synthase FI878_RS04960 PF00176 SNF2 family N-terminal domain FI878_RS04960 PF18337 RapA N-terminal Tudor like domain FI878_RS04960 PF00271 Helicase conserved C-terminal domain FI878_RS04960 PF12137 RNA polymerase recycling family C-terminal FI878_RS04960 PF18339 RapA N-terminal Tudor like domain 1 FI878_RS04970 PF00440 Bacterial regulatory proteins, tetR family FI878_RS04975 PF00111 2Fe-2S iron-sulfur cluster binding domain FI878_RS04975 PF00970 Oxidoreductase FAD-binding domain FI878_RS04975 PF00175 Oxidoreductase NAD-binding domain FI878_RS04980 PF00487 Fatty acid desaturase FI878_RS04990 PF00440 Bacterial regulatory proteins, tetR family FI878_RS04990 PF17754 MftR C-terminal domain FI878_RS05000 PF00202 Aminotransferase class-III FI878_RS05005 PF00282 Pyridoxal-dependent decarboxylase conserved domain FI878_RS05010 PF00171 Aldehyde dehydrogenase family FI878_RS05015 PF01037 Lrp/AsnC ligand binding domain FI878_RS05020 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FI878_RS05020 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FI878_RS05020 PF00205 Thiamine pyrophosphate enzyme, central domain FI878_RS05025 PF00324 Amino acid permease FI878_RS05030 PF12849 PBP superfamily domain FI878_RS05035 PF00528 Binding-protein-dependent transport system inner membrane component FI878_RS05040 PF00528 Binding-protein-dependent transport system inner membrane component FI878_RS05045 PF00005 ABC transporter FI878_RS05050 PF08496 Peptidase family S49 N-terminal FI878_RS05050 PF01343 Peptidase family S49 FI878_RS05065 PF00206 Lyase FI878_RS05065 PF08328 Adenylosuccinate lyase C-terminal FI878_RS05070 PF04356 Protein of unknown function (DUF489) FI878_RS05080 PF00293 NUDIX domain FI878_RS05080 PF13344 Haloacid dehalogenase-like hydrolase FI878_RS05085 PF00132 Bacterial transferase hexapeptide (six repeats) FI878_RS05090 PF12762 ISXO2-like transposase domain FI878_RS05095 PF00768 D-alanyl-D-alanine carboxypeptidase FI878_RS05095 PF07943 Penicillin-binding protein 5, C-terminal domain FI878_RS05110 PF01975 Survival protein SurE FI878_RS05115 PF01551 Peptidase family M23 FI878_RS05115 PF01476 LysM domain FI878_RS05120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FI878_RS05120 PF03466 LysR substrate binding domain FI878_RS05125 PF13654 AAA domain FI878_RS05125 PF05362 Lon protease (S16) C-terminal proteolytic domain FI878_RS05130 PF07690 Major Facilitator Superfamily FI878_RS05135 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FI878_RS05140 PF13593 SBF-like CPA transporter family (DUF4137) FI878_RS05145 PF01197 Ribosomal protein L31 FI878_RS05160 PF04055 Radical SAM superfamily FI878_RS05165 PF09285 Elongation factor P, C-terminal FI878_RS05165 PF01132 Elongation factor P (EF-P) OB domain FI878_RS05165 PF08207 Elongation factor P (EF-P) KOW-like domain FI878_RS05170 PF02554 Carbon starvation protein CstA FI878_RS05170 PF13722 5TM C-terminal transporter carbon starvation CstA FI878_RS05175 PF04328 Selenoprotein, putative FI878_RS05185 PF00589 Phage integrase family FI878_RS05225 PF01381 Helix-turn-helix FI878_RS05225 PF00717 Peptidase S24-like FI878_RS05275 PF03354 Phage Terminase FI878_RS05290 PF12762 ISXO2-like transposase domain FI878_RS05350 PF01464 Transglycosylase SLT domain FI878_RS05350 PF00497 Bacterial extracellular solute-binding proteins, family 3 FI878_RS05430 PF06018 CodY GAF-like domain FI878_RS05430 PF17853 GGDEF-like domain FI878_RS05430 PF13556 PucR C-terminal helix-turn-helix domain FI878_RS05445 PF00171 Aldehyde dehydrogenase family FI878_RS05450 PF00324 Amino acid permease FI878_RS05455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FI878_RS05455 PF03466 LysR substrate binding domain FI878_RS05460 PF02028 BCCT, betaine/carnitine/choline family transporter FI878_RS05465 PF02028 BCCT, betaine/carnitine/choline family transporter FI878_RS05470 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FI878_RS05470 PF00355 Rieske [2Fe-2S] domain FI878_RS05475 PF00171 Aldehyde dehydrogenase family FI878_RS05480 PF07992 Pyridine nucleotide-disulphide oxidoreductase FI878_RS05480 PF18113 Rubredoxin binding C-terminal domain FI878_RS05485 PF01266 FAD dependent oxidoreductase FI878_RS05485 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FI878_RS05505 PF00892 EamA-like transporter family FI878_RS05515 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system FI878_RS05520 PF00083 Sugar (and other) transporter FI878_RS05525 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FI878_RS05525 PF13378 Enolase C-terminal domain-like FI878_RS05530 PF00698 Acyl transferase domain FI878_RS05530 PF14765 Polyketide synthase dehydratase FI878_RS05530 PF00550 Phosphopantetheine attachment site FI878_RS05530 PF08659 KR domain FI878_RS05530 PF00109 Beta-ketoacyl synthase, N-terminal domain FI878_RS05530 PF16197 Ketoacyl-synthetase C-terminal extension FI878_RS05530 PF09277 Erythronolide synthase, docking FI878_RS05530 PF08990 Erythronolide synthase docking FI878_RS05530 PF08240 Alcohol dehydrogenase GroES-like domain FI878_RS05530 PF02801 Beta-ketoacyl synthase, C-terminal domain FI878_RS05535 PF00440 Bacterial regulatory proteins, tetR family FI878_RS05555 PF17954 Quercetinase C-terminal cupin domain FI878_RS05555 PF02678 Pirin FI878_RS05565 PF08348 YheO-like PAS domain FI878_RS05565 PF13309 HTH domain FI878_RS05575 PF00550 Phosphopantetheine attachment site FI878_RS05575 PF00501 AMP-binding enzyme FI878_RS05575 PF13193 AMP-binding enzyme C-terminal domain FI878_RS05575 PF00668 Condensation domain FI878_RS05580 PF00501 AMP-binding enzyme FI878_RS05580 PF00668 Condensation domain FI878_RS05580 PF00550 Phosphopantetheine attachment site FI878_RS05580 PF00975 Thioesterase domain FI878_RS05580 PF13193 AMP-binding enzyme C-terminal domain FI878_RS05585 PF01032 FecCD transport family FI878_RS05590 PF01032 FecCD transport family FI878_RS05595 PF00005 ABC transporter FI878_RS05600 PF01497 Periplasmic binding protein FI878_RS05605 PF07715 TonB-dependent Receptor Plug Domain FI878_RS05605 PF00593 TonB dependent receptor FI878_RS05610 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) FI878_RS05615 PF00501 AMP-binding enzyme FI878_RS05615 PF00668 Condensation domain FI878_RS05615 PF00550 Phosphopantetheine attachment site FI878_RS05620 PF00501 AMP-binding enzyme FI878_RS05620 PF13193 AMP-binding enzyme C-terminal domain FI878_RS05625 PF00550 Phosphopantetheine attachment site FI878_RS05625 PF00857 Isochorismatase family FI878_RS05630 PF00282 Pyridoxal-dependent decarboxylase conserved domain FI878_RS05640 PF00005 ABC transporter FI878_RS05640 PF00664 ABC transporter transmembrane region FI878_RS05645 PF00664 ABC transporter transmembrane region FI878_RS05645 PF00005 ABC transporter FI878_RS05650 PF00975 Thioesterase domain FI878_RS05660 PF00425 chorismate binding enzyme FI878_RS05670 PF01208 Uroporphyrinogen decarboxylase (URO-D) FI878_RS05675 PF05675 Protein of unknown function (DUF817) FI878_RS05690 PF00144 Beta-lactamase FI878_RS05705 PF01799 [2Fe-2S] binding domain FI878_RS05705 PF00111 2Fe-2S iron-sulfur cluster binding domain FI878_RS05710 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FI878_RS05710 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FI878_RS05725 PF00218 Indole-3-glycerol phosphate synthase FI878_RS05730 PF00591 Glycosyl transferase family, a/b domain FI878_RS05730 PF02885 Glycosyl transferase family, helical bundle domain FI878_RS05735 PF07715 TonB-dependent Receptor Plug Domain FI878_RS05735 PF00593 TonB dependent receptor FI878_RS05740 PF01433 Peptidase family M1 domain FI878_RS05740 PF11838 ERAP1-like C-terminal domain FI878_RS05745 PF00117 Glutamine amidotransferase class-I FI878_RS05845 PF00772 DnaB-like helicase N terminal domain FI878_RS05845 PF03796 DnaB-like helicase C terminal domain FI878_RS06030 PF08525 Opacity-associated protein A N-terminal motif FI878_RS06030 PF01476 LysM domain FI878_RS06030 PF01551 Peptidase family M23 FI878_RS06145 PF00120 Glutamine synthetase, catalytic domain FI878_RS06145 PF03951 Glutamine synthetase, beta-Grasp domain FI878_RS06150 PF04345 Chorismate lyase FI878_RS06155 PF01040 UbiA prenyltransferase family FI878_RS06190 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FI878_RS06190 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FI878_RS06195 PF01784 NIF3 (NGG1p interacting factor 3) FI878_RS06200 PF13180 PDZ domain FI878_RS06205 PF01743 Poly A polymerase head domain FI878_RS06205 PF12627 Probable RNA and SrmB- binding site of polymerase A FI878_RS06210 PF01515 Phosphate acetyl/butaryl transferase FI878_RS06210 PF03949 Malic enzyme, NAD binding domain FI878_RS06210 PF00390 Malic enzyme, N-terminal domain FI878_RS06215 PF00990 Diguanylate cyclase, GGDEF domain FI878_RS06215 PF00563 EAL domain FI878_RS06215 PF03707 Bacterial signalling protein N terminal repeat FI878_RS06220 PF04452 RNA methyltransferase FI878_RS06225 PF02219 Methylenetetrahydrofolate reductase FI878_RS06230 PF05221 S-adenosyl-L-homocysteine hydrolase FI878_RS06230 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain FI878_RS06245 PF09317 Domain of unknown function (DUF1974) FI878_RS06245 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FI878_RS06245 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FI878_RS06250 PF04055 Radical SAM superfamily FI878_RS06255 PF07992 Pyridine nucleotide-disulphide oxidoreductase FI878_RS06255 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FI878_RS06265 PF07690 Major Facilitator Superfamily FI878_RS06275 PF00557 Metallopeptidase family M24 FI878_RS06280 PF00318 Ribosomal protein S2 FI878_RS06285 PF00889 Elongation factor TS FI878_RS06295 PF12833 Helix-turn-helix domain FI878_RS06315 PF05036 Sporulation related domain FI878_RS06315 PF03330 Lytic transglycolase FI878_RS06320 PF13406 Transglycosylase SLT domain FI878_RS06325 PF01098 Cell cycle protein FI878_RS06335 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term FI878_RS06335 PF14489 QueF-like protein FI878_RS06340 PF01061 ABC-2 type transporter FI878_RS06345 PF00005 ABC transporter FI878_RS06375 PF00464 Serine hydroxymethyltransferase FI878_RS06380 PF02321 Outer membrane efflux protein FI878_RS06385 PF00873 AcrB/AcrD/AcrF family FI878_RS06390 PF13533 Biotin-lipoyl like FI878_RS06395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FI878_RS06395 PF03466 LysR substrate binding domain FI878_RS06400 PF00497 Bacterial extracellular solute-binding proteins, family 3 FI878_RS06405 PF00528 Binding-protein-dependent transport system inner membrane component FI878_RS06410 PF00528 Binding-protein-dependent transport system inner membrane component FI878_RS06415 PF00005 ABC transporter FI878_RS06420 PF00893 Small Multidrug Resistance protein FI878_RS06425 PF00037 4Fe-4S binding domain FI878_RS06435 PF00155 Aminotransferase class I and II FI878_RS06435 PF00392 Bacterial regulatory proteins, gntR family FI878_RS06440 PF02567 Phenazine biosynthesis-like protein FI878_RS06445 PF00175 Oxidoreductase NAD-binding domain FI878_RS06445 PF00970 Oxidoreductase FAD-binding domain FI878_RS06450 PF18389 TrmO C-terminal domain FI878_RS06450 PF01980 tRNA-methyltransferase O FI878_RS06460 PF00437 Type II/IV secretion system protein FI878_RS06470 PF00486 Transcriptional regulatory protein, C terminal FI878_RS06470 PF00072 Response regulator receiver domain FI878_RS06475 PF00512 His Kinase A (phospho-acceptor) domain FI878_RS06475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FI878_RS06475 PF08521 Two-component sensor kinase N-terminal FI878_RS06485 PF00293 NUDIX domain FI878_RS06495 PF14814 Bifunctional transglycosylase second domain FI878_RS06495 PF00905 Penicillin binding protein transpeptidase domain FI878_RS06495 PF00912 Transglycosylase FI878_RS06500 PF01513 ATP-NAD kinase FI878_RS06505 PF07023 Protein of unknown function (DUF1315) FI878_RS06510 PF00591 Glycosyl transferase family, a/b domain FI878_RS06510 PF02885 Glycosyl transferase family, helical bundle domain FI878_RS06515 PF00375 Sodium:dicarboxylate symporter family FI878_RS06520 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FI878_RS06520 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FI878_RS06520 PF02770 Acyl-CoA dehydrogenase, middle domain FI878_RS06525 PF00756 Putative esterase FI878_RS06530 PF00800 Prephenate dehydratase FI878_RS06530 PF01817 Chorismate mutase type II FI878_RS06530 PF01842 ACT domain FI878_RS06535 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FI878_RS06545 PF07687 Peptidase dimerisation domain FI878_RS06545 PF01546 Peptidase family M20/M25/M40 FI878_RS06550 PF12706 Beta-lactamase superfamily domain FI878_RS06565 PF03883 Peroxide stress protein YaaA FI878_RS06575 PF05690 Thiazole biosynthesis protein ThiG FI878_RS06585 PF04241 Protein of unknown function (DUF423) FI878_RS06590 PF00140 Sigma-70 factor, region 1.2 FI878_RS06590 PF04542 Sigma-70 region 2 FI878_RS06590 PF04545 Sigma-70, region 4 FI878_RS06600 PF00313 'Cold-shock' DNA-binding domain FI878_RS06605 PF00271 Helicase conserved C-terminal domain FI878_RS06605 PF00270 DEAD/DEAH box helicase FI878_RS06615 PF00881 Nitroreductase family FI878_RS06620 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FI878_RS06620 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FI878_RS06640 PF01180 Dihydroorotate dehydrogenase FI878_RS06645 PF02674 Colicin V production protein FI878_RS06650 PF00156 Phosphoribosyl transferase domain FI878_RS06665 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FI878_RS06665 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FI878_RS06670 PF01435 Peptidase family M48 FI878_RS06675 PF09424 Yqey-like protein FI878_RS06680 PF01165 Ribosomal protein S21 FI878_RS06685 PF00814 Glycoprotease family FI878_RS06705 PF00069 Protein kinase domain FI878_RS06730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FI878_RS06730 PF03466 LysR substrate binding domain FI878_RS06735 PF00202 Aminotransferase class-III FI878_RS06740 PF00171 Aldehyde dehydrogenase family FI878_RS06745 PF00324 Amino acid permease FI878_RS06775 PF04076 Bacterial OB fold (BOF) protein FI878_RS06850 PF00155 Aminotransferase class I and II FI878_RS06855 PF02080 TrkA-C domain FI878_RS06855 PF06826 Predicted Permease Membrane Region FI878_RS06860 PF12762 ISXO2-like transposase domain FI878_RS06870 PF04403 Paraquat-inducible protein A FI878_RS06875 PF02470 MlaD protein FI878_RS06885 PF01177 Asp/Glu/Hydantoin racemase FI878_RS06895 PF12762 ISXO2-like transposase domain FI878_RS06905 PF07995 Glucose / Sorbosone dehydrogenase FI878_RS06925 PF00375 Sodium:dicarboxylate symporter family FI878_RS06935 PF16123 Hydroxyacylglutathione hydrolase C-terminus FI878_RS06935 PF00753 Metallo-beta-lactamase superfamily FI878_RS06940 PF00528 Binding-protein-dependent transport system inner membrane component FI878_RS06945 PF00005 ABC transporter FI878_RS06945 PF09383 NIL domain FI878_RS06950 PF03180 NLPA lipoprotein FI878_RS06955 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FI878_RS06955 PF02843 Phosphoribosylglycinamide synthetase, C domain FI878_RS06955 PF02844 Phosphoribosylglycinamide synthetase, N domain FI878_RS06960 PF02142 MGS-like domain FI878_RS06960 PF01808 AICARFT/IMPCHase bienzyme FI878_RS06965 PF02954 Bacterial regulatory protein, Fis family FI878_RS06985 PF01134 Glucose inhibited division protein A FI878_RS06985 PF13932 GidA associated domain FI878_RS06995 PF14403 Circularly permuted ATP-grasp type 2 FI878_RS07005 PF08379 Bacterial transglutaminase-like N-terminal region FI878_RS07005 PF01841 Transglutaminase-like superfamily FI878_RS07015 PF00842 Alanine racemase, C-terminal domain FI878_RS07015 PF01168 Alanine racemase, N-terminal domain FI878_RS07020 PF00772 DnaB-like helicase N terminal domain FI878_RS07020 PF03796 DnaB-like helicase C terminal domain FI878_RS07025 PF03948 Ribosomal protein L9, C-terminal domain FI878_RS07025 PF01281 Ribosomal protein L9, N-terminal domain FI878_RS07030 PF01084 Ribosomal protein S18 FI878_RS07035 PF01250 Ribosomal protein S6 FI878_RS07040 PF01040 UbiA prenyltransferase family FI878_RS07045 PF03626 Prokaryotic Cytochrome C oxidase subunit IV FI878_RS07050 PF00510 Cytochrome c oxidase subunit III FI878_RS07055 PF00115 Cytochrome C and Quinol