locus-tag	class	description
ABD1_RS00010	COG0592	DNA-directed DNA polymerase activity
ABD1_RS00020	COG0187	DNA topoisomerase II activity
ABD1_RS00030	COG0586	Pfam SNARE associated Golgi protein
ABD1_RS00035	COG0488	(ABC) transporter
ABD1_RS00060	COG0596	Alpha beta hydrolase
ABD1_RS00065	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
ABD1_RS00070	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
ABD1_RS00110	COG1047	Peptidyl-prolyl cis-trans
ABD1_RS00120	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
ABD1_RS00125	COG0196	riboflavin kinase activity
ABD1_RS00135	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
ABD1_RS00140	COG1309	transcriptional regulator
ABD1_RS00145	COG1116	anion transmembrane transporter activity
ABD1_RS00150	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ABD1_RS00155	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ABD1_RS00160	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ABD1_RS00165	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ABD1_RS00185	COG1028	Short-chain dehydrogenase reductase Sdr
ABD1_RS00190	COG0546	phosphoglycolate phosphatase activity
ABD1_RS00245	COG3023	N-Acetylmuramoyl-L-alanine amidase
ABD1_RS00250	COG0728	peptidoglycan biosynthetic process
ABD1_RS00275	COG1596	polysaccharide export
ABD1_RS00280	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
ABD1_RS00335	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
ABD1_RS00340	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
ABD1_RS00345	COG1210	Utp--glucose-1-phosphate uridylyltransferase
ABD1_RS00360	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
ABD1_RS00365	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
ABD1_RS00375	COG2186	Transcriptional regulator
ABD1_RS00385	COG0277	FAD linked oxidase domain protein
ABD1_RS00390	COG1448	Aminotransferase
ABD1_RS00395	COG1802	Transcriptional regulator
ABD1_RS00410	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
ABD1_RS00475	COG0564	pseudouridine synthase activity
ABD1_RS00515	COG0251	oxidation-reduction process
ABD1_RS00520	COG1113	amino acid transport
ABD1_RS00525	COG1113	amino acid transport
ABD1_RS00545	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
ABD1_RS00550	COG1960	acyl-CoA dehydrogenase activity
ABD1_RS00555	COG1024	Enoyl-CoA hydratase
ABD1_RS00560	COG1024	Enoyl-CoA hydratase
ABD1_RS00565	COG0477	Major facilitator Superfamily
ABD1_RS00570	COG0019	diaminopimelate decarboxylase activity
ABD1_RS00575	COG0318	PFAM AMP-dependent synthetase and ligase
ABD1_RS00585	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
ABD1_RS00590	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
ABD1_RS00595	COG1846	Transcriptional regulator
ABD1_RS00600	COG3916	Acyl-homoserine-lactone synthase
ABD1_RS00610	COG2197	response regulator
ABD1_RS00620	COG1960	acyl-CoA dehydrogenase activity
ABD1_RS00625	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
ABD1_RS00625	COG3321	synthase
ABD1_RS00625	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
ABD1_RS00625	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
ABD1_RS00665	COG0271	Belongs to the BolA IbaG family
ABD1_RS00675	COG1192	Involved in chromosome partitioning
ABD1_RS00690	COG0586	Pfam SNARE associated Golgi protein
ABD1_RS00695	COG2259	Doxx family
ABD1_RS00700	COG4399	Belongs to the UPF0754 family
ABD1_RS00705	COG0519	Catalyzes the synthesis of GMP from XMP
ABD1_RS00705	COG0518	GMP synthase (glutamine-hydrolyzing) activity
ABD1_RS00750	COG0281	malic enzyme
ABD1_RS00755	COG2837	iron assimilation
ABD1_RS00760	COG1280	lysine exporter protein (LysE YggA)
ABD1_RS00765	COG1108	ABC-type Mn2 Zn2 transport systems permease components
ABD1_RS00770	COG1121	(ABC) transporter
ABD1_RS00835	COG0386	Belongs to the glutathione peroxidase family
ABD1_RS00850	COG1309	transcriptional regulator
ABD1_RS00855	COG0697	spore germination
ABD1_RS00865	COG0758	DNA mediated transformation
ABD1_RS00900	COG1309	transcriptional regulator
ABD1_RS00935	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
ABD1_RS00945	COG0655	NAD(P)H dehydrogenase (quinone) activity
ABD1_RS00980	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
ABD1_RS00990	COG0477	Major facilitator Superfamily
ABD1_RS01000	COG1253	flavin adenine dinucleotide binding
ABD1_RS01005	COG3012	SEC-C Motif Domain Protein
ABD1_RS01010	COG2860	membrane
ABD1_RS01015	COG0477	Major facilitator Superfamily
ABD1_RS01025	COG0318	PFAM AMP-dependent synthetase and ligase
ABD1_RS01040	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
ABD1_RS01055	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ABD1_RS01065	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ABD1_RS01070	COG0606	chelatase, subunit chli
ABD1_RS01080	COG0347	Belongs to the P(II) protein family
ABD1_RS01085	COG0004	ammonium transporteR
ABD1_RS01095	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
ABD1_RS01095	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
ABD1_RS01135	COG0795	lipopolysaccharide-transporting ATPase activity
ABD1_RS01140	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
ABD1_RS01145	COG0793	Belongs to the peptidase S41A family
ABD1_RS01160	COG2197	response regulator
ABD1_RS01170	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
ABD1_RS01180	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
ABD1_RS01185	COG4974	Belongs to the 'phage' integrase family
ABD1_RS01210	COG0772	Belongs to the SEDS family
ABD1_RS01215	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
ABD1_RS01220	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
ABD1_RS01225	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
ABD1_RS01250	COG0697	spore germination
ABD1_RS01255	COG1538	Outer membrane efflux protein
ABD1_RS01275	COG3275	phosphorelay sensor kinase activity
ABD1_RS01285	COG0181	hydroxymethylbilane synthase activity
ABD1_RS01330	COG1716	ATPase activity
ABD1_RS01335	COG0546	phosphoglycolate phosphatase activity
ABD1_RS01435	COG2056	Na+-H+ antiporter family
ABD1_RS01450	COG0326	Molecular chaperone. Has ATPase activity
ABD1_RS01465	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
ABD1_RS01530	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
ABD1_RS01535	COG2169	Transcriptional regulator
ABD1_RS01535	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
ABD1_RS01565	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
ABD1_RS01575	COG0497	DNA recombination
ABD1_RS01590	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ABD1_RS01600	COG0237	dephospho-CoA kinase activity
ABD1_RS01650	COG0195	Participates in both transcription termination and antitermination
ABD1_RS01665	COG1320	monovalent cation:proton antiporter activity
ABD1_RS01670	COG2212	antiporter activity
ABD1_RS01675	COG1863	multisubunit Na H antiporter MnhE subunit
ABD1_RS01680	COG0651	ATP synthesis coupled electron transport
ABD1_RS01685	COG1006	Multisubunit Na H antiporter MnhC subunit
ABD1_RS01690	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
ABD1_RS01690	COG2111	Na H antiporter
ABD1_RS01705	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
ABD1_RS01710	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ABD1_RS01725	COG2226	methyltransferase
ABD1_RS01745	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
ABD1_RS01750	COG1074	ATP-dependent DNA helicase activity
ABD1_RS01755	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
ABD1_RS01760	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
ABD1_RS01775	COG0598	Magnesium transport protein CorA
ABD1_RS01780	COG0789	Transcriptional regulator
ABD1_RS01785	COG0484	heat shock protein binding
ABD1_RS01800	COG0475	glutathione-regulated potassium exporter activity
ABD1_RS01800	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
ABD1_RS01805	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
ABD1_RS01825	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ABD1_RS01835	COG4535	Mg2 and Co2 transporter CorC
ABD1_RS01840	COG0425	Belongs to the sulfur carrier protein TusA family
ABD1_RS01850	COG0644	oxidoreductase
ABD1_RS01850	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
ABD1_RS01860	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
ABD1_RS01875	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ABD1_RS01880	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
ABD1_RS01890	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
ABD1_RS01890	COG0493	'glutamate synthase
ABD1_RS01915	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
ABD1_RS01930	COG0534	Mate efflux family protein
ABD1_RS01940	COG0635	Involved in the biosynthesis of porphyrin-containing compound
ABD1_RS01945	COG1028	Short-chain dehydrogenase reductase Sdr
ABD1_RS01950	COG0583	DNA-binding transcription factor activity
ABD1_RS01965	COG0318	PFAM AMP-dependent synthetase and ligase
ABD1_RS01970	COG1530	ribonuclease E activity
ABD1_RS01980	COG0546	phosphoglycolate phosphatase activity
ABD1_RS01985	COG2378	regulation of single-species biofilm formation
