locus-tag class description AbD4_RS00005 PF00579 tRNA synthetases class I (W and Y) AbD4_RS00010 PF03702 Anhydro-N-acetylmuramic acid kinase AbD4_RS00015 PF00561 alpha/beta hydrolase fold AbD4_RS00020 PF01521 Iron-sulphur cluster biosynthesis AbD4_RS00040 PF00005 ABC transporter AbD4_RS00040 PF12848 ABC transporter AbD4_RS00045 PF09335 SNARE associated Golgi protein AbD4_RS00055 PF01751 Toprim domain AbD4_RS00055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AbD4_RS00055 PF18053 DNA gyrase B subunit insert domain AbD4_RS00055 PF00204 DNA gyrase B AbD4_RS00055 PF00986 DNA gyrase B subunit, carboxyl terminus AbD4_RS00060 PF02463 RecF/RecN/SMC N terminal domain AbD4_RS00065 PF02767 DNA polymerase III beta subunit, central domain AbD4_RS00065 PF00712 DNA polymerase III beta subunit, N-terminal domain AbD4_RS00065 PF02768 DNA polymerase III beta subunit, C-terminal domain AbD4_RS00075 PF11638 DnaA N-terminal domain AbD4_RS00075 PF08299 Bacterial dnaA protein helix-turn-helix AbD4_RS00075 PF00308 Bacterial dnaA protein AbD4_RS00080 PF00468 Ribosomal protein L34 AbD4_RS00085 PF00825 Ribonuclease P AbD4_RS00090 PF01809 Putative membrane protein insertion efficiency factor AbD4_RS00095 PF02096 60Kd inner membrane protein AbD4_RS00095 PF14849 YidC periplasmic domain AbD4_RS00100 PF10396 GTP-binding protein TrmE N-terminus AbD4_RS00100 PF01926 50S ribosome-binding GTPase AbD4_RS00100 PF12631 MnmE helical domain AbD4_RS00105 PF02899 Phage integrase, N-terminal SAM-like domain AbD4_RS00105 PF00589 Phage integrase family AbD4_RS00150 PF06122 Conjugative relaxosome accessory transposon protein AbD4_RS00180 PF06616 BsuBI/PstI restriction endonuclease domain AbD4_RS00180 PF17728 BsuBI/PstI restriction endonuclease HTH domain AbD4_RS00190 PF00239 Resolvase, N terminal domain AbD4_RS00190 PF02796 Helix-turn-helix domain of resolvase AbD4_RS00195 PF13495 Phage integrase, N-terminal SAM-like domain AbD4_RS00195 PF00589 Phage integrase family AbD4_RS00200 PF00893 Small Multidrug Resistance protein AbD4_RS00210 PF01636 Phosphotransferase enzyme family AbD4_RS00215 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase AbD4_RS00220 PF00589 Phage integrase family AbD4_RS00220 PF13495 Phage integrase, N-terminal SAM-like domain AbD4_RS00225 PF10706 Aminoglycoside-2''-adenylyltransferase AbD4_RS00230 PF00893 Small Multidrug Resistance protein AbD4_RS00235 PF00809 Pterin binding enzyme AbD4_RS00260 PF01609 Transposase DDE domain AbD4_RS00270 PF13538 UvrD-like helicase C-terminal domain AbD4_RS00275 PF01797 Transposase IS200 like AbD4_RS00280 PF07282 Putative transposase DNA-binding domain AbD4_RS00280 PF01385 Probable transposase AbD4_RS00280 PF12323 Helix-turn-helix domain AbD4_RS00290 PF13005 zinc-finger binding domain of transposase IS66 AbD4_RS00290 PF13007 Transposase C of IS166 homeodomain AbD4_RS00290 PF13817 IS66 C-terminal element AbD4_RS00290 PF03050 Transposase IS66 family AbD4_RS00305 PF12323 Helix-turn-helix domain AbD4_RS00305 PF01385 Probable transposase AbD4_RS00305 PF07282 Putative transposase DNA-binding domain AbD4_RS00310 PF13700 Domain of unknown function (DUF4158) AbD4_RS00310 PF01526 Tn3 transposase DDE domain AbD4_RS00315 PF00239 Resolvase, N terminal domain AbD4_RS00315 PF02796 Helix-turn-helix domain of resolvase AbD4_RS00320 PF00589 Phage integrase family AbD4_RS00320 PF13495 Phage integrase, N-terminal SAM-like domain AbD4_RS00330 PF00893 Small Multidrug Resistance protein AbD4_RS00335 PF00809 Pterin binding enzyme AbD4_RS00345 PF13610 DDE domain AbD4_RS00355 PF02583 Metal-sensitive transcriptional repressor AbD4_RS00360 PF16916 Dimerisation domain of Zinc Transporter AbD4_RS00360 PF01545 Cation efflux family AbD4_RS00365 PF13098 Thioredoxin-like domain AbD4_RS00365 PF10411 Disulfide bond isomerase protein N-terminus AbD4_RS00375 PF00156 Phosphoribosyl transferase domain AbD4_RS00380 PF01979 Amidohydrolase family AbD4_RS00385 PF00355 Rieske [2Fe-2S] domain AbD4_RS00390 PF03738 Glutathionylspermidine synthase preATP-grasp AbD4_RS00400 PF03741 Integral membrane protein TerC family AbD4_RS00405 PF01569 PAP2 superfamily AbD4_RS00415 PF02875 Mur ligase family, glutamate ligase domain AbD4_RS00415 PF01225 Mur ligase family, catalytic domain AbD4_RS00415 PF08245 Mur ligase middle domain AbD4_RS00425 PF00731 AIR carboxylase AbD4_RS00430 PF02222 ATP-grasp domain AbD4_RS00430 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AbD4_RS00435 PF13406 Transglycosylase SLT domain AbD4_RS00455 PF00012 Hsp70 protein AbD4_RS00460 PF01025 GrpE AbD4_RS00465 PF03466 LysR substrate binding domain AbD4_RS00465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS00485 PF07859 alpha/beta hydrolase fold AbD4_RS00490 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AbD4_RS00540 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AbD4_RS00545 PF01252 Signal peptidase (SPase) II AbD4_RS00550 PF08264 Anticodon-binding domain of tRNA AbD4_RS00550 PF06827 Zinc finger found in FPG and IleRS AbD4_RS00550 PF00133 tRNA synthetases class I (I, L, M and V) AbD4_RS00555 PF01687 Riboflavin kinase AbD4_RS00555 PF06574 FAD synthetase AbD4_RS00565 PF01048 Phosphorylase superfamily AbD4_RS00570 PF00440 Bacterial regulatory proteins, tetR family AbD4_RS00570 PF08362 YcdC-like protein, C-terminal region AbD4_RS00575 PF00005 ABC transporter AbD4_RS00580 PF00528 Binding-protein-dependent transport system inner membrane component AbD4_RS00585 PF00296 Luciferase-like monooxygenase AbD4_RS00590 PF09084 NMT1/THI5 like AbD4_RS00595 PF09084 NMT1/THI5 like AbD4_RS00600 PF00583 Acetyltransferase (GNAT) family AbD4_RS00600 PF00696 Amino acid kinase family AbD4_RS00615 PF00106 short chain dehydrogenase AbD4_RS00620 PF13419 Haloacid dehalogenase-like hydrolase AbD4_RS00630 PF01323 DSBA-like thioredoxin domain AbD4_RS00635 PF00440 Bacterial regulatory proteins, tetR family AbD4_RS00635 PF08360 QacR-like protein, C-terminal region AbD4_RS00640 PF00440 Bacterial regulatory proteins, tetR family AbD4_RS00645 PF00175 Oxidoreductase NAD-binding domain AbD4_RS00650 PF00487 Fatty acid desaturase AbD4_RS00655 PF03725 3' exoribonuclease family, domain 2 AbD4_RS00655 PF01138 3' exoribonuclease family, domain 1 AbD4_RS00660 PF04185 Phosphoesterase family AbD4_RS00660 PF05506 Domain of unknown function (DUF756) AbD4_RS00670 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AbD4_RS00670 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AbD4_RS00675 PF01510 N-acetylmuramoyl-L-alanine amidase AbD4_RS00680 PF03023 Lipid II flippase MurJ AbD4_RS00685 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AbD4_RS00685 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AbD4_RS00690 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AbD4_RS00690 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AbD4_RS00695 PF13614 AAA domain AbD4_RS00695 PF13807 G-rich domain on putative tyrosine kinase AbD4_RS00695 PF02706 Chain length determinant protein AbD4_RS00700 PF01451 Low molecular weight phosphotyrosine protein phosphatase AbD4_RS00705 PF10531 SLBB domain AbD4_RS00705 PF18412 Outer-membrane lipoprotein Wza C-terminal domain AbD4_RS00705 PF02563 Polysaccharide biosynthesis/export protein AbD4_RS00710 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AbD4_RS00710 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AbD4_RS00710 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AbD4_RS00715 PF02719 Polysaccharide biosynthesis protein AbD4_RS00720 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AbD4_RS00725 PF02348 Cytidylyltransferase AbD4_RS00740 PF03102 NeuB family AbD4_RS00740 PF08666 SAF domain AbD4_RS00745 PF01943 Polysaccharide biosynthesis protein AbD4_RS00760 PF00535 Glycosyl transferase family 2 AbD4_RS00765 PF02397 Bacterial sugar transferase AbD4_RS00770 PF00483 Nucleotidyl transferase AbD4_RS00775 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AbD4_RS00775 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AbD4_RS00775 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AbD4_RS00780 PF00342 Phosphoglucose isomerase AbD4_RS00785 PF16363 GDP-mannose 4,6 dehydratase AbD4_RS00790 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AbD4_RS00790 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AbD4_RS00790 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AbD4_RS00790 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AbD4_RS00795 PF02652 L-lactate permease AbD4_RS00800 PF07729 FCD domain AbD4_RS00800 PF00392 Bacterial regulatory proteins, gntR family AbD4_RS00805 PF01070 FMN-dependent dehydrogenase AbD4_RS00810 PF01565 FAD binding domain AbD4_RS00810 PF09330 D-lactate dehydrogenase, membrane binding AbD4_RS00815 PF00155 Aminotransferase class I and II AbD4_RS00825 PF00392 Bacterial regulatory proteins, gntR family AbD4_RS00825 PF07729 FCD domain AbD4_RS00835 PF00285 Citrate synthase, C-terminal domain AbD4_RS00840 PF00330 Aconitase family (aconitate hydratase) AbD4_RS00840 PF00694 Aconitase C-terminal domain AbD4_RS00865 PF03050 Transposase IS66 family AbD4_RS00865 PF13817 IS66 C-terminal element AbD4_RS00865 PF13007 Transposase C of IS166 homeodomain AbD4_RS00865 PF13005 zinc-finger binding domain of transposase IS66 AbD4_RS00900 PF00109 Beta-ketoacyl synthase, N-terminal domain AbD4_RS00900 PF02801 Beta-ketoacyl synthase, C-terminal domain AbD4_RS00910 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) AbD4_RS00910 PF04717 Type VI secretion system, phage-baseplate injector AbD4_RS00910 PF13296 Putative type VI secretion system Rhs element Vgr AbD4_RS00955 PF00849 RNA pseudouridylate synthase AbD4_RS00970 PF07715 TonB-dependent Receptor Plug Domain AbD4_RS00970 PF00593 TonB dependent receptor AbD4_RS00980 PF01037 Lrp/AsnC ligand binding domain AbD4_RS00985 PF01266 FAD dependent oxidoreductase AbD4_RS00990 PF01168 Alanine racemase, N-terminal domain AbD4_RS00990 PF00842 Alanine racemase, C-terminal domain AbD4_RS00995 PF01042 Endoribonuclease L-PSP AbD4_RS01000 PF00324 Amino acid permease AbD4_RS01005 PF00324 Amino acid permease AbD4_RS01015 PF00171 Aldehyde dehydrogenase family AbD4_RS01020 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AbD4_RS01020 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AbD4_RS01025 PF00501 AMP-binding enzyme AbD4_RS01025 PF13193 AMP-binding enzyme C-terminal domain AbD4_RS01030 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AbD4_RS01030 PF02770 Acyl-CoA dehydrogenase, middle domain AbD4_RS01030 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AbD4_RS01035 PF00378 Enoyl-CoA hydratase/isomerase AbD4_RS01040 PF00378 Enoyl-CoA hydratase/isomerase AbD4_RS01045 PF07690 Major Facilitator Superfamily AbD4_RS01045 PF00083 Sugar (and other) transporter AbD4_RS01050 PF00765 Autoinducer synthase AbD4_RS01060 PF00196 Bacterial regulatory proteins, luxR family AbD4_RS01060 PF03472 Autoinducer binding domain AbD4_RS01065 PF00501 AMP-binding enzyme AbD4_RS01070 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AbD4_RS01070 PF02770 Acyl-CoA dehydrogenase, middle domain AbD4_RS01070 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AbD4_RS01075 PF14765 Polyketide synthase dehydratase AbD4_RS01075 PF00550 Phosphopantetheine attachment site AbD4_RS01075 PF08242 Methyltransferase domain AbD4_RS01075 PF16197 Ketoacyl-synthetase C-terminal extension AbD4_RS01075 PF00975 Thioesterase domain AbD4_RS01075 PF02801 Beta-ketoacyl synthase, C-terminal domain AbD4_RS01075 PF00109 Beta-ketoacyl synthase, N-terminal domain AbD4_RS01080 PF00501 AMP-binding enzyme AbD4_RS01080 PF13193 AMP-binding enzyme C-terminal domain AbD4_RS01080 PF00668 Condensation domain AbD4_RS01080 PF00550 Phosphopantetheine attachment site AbD4_RS01080 PF00975 Thioesterase domain AbD4_RS01095 PF16363 GDP-mannose 4,6 dehydratase AbD4_RS01100 PF01648 4'-phosphopantetheinyl transferase superfamily AbD4_RS01115 PF01722 BolA-like protein AbD4_RS01125 PF13614 AAA domain AbD4_RS01140 PF13817 IS66 C-terminal element AbD4_RS01140 PF13007 Transposase C of IS166 homeodomain AbD4_RS01140 PF03050 Transposase IS66 family AbD4_RS01140 PF13005 zinc-finger binding domain of transposase IS66 AbD4_RS01160 PF09335 SNARE associated Golgi protein AbD4_RS01165 PF07681 DoxX AbD4_RS01170 PF04286 Protein of unknown function (DUF445) AbD4_RS01175 PF00117 Glutamine amidotransferase class-I AbD4_RS01175 PF00958 GMP synthase C terminal domain AbD4_RS01175 PF02540 NAD synthase AbD4_RS01180 PF01909 Nucleotidyltransferase domain AbD4_RS01180 PF13427 Domain of unknown function (DUF4111) AbD4_RS01185 PF03551 Transcriptional regulator PadR-like family AbD4_RS01195 PF02678 Pirin AbD4_RS01195 PF05726 Pirin C-terminal cupin domain AbD4_RS01215 PF03485 Arginyl tRNA synthetase N terminal domain AbD4_RS01215 PF05746 DALR anticodon binding domain AbD4_RS01215 PF00750 tRNA synthetases class I (R) AbD4_RS01220 PF00390 Malic enzyme, N-terminal domain AbD4_RS01220 PF03949 Malic enzyme, NAD binding domain AbD4_RS01225 PF04261 Dyp-type peroxidase family AbD4_RS01230 PF01810 LysE type translocator AbD4_RS01235 PF00950 ABC 3 transport family AbD4_RS01240 PF00005 ABC transporter AbD4_RS01260 PF00119 ATP synthase A chain AbD4_RS01265 PF00137 ATP synthase subunit C AbD4_RS01270 PF00430 ATP synthase B/B' CF(0) AbD4_RS01275 PF00213 ATP synthase delta (OSCP) subunit AbD4_RS01280 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AbD4_RS01280 PF00306 ATP synthase alpha/beta chain, C terminal domain AbD4_RS01280 PF02874 ATP synthase alpha/beta family, beta-barrel domain AbD4_RS01285 PF00231 ATP synthase AbD4_RS01290 PF02874 ATP synthase alpha/beta family, beta-barrel domain AbD4_RS01290 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AbD4_RS01295 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AbD4_RS01305 PF00255 Glutathione peroxidase AbD4_RS01315 PF07690 Major Facilitator Superfamily AbD4_RS01320 PF00440 Bacterial regulatory proteins, tetR family AbD4_RS01325 PF00892 EamA-like transporter family AbD4_RS01330 PF01300 Telomere recombination AbD4_RS01335 PF17782 DprA winged helix domain AbD4_RS01335 PF02481 DNA recombination-mediator protein A AbD4_RS01345 PF01327 Polypeptide deformylase AbD4_RS01405 PF00291 Pyridoxal-phosphate dependent enzyme AbD4_RS01415 PF03358 NADPH-dependent FMN reductase AbD4_RS01435 PF04055 Radical SAM superfamily AbD4_RS01435 PF08497 Radical SAM N-terminal AbD4_RS01435 PF11842 Domain of unknown function (DUF3362) AbD4_RS01455 PF06123 Inner membrane protein CreD AbD4_RS01460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AbD4_RS01460 PF00512 His Kinase A (phospho-acceptor) domain AbD4_RS01460 PF00672 HAMP domain AbD4_RS01465 PF00072 Response regulator receiver domain AbD4_RS01465 PF00486 Transcriptional regulatory protein, C terminal AbD4_RS01470 PF11799 impB/mucB/samB family C-terminal domain AbD4_RS01470 PF00817 impB/mucB/samB family AbD4_RS01470 PF11798 IMS family HHH motif AbD4_RS01480 PF07690 Major Facilitator Superfamily AbD4_RS01485 PF03641 Possible lysine decarboxylase AbD4_RS01490 PF03471 Transporter associated domain AbD4_RS01490 PF03741 Integral membrane protein TerC family AbD4_RS01495 PF02810 SEC-C motif AbD4_RS01500 PF03458 UPF0126 domain AbD4_RS01505 PF07690 Major Facilitator Superfamily AbD4_RS01510 PF03989 DNA gyrase C-terminal domain, beta-propeller AbD4_RS01510 PF00521 DNA gyrase/topoisomerase IV, subunit A AbD4_RS01515 PF00501 AMP-binding enzyme AbD4_RS01515 PF13193 AMP-binding enzyme C-terminal domain AbD4_RS01530 PF00719 Inorganic pyrophosphatase AbD4_RS01535 PF03573 outer membrane porin, OprD family AbD4_RS01545 PF00701 Dihydrodipicolinate synthetase family AbD4_RS01555 PF13610 DDE domain AbD4_RS01560 PF00497 Bacterial extracellular solute-binding proteins, family 3 AbD4_RS01565 PF00528 Binding-protein-dependent transport system inner membrane component AbD4_RS01570 PF00005 ABC transporter AbD4_RS01575 PF01636 Phosphotransferase enzyme family AbD4_RS01580 PF13610 DDE domain AbD4_RS01595 PF00582 Universal stress protein family AbD4_RS01600 PF00916 Sulfate permease family AbD4_RS01600 PF01740 STAS domain AbD4_RS01620 PF00543 Nitrogen regulatory protein P-II AbD4_RS01625 PF00909 Ammonium Transporter Family AbD4_RS01630 PF03477 ATP cone domain AbD4_RS01635 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AbD4_RS01635 PF01872 RibD C-terminal domain AbD4_RS01645 PF00677 Lumazine binding domain AbD4_RS01665 PF00883 Cytosol aminopeptidase family, catalytic domain AbD4_RS01665 PF02789 Cytosol aminopeptidase family, N-terminal domain AbD4_RS01675 PF03739 Lipopolysaccharide export system permease LptF/LptG AbD4_RS01680 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AbD4_RS01680 PF01676 Metalloenzyme superfamily AbD4_RS01685 PF00595 PDZ domain AbD4_RS01685 PF03572 Peptidase family S41 AbD4_RS01690 PF02954 Bacterial regulatory protein, Fis family AbD4_RS01690 PF00072 Response regulator receiver domain AbD4_RS01690 PF00158 Sigma-54 interaction domain AbD4_RS01695 PF00512 His Kinase A (phospho-acceptor) domain AbD4_RS01695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AbD4_RS01700 PF00072 Response regulator receiver domain AbD4_RS01700 PF00196 Bacterial regulatory proteins, luxR family AbD4_RS01705 PF00768 D-alanyl-D-alanine carboxypeptidase AbD4_RS01710 PF00291 Pyridoxal-phosphate dependent enzyme AbD4_RS01715 PF01842 ACT domain AbD4_RS01715 PF00742 Homoserine dehydrogenase AbD4_RS01715 PF03447 Homoserine dehydrogenase, NAD binding domain AbD4_RS01720 PF13098 Thioredoxin-like domain AbD4_RS01720 PF10411 Disulfide bond isomerase protein N-terminus AbD4_RS01725 PF00589 Phage integrase family AbD4_RS01725 PF02899 Phage integrase, N-terminal SAM-like domain AbD4_RS01735 PF07670 Nucleoside recognition AbD4_RS01735 PF02421 Ferrous iron transport protein B AbD4_RS01735 PF07664 Ferrous iron transport protein B C terminus AbD4_RS01745 PF08245 Mur ligase middle domain AbD4_RS01745 PF02875 Mur ligase family, glutamate ligase domain AbD4_RS01750 PF01098 Cell cycle protein AbD4_RS01755 PF00749 tRNA synthetases class I (E and Q), catalytic domain AbD4_RS01760 PF01258 Prokaryotic dksA/traR C4-type zinc finger AbD4_RS01765 PF00149 Calcineurin-like phosphoesterase AbD4_RS01770 PF00293 NUDIX domain AbD4_RS01775 PF01964 Radical SAM ThiC family AbD4_RS01775 PF13667 ThiC-associated domain AbD4_RS01790 PF00892 EamA-like transporter family AbD4_RS01795 PF02321 Outer membrane efflux protein AbD4_RS01800 PF01895 PhoU domain AbD4_RS01805 PF04362 Bacterial Fe(2+) trafficking AbD4_RS01810 PF14698 Argininosuccinate lyase C-terminal AbD4_RS01810 PF00206 Lyase AbD4_RS01815 PF07694 5TMR of 5TMR-LYT AbD4_RS01815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AbD4_RS01815 PF06580 Histidine kinase AbD4_RS01820 PF04397 LytTr DNA-binding domain AbD4_RS01820 PF00072 Response regulator receiver domain AbD4_RS01825 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AbD4_RS01825 PF03900 Porphobilinogen deaminase, C-terminal domain AbD4_RS01850 PF00816 H-NS histone family AbD4_RS01865 PF03958 Bacterial type II/III secretion system short domain AbD4_RS01865 PF00263 Bacterial type II and III secretion system protein AbD4_RS01870 PF12401 Protein of unknown function (DUF2662) AbD4_RS01870 PF00498 FHA domain AbD4_RS01875 PF13419 Haloacid dehalogenase-like hydrolase AbD4_RS01880 PF00425 chorismate binding enzyme AbD4_RS01880 PF04715 Anthranilate synthase component I, N terminal region AbD4_RS01905 PF03143 Elongation factor Tu C-terminal domain AbD4_RS01905 PF03144 Elongation factor Tu domain 2 AbD4_RS01905 PF00009 Elongation factor Tu GTP binding domain AbD4_RS01915 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AbD4_RS01920 PF02357 Transcription termination factor nusG AbD4_RS01920 PF00467 KOW motif AbD4_RS01925 PF03946 Ribosomal protein L11, N-terminal domain AbD4_RS01925 PF00298 Ribosomal protein L11, RNA binding domain AbD4_RS01930 PF00687 Ribosomal protein L1p/L10e family AbD4_RS01935 PF00466 Ribosomal protein L10 AbD4_RS01940 PF00542 Ribosomal protein L7/L12 C-terminal domain AbD4_RS01940 PF16320 Ribosomal protein L7/L12 dimerisation domain AbD4_RS01945 PF04565 RNA polymerase Rpb2, domain 3 AbD4_RS01945 PF10385 RNA polymerase beta subunit external 1 domain AbD4_RS01945 PF00562 RNA polymerase Rpb2, domain 6 AbD4_RS01945 PF04560 RNA polymerase Rpb2, domain 7 AbD4_RS01945 PF04563 RNA polymerase beta subunit AbD4_RS01945 PF04561 RNA polymerase Rpb2, domain 2 AbD4_RS01950 PF04998 RNA polymerase Rpb1, domain 5 AbD4_RS01950 PF04997 RNA polymerase Rpb1, domain 1 AbD4_RS01950 PF00623 RNA polymerase Rpb1, domain 2 AbD4_RS01950 PF04983 RNA polymerase Rpb1, domain 3 AbD4_RS01950 PF05000 RNA polymerase Rpb1, domain 4 AbD4_RS01975 PF03553 Na+/H+ antiporter family AbD4_RS01975 PF13726 Na+-H+ antiporter family AbD4_RS01990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AbD4_RS01990 PF00183 Hsp90 protein AbD4_RS02005 PF01323 DSBA-like thioredoxin domain AbD4_RS02015 PF00376 MerR family regulatory protein AbD4_RS02015 PF09278 MerR, DNA binding AbD4_RS02035 PF00108 Thiolase, N-terminal domain AbD4_RS02035 PF02803 Thiolase, C-terminal domain AbD4_RS02040 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AbD4_RS02040 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AbD4_RS02040 PF00378 Enoyl-CoA hydratase/isomerase AbD4_RS02065 PF01541 GIY-YIG catalytic domain AbD4_RS02065 PF02151 UvrB/uvrC motif AbD4_RS02065 PF08459 UvrC Helix-hairpin-helix N-terminal AbD4_RS02075 PF01066 CDP-alcohol phosphatidyltransferase AbD4_RS02080 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AbD4_RS02080 PF12833 Helix-turn-helix domain AbD4_RS02080 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AbD4_RS02080 PF02805 Metal binding domain of Ada AbD4_RS02105 PF13533 Biotin-lipoyl like AbD4_RS02110 PF03652 Holliday junction resolvase AbD4_RS02115 PF02622 Uncharacterized ACR, COG1678 AbD4_RS02120 PF02463 RecF/RecN/SMC N terminal domain AbD4_RS02130 PF06865 Pyrimidine/purine nucleoside phosphorylase AbD4_RS02135 PF08032 RNA 2'-O ribose methyltransferase substrate binding AbD4_RS02135 PF00588 SpoU rRNA Methylase family AbD4_RS02145 PF01121 Dephospho-CoA kinase AbD4_RS02155 PF00482 Type II secretion system (T2SS), protein F AbD4_RS02160 PF00437 Type II/IV secretion system protein AbD4_RS02160 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AbD4_RS02165 PF00121 Triosephosphate isomerase AbD4_RS02170 PF03840 Preprotein translocase SecG subunit AbD4_RS02190 PF02576 RimP N-terminal domain AbD4_RS02190 PF17384 RimP C-terminal SH3 domain AbD4_RS02195 PF00575 S1 RNA binding domain AbD4_RS02195 PF08529 NusA N-terminal domain AbD4_RS02195 PF13184 NusA-like KH domain AbD4_RS02200 PF08364 Bacterial translation initiation factor IF-2 associated region AbD4_RS02200 PF11987 Translation-initiation factor 2 AbD4_RS02200 PF00009 Elongation factor Tu GTP binding domain AbD4_RS02200 PF04760 Translation initiation factor IF-2, N-terminal region AbD4_RS02205 PF02033 Ribosome-binding factor A AbD4_RS02210 PF03334 Na+/H+ antiporter subunit AbD4_RS02215 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) AbD4_RS02220 PF01899 Na+/H+ ion antiporter subunit AbD4_RS02225 PF00361 Proton-conducting membrane transporter AbD4_RS02230 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AbD4_RS02235 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AbD4_RS02235 PF00361 Proton-conducting membrane transporter AbD4_RS02235 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AbD4_RS02235 PF13244 Domain of unknown function (DUF4040) AbD4_RS02250 PF01502 Phosphoribosyl-AMP cyclohydrolase AbD4_RS02260 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AbD4_RS02265 PF01494 FAD binding domain AbD4_RS02270 PF03109 ABC1 family AbD4_RS02280 PF01209 ubiE/COQ5 methyltransferase family AbD4_RS02290 PF03976 Polyphosphate kinase 2 (PPK2) AbD4_RS02300 PF17946 RecC C-terminal domain AbD4_RS02305 PF00580 UvrD/REP helicase N-terminal domain AbD4_RS02305 PF13361 UvrD-like helicase C-terminal domain AbD4_RS02305 PF12705 PD-(D/E)XK nuclease superfamily AbD4_RS02310 PF13538 UvrD-like helicase C-terminal domain AbD4_RS02315 PF00144 Beta-lactamase AbD4_RS02320 PF00312 Ribosomal protein S15 AbD4_RS02325 PF00575 S1 RNA binding domain AbD4_RS02325 PF03725 3' exoribonuclease family, domain 2 AbD4_RS02325 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AbD4_RS02325 PF00013 KH domain AbD4_RS02325 PF01138 3' exoribonuclease family, domain 1 AbD4_RS02330 PF01544 CorA-like Mg2+ transporter protein AbD4_RS02340 PF00226 DnaJ domain AbD4_RS02340 PF01556 DnaJ C terminal domain AbD4_RS02350 PF01430 Hsp33 protein AbD4_RS02355 