locus-tag class description JCR16_RS00010 PF00468 Ribosomal protein L34 JCR16_RS00015 PF08299 Bacterial dnaA protein helix-turn-helix JCR16_RS00015 PF11638 DnaA N-terminal domain JCR16_RS00015 PF00308 Bacterial dnaA protein JCR16_RS00020 PF00712 DNA polymerase III beta subunit, N-terminal domain JCR16_RS00020 PF02767 DNA polymerase III beta subunit, central domain JCR16_RS00020 PF02768 DNA polymerase III beta subunit, C-terminal domain JCR16_RS00025 PF02463 RecF/RecN/SMC N terminal domain JCR16_RS00030 PF00204 DNA gyrase B JCR16_RS00030 PF00986 DNA gyrase B subunit, carboxyl terminus JCR16_RS00030 PF18053 DNA gyrase B subunit insert domain JCR16_RS00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR16_RS00030 PF01751 Toprim domain JCR16_RS00040 PF09335 SNARE associated Golgi protein JCR16_RS00045 PF00005 ABC transporter JCR16_RS00045 PF12848 ABC transporter JCR16_RS00065 PF01521 Iron-sulphur cluster biosynthesis JCR16_RS00070 PF00561 alpha/beta hydrolase fold JCR16_RS00075 PF03702 Anhydro-N-acetylmuramic acid kinase JCR16_RS00080 PF00579 tRNA synthetases class I (W and Y) JCR16_RS00140 PF01189 16S rRNA methyltransferase RsmB/F JCR16_RS00140 PF01029 NusB family JCR16_RS00145 PF02911 Formyl transferase, C-terminal domain JCR16_RS00145 PF00551 Formyl transferase JCR16_RS00150 PF00920 Dehydratase family JCR16_RS00165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR16_RS00165 PF03466 LysR substrate binding domain JCR16_RS00170 PF00860 Permease family JCR16_RS00175 PF00311 Phosphoenolpyruvate carboxylase JCR16_RS00180 PF00440 Bacterial regulatory proteins, tetR family JCR16_RS00180 PF08361 MAATS-type transcriptional repressor, C-terminal region JCR16_RS00185 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JCR16_RS00190 PF00873 AcrB/AcrD/AcrF family JCR16_RS00200 PF00684 DnaJ central domain JCR16_RS00200 PF01556 DnaJ C terminal domain JCR16_RS00200 PF00226 DnaJ domain JCR16_RS00210 PF01113 Dihydrodipicolinate reductase, N-terminus JCR16_RS00210 PF05173 Dihydrodipicolinate reductase, C-terminus JCR16_RS00220 PF07690 Major Facilitator Superfamily JCR16_RS00225 PF00248 Aldo/keto reductase family JCR16_RS00230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR16_RS00230 PF03466 LysR substrate binding domain JCR16_RS00245 PF00392 Bacterial regulatory proteins, gntR family JCR16_RS00245 PF00155 Aminotransferase class I and II JCR16_RS00250 PF00107 Zinc-binding dehydrogenase JCR16_RS00250 PF08240 Alcohol dehydrogenase GroES-like domain JCR16_RS00255 PF03352 Methyladenine glycosylase JCR16_RS00270 PF14815 NUDIX domain JCR16_RS00270 PF00730 HhH-GPD superfamily base excision DNA repair protein JCR16_RS00270 PF00633 Helix-hairpin-helix motif JCR16_RS00270 PF10576 Iron-sulfur binding domain of endonuclease III JCR16_RS00285 PF07043 Protein of unknown function (DUF1328) JCR16_RS00290 PF03692 Putative zinc- or iron-chelating domain JCR16_RS00295 PF07995 Glucose / Sorbosone dehydrogenase JCR16_RS00300 PF16193 AAA C-terminal domain JCR16_RS00300 PF00004 ATPase family associated with various cellular activities (AAA) JCR16_RS00300 PF12002 MgsA AAA+ ATPase C terminal JCR16_RS00305 PF01226 Formate/nitrite transporter JCR16_RS00315 PF01259 SAICAR synthetase JCR16_RS00325 PF00701 Dihydrodipicolinate synthetase family JCR16_RS00330 PF00857 Isochorismatase family JCR16_RS00335 PF01758 Sodium Bile acid symporter family JCR16_RS00340 PF01554 MatE JCR16_RS00345 PF04463 Protein of unknown function (DUF523) JCR16_RS00350 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JCR16_RS00360 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JCR16_RS00365 PF02798 Glutathione S-transferase, N-terminal domain JCR16_RS00365 PF14497 Glutathione S-transferase, C-terminal domain JCR16_RS00375 PF00324 Amino acid permease JCR16_RS00385 PF02492 CobW/HypB/UreG, nucleotide-binding domain JCR16_RS00385 PF07683 Cobalamin synthesis protein cobW C-terminal domain JCR16_RS00395 PF00392 Bacterial regulatory proteins, gntR family JCR16_RS00395 PF07702 UTRA domain JCR16_RS00400 PF05962 HutD JCR16_RS00405 PF17391 Urocanase N-terminal domain JCR16_RS00405 PF01175 Urocanase Rossmann-like domain JCR16_RS00405 PF17392 Urocanase C-terminal domain JCR16_RS00410 PF00221 Aromatic amino acid lyase JCR16_RS00415 PF00324 Amino acid permease JCR16_RS00420 PF01979 Amidohydrolase family JCR16_RS00425 PF00491 Arginase family JCR16_RS00440 PF01177 Asp/Glu/Hydantoin racemase JCR16_RS00445 PF01380 SIS domain JCR16_RS00450 PF00132 Bacterial transferase hexapeptide (six repeats) JCR16_RS00450 PF14602 Hexapeptide repeat of succinyl-transferase JCR16_RS00450 PF12804 MobA-like NTP transferase domain JCR16_RS00455 PF04608 Phosphatidylglycerophosphatase A JCR16_RS00460 PF02769 AIR synthase related protein, C-terminal domain JCR16_RS00460 PF00586 AIR synthase related protein, N-terminal domain JCR16_RS00465 PF01029 NusB family JCR16_RS00470 PF00885 6,7-dimethyl-8-ribityllumazine synthase JCR16_RS00475 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JCR16_RS00475 PF00925 GTP cyclohydrolase II JCR16_RS00500 PF02580 D-Tyr-tRNA(Tyr) deacylase JCR16_RS00505 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain JCR16_RS00505 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family JCR16_RS00510 PF00581 Rhodanese-like domain JCR16_RS00515 PF02666 Phosphatidylserine decarboxylase JCR16_RS00520 PF03069 Acetamidase/Formamidase family JCR16_RS00540 PF00989 PAS fold JCR16_RS00540 PF00512 His Kinase A (phospho-acceptor) domain JCR16_RS00540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR16_RS00540 PF11808 Phosphate regulon sensor protein PhoR JCR16_RS00545 PF00486 Transcriptional regulatory protein, C terminal JCR16_RS00545 PF00072 Response regulator receiver domain JCR16_RS00555 PF00106 short chain dehydrogenase JCR16_RS00560 PF01554 MatE JCR16_RS00565 PF00155 Aminotransferase class I and II JCR16_RS00570 PF04286 Protein of unknown function (DUF445) JCR16_RS00585 PF04262 Glutamate-cysteine ligase JCR16_RS00590 PF02600 Disulfide bond formation protein DsbB JCR16_RS00595 PF13296 Putative type VI secretion system Rhs element Vgr JCR16_RS00595 PF04717 Type VI secretion system, phage-baseplate injector JCR16_RS00595 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) JCR16_RS00600 PF00877 NlpC/P60 family JCR16_RS00600 PF01476 LysM domain JCR16_RS00615 PF05728 Uncharacterised protein family (UPF0227) JCR16_RS00620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR16_RS00620 PF00986 DNA gyrase B subunit, carboxyl terminus JCR16_RS00620 PF01751 Toprim domain JCR16_RS00620 PF00204 DNA gyrase B JCR16_RS00625 PF00106 short chain dehydrogenase JCR16_RS00630 PF04115 Ureidoglycolate lyase JCR16_RS00635 PF03561 Allantoicase repeat JCR16_RS00640 PF01494 FAD binding domain JCR16_RS00650 PF00860 Permease family JCR16_RS00655 PF00576 HIUase/Transthyretin family JCR16_RS00685 PF02683 Cytochrome C biogenesis protein transmembrane region JCR16_RS00685 PF11412 Disulphide bond corrector protein DsbC JCR16_RS00690 PF00990 Diguanylate cyclase, GGDEF domain JCR16_RS00690 PF07694 5TMR of 5TMR-LYT JCR16_RS00695 PF07859 alpha/beta hydrolase fold JCR16_RS00705 PF03960 ArsC family JCR16_RS00710 PF03372 Endonuclease/Exonuclease/phosphatase family JCR16_RS00715 PF00156 Phosphoribosyl transferase domain JCR16_RS00720 PF00593 TonB dependent receptor JCR16_RS00720 PF07715 TonB-dependent Receptor Plug Domain JCR16_RS00730 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain JCR16_RS00730 PF02951 Prokaryotic glutathione synthetase, N-terminal domain JCR16_RS00735 PF03033 Glycosyltransferase family 28 N-terminal domain JCR16_RS00735 PF04101 Glycosyltransferase family 28 C-terminal domain JCR16_RS00740 PF08245 Mur ligase middle domain JCR16_RS00740 PF02875 Mur ligase family, glutamate ligase domain JCR16_RS00740 PF01225 Mur ligase family, catalytic domain JCR16_RS00745 PF07478 D-ala D-ala ligase C-terminus JCR16_RS00745 PF01820 D-ala D-ala ligase N-terminus JCR16_RS00750 PF03799 Cell division protein FtsQ JCR16_RS00750 PF08478 POTRA domain, FtsQ-type JCR16_RS00755 PF02491 SHS2 domain inserted in FTSA JCR16_RS00760 PF12327 FtsZ family, C-terminal domain JCR16_RS00760 PF00091 Tubulin/FtsZ family, GTPase domain JCR16_RS00765 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase JCR16_RS00775 PF01551 Peptidase family M23 JCR16_RS00780 PF00456 Transketolase, thiamine diphosphate binding domain JCR16_RS00780 PF17831 Pyruvate dehydrogenase E1 component middle domain JCR16_RS00785 PF02817 e3 binding domain JCR16_RS00785 PF00364 Biotin-requiring enzyme JCR16_RS00785 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JCR16_RS00795 PF01169 Uncharacterized protein family UPF0016 JCR16_RS00800 PF00593 TonB dependent receptor JCR16_RS00800 PF07715 TonB-dependent Receptor Plug Domain JCR16_RS00805 PF01613 Flavin reductase like domain JCR16_RS00805 PF00258 Flavodoxin JCR16_RS00810 PF03692 Putative zinc- or iron-chelating domain JCR16_RS00815 PF00478 IMP dehydrogenase / GMP reductase domain JCR16_RS00815 PF00571 CBS domain JCR16_RS00820 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JCR16_RS00820 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JCR16_RS00820 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JCR16_RS00820 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JCR16_RS00825 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region JCR16_RS00825 PF01243 Pyridoxamine 5'-phosphate oxidase JCR16_RS00830 PF01368 DHH family JCR16_RS00830 PF17768 RecJ OB domain JCR16_RS00830 PF02272 DHHA1 domain JCR16_RS00850 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JCR16_RS00855 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) JCR16_RS00860 PF04452 RNA methyltransferase JCR16_RS00865 PF00924 Mechanosensitive ion channel JCR16_RS00875 PF13193 AMP-binding enzyme C-terminal domain JCR16_RS00875 PF00501 AMP-binding enzyme JCR16_RS00875 PF16177 Acetyl-coenzyme A synthetase N-terminus JCR16_RS00880 PF00857 Isochorismatase family JCR16_RS00885 PF01037 Lrp/AsnC ligand binding domain JCR16_RS00890 PF00872 Transposase, Mutator family JCR16_RS00895 PF00296 Luciferase-like monooxygenase JCR16_RS00900 PF03358 NADPH-dependent FMN reductase JCR16_RS00905 PF00072 Response regulator receiver domain JCR16_RS00905 PF00196 Bacterial regulatory proteins, luxR family JCR16_RS00915 PF00512 His Kinase A (phospho-acceptor) domain JCR16_RS00915 PF01627 Hpt domain JCR16_RS00915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR16_RS00915 PF00072 Response regulator receiver domain JCR16_RS00915 PF00672 HAMP domain JCR16_RS00920 PF04341 Protein of unknown function, DUF485 JCR16_RS00925 PF00474 Sodium:solute symporter family JCR16_RS00935 PF02028 BCCT, betaine/carnitine/choline family transporter JCR16_RS00945 PF00990 Diguanylate cyclase, GGDEF domain JCR16_RS00955 PF00005 ABC transporter JCR16_RS00955 PF17760 UvrA interaction domain JCR16_RS00955 PF17755 UvrA DNA-binding domain JCR16_RS00960 PF16925 Tetracyclin repressor-like, C-terminal domain JCR16_RS00960 PF00440 Bacterial regulatory proteins, tetR family JCR16_RS00965 PF00107 Zinc-binding dehydrogenase JCR16_RS00965 PF08240 Alcohol dehydrogenase GroES-like domain JCR16_RS00975 PF06942 GlpM protein JCR16_RS00980 PF08543 Phosphomethylpyrimidine kinase JCR16_RS00980 PF03070 TENA/THI-4/PQQC family JCR16_RS00980 PF02581 Thiamine monophosphate synthase JCR16_RS00990 PF07690 Major Facilitator Superfamily JCR16_RS00995 PF00436 Single-strand binding protein family JCR16_RS01005 PF03591 AzlC protein JCR16_RS01015 PF00324 Amino acid permease JCR16_RS01020 PF00155 Aminotransferase class I and II JCR16_RS01020 PF00392 Bacterial regulatory proteins, gntR family JCR16_RS01025 PF00202 Aminotransferase class-III JCR16_RS01030 PF00171 Aldehyde dehydrogenase family JCR16_RS01035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR16_RS01040 PF00857 Isochorismatase family JCR16_RS01045 PF02678 Pirin JCR16_RS01045 PF05726 Pirin C-terminal cupin domain JCR16_RS01050 PF01593 Flavin containing amine oxidoreductase JCR16_RS01070 PF07690 Major Facilitator Superfamily JCR16_RS01075 PF03466 LysR substrate binding domain JCR16_RS01075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR16_RS01095 PF00248 Aldo/keto reductase family JCR16_RS01100 PF02311 AraC-like ligand binding domain JCR16_RS01100 PF12833 Helix-turn-helix domain JCR16_RS01130 PF01638 HxlR-like helix-turn-helix JCR16_RS01135 PF02525 Flavodoxin-like fold JCR16_RS01155 PF02705 K+ potassium transporter JCR16_RS01180 PF00230 Major intrinsic protein JCR16_RS01195 PF00977 Histidine biosynthesis protein JCR16_RS01200 PF01636 Phosphotransferase enzyme family JCR16_RS01215 PF03992 Antibiotic biosynthesis monooxygenase JCR16_RS01230 PF00977 Histidine biosynthesis protein JCR16_RS01245 PF00117 Glutamine amidotransferase class-I JCR16_RS01250 PF00475 Imidazoleglycerol-phosphate dehydratase JCR16_RS01270 PF00583 Acetyltransferase (GNAT) family JCR16_RS01275 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain JCR16_RS01275 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain JCR16_RS01285 PF00672 HAMP domain JCR16_RS01285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR16_RS01285 PF00512 His Kinase A (phospho-acceptor) domain JCR16_RS01290 PF00072 Response regulator receiver domain JCR16_RS01290 PF00486 Transcriptional regulatory protein, C terminal JCR16_RS01295 PF16921 Tex protein YqgF-like domain JCR16_RS01295 PF09371 Tex-like protein N-terminal domain JCR16_RS01295 PF17674 HHH domain JCR16_RS01295 PF00575 S1 RNA binding domain JCR16_RS01300 PF00916 Sulfate permease family JCR16_RS01300 PF01740 STAS domain JCR16_RS01305 PF00106 short chain dehydrogenase JCR16_RS01310 PF01053 Cys/Met metabolism PLP-dependent enzyme JCR16_RS01315 PF00005 ABC transporter JCR16_RS01315 PF12848 ABC transporter JCR16_RS01340 PF04191 Phospholipid methyltransferase JCR16_RS01360 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JCR16_RS01360 PF00529 HlyD membrane-fusion protein of T1SS JCR16_RS01365 PF00873 AcrB/AcrD/AcrF family JCR16_RS01370 PF01545 Cation efflux family JCR16_RS01400 PF00324 Amino acid permease JCR16_RS01415 PF00749 tRNA synthetases class I (E and Q), catalytic domain JCR16_RS01430 PF01795 MraW methylase family JCR16_RS01440 PF03717 Penicillin-binding Protein dimerisation domain JCR16_RS01440 PF00905 Penicillin binding protein transpeptidase domain JCR16_RS01445 PF01225 Mur ligase family, catalytic domain JCR16_RS01445 PF08245 Mur ligase middle domain JCR16_RS01445 PF02875 Mur ligase family, glutamate ligase domain JCR16_RS01450 PF02875 Mur ligase family, glutamate ligase domain JCR16_RS01450 PF08245 Mur ligase middle domain JCR16_RS01450 PF01225 Mur ligase family, catalytic domain JCR16_RS01455 PF00953 Glycosyl transferase family 4 JCR16_RS01465 PF13847 Methyltransferase domain JCR16_RS01470 PF00905 Penicillin binding protein transpeptidase