ABD1_RS01990	COG0625	glutathione transferase activity
ABD1_RS02000	COG0583	DNA-binding transcription factor activity
ABD1_RS02055	COG0473	3-isopropylmalate dehydrogenase activity
ABD1_RS02110	COG1301	dicarboxylic acid transport
ABD1_RS02120	COG1560	Kdo2-lipid A biosynthetic process
ABD1_RS02125	COG1280	lysine exporter protein (LysE YggA)
ABD1_RS02130	COG0488	(ABC) transporter
ABD1_RS02135	COG2900	Belongs to the SlyX family
ABD1_RS02145	COG1733	regulation of RNA biosynthetic process
ABD1_RS02170	COG0210	DNA helicase
ABD1_RS02175	COG0724	RNA recognition motif
ABD1_RS02195	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
ABD1_RS02195	COG4651	solute:proton antiporter activity
ABD1_RS02220	COG0788	formyltetrahydrofolate deformylase activity
ABD1_RS02325	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ABD1_RS02325	COG2813	Specifically methylates the guanine in position
ABD1_RS02335	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
ABD1_RS02345	COG4774	siderophore transport
ABD1_RS02355	COG0740	serine-type endopeptidase activity
ABD1_RS02375	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
ABD1_RS02375	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
ABD1_RS02380	COG0280	phosphate acetyltransferase
ABD1_RS02380	COG0857	belongs to the CobB CobQ family
ABD1_RS02385	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
ABD1_RS02395	COG0800	Aldolase
ABD1_RS02405	COG3265	gluconokinase activity
ABD1_RS02410	COG1012	belongs to the aldehyde dehydrogenase family
ABD1_RS02420	COG2267	carboxylic ester hydrolase activity
ABD1_RS02435	COG0793	Belongs to the peptidase S41A family
ABD1_RS02470	COG1426	Protein conserved in bacteria
ABD1_RS02515	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
ABD1_RS02525	COG0318	PFAM AMP-dependent synthetase and ligase
ABD1_RS02530	COG1216	Glycosyl transferase, family 2
ABD1_RS02540	COG2986	histidine ammonia-lyase
ABD1_RS02580	COG1028	Short-chain dehydrogenase reductase Sdr
ABD1_RS02585	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
ABD1_RS02605	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
ABD1_RS02615	COG1162	GTPase activity
ABD1_RS02620	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
ABD1_RS02635	COG1538	Outer membrane efflux protein
ABD1_RS02640	COG0577	efflux transmembrane transporter activity
ABD1_RS02640	COG1136	(ABC) transporter
ABD1_RS02645	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABD1_RS02670	COG0028	Belongs to the TPP enzyme family
ABD1_RS02675	COG0440	acetolactate synthase activity
ABD1_RS02705	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
ABD1_RS02720	COG0084	hydrolase, TatD family'
ABD1_RS02730	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
ABD1_RS02735	COG0583	DNA-binding transcription factor activity
ABD1_RS02745	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
ABD1_RS02780	COG3013	Belongs to the UPF0304 family
ABD1_RS02815	COG1522	sequence-specific DNA binding
ABD1_RS02825	COG1113	amino acid transport
ABD1_RS02830	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
ABD1_RS02835	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
ABD1_RS02845	COG1012	belongs to the aldehyde dehydrogenase family
ABD1_RS02855	COG0477	Major facilitator Superfamily
ABD1_RS02880	COG0583	DNA-binding transcription factor activity
ABD1_RS02940	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
ABD1_RS02950	COG0732	type I restriction modification DNA specificity domain
ABD1_RS02965	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
ABD1_RS02970	COG2814	Major facilitator Superfamily
ABD1_RS02980	COG0697	spore germination
ABD1_RS03010	COG3622	Belongs to the hyi family
ABD1_RS03015	COG2084	Dehydrogenase
ABD1_RS03020	COG1024	Enoyl-CoA hydratase
ABD1_RS03025	COG0784	Response regulator, receiver
ABD1_RS03025	COG5002	protein histidine kinase activity
ABD1_RS03025	COG2205	protein histidine kinase activity
ABD1_RS03045	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
ABD1_RS03055	COG3956	TIGRFAM MazG family protein
ABD1_RS03060	COG1555	photosystem II stabilization
ABD1_RS03065	COG0617	tRNA 3'-terminal CCA addition
ABD1_RS03070	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
ABD1_RS03090	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
ABD1_RS03095	COG3028	Belongs to the UPF0307 family
ABD1_RS03100	COG0318	PFAM AMP-dependent synthetase and ligase
ABD1_RS03115	COG0625	glutathione transferase activity
ABD1_RS03120	COG1238	metal cluster binding
ABD1_RS03160	COG0072	phenylalanine-tRNA ligase activity
ABD1_RS03185	COG0248	Ppx GppA phosphatase
ABD1_RS03195	COG0037	tRNA processing
ABD1_RS03235	COG1764	response to oxidative stress
ABD1_RS03240	COG1846	Transcriptional regulator
ABD1_RS03250	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
ABD1_RS03310	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
ABD1_RS03315	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
ABD1_RS03320	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
ABD1_RS03380	COG1214	PFAM Peptidase M22, glycoprotease
ABD1_RS03395	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
ABD1_RS03405	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
ABD1_RS03410	COG0561	phosphatase activity
ABD1_RS03420	COG2132	Multicopper oxidase
ABD1_RS03425	COG3667	copper resistance
ABD1_RS03440	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
ABD1_RS03445	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
ABD1_RS03450	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
ABD1_RS03480	COG1063	alcohol dehydrogenase
ABD1_RS03485	COG0583	DNA-binding transcription factor activity
ABD1_RS03490	COG1960	acyl-CoA dehydrogenase activity
ABD1_RS03495	COG2814	Major facilitator Superfamily
ABD1_RS03500	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ABD1_RS03505	COG1309	transcriptional regulator
ABD1_RS03520	COG1053	succinate dehydrogenase
ABD1_RS03525	COG0583	DNA-binding transcription factor activity
ABD1_RS03540	COG0583	DNA-binding transcription factor activity
ABD1_RS03575	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ABD1_RS03625	COG0384	phenazine biosynthesis protein PhzF
ABD1_RS03635	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
ABD1_RS03655	COG0745	RESPONSE REGULATOR receiver
ABD1_RS03695	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
ABD1_RS03725	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
ABD1_RS03730	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ABD1_RS03755	COG0583	DNA-binding transcription factor activity
ABD1_RS03775	COG0668	transmembrane transport
ABD1_RS03785	COG2081	HI0933 family
ABD1_RS03790	COG2515	1-aminocyclopropane-1-carboxylate deaminase
ABD1_RS03820	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ABD1_RS03820	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ABD1_RS03830	COG0489	protein tyrosine kinase activity
ABD1_RS03885	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
ABD1_RS03895	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
ABD1_RS03910	COG0730	response to heat
ABD1_RS03920	COG1196	nuclear chromosome segregation
ABD1_RS03940	COG2223	nitrite transmembrane transporter activity
ABD1_RS03945	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
ABD1_RS03950	COG1877	trehalose-phosphatase activity
ABD1_RS03955	COG2226	methyltransferase
ABD1_RS03955	COG0596	Alpha beta hydrolase
ABD1_RS03955	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ABD1_RS03970	COG4106	trans-aconitate 2-methyltransferase activity
ABD1_RS03985	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
ABD1_RS03990	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
ABD1_RS03995	COG0009	L-threonylcarbamoyladenylate synthase
ABD1_RS04000	COG3101	peptidyl-lysine hydroxylation
ABD1_RS04005	COG1399	metal-binding, possibly nucleic acid-binding protein
ABD1_RS04035	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
ABD1_RS04035	COG0351	phosphomethylpyrimidine kinase
ABD1_RS04035	COG0352	thiamine-phosphate diphosphorylase activity
ABD1_RS04045	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
ABD1_RS04075	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
ABD1_RS04085	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
ABD1_RS04100	COG0358	DNA primase activity
ABD1_RS04110	COG0564	pseudouridine synthase activity
ABD1_RS04135	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
ABD1_RS04150	COG0583	DNA-binding transcription factor activity
ABD1_RS04155	COG0473	3-isopropylmalate dehydrogenase activity
ABD1_RS04165	COG0657	acetylesterase activity
ABD1_RS04175	COG1012	belongs to the aldehyde dehydrogenase family
ABD1_RS04195	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
ABD1_RS04195	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
ABD1_RS04210	COG1981	membrane
ABD1_RS04255	COG0456	acetyltransferase
ABD1_RS04265	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
ABD1_RS04270	COG0492	ferredoxin-NADP+ reductase activity
ABD1_RS04275	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
ABD1_RS04275	COG1674	ftsk spoiiie