oxidase polypeptide I FI878_RS07060 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FI878_RS07060 PF06481 COX Aromatic Rich Motif FI878_RS07070 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FI878_RS07070 PF02896 PEP-utilising enzyme, TIM barrel domain FI878_RS07070 PF00391 PEP-utilising enzyme, mobile domain FI878_RS07075 PF03618 Kinase/pyrophosphorylase FI878_RS07085 PF01522 Polysaccharide deacetylase FI878_RS07085 PF14883 Hypothetical glycosyl hydrolase family 13 FI878_RS07090 PF00535 Glycosyl transferase family 2 FI878_RS07095 PF13994 PgaD-like protein FI878_RS07105 PF00296 Luciferase-like monooxygenase FI878_RS07120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FI878_RS07120 PF03466 LysR substrate binding domain FI878_RS07130 PF00472 RF-1 domain FI878_RS07130 PF03462 PCRF domain FI878_RS07135 PF17827 PrmC N-terminal domain FI878_RS07135 PF13847 Methyltransferase domain FI878_RS07140 PF00528 Binding-protein-dependent transport system inner membrane component FI878_RS07145 PF09084 NMT1/THI5 like FI878_RS07150 PF12833 Helix-turn-helix domain FI878_RS07155 PF00106 short chain dehydrogenase FI878_RS07160 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FI878_RS07160 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FI878_RS07160 PF02770 Acyl-CoA dehydrogenase, middle domain FI878_RS07165 PF13193 AMP-binding enzyme C-terminal domain FI878_RS07165 PF00501 AMP-binding enzyme FI878_RS07170 PF01613 Flavin reductase like domain FI878_RS07175 PF00899 ThiF family FI878_RS07180 PF03109 ABC1 family FI878_RS07195 PF03814 Potassium-transporting ATPase A subunit FI878_RS07205 PF02669 K+-transporting ATPase, c chain FI878_RS07210 PF13493 Domain of unknown function (DUF4118) FI878_RS07210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FI878_RS07210 PF02702 Osmosensitive K+ channel His kinase sensor domain FI878_RS07210 PF00512 His Kinase A (phospho-acceptor) domain FI878_RS07215 PF00072 Response regulator receiver domain FI878_RS07215 PF00486 Transcriptional regulatory protein, C terminal FI878_RS07220 PF00120 Glutamine synthetase, catalytic domain FI878_RS07225 PF12762 ISXO2-like transposase domain FI878_RS07235 PF03232 Ubiquinone biosynthesis protein COQ7 FI878_RS07240 PF07690 Major Facilitator Superfamily FI878_RS07245 PF17243 POTRA domain TamA domain 1 FI878_RS07245 PF07244 Surface antigen variable number repeat FI878_RS07245 PF01103 Surface antigen FI878_RS07260 PF06434 Aconitate hydratase 2 N-terminus FI878_RS07260 PF00330 Aconitase family (aconitate hydratase) FI878_RS07260 PF11791 Aconitate B N-terminal domain FI878_RS07270 PF00027 Cyclic nucleotide-binding domain FI878_RS07270 PF00520 Ion transport protein FI878_RS07275 PF07690 Major Facilitator Superfamily FI878_RS07290 PF03466 LysR substrate binding domain FI878_RS07290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FI878_RS07295 PF04284 Protein of unknown function (DUF441) FI878_RS07305 PF12762 ISXO2-like transposase domain FI878_RS07310 PF00849 RNA pseudouridylate synthase FI878_RS07310 PF01479 S4 domain FI878_RS07325 PF01479 S4 domain FI878_RS07325 PF00849 RNA pseudouridylate synthase FI878_RS07330 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE FI878_RS07335 PF08676 MutL C terminal dimerisation domain FI878_RS07335 PF01119 DNA mismatch repair protein, C-terminal domain FI878_RS07345 PF17209 Hfq protein FI878_RS07355 PF00881 Nitroreductase family FI878_RS07365 PF00149 Calcineurin-like phosphoesterase FI878_RS07370 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FI878_RS07375 PF00749 tRNA synthetases class I (E and Q), catalytic domain FI878_RS07375 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain FI878_RS07380 PF02540 NAD synthase FI878_RS07380 PF00958 GMP synthase C terminal domain FI878_RS07380 PF00117 Glutamine amidotransferase class-I FI878_RS07385 PF05985 Ethanolamine ammonia-lyase light chain (EutC) FI878_RS07390 PF06751 Ethanolamine ammonia lyase large subunit (EutB) FI878_RS07395 PF13520 Amino acid permease FI878_RS07400 PF00171 Aldehyde dehydrogenase family FI878_RS07415 PF00465 Iron-containing alcohol dehydrogenase FI878_RS07420 PF05970 PIF1-like helicase FI878_RS07420 PF14493 Helix-turn-helix domain FI878_RS07430 PF06445 GyrI-like small molecule binding domain FI878_RS07435 PF02110 Hydroxyethylthiazole kinase family FI878_RS07450 PF01433 Peptidase family M1 domain FI878_RS07450 PF17432 Domain of unknown function (DUF3458_C) ARM repeats FI878_RS07450 PF11940 Domain of unknown function (DUF3458) Ig-like fold FI878_RS07460 PF00106 short chain dehydrogenase FI878_RS07470 PF01817 Chorismate mutase type II FI878_RS07475 PF01037 Lrp/AsnC ligand binding domain FI878_RS07485 PF00440 Bacterial regulatory proteins, tetR family FI878_RS07490 PF00593 TonB dependent receptor FI878_RS07490 PF07715 TonB-dependent Receptor Plug Domain FI878_RS07495 PF00924 Mechanosensitive ion channel FI878_RS07525 PF07715 TonB-dependent Receptor Plug Domain FI878_RS07525 PF00593 TonB dependent receptor FI878_RS07545 PF00005 ABC transporter FI878_RS07545 PF12848 ABC transporter FI878_RS07550 PF00582 Universal stress protein family FI878_RS07575 PF00690 Cation transporter/ATPase, N-terminus FI878_RS07575 PF00689 Cation transporting ATPase, C-terminus FI878_RS07580 PF02308 MgtC family FI878_RS07585 PF03594 Benzoate membrane transport protein FI878_RS07590 PF01037 Lrp/AsnC ligand binding domain FI878_RS07595 PF01810 LysE type translocator FI878_RS07600 PF00923 Transaldolase/Fructose-6-phosphate aldolase FI878_RS07605 PF03466 LysR substrate binding domain FI878_RS07605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FI878_RS07615 PF00108 Thiolase, N-terminal domain FI878_RS07615 PF02803 Thiolase, C-terminal domain FI878_RS07625 PF12762 ISXO2-like transposase domain FI878_RS07645 PF07690 Major Facilitator Superfamily FI878_RS07650 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding FI878_RS07650 PF12170 DNA polymerase III tau subunit V interacting with alpha FI878_RS07650 PF12169 DNA polymerase III subunits gamma and tau domain III FI878_RS07655 PF05506 Domain of unknown function (DUF756) FI878_RS07655 PF04185 Phosphoesterase family FI878_RS07660 PF03061 Thioesterase superfamily FI878_RS07665 PF00465 Iron-containing alcohol dehydrogenase FI878_RS07675 PF01451 Low molecular weight phosphotyrosine protein phosphatase FI878_RS07680 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FI878_RS07680 PF01565 FAD binding domain FI878_RS07695 PF01645 Conserved region in glutamate synthase FI878_RS08025 PF12832 MFS_1 like family FI878_RS08035 PF02785 Biotin carboxylase C-terminal domain FI878_RS08035 PF00289 Biotin carboxylase, N-terminal domain FI878_RS08035 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FI878_RS08040 PF00364 Biotin-requiring enzyme FI878_RS08045 PF01220 Dehydroquinase class II FI878_RS08050 PF13438 Domain of unknown function (DUF4113) FI878_RS08050 PF00817 impB/mucB/samB family FI878_RS08050 PF11799 impB/mucB/samB family C-terminal domain FI878_RS08060 PF00005 ABC transporter FI878_RS08065 PF00486 Transcriptional regulatory protein, C terminal FI878_RS08065 PF00072 Response regulator receiver domain FI878_RS08075 PF18267 Rubredoxin NAD+ reductase C-terminal domain FI878_RS08075 PF13806 Rieske-like [2Fe-2S] domain FI878_RS08075 PF07992 Pyridine nucleotide-disulphide oxidoreductase FI878_RS08075 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FI878_RS08075 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FI878_RS08075 PF04324 BFD-like [2Fe-2S] binding domain FI878_RS08080 PF18267 Rubredoxin NAD+ reductase C-terminal domain FI878_RS08080 PF07992 Pyridine nucleotide-disulphide oxidoreductase FI878_RS08080 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FI878_RS08080 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FI878_RS08080 PF04324 BFD-like [2Fe-2S] binding domain FI878_RS08085 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FI878_RS08085 PF04324 BFD-like [2Fe-2S] binding domain FI878_RS08085 PF01568 Molydopterin dinucleotide binding domain FI878_RS08085 PF00384 Molybdopterin oxidoreductase FI878_RS08090 PF12804 MobA-like NTP transferase domain FI878_RS08095 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FI878_RS08095 PF00384 Molybdopterin oxidoreductase FI878_RS08095 PF01568 Molydopterin dinucleotide binding domain FI878_RS08100 PF06463 Molybdenum Cofactor Synthesis C FI878_RS08100 PF04055 Radical SAM superfamily FI878_RS08110 PF02391 MoaE protein FI878_RS08115 PF01967 MoaC family FI878_RS08115 PF00994 Probable molybdopterin binding domain FI878_RS08120 PF00994 Probable molybdopterin binding domain FI878_RS08120 PF03454 MoeA C-terminal region (domain IV) FI878_RS08120 PF03453 MoeA N-terminal region (domain I and II) FI878_RS08125 PF01638 HxlR-like helix-turn-helix FI878_RS08130 PF00155 Aminotransferase class I and II FI878_RS08130 PF00392 Bacterial regulatory proteins, gntR family FI878_RS08135 PF00892 EamA-like transporter family FI878_RS08155 PF02635 DsrE/DsrF-like family FI878_RS08160 PF16363 GDP-mannose 4,6 dehydratase FI878_RS08165 PF10415 Fumarase C C-terminus FI878_RS08165 PF00206 Lyase FI878_RS08185 PF01266 FAD dependent oxidoreductase FI878_RS08195 PF02542 YgbB family FI878_RS08205 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FI878_RS08205 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FI878_RS08215 PF12762 ISXO2-like transposase domain FI878_RS08225 PF02954 Bacterial regulatory protein, Fis family FI878_RS08225 PF00072 Response regulator receiver domain FI878_RS08225 PF00158 Sigma-54 interaction domain FI878_RS08230 PF00989 PAS fold FI878_RS08230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FI878_RS08230 PF00512 His Kinase A (phospho-acceptor) domain FI878_RS08235 PF04055 Radical SAM superfamily FI878_RS08235 PF18693 TRAM domain FI878_RS08235 PF00919 Uncharacterized protein family UPF0004 FI878_RS08240 PF00696 Amino acid kinase family FI878_RS08245 PF01765 Ribosome recycling factor FI878_RS08250 PF01255 Putative undecaprenyl diphosphate synthase FI878_RS08260 PF13288 DXP reductoisomerase C-terminal domain FI878_RS08260 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FI878_RS08260 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FI878_RS08265 PF13180 PDZ domain FI878_RS08265 PF17820 PDZ domain FI878_RS08265 PF02163 Peptidase family M50 FI878_RS08270 PF01103 Surface antigen FI878_RS08270 PF07244 Surface antigen variable number repeat FI878_RS08280 PF00132 Bacterial transferase hexapeptide (six repeats) FI878_RS08280 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FI878_RS08285 PF07977 FabA-like domain FI878_RS08290 PF00132 Bacterial transferase hexapeptide (six repeats) FI878_RS08290 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FI878_RS08305 PF02631 RecX family FI878_RS08310 PF00154 recA bacterial DNA recombination protein FI878_RS08315 PF01479 S4 domain FI878_RS08320 PF13419 Haloacid dehalogenase-like hydrolase FI878_RS08345 PF01037 Lrp/AsnC ligand binding domain FI878_RS08350 PF00266 Aminotransferase class-V FI878_RS08355 PF00324 Amino acid permease FI878_RS08365 PF00082 Subtilase family FI878_RS08365 PF05922 Peptidase inhibitor I9 FI878_RS08370 PF01740 STAS domain FI878_RS08370 PF00916 Sulfate permease family FI878_RS08375 PF02586 SOS response associated peptidase (SRAP) FI878_RS08380 PF07995 Glucose / Sorbosone dehydrogenase FI878_RS08390 PF03707 Bacterial signalling protein N terminal repeat FI878_RS08390 PF00990 Diguanylate cyclase, GGDEF domain FI878_RS08390 PF00563 EAL domain FI878_RS08410 PF02378 Phosphotransferase system, EIIC FI878_RS08410 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FI878_RS08415 PF00294 pfkB family carbohydrate kinase FI878_RS08420 PF05524 PEP-utilising enzyme, N-terminal FI878_RS08420 PF02896 PEP-utilising enzyme, TIM barrel domain FI878_RS08420 PF00391 PEP-utilising enzyme, mobile domain FI878_RS08420 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FI878_RS08420 PF00381 PTS HPr component phosphorylation site FI878_RS08445 PF05525 Branched-chain amino acid transport protein FI878_RS08450 PF00557 Metallopeptidase family M24 FI878_RS08455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FI878_RS08455 PF03466 LysR substrate binding domain FI878_RS08465 PF00462 Glutaredoxin FI878_RS08470 PF00202 Aminotransferase class-III FI878_RS08475 PF00571 CBS domain FI878_RS08475 PF00478 IMP dehydrogenase / GMP reductase domain FI878_RS08500 PF02881 SRP54-type protein, helical bundle domain FI878_RS08500 PF00448 SRP54-type protein, GTPase domain FI878_RS08510 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) FI878_RS08525 PF08173 Membrane bound YbgT-like protein FI878_RS08530 PF02322 Cytochrome bd terminal oxidase subunit II FI878_RS08535 PF01654 Cytochrome bd terminal oxidase subunit I FI878_RS08550 PF07290 Protein of unknown function (DUF1449) FI878_RS08560 PF00294 pfkB family carbohydrate kinase FI878_RS08565 PF00593 TonB dependent receptor FI878_RS08565 PF07715 TonB-dependent Receptor Plug Domain FI878_RS08570 PF12762 ISXO2-like transposase domain FI878_RS08575 PF08367 Peptidase M16C associated FI878_RS08575 PF00675 Insulinase (Peptidase family M16) FI878_RS08575 PF05193 Peptidase M16 inactive domain FI878_RS08580 PF02253 Phospholipase A1 FI878_RS08585 PF02386 Cation transport protein FI878_RS08590 PF02254 TrkA-N domain FI878_RS08590 PF02080 TrkA-C domain FI878_RS08595 PF00291 Pyridoxal-phosphate dependent enzyme FI878_RS08595 PF00585 C-terminal regulatory domain of Threonine dehydratase FI878_RS08600 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FI878_RS08615 PF02774 Semialdehyde dehydrogenase, dimerisation domain FI878_RS08615 PF01118 Semialdehyde dehydrogenase, NAD binding domain FI878_RS08625 PF02617 ATP-dependent Clp protease adaptor protein ClpS FI878_RS08630 PF17871 AAA lid domain FI878_RS08630 PF00004 ATPase family associated with various cellular activities (AAA) FI878_RS08630 PF02861 Clp amino terminal domain, pathogenicity island component FI878_RS08630 PF10431 C-terminal, D2-small domain, of ClpB protein FI878_RS08630 PF07724 AAA domain (Cdc48 subfamily) FI878_RS08635 PF02694 Uncharacterised BCR, YnfA/UPF0060 family FI878_RS08640 PF00793 DAHP synthetase I family FI878_RS08655 PF07992 Pyridine nucleotide-disulphide oxidoreductase FI878_RS08655 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FI878_RS08685 PF06418 CTP synthase N-terminus FI878_RS08685 PF00117 Glutamine amidotransferase class-I FI878_RS08690 PF00793 DAHP synthetase I family FI878_RS08695 PF00113 Enolase, C-terminal TIM barrel domain FI878_RS08695 PF03952 Enolase, N-terminal domain FI878_RS08700 PF04239 Protein of unknown function (DUF421) FI878_RS08705 PF04977 Septum formation initiator FI878_RS08710 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FI878_RS08715 PF01144 Coenzyme A transferase FI878_RS08720 PF01144 Coenzyme A transferase FI878_RS08725 PF00108 Thiolase, N-terminal domain FI878_RS08725 PF02803 Thiolase, C-terminal domain FI878_RS08730 PF10397 Adenylosuccinate lyase C-terminus FI878_RS08730 PF00206 Lyase FI878_RS08735 PF00561 alpha/beta hydrolase fold FI878_RS08740 PF07690 Major Facilitator Superfamily FI878_RS08745 PF02627 Carboxymuconolactone decarboxylase family FI878_RS08750 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal FI878_RS08750 PF00775 Dioxygenase FI878_RS08755 PF00775 Dioxygenase FI878_RS08760 PF01487 Type I 3-dehydroquinase FI878_RS08765 PF05048 Periplasmic copper-binding protein (NosD) FI878_RS08770 PF04966 Carbohydrate-selective porin, OprB family FI878_RS08775 PF01011 PQQ enzyme repeat FI878_RS08775 PF13360 PQQ-like domain FI878_RS08785 PF04143 Sulphur transport FI878_RS08795 PF00753 Metallo-beta-lactamase superfamily FI878_RS08800 PF09339 IclR helix-turn-helix domain FI878_RS08800 PF01614 Bacterial transcriptional regulator FI878_RS08805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FI878_RS08805 PF03466 LysR substrate binding domain FI878_RS08810 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FI878_RS08810 PF02770 Acyl-CoA dehydrogenase, middle domain FI878_RS08810 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FI878_RS08825 PF00106 short chain dehydrogenase FI878_RS08835 PF07690 Major