domain JCR16_RS01470 PF17092 Penicillin-binding protein OB-like domain JCR16_RS01470 PF00912 Transglycosylase JCR16_RS01475 PF11104 Type IV pilus assembly protein PilM; JCR16_RS01480 PF05137 Fimbrial assembly protein (PilN) JCR16_RS01485 PF04350 Pilus assembly protein, PilO JCR16_RS01495 PF00263 Bacterial type II and III secretion system protein JCR16_RS01495 PF11741 AMIN domain JCR16_RS01495 PF07660 Secretin and TonB N terminus short domain JCR16_RS01495 PF03958 Bacterial type II/III secretion system short domain JCR16_RS01500 PF01202 Shikimate kinase JCR16_RS01505 PF01761 3-dehydroquinate synthase JCR16_RS01515 PF00310 Glutamine amidotransferases class-II JCR16_RS01515 PF01493 GXGXG motif JCR16_RS01515 PF04898 Glutamate synthase central domain JCR16_RS01515 PF01645 Conserved region in glutamate synthase JCR16_RS01520 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JCR16_RS01520 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR16_RS01530 PF04011 LemA family JCR16_RS01535 PF04536 TPM domain JCR16_RS01545 PF00114 Pilin (bacterial filament) JCR16_RS01545 PF07963 Prokaryotic N-terminal methylation motif JCR16_RS01555 PF11846 Virulence factor membrane-bound polymerase, C-terminal JCR16_RS01555 PF04932 O-Antigen ligase JCR16_RS01555 PF15864 Protein glycosylation ligase JCR16_RS01560 PF00210 Ferritin-like domain JCR16_RS01565 PF04324 BFD-like [2Fe-2S] binding domain JCR16_RS01570 PF01042 Endoribonuclease L-PSP JCR16_RS01575 PF13291 ACT domain JCR16_RS01575 PF04607 Region found in RelA / SpoT proteins JCR16_RS01575 PF02824 TGS domain JCR16_RS01585 PF01192 RNA polymerase Rpb6 JCR16_RS01590 PF00625 Guanylate kinase JCR16_RS01595 PF02401 LytB protein JCR16_RS01635 PF00886 Ribosomal protein S16 JCR16_RS01640 PF05239 PRC-barrel domain JCR16_RS01640 PF01782 RimM N-terminal domain JCR16_RS01645 PF01746 tRNA (Guanine-1)-methyltransferase JCR16_RS01650 PF01245 Ribosomal protein L19 JCR16_RS01655 PF00561 alpha/beta hydrolase fold JCR16_RS01660 PF03280 Proteobacterial lipase chaperone protein JCR16_RS01665 PF01509 TruB family pseudouridylate synthase (N terminal domain) JCR16_RS01665 PF09157 Pseudouridine synthase II TruB, C-terminal JCR16_RS01665 PF16198 tRNA pseudouridylate synthase B C-terminal domain JCR16_RS01670 PF01925 Sulfite exporter TauE/SafE JCR16_RS01680 PF00892 EamA-like transporter family JCR16_RS01685 PF00892 EamA-like transporter family JCR16_RS01690 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JCR16_RS01690 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JCR16_RS01695 PF02913 FAD linked oxidases, C-terminal domain JCR16_RS01695 PF01565 FAD binding domain JCR16_RS01705 PF03992 Antibiotic biosynthesis monooxygenase JCR16_RS01710 PF02525 Flavodoxin-like fold JCR16_RS01720 PF07690 Major Facilitator Superfamily JCR16_RS01725 PF12805 FUSC-like inner membrane protein yccS JCR16_RS01730 PF00080 Copper/zinc superoxide dismutase (SODC) JCR16_RS01735 PF01594 AI-2E family transporter JCR16_RS01740 PF13614 AAA domain JCR16_RS01770 PF00324 Amino acid permease JCR16_RS01775 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JCR16_RS01775 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JCR16_RS01780 PF00202 Aminotransferase class-III JCR16_RS01785 PF04958 Arginine N-succinyltransferase beta subunit JCR16_RS01790 PF00171 Aldehyde dehydrogenase family JCR16_RS01795 PF04996 Succinylarginine dihydrolase JCR16_RS01800 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family JCR16_RS01815 PF05922 Peptidase inhibitor I9 JCR16_RS01815 PF00082 Subtilase family JCR16_RS01830 PF03466 LysR substrate binding domain JCR16_RS01830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR16_RS01835 PF00892 EamA-like transporter family JCR16_RS01845 PF05746 DALR anticodon binding domain JCR16_RS01845 PF02092 Glycyl-tRNA synthetase beta subunit JCR16_RS01850 PF02091 Glycyl-tRNA synthetase alpha subunit JCR16_RS01875 PF00571 CBS domain JCR16_RS01880 PF04024 PspC domain JCR16_RS01890 PF02770 Acyl-CoA dehydrogenase, middle domain JCR16_RS01890 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR16_RS01890 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR16_RS01890 PF12806 Acetyl-CoA dehydrogenase C-terminal like JCR16_RS01900 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JCR16_RS01900 PF08501 Shikimate dehydrogenase substrate binding domain JCR16_RS01900 PF01488 Shikimate / quinate 5-dehydrogenase JCR16_RS01905 PF01218 Coproporphyrinogen III oxidase JCR16_RS01910 PF00925 GTP cyclohydrolase II JCR16_RS01915 PF02780 Transketolase, C-terminal domain JCR16_RS01915 PF02779 Transketolase, pyrimidine binding domain JCR16_RS01915 PF13292 1-deoxy-D-xylulose-5-phosphate synthase JCR16_RS01920 PF00459 Inositol monophosphatase family JCR16_RS01925 PF00270 DEAD/DEAH box helicase JCR16_RS01925 PF03880 DbpA RNA binding domain JCR16_RS01925 PF12343 Cold shock protein DEAD box A JCR16_RS01925 PF00271 Helicase conserved C-terminal domain JCR16_RS01935 PF00005 ABC transporter JCR16_RS01940 PF02405 Permease MlaE JCR16_RS01950 PF05494 MlaC protein JCR16_RS01960 PF01544 CorA-like Mg2+ transporter protein JCR16_RS01965 PF03641 Possible lysine decarboxylase JCR16_RS01970 PF00293 NUDIX domain JCR16_RS01975 PF00156 Phosphoribosyl transferase domain JCR16_RS01980 PF00270 DEAD/DEAH box helicase JCR16_RS01980 PF00271 Helicase conserved C-terminal domain JCR16_RS01980 PF17191 RecG wedge domain JCR16_RS01995 PF01553 Acyltransferase JCR16_RS02005 PF00375 Sodium:dicarboxylate symporter family JCR16_RS02015 PF01926 50S ribosome-binding GTPase JCR16_RS02020 PF02082 Transcriptional regulator JCR16_RS02025 PF00970 Oxidoreductase FAD-binding domain JCR16_RS02025 PF00175 Oxidoreductase NAD-binding domain JCR16_RS02025 PF00042 Globin JCR16_RS02030 PF05872 Bacterial protein of unknown function (DUF853) JCR16_RS02035 PF01053 Cys/Met metabolism PLP-dependent enzyme JCR16_RS02040 PF00117 Glutamine amidotransferase class-I JCR16_RS02045 PF00338 Ribosomal protein S10p/S20e JCR16_RS02050 PF00297 Ribosomal protein L3 JCR16_RS02055 PF00573 Ribosomal protein L4/L1 family JCR16_RS02060 PF00276 Ribosomal protein L23 JCR16_RS02065 PF00181 Ribosomal Proteins L2, RNA binding domain JCR16_RS02065 PF03947 Ribosomal Proteins L2, C-terminal domain JCR16_RS02070 PF00203 Ribosomal protein S19 JCR16_RS02075 PF00237 Ribosomal protein L22p/L17e JCR16_RS02080 PF00189 Ribosomal protein S3, C-terminal domain JCR16_RS02080 PF07650 KH domain JCR16_RS02085 PF00252 Ribosomal protein L16p/L10e JCR16_RS02090 PF00831 Ribosomal L29 protein JCR16_RS02095 PF00366 Ribosomal protein S17 JCR16_RS02100 PF00238 Ribosomal protein L14p/L23e JCR16_RS02105 PF00467 KOW motif JCR16_RS02105 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JCR16_RS02110 PF00281 Ribosomal protein L5 JCR16_RS02110 PF00673 ribosomal L5P family C-terminus JCR16_RS02115 PF00253 Ribosomal protein S14p/S29e JCR16_RS02120 PF00410 Ribosomal protein S8 JCR16_RS02125 PF00347 Ribosomal protein L6 JCR16_RS02130 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JCR16_RS02135 PF03719 Ribosomal protein S5, C-terminal domain JCR16_RS02135 PF00333 Ribosomal protein S5, N-terminal domain JCR16_RS02140 PF00327 Ribosomal protein L30p/L7e JCR16_RS02145 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JCR16_RS02150 PF00344 SecY translocase JCR16_RS02155 PF00444 Ribosomal protein L36 JCR16_RS02160 PF00416 Ribosomal protein S13/S18 JCR16_RS02165 PF00411 Ribosomal protein S11 