PF00999 Sodium/hydrogen exchanger family AbD4_RS02355 PF02254 TrkA-N domain AbD4_RS02360 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AbD4_RS02360 PF18074 Primosomal protein N C-terminal domain AbD4_RS02360 PF17764 3′ DNA-binding domain (3′BD) AbD4_RS02360 PF00271 Helicase conserved C-terminal domain AbD4_RS02360 PF00270 DEAD/DEAH box helicase AbD4_RS02365 PF00482 Type II secretion system (T2SS), protein F AbD4_RS02370 PF07963 Prokaryotic N-terminal methylation motif AbD4_RS02370 PF08334 Type II secretion system (T2SS), protein G AbD4_RS02380 PF01588 Putative tRNA binding domain AbD4_RS02385 PF00795 Carbon-nitrogen hydrolase AbD4_RS02390 PF03471 Transporter associated domain AbD4_RS02390 PF00571 CBS domain AbD4_RS02395 PF01206 Sulfurtransferase TusA AbD4_RS02415 PF01177 Asp/Glu/Hydantoin racemase AbD4_RS02425 PF00762 Ferrochelatase AbD4_RS02430 PF00753 Metallo-beta-lactamase superfamily AbD4_RS02435 PF03884 DNA gyrase inhibitor YacG AbD4_RS02445 PF13247 4Fe-4S dicluster domain AbD4_RS02445 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AbD4_RS02445 PF07992 Pyridine nucleotide-disulphide oxidoreductase AbD4_RS02455 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AbD4_RS02470 PF01197 Ribosomal protein L31 AbD4_RS02475 PF03109 ABC1 family AbD4_RS02480 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AbD4_RS02480 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AbD4_RS02485 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AbD4_RS02485 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AbD4_RS02485 PF02770 Acyl-CoA dehydrogenase, middle domain AbD4_RS02490 PF01554 MatE AbD4_RS02500 PF04055 Radical SAM superfamily AbD4_RS02500 PF06969 HemN C-terminal domain AbD4_RS02505 PF00106 short chain dehydrogenase AbD4_RS02510 PF03466 LysR substrate binding domain AbD4_RS02510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS02525 PF13193 AMP-binding enzyme C-terminal domain AbD4_RS02525 PF00501 AMP-binding enzyme AbD4_RS02530 PF12111 Polyribonucleotide phosphorylase C terminal AbD4_RS02530 PF00575 S1 RNA binding domain AbD4_RS02530 PF10150 Ribonuclease E/G family AbD4_RS02535 PF00849 RNA pseudouridylate synthase AbD4_RS02535 PF01479 S4 domain AbD4_RS02540 PF13419 Haloacid dehalogenase-like hydrolase AbD4_RS02545 PF13280 WYL domain AbD4_RS02545 PF08279 HTH domain AbD4_RS02550 PF02798 Glutathione S-transferase, N-terminal domain AbD4_RS02560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS02560 PF03466 LysR substrate binding domain AbD4_RS02565 PF12706 Beta-lactamase superfamily domain AbD4_RS02570 PF00141 Peroxidase AbD4_RS02575 PF02896 PEP-utilising enzyme, TIM barrel domain AbD4_RS02575 PF05524 PEP-utilising enzyme, N-terminal AbD4_RS02575 PF00391 PEP-utilising enzyme, mobile domain AbD4_RS02575 PF01590 GAF domain AbD4_RS02580 PF00293 NUDIX domain AbD4_RS02590 PF03466 LysR substrate binding domain AbD4_RS02590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS02600 PF00330 Aconitase family (aconitate hydratase) AbD4_RS02605 PF00694 Aconitase C-terminal domain AbD4_RS02615 PF00180 Isocitrate/isopropylmalate dehydrogenase AbD4_RS02630 PF01176 Translation initiation factor 1A / IF-1 AbD4_RS02640 PF01416 tRNA pseudouridine synthase AbD4_RS02660 PF01118 Semialdehyde dehydrogenase, NAD binding domain AbD4_RS02660 PF02774 Semialdehyde dehydrogenase, dimerisation domain AbD4_RS02670 PF00375 Sodium:dicarboxylate symporter family AbD4_RS02680 PF03279 Bacterial lipid A biosynthesis acyltransferase AbD4_RS02685 PF01810 LysE type translocator AbD4_RS02695 PF16326 ABC transporter C-terminal domain AbD4_RS02695 PF12848 ABC transporter AbD4_RS02695 PF00005 ABC transporter AbD4_RS02700 PF04102 SlyX AbD4_RS02705 PF08240 Alcohol dehydrogenase GroES-like domain AbD4_RS02705 PF00107 Zinc-binding dehydrogenase AbD4_RS02710 PF01638 HxlR-like helix-turn-helix AbD4_RS02720 PF08272 Topoisomerase I zinc-ribbon-like AbD4_RS02720 PF01131 DNA topoisomerase AbD4_RS02720 PF01751 Toprim domain AbD4_RS02720 PF01396 Topoisomerase DNA binding C4 zinc finger AbD4_RS02735 PF13361 UvrD-like helicase C-terminal domain AbD4_RS02735 PF00580 UvrD/REP helicase N-terminal domain AbD4_RS02740 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) AbD4_RS02760 PF02254 TrkA-N domain AbD4_RS02760 PF00999 Sodium/hydrogen exchanger family AbD4_RS02765 PF00471 Ribosomal protein L33 AbD4_RS02770 PF00830 Ribosomal L28 family AbD4_RS02775 PF00171 Aldehyde dehydrogenase family AbD4_RS02785 PF01842 ACT domain AbD4_RS02785 PF00551 Formyl transferase AbD4_RS02795 PF01618 MotA/TolQ/ExbB proton channel family AbD4_RS02805 PF01625 Peptide methionine sulfoxide reductase AbD4_RS02815 PF00186 Dihydrofolate reductase AbD4_RS02820 PF00303 Thymidylate synthase AbD4_RS02835 PF01790 Prolipoprotein diacylglyceryl transferase AbD4_RS02855 PF00902 Sec-independent protein translocase protein (TatC) AbD4_RS02860 PF02416 mttA/Hcf106 family AbD4_RS02865 PF02416 mttA/Hcf106 family AbD4_RS02875 PF01725 Ham1 family AbD4_RS02890 PF00561 alpha/beta hydrolase fold AbD4_RS02890 PF07021 Methionine biosynthesis protein MetW AbD4_RS02895 PF00561 alpha/beta hydrolase fold AbD4_RS02900 PF08502 LeuA allosteric (dimerisation) domain AbD4_RS02900 PF00682 HMGL-like AbD4_RS02905 PF18331 PKHD-type hydroxylase C-terminal domain AbD4_RS02905 PF13640 2OG-Fe(II) oxygenase superfamily AbD4_RS02910 PF07715 TonB-dependent Receptor Plug Domain AbD4_RS02910 PF00593 TonB dependent receptor AbD4_RS02915 PF05698 Bacterial trigger factor protein (TF) C-terminus AbD4_RS02915 PF05697 Bacterial trigger factor protein (TF) AbD4_RS02915 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AbD4_RS02920 PF00574 Clp protease AbD4_RS02925 PF07724 AAA domain (Cdc48 subfamily) AbD4_RS02925 PF10431 C-terminal, D2-small domain, of ClpB protein AbD4_RS02925 PF06689 ClpX C4-type zinc finger AbD4_RS02940 PF05681 Fumarate hydratase (Fumerase) AbD4_RS02940 PF05683 Fumarase C-terminus AbD4_RS02945 PF01515 Phosphate acetyl/butaryl transferase AbD4_RS02945 PF07085 DRTGG domain AbD4_RS02950 PF00871 Acetokinase family AbD4_RS02955 PF00920 Dehydratase family AbD4_RS02960 PF01081 KDPG and KHG aldolase AbD4_RS02965 PF02447 GntP family permease AbD4_RS02970 PF01202 Shikimate kinase AbD4_RS02975 PF00171 Aldehyde dehydrogenase family AbD4_RS02980 PF00171 Aldehyde dehydrogenase family AbD4_RS02985 PF00561 alpha/beta hydrolase fold AbD4_RS02995 PF00933 Glycosyl hydrolase family 3 N terminal domain AbD4_RS03000 PF11818 C-terminal domain of tail specific protease (DUF3340) AbD4_RS03000 PF00595 PDZ domain AbD4_RS03000 PF03572 Peptidase family S41 AbD4_RS03000 PF17804 Tail specific protease N-terminal domain AbD4_RS03005 PF13439 Glycosyltransferase Family 4 AbD4_RS03005 PF00534 Glycosyl transferases group 1 AbD4_RS03010 PF01569 PAP2 superfamily AbD4_RS03015 PF04384 Iron-sulphur cluster assembly AbD4_RS03020 PF00334 Nucleoside diphosphate kinase AbD4_RS03025 PF04055 Radical SAM superfamily AbD4_RS03035 PF13464 Domain of unknown function (DUF4115) AbD4_RS03040 PF04551 GcpE protein AbD4_RS03045 PF03129 Anticodon binding domain AbD4_RS03045 PF13393 Histidyl-tRNA synthetase AbD4_RS03055 PF13360 PQQ-like domain AbD4_RS03060 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AbD4_RS03060 PF01926 50S ribosome-binding GTPase AbD4_RS03070 PF02556 Preprotein translocase subunit SecB AbD4_RS03075 PF00462 Glutaredoxin AbD4_RS03085 PF03193 RsgA GTPase AbD4_RS03090 PF00929 Exonuclease AbD4_RS03105 PF02321 Outer membrane efflux protein AbD4_RS03110 PF02687 FtsX-like permease family AbD4_RS03110 PF12704 MacB-like periplasmic core domain AbD4_RS03110 PF00005 ABC transporter AbD4_RS03120 PF13007 Transposase C of IS166 homeodomain AbD4_RS03120 PF03050 Transposase IS66 family AbD4_RS03120 PF13005 zinc-finger binding domain of transposase IS66 AbD4_RS03120 PF13817 IS66 C-terminal element AbD4_RS03150 PF09334 tRNA synthetases class I (M) AbD4_RS03150 PF00133 tRNA synthetases class I (I, L, M and V) AbD4_RS03150 PF08264 Anticodon-binding domain of tRNA AbD4_RS03150 PF13603 Leucyl-tRNA synthetase, Domain 2 AbD4_RS03160 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AbD4_RS03160 PF00205 Thiamine pyrophosphate enzyme, central domain AbD4_RS03160 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AbD4_RS03165 PF10369 Small subunit of acetolactate synthase AbD4_RS03170 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AbD4_RS03170 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AbD4_RS03175 PF00990 Diguanylate cyclase, GGDEF domain AbD4_RS03175 PF00563 EAL domain AbD4_RS03175 PF03707 Bacterial signalling protein N terminal repeat AbD4_RS03220 PF03144 Elongation factor Tu domain 2 AbD4_RS03220 PF16658 Class II release factor RF3, C-terminal domain AbD4_RS03220 PF00009 Elongation factor Tu GTP binding domain AbD4_RS03235 PF01026 TatD related DNase AbD4_RS03240 PF00330 Aconitase family (aconitate hydratase) AbD4_RS03240 PF00694 Aconitase C-terminal domain AbD4_RS03250 PF00899 ThiF family AbD4_RS03260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS03260 PF03466 LysR substrate binding domain AbD4_RS03270 PF01207 Dihydrouridine synthase (Dus) AbD4_RS03275 PF00589 Phage integrase family AbD4_RS03305 PF13007 Transposase C of IS166 homeodomain AbD4_RS03305 PF13005 zinc-finger binding domain of transposase IS66 AbD4_RS03305 PF13817 IS66 C-terminal element AbD4_RS03305 PF03050 Transposase IS66 family AbD4_RS03370 PF04945 YHS domain AbD4_RS03390 PF13817 IS66 C-terminal element AbD4_RS03390 PF13007 Transposase C of IS166 homeodomain AbD4_RS03390 PF13005 zinc-finger binding domain of transposase IS66 AbD4_RS03390 PF03050 Transposase IS66 family AbD4_RS03400 PF00486 Transcriptional regulatory protein, C terminal AbD4_RS03400 PF00072 Response regulator receiver domain AbD4_RS03410 PF07732 Multicopper oxidase AbD4_RS03410 PF07731 Multicopper oxidase AbD4_RS03410 PF00394 Multicopper oxidase AbD4_RS03420 PF13411 MerR HTH family regulatory protein AbD4_RS03425 PF01545 Cation efflux family AbD4_RS03435 PF02421 Ferrous iron transport protein B AbD4_RS03435 PF07670 Nucleoside recognition AbD4_RS03435 PF07664 Ferrous iron transport protein B C terminus AbD4_RS03450 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AbD4_RS03455 PF00873 AcrB/AcrD/AcrF family AbD4_RS03465 PF03960 ArsC family AbD4_RS03470 PF01022 Bacterial regulatory protein, arsR family AbD4_RS03480 PF01758 Sodium Bile acid symporter family AbD4_RS03495 PF13817 IS66 C-terminal element AbD4_RS03495 PF03050 Transposase IS66 family AbD4_RS03495 PF13005 zinc-finger binding domain of transposase IS66 AbD4_RS03495 PF13007 Transposase C of IS166 homeodomain AbD4_RS03515 PF07690 Major Facilitator Superfamily AbD4_RS03525 PF00892 EamA-like transporter family AbD4_RS03530 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AbD4_RS03530 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AbD4_RS03535 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AbD4_RS03540 PF02233 NAD(P) transhydrogenase beta subunit AbD4_RS03545 PF00106 short chain dehydrogenase AbD4_RS03555 PF01261 Xylose isomerase-like TIM barrel AbD4_RS03560 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AbD4_RS03560 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AbD4_RS03565 PF00378 Enoyl-CoA hydratase/isomerase AbD4_RS03570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AbD4_RS03570 PF00512 His Kinase A (phospho-acceptor) domain AbD4_RS03570 PF01627 Hpt domain AbD4_RS03570 PF00072 Response regulator receiver domain AbD4_RS03570 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AbD4_RS03570 PF00672 HAMP domain AbD4_RS03575 PF00291 Pyridoxal-phosphate dependent enzyme AbD4_RS03585 PF05958 tRNA (Uracil-5-)-methyltransferase AbD4_RS03590 PF04607 Region found in RelA / SpoT proteins AbD4_RS03590 PF13291 ACT domain AbD4_RS03590 PF02824 TGS domain AbD4_RS03600 PF03819 MazG nucleotide pyrophosphohydrolase domain AbD4_RS03610 PF01743 Poly A polymerase head domain AbD4_RS03610 PF12626 Polymerase A arginine-rich C-terminus AbD4_RS03610 PF12627 Probable RNA and SrmB- binding site of polymerase A AbD4_RS03615 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AbD4_RS03620 PF02548 Ketopantoate hydroxymethyltransferase AbD4_RS03625 PF02569 Pantoate-beta-alanine ligase AbD4_RS03630 PF03668 P-loop ATPase protein family AbD4_RS03635 PF00381 PTS HPr component phosphorylation site AbD4_RS03640 PF04751 Protein of unknown function (DUF615) AbD4_RS03645 PF13193 AMP-binding enzyme C-terminal domain AbD4_RS03645 PF00501 AMP-binding enzyme AbD4_RS03650 PF02824 TGS domain AbD4_RS03650 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AbD4_RS03650 PF03129 Anticodon binding domain AbD4_RS03650 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AbD4_RS03655 PF00707 Translation initiation factor IF-3, C-terminal domain AbD4_RS03655 PF05198 Translation initiation factor IF-3, N-terminal domain AbD4_RS03660 PF00043 Glutathione S-transferase, C-terminal domain AbD4_RS03660 PF02798 Glutathione S-transferase, N-terminal domain AbD4_RS03665 PF09335 SNARE associated Golgi protein AbD4_RS03670 PF07690 Major Facilitator Superfamily AbD4_RS03675 PF01632 Ribosomal protein L35 AbD4_RS03680 PF00453 Ribosomal protein L20 AbD4_RS03700 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AbD4_RS03700 PF01409 tRNA synthetases class II core domain (F) AbD4_RS03705 PF03484 tRNA synthetase B5 domain AbD4_RS03705 PF03483 B3/4 domain AbD4_RS03705 PF01588 Putative tRNA binding domain AbD4_RS03705 PF03147 Ferredoxin-fold anticodon binding domain AbD4_RS03705 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AbD4_RS03710 PF00216 Bacterial DNA-binding protein AbD4_RS03725 PF07498 Rho termination factor, N-terminal domain AbD4_RS03725 PF07497 Rho termination factor, RNA-binding domain AbD4_RS03725 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AbD4_RS03730 PF00085 Thioredoxin AbD4_RS03735 PF02541 Ppx/GppA phosphatase family AbD4_RS03740 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AbD4_RS03745 PF01171 PP-loop family AbD4_RS03745 PF09179 TilS substrate binding domain AbD4_RS03745 PF11734 TilS substrate C-terminal domain AbD4_RS03750 PF03807 NADP oxidoreductase coenzyme F420-dependent AbD4_RS03750 PF14748 Pyrroline-5-carboxylate reductase dimerisation AbD4_RS03755 PF02325 YGGT family AbD4_RS03760 PF01612 3'-5' exonuclease AbD4_RS03760 PF00476 DNA polymerase family A AbD4_RS03760 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AbD4_RS03760 PF01367 5'-3' exonuclease, C-terminal SAM fold AbD4_RS03780 PF00437 Type II/IV secretion system protein AbD4_RS03785 PF02566 OsmC-like protein AbD4_RS03790 PF01047 MarR family AbD4_RS03800 PF00795 Carbon-nitrogen hydrolase AbD4_RS03845 PF00309 Sigma-54 factor, Activator interacting domain (AID) AbD4_RS03845 PF04963 Sigma-54 factor, core binding domain AbD4_RS03845 PF04552 Sigma-54, DNA binding domain AbD4_RS03850 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AbD4_RS03855 PF01722 BolA-like protein AbD4_RS03860 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AbD4_RS03865 PF01634 ATP phosphoribosyltransferase AbD4_RS03870 PF00815 Histidinol dehydrogenase AbD4_RS03875 PF00155 Aminotransferase class I and II AbD4_RS03880 PF04715 Anthranilate synthase component I, N terminal region AbD4_RS03880 PF00425 chorismate binding enzyme AbD4_RS03920 PF00293 NUDIX domain AbD4_RS03925 PF00132 Bacterial transferase hexapeptide (six repeats) AbD4_RS03930 PF00814 Glycoprotease family AbD4_RS03935 PF04445 Putative SAM-dependent methyltransferase AbD4_RS03945 PF00756 Putative esterase AbD4_RS03955 PF00834 Ribulose-phosphate 3 epimerase family AbD4_RS03970 PF07731 Multicopper oxidase AbD4_RS03970 PF00394 Multicopper oxidase AbD4_RS03970 PF07732 Multicopper oxidase AbD4_RS03985 PF00893 Small Multidrug Resistance protein AbD4_RS03990 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AbD4_RS03990 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AbD4_RS03995 PF01960 ArgJ family AbD4_RS04000 PF02445 Quinolinate synthetase A protein AbD4_RS04025 PF00962 Adenosine/AMP deaminase AbD4_RS04030 PF00107 Zinc-binding dehydrogenase AbD4_RS04030 PF08240 Alcohol dehydrogenase GroES-like domain AbD4_RS04035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS04035 PF03466 LysR substrate binding domain AbD4_RS04040 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AbD4_RS04040 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AbD4_RS04040 PF02770 Acyl-CoA dehydrogenase, middle domain AbD4_RS04045 PF07690 Major Facilitator Superfamily AbD4_RS04050 PF02515 CoA-transferase family III AbD4_RS04060 PF00890 FAD binding domain AbD4_RS04060 PF14537 Cytochrome c3 AbD4_RS04065 PF03466 LysR substrate binding domain AbD4_RS04065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS04075 PF07690 Major Facilitator Superfamily AbD4_RS04080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS04080 PF03466 LysR substrate binding domain AbD4_RS04090 PF07687 Peptidase dimerisation domain AbD4_RS04090 PF01546 Peptidase family M20/M25/M40 AbD4_RS04095 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AbD4_RS04095 PF12833 Helix-turn-helix domain AbD4_RS04105 PF01810 LysE type translocator AbD4_RS04110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS04110 PF03466 LysR substrate binding domain AbD4_RS04120 PF01717 Cobalamin-independent synthase, Catalytic domain AbD4_RS04120 PF08267 Cobalamin-independent synthase, N-terminal domain AbD4_RS04125 PF01613 Flavin reductase like domain AbD4_RS04130 PF00440 Bacterial regulatory proteins, tetR family AbD4_RS04130 PF16925 Tetracyclin repressor-like, C-terminal domain AbD4_RS04140 PF17074 Darcynin, domain of unknown function AbD4_RS04150 PF02567 Phenazine biosynthesis-like protein AbD4_RS04155 PF13817 IS66 C-terminal element AbD4_RS04155 PF13007 Transposase C of IS166 homeodomain AbD4_RS04155 PF03050 Transposase IS66 family AbD4_RS04155 PF13005 zinc-finger binding domain of transposase IS66 AbD4_RS04180 PF00268 Ribonucleotide reductase, small chain AbD4_RS04190 PF02867 Ribonucleotide reductase, barrel domain AbD4_RS04190 PF00317 Ribonucleotide reductase, all-alpha domain AbD4_RS04190 PF03477 ATP cone domain AbD4_RS04200 PF00072 Response regulator receiver domain AbD4_RS04200 PF00486 Transcriptional regulatory protein, C terminal AbD4_RS04205 PF00672 HAMP domain AbD4_RS04205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AbD4_RS04205 PF00512 His Kinase A (phospho-acceptor) domain AbD4_RS04215 PF17151 Periplasmic sensor domain AbD4_RS04215 PF00990 Diguanylate cyclase, GGDEF domain AbD4_RS04220 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AbD4_RS04225 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AbD4_RS04230 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AbD4_RS04230 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AbD4_RS04240 PF10531 SLBB domain AbD4_RS04240 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AbD4_RS04240 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AbD4_RS04245 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AbD4_RS04245 PF00384 Molybdopterin oxidoreductase AbD4_RS04245 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AbD4_RS04250 PF00146 NADH dehydrogenase AbD4_RS04255 PF12838 4Fe-4S dicluster domain AbD4_RS04260 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AbD4_RS04265 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AbD4_RS04270 PF00361 Proton-conducting membrane transporter AbD4_RS04270 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AbD4_RS04275 PF00361 Proton-conducting membrane transporter AbD4_RS04280 PF00361 Proton-conducting membrane transporter AbD4_RS04290 PF00313 'Cold-shock' DNA-binding domain AbD4_RS04295 PF03466 LysR substrate binding domain AbD4_RS04295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS04300 PF00970 Oxidoreductase FAD-binding domain AbD4_RS04300 PF00175 Oxidoreductase NAD-binding domain AbD4_RS04315 PF05552 Conserved TM helix AbD4_RS04330 PF00291 Pyridoxal-phosphate dependent enzyme AbD4_RS04335 PF13533 Biotin-lipoyl like AbD4_RS04360 PF09334 tRNA synthetases class I (M) AbD4_RS04360 PF01588 Putative tRNA binding domain AbD4_RS04370 PF10609 NUBPL iron-transfer P-loop NTPase AbD4_RS04380 PF01048 Phosphorylase superfamily AbD4_RS04395 PF00692 dUTPase AbD4_RS04425 PF01207 Dihydrouridine synthase (Dus) AbD4_RS04435 PF00448 SRP54-type protein, GTPase domain AbD4_RS04435 PF02881 SRP54-type protein, helical bundle domain AbD4_RS04435 PF02978 Signal peptide binding domain AbD4_RS04440 PF03309 Type III pantothenate kinase AbD4_RS04450 PF01925 Sulfite exporter TauE/SafE AbD4_RS04460 PF02463 RecF/RecN/SMC N terminal domain AbD4_RS04460 PF06470 SMC proteins Flexible Hinge Domain AbD4_RS04470 PF00533 BRCA1 C Terminus (BRCT) domain AbD4_RS04470 PF01653 NAD-dependent DNA ligase adenylation domain AbD4_RS04470 PF03120 NAD-dependent DNA ligase OB-fold domain AbD4_RS04470 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AbD4_RS04470 PF12826 Helix-hairpin-helix motif AbD4_RS04475 PF00210 Ferritin-like domain AbD4_RS04480 PF07690 Major Facilitator Superfamily AbD4_RS04485 PF00982 Glycosyltransferase family 20 AbD4_RS04490 PF02358 Trehalose-phosphatase AbD4_RS04495 PF12697 Alpha/beta hydrolase family AbD4_RS04495 PF08241 Methyltransferase domain AbD4_RS04500 PF00202 Aminotransferase class-III AbD4_RS04500 PF06968 Biotin and Thiamin Synthesis associated domain AbD4_RS04500 PF04055 Radical SAM superfamily AbD4_RS04505 PF00155 Aminotransferase class I and II AbD4_RS04520 PF01479 S4 domain AbD4_RS04520 PF00849 RNA pseudouridylate synthase AbD4_RS04525 PF04079 Segregation and condensation complex subunit ScpB AbD4_RS04530 PF02616 Segregation and condensation protein ScpA AbD4_RS04535 PF01300 Telomere recombination AbD4_RS04540 PF04315 Elongation factor P hydroxylase AbD4_RS04545 PF02620 Large ribosomal RNA subunit accumulation protein YceD AbD4_RS04550 PF01783 Ribosomal L32p protein family AbD4_RS04555 PF00698 Acyl transferase domain AbD4_RS04565 PF00550 Phosphopantetheine attachment site AbD4_RS04570 PF04972 BON domain AbD4_RS04570 PF01476 LysM domain AbD4_RS04575 PF08543 Phosphomethylpyrimidine kinase AbD4_RS04575 PF03070 TENA/THI-4/PQQC family AbD4_RS04575 PF02581 Thiamine monophosphate synthase AbD4_RS04585 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AbD4_RS04600 PF02261 Aspartate decarboxylase AbD4_RS04605 PF01195 Peptidyl-tRNA hydrolase AbD4_RS04610 PF01386 Ribosomal L25p family AbD4_RS04615 PF14572 Phosphoribosyl synthetase-associated domain AbD4_RS04615 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AbD4_RS04640 PF08544 GHMP kinases C terminal AbD4_RS04640 PF00288 GHMP kinases N terminal domain AbD4_RS04645 PF03550 Outer membrane lipoprotein LolB AbD4_RS04655 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AbD4_RS04655 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AbD4_RS04655 PF01488 Shikimate / quinate 5-dehydrogenase AbD4_RS04660 PF01807 CHC2 zinc finger AbD4_RS04660 PF10410 DnaB-helicase binding domain of primase AbD4_RS04660 PF08278 DNA primase DnaG DnaB-binding AbD4_RS04660 PF08275 DNA primase catalytic core, N-terminal domain AbD4_RS04665 PF13525 Outer membrane lipoprotein AbD4_RS04670 PF00849 RNA pseudouridylate synthase AbD4_RS04670 PF01479 S4 domain AbD4_RS04675 PF02578 Multi-copper polyphenol oxidoreductase laccase AbD4_RS04680 PF03358 NADPH-dependent FMN reductase AbD4_RS04685 PF01668 SmpB protein AbD4_RS04690 PF01467 Cytidylyltransferase-like AbD4_RS04695 PF00037 4Fe-4S binding domain AbD4_RS04715 PF03466 LysR substrate binding domain AbD4_RS04715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS04720 PF00180 Isocitrate/isopropylmalate dehydrogenase AbD4_RS04725 PF02028 BCCT, betaine/carnitine/choline family transporter AbD4_RS04730 PF07859 alpha/beta hydrolase fold AbD4_RS04735 PF00355 Rieske [2Fe-2S] domain AbD4_RS04735 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AbD4_RS04740 PF00171 Aldehyde dehydrogenase family AbD4_RS04745 PF00175 Oxidoreductase NAD-binding domain AbD4_RS04745 PF00111 2Fe-2S iron-sulfur cluster binding domain AbD4_RS04745 PF00970 Oxidoreductase FAD-binding domain AbD4_RS04760 PF00795 Carbon-nitrogen hydrolase AbD4_RS04760 PF02540 NAD synthase AbD4_RS04770 PF02678 Pirin AbD4_RS04770 PF05726 Pirin C-terminal cupin domain AbD4_RS04775 PF03653 Uncharacterised protein family (UPF0093) AbD4_RS04780 PF00109 Beta-ketoacyl synthase, N-terminal domain AbD4_RS04780 PF02801 Beta-ketoacyl synthase, C-terminal domain AbD4_RS04790 PF00164 Ribosomal protein S12/S23 AbD4_RS04795 PF00177 Ribosomal protein S7p/S5e