Facilitator Superfamily FI878_RS08845 PF01425 Amidase FI878_RS08850 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FI878_RS08865 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FI878_RS08865 PF00355 Rieske [2Fe-2S] domain FI878_RS08880 PF00175 Oxidoreductase NAD-binding domain FI878_RS08880 PF00111 2Fe-2S iron-sulfur cluster binding domain FI878_RS08885 PF01613 Flavin reductase like domain FI878_RS08890 PF12833 Helix-turn-helix domain FI878_RS08890 PF02311 AraC-like ligand binding domain FI878_RS08895 PF01179 Copper amine oxidase, enzyme domain FI878_RS08895 PF02727 Copper amine oxidase, N2 domain FI878_RS08895 PF07833 Copper amine oxidase N-terminal domain FI878_RS08895 PF02728 Copper amine oxidase, N3 domain FI878_RS08905 PF00171 Aldehyde dehydrogenase family FI878_RS08910 PF01804 Penicillin amidase FI878_RS08915 PF12146 Serine aminopeptidase, S33 FI878_RS08920 PF02803 Thiolase, C-terminal domain FI878_RS08920 PF00108 Thiolase, N-terminal domain FI878_RS08925 PF01144 Coenzyme A transferase FI878_RS08930 PF01144 Coenzyme A transferase FI878_RS08935 PF00775 Dioxygenase FI878_RS08935 PF04444 Catechol dioxygenase N terminus FI878_RS08940 PF02426 Muconolactone delta-isomerase FI878_RS08945 PF13378 Enolase C-terminal domain-like FI878_RS08945 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FI878_RS08950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FI878_RS08950 PF03466 LysR substrate binding domain FI878_RS08960 PF00392 Bacterial regulatory proteins, gntR family FI878_RS08960 PF07729 FCD domain FI878_RS08965 PF00920 Dehydratase family FI878_RS08970 PF07690 Major Facilitator Superfamily FI878_RS08980 PF00171 Aldehyde dehydrogenase family FI878_RS09000 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FI878_RS09000 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FI878_RS09000 PF02770 Acyl-CoA dehydrogenase, middle domain FI878_RS09010 PF06506 Propionate catabolism activator FI878_RS09010 PF02954 Bacterial regulatory protein, Fis family FI878_RS09010 PF00158 Sigma-54 interaction domain FI878_RS09015 PF13193 AMP-binding enzyme C-terminal domain FI878_RS09015 PF00501 AMP-binding enzyme FI878_RS09020 PF04341 Protein of unknown function, DUF485 FI878_RS09025 PF00474 Sodium:solute symporter family FI878_RS09030 PF08240 Alcohol dehydrogenase GroES-like domain FI878_RS09030 PF00107 Zinc-binding dehydrogenase FI878_RS09035 PF00171 Aldehyde dehydrogenase family FI878_RS09045 PF00561 alpha/beta hydrolase fold FI878_RS09050 PF06628 Catalase-related immune-responsive FI878_RS09050 PF00199 Catalase FI878_RS09065 PF07859 alpha/beta hydrolase fold FI878_RS09070 PF01047 MarR family FI878_RS09075 PF07992 Pyridine nucleotide-disulphide oxidoreductase FI878_RS09075 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FI878_RS09080 PF00106 short chain dehydrogenase FI878_RS09085 PF01872 RibD C-terminal domain FI878_RS09090 PF09278 MerR, DNA binding FI878_RS09090 PF00376 MerR family regulatory protein FI878_RS09100 PF07992 Pyridine nucleotide-disulphide oxidoreductase FI878_RS09110 PF12706 Beta-lactamase superfamily domain FI878_RS09115 PF08359 YsiA-like protein, C-terminal region FI878_RS09115 PF00440 Bacterial regulatory proteins, tetR family FI878_RS09125 PF00857 Isochorismatase family FI878_RS09130 PF03466 LysR substrate binding domain FI878_RS09130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FI878_RS09135 PF07995 Glucose / Sorbosone dehydrogenase FI878_RS09140 PF02254 TrkA-N domain FI878_RS09140 PF00999 Sodium/hydrogen exchanger family FI878_RS09150 PF07687 Peptidase dimerisation domain FI878_RS09150 PF01546 Peptidase family M20/M25/M40 FI878_RS09160 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB FI878_RS09160 PF17287 POTRA domain FI878_RS09160 PF08479 POTRA domain, ShlB-type FI878_RS09165 PF13018 Extended Signal Peptide of Type V secretion system FI878_RS09165 PF13332 Hemagglutinin repeat FI878_RS09165 PF04829 Pre-toxin domain with VENN motif FI878_RS09165 PF05860 haemagglutination activity domain FI878_RS09180 PF07690 Major Facilitator Superfamily FI878_RS09185 PF04909 Amidohydrolase FI878_RS09195 PF00392 Bacterial regulatory proteins, gntR family FI878_RS09195 PF07702 UTRA domain FI878_RS09200 PF08450 SMP-30/Gluconolactonase/LRE-like region FI878_RS09210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FI878_RS09210 PF03466 LysR substrate binding domain FI878_RS09230 PF07690 Major Facilitator Superfamily FI878_RS09235 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FI878_RS09235 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FI878_RS09235 PF01842 ACT domain FI878_RS09240 PF03737 Aldolase/RraA FI878_RS09260 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FI878_RS09260 PF00529 HlyD membrane-fusion protein of T1SS FI878_RS09275 PF00171 Aldehyde dehydrogenase family FI878_RS09280 PF00920 Dehydratase family FI878_RS09290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FI878_RS09290 PF03466 LysR substrate binding domain FI878_RS09295 PF01370 NAD dependent epimerase/dehydratase family FI878_RS09300 PF07690 Major Facilitator Superfamily FI878_RS09305 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FI878_RS09305 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FI878_RS09310 PF06719 AraC-type transcriptional regulator N-terminus FI878_RS09310 PF12833 Helix-turn-helix domain FI878_RS09325 PF08240 Alcohol dehydrogenase GroES-like domain FI878_RS09325 PF00107 Zinc-binding dehydrogenase FI878_RS09340 PF00005 ABC transporter FI878_RS09360 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FI878_RS09360 PF14572 Phosphoribosyl synthetase-associated domain FI878_RS09365 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FI878_RS09435 PF00196 Bacterial regulatory proteins, luxR family FI878_RS09465 PF01975 Survival protein SurE FI878_RS09475 PF02824 TGS domain FI878_RS09475 PF04607 Region found in RelA / SpoT proteins FI878_RS09475 PF13291 ACT domain FI878_RS09525 PF12146 Serine aminopeptidase, S33 FI878_RS09530 PF12833 Helix-turn-helix domain FI878_RS09530 PF02311 AraC-like ligand binding domain FI878_RS09540 PF00512 His Kinase A (phospho-acceptor) domain FI878_RS09540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FI878_RS09540 PF00672 HAMP domain FI878_RS09540 PF16527 Two-component sensor protein CpxA, periplasmic domain FI878_RS09545 PF00486 Transcriptional regulatory protein, C terminal FI878_RS09545 PF00072 Response regulator receiver domain FI878_RS09550 PF00529 HlyD membrane-fusion protein of T1SS FI878_RS09550 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FI878_RS09555 PF00873 AcrB/AcrD/AcrF family FI878_RS09560 PF02321 Outer membrane efflux protein FI878_RS09565 PF12146 Serine aminopeptidase, S33 FI878_RS09570 PF00743 Flavin-binding monooxygenase-like FI878_RS09575 PF01593 Flavin containing amine oxidoreductase FI878_RS09590 PF01266 FAD dependent oxidoreductase FI878_RS09610 PF16970 Type-1 fimbrial protein, A FI878_RS09620 PF02753 Pili assembly chaperone PapD, C-terminal domain FI878_RS09620 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FI878_RS09625 PF00577 Outer membrane usher protein FI878_RS09625 PF13953 PapC C-terminal domain FI878_RS09625 PF13954 PapC N-terminal domain FI878_RS09630 PF00419 Fimbrial protein FI878_RS09650 PF08240 Alcohol dehydrogenase GroES-like domain FI878_RS09650 PF00107 Zinc-binding dehydrogenase FI878_RS09660 PF00199 Catalase FI878_RS09680 PF13091 PLD-like domain FI878_RS09700 PF01244 Membrane dipeptidase (Peptidase family M19) FI878_RS09705 PF13186 Iron-sulfur cluster-binding domain FI878_RS09705 PF04055 Radical SAM superfamily FI878_RS09710 PF05402 Coenzyme PQQ synthesis protein D (PqqD) FI878_RS09715 PF03070 TENA/THI-4/PQQC family FI878_RS09720 PF12706 Beta-lactamase superfamily domain FI878_RS09725 PF08042 PqqA family FI878_RS09730 PF17941 Polyphosphate kinase C-terminal domain 1 FI878_RS09730 PF13090 Polyphosphate kinase C-terminal domain 2 FI878_RS09730 PF13089 Polyphosphate kinase N-terminal domain FI878_RS09730 PF02503 Polyphosphate kinase middle domain FI878_RS09735 PF00149 Calcineurin-like phosphoesterase FI878_RS09745 PF00550 Phosphopantetheine attachment site FI878_RS09745 PF00857 Isochorismatase family FI878_RS09750 PF00106 short chain dehydrogenase FI878_RS09755 PF00005 ABC transporter FI878_RS09755 PF03459 TOBE domain FI878_RS09760 PF00528 Binding-protein-dependent transport system inner membrane component FI878_RS09770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FI878_RS09770 PF03459 TOBE domain FI878_RS09775 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FI878_RS09775 PF00355 Rieske [2Fe-2S] domain FI878_RS09780 PF00866 Ring hydroxylating beta subunit FI878_RS09785 PF00175 Oxidoreductase NAD-binding domain FI878_RS09785 PF00970 Oxidoreductase FAD-binding domain FI878_RS09785 PF00111 2Fe-2S iron-sulfur cluster binding domain FI878_RS09790 PF12833 Helix-turn-helix domain FI878_RS09790 PF14525 AraC-binding-like domain FI878_RS09800 PF01613 Flavin reductase like domain FI878_RS09815 PF01738 Dienelactone hydrolase family FI878_RS09820 PF07690 Major Facilitator Superfamily FI878_RS09825 PF06719 AraC-type transcriptional regulator N-terminus FI878_RS09825 PF12833 Helix-turn-helix domain FI878_RS09850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FI878_RS09850 PF03466 LysR substrate binding domain FI878_RS09855 PF01144 Coenzyme A transferase FI878_RS09860 PF01144 Coenzyme A transferase FI878_RS09865 PF02667 Short chain fatty acid transporter FI878_RS09870 PF02803 Thiolase, C-terminal domain FI878_RS09870 PF00108 Thiolase, N-terminal domain FI878_RS09875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FI878_RS09875 PF03466 LysR substrate binding domain FI878_RS09880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FI878_RS09880 PF03466 LysR substrate binding domain FI878_RS09895 PF00206 Lyase FI878_RS09895 PF10415 Fumarase C C-terminus FI878_RS10010 PF04233 Phage Mu protein F like protein FI878_RS10015 PF06074 Protein of unknown function (DUF935) FI878_RS10030 PF03237 Terminase-like family FI878_RS10035 PF11985 Protein of unknown function (DUF3486) FI878_RS10065 PF00717 Peptidase S24-like FI878_RS10065 PF01381 Helix-turn-helix FI878_RS10125 PF00216 Bacterial DNA-binding protein FI878_RS10170 PF12762 ISXO2-like transposase domain FI878_RS10180 PF00083 Sugar (and other) transporter FI878_RS10195 PF00005 ABC transporter FI878_RS10200 PF00528 Binding-protein-dependent transport system inner membrane component FI878_RS10205 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FI878_RS10220 PF07702 UTRA domain FI878_RS10220 PF00392 Bacterial regulatory proteins, gntR family FI878_RS10230 PF02525 Flavodoxin-like fold FI878_RS10235 PF01638 HxlR-like helix-turn-helix FI878_RS10240 PF06445 GyrI-like small molecule binding domain FI878_RS10240 PF12833 Helix-turn-helix domain FI878_RS10255 PF01925 Sulfite exporter TauE/SafE FI878_RS10260 PF00753 Metallo-beta-lactamase superfamily FI878_RS10260 PF04273 Putative phosphatase (DUF442) FI878_RS10265 PF00753 Metallo-beta-lactamase superfamily FI878_RS10265 PF04273 Putative phosphatase (DUF442) FI878_RS10270 PF00158 Sigma-54 interaction domain FI878_RS10270 PF00072 Response regulator receiver domain FI878_RS10270 PF02954 Bacterial regulatory protein, Fis family FI878_RS10275 PF01062 Bestrophin, RFP-TM, chloride channel FI878_RS10280 PF08240 Alcohol dehydrogenase GroES-like domain FI878_RS10280 PF00107 Zinc-binding dehydrogenase FI878_RS10285 PF00106 short chain dehydrogenase FI878_RS10290 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FI878_RS10290 PF07992 Pyridine nucleotide-disulphide oxidoreductase FI878_RS10295 PF02817 e3 binding domain FI878_RS10295 PF00364 Biotin-requiring enzyme FI878_RS10295 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FI878_RS10300 PF02779 Transketolase, pyrimidine binding domain FI878_RS10300 PF02780 Transketolase, C-terminal domain FI878_RS10305 PF00676 Dehydrogenase E1 component FI878_RS10310 PF04055 Radical SAM superfamily FI878_RS10325 PF08448 PAS fold FI878_RS10325 PF00990 Diguanylate cyclase, GGDEF domain FI878_RS10330 PF01264 Chorismate synthase FI878_RS10335 PF05175 Methyltransferase small domain FI878_RS10340 PF00291 Pyridoxal-phosphate dependent enzyme FI878_RS10350 PF00004 ATPase family associated with various cellular activities (AAA) FI878_RS10350 PF17862 AAA+ lid domain FI878_RS10350 PF01434 Peptidase family M41 FI878_RS10360 PF05166 YcgL domain FI878_RS10380 PF01612 3'-5' exonuclease FI878_RS10380 PF00570 HRDC domain FI878_RS10385 PF13662 Toprim domain FI878_RS10385 PF02132 RecR protein FI878_RS10390 PF02575 YbaB/EbfC DNA-binding family FI878_RS10400 PF01053 Cys/Met metabolism PLP-dependent enzyme FI878_RS10405 PF00561 alpha/beta hydrolase fold FI878_RS10410 PF08241 Methyltransferase domain FI878_RS10440 PF01230 HIT domain FI878_RS10475 PF00005 ABC transporter FI878_RS10480 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FI878_RS10490 PF02684 Lipid-A-disaccharide synthetase FI878_RS10495 PF00593 TonB dependent receptor FI878_RS10495 PF07715 TonB-dependent Receptor Plug Domain FI878_RS10515 PF01925 Sulfite exporter TauE/SafE FI878_RS10520 PF00793 DAHP synthetase I family FI878_RS10525 PF02654 Cobalamin-5-phosphate synthase FI878_RS10540 PF02277 Phosphoribosyltransferase FI878_RS10545 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase FI878_RS10580 PF07715 TonB-dependent Receptor Plug Domain FI878_RS10580 PF00593 TonB dependent receptor FI878_RS10595 PF06276 Ferric iron reductase FhuF-like transporter FI878_RS10595 PF04183 IucA / IucC family FI878_RS10600 PF04183 IucA / IucC family FI878_RS10600 PF06276 Ferric iron reductase FhuF-like transporter FI878_RS10605 PF07690 Major Facilitator Superfamily FI878_RS10610 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) FI878_RS10615 PF04183 IucA / IucC family FI878_RS10615 PF06276 Ferric iron reductase FhuF-like transporter FI878_RS10620 PF04073 Aminoacyl-tRNA editing domain FI878_RS10630 PF03109 ABC1 family FI878_RS10635 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FI878_RS10635 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FI878_RS10635 PF02770 Acyl-CoA dehydrogenase, middle domain FI878_RS10640 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FI878_RS10640 PF02770 Acyl-CoA dehydrogenase, middle domain FI878_RS10640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FI878_RS10645 PF00487 Fatty acid desaturase FI878_RS10650 PF12852 Cupin FI878_RS10650 PF12833 Helix-turn-helix domain FI878_RS10655 PF00639 PPIC-type PPIASE domain FI878_RS10655 PF09312 SurA N-terminal domain FI878_RS10660 PF00216 Bacterial DNA-binding protein FI878_RS10675 PF02082 Transcriptional regulator FI878_RS10680 PF00266 Aminotransferase class-V FI878_RS10685 PF01592 NifU-like N terminal domain FI878_RS10690 PF01521 Iron-sulphur cluster biosynthesis FI878_RS10695 PF07743 HSCB C-terminal oligomerisation domain FI878_RS10695 PF00226 DnaJ domain FI878_RS10700 PF00012 Hsp70 protein FI878_RS10705 PF00111 2Fe-2S iron-sulfur cluster binding domain FI878_RS10710 PF00211 Adenylate and Guanylate cyclase catalytic domain FI878_RS10720 PF03461 TRCF domain FI878_RS10720 PF00271 Helicase conserved C-terminal domain FI878_RS10720 PF17757 UvrB interaction domain FI878_RS10720 PF00270 DEAD/DEAH box helicase FI878_RS10720 PF02559 CarD-like/TRCF domain FI878_RS10740 PF03737 Aldolase/RraA FI878_RS10745 PF13460 NAD(P)H-binding FI878_RS10750 PF01649 Ribosomal protein S20 FI878_RS10760 PF00459 Inositol monophosphatase family FI878_RS10775 PF00005 ABC transporter FI878_RS10775 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FI878_RS10780 PF00528 Binding-protein-dependent transport system inner membrane component FI878_RS10785 PF00528 Binding-protein-dependent transport system inner membrane component FI878_RS10790 PF01432 Peptidase family M3 FI878_RS10810 PF00593 TonB dependent receptor FI878_RS10810 PF07715 TonB-dependent Receptor Plug Domain FI878_RS10820 PF01618 MotA/TolQ/ExbB proton channel family FI878_RS10825 PF02472 Biopolymer transport protein ExbD/TolR FI878_RS10830 PF02472 Biopolymer transport protein ExbD/TolR FI878_RS10840 PF01274 Malate synthase FI878_RS10910 PF10145 Phage-related minor tail protein