JCR16_RS02170 PF01479 S4 domain JCR16_RS02170 PF00163 Ribosomal protein S4/S9 N-terminal domain JCR16_RS02175 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JCR16_RS02175 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JCR16_RS02175 PF01000 RNA polymerase Rpb3/RpoA insert domain JCR16_RS02180 PF01196 Ribosomal protein L17 JCR16_RS02185 PF00743 Flavin-binding monooxygenase-like JCR16_RS02190 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR16_RS02190 PF02770 Acyl-CoA dehydrogenase, middle domain JCR16_RS02190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR16_RS02195 PF03937 Flavinator of succinate dehydrogenase JCR16_RS02225 PF09526 Probable metal-binding protein (DUF2387) JCR16_RS02230 PF01432 Peptidase family M3 JCR16_RS02235 PF08461 Ribonuclease R winged-helix domain JCR16_RS02235 PF08206 Ribonuclease B OB domain JCR16_RS02235 PF00773 RNB domain JCR16_RS02235 PF00575 S1 RNA binding domain JCR16_RS02235 PF17876 Cold shock domain JCR16_RS02280 PF01557 Fumarylacetoacetate (FAA) hydrolase family JCR16_RS02285 PF12833 Helix-turn-helix domain JCR16_RS02290 PF00892 EamA-like transporter family JCR16_RS02295 PF03631 Virulence factor BrkB JCR16_RS02300 PF03358 NADPH-dependent FMN reductase JCR16_RS02325 PF02130 Uncharacterized protein family UPF0054 JCR16_RS02330 PF02562 PhoH-like protein JCR16_RS02335 PF00919 Uncharacterized protein family UPF0004 JCR16_RS02335 PF01938 TRAM domain JCR16_RS02335 PF04055 Radical SAM superfamily JCR16_RS02340 PF01464 Transglycosylase SLT domain JCR16_RS02340 PF01551 Peptidase family M23 JCR16_RS02340 PF10145 Phage-related minor tail protein JCR16_RS02350 PF00056 lactate/malate dehydrogenase, NAD binding domain JCR16_RS02350 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JCR16_RS02370 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ JCR16_RS02375 PF01066 CDP-alcohol phosphatidyltransferase JCR16_RS02420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR16_RS02420 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR16_RS02420 PF02770 Acyl-CoA dehydrogenase, middle domain JCR16_RS02425 PF00440 Bacterial regulatory proteins, tetR family JCR16_RS02425 PF17932 Tetracyclin repressor-like, C-terminal domain JCR16_RS02440 PF01039 Carboxyl transferase domain JCR16_RS02445 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR16_RS02445 PF02770 Acyl-CoA dehydrogenase, middle domain JCR16_RS02445 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR16_RS02455 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JCR16_RS02455 PF00364 Biotin-requiring enzyme JCR16_RS02455 PF00289 Biotin carboxylase, N-terminal domain JCR16_RS02455 PF02785 Biotin carboxylase C-terminal domain JCR16_RS02465 PF04386 Stringent starvation protein B JCR16_RS02470 PF13417 Glutathione S-transferase, N-terminal domain JCR16_RS02470 PF00043 Glutathione S-transferase, C-terminal domain JCR16_RS02475 PF00380 Ribosomal protein S9/S16 JCR16_RS02480 PF00572 Ribosomal protein L13 JCR16_RS02485 PF04166 Pyridoxal phosphate biosynthetic protein PdxA JCR16_RS02490 PF00398 Ribosomal RNA adenine dimethylase JCR16_RS02495 PF00149 Calcineurin-like phosphoesterase JCR16_RS02515 PF13167 GTP-binding GTPase N-terminal JCR16_RS02515 PF01926 50S ribosome-binding GTPase JCR16_RS02515 PF16360 GTP-binding GTPase Middle Region JCR16_RS02525 PF13091 PLD-like domain JCR16_RS02530 PF00149 Calcineurin-like phosphoesterase JCR16_RS02530 PF10518 TAT (twin-arginine translocation) pathway signal sequence JCR16_RS02535 PF00691 OmpA family JCR16_RS02535 PF01389 OmpA-like transmembrane domain JCR16_RS02540 PF00990 Diguanylate cyclase, GGDEF domain JCR16_RS02540 PF17152 Periplasmic sensor domain JCR16_RS02575 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR16_RS02575 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCR16_RS02585 PF00753 Metallo-beta-lactamase superfamily JCR16_RS02585 PF04273 Putative phosphatase (DUF442) JCR16_RS02590 PF00561 alpha/beta hydrolase fold JCR16_RS02595 PF00085 Thioredoxin JCR16_RS02600 PF03061 Thioesterase superfamily JCR16_RS02610 PF04461 Protein of unknown function (DUF520) JCR16_RS02620 PF01266 FAD dependent oxidoreductase JCR16_RS02620 PF05430 S-adenosyl-L-methionine-dependent methyltransferase JCR16_RS02630 PF03795 YCII-related domain JCR16_RS02635 PF04279 Intracellular septation protein A JCR16_RS02640 PF02811 PHP domain JCR16_RS02645 PF01062 Bestrophin, RFP-TM, chloride channel JCR16_RS02650 PF04002 RadC-like JAB domain JCR16_RS02655 PF02441 Flavoprotein JCR16_RS02655 PF04127 DNA / pantothenate metabolism flavoprotein JCR16_RS02660 PF02355 Protein export membrane protein JCR16_RS02660 PF07549 SecD/SecF GG Motif JCR16_RS02665 PF13721 SecD export protein N-terminal TM region JCR16_RS02665 PF07549 SecD/SecF GG Motif JCR16_RS02665 PF02355 Protein export membrane protein JCR16_RS02670 PF02699 Preprotein translocase subunit JCR16_RS02675 PF01702 Queuine tRNA-ribosyltransferase JCR16_RS02690 PF02547 Queuosine biosynthesis protein JCR16_RS02700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR16_RS02700 PF07689 KaiB domain JCR16_RS02700 PF00512 His Kinase A (phospho-acceptor) domain JCR16_RS02705 PF08335 GlnD PII-uridylyltransferase JCR16_RS02705 PF03710 Glutamate-ammonia ligase adenylyltransferase JCR16_RS02710 PF01063 Amino-transferase class IV JCR16_RS02725 PF01522 Polysaccharide deacetylase JCR16_RS02730 PF00535 Glycosyl transferase family 2 JCR16_RS02735 PF00534 Glycosyl transferases group 1 JCR16_RS02735 PF13439 Glycosyltransferase Family 4 JCR16_RS02760 PF11380 Stealth protein CR2, conserved region 2 JCR16_RS02760 PF17101 Stealth protein CR1, conserved region 1 JCR16_RS02760 PF17102 Stealth protein CR3, conserved region 3 JCR16_RS02765 PF00152 tRNA synthetases class II (D, K and N) JCR16_RS02765 PF01336 OB-fold nucleic acid binding domain JCR16_RS02765 PF02938 GAD domain JCR16_RS02775 PF00593 TonB dependent receptor JCR16_RS02775 PF07715 TonB-dependent Receptor Plug Domain JCR16_RS02795 PF06146 Phosphate-starvation-inducible E JCR16_RS02800 PF02798 Glutathione S-transferase, N-terminal domain JCR16_RS02800 PF00043 Glutathione S-transferase, C-terminal domain JCR16_RS02805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR16_RS02805 PF03466 LysR substrate binding domain JCR16_RS02810 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR16_RS02810 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR16_RS02810 PF02770 Acyl-CoA dehydrogenase, middle domain JCR16_RS02810 PF12806 Acetyl-CoA dehydrogenase C-terminal like JCR16_RS02815 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR16_RS02815 PF12806 Acetyl-CoA dehydrogenase C-terminal like JCR16_RS02815 PF02770 Acyl-CoA dehydrogenase, middle domain JCR16_RS02815 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR16_RS02825 PF00672 HAMP domain JCR16_RS02825 PF00512 His Kinase A (phospho-acceptor) domain JCR16_RS02825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR16_RS02830 PF00072 Response regulator receiver domain JCR16_RS02830 PF00486 Transcriptional regulatory protein, C terminal JCR16_RS02835 PF02696 Uncharacterized ACR, YdiU/UPF0061 family JCR16_RS02855 PF01923 Cobalamin adenosyltransferase JCR16_RS02860 PF07715 TonB-dependent Receptor Plug Domain JCR16_RS02860 PF00593 TonB dependent receptor JCR16_RS02865 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase JCR16_RS02870 PF00291 Pyridoxal-phosphate dependent enzyme JCR16_RS02895 PF00290 Tryptophan synthase