AbD4_RS04800 PF00679 Elongation factor G C-terminus AbD4_RS04800 PF14492 Elongation Factor G, domain II AbD4_RS04800 PF03764 Elongation factor G, domain IV AbD4_RS04800 PF00009 Elongation factor Tu GTP binding domain AbD4_RS04800 PF03144 Elongation factor Tu domain 2 AbD4_RS04805 PF03143 Elongation factor Tu C-terminal domain AbD4_RS04805 PF03144 Elongation factor Tu domain 2 AbD4_RS04805 PF00009 Elongation factor Tu GTP binding domain AbD4_RS04820 PF00583 Acetyltransferase (GNAT) family AbD4_RS04825 PF04377 Arginine-tRNA-protein transferase, C terminus AbD4_RS04825 PF04376 Arginine-tRNA-protein transferase, N terminus AbD4_RS04830 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AbD4_RS04835 PF07992 Pyridine nucleotide-disulphide oxidoreductase AbD4_RS04840 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AbD4_RS04840 PF17854 FtsK alpha domain AbD4_RS04840 PF09397 Ftsk gamma domain AbD4_RS04840 PF01580 FtsK/SpoIIIE family AbD4_RS04845 PF01810 LysE type translocator AbD4_RS04865 PF13007 Transposase C of IS166 homeodomain AbD4_RS04865 PF13005 zinc-finger binding domain of transposase IS66 AbD4_RS04865 PF03050 Transposase IS66 family AbD4_RS04865 PF13817 IS66 C-terminal element AbD4_RS04875 PF03776 Septum formation topological specificity factor MinE AbD4_RS04880 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AbD4_RS04885 PF03775 Septum formation inhibitor MinC, C-terminal domain AbD4_RS04895 PF01553 Acyltransferase AbD4_RS04900 PF13488 Glycine zipper AbD4_RS04900 PF00691 OmpA family AbD4_RS04905 PF00580 UvrD/REP helicase N-terminal domain AbD4_RS04905 PF13361 UvrD-like helicase C-terminal domain AbD4_RS04910 PF00692 dUTPase AbD4_RS04915 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AbD4_RS04915 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AbD4_RS04915 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AbD4_RS04915 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AbD4_RS04920 PF00696 Amino acid kinase family AbD4_RS04930 PF13230 Glutamine amidotransferases class-II AbD4_RS04935 PF01814 Hemerythrin HHE cation binding domain AbD4_RS04945 PF03658 RnfH family Ubiquitin AbD4_RS04950 PF04355 SmpA / OmlA family AbD4_RS04955 PF01475 Ferric uptake regulator family AbD4_RS04960 PF00437 Type II/IV secretion system protein AbD4_RS04965 PF00437 Type II/IV secretion system protein AbD4_RS04970 PF01168 Alanine racemase, N-terminal domain AbD4_RS04980 PF12320 Type 5 capsule protein repressor C-terminal domain AbD4_RS04980 PF00149 Calcineurin-like phosphoesterase AbD4_RS05000 PF01370 NAD dependent epimerase/dehydratase family AbD4_RS05000 PF08338 Domain of unknown function (DUF1731) AbD4_RS05005 PF01266 FAD dependent oxidoreductase AbD4_RS05010 PF00490 Delta-aminolevulinic acid dehydratase AbD4_RS05015 PF03061 Thioesterase superfamily AbD4_RS05020 PF13533 Biotin-lipoyl like AbD4_RS05025 PF07690 Major Facilitator Superfamily AbD4_RS05085 PF02384 N-6 DNA Methylase AbD4_RS05085 PF12161 HsdM N-terminal domain AbD4_RS05095 PF04851 Type III restriction enzyme, res subunit AbD4_RS05095 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AbD4_RS05095 PF08463 EcoEI R protein C-terminal AbD4_RS05095 PF00271 Helicase conserved C-terminal domain AbD4_RS05105 PF00083 Sugar (and other) transporter AbD4_RS05110 PF00701 Dihydrodipicolinate synthetase family AbD4_RS05120 PF04542 Sigma-70 region 2 AbD4_RS05120 PF08281 Sigma-70, region 4 AbD4_RS05130 PF07715 TonB-dependent Receptor Plug Domain AbD4_RS05130 PF00593 TonB dependent receptor AbD4_RS05140 PF04575 Protein of unknown function (DUF560) AbD4_RS05150 PF01126 Heme oxygenase AbD4_RS05175 PF13520 Amino acid permease AbD4_RS05180 PF02574 Homocysteine S-methyltransferase AbD4_RS05190 PF06039 Malate:quinone oxidoreductase (Mqo) AbD4_RS05195 PF00732 GMC oxidoreductase AbD4_RS05195 PF05199 GMC oxidoreductase AbD4_RS05200 PF00171 Aldehyde dehydrogenase family AbD4_RS05205 PF13977 BetI-type transcriptional repressor, C-terminal AbD4_RS05205 PF00440 Bacterial regulatory proteins, tetR family AbD4_RS05210 PF02028 BCCT, betaine/carnitine/choline family transporter AbD4_RS05215 PF02028 BCCT, betaine/carnitine/choline family transporter AbD4_RS05225 PF03061 Thioesterase superfamily AbD4_RS05235 PF02492 CobW/HypB/UreG, nucleotide-binding domain AbD4_RS05235 PF07683 Cobalamin synthesis protein cobW C-terminal domain AbD4_RS05240 PF00375 Sodium:dicarboxylate symporter family AbD4_RS05245 PF07152 YaeQ protein AbD4_RS05250 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AbD4_RS05255 PF14883 Hypothetical glycosyl hydrolase family 13 AbD4_RS05255 PF01522 Polysaccharide deacetylase AbD4_RS05260 PF00535 Glycosyl transferase family 2 AbD4_RS05270 PF00378 Enoyl-CoA hydratase/isomerase AbD4_RS05285 PF01614 Bacterial transcriptional regulator AbD4_RS05285 PF09339 IclR helix-turn-helix domain AbD4_RS05290 PF00355 Rieske [2Fe-2S] domain AbD4_RS05300 PF00355 Rieske [2Fe-2S] domain AbD4_RS05310 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AbD4_RS05315 PF07992 Pyridine nucleotide-disulphide oxidoreductase AbD4_RS05315 PF14759 Reductase C-terminal AbD4_RS05320 PF07690 Major Facilitator Superfamily AbD4_RS05330 PF12697 Alpha/beta hydrolase family AbD4_RS05340 PF01958 Domain of unknown function DUF108 AbD4_RS05340 PF03447 Homoserine dehydrogenase, NAD binding domain AbD4_RS05345 PF00171 Aldehyde dehydrogenase family AbD4_RS05350 PF00205 Thiamine pyrophosphate enzyme, central domain AbD4_RS05350 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AbD4_RS05350 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AbD4_RS05360 PF07690 Major Facilitator Superfamily AbD4_RS05365 PF01327 Polypeptide deformylase AbD4_RS05370 PF04960 Glutaminase AbD4_RS05375 PF02311 AraC-like ligand binding domain AbD4_RS05375 PF12833 Helix-turn-helix domain AbD4_RS05380 PF07690 Major Facilitator Superfamily AbD4_RS05385 PF01263 Aldose 1-epimerase AbD4_RS05395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS05395 PF03466 LysR substrate binding domain AbD4_RS05405 PF07690 Major Facilitator Superfamily AbD4_RS05410 PF00456 Transketolase, thiamine diphosphate binding domain AbD4_RS05415 PF02779 Transketolase, pyrimidine binding domain AbD4_RS05415 PF02780 Transketolase, C-terminal domain AbD4_RS05420 PF02310 B12 binding domain AbD4_RS05420 PF02607 B12 binding domain AbD4_RS05420 PF02965 Vitamin B12 dependent methionine synthase, activation domain AbD4_RS05420 PF00809 Pterin binding enzyme AbD4_RS05420 PF02574 Homocysteine S-methyltransferase AbD4_RS05425 PF01384 Phosphate transporter family AbD4_RS05430 PF00291 Pyridoxal-phosphate dependent enzyme AbD4_RS05445 PF03781 Sulfatase-modifying factor enzyme 1 AbD4_RS05450 PF00884 Sulfatase AbD4_RS05460 PF01521 Iron-sulphur cluster biosynthesis AbD4_RS05460 PF01106 NifU-like domain AbD4_RS05465 PF07715 TonB-dependent Receptor Plug Domain AbD4_RS05465 PF00593 TonB dependent receptor AbD4_RS05475 PF00561 alpha/beta hydrolase fold AbD4_RS05480 PF00484 Carbonic anhydrase AbD4_RS05485 PF13472 GDSL-like Lipase/Acylhydrolase family AbD4_RS05490 PF00005 ABC transporter AbD4_RS05500 PF01694 Rhomboid family AbD4_RS05505 PF00912 Transglycosylase AbD4_RS05510 PF02503 Polyphosphate kinase middle domain AbD4_RS05510 PF13090 Polyphosphate kinase C-terminal domain 2 AbD4_RS05510 PF17941 Polyphosphate kinase C-terminal domain 1 AbD4_RS05510 PF13089 Polyphosphate kinase N-terminal domain AbD4_RS05525 PF03466 LysR substrate binding domain AbD4_RS05525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS05530 PF00561 alpha/beta hydrolase fold AbD4_RS05535 PF07992 Pyridine nucleotide-disulphide oxidoreductase AbD4_RS05535 PF18113 Rubredoxin binding C-terminal domain AbD4_RS05540 PF00301 Rubredoxin AbD4_RS05555 PF00152 tRNA synthetases class II (D, K and N) AbD4_RS05555 PF01336 OB-fold nucleic acid binding domain AbD4_RS05560 PF14052 Capsule assembly protein Wzi AbD4_RS05570 PF01507 Phosphoadenosine phosphosulfate reductase family AbD4_RS05575 PF00009 Elongation factor Tu GTP binding domain AbD4_RS05590 PF03600 Citrate transporter AbD4_RS05595 PF00571 CBS domain AbD4_RS05595 PF03471 Transporter associated domain AbD4_RS05595 PF01595 Cyclin M transmembrane N-terminal domain AbD4_RS05600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS05600 PF03466 LysR substrate binding domain AbD4_RS05605 PF00463 Isocitrate lyase family AbD4_RS05620 PF01774 UreD urease accessory protein AbD4_RS05625 PF00547 Urease, gamma subunit AbD4_RS05630 PF00699 Urease beta subunit AbD4_RS05635 PF01979 Amidohydrolase family AbD4_RS05635 PF00449 Urease alpha-subunit, N-terminal domain AbD4_RS05640 PF05194 UreE urease accessory protein, C-terminal domain AbD4_RS05640 PF02814 UreE urease accessory protein, N-terminal domain AbD4_RS05645 PF01730 UreF AbD4_RS05650 PF02492 CobW/HypB/UreG, nucleotide-binding domain AbD4_RS05665 PF03717 Penicillin-binding Protein dimerisation domain AbD4_RS05665 PF00905 Penicillin binding protein transpeptidase domain AbD4_RS05680 PF05191 Adenylate kinase, active site lid AbD4_RS05690 PF10576 Iron-sulfur binding domain of endonuclease III AbD4_RS05690 PF00633 Helix-hairpin-helix motif AbD4_RS05690 PF00730 HhH-GPD superfamily base excision DNA repair protein AbD4_RS05695 PF04060 Putative Fe-S cluster AbD4_RS05700 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AbD4_RS05700 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AbD4_RS05710 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AbD4_RS05715 PF02590 Predicted SPOUT methyltransferase AbD4_RS05720 PF02190 ATP-dependent protease La (LON) substrate-binding domain AbD4_RS05720 PF05362 Lon protease (S16) C-terminal proteolytic domain AbD4_RS05720 PF00004 ATPase family associated with various cellular activities (AAA) AbD4_RS05725 PF01812 5-formyltetrahydrofolate cyclo-ligase family AbD4_RS05765 PF05195 Aminopeptidase P, N-terminal domain AbD4_RS05765 PF00557 Metallopeptidase family M24 AbD4_RS05770 PF01494 FAD binding domain AbD4_RS05775 PF01494 FAD binding domain AbD4_RS05785 PF13411 MerR HTH family regulatory protein AbD4_RS05795 PF01810 LysE type translocator AbD4_RS05800 PF03466 LysR substrate binding domain AbD4_RS05800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS05810 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AbD4_RS05815 PF02021 Uncharacterised protein family UPF0102 AbD4_RS05820 PF04972 BON domain AbD4_RS05830 PF00293 NUDIX domain AbD4_RS05830 PF09297 NADH pyrophosphatase zinc ribbon domain AbD4_RS05840 PF00929 Exonuclease AbD4_RS05845 PF01464 Transglycosylase SLT domain AbD4_RS05845 PF01464 Transglycosylase SLT domain AbD4_RS05845 PF01476 LysM domain AbD4_RS05845 PF01476 LysM domain AbD4_RS05850 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AbD4_RS05855 PF00528 Binding-protein-dependent transport system inner membrane component AbD4_RS05860 PF00528 Binding-protein-dependent transport system inner membrane component AbD4_RS05860 PF12911 N-terminal TM domain of oligopeptide transport permease C AbD4_RS05865 PF00005 ABC transporter AbD4_RS05865 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AbD4_RS05870 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AbD4_RS05870 PF07992 Pyridine nucleotide-disulphide oxidoreductase AbD4_RS05875 PF00593 TonB dependent receptor AbD4_RS05875 PF07715 TonB-dependent Receptor Plug Domain AbD4_RS05885 PF00929 Exonuclease AbD4_RS05890 PF01979 Amidohydrolase family AbD4_RS05895 PF00563 EAL domain AbD4_RS05895 PF00990 Diguanylate cyclase, GGDEF domain AbD4_RS05895 PF00360 Phytochrome region AbD4_RS05895 PF01590 GAF domain AbD4_RS05910 PF03050 Transposase IS66 family AbD4_RS05910 PF13817 IS66 C-terminal element AbD4_RS05910 PF13007 Transposase C of IS166 homeodomain AbD4_RS05910 PF13005 zinc-finger binding domain of transposase IS66 AbD4_RS05915 PF00764 Arginosuccinate synthase AbD4_RS05925 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AbD4_RS05925 PF07992 Pyridine nucleotide-disulphide oxidoreductase AbD4_RS05935 PF03180 NLPA lipoprotein AbD4_RS05940 PF13817 IS66 C-terminal element AbD4_RS05940 PF13005 zinc-finger binding domain of transposase IS66 AbD4_RS05940 PF13007 Transposase C of IS166 homeodomain AbD4_RS05940 PF03050 Transposase IS66 family AbD4_RS05960 PF00884 Sulfatase AbD4_RS05965 PF03781 Sulfatase-modifying factor enzyme 1 AbD4_RS05975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS05975 PF03466 LysR substrate binding domain AbD4_RS05980 PF07690 Major Facilitator Superfamily AbD4_RS05995 PF00171 Aldehyde dehydrogenase family AbD4_RS06000 PF00465 Iron-containing alcohol dehydrogenase AbD4_RS06005 PF00775 Dioxygenase AbD4_RS06005 PF04444 Catechol dioxygenase N terminus AbD4_RS06020 PF01144 Coenzyme A transferase AbD4_RS06025 PF01144 Coenzyme A transferase AbD4_RS06030 PF00108 Thiolase, N-terminal domain AbD4_RS06030 PF02803 Thiolase, C-terminal domain AbD4_RS06045 PF03783 Curli production assembly/transport component CsgG AbD4_RS06055 PF05643 Putative bacterial lipoprotein (DUF799) AbD4_RS06065 PF00324 Amino acid permease AbD4_RS06070 PF01266 FAD dependent oxidoreductase AbD4_RS06075 PF00324 Amino acid permease AbD4_RS06085 PF07729 FCD domain AbD4_RS06085 PF00392 Bacterial regulatory proteins, gntR family AbD4_RS06095 PF00171 Aldehyde dehydrogenase family AbD4_RS06105 PF00202 Aminotransferase class-III AbD4_RS06110 PF04958 Arginine N-succinyltransferase beta subunit AbD4_RS06115 PF00324 Amino acid permease AbD4_RS06120 PF00171 Aldehyde dehydrogenase family AbD4_RS06125 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AbD4_RS06125 PF12833 Helix-turn-helix domain AbD4_RS06130 PF00892 EamA-like transporter family AbD4_RS06135 PF08666 SAF domain AbD4_RS06135 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AbD4_RS06140 PF07690 Major Facilitator Superfamily AbD4_RS06145 PF13378 Enolase C-terminal domain-like AbD4_RS06150 PF00701 Dihydrodipicolinate synthetase family AbD4_RS06155 PF00171 Aldehyde dehydrogenase family AbD4_RS06160 PF07729 FCD domain AbD4_RS06160 PF00392 Bacterial regulatory proteins, gntR family AbD4_RS06165 PF07519 Tannase and feruloyl esterase AbD4_RS06180 PF03573 outer membrane porin, OprD family AbD4_RS06185 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AbD4_RS06185 PF02770 Acyl-CoA dehydrogenase, middle domain AbD4_RS06185 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AbD4_RS06195 PF00171 Aldehyde dehydrogenase family AbD4_RS06200 PF00378 Enoyl-CoA hydratase/isomerase AbD4_RS06205 PF07690 Major Facilitator Superfamily AbD4_RS06220 PF00175 Oxidoreductase NAD-binding domain AbD4_RS06220 PF00111 2Fe-2S iron-sulfur cluster binding domain AbD4_RS06225 PF00355 Rieske [2Fe-2S] domain AbD4_RS06235 PF03781 Sulfatase-modifying factor enzyme 1 AbD4_RS06240 PF00884 Sulfatase AbD4_RS06245 PF07690 Major Facilitator Superfamily AbD4_RS06250 PF03573 outer membrane porin, OprD family AbD4_RS06255 PF05199 GMC oxidoreductase AbD4_RS06260 PF07859 alpha/beta hydrolase fold AbD4_RS06265 PF00106 short chain dehydrogenase AbD4_RS06270 PF00743 Flavin-binding monooxygenase-like AbD4_RS06275 PF12833 Helix-turn-helix domain AbD4_RS06275 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AbD4_RS06280 PF05683 Fumarase C-terminus AbD4_RS06285 PF05681 Fumarate hydratase (Fumerase) AbD4_RS06290 PF07690 Major Facilitator Superfamily AbD4_RS06295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS06295 PF03466 LysR substrate binding domain AbD4_RS06300 PF04072 Leucine carboxyl methyltransferase AbD4_RS06305 PF00743 Flavin-binding monooxygenase-like AbD4_RS06310 PF00106 short chain dehydrogenase AbD4_RS06320 PF00440 Bacterial regulatory proteins, tetR family AbD4_RS06320 PF17932 Tetracyclin repressor-like, C-terminal domain AbD4_RS06325 PF17954 Quercetinase C-terminal cupin domain AbD4_RS06325 PF02678 Pirin AbD4_RS06335 PF00106 short chain dehydrogenase AbD4_RS06340 PF00743 Flavin-binding monooxygenase-like AbD4_RS06350 PF00860 Permease family AbD4_RS06355 PF00962 Adenosine/AMP deaminase AbD4_RS06360 PF01292 Prokaryotic cytochrome b561 AbD4_RS06370 PF01351 Ribonuclease HII AbD4_RS06375 PF02599 Global regulator protein family AbD4_RS06380 PF13840 ACT domain AbD4_RS06380 PF00696 Amino acid kinase family AbD4_RS06380 PF01842 ACT domain AbD4_RS06385 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AbD4_RS06385 PF01411 tRNA synthetases class II (A) AbD4_RS06385 PF02272 DHHA1 domain AbD4_RS06390 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AbD4_RS06390 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AbD4_RS06395 PF13393 Histidyl-tRNA synthetase AbD4_RS06400 PF00709 Adenylosuccinate synthetase AbD4_RS06415 PF00248 Aldo/keto reductase family AbD4_RS06420 PF13545 Crp-like helix-turn-helix domain AbD4_RS06420 PF00027 Cyclic nucleotide-binding domain AbD4_RS06430 PF02566 OsmC-like protein AbD4_RS06445 PF02861 Clp amino terminal domain, pathogenicity island component AbD4_RS06445 PF17871 AAA lid domain AbD4_RS06445 PF07724 AAA domain (Cdc48 subfamily) AbD4_RS06445 PF00004 ATPase family associated with various cellular activities (AAA) AbD4_RS06445 PF10431 C-terminal, D2-small domain, of ClpB protein AbD4_RS06460 PF02926 THUMP domain AbD4_RS06460 PF10672 S-adenosylmethionine-dependent methyltransferase AbD4_RS06460 PF01170 Putative RNA methylase family UPF0020 AbD4_RS06470 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AbD4_RS06470 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AbD4_RS06475 PF01979 Amidohydrolase family AbD4_RS06480 PF00691 OmpA family AbD4_RS06480 PF13488 Glycine zipper AbD4_RS06490 PF13417 Glutathione S-transferase, N-terminal domain AbD4_RS06490 PF00043 Glutathione S-transferase, C-terminal domain AbD4_RS06495 PF02390 Putative methyltransferase AbD4_RS06505 PF02798 Glutathione S-transferase, N-terminal domain AbD4_RS06505 PF00043 Glutathione S-transferase, C-terminal domain AbD4_RS06515 PF13192 Thioredoxin domain AbD4_RS06515 PF07992 Pyridine nucleotide-disulphide oxidoreductase AbD4_RS06535 PF10417 C-terminal domain of 1-Cys peroxiredoxin AbD4_RS06535 PF00578 AhpC/TSA family AbD4_RS06540 PF00270 DEAD/DEAH box helicase AbD4_RS06540 PF11898 Domain of unknown function (DUF3418) AbD4_RS06540 PF04408 Helicase associated domain (HA2) AbD4_RS06540 PF00271 Helicase conserved C-terminal domain AbD4_RS06540 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AbD4_RS06545 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AbD4_RS06545 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AbD4_RS06555 PF07690 Major Facilitator Superfamily AbD4_RS06560 PF03594 Benzoate membrane transport protein AbD4_RS06565 PF00106 short chain dehydrogenase AbD4_RS06570 PF00111 2Fe-2S iron-sulfur cluster binding domain AbD4_RS06570 PF00970 Oxidoreductase FAD-binding domain AbD4_RS06570 PF00175 Oxidoreductase NAD-binding domain AbD4_RS06580 PF00355 Rieske [2Fe-2S] domain AbD4_RS06580 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AbD4_RS06590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS06590 PF03466 LysR substrate binding domain AbD4_RS06600 PF00970 Oxidoreductase FAD-binding domain AbD4_RS06600 PF00111 2Fe-2S iron-sulfur cluster binding domain AbD4_RS06600 PF00175 Oxidoreductase NAD-binding domain AbD4_RS06610 PF02332 Methane/Phenol/Toluene Hydroxylase AbD4_RS06610 PF04945 YHS domain AbD4_RS06615 PF02406 MmoB/DmpM family AbD4_RS06620 PF02332 Methane/Phenol/Toluene Hydroxylase AbD4_RS06630 PF02954 Bacterial regulatory protein, Fis family AbD4_RS06630 PF00158 Sigma-54 interaction domain AbD4_RS06630 PF02830 V4R domain AbD4_RS06630 PF06505 Activator of aromatic catabolism AbD4_RS06640 PF00403 Heavy-metal-associated domain AbD4_RS06645 PF00376 MerR family regulatory protein AbD4_RS06645 PF09278 MerR, DNA binding AbD4_RS06680 PF13742 OB-fold nucleic acid binding domain AbD4_RS06680 PF02601 Exonuclease VII, large subunit AbD4_RS06710 PF01810 LysE type translocator AbD4_RS06715 PF00313 'Cold-shock' DNA-binding domain AbD4_RS06725 PF03807 NADP oxidoreductase coenzyme F420-dependent AbD4_RS06725 PF14748 Pyrroline-5-carboxylate reductase dimerisation AbD4_RS06750 PF07690 Major Facilitator Superfamily AbD4_RS06755 PF01638 HxlR-like helix-turn-helix AbD4_RS06885 PF03592 Terminase small subunit AbD4_RS06885 PF10668 Phage terminase small subunit AbD4_RS07010 PF00589 Phage integrase family AbD4_RS07020 PF01406 tRNA synthetases class I (C) catalytic domain AbD4_RS07020 PF09190 DALR domain AbD4_RS07025 PF01380 SIS domain AbD4_RS07025 PF00571 CBS domain AbD4_RS07040 PF03968 OstA-like protein AbD4_RS07045 PF00005 ABC transporter AbD4_RS07045 PF12399 Branched-chain amino acid ATP-binding cassette transporter AbD4_RS07065 PF00005 ABC transporter AbD4_RS07065 PF00664 ABC transporter transmembrane region AbD4_RS07065 PF03412 Peptidase C39 family AbD4_RS07075 PF01205 Uncharacterized protein family UPF0029 AbD4_RS07080 PF00132 Bacterial transferase hexapeptide (six repeats) AbD4_RS07090 PF01596 O-methyltransferase AbD4_RS07100 PF11953 Domain of unknown function (DUF3470) AbD4_RS07100 PF00037 4Fe-4S binding domain AbD4_RS07110 PF01624 MutS domain I AbD4_RS07110 PF05190 MutS family domain IV AbD4_RS07110 PF05188 MutS domain II AbD4_RS07110 PF05192 MutS domain III AbD4_RS07110 PF00488 MutS domain V AbD4_RS07115 PF01037 Lrp/AsnC ligand binding domain AbD4_RS07120 PF00892 EamA-like transporter family AbD4_RS07130 PF03279 Bacterial lipid A biosynthesis acyltransferase AbD4_RS07135 PF01544 CorA-like Mg2+ transporter protein AbD4_RS07150 PF07690 Major Facilitator Superfamily AbD4_RS07170 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AbD4_RS07170 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AbD4_RS07190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS07190 PF03466 LysR substrate binding domain AbD4_RS07195 PF01566 Natural resistance-associated macrophage protein AbD4_RS07200 PF03746 LamB/YcsF family AbD4_RS07205 PF07286 Protein of unknown function (DUF1445) AbD4_RS07215 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AbD4_RS07215 PF02785 Biotin carboxylase C-terminal domain AbD4_RS07215 PF00289 Biotin carboxylase, N-terminal domain AbD4_RS07215 PF00364 Biotin-requiring enzyme AbD4_RS07220 PF00654 Voltage gated chloride channel AbD4_RS07225 PF17287 POTRA domain AbD4_RS07225 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AbD4_RS07225 PF08479 POTRA domain, ShlB-type AbD4_RS07230 PF13332 Hemagglutinin repeat AbD4_RS07230 PF13018 Extended Signal Peptide of Type V secretion system AbD4_RS07230 PF04829 Pre-toxin domain with VENN motif AbD4_RS07230 PF05860 haemagglutination activity domain AbD4_RS07240 PF00440 Bacterial regulatory proteins, tetR family AbD4_RS07250 PF00107 Zinc-binding dehydrogenase AbD4_RS07250 PF13823 Alcohol dehydrogenase GroES-associated AbD4_RS07250 PF08240 Alcohol dehydrogenase GroES-like domain AbD4_RS07265 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AbD4_RS07265 PF02785 Biotin carboxylase C-terminal domain AbD4_RS07265 PF00289 Biotin carboxylase, N-terminal domain AbD4_RS07270 PF02525 Flavodoxin-like fold AbD4_RS07275 PF01638 HxlR-like helix-turn-helix AbD4_RS07285 PF08753 NikR C terminal nickel binding domain AbD4_RS07285 PF01402 Ribbon-helix-helix protein, copG family AbD4_RS07290 PF01425 Amidase AbD4_RS07295 PF00497 Bacterial extracellular solute-binding proteins, family 3 AbD4_RS07300 PF00005 ABC transporter AbD4_RS07315 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) AbD4_RS07315 PF04717 Type VI secretion system, phage-baseplate injector AbD4_RS07315 PF13296 Putative type VI secretion system Rhs element Vgr AbD4_RS07330 PF13817 IS66 C-terminal element AbD4_RS07330 PF13007 Transposase C of IS166 homeodomain AbD4_RS07330 PF13005 zinc-finger binding domain of transposase IS66 AbD4_RS07330 PF03050 Transposase IS66 family AbD4_RS07390 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath AbD4_RS07405 PF05947 Type VI secretion system, TssF AbD4_RS07420 PF06761 Intracellular multiplication and human macrophage-killing AbD4_RS07420 PF14331 ImcF-related N-terminal domain AbD4_RS07420 PF06744 Type VI secretion protein IcmF C-terminal AbD4_RS07430 PF01389 OmpA-like transmembrane domain AbD4_RS07430 PF00691 OmpA family AbD4_RS07440 PF07724 AAA domain (Cdc48 subfamily) AbD4_RS07440 PF00004 ATPase family associated with various cellular activities (AAA) AbD4_RS07440 PF17871 AAA lid domain AbD4_RS07440 PF10431 C-terminal, D2-small domain, of ClpB protein AbD4_RS07445 PF06812 ImpA, N-terminal, type VI secretion system AbD4_RS07450 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE AbD4_RS07470 PF03466 LysR substrate binding domain