ABD1_RS04280	COG1280	lysine exporter protein (LysE YggA)
ABD1_RS04295	COG2894	cell division
ABD1_RS04310	COG0204	Acyl-transferase
ABD1_RS04315	COG2885	chlorophyll binding
ABD1_RS04320	COG0210	DNA helicase
ABD1_RS04330	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
ABD1_RS04345	COG0121	glutamine amidotransferase
ABD1_RS04365	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
ABD1_RS04370	COG0735	belongs to the Fur family
ABD1_RS04395	COG0420	3'-5' exonuclease activity
ABD1_RS04415	COG1090	epimerase
ABD1_RS04430	COG2050	protein possibly involved in aromatic compounds catabolism
ABD1_RS04440	COG2814	Major facilitator Superfamily
ABD1_RS04445	COG0405	Gamma-glutamyltransferase
ABD1_RS04450	COG0582	viral genome integration into host DNA
ABD1_RS04505	COG0477	Major facilitator Superfamily
ABD1_RS04510	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ABD1_RS04535	COG0531	amino acid
ABD1_RS04540	COG2040	homocysteine
ABD1_RS04565	COG1309	transcriptional regulator
ABD1_RS04570	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
ABD1_RS04575	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
ABD1_RS04585	COG1607	acyl-coa hydrolase
ABD1_RS04595	COG0523	cobalamin synthesis protein
ABD1_RS04605	COG4681	YaeQ
ABD1_RS04615	COG0726	polysaccharide deacetylase
ABD1_RS04615	COG1649	PFAM Uncharacterised BCR, COG1649
ABD1_RS04620	COG1215	transferase activity, transferring glycosyl groups
ABD1_RS04630	COG1024	Enoyl-CoA hydratase
ABD1_RS04645	COG1414	Transcriptional regulator
ABD1_RS04665	COG1028	Short-chain dehydrogenase reductase Sdr
ABD1_RS04680	COG2271	Major facilitator Superfamily
ABD1_RS04690	COG2267	carboxylic ester hydrolase activity
ABD1_RS04695	COG1028	Short-chain dehydrogenase reductase Sdr
ABD1_RS04705	COG1012	belongs to the aldehyde dehydrogenase family
ABD1_RS04710	COG0028	Belongs to the TPP enzyme family
ABD1_RS04720	COG0477	Major facilitator Superfamily
ABD1_RS04725	COG0242	peptide deformylase activity
ABD1_RS04730	COG2066	Belongs to the glutaminase family
ABD1_RS04735	COG2207	Transcriptional regulator
ABD1_RS04740	COG2223	nitrite transmembrane transporter activity
ABD1_RS04755	COG0583	DNA-binding transcription factor activity
ABD1_RS04760	COG1028	Short-chain dehydrogenase reductase Sdr
ABD1_RS04765	COG2271	Major facilitator Superfamily
ABD1_RS04770	COG3959	Transketolase, thiamine diphosphate binding domain
ABD1_RS04775	COG3958	Transketolase
ABD1_RS04785	COG0306	phosphate transporter
ABD1_RS04805	COG1262	PFAM Formylglycine-generating sulfatase enzyme
ABD1_RS04850	COG4181	ATPase activity
ABD1_RS04855	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
ABD1_RS04880	COG0583	DNA-binding transcription factor activity
ABD1_RS04890	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ABD1_RS04895	COG1773	rubredoxin
ABD1_RS04940	COG2851	Citrate transporter
ABD1_RS04945	COG1253	flavin adenine dinucleotide binding
ABD1_RS04985	COG0804	urea catabolic process
ABD1_RS04995	COG0830	nickel cation binding
ABD1_RS05010	COG0742	ribosomal rna small subunit methyltransferase
ABD1_RS05015	COG0768	penicillin binding
ABD1_RS05035	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
ABD1_RS05040	COG2878	Part of a membrane complex involved in electron transport
ABD1_RS05045	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
ABD1_RS05055	COG3384	dioxygenase
ABD1_RS05085	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
ABD1_RS05240	COG5410	chromosome segregation
ABD1_RS05425	COG2194	sulfuric ester hydrolase activity
ABD1_RS05450	COG0006	proline dipeptidase activity
ABD1_RS05455	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ABD1_RS05460	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ABD1_RS05480	COG1279	arginine transmembrane transporter activity
ABD1_RS05485	COG0583	DNA-binding transcription factor activity
ABD1_RS05525	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
ABD1_RS05530	COG1388	LysM domain
ABD1_RS05530	COG0741	lytic transglycosylase activity
ABD1_RS05530	COG1388	LysM domain
ABD1_RS05530	COG0741	lytic transglycosylase activity
ABD1_RS05540	COG4174	ABC transporter (Permease)
ABD1_RS05545	COG4239	(ABC) transporter, permease
ABD1_RS05550	COG4172	Belongs to the ABC transporter superfamily
ABD1_RS05570	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
ABD1_RS05580	COG2203	Gaf domain
ABD1_RS05580	COG3706	GGDEF domain
ABD1_RS05580	COG4251	negative regulation of phosphorylation
ABD1_RS05580	COG5001	Diguanylate cyclase
ABD1_RS05590	COG0446	pyridine nucleotide-disulphide oxidoreductase
ABD1_RS05590	COG1902	pentaerythritol trinitrate reductase activity
ABD1_RS05645	COG1113	amino acid transport
ABD1_RS05655	COG0531	amino acid
ABD1_RS05675	COG1012	belongs to the aldehyde dehydrogenase family
ABD1_RS05695	COG1113	amino acid transport
ABD1_RS05705	COG1741	Belongs to the pirin family
ABD1_RS05720	COG2072	flavoprotein involved in K transport
ABD1_RS05730	COG2252	PERMEase
ABD1_RS05735	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
ABD1_RS05740	COG3038	cytochrome b561
ABD1_RS05750	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
ABD1_RS05760	COG0527	aspartate kinase activity
ABD1_RS05920	COG5410	chromosome segregation
ABD1_RS06035	COG1598	PFAM Uncharacterised protein family UPF0150
ABD1_RS06105	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
ABD1_RS06110	COG0582	viral genome integration into host DNA
ABD1_RS06120	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
ABD1_RS06130	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
ABD1_RS06145	COG0667	Aldo Keto reductase
ABD1_RS06170	COG0542	response to heat
ABD1_RS06205	COG2885	chlorophyll binding
ABD1_RS06215	COG0625	glutathione transferase activity
ABD1_RS06220	COG0220	tRNA (guanine-N7-)-methyltransferase activity
ABD1_RS06240	COG3634	alkyl hydroperoxide reductase activity
ABD1_RS06250	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
ABD1_RS06260	COG0450	alkyl hydroperoxide reductase
ABD1_RS06265	COG1643	Atp-dependent helicase
ABD1_RS06280	COG2814	Major facilitator Superfamily
ABD1_RS06285	COG3135	benzoate transporter
ABD1_RS06290	COG1028	Short-chain dehydrogenase reductase Sdr
ABD1_RS06295	COG0633	Ferredoxin
ABD1_RS06295	COG0543	2 iron, 2 sulfur cluster binding
ABD1_RS06300	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
ABD1_RS06305	COG4638	Rieske (2fe-2S)
ABD1_RS06310	COG0583	DNA-binding transcription factor activity
ABD1_RS06360	COG1570	exodeoxyribonuclease VII activity
ABD1_RS06390	COG1280	lysine exporter protein (LysE YggA)
ABD1_RS06395	COG1278	Cold shock
ABD1_RS06425	COG2814	Major facilitator Superfamily
ABD1_RS06470	COG3727	T/G mismatch-specific endonuclease activity
ABD1_RS06490	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
ABD1_RS06500	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
ABD1_RS06505	COG1137	ATPase activity
ABD1_RS06510	COG1538	Outer membrane efflux protein
ABD1_RS06540	COG4122	O-methyltransferase activity
ABD1_RS06550	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
ABD1_RS06565	COG1522	sequence-specific DNA binding
ABD1_RS06570	COG5006	permease, DMT superfamily
ABD1_RS06590	COG2814	Major facilitator Superfamily
ABD1_RS06610	COG1250	3-hydroxyacyl-CoA dehydrogenase
ABD1_RS06635	COG0583	DNA-binding transcription factor activity
ABD1_RS06640	COG1914	H( )-stimulated, divalent metal cation uptake system
ABD1_RS06660	COG4770	biotin carboxylase activity
ABD1_RS06665	COG0038	chloride channel
ABD1_RS06695	COG1309	transcriptional regulator
ABD1_RS06705	COG1063	alcohol dehydrogenase
ABD1_RS06720	COG0439	Biotin carboxylase
ABD1_RS06725	COG2249	NAD(P)H dehydrogenase (quinone) activity
ABD1_RS06730	COG1733	regulation of RNA biosynthetic process
ABD1_RS06745	COG0864	Transcriptional regulator
ABD1_RS06755	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ABD1_RS06760	COG1116	anion transmembrane transporter activity
ABD1_RS06820	COG0590	tRNA wobble adenosine to inosine editing
ABD1_RS06825	COG2807	transmembrane transport
ABD1_RS06840	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
ABD1_RS06850	COG0789	Transcriptional regulator
ABD1_RS06860	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ABD1_RS06880	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ABD1_RS06905	COG1012	belongs to the aldehyde dehydrogenase family
ABD1_RS06910	COG0531	amino acid
ABD1_RS06915	COG1760	l-serine dehydratase
ABD1_RS06920	COG2030	dehydratase
ABD1_RS06920	COG1012	belongs to the aldehyde dehydrogenase family
ABD1_RS06925	COG3396	Phenylacetate-CoA oxygenase
ABD1_RS06930	COG3460	Phenylacetate-CoA oxygenase
ABD1_RS06935	COG3396	Phenylacetate-CoA oxygenase
ABD1_RS06940	COG2151	metal-sulfur cluster biosynthetic enzyme
ABD1_RS06945	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ABD1_RS06950	COG1024	Enoyl-CoA hydratase
ABD1_RS06955	COG1024	Enoyl-CoA hydratase
ABD1_RS06960	COG1250	3-hydroxyacyl-CoA dehydrogenase
ABD1_RS06965	COG0183	Belongs to the thiolase family
ABD1_RS06970	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