alpha chain JCR16_RS02900 PF01039 Carboxyl transferase domain JCR16_RS02905 PF08245 Mur ligase middle domain JCR16_RS02905 PF02875 Mur ligase family, glutamate ligase domain JCR16_RS02920 PF00753 Metallo-beta-lactamase superfamily JCR16_RS02925 PF10417 C-terminal domain of 1-Cys peroxiredoxin JCR16_RS02925 PF00578 AhpC/TSA family JCR16_RS02930 PF01043 SecA preprotein cross-linking domain JCR16_RS02930 PF07516 SecA Wing and Scaffold domain JCR16_RS02930 PF07517 SecA DEAD-like domain JCR16_RS02930 PF02810 SEC-C motif JCR16_RS02940 PF00083 Sugar (and other) transporter JCR16_RS02940 PF07690 Major Facilitator Superfamily JCR16_RS02945 PF03006 Haemolysin-III related JCR16_RS02970 PF00378 Enoyl-CoA hydratase/isomerase JCR16_RS02970 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JCR16_RS02970 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JCR16_RS02975 PF00108 Thiolase, N-terminal domain JCR16_RS02975 PF02803 Thiolase, C-terminal domain JCR16_RS02980 PF02311 AraC-like ligand binding domain JCR16_RS02980 PF12833 Helix-turn-helix domain JCR16_RS02985 PF02515 CoA-transferase family III JCR16_RS02990 PF04966 Carbohydrate-selective porin, OprB family JCR16_RS02995 PF01011 PQQ enzyme repeat JCR16_RS03000 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JCR16_RS03000 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JCR16_RS03010 PF00893 Small Multidrug Resistance protein JCR16_RS03020 PF02803 Thiolase, C-terminal domain JCR16_RS03020 PF00108 Thiolase, N-terminal domain JCR16_RS03030 PF13505 Outer membrane protein beta-barrel domain JCR16_RS03030 PF00691 OmpA family JCR16_RS03040 PF01139 tRNA-splicing ligase RtcB JCR16_RS03045 PF00324 Amino acid permease JCR16_RS03050 PF08468 Methyltransferase small domain N-terminal JCR16_RS03050 PF05175 Methyltransferase small domain JCR16_RS03055 PF00860 Permease family JCR16_RS03060 PF03144 Elongation factor Tu domain 2 JCR16_RS03060 PF00009 Elongation factor Tu GTP binding domain JCR16_RS03060 PF00679 Elongation factor G C-terminus JCR16_RS03065 PF01741 Large-conductance mechanosensitive channel, MscL JCR16_RS03080 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JCR16_RS03080 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JCR16_RS03080 PF06827 Zinc finger found in FPG and IleRS JCR16_RS03085 PF02245 Methylpurine-DNA glycosylase (MPG) JCR16_RS03090 PF00593 TonB dependent receptor JCR16_RS03090 PF07715 TonB-dependent Receptor Plug Domain JCR16_RS03105 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JCR16_RS03110 PF03547 Membrane transport protein JCR16_RS03120 PF13098 Thioredoxin-like domain JCR16_RS03120 PF10411 Disulfide bond isomerase protein N-terminus JCR16_RS03125 PF01571 Aminomethyltransferase folate-binding domain JCR16_RS03135 PF04343 Protein of unknown function, DUF488 JCR16_RS03140 PF03831 PhnA domain JCR16_RS03140 PF08274 PhnA Zinc-Ribbon JCR16_RS03145 PF07411 Domain of unknown function (DUF1508) JCR16_RS03150 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JCR16_RS03150 PF04073 Aminoacyl-tRNA editing domain JCR16_RS03150 PF03129 Anticodon binding domain JCR16_RS03155 PF00873 AcrB/AcrD/AcrF family JCR16_RS03170 PF00072 Response regulator receiver domain JCR16_RS03175 PF00072 Response regulator receiver domain JCR16_RS03180 PF01584 CheW-like domain JCR16_RS03185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JCR16_RS03185 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term JCR16_RS03190 PF01584 CheW-like domain JCR16_RS03190 PF00072 Response regulator receiver domain JCR16_RS03190 PF01627 Hpt domain JCR16_RS03190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR16_RS03200 PF07687 Peptidase dimerisation domain JCR16_RS03200 PF01546 Peptidase family M20/M25/M40 JCR16_RS03205 PF08085 Entericidin EcnA/B family JCR16_RS03215 PF04304 Protein of unknown function (DUF454) JCR16_RS03220 PF03734 L,D-transpeptidase catalytic domain JCR16_RS03220 PF17969 L,D-transpeptidase C-terminal domain JCR16_RS03260 PF00175 Oxidoreductase NAD-binding domain JCR16_RS03260 PF00667 FAD binding domain JCR16_RS03260 PF00258 Flavodoxin JCR16_RS03270 PF12805 FUSC-like inner membrane protein yccS JCR16_RS03275 PF07690 Major Facilitator Superfamily JCR16_RS03280 PF00881 Nitroreductase family JCR16_RS03295 PF01235 Sodium:alanine symporter family JCR16_RS03300 PF01734 Patatin-like phospholipase JCR16_RS03305 PF13291 ACT domain JCR16_RS03305 PF00291 Pyridoxal-phosphate dependent enzyme JCR16_RS03310 PF05992 SbmA/BacA-like family JCR16_RS03340 PF02637 GatB domain JCR16_RS03340 PF02934 GatB/GatE catalytic domain JCR16_RS03345 PF01425 Amidase JCR16_RS03350 PF02686 Glu-tRNAGln amidotransferase C subunit JCR16_RS03360 PF04085 rod shape-determining protein MreC JCR16_RS03365 PF04093 rod shape-determining protein MreD JCR16_RS03370 PF02545 Maf-like protein JCR16_RS03375 PF10150 Ribonuclease E/G family JCR16_RS03375 PF00575 S1 RNA binding domain JCR16_RS03385 PF06974 Protein of unknown function (DUF1298) JCR16_RS03385 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain JCR16_RS03390 PF01507 Phosphoadenosine phosphosulfate reductase family JCR16_RS03405 PF02525 Flavodoxin-like fold JCR16_RS03425 PF02673 Bacitracin resistance protein BacA JCR16_RS03430 PF12833 Helix-turn-helix domain JCR16_RS03430 PF06719 AraC-type transcriptional regulator N-terminus JCR16_RS03435 PF08240 Alcohol dehydrogenase GroES-like domain JCR16_RS03435 PF08990 Erythronolide synthase docking JCR16_RS03435 PF16197 Ketoacyl-synthetase C-terminal extension JCR16_RS03435 PF00109 Beta-ketoacyl synthase, N-terminal domain JCR16_RS03435 PF02801 Beta-ketoacyl synthase, C-terminal domain JCR16_RS03435 PF08659 KR domain JCR16_RS03435 PF14765 Polyketide synthase dehydratase JCR16_RS03435 PF00698 Acyl transferase domain JCR16_RS03435 PF09277 Erythronolide synthase, docking JCR16_RS03435 PF00550 Phosphopantetheine attachment site JCR16_RS03440 PF01965 DJ-1/PfpI family JCR16_RS03450 PF00324 Amino acid permease JCR16_RS03455 PF04303 PrpF protein JCR16_RS03460 PF00348 Polyprenyl synthetase JCR16_RS03465 PF04237 YjbR JCR16_RS03470 PF01145 SPFH domain / Band 7 family JCR16_RS03480 PF01734 Patatin-like phospholipase JCR16_RS03505 PF13737 Transposase DDE domain JCR16_RS03515 PF00072 Response regulator receiver domain JCR16_RS03515 PF00486 Transcriptional regulatory protein, C terminal JCR16_RS03520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR16_RS03520 PF08521 Two-component sensor kinase N-terminal JCR16_RS03520 PF00512 His Kinase A (phospho-acceptor) domain JCR16_RS03530 PF00909 Ammonium Transporter Family JCR16_RS03535 PF03466 LysR substrate binding domain JCR16_RS03535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR16_RS03555 PF10458 Valyl tRNA synthetase tRNA binding arm JCR16_RS03555 PF08264 Anticodon-binding domain of tRNA JCR16_RS03555 PF00133 tRNA synthetases class I (I, L, M and V) JCR16_RS03575 PF01906 Putative heavy-metal-binding JCR16_RS03580 PF01906 Putative heavy-metal-binding JCR16_RS03585 PF02321 Outer membrane efflux protein JCR16_RS03590 PF00873 AcrB/AcrD/AcrF family JCR16_RS03595 PF00529 HlyD membrane-fusion protein of T1SS JCR16_RS03595 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JCR16_RS03600 PF01569 PAP2 superfamily JCR16_RS03610 PF00348 Polyprenyl synthetase JCR16_RS03620 PF00829 Ribosomal prokaryotic L21 protein JCR16_RS03625 PF01016 Ribosomal L27 protein JCR16_RS03630 PF03548 Outer membrane lipoprotein carrier protein