AbD4_RS07470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS07480 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AbD4_RS07485 PF07690 Major Facilitator Superfamily AbD4_RS07500 PF02677 Epoxyqueuosine reductase QueH AbD4_RS07510 PF00376 MerR family regulatory protein AbD4_RS07510 PF09278 MerR, DNA binding AbD4_RS07520 PF00701 Dihydrodipicolinate synthetase family AbD4_RS07530 PF00392 Bacterial regulatory proteins, gntR family AbD4_RS07535 PF05544 Proline racemase AbD4_RS07540 PF01266 FAD dependent oxidoreductase AbD4_RS07550 PF07992 Pyridine nucleotide-disulphide oxidoreductase AbD4_RS07550 PF04324 BFD-like [2Fe-2S] binding domain AbD4_RS07560 PF00083 Sugar (and other) transporter AbD4_RS07565 PF00171 Aldehyde dehydrogenase family AbD4_RS07570 PF13520 Amino acid permease AbD4_RS07575 PF03315 Serine dehydratase beta chain AbD4_RS07575 PF03313 Serine dehydratase alpha chain AbD4_RS07580 PF01575 MaoC like domain AbD4_RS07580 PF00171 Aldehyde dehydrogenase family AbD4_RS07585 PF05138 Phenylacetic acid catabolic protein AbD4_RS07590 PF06243 Phenylacetic acid degradation B AbD4_RS07595 PF05138 Phenylacetic acid catabolic protein AbD4_RS07600 PF01883 Iron-sulfur cluster assembly protein AbD4_RS07605 PF00970 Oxidoreductase FAD-binding domain AbD4_RS07605 PF00175 Oxidoreductase NAD-binding domain AbD4_RS07605 PF00111 2Fe-2S iron-sulfur cluster binding domain AbD4_RS07610 PF00378 Enoyl-CoA hydratase/isomerase AbD4_RS07615 PF00378 Enoyl-CoA hydratase/isomerase AbD4_RS07620 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain AbD4_RS07620 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AbD4_RS07620 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AbD4_RS07625 PF02803 Thiolase, C-terminal domain AbD4_RS07625 PF00108 Thiolase, N-terminal domain AbD4_RS07630 PF14535 AMP-binding enzyme C-terminal domain AbD4_RS07630 PF00501 AMP-binding enzyme AbD4_RS07635 PF08223 PaaX-like protein C-terminal domain AbD4_RS07635 PF07848 PaaX-like protein AbD4_RS07640 PF00132 Bacterial transferase hexapeptide (six repeats) AbD4_RS07645 PF03061 Thioesterase superfamily AbD4_RS07655 PF04851 Type III restriction enzyme, res subunit AbD4_RS07655 PF02151 UvrB/uvrC motif AbD4_RS07655 PF17757 UvrB interaction domain AbD4_RS07655 PF00271 Helicase conserved C-terminal domain AbD4_RS07655 PF12344 Ultra-violet resistance protein B AbD4_RS07670 PF06719 AraC-type transcriptional regulator N-terminus AbD4_RS07670 PF12833 Helix-turn-helix domain AbD4_RS07685 PF02515 CoA-transferase family III AbD4_RS07690 PF00682 HMGL-like AbD4_RS07695 PF07690 Major Facilitator Superfamily AbD4_RS07700 PF00199 Catalase AbD4_RS07705 PF01292 Prokaryotic cytochrome b561 AbD4_RS07725 PF12697 Alpha/beta hydrolase family AbD4_RS07730 PF01613 Flavin reductase like domain AbD4_RS07735 PF00296 Luciferase-like monooxygenase AbD4_RS07740 PF00171 Aldehyde dehydrogenase family AbD4_RS07750 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AbD4_RS07760 PF00171 Aldehyde dehydrogenase family AbD4_RS07765 PF02627 Carboxymuconolactone decarboxylase family AbD4_RS07770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS07770 PF03466 LysR substrate binding domain AbD4_RS07775 PF02525 Flavodoxin-like fold AbD4_RS07780 PF09339 IclR helix-turn-helix domain AbD4_RS07780 PF01614 Bacterial transcriptional regulator AbD4_RS07785 PF01494 FAD binding domain AbD4_RS07790 PF00392 Bacterial regulatory proteins, gntR family AbD4_RS07790 PF07702 UTRA domain AbD4_RS07800 PF08402 TOBE domain AbD4_RS07800 PF00005 ABC transporter AbD4_RS07805 PF00528 Binding-protein-dependent transport system inner membrane component AbD4_RS07810 PF01266 FAD dependent oxidoreductase AbD4_RS07815 PF00266 Aminotransferase class-V AbD4_RS07820 PF13419 Haloacid dehalogenase-like hydrolase AbD4_RS07825 PF07690 Major Facilitator Superfamily AbD4_RS07830 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AbD4_RS07830 PF02770 Acyl-CoA dehydrogenase, middle domain AbD4_RS07830 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AbD4_RS07835 PF02515 CoA-transferase family III AbD4_RS07840 PF09339 IclR helix-turn-helix domain AbD4_RS07845 PF00378 Enoyl-CoA hydratase/isomerase AbD4_RS07850 PF03060 Nitronate monooxygenase AbD4_RS07855 PF07690 Major Facilitator Superfamily AbD4_RS07860 PF09339 IclR helix-turn-helix domain AbD4_RS07865 PF00108 Thiolase, N-terminal domain AbD4_RS07865 PF02803 Thiolase, C-terminal domain AbD4_RS07870 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain AbD4_RS07870 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AbD4_RS07870 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AbD4_RS07880 PF00378 Enoyl-CoA hydratase/isomerase AbD4_RS07885 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AbD4_RS07885 PF02770 Acyl-CoA dehydrogenase, middle domain AbD4_RS07885 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AbD4_RS07890 PF07690 Major Facilitator Superfamily AbD4_RS07895 PF01144 Coenzyme A transferase AbD4_RS07900 PF01144 Coenzyme A transferase AbD4_RS07910 PF07690 Major Facilitator Superfamily AbD4_RS07920 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AbD4_RS07920 PF12806 Acetyl-CoA dehydrogenase C-terminal like AbD4_RS07920 PF02770 Acyl-CoA dehydrogenase, middle domain AbD4_RS07920 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AbD4_RS07935 PF03466 LysR substrate binding domain AbD4_RS07935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS07940 PF00682 HMGL-like AbD4_RS07945 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AbD4_RS07945 PF00364 Biotin-requiring enzyme AbD4_RS07945 PF00289 Biotin carboxylase, N-terminal domain AbD4_RS07945 PF02785 Biotin carboxylase C-terminal domain AbD4_RS07945 PF18140 Propionyl-coenzyme A carboxylase BT domain AbD4_RS07950 PF00378 Enoyl-CoA hydratase/isomerase AbD4_RS07955 PF01039 Carboxyl transferase domain AbD4_RS07960 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AbD4_RS07960 PF02770 Acyl-CoA dehydrogenase, middle domain AbD4_RS07960 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AbD4_RS07965 PF00440 Bacterial regulatory proteins, tetR family AbD4_RS07970 PF00501 AMP-binding enzyme AbD4_RS07970 PF13193 AMP-binding enzyme C-terminal domain AbD4_RS07990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS07990 PF03466 LysR substrate binding domain AbD4_RS08025 PF02464 Competence-damaged protein AbD4_RS08025 PF18146 Damage-inducible protein CinA KH domain AbD4_RS08025 PF00994 Probable molybdopterin binding domain AbD4_RS08035 PF18011 C-terminal domain found in long catalases AbD4_RS08035 PF06628 Catalase-related immune-responsive AbD4_RS08035 PF00199 Catalase AbD4_RS08060 PF00717 Peptidase S24-like AbD4_RS08070 PF13404 AsnC-type helix-turn-helix domain AbD4_RS08070 PF01037 Lrp/AsnC ligand binding domain AbD4_RS08080 PF00072 Response regulator receiver domain AbD4_RS08080 PF09308 LuxQ, periplasmic AbD4_RS08080 PF00512 His Kinase A (phospho-acceptor) domain AbD4_RS08080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AbD4_RS08085 PF00072 Response regulator receiver domain AbD4_RS08090 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AbD4_RS08100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS08100 PF03466 LysR substrate binding domain AbD4_RS08105 PF07690 Major Facilitator Superfamily AbD4_RS08120 PF00528 Binding-protein-dependent transport system inner membrane component AbD4_RS08125 PF00528 Binding-protein-dependent transport system inner membrane component AbD4_RS08130 PF00005 ABC transporter AbD4_RS08135 PF00497 Bacterial extracellular solute-binding proteins, family 3 AbD4_RS08140 PF00497 Bacterial extracellular solute-binding proteins, family 3 AbD4_RS08150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS08150 PF03466 LysR substrate binding domain AbD4_RS08155 PF01810 LysE type translocator AbD4_RS08160 PF00266 Aminotransferase class-V AbD4_RS08170 PF00132 Bacterial transferase hexapeptide (six repeats) AbD4_RS08175 PF00581 Rhodanese-like domain AbD4_RS08185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS08185 PF03466 LysR substrate binding domain AbD4_RS08190 PF02798 Glutathione S-transferase, N-terminal domain AbD4_RS08195 PF14834 Glutathione S-transferase, C-terminal domain AbD4_RS08195 PF02798 Glutathione S-transferase, N-terminal domain AbD4_RS08200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS08200 PF03466 LysR substrate binding domain AbD4_RS08205 PF03788 LrgA family AbD4_RS08210 PF04172 LrgB-like family AbD4_RS08215 PF00155 Aminotransferase class I and II AbD4_RS08215 PF00392 Bacterial regulatory proteins, gntR family AbD4_RS08235 PF00106 short chain dehydrogenase AbD4_RS08240 PF16957 Malonate decarboxylase, alpha subunit, transporter AbD4_RS08245 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AbD4_RS08250 PF06857 Malonate decarboxylase delta subunit (MdcD) AbD4_RS08255 PF01039 Carboxyl transferase domain AbD4_RS08265 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG AbD4_RS08270 PF00698 Acyl transferase domain AbD4_RS08285 PF03466 LysR substrate binding domain AbD4_RS08285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS08290 PF00392 Bacterial regulatory proteins, gntR family AbD4_RS08290 PF00155 Aminotransferase class I and II AbD4_RS08300 PF02322 Cytochrome bd terminal oxidase subunit II AbD4_RS08305 PF01654 Cytochrome bd terminal oxidase subunit I AbD4_RS08315 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AbD4_RS08315 PF02770 Acyl-CoA dehydrogenase, middle domain AbD4_RS08315 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AbD4_RS08320 PF00296 Luciferase-like monooxygenase AbD4_RS08325 PF00083 Sugar (and other) transporter AbD4_RS08335 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AbD4_RS08340 PF00005 ABC transporter AbD4_RS08345 PF00528 Binding-protein-dependent transport system inner membrane component AbD4_RS08350 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AbD4_RS08355 PF01177 Asp/Glu/Hydantoin racemase AbD4_RS08360 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AbD4_RS08370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS08370 PF03466 LysR substrate binding domain AbD4_RS08380 PF13382 Adenine deaminase C-terminal domain AbD4_RS08380 PF01979 Amidohydrolase family AbD4_RS08390 PF03960 ArsC family AbD4_RS08395 PF01022 Bacterial regulatory protein, arsR family AbD4_RS08400 PF01758 Sodium Bile acid symporter family AbD4_RS08405 PF03466 LysR substrate binding domain AbD4_RS08405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS08420 PF07992 Pyridine nucleotide-disulphide oxidoreductase AbD4_RS08420 PF13192 Thioredoxin domain AbD4_RS08435 PF00132 Bacterial transferase hexapeptide (six repeats) AbD4_RS08440 PF00588 SpoU rRNA Methylase family AbD4_RS08445 PF02811 PHP domain AbD4_RS08445 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AbD4_RS08445 PF14579 Helix-hairpin-helix motif AbD4_RS08445 PF07733 Bacterial DNA polymerase III alpha NTPase domain AbD4_RS08445 PF01336 OB-fold nucleic acid binding domain AbD4_RS08450 PF00710 Asparaginase, N-terminal AbD4_RS08450 PF17763 Glutaminase/Asparaginase C-terminal domain AbD4_RS08455 PF00375 Sodium:dicarboxylate symporter family AbD4_RS08460 PF00155 Aminotransferase class I and II AbD4_RS08465 PF01641 SelR domain AbD4_RS08470 PF00255 Glutathione peroxidase AbD4_RS08475 PF12833 Helix-turn-helix domain AbD4_RS08475 PF12852 Cupin AbD4_RS08485 PF13007 Transposase C of IS166 homeodomain AbD4_RS08485 PF13005 zinc-finger binding domain of transposase IS66 AbD4_RS08485 PF13817 IS66 C-terminal element AbD4_RS08485 PF03050 Transposase IS66 family AbD4_RS08500 PF00155 Aminotransferase class I and II AbD4_RS08505 PF08335 GlnD PII-uridylyltransferase AbD4_RS08505 PF01966 HD domain AbD4_RS08505 PF01909 Nucleotidyltransferase domain AbD4_RS08510 PF02222 ATP-grasp domain AbD4_RS08520 PF05437 Branched-chain amino acid transport protein (AzlD) AbD4_RS08525 PF03591 AzlC protein AbD4_RS08550 PF06071 Protein of unknown function (DUF933) AbD4_RS08550 PF01926 50S ribosome-binding GTPase AbD4_RS08555 PF00528 Binding-protein-dependent transport system inner membrane component AbD4_RS08560 PF00005 ABC transporter AbD4_RS08560 PF09383 NIL domain AbD4_RS08565 PF03180 NLPA lipoprotein AbD4_RS08570 PF03180 NLPA lipoprotein AbD4_RS08575 PF00296 Luciferase-like monooxygenase AbD4_RS08585 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AbD4_RS08585 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AbD4_RS08600 PF00528 Binding-protein-dependent transport system inner membrane component AbD4_RS08605 PF00528 Binding-protein-dependent transport system inner membrane component AbD4_RS08610 PF00005 ABC transporter AbD4_RS08620 PF01037 Lrp/AsnC ligand binding domain AbD4_RS08625 PF01709 Transcriptional regulator AbD4_RS08635 PF00440 Bacterial regulatory proteins, tetR family AbD4_RS08655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS08655 PF03466 LysR substrate binding domain AbD4_RS08665 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AbD4_RS08675 PF00892 EamA-like transporter family AbD4_RS08695 PF00577 Outer membrane usher protein AbD4_RS08695 PF13954 PapC N-terminal domain AbD4_RS08695 PF13953 PapC C-terminal domain AbD4_RS08700 PF02753 Pili assembly chaperone PapD, C-terminal domain AbD4_RS08700 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AbD4_RS08705 PF16970 Type-1 fimbrial protein, A AbD4_RS08720 PF06968 Biotin and Thiamin Synthesis associated domain AbD4_RS08720 PF04055 Radical SAM superfamily AbD4_RS08725 PF08331 Domain of unknown function (DUF1730) AbD4_RS08730 PF03853 YjeF-related protein N-terminus AbD4_RS08730 PF01256 Carbohydrate kinase AbD4_RS08735 PF02075 Crossover junction endodeoxyribonuclease RuvC AbD4_RS08750 PF00905 Penicillin binding protein transpeptidase domain AbD4_RS08770 PF02772 S-adenosylmethionine synthetase, central domain AbD4_RS08770 PF00438 S-adenosylmethionine synthetase, N-terminal domain AbD4_RS08770 PF02773 S-adenosylmethionine synthetase, C-terminal domain AbD4_RS08775 PF02779 Transketolase, pyrimidine binding domain AbD4_RS08775 PF02780 Transketolase, C-terminal domain AbD4_RS08775 PF00456 Transketolase, thiamine diphosphate binding domain AbD4_RS08785 PF04264 YceI-like domain AbD4_RS08795 PF09992 Phosphodiester glycosidase AbD4_RS08805 PF05958 tRNA (Uracil-5-)-methyltransferase AbD4_RS08810 PF04229 GrpB protein AbD4_RS08815 PF00171 Aldehyde dehydrogenase family AbD4_RS08815 PF01619 Proline dehydrogenase AbD4_RS08815 PF14850 DNA-binding domain of Proline dehydrogenase AbD4_RS08815 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AbD4_RS08820 PF01037 Lrp/AsnC ligand binding domain AbD4_RS08825 PF00474 Sodium:solute symporter family AbD4_RS08830 PF02146 Sir2 family AbD4_RS08835 PF01597 Glycine cleavage H-protein AbD4_RS08840 PF12833 Helix-turn-helix domain AbD4_RS08840 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AbD4_RS08850 PF00664 ABC transporter transmembrane region AbD4_RS08850 PF00005 ABC transporter AbD4_RS08855 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) AbD4_RS08860 PF06912 Protein of unknown function (DUF1275) AbD4_RS08865 PF00375 Sodium:dicarboxylate symporter family AbD4_RS08880 PF08007 Cupin superfamily protein AbD4_RS08885 PF02545 Maf-like protein AbD4_RS08895 PF00162 Phosphoglycerate kinase AbD4_RS08905 PF01116 Fructose-bisphosphate aldolase class-II AbD4_RS08910 PF09312 SurA N-terminal domain AbD4_RS08910 PF00639 PPIC-type PPIASE domain AbD4_RS08915 PF04453 LPS transport system D AbD4_RS08915 PF03968 OstA-like protein AbD4_RS08920 PF01636 Phosphotransferase enzyme family AbD4_RS08925 PF00483 Nucleotidyl transferase AbD4_RS08930 PF02527 rRNA small subunit methyltransferase G AbD4_RS08935 PF13614 AAA domain AbD4_RS08940 PF17762 HTH domain found in ParB protein AbD4_RS08940 PF02195 ParB-like nuclease domain AbD4_RS08945 PF01618 MotA/TolQ/ExbB proton channel family AbD4_RS08955 PF00005 ABC transporter AbD4_RS08955 PF00664 ABC transporter transmembrane region AbD4_RS08960 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AbD4_RS08965 PF02348 Cytidylyltransferase AbD4_RS08970 PF09115 DNA polymerase III, delta subunit, C terminal AbD4_RS08980 PF01026 TatD related DNase AbD4_RS08995 PF07963 Prokaryotic N-terminal methylation motif AbD4_RS08995 PF02501 Type II secretion system (T2SS), protein I AbD4_RS09000 PF07963 Prokaryotic N-terminal methylation motif AbD4_RS09000 PF11612 Type II secretion system (T2SS), protein J AbD4_RS09005 PF03934 Type II secretion system (T2SS), protein K AbD4_RS09015 PF03167 Uracil DNA glycosylase superfamily AbD4_RS09025 PF14437 MafB19-like deaminase AbD4_RS09035 PF02224 Cytidylate kinase AbD4_RS09040 PF00575 S1 RNA binding domain AbD4_RS09045 PF00216 Bacterial DNA-binding protein AbD4_RS09055 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AbD4_RS09065 PF00743 Flavin-binding monooxygenase-like AbD4_RS09075 PF03969 AFG1-like ATPase AbD4_RS09080 PF01274 Malate synthase AbD4_RS09090 PF02472 Biopolymer transport protein ExbD/TolR AbD4_RS09095 PF02472 Biopolymer transport protein ExbD/TolR AbD4_RS09100 PF01618 MotA/TolQ/ExbB proton channel family AbD4_RS09115 PF13007 Transposase C of IS166 homeodomain AbD4_RS09115 PF13817 IS66 C-terminal element AbD4_RS09115 PF03050 Transposase IS66 family AbD4_RS09115 PF13005 zinc-finger binding domain of transposase IS66 AbD4_RS09140 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AbD4_RS09155 PF00528 Binding-protein-dependent transport system inner membrane component AbD4_RS09160 PF00528 Binding-protein-dependent transport system inner membrane component AbD4_RS09165 PF00005 ABC transporter AbD4_RS09165 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AbD4_RS09180 PF00459 Inositol monophosphatase family AbD4_RS09190 PF01649 Ribosomal protein S20 AbD4_RS09195 PF13460 NAD(P)H-binding AbD4_RS09200 PF03737 Aldolase/RraA AbD4_RS09220 PF02559 CarD-like/TRCF domain AbD4_RS09220 PF00270 DEAD/DEAH box helicase AbD4_RS09220 PF00271 Helicase conserved C-terminal domain AbD4_RS09220 PF03461 TRCF domain AbD4_RS09220 PF17757 UvrB interaction domain AbD4_RS09230 PF00211 Adenylate and Guanylate cyclase catalytic domain AbD4_RS09235 PF00111 2Fe-2S iron-sulfur cluster binding domain AbD4_RS09240 PF00012 Hsp70 protein AbD4_RS09245 PF00226 DnaJ domain AbD4_RS09245 PF07743 HSCB C-terminal oligomerisation domain AbD4_RS09250 PF01521 Iron-sulphur cluster biosynthesis AbD4_RS09255 PF01592 NifU-like N terminal domain AbD4_RS09260 PF00266 Aminotransferase class-V AbD4_RS09265 PF02082 Transcriptional regulator AbD4_RS09280 PF00216 Bacterial DNA-binding protein AbD4_RS09285 PF09312 SurA N-terminal domain AbD4_RS09285 PF00639 PPIC-type PPIASE domain AbD4_RS09290 PF12852 Cupin AbD4_RS09290 PF12833 Helix-turn-helix domain AbD4_RS09295 PF00487 Fatty acid desaturase AbD4_RS09300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AbD4_RS09300 PF02770 Acyl-CoA dehydrogenase, middle domain AbD4_RS09300 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AbD4_RS09305 PF02770 Acyl-CoA dehydrogenase, middle domain AbD4_RS09305 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AbD4_RS09305 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AbD4_RS09310 PF03109 ABC1 family AbD4_RS09320 PF04073 Aminoacyl-tRNA editing domain AbD4_RS09325 PF06276 Ferric iron reductase FhuF-like transporter AbD4_RS09325 PF04183 IucA / IucC family AbD4_RS09330 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AbD4_RS09335 PF07690 Major Facilitator Superfamily AbD4_RS09340 PF06276 Ferric iron reductase FhuF-like transporter AbD4_RS09340 PF04183 IucA / IucC family AbD4_RS09345 PF06276 Ferric iron reductase FhuF-like transporter AbD4_RS09345 PF04183 IucA / IucC family AbD4_RS09355 PF03737 Aldolase/RraA AbD4_RS09360 PF00593 TonB dependent receptor AbD4_RS09360 PF07715 TonB-dependent Receptor Plug Domain AbD4_RS09385 PF13419 Haloacid dehalogenase-like hydrolase AbD4_RS09395 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AbD4_RS09400 PF02277 Phosphoribosyltransferase AbD4_RS09405 PF00300 Histidine phosphatase superfamily (branch 1) AbD4_RS09415 PF02654 Cobalamin-5-phosphate synthase AbD4_RS09420 PF00793 DAHP synthetase I family AbD4_RS09425 PF01925 Sulfite exporter TauE/SafE AbD4_RS09445 PF00593 TonB dependent receptor AbD4_RS09445 PF07715 TonB-dependent Receptor Plug Domain AbD4_RS09450 PF02684 Lipid-A-disaccharide synthetase AbD4_RS09460 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AbD4_RS09465 PF00005 ABC transporter AbD4_RS09500 PF01230 HIT domain AbD4_RS09530 PF08241 Methyltransferase domain AbD4_RS09535 PF00561 alpha/beta hydrolase fold AbD4_RS09540 PF01053 Cys/Met metabolism PLP-dependent enzyme AbD4_RS09550 PF02575 YbaB/EbfC DNA-binding family AbD4_RS09555 PF13662 Toprim domain AbD4_RS09555 PF02132 RecR protein AbD4_RS09560 PF01612 3'-5' exonuclease AbD4_RS09560 PF00570 HRDC domain AbD4_RS09580 PF05166 YcgL domain AbD4_RS09590 PF00004 ATPase family associated with various cellular activities (AAA) AbD4_RS09590 PF17862 AAA+ lid domain AbD4_RS09590 PF01434 Peptidase family M41 AbD4_RS09600 PF00291 Pyridoxal-phosphate dependent enzyme AbD4_RS09605 PF05175 Methyltransferase small domain AbD4_RS09610 PF01264 Chorismate synthase AbD4_RS09615 PF00990 Diguanylate cyclase, GGDEF domain AbD4_RS09615 PF08448 PAS fold AbD4_RS09630 PF04055 Radical SAM superfamily AbD4_RS09635 PF00676 Dehydrogenase E1 component AbD4_RS09640 PF02779 Transketolase, pyrimidine binding domain AbD4_RS09640 PF02780 Transketolase, C-terminal domain AbD4_RS09645 PF02817 e3 binding domain AbD4_RS09645 PF00364 Biotin-requiring enzyme AbD4_RS09645 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AbD4_RS09650 PF07992 Pyridine nucleotide-disulphide oxidoreductase AbD4_RS09650 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AbD4_RS09655 PF00106 short chain dehydrogenase AbD4_RS09660 PF08240 Alcohol dehydrogenase GroES-like domain AbD4_RS09660 PF00107 Zinc-binding dehydrogenase AbD4_RS09665 PF01062 Bestrophin, RFP-TM, chloride channel AbD4_RS09670 PF02954 Bacterial regulatory protein, Fis family AbD4_RS09670 PF00072 Response regulator receiver domain AbD4_RS09670 PF00158 Sigma-54 interaction domain AbD4_RS09675 PF04273 Putative phosphatase (DUF442) AbD4_RS09675 PF00753 Metallo-beta-lactamase superfamily AbD4_RS09685 PF01925 Sulfite exporter TauE/SafE AbD4_RS09700 PF06445 GyrI-like small molecule binding domain AbD4_RS09700 PF12833 Helix-turn-helix domain AbD4_RS09705 PF01638 HxlR-like helix-turn-helix AbD4_RS09710 PF02525 Flavodoxin-like fold AbD4_RS09720 PF00392 Bacterial regulatory proteins, gntR family AbD4_RS09720 PF07702 UTRA domain AbD4_RS09735 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AbD4_RS09740 PF00528 Binding-protein-dependent transport system inner membrane component AbD4_RS09745 PF00005 ABC transporter AbD4_RS09760 PF00083 Sugar (and other) transporter AbD4_RS09765 PF07715 TonB-dependent Receptor Plug Domain AbD4_RS09765 PF00593 TonB dependent receptor AbD4_RS09770 PF00206 Lyase AbD4_RS09770 PF10415 Fumarase C C-terminus AbD4_RS09785 PF03466 LysR substrate binding domain AbD4_RS09785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS09790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS09790 PF03466 LysR substrate binding domain AbD4_RS09795 PF02803 Thiolase, C-terminal domain AbD4_RS09795 PF00108 Thiolase, N-terminal domain AbD4_RS09800 PF02667 Short chain fatty acid transporter AbD4_RS09805 PF01144 Coenzyme A transferase AbD4_RS09810 PF01144 Coenzyme A transferase AbD4_RS09815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS09815 PF03466 LysR substrate binding domain AbD4_RS09835 PF00440 Bacterial regulatory proteins, tetR family AbD4_RS09855 PF12833 Helix-turn-helix domain AbD4_RS09855 PF06719 AraC-type transcriptional regulator N-terminus AbD4_RS09860 PF07690 Major Facilitator Superfamily AbD4_RS09865 PF01738 Dienelactone hydrolase family AbD4_RS09880 PF01613 Flavin reductase like domain AbD4_RS09895 PF00970 Oxidoreductase FAD-binding domain AbD4_RS09895 PF00111 2Fe-2S iron-sulfur cluster binding domain AbD4_RS09895 PF00175 Oxidoreductase NAD-binding domain AbD4_RS09900 PF00866 Ring hydroxylating beta subunit AbD4_RS09905 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AbD4_RS09905 PF00355 Rieske [2Fe-2S] domain AbD4_RS09910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS09910 PF03459 TOBE domain AbD4_RS09920 PF00528 Binding-protein-dependent transport system inner membrane component AbD4_RS09925 PF00005 ABC transporter AbD4_RS09925 PF03459 TOBE domain AbD4_RS09930 PF00106 short chain dehydrogenase AbD4_RS09935 PF00857 Isochorismatase family AbD4_RS09935 