ABD1_RS06975	COG3327	negative regulation of DNA-templated transcription, initiation
ABD1_RS06985	COG2050	protein possibly involved in aromatic compounds catabolism
ABD1_RS07010	COG0406	alpha-ribazole phosphatase activity
ABD1_RS07040	COG0583	DNA-binding transcription factor activity
ABD1_RS07050	COG4770	biotin carboxylase activity
ABD1_RS07055	COG1024	Enoyl-CoA hydratase
ABD1_RS07060	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
ABD1_RS07065	COG1960	acyl-CoA dehydrogenase activity
ABD1_RS07070	COG1309	transcriptional regulator
ABD1_RS07075	COG0318	PFAM AMP-dependent synthetase and ligase
ABD1_RS07095	COG0583	DNA-binding transcription factor activity
ABD1_RS07150	COG1028	Short-chain dehydrogenase reductase Sdr
ABD1_RS07170	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
ABD1_RS07190	COG0784	Response regulator, receiver
ABD1_RS07190	COG2205	protein histidine kinase activity
ABD1_RS07205	COG0765	amino acid transport
ABD1_RS07210	COG0765	amino acid transport
ABD1_RS07215	COG1126	abc transporter atp-binding protein
ABD1_RS07220	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ABD1_RS07225	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ABD1_RS07235	COG1280	lysine exporter protein (LysE YggA)
ABD1_RS07240	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
ABD1_RS07245	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ABD1_RS07250	COG1045	serine acetyltransferase
ABD1_RS07260	COG1028	Short-chain dehydrogenase reductase Sdr
ABD1_RS07265	COG0583	DNA-binding transcription factor activity
ABD1_RS07270	COG0625	glutathione transferase activity
ABD1_RS07275	COG0625	glutathione transferase activity
ABD1_RS07280	COG0583	DNA-binding transcription factor activity
ABD1_RS07290	COG1346	cytolysis
ABD1_RS07310	COG2814	Major facilitator Superfamily
ABD1_RS07320	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
ABD1_RS07325	COG3052	prosthetic group binding
ABD1_RS07345	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
ABD1_RS07365	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ABD1_RS07375	COG1294	oxidase, subunit
ABD1_RS07380	COG1271	oxidase subunit
ABD1_RS07405	COG0477	Major facilitator Superfamily
ABD1_RS07415	COG4521	taurine ABC transporter
ABD1_RS07420	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
ABD1_RS07425	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ABD1_RS07430	COG2175	clavaminate synthase activity
ABD1_RS07440	COG1953	Uracil, thiamine, allantoin
ABD1_RS07460	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
ABD1_RS07475	COG0640	Transcriptional regulator
ABD1_RS07480	COG0798	PFAM Bile acid sodium symporter
ABD1_RS07485	COG0583	DNA-binding transcription factor activity
ABD1_RS07500	COG3634	alkyl hydroperoxide reductase activity
ABD1_RS07535	COG1301	dicarboxylic acid transport
ABD1_RS07540	COG0436	Aminotransferase
ABD1_RS07550	COG0386	Belongs to the glutathione peroxidase family
ABD1_RS07590	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
ABD1_RS07615	COG0012	GTP binding
ABD1_RS07620	COG2011	ABC-type metal ion transport system permease component
ABD1_RS07625	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
ABD1_RS07635	COG1464	Belongs to the NlpA lipoprotein family
ABD1_RS07665	COG0765	amino acid transport
ABD1_RS07670	COG0765	amino acid transport
ABD1_RS07675	COG1126	abc transporter atp-binding protein
ABD1_RS07685	COG1522	sequence-specific DNA binding
ABD1_RS07700	COG1309	transcriptional regulator
ABD1_RS07720	COG0583	DNA-binding transcription factor activity
ABD1_RS07730	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
ABD1_RS07740	COG0697	spore germination
ABD1_RS07775	COG3121	Chaperone
ABD1_RS07780	COG3539	Fimbrial protein
ABD1_RS07805	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
ABD1_RS07805	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
ABD1_RS07850	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
ABD1_RS07860	COG2353	YceI-like domain
ABD1_RS07870	COG3698	Phosphodiester glycosidase
ABD1_RS07890	COG0506	proline dehydrogenase activity
ABD1_RS07890	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
ABD1_RS07890	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
ABD1_RS07900	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ABD1_RS07905	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
ABD1_RS07925	COG1132	(ABC) transporter
ABD1_RS07930	COG3122	Protein conserved in bacteria
ABD1_RS07935	COG3619	membrane
ABD1_RS07945	COG0640	Transcriptional regulator
ABD1_RS07955	COG2850	peptidyl-arginine hydroxylation
ABD1_RS07960	COG0424	maF-like protein
ABD1_RS07980	COG0191	fructose-bisphosphate aldolase activity
ABD1_RS07985	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
ABD1_RS08000	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
ABD1_RS08010	COG1192	Involved in chromosome partitioning
ABD1_RS08015	COG1475	DNA binding
ABD1_RS08020	COG0811	peptide transport
ABD1_RS08030	COG1132	(ABC) transporter
ABD1_RS08035	COG1663	tetraacyldisaccharide 4'-kinase activity
ABD1_RS08055	COG0084	hydrolase, TatD family'
ABD1_RS08120	COG0776	regulation of translation
ABD1_RS08150	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
ABD1_RS08155	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
ABD1_RS08200	COG0339	signal peptide processing
ABD1_RS08210	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ABD1_RS08245	COG0702	epimerase
ABD1_RS08250	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
ABD1_RS08270	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
ABD1_RS08300	COG0316	Belongs to the HesB IscA family
ABD1_RS08305	COG0822	iron-sulfur transferase activity
ABD1_RS08330	COG0776	regulation of translation
ABD1_RS08335	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
ABD1_RS08345	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ABD1_RS08350	COG1960	acyl-CoA dehydrogenase activity
ABD1_RS08355	COG1960	acyl-CoA dehydrogenase activity
ABD1_RS08370	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
ABD1_RS08390	COG4264	IucA IucC family
ABD1_RS08395	COG4264	IucA IucC family
ABD1_RS08405	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
ABD1_RS08430	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
ABD1_RS08445	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
ABD1_RS08465	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
ABD1_RS08470	COG0730	response to heat
ABD1_RS08490	COG4773	Receptor
ABD1_RS08495	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ABD1_RS08510	COG1131	(ABC) transporter
ABD1_RS08515	COG0842	Transport permease protein
ABD1_RS08520	COG0842	Transport permease protein
ABD1_RS08545	COG0537	adenosine 5'-monophosphoramidase activity
ABD1_RS08580	COG2226	methyltransferase
ABD1_RS08605	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
ABD1_RS08640	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
ABD1_RS08650	COG0133	tryptophan synthase activity
ABD1_RS08665	COG3706	GGDEF domain
ABD1_RS08680	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
ABD1_RS08685	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
ABD1_RS08690	COG0022	dehydrogenase e1 component
ABD1_RS08695	COG0508	dehydrogenase complex catalyzes the overall conversion of
ABD1_RS08700	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ABD1_RS08710	COG1063	alcohol dehydrogenase
ABD1_RS08715	COG3781	membrane
ABD1_RS08725	COG3453	Protein conserved in bacteria
ABD1_RS08725	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ABD1_RS08735	COG0730	response to heat
ABD1_RS08750	COG3708	Transcriptional regulator
ABD1_RS08750	COG2207	Transcriptional regulator
ABD1_RS08755	COG1733	regulation of RNA biosynthetic process
ABD1_RS08760	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
ABD1_RS08770	COG2188	Transcriptional regulator
ABD1_RS08785	COG4521	taurine ABC transporter
ABD1_RS08790	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ABD1_RS08810	COG0477	Major facilitator Superfamily
ABD1_RS08820	COG1027	Aspartate ammonia-lyase
ABD1_RS08835	COG0583	DNA-binding transcription factor activity
ABD1_RS08840	COG0583	DNA-binding transcription factor activity
ABD1_RS08845	COG0183	Belongs to the thiolase family
ABD1_RS08850	COG2031	fatty acid transporter
ABD1_RS08865	COG0583	DNA-binding transcription factor activity
ABD1_RS08875	COG2610	gluconate transmembrane transporter activity
ABD1_RS08880	COG1028	Short-chain dehydrogenase reductase Sdr
ABD1_RS08885	COG2207	Transcriptional regulator
ABD1_RS08900	COG1028	Short-chain dehydrogenase reductase Sdr
ABD1_RS08910	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ABD1_RS08925	COG0543	2 iron, 2 sulfur cluster binding
ABD1_RS08925	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ABD1_RS08930	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
ABD1_RS08935	COG4638	Rieske (2fe-2S)
ABD1_RS08945	COG0725	ABC transporter, periplasmic molybdate-binding protein
ABD1_RS08950	COG4149	molybdate abc transporter
ABD1_RS08955	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