LolA JCR16_RS03640 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JCR16_RS03640 PF02403 Seryl-tRNA synthetase N-terminal domain JCR16_RS03645 PF10414 Sirohaem synthase dimerisation region JCR16_RS03645 PF14824 Sirohaem biosynthesis protein central JCR16_RS03645 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JCR16_RS03650 PF00588 SpoU rRNA Methylase family JCR16_RS03655 PF01638 HxlR-like helix-turn-helix JCR16_RS03660 PF03358 NADPH-dependent FMN reductase JCR16_RS03665 PF13520 Amino acid permease JCR16_RS03670 PF00465 Iron-containing alcohol dehydrogenase JCR16_RS03680 PF03099 Biotin/lipoate A/B protein ligase family JCR16_RS03685 PF04359 Protein of unknown function (DUF493) JCR16_RS03690 PF04539 Sigma-70 region 3 JCR16_RS03690 PF04542 Sigma-70 region 2 JCR16_RS03690 PF00140 Sigma-70 factor, region 1.2 JCR16_RS03690 PF03979 Sigma-70 factor, region 1.1 JCR16_RS03690 PF04546 Sigma-70, non-essential region JCR16_RS03690 PF04545 Sigma-70, region 4 JCR16_RS03710 PF17773 UPF0176 acylphosphatase like domain JCR16_RS03710 PF00581 Rhodanese-like domain JCR16_RS03720 PF00285 Citrate synthase, C-terminal domain JCR16_RS03725 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JCR16_RS03730 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JCR16_RS03735 PF02910 Fumarate reductase flavoprotein C-term JCR16_RS03735 PF00890 FAD binding domain JCR16_RS03740 PF13085 2Fe-2S iron-sulfur cluster binding domain JCR16_RS03755 PF16078 2-oxoglutarate dehydrogenase N-terminus JCR16_RS03755 PF16870 2-oxoglutarate dehydrogenase C-terminal JCR16_RS03755 PF00676 Dehydrogenase E1 component JCR16_RS03755 PF02779 Transketolase, pyrimidine binding domain JCR16_RS03760 PF02817 e3 binding domain JCR16_RS03760 PF00364 Biotin-requiring enzyme JCR16_RS03760 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JCR16_RS03765 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR16_RS03765 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCR16_RS03770 PF08442 ATP-grasp domain JCR16_RS03770 PF00549 CoA-ligase JCR16_RS03775 PF00549 CoA-ligase JCR16_RS03775 PF02629 CoA binding domain JCR16_RS03780 PF00579 tRNA synthetases class I (W and Y) JCR16_RS03785 PF05661 Protein of unknown function (DUF808) JCR16_RS03790 PF04228 Putative neutral zinc metallopeptidase JCR16_RS03795 PF00999 Sodium/hydrogen exchanger family JCR16_RS03830 PF09587 Bacterial capsule synthesis protein PGA_cap JCR16_RS03840 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JCR16_RS03845 PF00582 Universal stress protein family JCR16_RS03850 PF00132 Bacterial transferase hexapeptide (six repeats) JCR16_RS03855 PF01272 Transcription elongation factor, GreA/GreB, C-term JCR16_RS03855 PF03449 Transcription elongation factor, N-terminal JCR16_RS03860 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JCR16_RS03860 PF02142 MGS-like domain JCR16_RS03860 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JCR16_RS03865 PF00117 Glutamine amidotransferase class-I JCR16_RS03865 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JCR16_RS03880 PF01985 CRS1 / YhbY (CRM) domain JCR16_RS03885 PF01728 FtsJ-like methyltransferase JCR16_RS03890 PF01434 Peptidase family M41 JCR16_RS03890 PF06480 FtsH Extracellular JCR16_RS03890 PF17862 AAA+ lid domain JCR16_RS03890 PF00004 ATPase family associated with various cellular activities (AAA) JCR16_RS03895 PF00809 Pterin binding enzyme JCR16_RS03915 PF09423 PhoD-like phosphatase JCR16_RS03915 PF16655 PhoD-like phosphatase, N-terminal domain JCR16_RS03930 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JCR16_RS03930 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JCR16_RS03945 PF00083 Sugar (and other) transporter JCR16_RS03950 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JCR16_RS03950 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JCR16_RS03955 PF16901 C-terminal domain of alpha-glycerophosphate oxidase JCR16_RS03955 PF01266 FAD dependent oxidoreductase JCR16_RS03960 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain JCR16_RS03960 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain JCR16_RS03965 PF00781 Diacylglycerol kinase catalytic domain JCR16_RS03970 PF00149 Calcineurin-like phosphoesterase JCR16_RS03980 PF00166 Chaperonin 10 Kd subunit JCR16_RS03985 PF00118 TCP-1/cpn60 chaperonin family JCR16_RS03990 PF01219 Prokaryotic diacylglycerol kinase JCR16_RS04000 PF03009 Glycerophosphoryl diester phosphodiesterase family JCR16_RS04005 PF00873 AcrB/AcrD/AcrF family JCR16_RS04015 PF01435 Peptidase family M48 JCR16_RS04020 PF01464 Transglycosylase SLT domain JCR16_RS04025 PF01171 PP-loop family JCR16_RS04035 PF01464 Transglycosylase SLT domain JCR16_RS04035 PF00497 Bacterial extracellular solute-binding proteins, family 3 JCR16_RS04040 PF03449 Transcription elongation factor, N-terminal JCR16_RS04040 PF01272 Transcription elongation factor, GreA/GreB, C-term JCR16_RS04055 PF00550 Phosphopantetheine attachment site JCR16_RS04055 PF00975 Thioesterase domain JCR16_RS04055 PF13193 AMP-binding enzyme C-terminal domain JCR16_RS04055 PF00501 AMP-binding enzyme JCR16_RS04055 PF00668 Condensation domain JCR16_RS04105 PF00216 Bacterial DNA-binding protein JCR16_RS04130 PF01471 Putative peptidoglycan binding domain JCR16_RS04130 PF13401 AAA domain JCR16_RS04160 PF10502 Signal peptidase, peptidase S26 JCR16_RS04195 PF03237 Terminase-like family JCR16_RS04210 PF06074 Protein of unknown function (DUF935) JCR16_RS04215 PF04233 Phage Mu protein F like protein JCR16_RS04220 PF05069 Phage virion morphogenesis family JCR16_RS04235 PF10124 Mu-like prophage major head subunit gpT JCR16_RS04330 PF00881 Nitroreductase family JCR16_RS04345 PF02595 Glycerate kinase family JCR16_RS04350 PF00384 Molybdopterin oxidoreductase JCR16_RS04355 PF02634 FdhD/NarQ family JCR16_RS04360 PF06803 Protein of unknown function (DUF1232) JCR16_RS04365 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JCR16_RS04365 PF11890 Domain of unknown function (DUF3410) JCR16_RS04365 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JCR16_RS04370 PF00152 tRNA synthetases class II (D, K and N) JCR16_RS04380 PF18073 Rubredoxin metal binding domain JCR16_RS04385 PF00324 Amino acid permease JCR16_RS04395 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JCR16_RS04395 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JCR16_RS04400 PF01678 Diaminopimelate epimerase JCR16_RS04405 PF01810 LysE type translocator JCR16_RS04410 PF02899 Phage integrase, N-terminal SAM-like domain JCR16_RS04410 PF00589 Phage integrase family JCR16_RS04415 PF01012 Electron transfer flavoprotein domain JCR16_RS04420 PF00766 Electron transfer flavoprotein FAD-binding domain JCR16_RS04420 PF01012 Electron transfer flavoprotein domain JCR16_RS04425 PF03989 DNA gyrase C-terminal domain, beta-propeller JCR16_RS04425 PF00521 DNA gyrase/topoisomerase IV, subunit A JCR16_RS04440 PF00535 Glycosyl transferase family 2 JCR16_RS04460 PF13533 Biotin-lipoyl like JCR16_RS04470 PF00266 Aminotransferase class-V JCR16_RS04485 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 JCR16_RS04495 PF12704 MacB-like periplasmic core domain JCR16_RS04495 PF02687 FtsX-like permease family JCR16_RS04500 PF00005 ABC transporter JCR16_RS04505 PF03772 Competence protein JCR16_RS04505 PF13567 Domain of unknown function (DUF4131) JCR16_RS04505 PF00753 Metallo-beta-lactamase superfamily JCR16_RS04515 PF01343 Peptidase family S49 JCR16_RS04515 PF06965 Na+/H+ antiporter 