PF00550 Phosphopantetheine attachment site AbD4_RS09945 PF00149 Calcineurin-like phosphoesterase AbD4_RS09950 PF17941 Polyphosphate kinase C-terminal domain 1 AbD4_RS09950 PF02503 Polyphosphate kinase middle domain AbD4_RS09950 PF13090 Polyphosphate kinase C-terminal domain 2 AbD4_RS09950 PF13089 Polyphosphate kinase N-terminal domain AbD4_RS09955 PF08042 PqqA family AbD4_RS09960 PF12706 Beta-lactamase superfamily domain AbD4_RS09965 PF03070 TENA/THI-4/PQQC family AbD4_RS09970 PF05402 Coenzyme PQQ synthesis protein D (PqqD) AbD4_RS09975 PF04055 Radical SAM superfamily AbD4_RS09975 PF13186 Iron-sulfur cluster-binding domain AbD4_RS09980 PF01244 Membrane dipeptidase (Peptidase family M19) AbD4_RS09995 PF13091 PLD-like domain AbD4_RS10010 PF00199 Catalase AbD4_RS10020 PF08240 Alcohol dehydrogenase GroES-like domain AbD4_RS10020 PF00107 Zinc-binding dehydrogenase AbD4_RS10035 PF00419 Fimbrial protein AbD4_RS10040 PF13953 PapC C-terminal domain AbD4_RS10040 PF00577 Outer membrane usher protein AbD4_RS10040 PF13954 PapC N-terminal domain AbD4_RS10045 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AbD4_RS10045 PF02753 Pili assembly chaperone PapD, C-terminal domain AbD4_RS10050 PF16970 Type-1 fimbrial protein, A AbD4_RS10070 PF00296 Luciferase-like monooxygenase AbD4_RS10075 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AbD4_RS10080 PF00528 Binding-protein-dependent transport system inner membrane component AbD4_RS10085 PF00528 Binding-protein-dependent transport system inner membrane component AbD4_RS10085 PF12911 N-terminal TM domain of oligopeptide transport permease C AbD4_RS10090 PF00005 ABC transporter AbD4_RS10090 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AbD4_RS10095 PF02770 Acyl-CoA dehydrogenase, middle domain AbD4_RS10095 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AbD4_RS10095 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AbD4_RS10105 PF00664 ABC transporter transmembrane region AbD4_RS10105 PF00005 ABC transporter AbD4_RS10110 PF00005 ABC transporter AbD4_RS10110 PF00664 ABC transporter transmembrane region AbD4_RS10120 PF07715 TonB-dependent Receptor Plug Domain AbD4_RS10120 PF00593 TonB dependent receptor AbD4_RS10130 PF00296 Luciferase-like monooxygenase AbD4_RS10135 PF00158 Sigma-54 interaction domain AbD4_RS10140 PF00902 Sec-independent protein translocase protein (TatC) AbD4_RS10145 PF02416 mttA/Hcf106 family AbD4_RS10150 PF02416 mttA/Hcf106 family AbD4_RS10155 PF00005 ABC transporter AbD4_RS10165 PF00528 Binding-protein-dependent transport system inner membrane component AbD4_RS10170 PF09084 NMT1/THI5 like AbD4_RS10175 PF00296 Luciferase-like monooxygenase AbD4_RS10180 PF03544 Gram-negative bacterial TonB protein C-terminal AbD4_RS10185 PF01618 MotA/TolQ/ExbB proton channel family AbD4_RS10190 PF02472 Biopolymer transport protein ExbD/TolR AbD4_RS10195 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AbD4_RS10205 PF07715 TonB-dependent Receptor Plug Domain AbD4_RS10205 PF00593 TonB dependent receptor AbD4_RS10210 PF00296 Luciferase-like monooxygenase AbD4_RS10215 PF17760 UvrA interaction domain AbD4_RS10215 PF17755 UvrA DNA-binding domain AbD4_RS10215 PF00005 ABC transporter AbD4_RS10220 PF00873 AcrB/AcrD/AcrF family AbD4_RS10225 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AbD4_RS10225 PF00529 HlyD membrane-fusion protein of T1SS AbD4_RS10230 PF00486 Transcriptional regulatory protein, C terminal AbD4_RS10230 PF00072 Response regulator receiver domain AbD4_RS10235 PF00512 His Kinase A (phospho-acceptor) domain AbD4_RS10235 PF16527 Two-component sensor protein CpxA, periplasmic domain AbD4_RS10235 PF00672 HAMP domain AbD4_RS10235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AbD4_RS10245 PF02311 AraC-like ligand binding domain AbD4_RS10245 PF12833 Helix-turn-helix domain AbD4_RS10250 PF12146 Serine aminopeptidase, S33 AbD4_RS10275 PF03050 Transposase IS66 family AbD4_RS10275 PF13817 IS66 C-terminal element AbD4_RS10275 PF13007 Transposase C of IS166 homeodomain AbD4_RS10275 PF13005 zinc-finger binding domain of transposase IS66 AbD4_RS10305 PF13291 ACT domain AbD4_RS10305 PF04607 Region found in RelA / SpoT proteins AbD4_RS10305 PF02824 TGS domain AbD4_RS10315 PF01975 Survival protein SurE AbD4_RS10340 PF07690 Major Facilitator Superfamily AbD4_RS10345 PF13533 Biotin-lipoyl like AbD4_RS10360 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AbD4_RS10365 PF14572 Phosphoribosyl synthetase-associated domain AbD4_RS10365 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AbD4_RS10385 PF00005 ABC transporter AbD4_RS10400 PF08240 Alcohol dehydrogenase GroES-like domain AbD4_RS10400 PF00107 Zinc-binding dehydrogenase AbD4_RS10415 PF12833 Helix-turn-helix domain AbD4_RS10415 PF06719 AraC-type transcriptional regulator N-terminus AbD4_RS10420 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AbD4_RS10420 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AbD4_RS10425 PF07690 Major Facilitator Superfamily AbD4_RS10430 PF01370 NAD dependent epimerase/dehydratase family AbD4_RS10435 PF03466 LysR substrate binding domain AbD4_RS10435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS10445 PF00920 Dehydratase family AbD4_RS10450 PF00171 Aldehyde dehydrogenase family AbD4_RS10465 PF00529 HlyD membrane-fusion protein of T1SS AbD4_RS10465 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AbD4_RS10475 PF07690 Major Facilitator Superfamily AbD4_RS10480 PF01557 Fumarylacetoacetate (FAA) hydrolase family AbD4_RS10485 PF13417 Glutathione S-transferase, N-terminal domain AbD4_RS10490 PF01494 FAD binding domain AbD4_RS10495 PF07883 Cupin domain AbD4_RS10500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS10500 PF03466 LysR substrate binding domain AbD4_RS10515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS10515 PF03466 LysR substrate binding domain AbD4_RS10525 PF08450 SMP-30/Gluconolactonase/LRE-like region AbD4_RS10530 PF07702 UTRA domain AbD4_RS10530 PF00392 Bacterial regulatory proteins, gntR family AbD4_RS10540 PF04909 Amidohydrolase AbD4_RS10545 PF07690 Major Facilitator Superfamily AbD4_RS10570 PF13360 PQQ-like domain AbD4_RS10575 PF01638 HxlR-like helix-turn-helix AbD4_RS10580 PF08240 Alcohol dehydrogenase GroES-like domain AbD4_RS10580 PF00107 Zinc-binding dehydrogenase AbD4_RS10585 PF00043 Glutathione S-transferase, C-terminal domain AbD4_RS10585 PF02798 Glutathione S-transferase, N-terminal domain AbD4_RS10590 PF07681 DoxX AbD4_RS10595 PF02525 Flavodoxin-like fold AbD4_RS10600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS10600 PF03466 LysR substrate binding domain AbD4_RS10610 PF13005 zinc-finger binding domain of transposase IS66 AbD4_RS10610 PF13007 Transposase C of IS166 homeodomain AbD4_RS10610 PF13817 IS66 C-terminal element AbD4_RS10610 PF03050 Transposase IS66 family AbD4_RS10645 PF03050 Transposase IS66 family AbD4_RS10645 PF13817 IS66 C-terminal element AbD4_RS10645 PF13007 Transposase C of IS166 homeodomain AbD4_RS10645 PF13005 zinc-finger binding domain of transposase IS66 AbD4_RS10675 PF00440 Bacterial regulatory proteins, tetR family AbD4_RS10675 PF08359 YsiA-like protein, C-terminal region AbD4_RS10680 PF12706 Beta-lactamase superfamily domain AbD4_RS10690 PF07992 Pyridine nucleotide-disulphide oxidoreductase AbD4_RS10700 PF00376 MerR family regulatory protein AbD4_RS10700 PF09278 MerR, DNA binding AbD4_RS10705 PF01872 RibD C-terminal domain AbD4_RS10710 PF00106 short chain dehydrogenase AbD4_RS10715 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AbD4_RS10715 PF07992 Pyridine nucleotide-disulphide oxidoreductase AbD4_RS10720 PF01047 MarR family AbD4_RS10725 PF07859 alpha/beta hydrolase fold AbD4_RS10740 PF06628 Catalase-related immune-responsive AbD4_RS10740 PF00199 Catalase AbD4_RS10745 PF00561 alpha/beta hydrolase fold AbD4_RS10755 PF00171 Aldehyde dehydrogenase family AbD4_RS10760 PF00107 Zinc-binding dehydrogenase AbD4_RS10760 PF08240 Alcohol dehydrogenase GroES-like domain AbD4_RS10765 PF00474 Sodium:solute symporter family AbD4_RS10770 PF04341 Protein of unknown function, DUF485 AbD4_RS10775 PF13193 AMP-binding enzyme C-terminal domain AbD4_RS10775 PF00501 AMP-binding enzyme AbD4_RS10780 PF02954 Bacterial regulatory protein, Fis family AbD4_RS10780 PF00158 Sigma-54 interaction domain AbD4_RS10780 PF06506 Propionate catabolism activator AbD4_RS10790 PF02770 Acyl-CoA dehydrogenase, middle domain AbD4_RS10790 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AbD4_RS10790 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AbD4_RS10805 PF01636 Phosphotransferase enzyme family AbD4_RS10810 PF00171 Aldehyde dehydrogenase family AbD4_RS10820 PF07690 Major Facilitator Superfamily AbD4_RS10825 PF00920 Dehydratase family AbD4_RS10830 PF00392 Bacterial regulatory proteins, gntR family AbD4_RS10830 PF07729 FCD domain AbD4_RS10840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS10840 PF03466 LysR substrate binding domain AbD4_RS10845 PF13378 Enolase C-terminal domain-like AbD4_RS10845 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AbD4_RS10850 PF02426 Muconolactone delta-isomerase AbD4_RS10855 PF04444 Catechol dioxygenase N terminus AbD4_RS10855 PF00775 Dioxygenase AbD4_RS10860 PF01144 Coenzyme A transferase AbD4_RS10865 PF01144 Coenzyme A transferase AbD4_RS10870 PF00108 Thiolase, N-terminal domain AbD4_RS10870 PF02803 Thiolase, C-terminal domain AbD4_RS10875 PF12146 Serine aminopeptidase, S33 AbD4_RS10880 PF00171 Aldehyde dehydrogenase family AbD4_RS10890 PF01179 Copper amine oxidase, enzyme domain AbD4_RS10890 PF02727 Copper amine oxidase, N2 domain AbD4_RS10890 PF02728 Copper amine oxidase, N3 domain AbD4_RS10890 PF07833 Copper amine oxidase N-terminal domain AbD4_RS10895 PF02311 AraC-like ligand binding domain AbD4_RS10895 PF12833 Helix-turn-helix domain AbD4_RS10900 PF01613 Flavin reductase like domain AbD4_RS10905 PF00111 2Fe-2S iron-sulfur cluster binding domain AbD4_RS10905 PF00175 Oxidoreductase NAD-binding domain AbD4_RS10920 PF00355 Rieske [2Fe-2S] domain AbD4_RS10920 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AbD4_RS10935 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AbD4_RS10940 PF01425 Amidase AbD4_RS10950 PF07690 Major Facilitator Superfamily AbD4_RS10960 PF00106 short chain dehydrogenase AbD4_RS10975 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AbD4_RS10975 PF02770 Acyl-CoA dehydrogenase, middle domain AbD4_RS10975 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AbD4_RS10980 PF03466 LysR substrate binding domain AbD4_RS10980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS10985 PF09339 IclR helix-turn-helix domain AbD4_RS10985 PF01614 Bacterial transcriptional regulator AbD4_RS10990 PF00753 Metallo-beta-lactamase superfamily AbD4_RS11000 PF04143 Sulphur transport AbD4_RS11010 PF01011 PQQ enzyme repeat AbD4_RS11010 PF13360 PQQ-like domain AbD4_RS11015 PF04966 Carbohydrate-selective porin, OprB family AbD4_RS11020 PF05048 Periplasmic copper-binding protein (NosD) AbD4_RS11025 PF01487 Type I 3-dehydroquinase AbD4_RS11030 PF00775 Dioxygenase AbD4_RS11035 PF00775 Dioxygenase AbD4_RS11035 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal AbD4_RS11040 PF02627 Carboxymuconolactone decarboxylase family AbD4_RS11045 PF07690 Major Facilitator Superfamily AbD4_RS11050 PF00561 alpha/beta hydrolase fold AbD4_RS11055 PF00206 Lyase AbD4_RS11055 PF10397 Adenylosuccinate lyase C-terminus AbD4_RS11060 PF00108 Thiolase, N-terminal domain AbD4_RS11060 PF02803 Thiolase, C-terminal domain AbD4_RS11065 PF01144 Coenzyme A transferase AbD4_RS11070 PF01144 Coenzyme A transferase AbD4_RS11075 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AbD4_RS11080 PF04977 Septum formation initiator AbD4_RS11085 PF04239 Protein of unknown function (DUF421) AbD4_RS11090 PF03952 Enolase, N-terminal domain AbD4_RS11090 PF00113 Enolase, C-terminal TIM barrel domain AbD4_RS11095 PF00793 DAHP synthetase I family AbD4_RS11100 PF00117 Glutamine amidotransferase class-I AbD4_RS11100 PF06418 CTP synthase N-terminus AbD4_RS11115 PF03050 Transposase IS66 family AbD4_RS11115 PF13005 zinc-finger binding domain of transposase IS66 AbD4_RS11115 PF13007 Transposase C of IS166 homeodomain AbD4_RS11115 PF13817 IS66 C-terminal element AbD4_RS11160 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AbD4_RS11160 PF07992 Pyridine nucleotide-disulphide oxidoreductase AbD4_RS11175 PF00793 DAHP synthetase I family AbD4_RS11180 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AbD4_RS11185 PF10431 C-terminal, D2-small domain, of ClpB protein AbD4_RS11185 PF02861 Clp amino terminal domain, pathogenicity island component AbD4_RS11185 PF00004 ATPase family associated with various cellular activities (AAA) AbD4_RS11185 PF07724 AAA domain (Cdc48 subfamily) AbD4_RS11185 PF17871 AAA lid domain AbD4_RS11190 PF02617 ATP-dependent Clp protease adaptor protein ClpS AbD4_RS11200 PF01118 Semialdehyde dehydrogenase, NAD binding domain AbD4_RS11200 PF02774 Semialdehyde dehydrogenase, dimerisation domain AbD4_RS11215 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AbD4_RS11220 PF00291 Pyridoxal-phosphate dependent enzyme AbD4_RS11220 PF00585 C-terminal regulatory domain of Threonine dehydratase AbD4_RS11225 PF02254 TrkA-N domain AbD4_RS11225 PF02080 TrkA-C domain AbD4_RS11230 PF02386 Cation transport protein AbD4_RS11235 PF02253 Phospholipase A1 AbD4_RS11240 PF08367 Peptidase M16C associated AbD4_RS11240 PF00675 Insulinase (Peptidase family M16) AbD4_RS11240 PF05193 Peptidase M16 inactive domain AbD4_RS11245 PF00593 TonB dependent receptor AbD4_RS11245 PF07715 TonB-dependent Receptor Plug Domain AbD4_RS11250 PF00294 pfkB family carbohydrate kinase AbD4_RS11260 PF07290 Protein of unknown function (DUF1449) AbD4_RS11270 PF01654 Cytochrome bd terminal oxidase subunit I AbD4_RS11275 PF02322 Cytochrome bd terminal oxidase subunit II AbD4_RS11280 PF08173 Membrane bound YbgT-like protein AbD4_RS11290 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) AbD4_RS11300 PF00448 SRP54-type protein, GTPase domain AbD4_RS11300 PF02881 SRP54-type protein, helical bundle domain AbD4_RS11325 PF00478 IMP dehydrogenase / GMP reductase domain AbD4_RS11325 PF00571 CBS domain AbD4_RS11330 PF00202 Aminotransferase class-III AbD4_RS11335 PF00462 Glutaredoxin AbD4_RS11345 PF03466 LysR substrate binding domain AbD4_RS11345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS11350 PF00557 Metallopeptidase family M24 AbD4_RS11355 PF05525 Branched-chain amino acid transport protein AbD4_RS11380 PF03050 Transposase IS66 family AbD4_RS11380 PF13817 IS66 C-terminal element AbD4_RS11380 PF13005 zinc-finger binding domain of transposase IS66 AbD4_RS11380 PF13007 Transposase C of IS166 homeodomain AbD4_RS11395 PF00391 PEP-utilising enzyme, mobile domain AbD4_RS11395 PF05524 PEP-utilising enzyme, N-terminal AbD4_RS11395 PF02896 PEP-utilising enzyme, TIM barrel domain AbD4_RS11395 PF00381 PTS HPr component phosphorylation site AbD4_RS11395 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AbD4_RS11400 PF00294 pfkB family carbohydrate kinase AbD4_RS11405 PF02378 Phosphotransferase system, EIIC AbD4_RS11405 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AbD4_RS11420 PF00563 EAL domain AbD4_RS11420 PF00990 Diguanylate cyclase, GGDEF domain AbD4_RS11420 PF03707 Bacterial signalling protein N terminal repeat AbD4_RS11430 PF07995 Glucose / Sorbosone dehydrogenase AbD4_RS11435 PF02586 SOS response associated peptidase (SRAP) AbD4_RS11440 PF01740 STAS domain AbD4_RS11440 PF00916 Sulfate permease family AbD4_RS11445 PF05922 Peptidase inhibitor I9 AbD4_RS11445 PF00082 Subtilase family AbD4_RS11455 PF00324 Amino acid permease AbD4_RS11460 PF00266 Aminotransferase class-V AbD4_RS11465 PF01037 Lrp/AsnC ligand binding domain AbD4_RS11490 PF13419 Haloacid dehalogenase-like hydrolase AbD4_RS11495 PF01479 S4 domain AbD4_RS11500 PF00154 recA bacterial DNA recombination protein AbD4_RS11505 PF02631 RecX family AbD4_RS11520 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AbD4_RS11520 PF00132 Bacterial transferase hexapeptide (six repeats) AbD4_RS11525 PF07977 FabA-like domain AbD4_RS11530 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AbD4_RS11530 PF00132 Bacterial transferase hexapeptide (six repeats) AbD4_RS11540 PF07244 Surface antigen variable number repeat AbD4_RS11540 PF01103 Surface antigen AbD4_RS11545 PF17820 PDZ domain AbD4_RS11545 PF13180 PDZ domain AbD4_RS11545 PF02163 Peptidase family M50 AbD4_RS11550 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AbD4_RS11550 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AbD4_RS11550 PF13288 DXP reductoisomerase C-terminal domain AbD4_RS11560 PF01255 Putative undecaprenyl diphosphate synthase AbD4_RS11565 PF01765 Ribosome recycling factor AbD4_RS11570 PF00696 Amino acid kinase family AbD4_RS11575 PF04055 Radical SAM superfamily AbD4_RS11575 PF18693 TRAM domain AbD4_RS11575 PF00919 Uncharacterized protein family UPF0004 AbD4_RS11585 PF00989 PAS fold AbD4_RS11585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AbD4_RS11585 PF00512 His Kinase A (phospho-acceptor) domain AbD4_RS11590 PF02954 Bacterial regulatory protein, Fis family AbD4_RS11590 PF00072 Response regulator receiver domain AbD4_RS11590 PF00158 Sigma-54 interaction domain AbD4_RS11595 PF00440 Bacterial regulatory proteins, tetR family AbD4_RS11600 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AbD4_RS11600 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AbD4_RS11610 PF02542 YgbB family AbD4_RS11620 PF01266 FAD dependent oxidoreductase AbD4_RS11640 PF10415 Fumarase C C-terminus AbD4_RS11640 PF00206 Lyase AbD4_RS11645 PF16363 GDP-mannose 4,6 dehydratase AbD4_RS11650 PF02635 DsrE/DsrF-like family AbD4_RS11670 PF00892 EamA-like transporter family AbD4_RS11675 PF00392 Bacterial regulatory proteins, gntR family AbD4_RS11675 PF00155 Aminotransferase class I and II AbD4_RS11680 PF01638 HxlR-like helix-turn-helix AbD4_RS11685 PF00994 Probable molybdopterin binding domain AbD4_RS11685 PF03454 MoeA C-terminal region (domain IV) AbD4_RS11685 PF03453 MoeA N-terminal region (domain I and II) AbD4_RS11690 PF01967 MoaC family AbD4_RS11690 PF00994 Probable molybdopterin binding domain AbD4_RS11695 PF02391 MoaE protein AbD4_RS11705 PF04055 Radical SAM superfamily AbD4_RS11705 PF06463 Molybdenum Cofactor Synthesis C AbD4_RS11710 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AbD4_RS11710 PF00384 Molybdopterin oxidoreductase AbD4_RS11710 PF01568 Molydopterin dinucleotide binding domain AbD4_RS11715 PF12804 MobA-like NTP transferase domain AbD4_RS11720 PF04324 BFD-like [2Fe-2S] binding domain AbD4_RS11720 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AbD4_RS11720 PF01568 Molydopterin dinucleotide binding domain AbD4_RS11720 PF00384 Molybdopterin oxidoreductase AbD4_RS11725 PF18267 Rubredoxin NAD+ reductase C-terminal domain AbD4_RS11725 PF04324 BFD-like [2Fe-2S] binding domain AbD4_RS11725 PF07992 Pyridine nucleotide-disulphide oxidoreductase AbD4_RS11725 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AbD4_RS11725 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AbD4_RS11730 PF18267 Rubredoxin NAD+ reductase C-terminal domain AbD4_RS11730 PF13806 Rieske-like [2Fe-2S] domain AbD4_RS11730 PF04324 BFD-like [2Fe-2S] binding domain AbD4_RS11730 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AbD4_RS11730 PF07992 Pyridine nucleotide-disulphide oxidoreductase AbD4_RS11730 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AbD4_RS11740 PF00486 Transcriptional regulatory protein, C terminal AbD4_RS11740 PF00072 Response regulator receiver domain AbD4_RS11745 PF00005 ABC transporter AbD4_RS11755 PF00817 impB/mucB/samB family AbD4_RS11755 PF11799 impB/mucB/samB family C-terminal domain AbD4_RS11755 PF13438 Domain of unknown function (DUF4113) AbD4_RS11760 PF01220 Dehydroquinase class II AbD4_RS11765 PF00364 Biotin-requiring enzyme AbD4_RS11770 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AbD4_RS11770 PF00289 Biotin carboxylase, N-terminal domain AbD4_RS11770 PF02785 Biotin carboxylase C-terminal domain AbD4_RS11780 PF12832 MFS_1 like family AbD4_RS11855 PF05154 TM2 domain AbD4_RS11925 PF09979 Uncharacterized protein conserved in bacteria (DUF2213) AbD4_RS11945 PF06381 Protein of unknown function (DUF1073) AbD4_RS12035 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT AbD4_RS12040 PF01726 LexA DNA binding domain AbD4_RS12040 PF00717 Peptidase S24-like AbD4_RS12115 PF01645 Conserved region in glutamate synthase AbD4_RS12130 PF01565 FAD binding domain AbD4_RS12130 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AbD4_RS12135 PF01451 Low molecular weight phosphotyrosine protein phosphatase AbD4_RS12145 PF00465 Iron-containing alcohol dehydrogenase AbD4_RS12150 PF03061 Thioesterase superfamily AbD4_RS12155 PF04185 Phosphoesterase family AbD4_RS12155 PF05506 Domain of unknown function (DUF756) AbD4_RS12160 PF12169 DNA polymerase III subunits gamma and tau domain III AbD4_RS12160 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AbD4_RS12160 PF12170 DNA polymerase III tau subunit V interacting with alpha AbD4_RS12175 PF07690 Major Facilitator Superfamily AbD4_RS12185 PF00144 Beta-lactamase AbD4_RS12190 PF01575 MaoC like domain AbD4_RS12200 PF02803 Thiolase, C-terminal domain AbD4_RS12200 PF00108 Thiolase, N-terminal domain AbD4_RS12210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS12210 PF03466 LysR substrate binding domain AbD4_RS12215 PF00923 Transaldolase/Fructose-6-phosphate aldolase AbD4_RS12220 PF01810 LysE type translocator AbD4_RS12225 PF01037 Lrp/AsnC ligand binding domain AbD4_RS12230 PF03594 Benzoate membrane transport protein AbD4_RS12235 PF02308 MgtC family AbD4_RS12240 PF00689 Cation transporting ATPase, C-terminus AbD4_RS12240 PF00690 Cation transporter/ATPase, N-terminus AbD4_RS12265 PF00582 Universal stress protein family AbD4_RS12270 PF00005 ABC transporter AbD4_RS12270 PF12848 ABC transporter AbD4_RS12290 PF00593 TonB dependent receptor AbD4_RS12290 PF07715 TonB-dependent Receptor Plug Domain AbD4_RS12320 PF00924 Mechanosensitive ion channel AbD4_RS12325 PF07715 TonB-dependent Receptor Plug Domain AbD4_RS12325 PF00593 TonB dependent receptor AbD4_RS12355 PF01494 FAD binding domain AbD4_RS12360 PF03466 LysR substrate binding domain AbD4_RS12360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS12365 PF07690 Major Facilitator Superfamily AbD4_RS12370 PF07690 Major Facilitator Superfamily AbD4_RS12375 PF14759 Reductase C-terminal AbD4_RS12375 PF07992 Pyridine nucleotide-disulphide oxidoreductase AbD4_RS12380 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AbD4_RS12385 PF00106 short chain dehydrogenase AbD4_RS12390 PF00355 Rieske [2Fe-2S] domain AbD4_RS12395 PF00866 Ring hydroxylating beta subunit AbD4_RS12400 PF00355 Rieske [2Fe-2S] domain AbD4_RS12400 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AbD4_RS12405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS12405 PF03466 LysR substrate binding domain AbD4_RS12410 PF00561 alpha/beta hydrolase fold AbD4_RS12415 PF03573 outer membrane porin, OprD family AbD4_RS12420 PF07836 DmpG-like communication domain AbD4_RS12420 PF00682 HMGL-like AbD4_RS12425 PF01118 Semialdehyde dehydrogenase, NAD binding domain AbD4_RS12425 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation AbD4_RS12430 PF01557 Fumarylacetoacetate (FAA) hydrolase family AbD4_RS12440 PF07690 Major Facilitator Superfamily AbD4_RS12445 PF12706 Beta-lactamase superfamily domain AbD4_RS12465 PF03050 Transposase IS66 family AbD4_RS12465 PF13817 IS66 C-terminal element AbD4_RS12465 PF13007 Transposase C of IS166 homeodomain AbD4_RS12465 PF13005 zinc-finger binding domain of transposase IS66 AbD4_RS12475 PF02656 Domain of unknown function (DUF202) AbD4_RS12490 PF03412 Peptidase C39 family AbD4_RS12490 PF00005 ABC transporter AbD4_RS12490 PF00664 ABC transporter transmembrane region AbD4_RS12495 PF03050 Transposase IS66 family AbD4_RS12495 PF13007 Transposase C of IS166 homeodomain AbD4_RS12495 PF13817 IS66 C-terminal element AbD4_RS12495 PF13005 zinc-finger binding domain of transposase IS66 AbD4_RS12520 PF03050 Transposase IS66 family AbD4_RS12520 PF13817 IS66 C-terminal element AbD4_RS12520 PF13007 Transposase C of IS166 homeodomain AbD4_RS12520 PF13005 zinc-finger binding domain of transposase IS66 AbD4_RS12525 PF02321 Outer membrane efflux protein AbD4_RS12545 PF01389 OmpA-like transmembrane domain AbD4_RS12545 PF00691 OmpA family AbD4_RS12565 PF00691 OmpA family AbD4_RS12565 PF01389 OmpA-like transmembrane domain AbD4_RS12570 