ABD1_RS08960	COG1028	Short-chain dehydrogenase reductase Sdr
ABD1_RS08965	COG3433	isochorismatase activity
ABD1_RS08965	COG1535	isochorismatase
ABD1_RS09025	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ABD1_RS09040	COG0753	catalase activity
ABD1_RS09050	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
ABD1_RS09075	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ABD1_RS09080	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABD1_RS09085	COG0745	RESPONSE REGULATOR receiver
ABD1_RS09090	COG2205	protein histidine kinase activity
ABD1_RS09100	COG2207	Transcriptional regulator
ABD1_RS09115	COG1028	Short-chain dehydrogenase reductase Sdr
ABD1_RS09120	COG1204	response to ionizing radiation
ABD1_RS09160	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
ABD1_RS09240	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
ABD1_RS09280	COG1120	ATPase activity
ABD1_RS09285	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ABD1_RS09295	COG1064	alcohol dehydrogenase
ABD1_RS09300	COG2207	Transcriptional regulator
ABD1_RS09305	COG2084	Dehydrogenase
ABD1_RS09315	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ABD1_RS09320	COG0583	DNA-binding transcription factor activity
ABD1_RS09330	COG0129	dihydroxy-acid dehydratase activity
ABD1_RS09335	COG1012	belongs to the aldehyde dehydrogenase family
ABD1_RS09350	COG1566	PFAM secretion protein HlyD family protein
ABD1_RS09365	COG0583	DNA-binding transcription factor activity
ABD1_RS09380	COG2188	Transcriptional regulator
ABD1_RS09450	COG0318	PFAM AMP-dependent synthetase and ligase
ABD1_RS09460	COG1960	acyl-CoA dehydrogenase activity
ABD1_RS09470	COG1028	Short-chain dehydrogenase reductase Sdr
ABD1_RS09475	COG1028	Short-chain dehydrogenase reductase Sdr
ABD1_RS09480	COG1028	Short-chain dehydrogenase reductase Sdr
ABD1_RS09485	COG0583	DNA-binding transcription factor activity
ABD1_RS09490	COG1309	transcriptional regulator
ABD1_RS09515	COG0789	Transcriptional regulator
ABD1_RS09530	COG0446	pyridine nucleotide-disulphide oxidoreductase
ABD1_RS09530	COG1902	pentaerythritol trinitrate reductase activity
ABD1_RS09545	COG1012	belongs to the aldehyde dehydrogenase family
ABD1_RS09565	COG2186	Transcriptional regulator
ABD1_RS09575	COG0583	DNA-binding transcription factor activity
ABD1_RS09580	COG4948	Mandelate Racemase Muconate Lactonizing
ABD1_RS09585	COG4829	muconolactone delta-isomerase
ABD1_RS09595	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
ABD1_RS09600	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
ABD1_RS09605	COG0183	Belongs to the thiolase family
ABD1_RS09610	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ABD1_RS09620	COG1012	belongs to the aldehyde dehydrogenase family
ABD1_RS09630	COG3733	amine oxidase
ABD1_RS09640	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ABD1_RS09650	COG1028	Short-chain dehydrogenase reductase Sdr
ABD1_RS09660	COG4638	Rieske (2fe-2S)
ABD1_RS09680	COG0154	amidase activity
ABD1_RS09690	COG2814	Major facilitator Superfamily
ABD1_RS09715	COG1960	acyl-CoA dehydrogenase activity
ABD1_RS09720	COG0583	DNA-binding transcription factor activity
ABD1_RS09725	COG1414	Transcriptional regulator
ABD1_RS09740	COG2391	methyltransferase activity
ABD1_RS09750	COG4993	Dehydrogenase
ABD1_RS09755	COG3659	wide pore channel activity
ABD1_RS09760	COG3420	alginic acid biosynthetic process
ABD1_RS09765	COG0710	3-dehydroquinate dehydratase activity
ABD1_RS09770	COG3485	protocatechuate 3,4-dioxygenase
ABD1_RS09775	COG3485	protocatechuate 3,4-dioxygenase
ABD1_RS09780	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
ABD1_RS09785	COG2271	Major facilitator Superfamily
ABD1_RS09790	COG0596	Alpha beta hydrolase
ABD1_RS09795	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
ABD1_RS09800	COG0183	Belongs to the thiolase family
ABD1_RS09805	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
ABD1_RS09810	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
ABD1_RS09820	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
ABD1_RS09825	COG2323	membrane
ABD1_RS09870	COG1902	pentaerythritol trinitrate reductase activity
ABD1_RS09870	COG0446	pyridine nucleotide-disulphide oxidoreductase
ABD1_RS09895	COG0542	response to heat
ABD1_RS09900	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
ABD1_RS09930	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
ABD1_RS09935	COG0569	domain protein
ABD1_RS09940	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
ABD1_RS09960	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ABD1_RS09985	COG1294	oxidase, subunit
ABD1_RS09990	COG4890	Cyd operon protein YbgT
ABD1_RS10000	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
ABD1_RS10010	COG0552	protein localization to endoplasmic reticulum
ABD1_RS10035	COG0517	IMP dehydrogenase activity
ABD1_RS10035	COG0516	GMP reductase activity
ABD1_RS10040	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
ABD1_RS10045	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
ABD1_RS10055	COG0583	DNA-binding transcription factor activity
ABD1_RS10060	COG0024	Methionine aminopeptidase
ABD1_RS10090	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
ABD1_RS10090	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
ABD1_RS10095	COG1105	Belongs to the carbohydrate kinase PfkB family
ABD1_RS10100	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ABD1_RS10100	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
ABD1_RS10100	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ABD1_RS10115	COG3300	MHYT domain
ABD1_RS10115	COG5001	Diguanylate cyclase
ABD1_RS10130	COG2135	peptidase activity
ABD1_RS10135	COG0659	secondary active sulfate transmembrane transporter activity
ABD1_RS10150	COG1113	amino acid transport
ABD1_RS10160	COG1522	sequence-specific DNA binding
ABD1_RS10185	COG1011	Hydrolase
ABD1_RS10190	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
ABD1_RS10200	COG2137	regulation of response to DNA damage stimulus
ABD1_RS10210	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ABD1_RS10230	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
ABD1_RS10245	COG0575	Belongs to the CDS family
ABD1_RS10250	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
ABD1_RS10270	COG3852	Histidine kinase
ABD1_RS10275	COG2204	response regulator
ABD1_RS10330	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
ABD1_RS10335	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
ABD1_RS10355	COG0697	spore germination
ABD1_RS10360	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ABD1_RS10370	COG0303	'Molybdopterin
ABD1_RS10375	COG0521	Mo-molybdopterin cofactor biosynthetic process
ABD1_RS10375	COG0315	cyclic pyranopterin monophosphate synthase activity
ABD1_RS10390	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
ABD1_RS10395	COG0243	molybdopterin cofactor binding
ABD1_RS10405	COG0243	molybdopterin cofactor binding
ABD1_RS10410	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ABD1_RS10415	COG2146	nitrite reductase [NAD(P)H] activity
ABD1_RS10415	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ABD1_RS10425	COG0745	RESPONSE REGULATOR receiver
ABD1_RS10430	COG1116	anion transmembrane transporter activity
ABD1_RS10430	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ABD1_RS10445	COG0511	ligase activity, forming carbon-carbon bonds
ABD1_RS10460	COG2814	Major facilitator Superfamily
ABD1_RS10485	COG0069	glutamate synthase activity
ABD1_RS10505	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
ABD1_RS10515	COG1454	alcohol dehydrogenase
ABD1_RS10520	COG0824	Thioesterase
ABD1_RS10530	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
ABD1_RS10545	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
ABD1_RS10550	COG2030	dehydratase
ABD1_RS10560	COG0183	Belongs to the thiolase family
ABD1_RS10570	COG0583	DNA-binding transcription factor activity
ABD1_RS10575	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
ABD1_RS10590	COG3135	benzoate transporter
ABD1_RS10600	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
ABD1_RS10620	COG0589	response to stress
ABD1_RS10625	COG0488	(ABC) transporter
ABD1_RS10650	COG4773	Receptor
ABD1_RS10680	COG0668	transmembrane transport
ABD1_RS10690	COG1309	transcriptional regulator
ABD1_RS10705	COG1605	Chorismate mutase
ABD1_RS10750	COG0308	aminopeptidase N
ABD1_RS10775	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
ABD1_RS10780	COG1454	alcohol dehydrogenase
ABD1_RS10800	COG0531	amino acid
ABD1_RS10805	COG4303	Ethanolamine ammonia lyase large subunit
ABD1_RS10810	COG4302	ethanolamine ammonia-lyase activity
ABD1_RS10815	COG0519	Catalyzes the synthesis of GMP from XMP
ABD1_RS10815	COG0518	GMP synthase (glutamine-hydrolyzing) activity
ABD1_RS10820	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
ABD1_RS10830	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ABD1_RS10840	COG0697	spore germination
ABD1_RS10845	COG1923	regulation of RNA biosynthetic process
ABD1_RS10855	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