FI878_RS10910 PF01551 Peptidase family M23 FI878_RS10910 PF01464 Transglycosylase SLT domain FI878_RS10970 PF04860 Phage portal protein FI878_RS11065 PF00772 DnaB-like helicase N terminal domain FI878_RS11065 PF03796 DnaB-like helicase C terminal domain FI878_RS11130 PF02899 Phage integrase, N-terminal SAM-like domain FI878_RS11130 PF00589 Phage integrase family FI878_RS11135 PF03969 AFG1-like ATPase FI878_RS11145 PF00743 Flavin-binding monooxygenase-like FI878_RS11155 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FI878_RS11165 PF00216 Bacterial DNA-binding protein FI878_RS11170 PF00575 S1 RNA binding domain FI878_RS11175 PF02224 Cytidylate kinase FI878_RS11185 PF14437 MafB19-like deaminase FI878_RS11195 PF03167 Uracil DNA glycosylase superfamily FI878_RS11205 PF03934 Type II secretion system (T2SS), protein K FI878_RS11210 PF11612 Type II secretion system (T2SS), protein J FI878_RS11210 PF07963 Prokaryotic N-terminal methylation motif FI878_RS11215 PF07963 Prokaryotic N-terminal methylation motif FI878_RS11215 PF02501 Type II secretion system (T2SS), protein I FI878_RS11230 PF01026 TatD related DNase FI878_RS11240 PF09115 DNA polymerase III, delta subunit, C terminal FI878_RS11245 PF02348 Cytidylyltransferase FI878_RS11250 PF02606 Tetraacyldisaccharide-1-P 4'-kinase FI878_RS11255 PF00664 ABC transporter transmembrane region FI878_RS11255 PF00005 ABC transporter FI878_RS11265 PF01618 MotA/TolQ/ExbB proton channel family FI878_RS11270 PF17762 HTH domain found in ParB protein FI878_RS11270 PF02195 ParB-like nuclease domain FI878_RS11275 PF13614 AAA domain FI878_RS11280 PF02527 rRNA small subunit methyltransferase G FI878_RS11285 PF00483 Nucleotidyl transferase FI878_RS11290 PF01636 Phosphotransferase enzyme family FI878_RS11295 PF03968 OstA-like protein FI878_RS11295 PF04453 LPS transport system D FI878_RS11300 PF00639 PPIC-type PPIASE domain FI878_RS11300 PF09312 SurA N-terminal domain FI878_RS11305 PF01116 Fructose-bisphosphate aldolase class-II FI878_RS11315 PF00162 Phosphoglycerate kinase FI878_RS11325 PF02545 Maf-like protein FI878_RS11330 PF08007 Cupin superfamily protein FI878_RS11345 PF00375 Sodium:dicarboxylate symporter family FI878_RS11350 PF06912 Protein of unknown function (DUF1275) FI878_RS11355 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) FI878_RS11360 PF12762 ISXO2-like transposase domain FI878_RS11365 PF00664 ABC transporter transmembrane region FI878_RS11365 PF00005 ABC transporter FI878_RS11375 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term FI878_RS11375 PF12833 Helix-turn-helix domain FI878_RS11380 PF01597 Glycine cleavage H-protein FI878_RS11385 PF02146 Sir2 family FI878_RS11390 PF00474 Sodium:solute symporter family FI878_RS11395 PF01037 Lrp/AsnC ligand binding domain FI878_RS11400 PF01619 Proline dehydrogenase FI878_RS11400 PF00171 Aldehyde dehydrogenase family FI878_RS11400 PF18327 Proline utilization A proline dehydrogenase N-terminal domain FI878_RS11400 PF14850 DNA-binding domain of Proline dehydrogenase FI878_RS11405 PF04229 GrpB protein FI878_RS11410 PF05958 tRNA (Uracil-5-)-methyltransferase FI878_RS11420 PF09992 Phosphodiester glycosidase FI878_RS11430 PF04264 YceI-like domain FI878_RS11440 PF02779 Transketolase, pyrimidine binding domain FI878_RS11440 PF00456 Transketolase, thiamine diphosphate binding domain FI878_RS11440 PF02780 Transketolase, C-terminal domain FI878_RS11445 PF02772 S-adenosylmethionine synthetase, central domain FI878_RS11445 PF02773 S-adenosylmethionine synthetase, C-terminal domain FI878_RS11445 PF00438 S-adenosylmethionine synthetase, N-terminal domain FI878_RS11465 PF00905 Penicillin binding protein transpeptidase domain FI878_RS11480 PF02075 Crossover junction endodeoxyribonuclease RuvC FI878_RS11485 PF03853 YjeF-related protein N-terminus FI878_RS11485 PF01256 Carbohydrate kinase FI878_RS11490 PF08331 Domain of unknown function (DUF1730) FI878_RS11495 PF04055 Radical SAM superfamily FI878_RS11495 PF06968 Biotin and Thiamin Synthesis associated domain FI878_RS11510 PF16970 Type-1 fimbrial protein, A FI878_RS11515 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FI878_RS11515 PF02753 Pili assembly chaperone PapD, C-terminal domain FI878_RS11520 PF13953 PapC C-terminal domain FI878_RS11520 PF13954 PapC N-terminal domain FI878_RS11520 PF00577 Outer membrane usher protein FI878_RS11540 PF00892 EamA-like transporter family FI878_RS11550 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin FI878_RS11560 PF03466 LysR substrate binding domain FI878_RS11560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FI878_RS11580 PF00440 Bacterial regulatory proteins, tetR family FI878_RS11590 PF01709 Transcriptional regulator FI878_RS11595 PF01037 Lrp/AsnC ligand binding domain FI878_RS11605 PF00005 ABC transporter FI878_RS11610 PF00528 Binding-protein-dependent transport system inner membrane component FI878_RS11615 PF00528 Binding-protein-dependent transport system inner membrane component FI878_RS11630 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FI878_RS11630 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FI878_RS11640 PF00296 Luciferase-like monooxygenase FI878_RS11645 PF03180 NLPA lipoprotein FI878_RS11650 PF03180 NLPA lipoprotein FI878_RS11655 PF09383 NIL domain FI878_RS11655 PF00005 ABC transporter FI878_RS11660 PF00528 Binding-protein-dependent transport system inner membrane component FI878_RS11665 PF06071 Protein of unknown function (DUF933) FI878_RS11665 PF01926 50S ribosome-binding GTPase FI878_RS11690 PF03591 AzlC protein FI878_RS11695 PF05437 Branched-chain amino acid transport protein (AzlD) FI878_RS11705 PF02222 ATP-grasp domain FI878_RS11710 PF01909 Nucleotidyltransferase domain FI878_RS11710 PF01966 HD domain FI878_RS11710 PF08335 GlnD PII-uridylyltransferase FI878_RS11715 PF00155 Aminotransferase class I and II FI878_RS11725 PF12852 Cupin FI878_RS11725 PF12833 Helix-turn-helix domain FI878_RS11730 PF00255 Glutathione peroxidase FI878_RS11735 PF01641 SelR domain FI878_RS11740 PF00155 Aminotransferase class I and II FI878_RS11745 PF00375 Sodium:dicarboxylate symporter family FI878_RS11750 PF17763 Glutaminase/Asparaginase C-terminal domain FI878_RS11750 PF00710 Asparaginase, N-terminal FI878_RS11755 PF14579 Helix-hairpin-helix motif FI878_RS11755 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FI878_RS11755 PF07733 Bacterial DNA polymerase III alpha NTPase domain FI878_RS11755 PF02811 PHP domain FI878_RS11755 PF01336 OB-fold nucleic acid binding domain FI878_RS11760 PF00588 SpoU rRNA Methylase family FI878_RS11765 PF00132 Bacterial transferase hexapeptide (six repeats) FI878_RS11780 PF13192 Thioredoxin domain FI878_RS11780 PF07992 Pyridine nucleotide-disulphide oxidoreductase FI878_RS11795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FI878_RS11795 PF03466 LysR substrate binding domain FI878_RS11800 PF01758 Sodium Bile acid symporter family FI878_RS11805 PF01022 Bacterial regulatory protein, arsR family FI878_RS11810 PF03960 ArsC family FI878_RS11820 PF01979 Amidohydrolase family FI878_RS11820 PF13382 Adenine deaminase C-terminal domain FI878_RS11830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FI878_RS11830 PF03466 LysR substrate binding domain FI878_RS11840 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin FI878_RS11845 PF01177 Asp/Glu/Hydantoin racemase FI878_RS11850 PF02668 Taurine catabolism dioxygenase TauD, TfdA family FI878_RS11855 PF00528 Binding-protein-dependent transport system inner membrane component FI878_RS11860 PF00005 ABC transporter FI878_RS11865 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FI878_RS11875 PF00083 Sugar (and other) transporter FI878_RS11880 PF00296 Luciferase-like monooxygenase FI878_RS11885 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FI878_RS11885 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FI878_RS11885 PF02770 Acyl-CoA dehydrogenase, middle domain FI878_RS11895 PF01654 Cytochrome bd terminal oxidase subunit I FI878_RS11900 PF02322 Cytochrome bd terminal oxidase subunit II FI878_RS11910 PF00155 Aminotransferase class I and II FI878_RS11910 PF00392 Bacterial regulatory proteins, gntR family FI878_RS11915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FI878_RS11915 PF03466 LysR substrate binding domain FI878_RS11935 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG FI878_RS11945 PF01039 Carboxyl transferase domain FI878_RS11950 PF06857 Malonate decarboxylase delta subunit (MdcD) FI878_RS11955 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase FI878_RS11960 PF16957 Malonate decarboxylase, alpha subunit, transporter FI878_RS11965 PF07690 Major Facilitator Superfamily FI878_RS11980 PF00392 Bacterial regulatory proteins, gntR family FI878_RS11980 PF00155 Aminotransferase class I and II FI878_RS11985 PF04172 LrgB-like family FI878_RS11990 PF03788 LrgA family FI878_RS11995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FI878_RS11995 PF03466 LysR substrate binding domain FI878_RS12000 PF02798 Glutathione S-transferase, N-terminal domain FI878_RS12000 PF14834 Glutathione S-transferase, C-terminal domain FI878_RS12005 PF02798 Glutathione S-transferase, N-terminal domain FI878_RS12010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FI878_RS12010 PF03466 LysR substrate binding domain FI878_RS12020 PF00581 Rhodanese-like domain FI878_RS12025 PF00132 Bacterial transferase hexapeptide (six repeats) FI878_RS12035 PF00266 Aminotransferase class-V FI878_RS12045 PF01810 LysE type translocator FI878_RS12050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FI878_RS12050 PF03466 LysR substrate binding domain FI878_RS12060 PF00497 Bacterial extracellular solute-binding proteins, family 3 FI878_RS12065 PF00497 Bacterial extracellular solute-binding proteins, family 3 FI878_RS12070 PF00005 ABC transporter FI878_RS12075 PF00528 Binding-protein-dependent transport system inner membrane component FI878_RS12080 PF00528 Binding-protein-dependent transport system inner membrane component FI878_RS12095 PF00072 Response regulator receiver domain FI878_RS12100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FI878_RS12100 PF09308 LuxQ, periplasmic FI878_RS12100 PF00072 Response regulator receiver domain FI878_RS12100 PF00512 His Kinase A (phospho-acceptor) domain FI878_RS12110 PF13404 AsnC-type helix-turn-helix domain FI878_RS12110 PF01037 Lrp/AsnC ligand binding domain FI878_RS12120 PF00717 Peptidase S24-like FI878_RS12145 PF00199 Catalase FI878_RS12145 PF18011 C-terminal domain found in long catalases FI878_RS12145 PF06628 Catalase-related immune-responsive FI878_RS12155 PF02464 Competence-damaged protein FI878_RS12155 PF18146 Damage-inducible protein CinA KH domain FI878_RS12155 PF00994 Probable molybdopterin binding domain FI878_RS12190 PF03466 LysR substrate binding domain FI878_RS12190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FI878_RS12210 PF13193 AMP-binding enzyme C-terminal domain FI878_RS12210 PF00501 AMP-binding enzyme FI878_RS12215 PF00440 Bacterial regulatory proteins, tetR family FI878_RS12220 PF02770 Acyl-CoA dehydrogenase, middle domain FI878_RS12220 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FI878_RS12220 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FI878_RS12225 PF01039 Carboxyl transferase domain FI878_RS12230 PF00378 Enoyl-CoA hydratase/isomerase FI878_RS12235 PF02785 Biotin carboxylase C-terminal domain FI878_RS12235 PF00364 Biotin-requiring enzyme FI878_RS12235 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FI878_RS12235 PF18140 Propionyl-coenzyme A carboxylase BT domain FI878_RS12235 PF00289 Biotin carboxylase, N-terminal domain FI878_RS12240 PF00682 HMGL-like FI878_RS12245 PF03466 LysR substrate binding domain FI878_RS12245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FI878_RS12260 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FI878_RS12260 PF02770 Acyl-CoA dehydrogenase, middle domain FI878_RS12260 PF12806 Acetyl-CoA dehydrogenase C-terminal like FI878_RS12260 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FI878_RS12270 PF07690 Major Facilitator Superfamily FI878_RS12280 PF01144 Coenzyme A transferase FI878_RS12285 PF01144 Coenzyme A transferase FI878_RS12290 PF07690 Major Facilitator Superfamily FI878_RS12295 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FI878_RS12295 PF02770 Acyl-CoA dehydrogenase, middle domain FI878_RS12295 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FI878_RS12300 PF00378 Enoyl-CoA hydratase/isomerase FI878_RS12310 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain FI878_RS12310 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FI878_RS12310 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FI878_RS12315 PF00108 Thiolase, N-terminal domain FI878_RS12315 PF02803 Thiolase, C-terminal domain FI878_RS12320 PF09339 IclR helix-turn-helix domain FI878_RS12325 PF07690 Major Facilitator Superfamily FI878_RS12330 PF03060 Nitronate monooxygenase FI878_RS12335 PF00378 Enoyl-CoA hydratase/isomerase FI878_RS12340 PF09339 IclR helix-turn-helix domain FI878_RS12345 PF02515 CoA-transferase family III FI878_RS12350 PF02770 Acyl-CoA dehydrogenase, middle domain FI878_RS12350 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FI878_RS12350 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FI878_RS12355 PF07690 Major Facilitator Superfamily FI878_RS12360 PF13419 Haloacid dehalogenase-like hydrolase FI878_RS12365 PF00266 Aminotransferase class-V FI878_RS12370 PF01266 FAD dependent oxidoreductase FI878_RS12375 PF00528 Binding-protein-dependent transport system inner membrane component FI878_RS12380 PF08402 TOBE domain FI878_RS12380 PF00005 ABC transporter FI878_RS12390 PF07702 UTRA domain FI878_RS12390 PF00392 Bacterial regulatory proteins, gntR family FI878_RS12395 PF01494 FAD binding domain FI878_RS12400 PF09339 IclR helix-turn-helix domain FI878_RS12400 PF01614 Bacterial transcriptional regulator FI878_RS12405 PF02525 Flavodoxin-like fold FI878_RS12410 PF03466 LysR substrate binding domain FI878_RS12410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FI878_RS12415 PF02627 Carboxymuconolactone decarboxylase family FI878_RS12420 PF00171 Aldehyde dehydrogenase family FI878_RS12430 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin FI878_RS12440 PF00171 Aldehyde dehydrogenase family FI878_RS12445 PF00296 Luciferase-like monooxygenase FI878_RS12450 PF01613 Flavin reductase like domain FI878_RS12455 PF12697 Alpha/beta hydrolase family FI878_RS12475 PF01292 Prokaryotic cytochrome b561 FI878_RS12480 PF00199 Catalase FI878_RS12515 PF03061 Thioesterase superfamily FI878_RS12520 PF00132 Bacterial transferase hexapeptide (six repeats) FI878_RS12525 PF08223 PaaX-like protein C-terminal domain FI878_RS12525 PF07848 PaaX-like protein FI878_RS12530 PF00501 AMP-binding enzyme FI878_RS12530 PF14535 AMP-binding enzyme C-terminal domain FI878_RS12535 PF02803 Thiolase, C-terminal domain FI878_RS12535 PF00108 Thiolase, N-terminal domain FI878_RS12540 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain FI878_RS12540 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FI878_RS12540 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FI878_RS12545 PF00378 Enoyl-CoA hydratase/isomerase FI878_RS12550 PF00378 Enoyl-CoA hydratase/isomerase FI878_RS12555 PF00970 Oxidoreductase FAD-binding domain FI878_RS12555 PF00111 2Fe-2S iron-sulfur cluster binding domain FI878_RS12555 PF00175 Oxidoreductase NAD-binding domain FI878_RS12560 PF01883 Iron-sulfur cluster assembly protein FI878_RS12565 PF05138 Phenylacetic acid catabolic protein FI878_RS12570 PF06243 Phenylacetic acid degradation B FI878_RS12575 PF05138 Phenylacetic acid catabolic protein FI878_RS12580 PF00171 Aldehyde dehydrogenase family FI878_RS12580 PF01575 MaoC like domain FI878_RS12585 PF03315 Serine dehydratase beta chain FI878_RS12585 PF03313 Serine dehydratase alpha chain FI878_RS12590 PF13520 Amino acid permease FI878_RS12595 PF00171 Aldehyde dehydrogenase family FI878_RS12600 PF00083 Sugar (and other) transporter FI878_RS12610 PF07992 Pyridine nucleotide-disulphide oxidoreductase FI878_RS12610 PF04324 BFD-like [2Fe-2S] binding domain FI878_RS12620 PF01266 FAD dependent oxidoreductase FI878_RS12625 PF05544 