PF13018 Extended Signal Peptide of Type V secretion system AbD4_RS12570 PF03895 YadA-like membrane anchor domain AbD4_RS12570 PF05658 Head domain of trimeric autotransporter adhesin AbD4_RS12570 PF05662 Coiled stalk of trimeric autotransporter adhesin AbD4_RS12585 PF01037 Lrp/AsnC ligand binding domain AbD4_RS12590 PF01817 Chorismate mutase type II AbD4_RS12610 PF11940 Domain of unknown function (DUF3458) Ig-like fold AbD4_RS12610 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AbD4_RS12610 PF01433 Peptidase family M1 domain AbD4_RS12625 PF02110 Hydroxyethylthiazole kinase family AbD4_RS12630 PF06445 GyrI-like small molecule binding domain AbD4_RS12640 PF05970 PIF1-like helicase AbD4_RS12640 PF14493 Helix-turn-helix domain AbD4_RS12645 PF00465 Iron-containing alcohol dehydrogenase AbD4_RS12660 PF00171 Aldehyde dehydrogenase family AbD4_RS12665 PF13520 Amino acid permease AbD4_RS12670 PF06751 Ethanolamine ammonia lyase large subunit (EutB) AbD4_RS12675 PF05985 Ethanolamine ammonia-lyase light chain (EutC) AbD4_RS12680 PF00117 Glutamine amidotransferase class-I AbD4_RS12680 PF00958 GMP synthase C terminal domain AbD4_RS12680 PF02540 NAD synthase AbD4_RS12685 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AbD4_RS12685 PF00749 tRNA synthetases class I (E and Q), catalytic domain AbD4_RS12690 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AbD4_RS12695 PF00149 Calcineurin-like phosphoesterase AbD4_RS12705 PF00881 Nitroreductase family AbD4_RS12715 PF17209 Hfq protein AbD4_RS12725 PF08676 MutL C terminal dimerisation domain AbD4_RS12725 PF01119 DNA mismatch repair protein, C-terminal domain AbD4_RS12730 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AbD4_RS12735 PF00849 RNA pseudouridylate synthase AbD4_RS12735 PF01479 S4 domain AbD4_RS12750 PF00849 RNA pseudouridylate synthase AbD4_RS12750 PF01479 S4 domain AbD4_RS12760 PF04284 Protein of unknown function (DUF441) AbD4_RS12765 PF03466 LysR substrate binding domain AbD4_RS12765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS12780 PF07690 Major Facilitator Superfamily AbD4_RS12785 PF00027 Cyclic nucleotide-binding domain AbD4_RS12785 PF00520 Ion transport protein AbD4_RS12795 PF00330 Aconitase family (aconitate hydratase) AbD4_RS12795 PF06434 Aconitate hydratase 2 N-terminus AbD4_RS12795 PF11791 Aconitate B N-terminal domain AbD4_RS12810 PF17243 POTRA domain TamA domain 1 AbD4_RS12810 PF07244 Surface antigen variable number repeat AbD4_RS12810 PF01103 Surface antigen AbD4_RS12815 PF07690 Major Facilitator Superfamily AbD4_RS12820 PF03232 Ubiquinone biosynthesis protein COQ7 AbD4_RS12830 PF00120 Glutamine synthetase, catalytic domain AbD4_RS12835 PF00072 Response regulator receiver domain AbD4_RS12835 PF00486 Transcriptional regulatory protein, C terminal AbD4_RS12840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AbD4_RS12840 PF00512 His Kinase A (phospho-acceptor) domain AbD4_RS12840 PF02702 Osmosensitive K+ channel His kinase sensor domain AbD4_RS12840 PF13493 Domain of unknown function (DUF4118) AbD4_RS12845 PF02669 K+-transporting ATPase, c chain AbD4_RS12870 PF03109 ABC1 family AbD4_RS12875 PF00899 ThiF family AbD4_RS12880 PF01613 Flavin reductase like domain AbD4_RS12885 PF13193 AMP-binding enzyme C-terminal domain AbD4_RS12885 PF00501 AMP-binding enzyme AbD4_RS12890 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AbD4_RS12890 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AbD4_RS12890 PF02770 Acyl-CoA dehydrogenase, middle domain AbD4_RS12895 PF00106 short chain dehydrogenase AbD4_RS12900 PF12833 Helix-turn-helix domain AbD4_RS12905 PF17827 PrmC N-terminal domain AbD4_RS12905 PF13847 Methyltransferase domain AbD4_RS12910 PF03462 PCRF domain AbD4_RS12910 PF00472 RF-1 domain AbD4_RS12920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS12920 PF03466 LysR substrate binding domain AbD4_RS12935 PF00296 Luciferase-like monooxygenase AbD4_RS12945 PF13994 PgaD-like protein AbD4_RS12950 PF00535 Glycosyl transferase family 2 AbD4_RS12955 PF01522 Polysaccharide deacetylase AbD4_RS12955 PF14883 Hypothetical glycosyl hydrolase family 13 AbD4_RS12975 PF13005 zinc-finger binding domain of transposase IS66 AbD4_RS12975 PF13007 Transposase C of IS166 homeodomain AbD4_RS12975 PF13817 IS66 C-terminal element AbD4_RS12975 PF03050 Transposase IS66 family AbD4_RS12985 PF03618 Kinase/pyrophosphorylase AbD4_RS12990 PF02896 PEP-utilising enzyme, TIM barrel domain AbD4_RS12990 PF00391 PEP-utilising enzyme, mobile domain AbD4_RS12990 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AbD4_RS13000 PF06481 COX Aromatic Rich Motif AbD4_RS13000 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AbD4_RS13005 PF00115 Cytochrome C and Quinol oxidase polypeptide I AbD4_RS13010 PF00510 Cytochrome c oxidase subunit III AbD4_RS13015 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AbD4_RS13020 PF01040 UbiA prenyltransferase family AbD4_RS13025 PF01250 Ribosomal protein S6 AbD4_RS13030 PF01084 Ribosomal protein S18 AbD4_RS13035 PF01281 Ribosomal protein L9, N-terminal domain AbD4_RS13035 PF03948 Ribosomal protein L9, C-terminal domain AbD4_RS13040 PF03796 DnaB-like helicase C terminal domain AbD4_RS13040 PF00772 DnaB-like helicase N terminal domain AbD4_RS13045 PF01168 Alanine racemase, N-terminal domain AbD4_RS13045 PF00842 Alanine racemase, C-terminal domain AbD4_RS13055 PF08379 Bacterial transglutaminase-like N-terminal region AbD4_RS13055 PF01841 Transglutaminase-like superfamily AbD4_RS13065 PF14403 Circularly permuted ATP-grasp type 2 AbD4_RS13075 PF01134 Glucose inhibited division protein A AbD4_RS13075 PF13932 GidA associated domain AbD4_RS13095 PF02954 Bacterial regulatory protein, Fis family AbD4_RS13100 PF02142 MGS-like domain AbD4_RS13100 PF01808 AICARFT/IMPCHase bienzyme AbD4_RS13105 PF02844 Phosphoribosylglycinamide synthetase, N domain AbD4_RS13105 PF02843 Phosphoribosylglycinamide synthetase, C domain AbD4_RS13105 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AbD4_RS13110 PF03180 NLPA lipoprotein AbD4_RS13115 PF00005 ABC transporter AbD4_RS13115 PF09383 NIL domain AbD4_RS13120 PF00528 Binding-protein-dependent transport system inner membrane component AbD4_RS13125 PF00753 Metallo-beta-lactamase superfamily AbD4_RS13125 PF16123 Hydroxyacylglutathione hydrolase C-terminus AbD4_RS13150 PF13817 IS66 C-terminal element AbD4_RS13150 PF13007 Transposase C of IS166 homeodomain AbD4_RS13150 PF13005 zinc-finger binding domain of transposase IS66 AbD4_RS13150 PF03050 Transposase IS66 family AbD4_RS13175 PF03466 LysR substrate binding domain AbD4_RS13175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS13180 PF07690 Major Facilitator Superfamily AbD4_RS13185 PF01494 FAD binding domain AbD4_RS13195 PF17932 Tetracyclin repressor-like, C-terminal domain AbD4_RS13195 PF00440 Bacterial regulatory proteins, tetR family AbD4_RS13205 PF07995 Glucose / Sorbosone dehydrogenase AbD4_RS13210 PF00892 EamA-like transporter family AbD4_RS13215 PF01177 Asp/Glu/Hydantoin racemase AbD4_RS13220 PF00085 Thioredoxin AbD4_RS13220 PF07992 Pyridine nucleotide-disulphide oxidoreductase AbD4_RS13235 PF02470 MlaD protein AbD4_RS13240 PF04403 Paraquat-inducible protein A AbD4_RS13270 PF00293 NUDIX domain AbD4_RS13275 PF00083 Sugar (and other) transporter AbD4_RS13275 PF08946 Osmosensory transporter coiled coil AbD4_RS13325 PF07729 FCD domain AbD4_RS13325 PF00392 Bacterial regulatory proteins, gntR family AbD4_RS13335 PF03616 Sodium/glutamate symporter AbD4_RS13340 PF00561 alpha/beta hydrolase fold AbD4_RS13365 PF04076 Bacterial OB fold (BOF) protein AbD4_RS13375 PF13649 Methyltransferase domain AbD4_RS13395 PF00324 Amino acid permease AbD4_RS13400 PF00171 Aldehyde dehydrogenase family AbD4_RS13405 PF00202 Aminotransferase class-III AbD4_RS13410 PF03466 LysR substrate binding domain AbD4_RS13410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS13450 PF13018 Extended Signal Peptide of Type V secretion system AbD4_RS13450 PF13332 Hemagglutinin repeat AbD4_RS13450 PF05860 haemagglutination activity domain AbD4_RS13450 PF04829 Pre-toxin domain with VENN motif AbD4_RS13450 PF13018 Extended Signal Peptide of Type V secretion system AbD4_RS13450 PF13332 Hemagglutinin repeat AbD4_RS13450 PF05860 haemagglutination activity domain AbD4_RS13450 PF04829 Pre-toxin domain with VENN motif AbD4_RS13455 PF08479 POTRA domain, ShlB-type AbD4_RS13455 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AbD4_RS13455 PF17287 POTRA domain AbD4_RS13480 PF03793 PASTA domain AbD4_RS13480 PF00069 Protein kinase domain AbD4_RS13500 PF00814 Glycoprotease family AbD4_RS13505 PF01165 Ribosomal protein S21 AbD4_RS13510 PF09424 Yqey-like protein AbD4_RS13515 PF01435 Peptidase family M48 AbD4_RS13520 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AbD4_RS13520 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AbD4_RS13535 PF00156 Phosphoribosyl transferase domain AbD4_RS13540 PF02674 Colicin V production protein AbD4_RS13545 PF01180 Dihydroorotate dehydrogenase AbD4_RS13565 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AbD4_RS13565 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AbD4_RS13570 PF00881 Nitroreductase family AbD4_RS13580 PF00270 DEAD/DEAH box helicase AbD4_RS13580 PF00271 Helicase conserved C-terminal domain AbD4_RS13585 PF00313 'Cold-shock' DNA-binding domain AbD4_RS13595 PF04542 Sigma-70 region 2 AbD4_RS13595 PF04545 Sigma-70, region 4 AbD4_RS13595 PF00140 Sigma-70 factor, region 1.2 AbD4_RS13600 PF04241 Protein of unknown function (DUF423) AbD4_RS13610 PF05690 Thiazole biosynthesis protein ThiG AbD4_RS13620 PF03883 Peroxide stress protein YaaA AbD4_RS13630 PF00158 Sigma-54 interaction domain AbD4_RS13630 PF06956 Regulator of RNA terminal phosphate cyclase AbD4_RS13635 PF00753 Metallo-beta-lactamase superfamily AbD4_RS13640 PF01139 tRNA-splicing ligase RtcB AbD4_RS13655 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain AbD4_RS13655 PF01137 RNA 3'-terminal phosphate cyclase AbD4_RS13660 PF01546 Peptidase family M20/M25/M40 AbD4_RS13660 PF07687 Peptidase dimerisation domain AbD4_RS13670 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AbD4_RS13675 PF00800 Prephenate dehydratase AbD4_RS13675 PF01842 ACT domain AbD4_RS13675 PF01817 Chorismate mutase type II AbD4_RS13680 PF00756 Putative esterase AbD4_RS13685 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AbD4_RS13685 PF02770 Acyl-CoA dehydrogenase, middle domain AbD4_RS13685 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AbD4_RS13690 PF00375 Sodium:dicarboxylate symporter family AbD4_RS13695 PF02885 Glycosyl transferase family, helical bundle domain AbD4_RS13695 PF00591 Glycosyl transferase family, a/b domain AbD4_RS13700 PF07023 Protein of unknown function (DUF1315) AbD4_RS13705 PF01513 ATP-NAD kinase AbD4_RS13710 PF14814 Bifunctional transglycosylase second domain AbD4_RS13710 PF00905 Penicillin binding protein transpeptidase domain AbD4_RS13710 PF00912 Transglycosylase AbD4_RS13720 PF00293 NUDIX domain AbD4_RS13730 PF08521 Two-component sensor kinase N-terminal AbD4_RS13730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AbD4_RS13730 PF00512 His Kinase A (phospho-acceptor) domain AbD4_RS13735 PF00072 Response regulator receiver domain AbD4_RS13735 PF00486 Transcriptional regulatory protein, C terminal AbD4_RS13745 PF00437 Type II/IV secretion system protein AbD4_RS13745 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AbD4_RS13760 PF01980 tRNA-methyltransferase O AbD4_RS13760 PF18389 TrmO C-terminal domain AbD4_RS13765 PF00970 Oxidoreductase FAD-binding domain AbD4_RS13765 PF00175 Oxidoreductase NAD-binding domain AbD4_RS13770 PF02567 Phenazine biosynthesis-like protein AbD4_RS13775 PF00155 Aminotransferase class I and II AbD4_RS13775 PF00392 Bacterial regulatory proteins, gntR family AbD4_RS13780 PF16325 Peptidase family U32 C-terminal domain AbD4_RS13780 PF01136 Peptidase family U32 AbD4_RS13785 PF00037 4Fe-4S binding domain AbD4_RS13790 PF00893 Small Multidrug Resistance protein AbD4_RS13795 PF00005 ABC transporter AbD4_RS13800 PF00528 Binding-protein-dependent transport system inner membrane component AbD4_RS13805 PF00528 Binding-protein-dependent transport system inner membrane component AbD4_RS13810 PF00497 Bacterial extracellular solute-binding proteins, family 3 AbD4_RS13815 PF03466 LysR substrate binding domain AbD4_RS13815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS13820 PF13533 Biotin-lipoyl like AbD4_RS13825 PF00873 AcrB/AcrD/AcrF family AbD4_RS13830 PF02321 Outer membrane efflux protein AbD4_RS13835 PF00464 Serine hydroxymethyltransferase AbD4_RS14100 PF03796 DnaB-like helicase C terminal domain AbD4_RS14100 PF00772 DnaB-like helicase N terminal domain AbD4_RS14160 PF12684 PDDEXK-like domain of unknown function (DUF3799) AbD4_RS14160 PF06630 Enterobacterial exodeoxyribonuclease VIII AbD4_RS14205 PF00589 Phage integrase family AbD4_RS14210 PF00005 ABC transporter AbD4_RS14215 PF01061 ABC-2 type transporter AbD4_RS14220 PF14489 QueF-like protein AbD4_RS14220 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AbD4_RS14230 PF01098 Cell cycle protein AbD4_RS14235 PF13406 Transglycosylase SLT domain AbD4_RS14240 PF05036 Sporulation related domain AbD4_RS14240 PF03330 Lytic transglycolase AbD4_RS14270 PF13005 zinc-finger binding domain of transposase IS66 AbD4_RS14270 PF13007 Transposase C of IS166 homeodomain AbD4_RS14270 PF13817 IS66 C-terminal element AbD4_RS14270 PF03050 Transposase IS66 family AbD4_RS14280 PF12833 Helix-turn-helix domain AbD4_RS14290 PF00889 Elongation factor TS AbD4_RS14295 PF00318 Ribosomal protein S2 AbD4_RS14300 PF00557 Metallopeptidase family M24 AbD4_RS14310 PF07690 Major Facilitator Superfamily AbD4_RS14320 PF07992 Pyridine nucleotide-disulphide oxidoreductase AbD4_RS14320 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AbD4_RS14325 PF04055 Radical SAM superfamily AbD4_RS14330 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AbD4_RS14330 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AbD4_RS14330 PF09317 Domain of unknown function (DUF1974) AbD4_RS14345 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AbD4_RS14345 PF05221 S-adenosyl-L-homocysteine hydrolase AbD4_RS14350 PF02219 Methylenetetrahydrofolate reductase AbD4_RS14355 PF04452 RNA methyltransferase AbD4_RS14360 PF00563 EAL domain AbD4_RS14360 PF00990 Diguanylate cyclase, GGDEF domain AbD4_RS14360 PF03707 Bacterial signalling protein N terminal repeat AbD4_RS14365 PF01515 Phosphate acetyl/butaryl transferase AbD4_RS14365 PF00390 Malic enzyme, N-terminal domain AbD4_RS14365 PF03949 Malic enzyme, NAD binding domain AbD4_RS14370 PF01743 Poly A polymerase head domain AbD4_RS14370 PF12627 Probable RNA and SrmB- binding site of polymerase A AbD4_RS14375 PF13180 PDZ domain AbD4_RS14380 PF01784 NIF3 (NGG1p interacting factor 3) AbD4_RS14385 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AbD4_RS14385 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AbD4_RS14420 PF01040 UbiA prenyltransferase family AbD4_RS14425 PF04345 Chorismate lyase AbD4_RS14430 PF00120 Glutamine synthetase, catalytic domain AbD4_RS14430 PF03951 Glutamine synthetase, beta-Grasp domain AbD4_RS14435 PF00854 POT family AbD4_RS14445 PF00117 Glutamine amidotransferase class-I AbD4_RS14450 PF11838 ERAP1-like C-terminal domain AbD4_RS14450 PF01433 Peptidase family M1 domain AbD4_RS14455 PF07715 TonB-dependent Receptor Plug Domain AbD4_RS14455 PF00593 TonB dependent receptor AbD4_RS14460 PF02885 Glycosyl transferase family, helical bundle domain AbD4_RS14460 PF00591 Glycosyl transferase family, a/b domain AbD4_RS14465 PF00218 Indole-3-glycerol phosphate synthase AbD4_RS14470 PF01713 Smr domain AbD4_RS14480 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AbD4_RS14480 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AbD4_RS14485 PF01799 [2Fe-2S] binding domain AbD4_RS14485 PF00111 2Fe-2S iron-sulfur cluster binding domain AbD4_RS14490 PF01227 GTP cyclohydrolase I AbD4_RS14495 PF00144 Beta-lactamase AbD4_RS14510 PF05675 Protein of unknown function (DUF817) AbD4_RS14515 PF01208 Uroporphyrinogen decarboxylase (URO-D) AbD4_RS14525 PF00425 chorismate binding enzyme AbD4_RS14530 PF17837 4'-phosphopantetheinyl transferase N-terminal domain AbD4_RS14530 PF01648 4'-phosphopantetheinyl transferase superfamily AbD4_RS14535 PF00975 Thioesterase domain AbD4_RS14540 PF00005 ABC transporter AbD4_RS14545 PF00005 ABC transporter AbD4_RS14550 PF00282 Pyridoxal-dependent decarboxylase conserved domain AbD4_RS14555 PF00550 Phosphopantetheine attachment site AbD4_RS14555 PF00857 Isochorismatase family AbD4_RS14560 PF13193 AMP-binding enzyme C-terminal domain AbD4_RS14560 PF00501 AMP-binding enzyme AbD4_RS14565 PF00501 AMP-binding enzyme AbD4_RS14565 PF00668 Condensation domain AbD4_RS14565 PF00550 Phosphopantetheine attachment site AbD4_RS14570 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AbD4_RS14575 PF07715 TonB-dependent Receptor Plug Domain AbD4_RS14575 PF00593 TonB dependent receptor AbD4_RS14580 PF01497 Periplasmic binding protein AbD4_RS14585 PF00005 ABC transporter AbD4_RS14590 PF01032 FecCD transport family AbD4_RS14595 PF01032 FecCD transport family AbD4_RS14600 PF13193 AMP-binding enzyme C-terminal domain AbD4_RS14600 PF00668 Condensation domain AbD4_RS14600 PF00550 Phosphopantetheine attachment site AbD4_RS14600 PF00975 Thioesterase domain AbD4_RS14600 PF00501 AMP-binding enzyme AbD4_RS14605 PF00501 AMP-binding enzyme AbD4_RS14605 PF13193 AMP-binding enzyme C-terminal domain AbD4_RS14605 PF00668 Condensation domain AbD4_RS14605 PF00550 Phosphopantetheine attachment site AbD4_RS14615 PF13309 HTH domain AbD4_RS14615 PF08348 YheO-like PAS domain AbD4_RS14620 PF00291 Pyridoxal-phosphate dependent enzyme AbD4_RS14625 PF17954 Quercetinase C-terminal cupin domain AbD4_RS14625 PF02678 Pirin AbD4_RS14665 PF04328 Selenoprotein, putative AbD4_RS14670 PF02554 Carbon starvation protein CstA AbD4_RS14670 PF13722 5TM C-terminal transporter carbon starvation CstA AbD4_RS14675 PF08207 Elongation factor P (EF-P) KOW-like domain AbD4_RS14675 PF09285 Elongation factor P, C-terminal AbD4_RS14675 PF01132 Elongation factor P (EF-P) OB domain AbD4_RS14680 PF04055 Radical SAM superfamily AbD4_RS14690 PF12792 CSS motif domain associated with EAL AbD4_RS14690 PF00563 EAL domain AbD4_RS14695 PF01197 Ribosomal protein L31 AbD4_RS14700 PF13593 SBF-like CPA transporter family (DUF4137) AbD4_RS14705 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AbD4_RS14710 PF07690 Major Facilitator Superfamily AbD4_RS14715 PF13654 AAA domain AbD4_RS14715 PF05362 Lon protease (S16) C-terminal proteolytic domain AbD4_RS14720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS14720 PF03466 LysR substrate binding domain AbD4_RS14725 PF01551 Peptidase family M23 AbD4_RS14725 PF01476 LysM domain AbD4_RS14730 PF01975 Survival protein SurE AbD4_RS14745 PF07943 Penicillin-binding protein 5, C-terminal domain AbD4_RS14745 PF00768 D-alanyl-D-alanine carboxypeptidase AbD4_RS14750 PF00132 Bacterial transferase hexapeptide (six repeats) AbD4_RS14755 PF00293 NUDIX domain AbD4_RS14755 PF13344 Haloacid dehalogenase-like hydrolase AbD4_RS14765 PF04356 Protein of unknown function (DUF489) AbD4_RS14770 PF08328 Adenylosuccinate lyase C-terminal AbD4_RS14770 PF00206 Lyase AbD4_RS14785 PF01343 Peptidase family S49 AbD4_RS14785 PF08496 Peptidase family S49 N-terminal AbD4_RS14790 PF00005 ABC transporter AbD4_RS14795 PF00528 Binding-protein-dependent transport system inner membrane component AbD4_RS14800 PF00528 Binding-protein-dependent transport system inner membrane component AbD4_RS14805 PF12849 PBP superfamily domain AbD4_RS14810 PF00324 Amino acid permease AbD4_RS14815 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AbD4_RS14815 PF00205 Thiamine pyrophosphate enzyme, central domain AbD4_RS14815 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AbD4_RS14820 PF01037 Lrp/AsnC ligand binding domain AbD4_RS14825 PF00171 Aldehyde dehydrogenase family AbD4_RS14830 PF00282 Pyridoxal-dependent decarboxylase conserved domain AbD4_RS14835 PF00202 Aminotransferase class-III AbD4_RS14845 PF17754 MftR C-terminal domain AbD4_RS14845 PF00440 Bacterial regulatory proteins, tetR family AbD4_RS14855 PF00487 Fatty acid desaturase AbD4_RS14860 PF00970 Oxidoreductase FAD-binding domain AbD4_RS14860 PF00111 2Fe-2S iron-sulfur cluster binding domain AbD4_RS14860 PF00175 Oxidoreductase NAD-binding domain AbD4_RS14865 PF00440 Bacterial regulatory proteins, tetR family AbD4_RS14875 PF18339 RapA N-terminal Tudor like domain 1 AbD4_RS14875 PF00271 Helicase conserved C-terminal domain AbD4_RS14875 PF12137 RNA polymerase recycling family C-terminal AbD4_RS14875 PF00176 SNF2 family N-terminal domain AbD4_RS14875 PF18337 RapA N-terminal Tudor like domain AbD4_RS14880 PF00849 RNA pseudouridylate synthase AbD4_RS14890 PF00202 Aminotransferase class-III AbD4_RS14895 PF02581 Thiamine monophosphate synthase AbD4_RS14905 PF09615 CRISPR-associated protein (Cas_Csy3) AbD4_RS14910 PF09614 CRISPR-associated protein (Cas_Csy2) AbD4_RS14915 PF09611 CRISPR-associated protein (Cas_Csy1) AbD4_RS14925 PF01867 CRISPR associated protein Cas1 AbD4_RS14950 PF05193 Peptidase M16 inactive domain AbD4_RS14950 PF00675 Insulinase (Peptidase family M16) AbD4_RS14955 PF02567 Phenazine biosynthesis-like protein AbD4_RS14960 PF00375 Sodium:dicarboxylate symporter family AbD4_RS14965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS14965 PF03466 LysR substrate binding domain AbD4_RS14970 PF06779 Uncharacterised MFS-type transporter YbfB AbD4_RS14990 PF00180 Isocitrate/isopropylmalate dehydrogenase AbD4_RS14995 PF00849 RNA pseudouridylate synthase AbD4_RS15000 PF03971 Monomeric isocitrate dehydrogenase AbD4_RS15010 PF07943 Penicillin-binding protein 5, C-terminal domain AbD4_RS15010 PF00768 D-alanyl-D-alanine carboxypeptidase AbD4_RS15015 PF07992 Pyridine nucleotide-disulphide oxidoreductase AbD4_RS15020 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AbD4_RS15025 PF00875 DNA photolyase AbD4_RS15025 PF03441 FAD binding domain of DNA photolyase AbD4_RS15055 PF02350 UDP-N-acetylglucosamine 2-epimerase AbD4_RS15070 PF03060 Nitronate monooxygenase AbD4_RS15075 PF01207 Dihydrouridine synthase (Dus) AbD4_RS15080 PF07759 Protein of unknown function (DUF1615) AbD4_RS15090 PF00696 Amino acid kinase family AbD4_RS15090 PF01472 PUA domain AbD4_RS15095 PF01018 GTP1/OBG AbD4_RS15095 PF01926 50S ribosome-binding GTPase AbD4_RS15110 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AbD4_RS15110 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AbD4_RS15115 PF00892 EamA-like transporter family AbD4_RS15125 PF00271 Helicase conserved C-terminal domain AbD4_RS15125 PF02151 UvrB/uvrC motif AbD4_RS15125 PF12344 Ultra-violet resistance protein B AbD4_RS15125 PF17757 UvrB interaction domain AbD4_RS15125 PF04851 Type III restriction enzyme, res subunit AbD4_RS15135 PF00990 Diguanylate cyclase, GGDEF domain AbD4_RS15135 PF17151 Periplasmic sensor domain AbD4_RS15145 PF00155 Aminotransferase class I and II AbD4_RS15175 PF00106 short chain dehydrogenase AbD4_RS15180 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) AbD4_RS15185 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AbD4_RS15190 PF11967 Recombination protein O N terminal AbD4_RS15190 PF02565 Recombination protein O C terminal AbD4_RS15200 PF01926 50S ribosome-binding GTPase AbD4_RS15200 PF07650 KH domain AbD4_RS15205 PF14622 Ribonuclease-III-like AbD4_RS15205 PF00035 Double-stranded RNA binding motif AbD4_RS15215 PF10502 Signal peptidase, peptidase S26 AbD4_RS15220 PF06421 GTP-binding protein LepA C-terminus AbD4_RS15220 PF00009 Elongation factor Tu GTP binding domain AbD4_RS15220 PF00679 Elongation factor G C-terminus AbD4_RS15220 PF03144 Elongation factor Tu domain 2 AbD4_RS15230 PF13180 PDZ domain AbD4_RS15235 PF00890 FAD binding domain AbD4_RS15235 PF02910 Fumarate reductase flavoprotein C-term AbD4_RS15245 PF02223 Thymidylate kinase AbD4_RS15250 PF02618 YceG-like family AbD4_RS15255 PF01063 Amino-transferase class IV AbD4_RS15270 PF00528 Binding-protein-dependent transport system inner membrane component AbD4_RS15275 PF00528 Binding-protein-dependent transport system inner membrane component AbD4_RS15280 PF12857 TOBE-like domain AbD4_RS15280 PF00005 ABC transporter AbD4_RS15285 PF03466 LysR substrate binding domain AbD4_RS15285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS15295 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AbD4_RS15295 PF14602 Hexapeptide repeat of succinyl-transferase AbD4_RS15295 