ABD1_RS10860	COG0802	atpase or kinase
ABD1_RS10880	COG1187	pseudouridine synthase activity
ABD1_RS10895	COG0583	DNA-binding transcription factor activity
ABD1_RS10910	COG2814	Major facilitator Superfamily
ABD1_RS10915	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ABD1_RS10940	COG0729	surface antigen
ABD1_RS10960	COG0174	glutamine synthetase
ABD1_RS10965	COG0745	RESPONSE REGULATOR receiver
ABD1_RS10970	COG2205	protein histidine kinase activity
ABD1_RS10980	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
ABD1_RS10985	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
ABD1_RS11010	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ABD1_RS11015	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
ABD1_RS11020	COG1960	acyl-CoA dehydrogenase activity
ABD1_RS11050	COG0583	DNA-binding transcription factor activity
ABD1_RS11070	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ABD1_RS11080	COG3658	cytochrome
ABD1_RS11085	COG1215	transferase activity, transferring glycosyl groups
ABD1_RS11090	COG1649	PFAM Uncharacterised BCR, COG1649
ABD1_RS11090	COG0726	polysaccharide deacetylase
ABD1_RS11115	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
ABD1_RS11120	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
ABD1_RS11130	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
ABD1_RS11155	COG0305	Participates in initiation and elongation during chromosome replication
ABD1_RS11160	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
ABD1_RS11170	COG1305	Transglutaminase-like
ABD1_RS11180	COG2308	Evidence 4 Homologs of previously reported genes of
ABD1_RS11210	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
ABD1_RS11215	COG0138	bifunctional purine biosynthesis protein purh
ABD1_RS11220	COG0151	Belongs to the GarS family
ABD1_RS11225	COG1464	Belongs to the NlpA lipoprotein family
ABD1_RS11230	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
ABD1_RS11235	COG2011	ABC-type metal ion transport system permease component
ABD1_RS11240	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ABD1_RS11250	COG1301	dicarboxylic acid transport
ABD1_RS11280	COG1794	racemase activity, acting on amino acids and derivatives
ABD1_RS11290	COG3008	intermembrane lipid transfer
ABD1_RS11290	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
ABD1_RS11295	COG2995	paraquat-inducible protein a
ABD1_RS11325	COG1051	belongs to the nudix hydrolase family
ABD1_RS11330	COG0477	Major facilitator Superfamily
ABD1_RS11380	COG2186	Transcriptional regulator
ABD1_RS11390	COG0786	glutamate:sodium symporter activity
ABD1_RS11395	COG3243	poly(R)-hydroxyalkanoic acid synthase
ABD1_RS11420	COG3111	PFAM Bacterial OB fold (BOF) protein
ABD1_RS11510	COG1610	YqeY-like protein
ABD1_RS11515	COG4783	chaperone-mediated protein folding
ABD1_RS11540	COG1286	toxin biosynthetic process
ABD1_RS11570	COG0778	Nitroreductase
ABD1_RS11580	COG0513	Belongs to the DEAD box helicase family
ABD1_RS11600	COG2363	Small membrane protein
ABD1_RS11630	COG4650	regulator
ABD1_RS11635	COG1234	tRNA 3'-trailer cleavage
ABD1_RS11640	COG1690	Belongs to the RtcB family
ABD1_RS11660	COG2195	Cleaves the N-terminal amino acid of tripeptides
ABD1_RS11670	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
ABD1_RS11685	COG1960	acyl-CoA dehydrogenase activity
ABD1_RS11690	COG1301	dicarboxylic acid transport
ABD1_RS11695	COG0512	Glutamine amidotransferase of anthranilate synthase
ABD1_RS11695	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
ABD1_RS11700	COG3139	Protein of unknown function (DUF1315)
ABD1_RS11705	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
ABD1_RS11710	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
ABD1_RS11720	COG0494	nUDIX hydrolase
ABD1_RS11730	COG0642	Histidine kinase
ABD1_RS11745	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
ABD1_RS11755	COG1720	tRNA m6t6A37 methyltransferase activity
ABD1_RS11770	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ABD1_RS11775	COG0826	peptidase U32
ABD1_RS11780	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
ABD1_RS11790	COG4598	ABC transporter
ABD1_RS11795	COG4160	amino acid transport
ABD1_RS11800	COG4215	(ABC) transporter
ABD1_RS11815	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABD1_RS11855	COG1131	(ABC) transporter
ABD1_RS11860	COG0842	Transport permease protein
ABD1_RS11875	COG0772	Belongs to the SEDS family
ABD1_RS11880	COG2951	lytic endotransglycosylase activity
ABD1_RS11905	COG2207	Transcriptional regulator
ABD1_RS11920	COG0052	Belongs to the universal ribosomal protein uS2 family
ABD1_RS11925	COG0024	Methionine aminopeptidase
ABD1_RS11935	COG2223	nitrite transmembrane transporter activity
ABD1_RS11950	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ABD1_RS11955	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
ABD1_RS11960	COG1960	acyl-CoA dehydrogenase activity
ABD1_RS11975	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
ABD1_RS11980	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
ABD1_RS11985	COG1385	rRNA (uridine-N3-)-methyltransferase activity
ABD1_RS12005	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ABD1_RS12010	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
ABD1_RS12015	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
ABD1_RS12050	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
ABD1_RS12060	COG0174	glutamine synthetase
ABD1_RS12075	COG0512	Glutamine amidotransferase of anthranilate synthase
ABD1_RS12080	COG0308	aminopeptidase N
ABD1_RS12110	COG1529	Aldehyde oxidase and xanthine dehydrogenase
ABD1_RS12120	COG0302	gtp cyclohydrolase
ABD1_RS12140	COG3739	integral membrane protein
ABD1_RS12165	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
ABD1_RS12170	COG1132	(ABC) transporter
ABD1_RS12175	COG1132	(ABC) transporter
ABD1_RS12190	COG1535	isochorismatase
ABD1_RS12190	COG3433	isochorismatase activity
ABD1_RS12195	COG1021	2,3-dihydroxybenzoate-AMP ligase
ABD1_RS12200	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
ABD1_RS12210	COG4774	siderophore transport
ABD1_RS12215	COG4607	ABC-type enterochelin transport system periplasmic component
ABD1_RS12220	COG4604	ABC transporter, ATP-binding protein
ABD1_RS12225	COG4605	iron ion homeostasis
ABD1_RS12230	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ABD1_RS12235	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
ABD1_RS12250	COG2964	Protein conserved in bacteria
ABD1_RS12260	COG1741	Belongs to the pirin family
ABD1_RS12280	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ABD1_RS12290	COG0596	Alpha beta hydrolase
ABD1_RS12305	COG0583	DNA-binding transcription factor activity
ABD1_RS12310	COG1335	isochorismatase
ABD1_RS12350	COG2879	small protein
ABD1_RS12355	COG1966	Carbon starvation protein
ABD1_RS12375	COG4943	cyclic-guanylate-specific phosphodiesterase activity
ABD1_RS12400	COG1067	ATP-dependent peptidase activity
ABD1_RS12405	COG0583	DNA-binding transcription factor activity
ABD1_RS12430	COG1686	Belongs to the peptidase S11 family
ABD1_RS12435	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
ABD1_RS12480	COG0616	signal peptide processing
ABD1_RS12485	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
ABD1_RS12495	COG0573	inorganic phosphate transmembrane transporter activity
ABD1_RS12500	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
ABD1_RS12505	COG1113	amino acid transport
ABD1_RS12510	COG3961	Belongs to the TPP enzyme family
ABD1_RS12515	COG1522	sequence-specific DNA binding
ABD1_RS12525	COG0076	glutamate decarboxylase activity
ABD1_RS12530	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
ABD1_RS12545	COG2249	NAD(P)H dehydrogenase (quinone) activity
ABD1_RS12555	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ABD1_RS12590	COG0352	thiamine-phosphate diphosphorylase activity
ABD1_RS12615	COG0612	Peptidase, M16
ABD1_RS12625	COG1823	symporter activity
ABD1_RS12630	COG0583	DNA-binding transcription factor activity
ABD1_RS12635	COG0477	Major facilitator Superfamily
ABD1_RS12655	COG1187	pseudouridine synthase activity
ABD1_RS12670	COG1686	Belongs to the peptidase S11 family
ABD1_RS12675	COG1252	NADH dehydrogenase
ABD1_RS12685	COG0415	Belongs to the DNA photolyase family
ABD1_RS12700	COG1215	transferase activity, transferring glycosyl groups
ABD1_RS12730	COG2070	2-Nitropropane dioxygenase
ABD1_RS12785	COG0556	nucleotide-excision repair
ABD1_RS12805	COG0436	Aminotransferase
ABD1_RS12830	COG4221	oxidoreductase activity
ABD1_RS12840	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
ABD1_RS12845	COG1381	Involved in DNA repair and RecF pathway recombination
ABD1_RS12855	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
ABD1_RS12870	COG0681	Belongs to the peptidase S26 family
ABD1_RS12880	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
ABD1_RS12890	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ABD1_RS12910	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
ABD1_RS12915	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