Proline racemase FI878_RS12630 PF00392 Bacterial regulatory proteins, gntR family FI878_RS12640 PF00701 Dihydrodipicolinate synthetase family FI878_RS12650 PF00376 MerR family regulatory protein FI878_RS12650 PF09278 MerR, DNA binding FI878_RS12675 PF00654 Voltage gated chloride channel FI878_RS12680 PF02785 Biotin carboxylase C-terminal domain FI878_RS12680 PF00289 Biotin carboxylase, N-terminal domain FI878_RS12680 PF00364 Biotin-requiring enzyme FI878_RS12680 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FI878_RS12690 PF07286 Protein of unknown function (DUF1445) FI878_RS12695 PF03746 LamB/YcsF family FI878_RS12700 PF01566 Natural resistance-associated macrophage protein FI878_RS12705 PF03466 LysR substrate binding domain FI878_RS12705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FI878_RS12720 PF14220 Domain of unknown function (DUF4329) FI878_RS12720 PF03527 RHS protein FI878_RS12720 PF05593 RHS Repeat FI878_RS12725 PF16671 Actin cross-linking domain FI878_RS12725 PF04717 Type VI secretion system, phage-baseplate injector FI878_RS12735 PF13419 Haloacid dehalogenase-like hydrolase FI878_RS12755 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FI878_RS12755 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FI878_RS12775 PF07690 Major Facilitator Superfamily FI878_RS12785 PF03279 Bacterial lipid A biosynthesis acyltransferase FI878_RS12790 PF03707 Bacterial signalling protein N terminal repeat FI878_RS12790 PF00563 EAL domain FI878_RS12790 PF00990 Diguanylate cyclase, GGDEF domain FI878_RS12795 PF00892 EamA-like transporter family FI878_RS12800 PF01037 Lrp/AsnC ligand binding domain FI878_RS12805 PF00488 MutS domain V FI878_RS12805 PF05192 MutS domain III FI878_RS12805 PF05188 MutS domain II FI878_RS12805 PF05190 MutS family domain IV FI878_RS12805 PF01624 MutS domain I FI878_RS12815 PF00037 4Fe-4S binding domain FI878_RS12815 PF11953 Domain of unknown function (DUF3470) FI878_RS12825 PF01596 O-methyltransferase FI878_RS12835 PF00132 Bacterial transferase hexapeptide (six repeats) FI878_RS12840 PF01205 Uncharacterized protein family UPF0029 FI878_RS12850 PF00664 ABC transporter transmembrane region FI878_RS12850 PF00005 ABC transporter FI878_RS12850 PF03412 Peptidase C39 family FI878_RS12855 PF02321 Outer membrane efflux protein FI878_RS12865 PF12399 Branched-chain amino acid ATP-binding cassette transporter FI878_RS12865 PF00005 ABC transporter FI878_RS12870 PF03968 OstA-like protein FI878_RS12885 PF00571 CBS domain FI878_RS12885 PF01380 SIS domain FI878_RS12890 PF01406 tRNA synthetases class I (C) catalytic domain FI878_RS12890 PF09190 DALR domain FI878_RS12920 PF01638 HxlR-like helix-turn-helix FI878_RS12925 PF07690 Major Facilitator Superfamily FI878_RS12950 PF03807 NADP oxidoreductase coenzyme F420-dependent FI878_RS12950 PF14748 Pyrroline-5-carboxylate reductase dimerisation FI878_RS12955 PF12762 ISXO2-like transposase domain FI878_RS12970 PF00313 'Cold-shock' DNA-binding domain FI878_RS12975 PF01810 LysE type translocator FI878_RS13010 PF13742 OB-fold nucleic acid binding domain FI878_RS13010 PF02601 Exonuclease VII, large subunit FI878_RS13045 PF09278 MerR, DNA binding FI878_RS13045 PF00376 MerR family regulatory protein FI878_RS13050 PF00403 Heavy-metal-associated domain FI878_RS13060 PF03466 LysR substrate binding domain FI878_RS13060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FI878_RS13065 PF00355 Rieske [2Fe-2S] domain FI878_RS13065 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FI878_RS13070 PF00866 Ring hydroxylating beta subunit FI878_RS13075 PF00175 Oxidoreductase NAD-binding domain FI878_RS13075 PF00970 Oxidoreductase FAD-binding domain FI878_RS13075 PF00111 2Fe-2S iron-sulfur cluster binding domain FI878_RS13080 PF00106 short chain dehydrogenase FI878_RS13085 PF03594 Benzoate membrane transport protein FI878_RS13090 PF07690 Major Facilitator Superfamily FI878_RS13100 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FI878_RS13100 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FI878_RS13105 PF00270 DEAD/DEAH box helicase FI878_RS13105 PF11898 Domain of unknown function (DUF3418) FI878_RS13105 PF04408 Helicase associated domain (HA2) FI878_RS13105 PF00271 Helicase conserved C-terminal domain FI878_RS13105 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold FI878_RS13110 PF00578 AhpC/TSA family FI878_RS13110 PF10417 C-terminal domain of 1-Cys peroxiredoxin FI878_RS13130 PF13192 Thioredoxin domain FI878_RS13130 PF07992 Pyridine nucleotide-disulphide oxidoreductase FI878_RS13140 PF00043 Glutathione S-transferase, C-terminal domain FI878_RS13140 PF02798 Glutathione S-transferase, N-terminal domain FI878_RS13150 PF02390 Putative methyltransferase FI878_RS13155 PF00043 Glutathione S-transferase, C-terminal domain FI878_RS13155 PF13417 Glutathione S-transferase, N-terminal domain FI878_RS13165 PF00691 OmpA family FI878_RS13165 PF13488 Glycine zipper FI878_RS13170 PF01979 Amidohydrolase family FI878_RS13175 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FI878_RS13175 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FI878_RS13185 PF01170 Putative RNA methylase family UPF0020 FI878_RS13185 PF02926 THUMP domain FI878_RS13185 PF10672 S-adenosylmethionine-dependent methyltransferase FI878_RS13200 PF07724 AAA domain (Cdc48 subfamily) FI878_RS13200 PF17871 AAA lid domain FI878_RS13200 PF02861 Clp amino terminal domain, pathogenicity island component FI878_RS13200 PF10431 C-terminal, D2-small domain, of ClpB protein FI878_RS13200 PF00004 ATPase family associated with various cellular activities (AAA) FI878_RS13215 PF02566 OsmC-like protein FI878_RS13220 PF00027 Cyclic nucleotide-binding domain FI878_RS13220 PF13545 Crp-like helix-turn-helix domain FI878_RS13230 PF00248 Aldo/keto reductase family FI878_RS13245 PF00709 Adenylosuccinate synthetase FI878_RS13250 PF13393 Histidyl-tRNA synthetase FI878_RS13255 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FI878_RS13255 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FI878_RS13260 PF02272 DHHA1 domain FI878_RS13260 PF01411 tRNA synthetases class II (A) FI878_RS13260 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FI878_RS13265 PF13840 ACT domain FI878_RS13265 PF01842 ACT domain FI878_RS13265 PF00696 Amino acid kinase family FI878_RS13270 PF02599 Global regulator protein family FI878_RS13275 PF01351 Ribonuclease HII FI878_RS13285 PF01292 Prokaryotic cytochrome b561 FI878_RS13290 PF00962 Adenosine/AMP deaminase FI878_RS13295 PF00860 Permease family FI878_RS13305 PF00743 Flavin-binding monooxygenase-like FI878_RS13310 PF00106 short chain dehydrogenase FI878_RS13320 PF17954 Quercetinase C-terminal cupin domain FI878_RS13320 PF02678 Pirin FI878_RS13325 PF17932 Tetracyclin repressor-like, C-terminal domain FI878_RS13325 PF00440 Bacterial regulatory proteins, tetR family FI878_RS13335 PF00106 short chain dehydrogenase FI878_RS13345 PF13610 DDE domain FI878_RS13355 PF00583 Acetyltransferase (GNAT) family FI878_RS13365 PF13610 DDE domain FI878_RS13375 PF02796 Helix-turn-helix domain of resolvase FI878_RS13375 PF00239 Resolvase, N terminal domain FI878_RS13385 PF13610 DDE domain FI878_RS13395 PF00583 Acetyltransferase (GNAT) family FI878_RS13405 PF13610 DDE domain FI878_RS13420 PF07992 Pyridine nucleotide-disulphide oxidoreductase FI878_RS13420 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FI878_RS13425 PF00764 Arginosuccinate synthase FI878_RS13430 PF01590 GAF domain FI878_RS13430 PF00360 Phytochrome region FI878_RS13430 PF00563 EAL domain FI878_RS13430 PF00990 Diguanylate cyclase, GGDEF domain FI878_RS13435 PF01979 Amidohydrolase family FI878_RS13440 PF00929 Exonuclease FI878_RS13450 PF07715 TonB-dependent Receptor Plug Domain FI878_RS13450 PF00593 TonB dependent receptor FI878_RS13455 PF07992 Pyridine nucleotide-disulphide oxidoreductase FI878_RS13455 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FI878_RS13460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FI878_RS13460 PF00005 ABC transporter FI878_RS13465 PF12911 N-terminal TM domain of oligopeptide transport permease C FI878_RS13465 PF00528 Binding-protein-dependent transport system inner membrane component FI878_RS13470 PF00528 Binding-protein-dependent transport system inner membrane component FI878_RS13475 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FI878_RS13480 PF01476 LysM domain FI878_RS13480 PF01476 LysM domain FI878_RS13480 PF01464 Transglycosylase SLT domain FI878_RS13480 PF01464 Transglycosylase SLT domain FI878_RS13485 PF00929 Exonuclease FI878_RS13495 PF09297 NADH pyrophosphatase zinc ribbon domain FI878_RS13495 PF00293 NUDIX domain FI878_RS13505 PF04972 BON domain FI878_RS13510 PF02021 Uncharacterised protein family UPF0102 FI878_RS13515 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FI878_RS13525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FI878_RS13525 PF03466 LysR substrate binding domain FI878_RS13530 PF01810 LysE type translocator FI878_RS13540 PF13411 MerR HTH family regulatory protein FI878_RS13550 PF01494 FAD binding domain FI878_RS13555 PF01494 FAD binding domain FI878_RS13560 PF00557 Metallopeptidase family M24 FI878_RS13560 PF05195 Aminopeptidase P, N-terminal domain FI878_RS13595 PF00884 Sulfatase FI878_RS13595 PF08019 Phosphoethanolamine transferase EptA/EptB FI878_RS13640 PF08525 Opacity-associated protein A N-terminal motif FI878_RS13640 PF01476 LysM domain FI878_RS13640 PF01551 Peptidase family M23 FI878_RS13965 PF01812 5-formyltetrahydrofolate cyclo-ligase family FI878_RS13975 PF13018 Extended Signal Peptide of Type V secretion system FI878_RS13975 PF05658 Head domain of trimeric autotransporter adhesin FI878_RS13975 PF05662 Coiled stalk of trimeric autotransporter adhesin FI878_RS13975 PF03895 YadA-like membrane anchor domain FI878_RS13980 PF02190 ATP-dependent protease La (LON) substrate-binding domain FI878_RS13980 PF00004 ATPase family associated with various cellular activities (AAA) FI878_RS13980 PF05362 Lon protease (S16) C-terminal proteolytic domain FI878_RS13990 PF02590 Predicted SPOUT methyltransferase FI878_RS13995 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase FI878_RS14005 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FI878_RS14005 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FI878_RS14010 PF04060 Putative Fe-S cluster FI878_RS14015 PF00633 Helix-hairpin-helix motif FI878_RS14015 PF00730 HhH-GPD superfamily base excision DNA repair protein FI878_RS14015 PF10576 Iron-sulfur binding domain of endonuclease III FI878_RS14025 PF05191 Adenylate kinase, active site lid FI878_RS14040 PF00905 Penicillin binding protein transpeptidase domain FI878_RS14040 PF03717 Penicillin-binding Protein dimerisation domain FI878_RS14055 PF02492 CobW/HypB/UreG, nucleotide-binding domain FI878_RS14060 PF01730 UreF FI878_RS14065 PF05194 UreE urease accessory protein, C-terminal domain FI878_RS14065 PF02814 UreE urease accessory protein, N-terminal domain FI878_RS14070 PF01979 Amidohydrolase family FI878_RS14070 PF00449 Urease alpha-subunit, N-terminal domain FI878_RS14075 PF00699 Urease beta subunit FI878_RS14080 PF00547 Urease, gamma subunit FI878_RS14085 PF01774 UreD urease accessory protein FI878_RS14100 PF00463 Isocitrate lyase family FI878_RS14105 PF03466 LysR substrate binding domain FI878_RS14105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FI878_RS14110 PF01595 Cyclin M transmembrane N-terminal domain FI878_RS14110 PF00571 CBS domain FI878_RS14110 PF03471 Transporter associated domain FI878_RS14115 PF03600 Citrate transporter FI878_RS14130 PF00009 Elongation factor Tu GTP binding domain FI878_RS14135 PF01507 Phosphoadenosine phosphosulfate reductase family FI878_RS14145 PF14052 Capsule assembly protein Wzi FI878_RS14150 PF01336 OB-fold nucleic acid binding domain FI878_RS14150 PF00152 tRNA synthetases class II (D, K and N) FI878_RS14165 PF00301 Rubredoxin FI878_RS14170 PF07992 Pyridine nucleotide-disulphide oxidoreductase FI878_RS14170 PF18113 Rubredoxin binding C-terminal domain FI878_RS14175 PF00561 alpha/beta hydrolase fold FI878_RS14180 PF03466 LysR substrate binding domain FI878_RS14180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FI878_RS14190 PF17941 Polyphosphate kinase C-terminal domain 1 FI878_RS14190 PF13090 Polyphosphate kinase C-terminal domain 2 FI878_RS14190 PF13089 Polyphosphate kinase N-terminal domain FI878_RS14190 PF02503 Polyphosphate kinase middle domain FI878_RS14195 PF00912 Transglycosylase FI878_RS14200 PF01694 Rhomboid family FI878_RS14210 PF00005 ABC transporter FI878_RS14215 PF13472 GDSL-like Lipase/Acylhydrolase family FI878_RS14220 PF00484 Carbonic anhydrase FI878_RS14225 PF00561 alpha/beta hydrolase fold FI878_RS14235 PF00593 TonB dependent receptor FI878_RS14235 PF07715 TonB-dependent Receptor Plug Domain FI878_RS14240 PF01106 NifU-like domain FI878_RS14240 PF01521 Iron-sulphur cluster biosynthesis FI878_RS14250 PF00884 Sulfatase FI878_RS14255 PF03781 Sulfatase-modifying factor enzyme 1 FI878_RS14270 PF00291 Pyridoxal-phosphate dependent enzyme FI878_RS14275 PF01384 Phosphate transporter family FI878_RS14280 PF02310 B12 binding domain FI878_RS14280 PF02574 Homocysteine S-methyltransferase FI878_RS14280 PF00809 Pterin binding enzyme FI878_RS14280 PF02965 Vitamin B12 dependent methionine synthase, activation domain FI878_RS14280 PF02607 B12 binding domain FI878_RS14285 PF02780 Transketolase, C-terminal domain FI878_RS14285 PF02779 Transketolase, pyrimidine binding domain FI878_RS14290 PF00456 Transketolase, thiamine diphosphate binding domain FI878_RS14295 PF07690 Major Facilitator Superfamily FI878_RS14305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FI878_RS14305 PF03466 LysR substrate binding domain FI878_RS14315 PF01263 Aldose 1-epimerase FI878_RS14320 PF07690 Major Facilitator Superfamily FI878_RS14325 PF12833 Helix-turn-helix domain FI878_RS14325 PF02311 AraC-like ligand binding domain FI878_RS14330 PF04960 Glutaminase FI878_RS14335 PF01327 Polypeptide deformylase FI878_RS14340 PF07690 Major Facilitator Superfamily FI878_RS14350 PF00205 Thiamine pyrophosphate enzyme, central domain FI878_RS14350 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FI878_RS14350 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FI878_RS14355 PF00171 Aldehyde dehydrogenase family FI878_RS14360 PF03447 Homoserine dehydrogenase, NAD binding domain FI878_RS14360 PF01958 Domain of unknown function DUF108 FI878_RS14370 PF12697 Alpha/beta hydrolase family FI878_RS14380 PF07690 Major Facilitator Superfamily FI878_RS14385 PF07992 Pyridine nucleotide-disulphide oxidoreductase FI878_RS14385 PF14759 Reductase C-terminal FI878_RS14390 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FI878_RS14400 PF00355 Rieske [2Fe-2S] domain FI878_RS14410 PF00355 Rieske [2Fe-2S] domain FI878_RS14415 PF09339 IclR helix-turn-helix domain FI878_RS14415 PF01614 Bacterial transcriptional regulator FI878_RS14430 PF00378 Enoyl-CoA hydratase/isomerase FI878_RS14440 PF00535 Glycosyl transferase family 2 FI878_RS14445 PF14883 Hypothetical glycosyl hydrolase family 13 FI878_RS14445 PF01522 Polysaccharide deacetylase FI878_RS14450 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FI878_RS14455 PF07152 YaeQ protein FI878_RS14460 PF00375 Sodium:dicarboxylate symporter family FI878_RS14465 PF02492 CobW/HypB/UreG, nucleotide-binding domain FI878_RS14465 PF07683 Cobalamin synthesis protein cobW C-terminal domain FI878_RS14475 PF03061 Thioesterase superfamily FI878_RS14485 PF02028 BCCT, betaine/carnitine/choline family transporter FI878_RS14490 PF02028 BCCT, betaine/carnitine/choline family transporter FI878_RS14495 PF13977 BetI-type transcriptional repressor, C-terminal FI878_RS14495 PF00440 Bacterial regulatory proteins, tetR family FI878_RS14500 PF00171 Aldehyde dehydrogenase family FI878_RS14505 PF05199 GMC oxidoreductase FI878_RS14505 PF00732 GMC oxidoreductase FI878_RS14510 PF06039 Malate:quinone oxidoreductase (Mqo) FI878_RS14520 PF02574 Homocysteine S-methyltransferase FI878_RS14525 PF13520 Amino acid permease FI878_RS14560 PF00701 Dihydrodipicolinate synthetase family FI878_RS14565 PF00083 Sugar (and other) transporter FI878_RS14685 PF00712 DNA polymerase III beta subunit, N-terminal