1 JCR16_RS04520 PF12697 Alpha/beta hydrolase family JCR16_RS04525 PF00551 Formyl transferase JCR16_RS04530 PF00586 AIR synthase related protein, N-terminal domain JCR16_RS04530 PF02769 AIR synthase related protein, C-terminal domain JCR16_RS04535 PF01594 AI-2E family transporter JCR16_RS04540 PF11638 DnaA N-terminal domain JCR16_RS04540 PF08299 Bacterial dnaA protein helix-turn-helix JCR16_RS04540 PF00308 Bacterial dnaA protein JCR16_RS04575 PF08032 RNA 2'-O ribose methyltransferase substrate binding JCR16_RS04575 PF00588 SpoU rRNA Methylase family JCR16_RS04580 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain JCR16_RS04590 PF00691 OmpA family JCR16_RS04595 PF07676 WD40-like Beta Propeller Repeat JCR16_RS04595 PF04052 TolB amino-terminal domain JCR16_RS04605 PF02472 Biopolymer transport protein ExbD/TolR JCR16_RS04610 PF01618 MotA/TolQ/ExbB proton channel family JCR16_RS04615 PF03061 Thioesterase superfamily JCR16_RS04620 PF07687 Peptidase dimerisation domain JCR16_RS04620 PF01546 Peptidase family M20/M25/M40 JCR16_RS04625 PF05491 RuvB C-terminal winged helix domain JCR16_RS04625 PF17864 RuvB AAA lid domain JCR16_RS04625 PF05496 Holliday junction DNA helicase RuvB P-loop domain JCR16_RS04630 PF01330 RuvA N terminal domain JCR16_RS04630 PF07499 RuvA, C-terminal domain JCR16_RS04635 PF01966 HD domain JCR16_RS04640 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal JCR16_RS04640 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain JCR16_RS04640 PF02769 AIR synthase related protein, C-terminal domain JCR16_RS04645 PF07690 Major Facilitator Superfamily JCR16_RS04650 PF01784 NIF3 (NGG1p interacting factor 3) JCR16_RS04655 PF00378 Enoyl-CoA hydratase/isomerase JCR16_RS04660 PF01467 Cytidylyltransferase-like JCR16_RS04660 PF00293 NUDIX domain JCR16_RS04670 PF00578 AhpC/TSA family JCR16_RS04685 PF06508 Queuosine biosynthesis protein QueC JCR16_RS04695 PF00132 Bacterial transferase hexapeptide (six repeats) JCR16_RS04695 PF14602 Hexapeptide repeat of succinyl-transferase JCR16_RS04695 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal JCR16_RS04705 PF03466 LysR substrate binding domain JCR16_RS04705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR16_RS04710 PF00005 ABC transporter JCR16_RS04710 PF12857 TOBE-like domain JCR16_RS04715 PF00528 Binding-protein-dependent transport system inner membrane component JCR16_RS04720 PF00528 Binding-protein-dependent transport system inner membrane component JCR16_RS04735 PF01063 Amino-transferase class IV JCR16_RS04740 PF02618 YceG-like family JCR16_RS04745 PF02223 Thymidylate kinase JCR16_RS04755 PF02910 Fumarate reductase flavoprotein C-term JCR16_RS04755 PF00890 FAD binding domain JCR16_RS04760 PF13180 PDZ domain JCR16_RS04770 PF03144 Elongation factor Tu domain 2 JCR16_RS04770 PF06421 GTP-binding protein LepA C-terminus JCR16_RS04770 PF00009 Elongation factor Tu GTP binding domain JCR16_RS04770 PF00679 Elongation factor G C-terminus JCR16_RS04775 PF10502 Signal peptidase, peptidase S26 JCR16_RS04785 PF14622 Ribonuclease-III-like JCR16_RS04785 PF00035 Double-stranded RNA binding motif JCR16_RS04790 PF01926 50S ribosome-binding GTPase JCR16_RS04790 PF07650 KH domain JCR16_RS04800 PF02565 Recombination protein O C terminal JCR16_RS04800 PF11967 Recombination protein O N terminal JCR16_RS04805 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ JCR16_RS04810 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) JCR16_RS04815 PF00106 short chain dehydrogenase JCR16_RS04850 PF00155 Aminotransferase class I and II JCR16_RS04860 PF00990 Diguanylate cyclase, GGDEF domain JCR16_RS04860 PF17151 Periplasmic sensor domain JCR16_RS04870 PF00271 Helicase conserved C-terminal domain JCR16_RS04870 PF04851 Type III restriction enzyme, res subunit JCR16_RS04870 PF02151 UvrB/uvrC motif JCR16_RS04870 PF17757 UvrB interaction domain JCR16_RS04870 PF12344 Ultra-violet resistance protein B JCR16_RS04880 PF00892 EamA-like transporter family JCR16_RS04885 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JCR16_RS04885 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JCR16_RS04900 PF01018 GTP1/OBG JCR16_RS04900 PF01926 50S ribosome-binding GTPase JCR16_RS04905 PF00696 Amino acid kinase family JCR16_RS04905 PF01472 PUA domain JCR16_RS04915 PF07759 Protein of unknown function (DUF1615) JCR16_RS04920 PF01207 Dihydrouridine synthase (Dus) JCR16_RS04925 PF03060 Nitronate monooxygenase JCR16_RS04940 PF02350 UDP-N-acetylglucosamine 2-epimerase JCR16_RS04970 PF00875 DNA photolyase JCR16_RS04970 PF03441 FAD binding domain of DNA photolyase JCR16_RS04975 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JCR16_RS04980 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR16_RS04985 PF00768 D-alanyl-D-alanine carboxypeptidase JCR16_RS04985 PF07943 Penicillin-binding protein 5, C-terminal domain JCR16_RS04995 PF03971 Monomeric isocitrate dehydrogenase JCR16_RS05000 PF00849 RNA pseudouridylate synthase JCR16_RS05005 PF00180 Isocitrate/isopropylmalate dehydrogenase JCR16_RS05025 PF06779 Uncharacterised MFS-type transporter YbfB JCR16_RS05030 PF03466 LysR substrate binding domain JCR16_RS05030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR16_RS05035 PF00375 Sodium:dicarboxylate symporter family JCR16_RS05040 PF02567 Phenazine biosynthesis-like protein JCR16_RS05045 PF05193 Peptidase M16 inactive domain JCR16_RS05045 PF00675 Insulinase (Peptidase family M16) JCR16_RS05070 PF02581 Thiamine monophosphate synthase JCR16_RS05075 PF00202 Aminotransferase class-III JCR16_RS05085 PF00849 RNA pseudouridylate synthase JCR16_RS05090 PF18337 RapA N-terminal Tudor like domain JCR16_RS05090 PF18339 RapA N-terminal Tudor like domain 1 JCR16_RS05090 PF00176 SNF2 family N-terminal domain JCR16_RS05090 PF12137 RNA polymerase recycling family C-terminal JCR16_RS05090 PF00271 Helicase conserved C-terminal domain JCR16_RS05100 PF00440 Bacterial regulatory proteins, tetR family JCR16_RS05105 PF00111 2Fe-2S iron-sulfur cluster binding domain JCR16_RS05105 PF00970 Oxidoreductase FAD-binding domain JCR16_RS05105 PF00175 Oxidoreductase NAD-binding domain JCR16_RS05110 PF00487 Fatty acid desaturase JCR16_RS05120 PF17754 MftR C-terminal domain JCR16_RS05120 PF00440 Bacterial regulatory proteins, tetR family JCR16_RS05130 PF00202 Aminotransferase class-III JCR16_RS05135 PF00282 Pyridoxal-dependent decarboxylase conserved domain JCR16_RS05140 PF00171 Aldehyde dehydrogenase family JCR16_RS05145 PF01037 Lrp/AsnC ligand binding domain JCR16_RS05150 PF00205 Thiamine pyrophosphate enzyme, central domain JCR16_RS05150 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JCR16_RS05150 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JCR16_RS05155 PF00324 Amino acid permease JCR16_RS05160 PF12849 PBP superfamily domain JCR16_RS05165 PF00528 Binding-protein-dependent transport system inner membrane component JCR16_RS05170 PF00528 Binding-protein-dependent transport system inner membrane component JCR16_RS05175 PF00005 ABC transporter JCR16_RS05180 PF01343 Peptidase family S49 JCR16_RS05180 PF08496 Peptidase family S49 N-terminal JCR16_RS05195 PF00206 Lyase JCR16_RS05195 PF08328 Adenylosuccinate lyase C-terminal JCR16_RS05200 PF04356 Protein of unknown function (DUF489) JCR16_RS05210 PF00293 NUDIX domain JCR16_RS05210 PF13344 Haloacid dehalogenase-like hydrolase JCR16_RS05215 PF00132 Bacterial transferase hexapeptide (six repeats) JCR16_RS05220 PF00768 D-alanyl-D-alanine