PF00132 Bacterial transferase hexapeptide (six repeats) AbD4_RS15305 PF06508 Queuosine biosynthesis protein QueC AbD4_RS15320 PF00578 AhpC/TSA family AbD4_RS15330 PF00293 NUDIX domain AbD4_RS15330 PF01467 Cytidylyltransferase-like AbD4_RS15335 PF00378 Enoyl-CoA hydratase/isomerase AbD4_RS15340 PF01784 NIF3 (NGG1p interacting factor 3) AbD4_RS15345 PF07690 Major Facilitator Superfamily AbD4_RS15350 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AbD4_RS15350 PF02769 AIR synthase related protein, C-terminal domain AbD4_RS15350 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AbD4_RS15355 PF01966 HD domain AbD4_RS15360 PF07499 RuvA, C-terminal domain AbD4_RS15360 PF01330 RuvA N terminal domain AbD4_RS15365 PF17864 RuvB AAA lid domain AbD4_RS15365 PF05491 RuvB C-terminal winged helix domain AbD4_RS15365 PF05496 Holliday junction DNA helicase RuvB P-loop domain AbD4_RS15370 PF07687 Peptidase dimerisation domain AbD4_RS15370 PF01546 Peptidase family M20/M25/M40 AbD4_RS15375 PF03061 Thioesterase superfamily AbD4_RS15380 PF01618 MotA/TolQ/ExbB proton channel family AbD4_RS15385 PF02472 Biopolymer transport protein ExbD/TolR AbD4_RS15395 PF07676 WD40-like Beta Propeller Repeat AbD4_RS15395 PF04052 TolB amino-terminal domain AbD4_RS15400 PF00691 OmpA family AbD4_RS15410 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AbD4_RS15415 PF00588 SpoU rRNA Methylase family AbD4_RS15415 PF08032 RNA 2'-O ribose methyltransferase substrate binding AbD4_RS15450 PF13007 Transposase C of IS166 homeodomain AbD4_RS15450 PF03050 Transposase IS66 family AbD4_RS15450 PF13817 IS66 C-terminal element AbD4_RS15450 PF13005 zinc-finger binding domain of transposase IS66 AbD4_RS15465 PF00308 Bacterial dnaA protein AbD4_RS15465 PF08299 Bacterial dnaA protein helix-turn-helix AbD4_RS15465 PF11638 DnaA N-terminal domain AbD4_RS15470 PF01594 AI-2E family transporter AbD4_RS15475 PF00586 AIR synthase related protein, N-terminal domain AbD4_RS15475 PF02769 AIR synthase related protein, C-terminal domain AbD4_RS15480 PF00551 Formyl transferase AbD4_RS15485 PF12697 Alpha/beta hydrolase family AbD4_RS15490 PF01343 Peptidase family S49 AbD4_RS15490 PF06965 Na+/H+ antiporter 1 AbD4_RS15500 PF00753 Metallo-beta-lactamase superfamily AbD4_RS15500 PF03772 Competence protein AbD4_RS15500 PF13567 Domain of unknown function (DUF4131) AbD4_RS15505 PF00005 ABC transporter AbD4_RS15510 PF12704 MacB-like periplasmic core domain AbD4_RS15510 PF02687 FtsX-like permease family AbD4_RS15520 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AbD4_RS15535 PF00266 Aminotransferase class-V AbD4_RS15545 PF13533 Biotin-lipoyl like AbD4_RS15565 PF00535 Glycosyl transferase family 2 AbD4_RS15580 PF03989 DNA gyrase C-terminal domain, beta-propeller AbD4_RS15580 PF00521 DNA gyrase/topoisomerase IV, subunit A AbD4_RS15585 PF01012 Electron transfer flavoprotein domain AbD4_RS15585 PF00766 Electron transfer flavoprotein FAD-binding domain AbD4_RS15590 PF01012 Electron transfer flavoprotein domain AbD4_RS15595 PF02899 Phage integrase, N-terminal SAM-like domain AbD4_RS15595 PF00589 Phage integrase family AbD4_RS15600 PF01810 LysE type translocator AbD4_RS15605 PF01678 Diaminopimelate epimerase AbD4_RS15610 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AbD4_RS15610 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AbD4_RS15620 PF00324 Amino acid permease AbD4_RS15625 PF18073 Rubredoxin metal binding domain AbD4_RS15635 PF00152 tRNA synthetases class II (D, K and N) AbD4_RS15640 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AbD4_RS15640 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AbD4_RS15640 PF11890 Domain of unknown function (DUF3410) AbD4_RS15645 PF06803 Protein of unknown function (DUF1232) AbD4_RS15650 PF02634 FdhD/NarQ family AbD4_RS15655 PF00384 Molybdopterin oxidoreductase AbD4_RS15660 PF02595 Glycerate kinase family AbD4_RS15675 PF00881 Nitroreductase family AbD4_RS15705 PF09857 Putative toxin of bacterial toxin-antitoxin pair AbD4_RS15715 PF00975 Thioesterase domain AbD4_RS15715 PF00550 Phosphopantetheine attachment site AbD4_RS15715 PF00668 Condensation domain AbD4_RS15715 PF13193 AMP-binding enzyme C-terminal domain AbD4_RS15715 PF00501 AMP-binding enzyme AbD4_RS15730 PF01272 Transcription elongation factor, GreA/GreB, C-term AbD4_RS15730 PF03449 Transcription elongation factor, N-terminal AbD4_RS15735 PF00497 Bacterial extracellular solute-binding proteins, family 3 AbD4_RS15735 PF01464 Transglycosylase SLT domain AbD4_RS15745 PF01171 PP-loop family AbD4_RS15750 PF01464 Transglycosylase SLT domain AbD4_RS15755 PF01435 Peptidase family M48 AbD4_RS15765 PF00873 AcrB/AcrD/AcrF family AbD4_RS15770 PF03009 Glycerophosphoryl diester phosphodiesterase family AbD4_RS15780 PF01219 Prokaryotic diacylglycerol kinase AbD4_RS15785 PF00118 TCP-1/cpn60 chaperonin family AbD4_RS15790 PF00166 Chaperonin 10 Kd subunit AbD4_RS15795 PF00149 Calcineurin-like phosphoesterase AbD4_RS15800 PF00781 Diacylglycerol kinase catalytic domain AbD4_RS15805 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain AbD4_RS15805 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain AbD4_RS15810 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AbD4_RS15810 PF01266 FAD dependent oxidoreductase AbD4_RS15815 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AbD4_RS15815 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AbD4_RS15820 PF00083 Sugar (and other) transporter AbD4_RS15835 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AbD4_RS15835 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AbD4_RS15850 PF09423 PhoD-like phosphatase AbD4_RS15850 PF16655 PhoD-like phosphatase, N-terminal domain AbD4_RS15870 PF00809 Pterin binding enzyme AbD4_RS15875 PF01434 Peptidase family M41 AbD4_RS15875 PF00004 ATPase family associated with various cellular activities (AAA) AbD4_RS15875 PF17862 AAA+ lid domain AbD4_RS15875 PF06480 FtsH Extracellular AbD4_RS15880 PF01728 FtsJ-like methyltransferase AbD4_RS15885 PF01985 CRS1 / YhbY (CRM) domain AbD4_RS15900 PF00117 Glutamine amidotransferase class-I AbD4_RS15900 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AbD4_RS15905 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AbD4_RS15905 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AbD4_RS15905 PF02142 MGS-like domain AbD4_RS15910 PF03449 Transcription elongation factor, N-terminal AbD4_RS15910 PF01272 Transcription elongation factor, GreA/GreB, C-term AbD4_RS15915 PF00132 Bacterial transferase hexapeptide (six repeats) AbD4_RS15920 PF00582 Universal stress protein family AbD4_RS15925 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AbD4_RS15935 PF09587 Bacterial capsule synthesis protein PGA_cap AbD4_RS15945 PF03050 Transposase IS66 family AbD4_RS15945 PF13005 zinc-finger binding domain of transposase IS66 AbD4_RS15945 PF13007 Transposase C of IS166 homeodomain AbD4_RS15945 PF13817 IS66 C-terminal element AbD4_RS15970 PF00999 Sodium/hydrogen exchanger family AbD4_RS15975 PF04228 Putative neutral zinc metallopeptidase AbD4_RS15980 PF05661 Protein of unknown function (DUF808) AbD4_RS15985 PF00579 tRNA synthetases class I (W and Y) AbD4_RS15990 PF02629 CoA binding domain AbD4_RS15990 PF00549 CoA-ligase AbD4_RS15995 PF08442 ATP-grasp domain AbD4_RS15995 PF00549 CoA-ligase AbD4_RS16000 PF07992 Pyridine nucleotide-disulphide oxidoreductase AbD4_RS16000 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AbD4_RS16005 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AbD4_RS16005 PF00364 Biotin-requiring enzyme AbD4_RS16005 PF02817 e3 binding domain AbD4_RS16010 PF02779 Transketolase, pyrimidine binding domain AbD4_RS16010 PF16870 2-oxoglutarate dehydrogenase C-terminal AbD4_RS16010 PF16078 2-oxoglutarate dehydrogenase N-terminus AbD4_RS16010 PF00676 Dehydrogenase E1 component AbD4_RS16025 PF13085 2Fe-2S iron-sulfur cluster binding domain AbD4_RS16030 PF00890 FAD binding domain AbD4_RS16030 PF02910 Fumarate reductase flavoprotein C-term AbD4_RS16035 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AbD4_RS16040 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AbD4_RS16045 PF00285 Citrate synthase, C-terminal domain AbD4_RS16055 PF17773 UPF0176 acylphosphatase like domain AbD4_RS16055 PF00581 Rhodanese-like domain AbD4_RS16070 PF00140 Sigma-70 factor, region 1.2 AbD4_RS16070 PF04546 Sigma-70, non-essential region AbD4_RS16070 PF04542 Sigma-70 region 2 AbD4_RS16070 PF04539 Sigma-70 region 3 AbD4_RS16070 PF04545 Sigma-70, region 4 AbD4_RS16070 PF03979 Sigma-70 factor, region 1.1 AbD4_RS16075 PF04359 Protein of unknown function (DUF493) AbD4_RS16080 PF03099 Biotin/lipoate A/B protein ligase family AbD4_RS16090 PF00465 Iron-containing alcohol dehydrogenase AbD4_RS16095 PF13520 Amino acid permease AbD4_RS16100 PF03358 NADPH-dependent FMN reductase AbD4_RS16105 PF01638 HxlR-like helix-turn-helix AbD4_RS16110 PF00588 SpoU rRNA Methylase family AbD4_RS16115 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AbD4_RS16115 PF10414 Sirohaem synthase dimerisation region AbD4_RS16115 PF14824 Sirohaem biosynthesis protein central AbD4_RS16120 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AbD4_RS16120 PF02403 Seryl-tRNA synthetase N-terminal domain AbD4_RS16130 PF03548 Outer membrane lipoprotein carrier protein LolA AbD4_RS16135 PF01016 Ribosomal L27 protein AbD4_RS16140 PF00829 Ribosomal prokaryotic L21 protein AbD4_RS16150 PF00348 Polyprenyl synthetase AbD4_RS16160 PF01569 PAP2 superfamily AbD4_RS16165 PF00529 HlyD membrane-fusion protein of T1SS AbD4_RS16165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AbD4_RS16170 PF00873 AcrB/AcrD/AcrF family AbD4_RS16175 PF02321 Outer membrane efflux protein AbD4_RS16180 PF01906 Putative heavy-metal-binding AbD4_RS16185 PF01906 Putative heavy-metal-binding AbD4_RS16205 PF08264 Anticodon-binding domain of tRNA AbD4_RS16205 PF00133 tRNA synthetases class I (I, L, M and V) AbD4_RS16205 PF10458 Valyl tRNA synthetase tRNA binding arm AbD4_RS16225 PF03466 LysR substrate binding domain AbD4_RS16225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS16230 PF00909 Ammonium Transporter Family AbD4_RS16240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AbD4_RS16240 PF00512 His Kinase A (phospho-acceptor) domain AbD4_RS16240 PF08521 Two-component sensor kinase N-terminal AbD4_RS16245 PF00072 Response regulator receiver domain AbD4_RS16245 PF00486 Transcriptional regulatory protein, C terminal AbD4_RS16265 PF13007 Transposase C of IS166 homeodomain AbD4_RS16265 PF13005 zinc-finger binding domain of transposase IS66 AbD4_RS16265 PF03050 Transposase IS66 family AbD4_RS16265 PF13817 IS66 C-terminal element AbD4_RS16285 PF01734 Patatin-like phospholipase AbD4_RS16295 PF01145 SPFH domain / Band 7 family AbD4_RS16300 PF04237 YjbR AbD4_RS16305 PF00348 Polyprenyl synthetase AbD4_RS16310 PF04303 PrpF protein AbD4_RS16315 PF00324 Amino acid permease AbD4_RS16325 PF01965 DJ-1/PfpI family AbD4_RS16330 PF00698 Acyl transferase domain AbD4_RS16330 PF14765 Polyketide synthase dehydratase AbD4_RS16330 PF08990 Erythronolide synthase docking AbD4_RS16330 PF09277 Erythronolide synthase, docking AbD4_RS16330 PF00550 Phosphopantetheine attachment site AbD4_RS16330 PF08659 KR domain AbD4_RS16330 PF08240 Alcohol dehydrogenase GroES-like domain AbD4_RS16330 PF16197 Ketoacyl-synthetase C-terminal extension AbD4_RS16330 PF00109 Beta-ketoacyl synthase, N-terminal domain AbD4_RS16330 PF02801 Beta-ketoacyl synthase, C-terminal domain AbD4_RS16335 PF12833 Helix-turn-helix domain AbD4_RS16335 PF06719 AraC-type transcriptional regulator N-terminus AbD4_RS16340 PF02673 Bacitracin resistance protein BacA AbD4_RS16360 PF02525 Flavodoxin-like fold AbD4_RS16375 PF01507 Phosphoadenosine phosphosulfate reductase family AbD4_RS16380 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain AbD4_RS16380 PF06974 Protein of unknown function (DUF1298) AbD4_RS16390 PF10150 Ribonuclease E/G family AbD4_RS16390 PF00575 S1 RNA binding domain AbD4_RS16395 PF02545 Maf-like protein AbD4_RS16400 PF04093 rod shape-determining protein MreD AbD4_RS16405 PF04085 rod shape-determining protein MreC AbD4_RS16415 PF02686 Glu-tRNAGln amidotransferase C subunit AbD4_RS16420 PF01425 Amidase AbD4_RS16425 PF02934 GatB/GatE catalytic domain AbD4_RS16425 PF02637 GatB domain AbD4_RS16450 PF01431 Peptidase family M13 AbD4_RS16450 PF05649 Peptidase family M13 AbD4_RS16455 PF05992 SbmA/BacA-like family AbD4_RS16460 PF13291 ACT domain AbD4_RS16460 PF00291 Pyridoxal-phosphate dependent enzyme AbD4_RS16465 PF01734 Patatin-like phospholipase AbD4_RS16470 PF01235 Sodium:alanine symporter family AbD4_RS16485 PF00881 Nitroreductase family AbD4_RS16490 PF07690 Major Facilitator Superfamily AbD4_RS16495 PF12805 FUSC-like inner membrane protein yccS AbD4_RS16505 PF00258 Flavodoxin AbD4_RS16505 PF00667 FAD binding domain AbD4_RS16505 PF00175 Oxidoreductase NAD-binding domain AbD4_RS16545 PF17969 L,D-transpeptidase C-terminal domain AbD4_RS16545 PF03734 L,D-transpeptidase catalytic domain AbD4_RS16550 PF04304 Protein of unknown function (DUF454) AbD4_RS16560 PF08085 Entericidin EcnA/B family AbD4_RS16565 PF07687 Peptidase dimerisation domain AbD4_RS16565 PF01546 Peptidase family M20/M25/M40 AbD4_RS16575 PF01584 CheW-like domain AbD4_RS16575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AbD4_RS16575 PF01627 Hpt domain AbD4_RS16575 PF00072 Response regulator receiver domain AbD4_RS16580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AbD4_RS16580 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AbD4_RS16585 PF01584 CheW-like domain AbD4_RS16590 PF00072 Response regulator receiver domain AbD4_RS16595 PF00072 Response regulator receiver domain AbD4_RS16610 PF00873 AcrB/AcrD/AcrF family AbD4_RS16615 PF03129 Anticodon binding domain AbD4_RS16615 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AbD4_RS16615 PF04073 Aminoacyl-tRNA editing domain AbD4_RS16620 PF07411 Domain of unknown function (DUF1508) AbD4_RS16625 PF03831 PhnA domain AbD4_RS16625 PF08274 PhnA Zinc-Ribbon AbD4_RS16630 PF04343 Protein of unknown function, DUF488 AbD4_RS16640 PF01571 Aminomethyltransferase folate-binding domain AbD4_RS16645 PF13098 Thioredoxin-like domain AbD4_RS16645 PF10411 Disulfide bond isomerase protein N-terminus AbD4_RS16655 PF03547 Membrane transport protein AbD4_RS16660 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AbD4_RS16665 PF07715 TonB-dependent Receptor Plug Domain AbD4_RS16665 PF00593 TonB dependent receptor AbD4_RS16670 PF02245 Methylpurine-DNA glycosylase (MPG) AbD4_RS16675 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AbD4_RS16675 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AbD4_RS16675 PF06827 Zinc finger found in FPG and IleRS AbD4_RS16690 PF01741 Large-conductance mechanosensitive channel, MscL AbD4_RS16695 PF03144 Elongation factor Tu domain 2 AbD4_RS16695 PF00679 Elongation factor G C-terminus AbD4_RS16695 PF00009 Elongation factor Tu GTP binding domain AbD4_RS16700 PF00860 Permease family AbD4_RS16705 PF08468 Methyltransferase small domain N-terminal AbD4_RS16705 PF05175 Methyltransferase small domain AbD4_RS16710 PF00324 Amino acid permease AbD4_RS16715 PF01139 tRNA-splicing ligase RtcB AbD4_RS16725 PF13505 Outer membrane protein beta-barrel domain AbD4_RS16725 PF00691 OmpA family AbD4_RS16735 PF02803 Thiolase, C-terminal domain AbD4_RS16735 PF00108 Thiolase, N-terminal domain AbD4_RS16745 PF00893 Small Multidrug Resistance protein AbD4_RS16755 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AbD4_RS16755 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AbD4_RS16760 PF01011 PQQ enzyme repeat AbD4_RS16765 PF04966 Carbohydrate-selective porin, OprB family AbD4_RS16770 PF02515 CoA-transferase family III AbD4_RS16775 PF12833 Helix-turn-helix domain AbD4_RS16775 PF02311 AraC-like ligand binding domain AbD4_RS16780 PF02803 Thiolase, C-terminal domain AbD4_RS16780 PF00108 Thiolase, N-terminal domain AbD4_RS16785 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AbD4_RS16785 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AbD4_RS16785 PF00378 Enoyl-CoA hydratase/isomerase AbD4_RS16800 PF13673 Acetyltransferase (GNAT) domain AbD4_RS16810 PF03006 Haemolysin-III related AbD4_RS16815 PF00083 Sugar (and other) transporter AbD4_RS16815 PF07690 Major Facilitator Superfamily AbD4_RS16825 PF02810 SEC-C motif AbD4_RS16825 PF07516 SecA Wing and Scaffold domain AbD4_RS16825 PF01043 SecA preprotein cross-linking domain AbD4_RS16825 PF07517 SecA DEAD-like domain AbD4_RS16830 PF10417 C-terminal domain of 1-Cys peroxiredoxin AbD4_RS16830 PF00578 AhpC/TSA family AbD4_RS16835 PF00753 Metallo-beta-lactamase superfamily AbD4_RS16850 PF02875 Mur ligase family, glutamate ligase domain AbD4_RS16850 PF08245 Mur ligase middle domain AbD4_RS16855 PF01039 Carboxyl transferase domain AbD4_RS16860 PF00290 Tryptophan synthase alpha chain AbD4_RS16885 PF00291 Pyridoxal-phosphate dependent enzyme AbD4_RS16890 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AbD4_RS16895 PF00593 TonB dependent receptor AbD4_RS16895 PF07715 TonB-dependent Receptor Plug Domain AbD4_RS16900 PF01923 Cobalamin adenosyltransferase AbD4_RS16920 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AbD4_RS16925 PF00486 Transcriptional regulatory protein, C terminal AbD4_RS16925 PF00072 Response regulator receiver domain AbD4_RS16930 PF00672 HAMP domain AbD4_RS16930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AbD4_RS16930 PF00512 His Kinase A (phospho-acceptor) domain AbD4_RS16940 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AbD4_RS16940 PF12806 Acetyl-CoA dehydrogenase C-terminal like AbD4_RS16940 PF02770 Acyl-CoA dehydrogenase, middle domain AbD4_RS16940 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AbD4_RS16945 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AbD4_RS16945 PF12806 Acetyl-CoA dehydrogenase C-terminal like AbD4_RS16945 PF02770 Acyl-CoA dehydrogenase, middle domain AbD4_RS16945 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AbD4_RS16950 PF06146 Phosphate-starvation-inducible E AbD4_RS16970 PF07715 TonB-dependent Receptor Plug Domain AbD4_RS16970 PF00593 TonB dependent receptor AbD4_RS16980 PF02938 GAD domain AbD4_RS16980 PF00152 tRNA synthetases class II (D, K and N) AbD4_RS16980 PF01336 OB-fold nucleic acid binding domain AbD4_RS16995 PF01501 Glycosyl transferase family 8 AbD4_RS16995 PF08437 Glycosyl transferase family 8 C-terminal AbD4_RS17000 PF09612 Bacterial protein of unknown function (HtrL_YibB) AbD4_RS17010 PF13439 Glycosyltransferase Family 4 AbD4_RS17010 PF00534 Glycosyl transferases group 1 AbD4_RS17020 PF13439 Glycosyltransferase Family 4 AbD4_RS17020 PF00534 Glycosyl transferases group 1 AbD4_RS17025 PF01522 Polysaccharide deacetylase AbD4_RS17035 PF01063 Amino-transferase class IV AbD4_RS17040 PF08335 GlnD PII-uridylyltransferase AbD4_RS17040 PF03710 Glutamate-ammonia ligase adenylyltransferase AbD4_RS17045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AbD4_RS17045 PF00512 His Kinase A (phospho-acceptor) domain AbD4_RS17045 PF07689 KaiB domain AbD4_RS17055 PF02547 Queuosine biosynthesis protein AbD4_RS17070 PF01702 Queuine tRNA-ribosyltransferase AbD4_RS17075 PF02699 Preprotein translocase subunit AbD4_RS17080 PF13721 SecD export protein N-terminal TM region AbD4_RS17080 PF02355 Protein export membrane protein AbD4_RS17080 PF07549 SecD/SecF GG Motif AbD4_RS17085 PF02355 Protein export membrane protein AbD4_RS17085 PF07549 SecD/SecF GG Motif AbD4_RS17090 PF02441 Flavoprotein AbD4_RS17090 PF04127 DNA / pantothenate metabolism flavoprotein AbD4_RS17095 PF04002 RadC-like JAB domain AbD4_RS17100 PF01062 Bestrophin, RFP-TM, chloride channel AbD4_RS17105 PF02811 PHP domain AbD4_RS17110 PF04279 Intracellular septation protein A AbD4_RS17115 PF03795 YCII-related domain AbD4_RS17125 PF01266 FAD dependent oxidoreductase AbD4_RS17125 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AbD4_RS17135 PF04461 Protein of unknown function (DUF520) AbD4_RS17145 PF03061 Thioesterase superfamily AbD4_RS17150 PF00085 Thioredoxin AbD4_RS17155 PF00561 alpha/beta hydrolase fold AbD4_RS17160 PF04273 Putative phosphatase (DUF442) AbD4_RS17160 PF00753 Metallo-beta-lactamase superfamily AbD4_RS17170 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AbD4_RS17170 PF07992 Pyridine nucleotide-disulphide oxidoreductase AbD4_RS17205 PF00990 Diguanylate cyclase, GGDEF domain AbD4_RS17205 PF17152 Periplasmic sensor domain AbD4_RS17210 PF01389 OmpA-like transmembrane domain AbD4_RS17210 PF00691 OmpA family AbD4_RS17215 PF00149 Calcineurin-like phosphoesterase AbD4_RS17215 PF10518 TAT (twin-arginine translocation) pathway signal sequence AbD4_RS17220 PF13091 PLD-like domain AbD4_RS17230 PF01926 50S ribosome-binding GTPase AbD4_RS17230 PF16360 GTP-binding GTPase Middle Region AbD4_RS17230 PF13167 GTP-binding GTPase N-terminal AbD4_RS17250 PF00149 Calcineurin-like phosphoesterase AbD4_RS17255 PF00398 Ribosomal RNA adenine dimethylase AbD4_RS17260 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AbD4_RS17265 PF00572 Ribosomal protein L13 AbD4_RS17270 PF00380 Ribosomal protein S9/S16 AbD4_RS17275 PF13417 Glutathione S-transferase, N-terminal domain AbD4_RS17275 PF00043 Glutathione S-transferase, C-terminal domain AbD4_RS17280 PF04386 Stringent starvation protein B AbD4_RS17290 PF02785 Biotin carboxylase C-terminal domain AbD4_RS17290 PF00289 Biotin carboxylase, N-terminal domain AbD4_RS17290 PF00364 Biotin-requiring enzyme AbD4_RS17290 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AbD4_RS17300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AbD4_RS17300 PF02770 Acyl-CoA dehydrogenase, middle domain AbD4_RS17300 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AbD4_RS17305 PF01039 Carboxyl transferase domain AbD4_RS17320 PF00440 Bacterial regulatory proteins, tetR family AbD4_RS17320 PF17932 Tetracyclin repressor-like, C-terminal domain AbD4_RS17325 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AbD4_RS17325 PF02770 Acyl-CoA dehydrogenase, middle domain AbD4_RS17325 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AbD4_RS17370 PF01066 CDP-alcohol phosphatidyltransferase AbD4_RS17375 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AbD4_RS17395 PF00056 lactate/malate dehydrogenase, NAD binding domain AbD4_RS17395 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AbD4_RS17405 PF01464 Transglycosylase SLT domain AbD4_RS17405 PF10145 Phage-related minor tail protein AbD4_RS17405 PF01551 Peptidase family M23 AbD4_RS17410 PF04055 Radical SAM superfamily AbD4_RS17410 PF00919 Uncharacterized protein family UPF0004 AbD4_RS17410 PF01938 TRAM domain AbD4_RS17415 PF02562 PhoH-like protein AbD4_RS17420 PF02130 Uncharacterized protein family UPF0054 AbD4_RS17445 PF03358 NADPH-dependent FMN reductase AbD4_RS17450 PF03631 Virulence factor BrkB AbD4_RS17455 PF00892 EamA-like transporter family AbD4_RS17460 PF12833 Helix-turn-helix domain AbD4_RS17465 PF01557 Fumarylacetoacetate (FAA) hydrolase family AbD4_RS17515 PF00773 RNB domain AbD4_RS17515 PF17876 Cold shock domain AbD4_RS17515 PF08461 Ribonuclease R winged-helix domain AbD4_RS17515 PF08206 Ribonuclease B OB domain AbD4_RS17515 PF00575 S1 RNA binding domain AbD4_RS17520 PF01432 Peptidase family M3 AbD4_RS17525 PF09526 Probable metal-binding protein (DUF2387) AbD4_RS17555 PF03937 Flavinator of succinate dehydrogenase AbD4_RS17560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AbD4_RS17560 PF02770 Acyl-CoA dehydrogenase, middle domain AbD4_RS17560 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AbD4_RS17565 PF00743 Flavin-binding monooxygenase-like AbD4_RS17570 PF01196 Ribosomal protein L17 AbD4_RS17575 PF01000 RNA polymerase Rpb3/RpoA insert domain AbD4_RS17575 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AbD4_RS17575 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AbD4_RS17580 PF00163 Ribosomal protein S4/S9 N-terminal domain AbD4_RS17580 PF01479 S4 domain AbD4_RS17585 PF00411 Ribosomal protein S11 AbD4_RS17590 PF00416 Ribosomal protein S13/S18 AbD4_RS17595 PF00444 Ribosomal protein L36 AbD4_RS17600 PF00344 SecY translocase AbD4_RS17605 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AbD4_RS17610 PF00327 Ribosomal protein L30p/L7e AbD4_RS17615 PF00333 Ribosomal protein S5, N-terminal domain AbD4_RS17615 PF03719 Ribosomal protein S5, C-terminal domain AbD4_RS17620 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AbD4_RS17625 PF00347 Ribosomal protein L6 AbD4_RS17630 PF00410 Ribosomal protein S8 AbD4_RS17635 PF00253 Ribosomal protein S14p/S29e AbD4_RS17640 