domain FI878_RS14685 PF02767 DNA polymerase III beta subunit, central domain FI878_RS14685 PF02768 DNA polymerase III beta subunit, C-terminal domain FI878_RS14730 PF05016 ParE toxin of type II toxin-antitoxin system, parDE FI878_RS14925 PF01695 IstB-like ATP binding protein FI878_RS14935 PF00145 C-5 cytosine-specific DNA methylase FI878_RS15015 PF00929 Exonuclease FI878_RS15090 PF07690 Major Facilitator Superfamily FI878_RS15095 PF13533 Biotin-lipoyl like FI878_RS15100 PF03061 Thioesterase superfamily FI878_RS15105 PF00490 Delta-aminolevulinic acid dehydratase FI878_RS15110 PF01266 FAD dependent oxidoreductase FI878_RS15115 PF01370 NAD dependent epimerase/dehydratase family FI878_RS15115 PF08338 Domain of unknown function (DUF1731) FI878_RS15135 PF12320 Type 5 capsule protein repressor C-terminal domain FI878_RS15135 PF00149 Calcineurin-like phosphoesterase FI878_RS15145 PF01168 Alanine racemase, N-terminal domain FI878_RS15150 PF00437 Type II/IV secretion system protein FI878_RS15155 PF00437 Type II/IV secretion system protein FI878_RS15160 PF01475 Ferric uptake regulator family FI878_RS15165 PF04355 SmpA / OmlA family FI878_RS15170 PF03658 RnfH family Ubiquitin FI878_RS15180 PF01814 Hemerythrin HHE cation binding domain FI878_RS15185 PF13230 Glutamine amidotransferases class-II FI878_RS15195 PF00696 Amino acid kinase family FI878_RS15200 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FI878_RS15200 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FI878_RS15200 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FI878_RS15200 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FI878_RS15205 PF00692 dUTPase FI878_RS15210 PF00580 UvrD/REP helicase N-terminal domain FI878_RS15210 PF13361 UvrD-like helicase C-terminal domain FI878_RS15215 PF13488 Glycine zipper FI878_RS15215 PF00691 OmpA family FI878_RS15220 PF01553 Acyltransferase FI878_RS15230 PF03775 Septum formation inhibitor MinC, C-terminal domain FI878_RS15235 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FI878_RS15240 PF03776 Septum formation topological specificity factor MinE FI878_RS15255 PF01810 LysE type translocator FI878_RS15260 PF09397 Ftsk gamma domain FI878_RS15260 PF01580 FtsK/SpoIIIE family FI878_RS15260 PF17854 FtsK alpha domain FI878_RS15260 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FI878_RS15265 PF07992 Pyridine nucleotide-disulphide oxidoreductase FI878_RS15270 PF03588 Leucyl/phenylalanyl-tRNA protein transferase FI878_RS15275 PF04377 Arginine-tRNA-protein transferase, C terminus FI878_RS15275 PF04376 Arginine-tRNA-protein transferase, N terminus FI878_RS15280 PF00583 Acetyltransferase (GNAT) family FI878_RS15295 PF00009 Elongation factor Tu GTP binding domain FI878_RS15295 PF03144 Elongation factor Tu domain 2 FI878_RS15295 PF03143 Elongation factor Tu C-terminal domain FI878_RS15300 PF14492 Elongation Factor G, domain II FI878_RS15300 PF00679 Elongation factor G C-terminus FI878_RS15300 PF03144 Elongation factor Tu domain 2 FI878_RS15300 PF03764 Elongation factor G, domain IV FI878_RS15300 PF00009 Elongation factor Tu GTP binding domain FI878_RS15305 PF00177 Ribosomal protein S7p/S5e FI878_RS15310 PF00164 Ribosomal protein S12/S23 FI878_RS15320 PF00109 Beta-ketoacyl synthase, N-terminal domain FI878_RS15320 PF02801 Beta-ketoacyl synthase, C-terminal domain FI878_RS15330 PF02678 Pirin FI878_RS15330 PF05726 Pirin C-terminal cupin domain FI878_RS15340 PF02540 NAD synthase FI878_RS15340 PF00795 Carbon-nitrogen hydrolase FI878_RS15355 PF00175 Oxidoreductase NAD-binding domain FI878_RS15355 PF00111 2Fe-2S iron-sulfur cluster binding domain FI878_RS15355 PF00970 Oxidoreductase FAD-binding domain FI878_RS15360 PF00171 Aldehyde dehydrogenase family FI878_RS15365 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FI878_RS15365 PF00355 Rieske [2Fe-2S] domain FI878_RS15370 PF07859 alpha/beta hydrolase fold FI878_RS15375 PF02028 BCCT, betaine/carnitine/choline family transporter FI878_RS15380 PF00180 Isocitrate/isopropylmalate dehydrogenase FI878_RS15385 PF03466 LysR substrate binding domain FI878_RS15385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FI878_RS15405 PF00037 4Fe-4S binding domain FI878_RS15410 PF01467 Cytidylyltransferase-like FI878_RS15415 PF01668 SmpB protein FI878_RS15420 PF03358 NADPH-dependent FMN reductase FI878_RS15430 PF00849 RNA pseudouridylate synthase FI878_RS15430 PF01479 S4 domain FI878_RS15435 PF13525 Outer membrane lipoprotein FI878_RS15440 PF08278 DNA primase DnaG DnaB-binding FI878_RS15440 PF01807 CHC2 zinc finger FI878_RS15440 PF10410 DnaB-helicase binding domain of primase FI878_RS15440 PF08275 DNA primase catalytic core, N-terminal domain FI878_RS15445 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain FI878_RS15445 PF01488 Shikimate / quinate 5-dehydrogenase FI878_RS15445 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain FI878_RS15455 PF03550 Outer membrane lipoprotein LolB FI878_RS15460 PF08544 GHMP kinases C terminal FI878_RS15460 PF00288 GHMP kinases N terminal domain FI878_RS15480 PF14572 Phosphoribosyl synthetase-associated domain FI878_RS15480 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FI878_RS15485 PF01386 Ribosomal L25p family FI878_RS15490 PF01195 Peptidyl-tRNA hydrolase FI878_RS15495 PF02261 Aspartate decarboxylase FI878_RS15510 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FI878_RS15520 PF08543 Phosphomethylpyrimidine kinase FI878_RS15520 PF03070 TENA/THI-4/PQQC family FI878_RS15520 PF02581 Thiamine monophosphate synthase FI878_RS15525 PF01476 LysM domain FI878_RS15525 PF04972 BON domain FI878_RS15530 PF00550 Phosphopantetheine attachment site FI878_RS15540 PF00698 Acyl transferase domain FI878_RS15545 PF01783 Ribosomal L32p protein family FI878_RS15550 PF02620 Large ribosomal RNA subunit accumulation protein YceD FI878_RS15555 PF04315 Elongation factor P hydroxylase FI878_RS15560 PF01300 Telomere recombination FI878_RS15565 PF02616 Segregation and condensation protein ScpA FI878_RS15570 PF04079 Segregation and condensation complex subunit ScpB FI878_RS15575 PF00849 RNA pseudouridylate synthase FI878_RS15575 PF01479 S4 domain FI878_RS15590 PF00155 Aminotransferase class I and II FI878_RS15595 PF04055 Radical SAM superfamily FI878_RS15595 PF06968 Biotin and Thiamin Synthesis associated domain FI878_RS15595 PF00202 Aminotransferase class-III FI878_RS15600 PF08241 Methyltransferase domain FI878_RS15600 PF12697 Alpha/beta hydrolase family FI878_RS15605 PF02358 Trehalose-phosphatase FI878_RS15610 PF00982 Glycosyltransferase family 20 FI878_RS15615 PF07690 Major Facilitator Superfamily FI878_RS15620 PF00210 Ferritin-like domain FI878_RS15625 PF12826 Helix-hairpin-helix motif FI878_RS15625 PF03119 NAD-dependent DNA ligase C4 zinc finger domain FI878_RS15625 PF03120 NAD-dependent DNA ligase OB-fold domain FI878_RS15625 PF01653 NAD-dependent DNA ligase adenylation domain FI878_RS15625 PF00533 BRCA1 C Terminus (BRCT) domain FI878_RS15635 PF02463 RecF/RecN/SMC N terminal domain FI878_RS15635 PF06470 SMC proteins Flexible Hinge Domain FI878_RS15645 PF01925 Sulfite exporter TauE/SafE FI878_RS15655 PF03309 Type III pantothenate kinase FI878_RS15660 PF02978 Signal peptide binding domain FI878_RS15660 PF02881 SRP54-type protein, helical bundle domain FI878_RS15660 PF00448 SRP54-type protein, GTPase domain FI878_RS15670 PF01207 Dihydrouridine synthase (Dus) FI878_RS15700 PF00692 dUTPase FI878_RS15715 PF01048 Phosphorylase superfamily FI878_RS15720 PF10609 NUBPL iron-transfer P-loop NTPase FI878_RS15730 PF01588 Putative tRNA binding domain FI878_RS15730 PF09334 tRNA synthetases class I (M) FI878_RS15755 PF13533 Biotin-lipoyl like FI878_RS15760 PF00291 Pyridoxal-phosphate dependent enzyme FI878_RS15775 PF05552 Conserved TM helix FI878_RS15790 PF00175 Oxidoreductase NAD-binding domain FI878_RS15790 PF00970 Oxidoreductase FAD-binding domain FI878_RS15795 PF03466 LysR substrate binding domain FI878_RS15795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FI878_RS15800 PF00313 'Cold-shock' DNA-binding domain FI878_RS15810 PF00361 Proton-conducting membrane transporter FI878_RS15815 PF00361 Proton-conducting membrane transporter FI878_RS15820 PF00361 Proton-conducting membrane transporter FI878_RS15820 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FI878_RS15825 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FI878_RS15830 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 FI878_RS15835 PF12838 4Fe-4S dicluster domain FI878_RS15840 PF00146 NADH dehydrogenase FI878_RS15845 PF00384 Molybdopterin oxidoreductase FI878_RS15845 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FI878_RS15845 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FI878_RS15850 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FI878_RS15850 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FI878_RS15850 PF10531 SLBB domain FI878_RS15860 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FI878_RS15860 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FI878_RS15865 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FI878_RS15870 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 FI878_RS15875 PF17151 Periplasmic sensor domain FI878_RS15875 PF00990 Diguanylate cyclase, GGDEF domain FI878_RS15885 PF00512 His Kinase A (phospho-acceptor) domain FI878_RS15885 PF00672 HAMP domain FI878_RS15885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FI878_RS15890 PF00072 Response regulator receiver domain FI878_RS15890 PF00486 Transcriptional regulatory protein, C terminal FI878_RS15900 PF03477 ATP cone domain FI878_RS15900 PF00317 Ribonucleotide reductase, all-alpha domain FI878_RS15900 PF02867 Ribonucleotide reductase, barrel domain FI878_RS15910 PF00268 Ribonucleotide reductase, small chain FI878_RS15920 PF13756 Stimulus-sensing domain FI878_RS15920 PF00512 His Kinase A (phospho-acceptor) domain FI878_RS15920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FI878_RS15920 PF00672 HAMP domain FI878_RS15920 PF13755 Sensor N-terminal transmembrane domain FI878_RS15975 PF12762 ISXO2-like transposase domain FI878_RS16005 PF01011 PQQ enzyme repeat FI878_RS16005 PF13360 PQQ-like domain FI878_RS16025 PF02567 Phenazine biosynthesis-like protein FI878_RS16045 PF01613 Flavin reductase like domain FI878_RS16050 PF08267 Cobalamin-independent synthase, N-terminal domain FI878_RS16050 PF01717 Cobalamin-independent synthase, Catalytic domain FI878_RS16060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FI878_RS16060 PF03466 LysR substrate binding domain FI878_RS16065 PF01810 LysE type translocator FI878_RS16075 PF12833 Helix-turn-helix domain FI878_RS16075 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term FI878_RS16080 PF07687 Peptidase dimerisation domain FI878_RS16080 PF01546 Peptidase family M20/M25/M40 FI878_RS16090 PF03466 LysR substrate binding domain FI878_RS16090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FI878_RS16095 PF07690 Major Facilitator Superfamily FI878_RS16105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FI878_RS16105 PF03466 LysR substrate binding domain FI878_RS16110 PF14537 Cytochrome c3 FI878_RS16110 PF00890 FAD binding domain FI878_RS16120 PF02515 CoA-transferase family III FI878_RS16125 PF07690 Major Facilitator Superfamily FI878_RS16130 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FI878_RS16130 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FI878_RS16130 PF02770 Acyl-CoA dehydrogenase, middle domain FI878_RS16135 PF03466 LysR substrate binding domain FI878_RS16135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FI878_RS16140 PF08240 Alcohol dehydrogenase GroES-like domain FI878_RS16140 PF00107 Zinc-binding dehydrogenase FI878_RS16145 PF00962 Adenosine/AMP deaminase FI878_RS16170 PF02445 Quinolinate synthetase A protein FI878_RS16175 PF01960 ArgJ family FI878_RS16180 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FI878_RS16180 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FI878_RS16185 PF00893 Small Multidrug Resistance protein FI878_RS16195 PF05275 Copper resistance protein B precursor (CopB) FI878_RS16200 PF00394 Multicopper oxidase FI878_RS16200 PF07731 Multicopper oxidase FI878_RS16200 PF07732 Multicopper oxidase FI878_RS16215 PF00834 Ribulose-phosphate 3 epimerase family FI878_RS16225 PF00756 Putative esterase FI878_RS16235 PF04445 Putative SAM-dependent methyltransferase FI878_RS16240 PF00814 Glycoprotease family FI878_RS16245 PF00132 Bacterial transferase hexapeptide (six repeats) FI878_RS16250 PF00293 NUDIX domain FI878_RS16290 PF04715 Anthranilate synthase component I, N terminal region FI878_RS16290 PF00425 chorismate binding enzyme FI878_RS16295 PF00155 Aminotransferase class I and II FI878_RS16300 PF00815 Histidinol dehydrogenase FI878_RS16305 PF01634 ATP phosphoribosyltransferase FI878_RS16310 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FI878_RS16315 PF01722 BolA-like protein FI878_RS16320 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FI878_RS16325 PF04552 Sigma-54, DNA binding domain FI878_RS16325 PF04963 Sigma-54 factor, core binding domain FI878_RS16325 PF00309 Sigma-54 factor, Activator interacting domain (AID) FI878_RS16370 PF00795 Carbon-nitrogen hydrolase FI878_RS16380 PF01047 MarR family FI878_RS16385 PF02566 OsmC-like protein FI878_RS16390 PF00437 Type II/IV secretion system protein FI878_RS16410 PF01612 3'-5' exonuclease FI878_RS16410 PF00476 DNA polymerase family A FI878_RS16410 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FI878_RS16410 PF01367 5'-3' exonuclease, C-terminal SAM fold FI878_RS16415 PF02325 YGGT family FI878_RS16420 PF03807 NADP oxidoreductase coenzyme F420-dependent FI878_RS16420 PF14748 Pyrroline-5-carboxylate reductase dimerisation FI878_RS16425 PF11734 TilS substrate C-terminal domain FI878_RS16425 PF09179 TilS substrate binding domain FI878_RS16425 PF01171 PP-loop family FI878_RS16430 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FI878_RS16435 PF02541 Ppx/GppA phosphatase family FI878_RS16440 PF00085 Thioredoxin FI878_RS16445 PF07497 Rho termination factor, RNA-binding domain FI878_RS16445 PF07498 Rho termination factor, N-terminal domain FI878_RS16445 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FI878_RS16460 PF00216 Bacterial DNA-binding protein FI878_RS16465 PF03147 Ferredoxin-fold anticodon binding domain FI878_RS16465 PF01588 Putative tRNA binding domain FI878_RS16465 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FI878_RS16465 PF03484 tRNA synthetase B5 domain FI878_RS16465 PF03483 B3/4 domain FI878_RS16470 PF01409 tRNA synthetases class II core domain (F) FI878_RS16470 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FI878_RS16490 PF00453 Ribosomal protein L20 FI878_RS16495 PF01632 Ribosomal protein L35 FI878_RS16500 PF07690 Major Facilitator Superfamily FI878_RS16505 PF09335 SNARE associated Golgi protein FI878_RS16510 PF02798 Glutathione S-transferase, N-terminal domain FI878_RS16510 PF00043 Glutathione S-transferase, C-terminal domain FI878_RS16515 PF00707 Translation initiation factor IF-3, C-terminal domain FI878_RS16515 PF05198 Translation initiation factor IF-3, N-terminal domain FI878_RS16520 PF03129 Anticodon binding domain FI878_RS16520 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FI878_RS16520 PF02824 TGS domain FI878_RS16520 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FI878_RS16525 PF00501 AMP-binding enzyme FI878_RS16525 PF13193 AMP-binding enzyme C-terminal domain FI878_RS16530 PF04751 Protein of unknown function (DUF615) FI878_RS16535 PF00381 PTS HPr component phosphorylation site FI878_RS16540 PF03668 P-loop ATPase protein family FI878_RS16545 PF02569 Pantoate-beta-alanine ligase FI878_RS16550 PF02548 Ketopantoate hydroxymethyltransferase FI878_RS16555 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FI878_RS16560 PF12626 Polymerase A arginine-rich C-terminus FI878_RS16560 PF12627 Probable RNA and SrmB- binding site of polymerase A FI878_RS16560 PF01743 Poly A polymerase head domain FI878_RS16570 PF03819 MazG nucleotide pyrophosphohydrolase domain FI878_RS16580 PF13291 ACT domain FI878_RS16580 PF04607 Region found in RelA / SpoT proteins FI878_RS16580 PF02824 TGS domain FI878_RS16585 PF05958 tRNA (Uracil-5-)-methyltransferase FI878_RS16595 PF00291 Pyridoxal-phosphate dependent enzyme FI878_RS16600 PF00512 His Kinase A (phospho-acceptor) domain FI878_RS16600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FI878_RS16600 PF00672 HAMP domain FI878_RS16600 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FI878_RS16600 PF01627 Hpt domain FI878_RS16600 PF00072 Response regulator receiver domain FI878_RS16605 PF00378 Enoyl-CoA hydratase/isomerase FI878_RS16610 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FI878_RS16610 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FI878_RS16615 PF01261 Xylose isomerase-like TIM barrel FI878_RS16625 PF00106 short chain dehydrogenase FI878_RS16630 PF02233 NAD(P) transhydrogenase beta subunit FI878_RS16635 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch FI878_RS16640 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FI878_RS16640 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FI878_RS16645 PF12762 ISXO2-like transposase domain FI878_RS16650 PF00892 EamA-like transporter family FI878_RS16660 PF07690 Major Facilitator Superfamily FI878_RS16665 PF01207 Dihydrouridine synthase (Dus) FI878_RS16675 PF03466 LysR substrate binding domain FI878_RS16675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FI878_RS16685 PF00899 ThiF family FI878_RS16695 PF00330 Aconitase family (aconitate hydratase) FI878_RS16695 PF00694 Aconitase C-terminal domain FI878_RS16700 PF01026 TatD related DNase FI878_RS16715 PF00009 Elongation factor Tu GTP binding domain FI878_RS16715 PF03144 Elongation factor Tu domain 2 FI878_RS16715 PF16658 Class II release factor RF3, C-terminal domain FI878_RS16735 PF12762 ISXO2-like transposase domain FI878_RS16740 PF03707 Bacterial signalling protein N terminal repeat FI878_RS16740 PF00990 Diguanylate cyclase, GGDEF domain FI878_RS16740 PF00563 EAL domain FI878_RS16745 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FI878_RS16745 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FI878_RS16750 PF10369 Small subunit of acetolactate synthase FI878_RS16755 PF00205 Thiamine pyrophosphate enzyme, central domain FI878_RS16755 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FI878_RS16755 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FI878_RS16765 PF00133 tRNA synthetases class I (I, L, M and V) FI878_RS16765 PF13603 Leucyl-tRNA synthetase, Domain 2 FI878_RS16765 PF09334 tRNA synthetases class I (M) FI878_RS16765 PF08264 Anticodon-binding domain of tRNA FI878_RS16780 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FI878_RS16785 PF12704 MacB-like periplasmic core domain FI878_RS16785 PF02687 FtsX-like permease family FI878_RS16785 PF00005 ABC transporter FI878_RS16790 PF02321 Outer membrane efflux protein FI878_RS16805 PF00929 Exonuclease FI878_RS16810 PF03193 RsgA GTPase FI878_RS16820 PF00462 Glutaredoxin FI878_RS16825 PF02556 Preprotein translocase subunit SecB FI878_RS16840 PF02801 Beta-ketoacyl synthase, C-terminal domain FI878_RS16840 PF00109 Beta-ketoacyl synthase, N-terminal domain FI878_RS16855 PF00109 Beta-ketoacyl synthase, N-terminal domain FI878_RS16855 PF02801 Beta-ketoacyl synthase, C-terminal domain FI878_RS16865 PF04820 Tryptophan halogenase FI878_RS16885 PF00221 Aromatic amino acid lyase FI878_RS16900 PF13193 AMP-binding enzyme C-terminal domain FI878_RS16900 PF00501 AMP-binding enzyme FI878_RS16910 PF00550 Phosphopantetheine attachment site FI878_RS16915 PF00550 Phosphopantetheine attachment site FI878_RS16930 PF01926 50S ribosome-binding GTPase FI878_RS16930 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FI878_RS16935 PF13360 PQQ-like domain FI878_RS16945 PF13393 Histidyl-tRNA synthetase FI878_RS16945 PF03129 Anticodon binding domain FI878_RS16950 PF04551 GcpE protein FI878_RS16955 PF13464 Domain of unknown function (DUF4115) FI878_RS16965 PF04055 Radical SAM superfamily FI878_RS16970 PF00334 Nucleoside diphosphate kinase FI878_RS16975 PF04384 Iron-sulphur cluster assembly FI878_RS16980 PF01569 PAP2 superfamily FI878_RS16985 PF00534 Glycosyl transferases group 1 FI878_RS16985 PF13439 Glycosyltransferase Family 4 FI878_RS16990 PF00595 PDZ domain FI878_RS16990 PF11818 C-terminal domain of tail specific protease (DUF3340) FI878_RS16990 PF17804 Tail specific protease N-terminal domain FI878_RS16990 PF03572 Peptidase family S41 FI878_RS16995 PF00933 Glycosyl hydrolase family 3 N terminal domain FI878_RS17005 PF00561 alpha/beta hydrolase fold FI878_RS17010 PF00171 Aldehyde dehydrogenase family FI878_RS17015 PF00171 Aldehyde dehydrogenase family FI878_RS17020 PF01202 Shikimate kinase FI878_RS17025 PF02447 GntP family permease FI878_RS17030 PF01081 KDPG and KHG aldolase FI878_RS17035 PF00920 Dehydratase family FI878_RS17045 PF00871 Acetokinase family FI878_RS17050 PF07085 DRTGG domain FI878_RS17050 PF01515 Phosphate acetyl/butaryl transferase FI878_RS17055 PF05681 Fumarate hydratase (Fumerase) FI878_RS17055 PF05683 Fumarase C-terminus FI878_RS17070 PF07724 AAA domain (Cdc48 subfamily) FI878_RS17070 PF06689 ClpX C4-type zinc finger FI878_RS17070 PF10431 C-terminal, D2-small domain, of ClpB protein FI878_RS17075 PF00574 Clp protease FI878_RS17080 PF05697 Bacterial trigger factor protein (TF) FI878_RS17080 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FI878_RS17080 PF05698 Bacterial trigger factor protein (TF) C-terminus FI878_RS17085 PF07715 TonB-dependent Receptor Plug Domain FI878_RS17085 PF00593 TonB dependent receptor FI878_RS17090 PF18331 PKHD-type hydroxylase C-terminal domain FI878_RS17090 PF13640 2OG-Fe(II) oxygenase superfamily FI878_RS17095 PF00682 HMGL-like FI878_RS17095 PF08502 LeuA allosteric (dimerisation) domain FI878_RS17100 PF00561 alpha/beta hydrolase fold FI878_RS17105 PF00561 alpha/beta hydrolase fold FI878_RS17105 PF07021 Methionine biosynthesis protein MetW FI878_RS17115 PF01725 Ham1 family FI878_RS17125 PF02416 mttA/Hcf106 family FI878_RS17130 PF02416 mttA/Hcf106 family FI878_RS17135 PF00902 Sec-independent protein translocase protein (TatC) FI878_RS17155 PF01790 Prolipoprotein diacylglyceryl transferase FI878_RS17170 PF00303 Thymidylate synthase FI878_RS17175 PF00186 Dihydrofolate reductase FI878_RS17185 PF01625 Peptide methionine sulfoxide reductase FI878_RS17195 PF01618 MotA/TolQ/ExbB proton channel family FI878_RS17205 PF00551 Formyl transferase FI878_RS17205 PF01842 ACT domain FI878_RS17215 PF00171 Aldehyde dehydrogenase family FI878_RS17220 PF00830 Ribosomal L28 family FI878_RS17225 PF00471 Ribosomal protein L33 FI878_RS17230 PF00999 Sodium/hydrogen exchanger family FI878_RS17230 PF02254 TrkA-N domain FI878_RS17250 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) FI878_RS17255 PF00580 UvrD/REP helicase N-terminal domain FI878_RS17255 PF13361 UvrD-like helicase C-terminal domain FI878_RS17270 PF01396 Topoisomerase DNA binding C4 zinc finger FI878_RS17270 PF08272 Topoisomerase I zinc-ribbon-like FI878_RS17270 PF01751 Toprim domain FI878_RS17270 PF01131 DNA topoisomerase FI878_RS17280 PF01638 HxlR-like helix-turn-helix FI878_RS17285 PF00107 Zinc-binding dehydrogenase FI878_RS17285 PF08240 Alcohol dehydrogenase GroES-like domain FI878_RS17290 PF04102 SlyX FI878_RS17300 PF01810 LysE type translocator FI878_RS17305 PF03279 Bacterial lipid A biosynthesis acyltransferase FI878_RS17315 PF00375 Sodium:dicarboxylate symporter family FI878_RS17325 PF02774 Semialdehyde dehydrogenase, dimerisation domain FI878_RS17325 PF01118 Semialdehyde dehydrogenase, NAD binding domain FI878_RS17345 PF01416 tRNA pseudouridine synthase FI878_RS17355 PF01176 Translation initiation factor 1A / IF-1 FI878_RS17370 PF00180 Isocitrate/isopropylmalate dehydrogenase FI878_RS17380 PF00694 Aconitase C-terminal domain FI878_RS17385 PF00330 Aconitase family (aconitate hydratase) FI878_RS17395 PF03466 LysR substrate binding domain FI878_RS17395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FI878_RS17415 PF00293 NUDIX domain FI878_RS17420 PF00391 PEP-utilising enzyme, mobile domain FI878_RS17420 PF05524 PEP-utilising enzyme, N-terminal FI878_RS17420 PF01590 GAF domain FI878_RS17420 PF02896 PEP-utilising enzyme, TIM barrel domain FI878_RS17425 PF00141 Peroxidase FI878_RS17430 PF12706 Beta-lactamase superfamily domain FI878_RS17435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FI878_RS17435 PF03466 LysR substrate binding domain FI878_RS17445 PF02798 Glutathione S-transferase, N-terminal domain FI878_RS17450 PF13280 WYL domain FI878_RS17450 PF08279 HTH domain FI878_RS17455 PF13419 Haloacid dehalogenase-like hydrolase FI878_RS17460 PF00849 RNA pseudouridylate synthase FI878_RS17460 PF01479 S4 domain FI878_RS17465 PF00575 S1 RNA binding domain FI878_RS17465 PF12111 Polyribonucleotide phosphorylase C terminal FI878_RS17465 PF10150 Ribonuclease E/G family FI878_RS17470 PF00501 AMP-binding enzyme FI878_RS17470 PF13193 AMP-binding enzyme C-terminal domain FI878_RS17485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FI878_RS17485 PF03466 LysR substrate binding domain FI878_RS17490 PF00106 short chain dehydrogenase FI878_RS17495 PF04055 Radical SAM superfamily FI878_RS17495 PF06969 HemN C-terminal domain FI878_RS17505 PF01554 MatE FI878_RS17510 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FI878_RS17510 PF02770 Acyl-CoA dehydrogenase, middle domain FI878_RS17510 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FI878_RS17515 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FI878_RS17515 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FI878_RS17520 PF03109 ABC1 family FI878_RS17525 PF01197 Ribosomal protein L31 FI878_RS17540 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FI878_RS17560 PF03884 DNA gyrase inhibitor YacG FI878_RS17565 PF00753 Metallo-beta-lactamase superfamily FI878_RS17570 PF00762 Ferrochelatase FI878_RS17580 PF01177 Asp/Glu/Hydantoin racemase FI878_RS17595 PF01206 Sulfurtransferase TusA FI878_RS17600 PF00571 CBS domain FI878_RS17600 PF03471 Transporter associated domain FI878_RS17605 PF00795 Carbon-nitrogen hydrolase FI878_RS17610 PF01588 Putative tRNA binding domain FI878_RS17620 PF07963 Prokaryotic N-terminal methylation motif FI878_RS17620 PF08334 Type II secretion system (T2SS), protein G FI878_RS17625 PF00482 Type II secretion system (T2SS), protein F FI878_RS17630 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FI878_RS17630 PF18074 Primosomal protein N C-terminal domain FI878_RS17630 PF00270 DEAD/DEAH box helicase FI878_RS17630 PF00271 Helicase conserved C-terminal domain FI878_RS17630 PF17764 3′ DNA-binding domain (3′BD) FI878_RS17635 PF02254 TrkA-N domain FI878_RS17635 PF00999 Sodium/hydrogen exchanger family FI878_RS17640 PF01430 Hsp33 protein FI878_RS17650 PF01556 DnaJ C terminal domain FI878_RS17650 PF00226 DnaJ domain FI878_RS17660 PF01544 CorA-like Mg2+ transporter protein FI878_RS17665 PF01138 3' exoribonuclease family, domain 1 FI878_RS17665 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FI878_RS17665 PF03725 3' exoribonuclease family, domain 2 FI878_RS17665 PF00013 KH domain FI878_RS17665 PF00575 S1 RNA binding domain FI878_RS17670 PF00312 Ribosomal protein S15 FI878_RS17680 PF13538 UvrD-like helicase C-terminal domain FI878_RS17685 PF00580 UvrD/REP helicase N-terminal domain FI878_RS17685 PF13361 UvrD-like helicase C-terminal domain FI878_RS17685 PF12705 PD-(D/E)XK nuclease superfamily FI878_RS17690 PF17946 RecC C-terminal domain FI878_RS17700 PF03976 Polyphosphate kinase 2 (PPK2) FI878_RS17710 PF01209 ubiE/COQ5 methyltransferase family FI878_RS17720 PF03109 ABC1 family FI878_RS17725 PF01494 FAD binding domain FI878_RS17730 PF01502 Phosphoribosyl-AMP cyclohydrolase FI878_RS17745 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FI878_RS17745 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter FI878_RS17745 PF13244 Domain of unknown function (DUF4040) FI878_RS17745 PF00361 Proton-conducting membrane transporter FI878_RS17750 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FI878_RS17755 PF00361 Proton-conducting membrane transporter FI878_RS17765 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) FI878_RS17775 PF02033 Ribosome-binding factor A FI878_RS17780 PF11987 Translation-initiation factor 2 FI878_RS17780 PF00009 Elongation factor Tu GTP binding domain FI878_RS17780 PF08364 Bacterial translation initiation factor IF-2 associated region FI878_RS17780 PF04760 Translation initiation factor IF-2, N-terminal region FI878_RS17785 PF13184 NusA-like KH domain FI878_RS17785 PF00575 S1 RNA binding domain FI878_RS17785 PF08529 NusA N-terminal domain FI878_RS17790 PF02576 RimP N-terminal domain FI878_RS17790 PF17384 RimP C-terminal SH3 domain FI878_RS17810 PF03840 Preprotein translocase SecG subunit FI878_RS17815 PF00121 Triosephosphate isomerase FI878_RS17820 PF00437 Type II/IV secretion system protein FI878_RS17820 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FI878_RS17825 PF00482 Type II secretion system (T2SS), protein F FI878_RS17830 PF06750 Bacterial Peptidase A24 N-terminal domain FI878_RS17830 PF01478 Type IV leader peptidase family FI878_RS17835 PF01121 Dephospho-CoA kinase FI878_RS17845 PF00588 SpoU rRNA Methylase family FI878_RS17845 PF08032 RNA 2'-O ribose methyltransferase substrate binding FI878_RS17850 PF06865 Pyrimidine/purine nucleoside phosphorylase FI878_RS17860 PF02463 RecF/RecN/SMC N terminal domain FI878_RS17865 PF02622 Uncharacterized ACR, COG1678 FI878_RS17870 PF03652 Holliday junction resolvase FI878_RS17875 PF13533 Biotin-lipoyl like FI878_RS17900 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FI878_RS17900 PF02805 Metal binding domain of Ada FI878_RS17900 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FI878_RS17900 PF12833 Helix-turn-helix domain FI878_RS17905 PF01066 CDP-alcohol phosphatidyltransferase FI878_RS17915 PF08459 UvrC Helix-hairpin-helix N-terminal FI878_RS17915 PF02151 UvrB/uvrC motif FI878_RS17915 PF01541 GIY-YIG catalytic domain FI878_RS17935 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FI878_RS17935 PF00378 Enoyl-CoA hydratase/isomerase FI878_RS17935 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FI878_RS17940 PF02803 Thiolase, C-terminal domain FI878_RS17940 PF00108 Thiolase, N-terminal domain FI878_RS17960 PF09278 MerR, DNA binding FI878_RS17960 PF00376 MerR family regulatory protein FI878_RS17970 PF01323 DSBA-like thioredoxin domain FI878_RS17985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FI878_RS17985 PF00183 Hsp90 protein FI878_RS18000 PF03553 Na+/H+ antiporter family FI878_RS18000 PF13726 Na+-H+ antiporter family FI878_RS18005 PF00561 alpha/beta hydrolase fold FI878_RS18035 PF04998 RNA polymerase Rpb1, domain 5 FI878_RS18035 PF05000 RNA polymerase Rpb1, domain 4 FI878_RS18035 PF04983 RNA polymerase Rpb1, domain 3 FI878_RS18035 PF00623 RNA polymerase Rpb1, domain 2 FI878_RS18035 PF04997 RNA polymerase Rpb1, domain 1 FI878_RS18040 PF04563 RNA polymerase beta subunit FI878_RS18040 PF04561 RNA polymerase Rpb2, domain 2 FI878_RS18040 PF04565 RNA polymerase Rpb2, domain 3 FI878_RS18040 PF10385 RNA polymerase beta subunit external 1 domain FI878_RS18040 PF00562 RNA polymerase Rpb2, domain 6 FI878_RS18040 PF04560 RNA polymerase Rpb2, domain 7 FI878_RS18045 PF16320 Ribosomal protein L7/L12 dimerisation domain FI878_RS18045 PF00542 Ribosomal protein L7/L12 C-terminal domain FI878_RS18050 PF00466 Ribosomal protein L10 FI878_RS18055 PF00687 Ribosomal protein L1p/L10e family FI878_RS18060 PF03946 Ribosomal protein L11, N-terminal domain FI878_RS18060 PF00298 Ribosomal protein L11, RNA binding domain FI878_RS18065 PF00467 KOW motif FI878_RS18065 PF02357 Transcription termination factor nusG FI878_RS18070 PF00584 SecE/Sec61-gamma subunits of protein translocation complex FI878_RS18080 PF00009 Elongation factor Tu GTP binding domain FI878_RS18080 PF03144 Elongation factor Tu domain 2 FI878_RS18080 PF03143 Elongation factor Tu C-terminal domain FI878_RS18105 PF04715 Anthranilate synthase component I, N terminal region FI878_RS18105 PF00425 chorismate binding enzyme FI878_RS18110 PF13419 Haloacid dehalogenase-like hydrolase FI878_RS18115 PF00498 FHA domain FI878_RS18115 PF12401 Protein of unknown function (DUF2662) FI878_RS18120 PF00263 Bacterial type II and III secretion system protein FI878_RS18120 PF03958 