ABD1_RS12920	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
ABD1_RS12930	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
ABD1_RS12935	COG4208	sulfate ABC transporter
ABD1_RS12940	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
ABD1_RS12945	COG0583	DNA-binding transcription factor activity
ABD1_RS12950	COG4625	pathogenesis
ABD1_RS12965	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
ABD1_RS12980	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
ABD1_RS12990	COG1051	belongs to the nudix hydrolase family
ABD1_RS12990	COG1056	cytidyltransferase-related domain
ABD1_RS12995	COG1024	Enoyl-CoA hydratase
ABD1_RS13010	COG2814	Major facilitator Superfamily
ABD1_RS13015	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
ABD1_RS13015	COG0047	phosphoribosylformylglycinamidine synthase activity
ABD1_RS13035	COG1473	amidohydrolase
ABD1_RS13040	COG0824	Thioesterase
ABD1_RS13060	COG0823	Involved in the tonB-independent uptake of proteins
ABD1_RS13080	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ABD1_RS13115	COG0628	permease
ABD1_RS13125	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
ABD1_RS13130	COG0596	Alpha beta hydrolase
ABD1_RS13135	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
ABD1_RS13135	COG0616	signal peptide processing
ABD1_RS13145	COG0658	competence protein
ABD1_RS13145	COG2333	competence protein COMEC
ABD1_RS13150	COG1136	(ABC) transporter
ABD1_RS13155	COG4591	ABC-type transport system involved in lipoprotein release permease component
ABD1_RS13185	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABD1_RS13205	COG0463	Glycosyl transferase, family 2
ABD1_RS13240	COG1280	lysine exporter protein (LysE YggA)
ABD1_RS13250	COG0019	diaminopimelate decarboxylase activity
ABD1_RS13260	COG1113	amino acid transport
ABD1_RS13275	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
ABD1_RS13285	COG3339	Conserved Protein
ABD1_RS13290	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
ABD1_RS13295	COG0243	molybdopterin cofactor binding
ABD1_RS13300	COG1929	Belongs to the glycerate kinase type-1 family
ABD1_RS13315	COG0778	Nitroreductase
ABD1_RS13340	COG3811	Belongs to the UPF0386 family
ABD1_RS13350	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
ABD1_RS13365	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
ABD1_RS13385	COG0741	lytic transglycosylase activity
ABD1_RS13405	COG0584	glycerophosphoryl diester phosphodiesterase
ABD1_RS13430	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
ABD1_RS13435	COG1597	lipid kinase activity
ABD1_RS13450	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
ABD1_RS13455	COG0477	Major facilitator Superfamily
ABD1_RS13505	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
ABD1_RS13510	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
ABD1_RS13535	COG0505	Belongs to the CarA family
ABD1_RS13555	COG0589	response to stress
ABD1_RS13570	COG2843	Capsule synthesis protein
ABD1_RS13585	COG2321	neutral zinc metallopeptidase
ABD1_RS13590	COG2354	Protein conserved in bacteria
ABD1_RS13610	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ABD1_RS13625	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
ABD1_RS13630	COG1053	succinate dehydrogenase
ABD1_RS13635	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
ABD1_RS13640	COG2009	succinate dehydrogenase
ABD1_RS13680	COG2921	Belongs to the UPF0250 family
ABD1_RS13685	COG0321	lipoyl(octanoyl) transferase activity
ABD1_RS13700	COG0531	amino acid
ABD1_RS13710	COG1733	regulation of RNA biosynthetic process
ABD1_RS13715	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
ABD1_RS13720	COG1648	precorrin-2 dehydrogenase activity
ABD1_RS13720	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
ABD1_RS13735	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
ABD1_RS13765	COG0671	phosphoesterase, PA-phosphatase related
ABD1_RS13770	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABD1_RS13780	COG1538	Outer membrane efflux protein
ABD1_RS13785	COG0393	Putative heavy-metal-binding
ABD1_RS13790	COG0393	Putative heavy-metal-binding
ABD1_RS13800	COG1028	Short-chain dehydrogenase reductase Sdr
ABD1_RS13810	COG0525	valine-tRNA ligase activity
ABD1_RS13830	COG0583	DNA-binding transcription factor activity
ABD1_RS13835	COG0004	ammonium transporteR
ABD1_RS13845	COG0642	Histidine kinase
ABD1_RS13850	COG0745	RESPONSE REGULATOR receiver
ABD1_RS13855	COG2194	sulfuric ester hydrolase activity
ABD1_RS13875	COG1752	Esterase of the alpha-beta hydrolase superfamily
ABD1_RS13890	COG2315	Protein conserved in bacteria
ABD1_RS13895	COG0142	geranyltranstransferase activity
ABD1_RS13900	COG2828	Protein conserved in bacteria
ABD1_RS13905	COG1113	amino acid transport
ABD1_RS13950	COG2207	Transcriptional regulator
ABD1_RS13975	COG2249	NAD(P)H dehydrogenase (quinone) activity
ABD1_RS13995	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
ABD1_RS14005	COG1530	ribonuclease E activity
ABD1_RS14010	COG0424	maF-like protein
ABD1_RS14015	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
ABD1_RS14020	COG1792	Involved in formation and maintenance of cell shape
ABD1_RS14025	COG1077	Cell shape determining protein MreB Mrl
ABD1_RS14030	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
ABD1_RS14040	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
ABD1_RS14065	COG3590	peptidase
ABD1_RS14070	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
ABD1_RS14075	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
ABD1_RS14080	COG1752	Esterase of the alpha-beta hydrolase superfamily
ABD1_RS14085	COG1115	amino acid carrier protein
ABD1_RS14100	COG2814	Major facilitator Superfamily
ABD1_RS14105	COG1289	transmembrane transporter activity
ABD1_RS14115	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
ABD1_RS14140	COG1376	ErfK ybiS ycfS ynhG family protein
ABD1_RS14145	COG2832	Protein of unknown function (DUF454)
ABD1_RS14155	COG5510	response to toxic substance
ABD1_RS14180	COG0840	transmembrane signaling receptor activity
ABD1_RS14220	COG3422	double-strand break repair
ABD1_RS14225	COG2824	Alkylphosphonate utilization operon protein PhnA
ABD1_RS14230	COG3189	MarR family transcriptional regulator
ABD1_RS14240	COG0354	folic acid binding
ABD1_RS14245	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
ABD1_RS14260	COG1902	pentaerythritol trinitrate reductase activity
ABD1_RS14265	COG4772	TonB-dependent receptor
ABD1_RS14270	COG2094	Belongs to the DNA glycosylase MPG family
ABD1_RS14295	COG1217	gtp-binding protein TYPA
ABD1_RS14300	COG2233	PERMEase
ABD1_RS14310	COG0833	amino acid
ABD1_RS14315	COG1690	Belongs to the RtcB family
ABD1_RS14325	COG2885	chlorophyll binding
ABD1_RS14325	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
ABD1_RS14335	COG0183	Belongs to the thiolase family
ABD1_RS14355	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ABD1_RS14380	COG0183	Belongs to the thiolase family
ABD1_RS14410	COG1272	protein, Hemolysin III
ABD1_RS14415	COG0477	Major facilitator Superfamily
ABD1_RS14430	COG0450	alkyl hydroperoxide reductase
ABD1_RS14450	COG0285	dihydrofolate synthase activity
ABD1_RS14500	COG2096	Adenosyltransferase
ABD1_RS14520	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
ABD1_RS14525	COG0745	RESPONSE REGULATOR receiver
ABD1_RS14530	COG2205	protein histidine kinase activity
ABD1_RS14540	COG1960	acyl-CoA dehydrogenase activity
ABD1_RS14545	COG1960	acyl-CoA dehydrogenase activity
ABD1_RS14595	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
ABD1_RS14610	COG0438	transferase activity, transferring glycosyl groups
ABD1_RS14615	COG0463	Glycosyl transferase, family 2
ABD1_RS14620	COG0726	polysaccharide deacetylase
ABD1_RS14640	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
ABD1_RS14645	COG2205	protein histidine kinase activity
ABD1_RS14680	COG1862	Preprotein translocase
ABD1_RS14690	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
ABD1_RS14695	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
ABD1_RS14705	COG3781	membrane
ABD1_RS14710	COG0613	PHP domain protein
ABD1_RS14720	COG2350	Protein conserved in bacteria
ABD1_RS14750	COG1607	acyl-coa hydrolase
ABD1_RS14810	COG2199	diguanylate cyclase activity
ABD1_RS14820	COG1408	metallophosphoesterase
ABD1_RS14825	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ABD1_RS14835	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
ABD1_RS14855	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
ABD1_RS14860	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
ABD1_RS14865	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
ABD1_RS14875	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
ABD1_RS14885	COG2969	positive regulation of protein catabolic process
ABD1_RS14905	COG1960	acyl-CoA dehydrogenase activity
ABD1_RS14910	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
ABD1_RS14925	COG1309	transcriptional regulator
ABD1_RS14930	COG1960	acyl-CoA dehydrogenase activity
ABD1_RS14975	COG1183	phosphatidylcholine synthase activity