PF00281 Ribosomal protein L5 AbD4_RS17640 PF00673 ribosomal L5P family C-terminus AbD4_RS17645 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AbD4_RS17645 PF00467 KOW motif AbD4_RS17650 PF00238 Ribosomal protein L14p/L23e AbD4_RS17655 PF00366 Ribosomal protein S17 AbD4_RS17660 PF00831 Ribosomal L29 protein AbD4_RS17665 PF00252 Ribosomal protein L16p/L10e AbD4_RS17675 PF00237 Ribosomal protein L22p/L17e AbD4_RS17680 PF00203 Ribosomal protein S19 AbD4_RS17685 PF00181 Ribosomal Proteins L2, RNA binding domain AbD4_RS17685 PF03947 Ribosomal Proteins L2, C-terminal domain AbD4_RS17690 PF00276 Ribosomal protein L23 AbD4_RS17695 PF00573 Ribosomal protein L4/L1 family AbD4_RS17700 PF00297 Ribosomal protein L3 AbD4_RS17705 PF00338 Ribosomal protein S10p/S20e AbD4_RS17710 PF00117 Glutamine amidotransferase class-I AbD4_RS17715 PF01053 Cys/Met metabolism PLP-dependent enzyme AbD4_RS17720 PF05872 Bacterial protein of unknown function (DUF853) AbD4_RS17730 PF00970 Oxidoreductase FAD-binding domain AbD4_RS17730 PF00042 Globin AbD4_RS17730 PF00175 Oxidoreductase NAD-binding domain AbD4_RS17735 PF02082 Transcriptional regulator AbD4_RS17740 PF01926 50S ribosome-binding GTPase AbD4_RS17750 PF00375 Sodium:dicarboxylate symporter family AbD4_RS17760 PF01553 Acyltransferase AbD4_RS17775 PF00270 DEAD/DEAH box helicase AbD4_RS17775 PF00271 Helicase conserved C-terminal domain AbD4_RS17775 PF17191 RecG wedge domain AbD4_RS17780 PF00156 Phosphoribosyl transferase domain AbD4_RS17785 PF00293 NUDIX domain AbD4_RS17790 PF03641 Possible lysine decarboxylase AbD4_RS17795 PF01544 CorA-like Mg2+ transporter protein AbD4_RS17805 PF05494 MlaC protein AbD4_RS17815 PF02405 Permease MlaE AbD4_RS17820 PF00005 ABC transporter AbD4_RS17830 PF00270 DEAD/DEAH box helicase AbD4_RS17830 PF00271 Helicase conserved C-terminal domain AbD4_RS17830 PF03880 DbpA RNA binding domain AbD4_RS17830 PF12343 Cold shock protein DEAD box A AbD4_RS17835 PF00459 Inositol monophosphatase family AbD4_RS17840 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AbD4_RS17840 PF02780 Transketolase, C-terminal domain AbD4_RS17840 PF02779 Transketolase, pyrimidine binding domain AbD4_RS17845 PF00925 GTP cyclohydrolase II AbD4_RS17850 PF01218 Coproporphyrinogen III oxidase AbD4_RS17855 PF08501 Shikimate dehydrogenase substrate binding domain AbD4_RS17855 PF01488 Shikimate / quinate 5-dehydrogenase AbD4_RS17855 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AbD4_RS17865 PF12806 Acetyl-CoA dehydrogenase C-terminal like AbD4_RS17865 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AbD4_RS17865 PF02770 Acyl-CoA dehydrogenase, middle domain AbD4_RS17865 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AbD4_RS17875 PF04024 PspC domain AbD4_RS17880 PF00571 CBS domain AbD4_RS17905 PF02091 Glycyl-tRNA synthetase alpha subunit AbD4_RS17910 PF05746 DALR anticodon binding domain AbD4_RS17910 PF02092 Glycyl-tRNA synthetase beta subunit AbD4_RS17915 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system AbD4_RS17935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS17935 PF03466 LysR substrate binding domain AbD4_RS17950 PF00082 Subtilase family AbD4_RS17950 PF05922 Peptidase inhibitor I9 AbD4_RS17965 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AbD4_RS17970 PF04996 Succinylarginine dihydrolase AbD4_RS17975 PF00171 Aldehyde dehydrogenase family AbD4_RS17980 PF04958 Arginine N-succinyltransferase beta subunit AbD4_RS17985 PF00202 Aminotransferase class-III AbD4_RS17990 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AbD4_RS17990 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AbD4_RS17995 PF00324 Amino acid permease AbD4_RS18005 PF08241 Methyltransferase domain AbD4_RS18025 PF13614 AAA domain AbD4_RS18030 PF01594 AI-2E family transporter AbD4_RS18035 PF00080 Copper/zinc superoxide dismutase (SODC) AbD4_RS18040 PF12805 FUSC-like inner membrane protein yccS AbD4_RS18045 PF07690 Major Facilitator Superfamily AbD4_RS18055 PF02525 Flavodoxin-like fold AbD4_RS18060 PF03992 Antibiotic biosynthesis monooxygenase AbD4_RS18070 PF01565 FAD binding domain AbD4_RS18070 PF02913 FAD linked oxidases, C-terminal domain AbD4_RS18075 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AbD4_RS18075 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AbD4_RS18080 PF00892 EamA-like transporter family AbD4_RS18085 PF00892 EamA-like transporter family AbD4_RS18095 PF01925 Sulfite exporter TauE/SafE AbD4_RS18100 PF09157 Pseudouridine synthase II TruB, C-terminal AbD4_RS18100 PF16198 tRNA pseudouridylate synthase B C-terminal domain AbD4_RS18100 PF01509 TruB family pseudouridylate synthase (N terminal domain) AbD4_RS18105 PF03280 Proteobacterial lipase chaperone protein AbD4_RS18110 PF00561 alpha/beta hydrolase fold AbD4_RS18115 PF01245 Ribosomal protein L19 AbD4_RS18120 PF01746 tRNA (Guanine-1)-methyltransferase AbD4_RS18125 PF01782 RimM N-terminal domain AbD4_RS18125 PF05239 PRC-barrel domain AbD4_RS18130 PF00886 Ribosomal protein S16 AbD4_RS18170 PF02401 LytB protein AbD4_RS18175 PF00625 Guanylate kinase AbD4_RS18180 PF01192 RNA polymerase Rpb6 AbD4_RS18190 PF13291 ACT domain AbD4_RS18190 PF04607 Region found in RelA / SpoT proteins AbD4_RS18190 PF02824 TGS domain AbD4_RS18195 PF01042 Endoribonuclease L-PSP AbD4_RS18200 PF04324 BFD-like [2Fe-2S] binding domain AbD4_RS18205 PF00210 Ferritin-like domain AbD4_RS18210 PF15864 Protein glycosylation ligase AbD4_RS18210 PF11846 Virulence factor membrane-bound polymerase, C-terminal AbD4_RS18210 PF04932 O-Antigen ligase AbD4_RS18215 PF07963 Prokaryotic N-terminal methylation motif AbD4_RS18215 PF00114 Pilin (bacterial filament) AbD4_RS18225 PF04536 TPM domain AbD4_RS18230 PF04011 LemA family AbD4_RS18240 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AbD4_RS18240 PF07992 Pyridine nucleotide-disulphide oxidoreductase AbD4_RS18245 PF01493 GXGXG motif AbD4_RS18245 PF00310 Glutamine amidotransferases class-II AbD4_RS18245 PF04898 Glutamate synthase central domain AbD4_RS18245 PF01645 Conserved region in glutamate synthase AbD4_RS18255 PF01761 3-dehydroquinate synthase AbD4_RS18260 PF01202 Shikimate kinase AbD4_RS18265 PF11741 AMIN domain AbD4_RS18265 PF00263 Bacterial type II and III secretion system protein AbD4_RS18265 PF03958 Bacterial type II/III secretion system short domain AbD4_RS18265 PF07660 Secretin and TonB N terminus short domain AbD4_RS18275 PF04350 Pilus assembly protein, PilO AbD4_RS18280 PF05137 Fimbrial assembly protein (PilN) AbD4_RS18285 PF11104 Type IV pilus assembly protein PilM; AbD4_RS18290 PF00905 Penicillin binding protein transpeptidase domain AbD4_RS18290 PF00912 Transglycosylase AbD4_RS18290 PF17092 Penicillin-binding protein OB-like domain AbD4_RS18295 PF13847 Methyltransferase domain AbD4_RS18305 PF00953 Glycosyl transferase family 4 AbD4_RS18310 PF08245 Mur ligase middle domain AbD4_RS18310 PF01225 Mur ligase family, catalytic domain AbD4_RS18310 PF02875 Mur ligase family, glutamate ligase domain AbD4_RS18315 PF01225 Mur ligase family, catalytic domain AbD4_RS18315 PF02875 Mur ligase family, glutamate ligase domain AbD4_RS18315 PF08245 Mur ligase middle domain AbD4_RS18320 PF03717 Penicillin-binding Protein dimerisation domain AbD4_RS18320 PF00905 Penicillin binding protein transpeptidase domain AbD4_RS18330 PF01795 MraW methylase family AbD4_RS18345 PF00749 tRNA synthetases class I (E and Q), catalytic domain AbD4_RS18360 PF00324 Amino acid permease AbD4_RS18390 PF01545 Cation efflux family AbD4_RS18395 PF00873 AcrB/AcrD/AcrF family AbD4_RS18400 PF00529 HlyD membrane-fusion protein of T1SS AbD4_RS18400 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AbD4_RS18425 PF00005 ABC transporter AbD4_RS18425 PF12848 ABC transporter AbD4_RS18430 PF01053 Cys/Met metabolism PLP-dependent enzyme AbD4_RS18435 PF00106 short chain dehydrogenase AbD4_RS18440 PF01740 STAS domain AbD4_RS18440 PF00916 Sulfate permease family AbD4_RS18445 PF09371 Tex-like protein N-terminal domain AbD4_RS18445 PF16921 Tex protein YqgF-like domain AbD4_RS18445 PF17674 HHH domain AbD4_RS18445 PF00575 S1 RNA binding domain AbD4_RS18450 PF00072 Response regulator receiver domain AbD4_RS18450 PF00486 Transcriptional regulatory protein, C terminal AbD4_RS18455 PF00672 HAMP domain AbD4_RS18455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AbD4_RS18455 PF00512 His Kinase A (phospho-acceptor) domain AbD4_RS18465 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AbD4_RS18465 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AbD4_RS18470 PF00583 Acetyltransferase (GNAT) family AbD4_RS18490 PF00475 Imidazoleglycerol-phosphate dehydratase AbD4_RS18495 PF00117 Glutamine amidotransferase class-I AbD4_RS18510 PF00977 Histidine biosynthesis protein AbD4_RS18515 PF00664 ABC transporter transmembrane region AbD4_RS18515 PF00005 ABC transporter AbD4_RS18530 PF03992 Antibiotic biosynthesis monooxygenase AbD4_RS18545 PF01636 Phosphotransferase enzyme family AbD4_RS18550 PF00977 Histidine biosynthesis protein AbD4_RS18565 PF00230 Major intrinsic protein AbD4_RS18590 PF02705 K+ potassium transporter AbD4_RS18615 PF02525 Flavodoxin-like fold AbD4_RS18620 PF01638 HxlR-like helix-turn-helix AbD4_RS18650 PF01638 HxlR-like helix-turn-helix AbD4_RS18665 PF02311 AraC-like ligand binding domain AbD4_RS18665 PF12833 Helix-turn-helix domain AbD4_RS18670 PF00248 Aldo/keto reductase family AbD4_RS18690 PF03466 LysR substrate binding domain AbD4_RS18690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS18695 PF07690 Major Facilitator Superfamily AbD4_RS18715 PF01593 Flavin containing amine oxidoreductase AbD4_RS18720 PF05726 Pirin C-terminal cupin domain AbD4_RS18720 PF02678 Pirin AbD4_RS18725 PF00857 Isochorismatase family AbD4_RS18730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS18735 PF00171 Aldehyde dehydrogenase family AbD4_RS18740 PF00202 Aminotransferase class-III AbD4_RS18745 PF00155 Aminotransferase class I and II AbD4_RS18745 PF00392 Bacterial regulatory proteins, gntR family AbD4_RS18750 PF00324 Amino acid permease AbD4_RS18760 PF03591 AzlC protein AbD4_RS18770 PF00436 Single-strand binding protein family AbD4_RS18775 PF07690 Major Facilitator Superfamily AbD4_RS18785 PF02581 Thiamine monophosphate synthase AbD4_RS18785 PF03070 TENA/THI-4/PQQC family AbD4_RS18785 PF08543 Phosphomethylpyrimidine kinase AbD4_RS18790 PF06942 GlpM protein AbD4_RS18800 PF08240 Alcohol dehydrogenase GroES-like domain AbD4_RS18800 PF00107 Zinc-binding dehydrogenase AbD4_RS18805 PF16925 Tetracyclin repressor-like, C-terminal domain AbD4_RS18805 PF00440 Bacterial regulatory proteins, tetR family AbD4_RS18810 PF17755 UvrA DNA-binding domain AbD4_RS18810 PF17760 UvrA interaction domain AbD4_RS18815 PF00990 Diguanylate cyclase, GGDEF domain AbD4_RS18825 PF02028 BCCT, betaine/carnitine/choline family transporter AbD4_RS18835 PF00474 Sodium:solute symporter family AbD4_RS18840 PF04341 Protein of unknown function, DUF485 AbD4_RS18845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AbD4_RS18845 PF00072 Response regulator receiver domain AbD4_RS18845 PF01627 Hpt domain AbD4_RS18845 PF00512 His Kinase A (phospho-acceptor) domain AbD4_RS18845 PF00672 HAMP domain AbD4_RS18855 PF00072 Response regulator receiver domain AbD4_RS18855 PF00196 Bacterial regulatory proteins, luxR family AbD4_RS18860 PF03358 NADPH-dependent FMN reductase AbD4_RS18865 PF00296 Luciferase-like monooxygenase AbD4_RS18870 PF01037 Lrp/AsnC ligand binding domain AbD4_RS18875 PF00857 Isochorismatase family AbD4_RS18880 PF00501 AMP-binding enzyme AbD4_RS18880 PF16177 Acetyl-coenzyme A synthetase N-terminus AbD4_RS18880 PF13193 AMP-binding enzyme C-terminal domain AbD4_RS18890 PF00924 Mechanosensitive ion channel AbD4_RS18895 PF04452 RNA methyltransferase AbD4_RS18900 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AbD4_RS18905 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AbD4_RS18930 PF01368 DHH family AbD4_RS18930 PF02272 DHHA1 domain AbD4_RS18930 PF17768 RecJ OB domain AbD4_RS18935 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AbD4_RS18935 PF01243 Pyridoxamine 5'-phosphate oxidase AbD4_RS18940 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AbD4_RS18940 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AbD4_RS18940 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AbD4_RS18940 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AbD4_RS18945 PF00478 IMP dehydrogenase / GMP reductase domain AbD4_RS18945 PF00571 CBS domain AbD4_RS18950 PF03692 Putative zinc- or iron-chelating domain AbD4_RS18955 PF01613 Flavin reductase like domain AbD4_RS18955 PF00258 Flavodoxin AbD4_RS18960 PF07715 TonB-dependent Receptor Plug Domain AbD4_RS18960 PF00593 TonB dependent receptor AbD4_RS18965 PF01169 Uncharacterized protein family UPF0016 AbD4_RS18975 PF02817 e3 binding domain AbD4_RS18975 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AbD4_RS18975 PF00364 Biotin-requiring enzyme AbD4_RS18980 PF00456 Transketolase, thiamine diphosphate binding domain AbD4_RS18980 PF17831 Pyruvate dehydrogenase E1 component middle domain AbD4_RS18985 PF01551 Peptidase family M23 AbD4_RS18995 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AbD4_RS19000 PF12327 FtsZ family, C-terminal domain AbD4_RS19000 PF00091 Tubulin/FtsZ family, GTPase domain AbD4_RS19005 PF02491 SHS2 domain inserted in FTSA AbD4_RS19010 PF03799 Cell division protein FtsQ AbD4_RS19010 PF08478 POTRA domain, FtsQ-type AbD4_RS19015 PF01820 D-ala D-ala ligase N-terminus AbD4_RS19015 PF07478 D-ala D-ala ligase C-terminus AbD4_RS19020 PF01225 Mur ligase family, catalytic domain AbD4_RS19020 PF02875 Mur ligase family, glutamate ligase domain AbD4_RS19020 PF08245 Mur ligase middle domain AbD4_RS19025 PF04101 Glycosyltransferase family 28 C-terminal domain AbD4_RS19025 PF03033 Glycosyltransferase family 28 N-terminal domain AbD4_RS19030 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AbD4_RS19030 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AbD4_RS19040 PF00593 TonB dependent receptor AbD4_RS19040 PF07715 TonB-dependent Receptor Plug Domain AbD4_RS19050 PF00156 Phosphoribosyl transferase domain AbD4_RS19055 PF03372 Endonuclease/Exonuclease/phosphatase family AbD4_RS19060 PF03960 ArsC family AbD4_RS19070 PF07859 alpha/beta hydrolase fold AbD4_RS19075 PF00990 Diguanylate cyclase, GGDEF domain AbD4_RS19075 PF07694 5TMR of 5TMR-LYT AbD4_RS19080 PF11412 Disulphide bond corrector protein DsbC AbD4_RS19080 PF02683 Cytochrome C biogenesis protein transmembrane region AbD4_RS19110 PF00576 HIUase/Transthyretin family AbD4_RS19115 PF00860 Permease family AbD4_RS19125 PF01494 FAD binding domain AbD4_RS19130 PF03561 Allantoicase repeat AbD4_RS19135 PF04115 Ureidoglycolate lyase AbD4_RS19140 PF00106 short chain dehydrogenase AbD4_RS19145 PF00204 DNA gyrase B AbD4_RS19145 PF00986 DNA gyrase B subunit, carboxyl terminus AbD4_RS19145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AbD4_RS19145 PF01751 Toprim domain AbD4_RS19150 PF05728 Uncharacterised protein family (UPF0227) AbD4_RS19195 PF01471 Putative peptidoglycan binding domain AbD4_RS19195 PF01510 N-acetylmuramoyl-L-alanine amidase AbD4_RS19195 PF01476 LysM domain AbD4_RS19200 PF04717 Type VI secretion system, phage-baseplate injector AbD4_RS19200 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) AbD4_RS19200 PF13296 Putative type VI secretion system Rhs element Vgr AbD4_RS19205 PF02600 Disulfide bond formation protein DsbB AbD4_RS19210 PF04262 Glutamate-cysteine ligase AbD4_RS19225 PF04286 Protein of unknown function (DUF445) AbD4_RS19230 PF00155 Aminotransferase class I and II AbD4_RS19235 PF01554 MatE AbD4_RS19240 PF00106 short chain dehydrogenase AbD4_RS19250 PF00072 Response regulator receiver domain AbD4_RS19250 PF00486 Transcriptional regulatory protein, C terminal AbD4_RS19255 PF11808 Phosphate regulon sensor protein PhoR AbD4_RS19255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AbD4_RS19255 PF00512 His Kinase A (phospho-acceptor) domain AbD4_RS19255 PF00989 PAS fold AbD4_RS19265 PF02666 Phosphatidylserine decarboxylase AbD4_RS19270 PF00581 Rhodanese-like domain AbD4_RS19275 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AbD4_RS19275 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AbD4_RS19280 PF02580 D-Tyr-tRNA(Tyr) deacylase AbD4_RS19305 PF00925 GTP cyclohydrolase II AbD4_RS19305 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AbD4_RS19310 PF00885 6,7-dimethyl-8-ribityllumazine synthase AbD4_RS19315 PF01029 NusB family AbD4_RS19320 PF02769 AIR synthase related protein, C-terminal domain AbD4_RS19320 PF00586 AIR synthase related protein, N-terminal domain AbD4_RS19325 PF04608 Phosphatidylglycerophosphatase A AbD4_RS19330 PF14602 Hexapeptide repeat of succinyl-transferase AbD4_RS19330 PF00132 Bacterial transferase hexapeptide (six repeats) AbD4_RS19330 PF12804 MobA-like NTP transferase domain AbD4_RS19335 PF01380 SIS domain AbD4_RS19340 PF08721 TnsA endonuclease C terminal AbD4_RS19340 PF08722 TnsA endonuclease N terminal AbD4_RS19345 PF00665 Integrase core domain AbD4_RS19350 PF13401 AAA domain AbD4_RS19350 PF11426 Tn7 transposition regulator TnsC AbD4_RS19355 PF06527 TniQ AbD4_RS19355 PF15978 Tn7-like transposition protein D AbD4_RS19385 PF13005 zinc-finger binding domain of transposase IS66 AbD4_RS19385 PF13007 Transposase C of IS166 homeodomain AbD4_RS19385 PF13817 IS66 C-terminal element AbD4_RS19385 PF03050 Transposase IS66 family AbD4_RS19415 PF00664 ABC transporter transmembrane region AbD4_RS19415 PF00005 ABC transporter AbD4_RS19415 PF03412 Peptidase C39 family AbD4_RS19425 PF01554 MatE AbD4_RS19440 PF07715 TonB-dependent Receptor Plug Domain AbD4_RS19440 PF00593 TonB dependent receptor AbD4_RS19460 PF11426 Tn7 transposition regulator TnsC AbD4_RS19460 PF13401 AAA domain AbD4_RS19470 PF01654 Cytochrome bd terminal oxidase subunit I AbD4_RS19475 PF02322 Cytochrome bd terminal oxidase subunit II AbD4_RS19505 PF00581 Rhodanese-like domain AbD4_RS19510 PF01925 Sulfite exporter TauE/SafE AbD4_RS19515 PF00753 Metallo-beta-lactamase superfamily AbD4_RS19525 PF04143 Sulphur transport AbD4_RS19535 PF07683 Cobalamin synthesis protein cobW C-terminal domain AbD4_RS19535 PF02492 CobW/HypB/UreG, nucleotide-binding domain AbD4_RS19550 PF09190 DALR domain AbD4_RS19550 PF01406 tRNA synthetases class I (C) catalytic domain AbD4_RS19555 PF01475 Ferric uptake regulator family AbD4_RS19560 PF02649 Type I GTP cyclohydrolase folE2 AbD4_RS19565 PF01502 Phosphoribosyl-AMP cyclohydrolase AbD4_RS19570 PF00132 Bacterial transferase hexapeptide (six repeats) AbD4_RS19570 PF00101 Ribulose bisphosphate carboxylase, small chain AbD4_RS19575 PF01979 Amidohydrolase family AbD4_RS19580 PF03129 Anticodon binding domain AbD4_RS19580 PF02824 TGS domain AbD4_RS19580 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AbD4_RS19580 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AbD4_RS19595 PF01177 Asp/Glu/Hydantoin racemase AbD4_RS19600 PF13419 Haloacid dehalogenase-like hydrolase AbD4_RS19610 PF00491 Arginase family AbD4_RS19615 PF01979 Amidohydrolase family AbD4_RS19620 PF00324 Amino acid permease AbD4_RS19625 PF00221 Aromatic amino acid lyase AbD4_RS19630 PF01175 Urocanase Rossmann-like domain AbD4_RS19630 PF17392 Urocanase C-terminal domain AbD4_RS19630 PF17391 Urocanase N-terminal domain AbD4_RS19635 PF05962 HutD AbD4_RS19640 PF07702 UTRA domain AbD4_RS19640 PF00392 Bacterial regulatory proteins, gntR family AbD4_RS19650 PF07683 Cobalamin synthesis protein cobW C-terminal domain AbD4_RS19650 PF02492 CobW/HypB/UreG, nucleotide-binding domain AbD4_RS19660 PF00324 Amino acid permease AbD4_RS19670 PF02798 Glutathione S-transferase, N-terminal domain AbD4_RS19670 PF14497 Glutathione S-transferase, C-terminal domain AbD4_RS19675 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AbD4_RS19685 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AbD4_RS19690 PF04463 Protein of unknown function (DUF523) AbD4_RS19695 PF01554 MatE AbD4_RS19700 PF01758 Sodium Bile acid symporter family AbD4_RS19705 PF00857 Isochorismatase family AbD4_RS19710 PF00701 Dihydrodipicolinate synthetase family AbD4_RS19720 PF01259 SAICAR synthetase AbD4_RS19730 PF01226 Formate/nitrite transporter AbD4_RS19735 PF00004 ATPase family associated with various cellular activities (AAA) AbD4_RS19735 PF16193 AAA C-terminal domain AbD4_RS19735 PF12002 MgsA AAA+ ATPase C terminal AbD4_RS19740 PF07995 Glucose / Sorbosone dehydrogenase AbD4_RS19745 PF03692 Putative zinc- or iron-chelating domain AbD4_RS19750 PF07043 Protein of unknown function (DUF1328) AbD4_RS19765 PF10576 Iron-sulfur binding domain of endonuclease III AbD4_RS19765 PF00633 Helix-hairpin-helix motif AbD4_RS19765 PF00730 HhH-GPD superfamily base excision DNA repair protein AbD4_RS19765 PF14815 NUDIX domain AbD4_RS19775 PF13610 DDE domain AbD4_RS19790 PF03352 Methyladenine glycosylase AbD4_RS19795 PF08240 Alcohol dehydrogenase GroES-like domain AbD4_RS19795 PF00107 Zinc-binding dehydrogenase AbD4_RS19800 PF00155 Aminotransferase class I and II AbD4_RS19800 PF00392 Bacterial regulatory proteins, gntR family AbD4_RS19815 PF03466 LysR substrate binding domain AbD4_RS19815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS19820 PF00248 Aldo/keto reductase family AbD4_RS19825 PF07690 Major Facilitator Superfamily AbD4_RS19835 PF01113 Dihydrodipicolinate reductase, N-terminus AbD4_RS19835 PF05173 Dihydrodipicolinate reductase, C-terminus AbD4_RS19845 PF00684 DnaJ central domain AbD4_RS19845 PF01556 DnaJ C terminal domain AbD4_RS19845 PF00226 DnaJ domain AbD4_RS19855 PF00873 AcrB/AcrD/AcrF family AbD4_RS19860 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AbD4_RS19865 PF08361 MAATS-type transcriptional repressor, C-terminal region AbD4_RS19865 PF00440 Bacterial regulatory proteins, tetR family AbD4_RS19870 PF00311 Phosphoenolpyruvate carboxylase AbD4_RS19875 PF00860 Permease family AbD4_RS19880 PF03466 LysR substrate binding domain AbD4_RS19880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AbD4_RS19895 PF00920 Dehydratase family AbD4_RS19900 PF02911 Formyl transferase, C-terminal domain AbD4_RS19900 PF00551 Formyl transferase AbD4_RS19905 PF01029 NusB family AbD4_RS19905 PF01189 16S rRNA methyltransferase RsmB/F AbD4_RS19915 PF00209 Sodium:neurotransmitter symporter family AbD4_RS19960 PF13614 AAA domain AbD4_RS19965 PF17762 HTH domain found in ParB protein AbD4_RS19965 PF02195 ParB-like nuclease domain AbD4_RS19970 PF13438 Domain of unknown function (DUF4113) AbD4_RS19970 PF11799 impB/mucB/samB family C-terminal domain AbD4_RS19970 PF11798 IMS family HHH motif AbD4_RS19970 PF00817 impB/mucB/samB family AbD4_RS19975 PF00717 Peptidase S24-like AbD4_RS20010 PF04225 Opacity-associated protein A LysM-like domain AbD4_RS20010 PF01551 Peptidase family M23 AbD4_RS20075 PF13005 zinc-finger binding domain of transposase IS66 AbD4_RS20075 PF03050 Transposase IS66 family AbD4_RS20075 PF13817 IS66 C-terminal element AbD4_RS20075 PF13007 Transposase C of IS166 homeodomain AbD4_RS20200 PF03050 Transposase IS66 family AbD4_RS20200 PF13817 IS66 C-terminal element AbD4_RS20200 PF13007 Transposase C of IS166 homeodomain AbD4_RS20200 PF13005 zinc-finger binding domain of transposase IS66 AbD4_RS20255 PF13817 IS66 C-terminal element AbD4_RS20255 PF03050 Transposase IS66 family AbD4_RS20255 PF13007 Transposase C of IS166 homeodomain AbD4_RS20255 PF13005 zinc-finger binding domain of transposase IS66 AbD4_RS20290 PF01435 Peptidase family M48 AbD4_RS20325 PF00589 Phage integrase family AbD4_RS20325 PF02899 Phage integrase, N-terminal SAM-like domain AbD4_RS20350 PF00665 Integrase core domain AbD4_RS20365 PF00809 Pterin binding enzyme AbD4_RS20385 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase AbD4_RS20390 PF01636 Phosphotransferase enzyme family AbD4_RS20405 PF01396 Topoisomerase DNA binding C4 zinc finger AbD4_RS20405 PF01131 DNA topoisomerase AbD4_RS20405 PF01751 Toprim domain AbD4_RS20430 PF03050 Transposase IS66 family AbD4_RS20430 PF13817 IS66 C-terminal element AbD4_RS20430 PF13007 Transposase C of IS166 homeodomain AbD4_RS20430 PF13005 zinc-finger binding domain of transposase IS66 AbD4_RS20485 PF13610 DDE domain AbD4_RS20490 PF08240 Alcohol dehydrogenase GroES-like domain AbD4_RS20490 PF00107 Zinc-binding dehydrogenase AbD4_RS20495 PF02583 Metal-sensitive transcriptional repressor AbD4_RS20610 PF00437 Type II/IV secretion system protein AbD4_RS20610 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AbD4_RS20825 PF01478 Type IV leader peptidase family AbD4_RS20825 PF06750 Bacterial Peptidase A24 N-terminal domain