Bacterial type II/III secretion system short domain FI878_RS18135 PF00816 H-NS histone family FI878_RS18160 PF03900 Porphobilinogen deaminase, C-terminal domain FI878_RS18160 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FI878_RS18165 PF04397 LytTr DNA-binding domain FI878_RS18165 PF00072 Response regulator receiver domain FI878_RS18170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FI878_RS18170 PF07694 5TMR of 5TMR-LYT FI878_RS18170 PF06580 Histidine kinase FI878_RS18175 PF14698 Argininosuccinate lyase C-terminal FI878_RS18175 PF00206 Lyase FI878_RS18180 PF04362 Bacterial Fe(2+) trafficking FI878_RS18185 PF01895 PhoU domain FI878_RS18190 PF02321 Outer membrane efflux protein FI878_RS18195 PF00892 EamA-like transporter family FI878_RS18210 PF01964 Radical SAM ThiC family FI878_RS18210 PF13667 ThiC-associated domain FI878_RS18215 PF00293 NUDIX domain FI878_RS18220 PF00149 Calcineurin-like phosphoesterase FI878_RS18225 PF01258 Prokaryotic dksA/traR C4-type zinc finger FI878_RS18230 PF00749 tRNA synthetases class I (E and Q), catalytic domain FI878_RS18235 PF01098 Cell cycle protein FI878_RS18240 PF02875 Mur ligase family, glutamate ligase domain FI878_RS18240 PF08245 Mur ligase middle domain FI878_RS18250 PF07664 Ferrous iron transport protein B C terminus FI878_RS18250 PF02421 Ferrous iron transport protein B FI878_RS18250 PF07670 Nucleoside recognition FI878_RS18260 PF02899 Phage integrase, N-terminal SAM-like domain FI878_RS18260 PF00589 Phage integrase family FI878_RS18265 PF10411 Disulfide bond isomerase protein N-terminus FI878_RS18265 PF13098 Thioredoxin-like domain FI878_RS18270 PF01842 ACT domain FI878_RS18270 PF00742 Homoserine dehydrogenase FI878_RS18270 PF03447 Homoserine dehydrogenase, NAD binding domain FI878_RS18275 PF00291 Pyridoxal-phosphate dependent enzyme FI878_RS18280 PF00768 D-alanyl-D-alanine carboxypeptidase FI878_RS18285 PF00072 Response regulator receiver domain FI878_RS18285 PF00196 Bacterial regulatory proteins, luxR family FI878_RS18290 PF00512 His Kinase A (phospho-acceptor) domain FI878_RS18290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FI878_RS18295 PF00158 Sigma-54 interaction domain FI878_RS18295 PF00072 Response regulator receiver domain FI878_RS18295 PF02954 Bacterial regulatory protein, Fis family FI878_RS18300 PF03572 Peptidase family S41 FI878_RS18300 PF00595 PDZ domain FI878_RS18305 PF06415 BPG-independent PGAM N-terminus (iPGM_N) FI878_RS18305 PF01676 Metalloenzyme superfamily FI878_RS18310 PF03739 Lipopolysaccharide export system permease LptF/LptG FI878_RS18320 PF02789 Cytosol aminopeptidase family, N-terminal domain FI878_RS18320 PF00883 Cytosol aminopeptidase family, catalytic domain FI878_RS18340 PF00677 Lumazine binding domain FI878_RS18350 PF01872 RibD C-terminal domain FI878_RS18350 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FI878_RS18355 PF03477 ATP cone domain FI878_RS18360 PF00909 Ammonium Transporter Family FI878_RS18365 PF00543 Nitrogen regulatory protein P-II FI878_RS18375 PF13335 Magnesium chelatase, subunit ChlI C-terminal FI878_RS18375 PF01078 Magnesium chelatase, subunit ChlI FI878_RS18385 PF01636 Phosphotransferase enzyme family FI878_RS18390 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase FI878_RS18415 PF02909 Tetracyclin repressor-like, C-terminal domain FI878_RS18415 PF00440 Bacterial regulatory proteins, tetR family FI878_RS18420 PF07690 Major Facilitator Superfamily FI878_RS18435 PF00905 Penicillin binding protein transpeptidase domain FI878_RS18460 PF00916 Sulfate permease family FI878_RS18460 PF01740 STAS domain FI878_RS18465 PF00582 Universal stress protein family FI878_RS18490 PF12762 ISXO2-like transposase domain FI878_RS18505 PF01078 Magnesium chelatase, subunit ChlI FI878_RS18505 PF13335 Magnesium chelatase, subunit ChlI C-terminal FI878_RS18510 PF00392 Bacterial regulatory proteins, gntR family FI878_RS18510 PF00155 Aminotransferase class I and II FI878_RS18520 PF00701 Dihydrodipicolinate synthetase family FI878_RS18530 PF03573 outer membrane porin, OprD family FI878_RS18535 PF00719 Inorganic pyrophosphatase FI878_RS18550 PF00501 AMP-binding enzyme FI878_RS18550 PF13193 AMP-binding enzyme C-terminal domain FI878_RS18555 PF00521 DNA gyrase/topoisomerase IV, subunit A FI878_RS18555 PF03989 DNA gyrase C-terminal domain, beta-propeller FI878_RS18560 PF07690 Major Facilitator Superfamily FI878_RS18565 PF03458 UPF0126 domain FI878_RS18570 PF02810 SEC-C motif FI878_RS18575 PF03471 Transporter associated domain FI878_RS18575 PF03741 Integral membrane protein TerC family FI878_RS18580 PF03641 Possible lysine decarboxylase FI878_RS18585 PF07690 Major Facilitator Superfamily FI878_RS18595 PF11799 impB/mucB/samB family C-terminal domain FI878_RS18595 PF11798 IMS family HHH motif FI878_RS18595 PF00817 impB/mucB/samB family FI878_RS18610 PF04055 Radical SAM superfamily FI878_RS18610 PF08497 Radical SAM N-terminal FI878_RS18610 PF11842 Domain of unknown function (DUF3362) FI878_RS18630 PF03358 NADPH-dependent FMN reductase FI878_RS18640 PF00291 Pyridoxal-phosphate dependent enzyme FI878_RS18700 PF01327 Polypeptide deformylase FI878_RS18710 PF02481 DNA recombination-mediator protein A FI878_RS18710 PF17782 DprA winged helix domain FI878_RS18715 PF01300 Telomere recombination FI878_RS18720 PF00892 EamA-like transporter family FI878_RS18725 PF00440 Bacterial regulatory proteins, tetR family FI878_RS18730 PF07690 Major Facilitator Superfamily FI878_RS18740 PF00255 Glutathione peroxidase FI878_RS18750 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FI878_RS18755 PF02874 ATP synthase alpha/beta family, beta-barrel domain FI878_RS18755 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FI878_RS18760 PF00231 ATP synthase FI878_RS18765 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FI878_RS18765 PF02874 ATP synthase alpha/beta family, beta-barrel domain FI878_RS18765 PF00306 ATP synthase alpha/beta chain, C terminal domain FI878_RS18770 PF00213 ATP synthase delta (OSCP) subunit FI878_RS18775 PF00430 ATP synthase B/B' CF(0) FI878_RS18780 PF00137 ATP synthase subunit C FI878_RS18785 PF00119 ATP synthase A chain FI878_RS18805 PF00005 ABC transporter FI878_RS18810 PF00950 ABC 3 transport family FI878_RS18815 PF01810 LysE type translocator FI878_RS18820 PF04261 Dyp-type peroxidase family FI878_RS18825 PF03949 Malic enzyme, NAD binding domain FI878_RS18825 PF00390 Malic enzyme, N-terminal domain FI878_RS18830 PF03485 Arginyl tRNA synthetase N terminal domain FI878_RS18830 PF00750 tRNA synthetases class I (R) FI878_RS18830 PF05746 DALR anticodon binding domain FI878_RS18850 PF05726 Pirin C-terminal cupin domain FI878_RS18850 PF02678 Pirin FI878_RS18860 PF03551 Transcriptional regulator PadR-like family FI878_RS18865 PF01909 Nucleotidyltransferase domain FI878_RS18865 PF13427 Domain of unknown function (DUF4111) FI878_RS18870 PF02540 NAD synthase FI878_RS18870 PF00117 Glutamine amidotransferase class-I FI878_RS18870 PF00958 GMP synthase C terminal domain FI878_RS18875 PF04286 Protein of unknown function (DUF445) FI878_RS18880 PF07681 DoxX FI878_RS18885 PF09335 SNARE associated Golgi protein FI878_RS18900 PF13614 AAA domain FI878_RS18910 PF01722 BolA-like protein FI878_RS18925 PF01648 4'-phosphopantetheinyl transferase superfamily FI878_RS18930 PF12697 Alpha/beta hydrolase family FI878_RS18935 PF13737 Transposase DDE domain FI878_RS18945 PF00378 Enoyl-CoA hydratase/isomerase FI878_RS18950 PF00378 Enoyl-CoA hydratase/isomerase FI878_RS18955 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FI878_RS18955 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FI878_RS18955 PF02770 Acyl-CoA dehydrogenase, middle domain FI878_RS18960 PF13193 AMP-binding enzyme C-terminal domain FI878_RS18960 PF00501 AMP-binding enzyme FI878_RS18965 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FI878_RS18965 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FI878_RS18970 PF00171 Aldehyde dehydrogenase family FI878_RS18980 PF00324 Amino acid permease FI878_RS18985 PF01042 Endoribonuclease L-PSP FI878_RS18990 PF00842 Alanine racemase, C-terminal domain FI878_RS18990 PF01168 Alanine racemase, N-terminal domain FI878_RS18995 PF01266 FAD dependent oxidoreductase FI878_RS19000 PF01037 Lrp/AsnC ligand binding domain FI878_RS19010 PF00593 TonB dependent receptor FI878_RS19010 PF07715 TonB-dependent Receptor Plug Domain FI878_RS19025 PF00849 RNA pseudouridylate synthase FI878_RS19055 PF00694 Aconitase C-terminal domain FI878_RS19055 PF00330 Aconitase family (aconitate hydratase) FI878_RS19060 PF00285 Citrate synthase, C-terminal domain FI878_RS19070 PF00392 Bacterial regulatory proteins, gntR family FI878_RS19070 PF07729 FCD domain FI878_RS19080 PF00155 Aminotransferase class I and II FI878_RS19085 PF09330 D-lactate dehydrogenase, membrane binding FI878_RS19085 PF01565 FAD binding domain FI878_RS19090 PF01070 FMN-dependent dehydrogenase FI878_RS19095 PF07729 FCD domain FI878_RS19095 PF00392 Bacterial regulatory proteins, gntR family FI878_RS19100 PF02652 L-lactate permease FI878_RS19105 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FI878_RS19105 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FI878_RS19105 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FI878_RS19105 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FI878_RS19115 PF16363 GDP-mannose 4,6 dehydratase FI878_RS19120 PF00342 Phosphoglucose isomerase FI878_RS19125 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FI878_RS19125 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FI878_RS19125 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FI878_RS19130 PF00483 Nucleotidyl transferase FI878_RS19135 PF02397 Bacterial sugar transferase FI878_RS19140 PF00535 Glycosyl transferase family 2 FI878_RS19165 PF02350 UDP-N-acetylglucosamine 2-epimerase FI878_RS19170 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FI878_RS19170 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FI878_RS19170 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FI878_RS19175 PF18412 Outer-membrane lipoprotein Wza C-terminal domain FI878_RS19175 PF10531 SLBB domain FI878_RS19175 PF02563 Polysaccharide biosynthesis/export protein FI878_RS19180 PF01451 Low molecular weight phosphotyrosine protein phosphatase FI878_RS19185 PF13614 AAA domain FI878_RS19185 PF13807 G-rich domain on putative tyrosine kinase FI878_RS19185 PF02706 Chain length determinant protein FI878_RS19190 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FI878_RS19190 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FI878_RS19195 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FI878_RS19195 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FI878_RS19200 PF03023 Lipid II flippase MurJ FI878_RS19205 PF01510 N-acetylmuramoyl-L-alanine amidase FI878_RS19210 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FI878_RS19210 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FI878_RS19225 PF01138 3' exoribonuclease family, domain 1 FI878_RS19225 PF03725 3' exoribonuclease family, domain 2 FI878_RS19230 PF00487 Fatty acid desaturase FI878_RS19235 PF00175 Oxidoreductase NAD-binding domain FI878_RS19240 PF00440 Bacterial regulatory proteins, tetR family FI878_RS19245 PF00440 Bacterial regulatory proteins, tetR family FI878_RS19245 PF08360 QacR-like protein, C-terminal region FI878_RS19250 PF01323 DSBA-like thioredoxin domain FI878_RS19260 PF13419 Haloacid dehalogenase-like hydrolase FI878_RS19265 PF00106 short chain dehydrogenase FI878_RS19280 PF00696 Amino acid kinase family FI878_RS19280 PF00583 Acetyltransferase (GNAT) family FI878_RS19285 PF09084 NMT1/THI5 like FI878_RS19290 PF09084 NMT1/THI5 like FI878_RS19295 PF00296 Luciferase-like monooxygenase FI878_RS19300 PF00528 Binding-protein-dependent transport system inner membrane component FI878_RS19305 PF00005 ABC transporter FI878_RS19310 PF00440 Bacterial regulatory proteins, tetR family FI878_RS19310 PF08362 YcdC-like protein, C-terminal region FI878_RS19315 PF01048 Phosphorylase superfamily FI878_RS19325 PF01687 Riboflavin kinase FI878_RS19325 PF06574 FAD synthetase FI878_RS19330 PF00133 tRNA synthetases class I (I, L, M and V) FI878_RS19330 PF08264 Anticodon-binding domain of tRNA FI878_RS19330 PF06827 Zinc finger found in FPG and IleRS FI878_RS19335 PF01252 Signal peptidase (SPase) II FI878_RS19340 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FI878_RS19380 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FI878_RS19385 PF07859 alpha/beta hydrolase fold FI878_RS19410 PF01025 GrpE FI878_RS19415 PF00012 Hsp70 protein FI878_RS19435 PF13406 Transglycosylase SLT domain FI878_RS19440 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain FI878_RS19440 PF02222 ATP-grasp domain FI878_RS19445 PF00731 AIR carboxylase FI878_RS19455 PF02875 Mur ligase family, glutamate ligase domain FI878_RS19455 PF08245 Mur ligase middle domain FI878_RS19455 PF01225 Mur ligase family, catalytic domain FI878_RS19465 PF01569 PAP2 superfamily FI878_RS19470 PF03741 Integral membrane protein TerC family FI878_RS19480 PF03738 Glutathionylspermidine synthase preATP-grasp FI878_RS19485 PF00355 Rieske [2Fe-2S] domain FI878_RS19490 PF01979 Amidohydrolase family FI878_RS19495 PF00156 Phosphoribosyl transferase domain FI878_RS19505 PF13098 Thioredoxin-like domain FI878_RS19505 PF10411 Disulfide bond isomerase protein N-terminus FI878_RS19510 PF01545 Cation efflux family FI878_RS19510 PF16916 Dimerisation domain of Zinc Transporter FI878_RS19515 PF02583 Metal-sensitive transcriptional repressor FI878_RS19520 PF10396 GTP-binding protein TrmE N-terminus FI878_RS19520 PF12631 MnmE helical domain FI878_RS19520 PF01926 50S ribosome-binding GTPase FI878_RS19525 PF14849 YidC periplasmic domain FI878_RS19525 PF02096 60Kd inner membrane protein FI878_RS19530 PF01809 Putative membrane protein insertion efficiency factor FI878_RS19535 PF00825 Ribonuclease P FI878_RS19540 PF00468 Ribosomal protein L34 FI878_RS19555 PF01389 OmpA-like transmembrane domain FI878_RS19555 PF00691 OmpA family FI878_RS19585 PF02321 Outer membrane efflux protein FI878_RS19590 PF00664 ABC transporter transmembrane region FI878_RS19590 PF00005 ABC transporter FI878_RS19610 PF13737 Transposase DDE domain FI878_RS19635 PF13356 Arm DNA-binding domain FI878_RS19635 PF00589 Phage integrase family FI878_RS19640 PF04151 Bacterial pre-peptidase C-terminal domain FI878_RS19650 PF00107 Zinc-binding dehydrogenase FI878_RS19650 PF16884 N-terminal domain of oxidoreductase FI878_RS19655 PF00440 Bacterial regulatory proteins, tetR family FI878_RS19655 PF16925 Tetracyclin repressor-like, C-terminal domain FI878_RS19665 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FI878_RS19675 PF00465 Iron-containing alcohol dehydrogenase FI878_RS19690 PF00756 Putative esterase FI878_RS19695 PF08240 Alcohol dehydrogenase GroES-like domain FI878_RS19695 PF00107 Zinc-binding dehydrogenase FI878_RS19700 PF02583 Metal-sensitive transcriptional repressor FI878_RS19705 PF16197 Ketoacyl-synthetase C-terminal extension FI878_RS19705 PF08659 KR domain FI878_RS19705 PF02801 Beta-ketoacyl synthase, C-terminal domain FI878_RS19705 PF08240 Alcohol dehydrogenase GroES-like domain FI878_RS19705 PF00550 Phosphopantetheine attachment site FI878_RS19705 PF14765 Polyketide synthase dehydratase FI878_RS19705 PF00109 Beta-ketoacyl synthase, N-terminal domain FI878_RS19705 PF00698 Acyl transferase domain FI878_RS19710 PF00107 Zinc-binding dehydrogenase FI878_RS19710 PF08240 Alcohol dehydrogenase GroES-like domain FI878_RS19715 PF03466 LysR substrate binding domain FI878_RS19715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FI878_RS19720 PF00106 short chain dehydrogenase FI878_RS19725 PF08240 Alcohol dehydrogenase GroES-like domain FI878_RS19725 PF00107 Zinc-binding dehydrogenase FI878_RS19750 PF01638 HxlR-like helix-turn-helix FI878_RS19755 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FI878_RS19760 PF05973 Phage derived protein Gp49-like (DUF891) FI878_RS19795 PF05973 Phage derived protein Gp49-like (DUF891) FI878_RS19840 PF13737 Transposase DDE domain FI878_RS19910 PF02195 ParB-like nuclease domain FI878_RS19910 PF17762 HTH domain found in ParB protein FI878_RS19915 PF13614 AAA domain