ABD1_RS14980	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
ABD1_RS15010	COG1196	nuclear chromosome segregation
ABD1_RS15010	COG0739	heme binding
ABD1_RS15010	COG0741	lytic transglycosylase activity
ABD1_RS15020	COG1702	phosphate starvation-inducible protein PhoH
ABD1_RS15055	COG1295	ribonuclease BN
ABD1_RS15060	COG0697	spore germination
ABD1_RS15065	COG2169	Transcriptional regulator
ABD1_RS15070	COG0179	Fumarylacetoacetate (FAA) hydrolase
ABD1_RS15115	COG0557	exoribonuclease II activity
ABD1_RS15120	COG0339	signal peptide processing
ABD1_RS15125	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
ABD1_RS15155	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
ABD1_RS15160	COG1960	acyl-CoA dehydrogenase activity
ABD1_RS15315	COG0626	cystathionine gamma-synthase activity
ABD1_RS15320	COG0433	COG0433 Predicted ATPase
ABD1_RS15325	COG1017	nitric oxide dioxygenase activity
ABD1_RS15325	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ABD1_RS15330	COG1959	2 iron, 2 sulfur cluster binding
ABD1_RS15345	COG1301	dicarboxylic acid transport
ABD1_RS15350	COG1946	Acyl-CoA thioesterase
ABD1_RS15370	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
ABD1_RS15375	COG1040	competence protein
ABD1_RS15380	COG0494	nUDIX hydrolase
ABD1_RS15390	COG0598	Magnesium transport protein CorA
ABD1_RS15400	COG2854	intermembrane phospholipid transfer
ABD1_RS15410	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
ABD1_RS15415	COG1127	ABC transporter
ABD1_RS15425	COG0513	Belongs to the DEAD box helicase family
ABD1_RS15445	COG0408	coproporphyrinogen oxidase activity
ABD1_RS15460	COG1960	acyl-CoA dehydrogenase activity
ABD1_RS15470	COG1983	PspC domain protein
ABD1_RS15475	COG0517	IMP dehydrogenase activity
ABD1_RS15520	COG0583	DNA-binding transcription factor activity
ABD1_RS15560	COG1012	belongs to the aldehyde dehydrogenase family
ABD1_RS15570	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
ABD1_RS15575	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
ABD1_RS15580	COG0833	amino acid
ABD1_RS15610	COG1192	Involved in chromosome partitioning
ABD1_RS15615	COG0628	permease
ABD1_RS15625	COG1289	transmembrane transporter activity
ABD1_RS15640	COG2249	NAD(P)H dehydrogenase (quinone) activity
ABD1_RS15645	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
ABD1_RS15655	COG0277	FAD linked oxidase domain protein
ABD1_RS15660	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
ABD1_RS15685	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
ABD1_RS15690	COG5380	lipid catabolic process
ABD1_RS15710	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
ABD1_RS15760	COG0194	GDP metabolic process
ABD1_RS15770	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
ABD1_RS15790	COG3307	-O-antigen
ABD1_RS15810	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
ABD1_RS15815	COG1704	LemA family
ABD1_RS15825	COG0493	'glutamate synthase
ABD1_RS15830	COG0067	glutamate synthase
ABD1_RS15830	COG0069	glutamate synthase activity
ABD1_RS15830	COG0070	glutamate synthase
ABD1_RS15880	COG2226	methyltransferase
ABD1_RS15895	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
ABD1_RS15900	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
ABD1_RS15945	COG0833	amino acid
ABD1_RS16010	COG0488	(ABC) transporter
ABD1_RS16015	COG2873	o-acetylhomoserine
ABD1_RS16020	COG4221	oxidoreductase activity
ABD1_RS16025	COG0659	secondary active sulfate transmembrane transporter activity
ABD1_RS16045	COG0427	acetyl-CoA hydrolase
ABD1_RS16075	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
ABD1_RS16115	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
ABD1_RS16170	COG2207	Transcriptional regulator
ABD1_RS16175	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
ABD1_RS16195	COG2249	NAD(P)H dehydrogenase (quinone) activity
ABD1_RS16200	COG1733	regulation of RNA biosynthetic process
ABD1_RS16220	COG1733	regulation of RNA biosynthetic process
ABD1_RS16250	COG0667	Aldo Keto reductase
ABD1_RS16300	COG1309	transcriptional regulator
ABD1_RS16315	COG0583	DNA-binding transcription factor activity
ABD1_RS16320	COG2814	Major facilitator Superfamily
ABD1_RS16350	COG1401	restriction endodeoxyribonuclease activity
ABD1_RS16400	COG1335	isochorismatase
ABD1_RS16410	COG1012	belongs to the aldehyde dehydrogenase family
ABD1_RS16415	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
ABD1_RS16425	COG1113	amino acid transport
ABD1_RS16435	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
ABD1_RS16450	COG2814	Major facilitator Superfamily
ABD1_RS16460	COG0351	phosphomethylpyrimidine kinase
ABD1_RS16460	COG0352	thiamine-phosphate diphosphorylase activity
ABD1_RS16460	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
ABD1_RS16480	COG1309	transcriptional regulator
ABD1_RS16485	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
ABD1_RS16500	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
ABD1_RS16510	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ABD1_RS16515	COG3162	membrane
ABD1_RS16520	COG2205	protein histidine kinase activity
ABD1_RS16520	COG0784	Response regulator, receiver
ABD1_RS16520	COG2198	Histidine kinase
ABD1_RS16545	COG1522	sequence-specific DNA binding
ABD1_RS16550	COG1335	isochorismatase
ABD1_RS16555	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
ABD1_RS16565	COG0668	transmembrane transport
ABD1_RS16570	COG1385	rRNA (uridine-N3-)-methyltransferase activity
ABD1_RS16575	COG1519	Transferase
ABD1_RS16580	COG1902	pentaerythritol trinitrate reductase activity
ABD1_RS16600	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
ABD1_RS16625	COG0426	domain, Protein
ABD1_RS16625	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ABD1_RS16630	COG4774	siderophore transport
ABD1_RS16635	COG2119	membrane
ABD1_RS16645	COG0508	dehydrogenase complex catalyzes the overall conversion of
ABD1_RS16655	COG4942	peptidase
ABD1_RS16670	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
ABD1_RS16680	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
ABD1_RS16700	COG0189	ligase activity
ABD1_RS16725	COG0708	Exodeoxyribonuclease III
ABD1_RS16730	COG1393	Belongs to the ArsC family
ABD1_RS16745	COG3706	GGDEF domain
ABD1_RS16780	COG2351	hydroxyisourate hydrolase activity
ABD1_RS16795	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ABD1_RS16805	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
ABD1_RS16820	COG3150	esterase
ABD1_RS16870	COG3179	chitinase
ABD1_RS16885	COG2918	glutathione biosynthetic process
ABD1_RS16900	COG2733	membrane
ABD1_RS16905	COG0436	Aminotransferase
ABD1_RS16910	COG0534	Mate efflux family protein
ABD1_RS16960	COG0753	catalase activity
ABD1_RS17005	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
ABD1_RS17010	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
ABD1_RS17020	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
ABD1_RS17035	COG1280	lysine exporter protein (LysE YggA)
ABD1_RS17040	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
ABD1_RS17045	COG0546	phosphoglycolate phosphatase activity
ABD1_RS17065	COG0010	Belongs to the arginase family
ABD1_RS17095	COG2188	Transcriptional regulator
ABD1_RS17125	COG0625	glutathione transferase activity
ABD1_RS17145	COG1683	Conserved Protein
ABD1_RS17150	COG0534	Mate efflux family protein
ABD1_RS17155	COG0385	Bile acid
ABD1_RS17160	COG1335	isochorismatase
ABD1_RS17165	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ABD1_RS17185	COG2116	formate transmembrane transporter activity
ABD1_RS17190	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
ABD1_RS17195	COG2133	pyrroloquinoline quinone binding
ABD1_RS17200	COG2983	Belongs to the UPF0260 family
ABD1_RS17220	COG1194	a g-specific adenine glycosylase
ABD1_RS17235	COG2818	Glycosylase
ABD1_RS17240	COG1064	alcohol dehydrogenase
ABD1_RS17245	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ABD1_RS17255	COG0583	DNA-binding transcription factor activity
ABD1_RS17260	COG0656	L-ascorbic acid biosynthetic process
ABD1_RS17265	COG2814	Major facilitator Superfamily
ABD1_RS17300	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABD1_RS17315	COG2233	PERMEase
ABD1_RS17320	COG0583	DNA-binding transcription factor activity
ABD1_RS17355	COG0733	neurotransmitter:sodium symporter activity
ABD1_RS17395	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
ABD1_RS17420	COG0583	DNA-binding transcription factor activity
ABD1_RS17450	COG2951	lytic endotransglycosylase activity
ABD1_RS17455	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
ABD1_RS17470	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
ABD1_RS17480	COG0671	phosphoesterase, PA-phosphatase related
ABD1_RS17485	COG0861	Integral membrane protein TerC family
ABD1_RS17495	COG0754	glutathionylspermidine amidase activity
ABD1_RS17505	COG0402	S-adenosylhomocysteine deaminase activity
ABD1_RS17525	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
ABD1_RS17530	COG1230	cation diffusion facilitator family transporter
ABD1_RS17545	COG0706	membrane insertase activity