carboxypeptidase JCR16_RS05220 PF07943 Penicillin-binding protein 5, C-terminal domain JCR16_RS05235 PF01975 Survival protein SurE JCR16_RS05240 PF01476 LysM domain JCR16_RS05240 PF01551 Peptidase family M23 JCR16_RS05245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR16_RS05245 PF03466 LysR substrate binding domain JCR16_RS05250 PF13654 AAA domain JCR16_RS05250 PF05362 Lon protease (S16) C-terminal proteolytic domain JCR16_RS05255 PF07690 Major Facilitator Superfamily JCR16_RS05260 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JCR16_RS05265 PF13593 SBF-like CPA transporter family (DUF4137) JCR16_RS05270 PF01197 Ribosomal protein L31 JCR16_RS05285 PF04055 Radical SAM superfamily JCR16_RS05290 PF09285 Elongation factor P, C-terminal JCR16_RS05290 PF01132 Elongation factor P (EF-P) OB domain JCR16_RS05290 PF08207 Elongation factor P (EF-P) KOW-like domain JCR16_RS05295 PF13722 5TM C-terminal transporter carbon starvation CstA JCR16_RS05295 PF02554 Carbon starvation protein CstA JCR16_RS05300 PF04328 Selenoprotein, putative JCR16_RS05330 PF06018 CodY GAF-like domain JCR16_RS05330 PF17853 GGDEF-like domain JCR16_RS05330 PF13556 PucR C-terminal helix-turn-helix domain JCR16_RS05345 PF00171 Aldehyde dehydrogenase family JCR16_RS05350 PF00324 Amino acid permease JCR16_RS05355 PF03466 LysR substrate binding domain JCR16_RS05355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR16_RS05360 PF02028 BCCT, betaine/carnitine/choline family transporter JCR16_RS05365 PF02028 BCCT, betaine/carnitine/choline family transporter JCR16_RS05370 PF00355 Rieske [2Fe-2S] domain JCR16_RS05370 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JCR16_RS05375 PF00171 Aldehyde dehydrogenase family JCR16_RS05380 PF18113 Rubredoxin binding C-terminal domain JCR16_RS05380 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR16_RS05385 PF01266 FAD dependent oxidoreductase JCR16_RS05385 PF05430 S-adenosyl-L-methionine-dependent methyltransferase JCR16_RS05405 PF00892 EamA-like transporter family JCR16_RS05415 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system JCR16_RS05420 PF00083 Sugar (and other) transporter JCR16_RS05425 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JCR16_RS05425 PF13378 Enolase C-terminal domain-like JCR16_RS05430 PF14765 Polyketide synthase dehydratase JCR16_RS05430 PF08659 KR domain JCR16_RS05430 PF02801 Beta-ketoacyl synthase, C-terminal domain JCR16_RS05430 PF00550 Phosphopantetheine attachment site JCR16_RS05430 PF00109 Beta-ketoacyl synthase, N-terminal domain JCR16_RS05430 PF00698 Acyl transferase domain JCR16_RS05430 PF09277 Erythronolide synthase, docking JCR16_RS05430 PF08990 Erythronolide synthase docking JCR16_RS05430 PF08240 Alcohol dehydrogenase GroES-like domain JCR16_RS05430 PF16197 Ketoacyl-synthetase C-terminal extension JCR16_RS05435 PF00440 Bacterial regulatory proteins, tetR family JCR16_RS05455 PF02678 Pirin JCR16_RS05455 PF17954 Quercetinase C-terminal cupin domain JCR16_RS05465 PF13309 HTH domain JCR16_RS05465 PF08348 YheO-like PAS domain JCR16_RS05475 PF00501 AMP-binding enzyme JCR16_RS05475 PF13193 AMP-binding enzyme C-terminal domain JCR16_RS05475 PF00550 Phosphopantetheine attachment site JCR16_RS05475 PF00668 Condensation domain JCR16_RS05480 PF00668 Condensation domain JCR16_RS05480 PF00550 Phosphopantetheine attachment site JCR16_RS05480 PF00975 Thioesterase domain JCR16_RS05480 PF13193 AMP-binding enzyme C-terminal domain JCR16_RS05480 PF00501 AMP-binding enzyme JCR16_RS05485 PF01032 FecCD transport family JCR16_RS05490 PF01032 FecCD transport family JCR16_RS05495 PF00005 ABC transporter JCR16_RS05500 PF01497 Periplasmic binding protein JCR16_RS05505 PF07715 TonB-dependent Receptor Plug Domain JCR16_RS05505 PF00593 TonB dependent receptor JCR16_RS05510 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) JCR16_RS05515 PF00550 Phosphopantetheine attachment site JCR16_RS05515 PF00668 Condensation domain JCR16_RS05515 PF00501 AMP-binding enzyme JCR16_RS05520 PF00501 AMP-binding enzyme JCR16_RS05520 PF13193 AMP-binding enzyme C-terminal domain JCR16_RS05525 PF00550 Phosphopantetheine attachment site JCR16_RS05525 PF00857 Isochorismatase family JCR16_RS05530 PF00282 Pyridoxal-dependent decarboxylase conserved domain JCR16_RS05540 PF00005 ABC transporter JCR16_RS05545 PF00005 ABC transporter JCR16_RS05570 PF00425 chorismate binding enzyme JCR16_RS05580 PF01208 Uroporphyrinogen decarboxylase (URO-D) JCR16_RS05585 PF05675 Protein of unknown function (DUF817) JCR16_RS05600 PF00144 Beta-lactamase JCR16_RS05610 PF01227 GTP cyclohydrolase I JCR16_RS05615 PF01799 [2Fe-2S] binding domain JCR16_RS05615 PF00111 2Fe-2S iron-sulfur cluster binding domain JCR16_RS05620 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JCR16_RS05620 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JCR16_RS05635 PF00218 Indole-3-glycerol phosphate synthase JCR16_RS05640 PF02885 Glycosyl transferase family, helical bundle domain JCR16_RS05640 PF00591 Glycosyl transferase family, a/b domain JCR16_RS05645 PF00593 TonB dependent receptor JCR16_RS05645 PF07715 TonB-dependent Receptor Plug Domain JCR16_RS05650 PF11838 ERAP1-like C-terminal domain JCR16_RS05650 PF01433 Peptidase family M1 domain JCR16_RS05655 PF00117 Glutamine amidotransferase class-I JCR16_RS05745 PF01555 DNA methylase JCR16_RS05775 PF01555 DNA methylase JCR16_RS06120 PF02384 N-6 DNA Methylase JCR16_RS06120 PF12161 HsdM N-terminal domain JCR16_RS06335 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system JCR16_RS06390 PF00589 Phage integrase family JCR16_RS06390 PF13356 Arm DNA-binding domain JCR16_RS06400 PF00854 POT family JCR16_RS06405 PF00120 Glutamine synthetase, catalytic domain JCR16_RS06405 PF03951 Glutamine synthetase, beta-Grasp domain JCR16_RS06410 PF04345 Chorismate lyase JCR16_RS06415 PF01040 UbiA prenyltransferase family JCR16_RS06450 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JCR16_RS06450 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JCR16_RS06455 PF01784 NIF3 (NGG1p interacting factor 3) JCR16_RS06460 PF13180 PDZ domain JCR16_RS06465 PF12627 Probable RNA and SrmB- binding site of polymerase A JCR16_RS06465 PF01743 Poly A polymerase head domain JCR16_RS06470 PF01515 Phosphate acetyl/butaryl transferase JCR16_RS06470 PF03949 Malic enzyme, NAD binding domain JCR16_RS06470 PF00390 Malic enzyme, N-terminal domain JCR16_RS06475 PF00990 Diguanylate cyclase, GGDEF domain JCR16_RS06475 PF03707 Bacterial signalling protein N terminal repeat JCR16_RS06475 PF00563 EAL domain JCR16_RS06480 PF04452 RNA methyltransferase JCR16_RS06485 PF02219 Methylenetetrahydrofolate reductase JCR16_RS06490 PF05221 S-adenosyl-L-homocysteine hydrolase JCR16_RS06490 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain JCR16_RS06505 PF09317 Domain of unknown function (DUF1974) JCR16_RS06505 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR16_RS06505 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR16_RS06510 PF04055 Radical SAM superfamily JCR16_RS06515 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR16_RS06515 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCR16_RS06525 PF07690 Major Facilitator Superfamily JCR16_RS06535 PF00557 Metallopeptidase family M24 JCR16_RS06540 PF00318 Ribosomal protein S2 JCR16_RS06545 PF00889 Elongation factor TS JCR16_RS06555 PF12833 Helix-turn-helix domain JCR16_RS06575 PF03330 Lytic transglycolase JCR16_RS06575 PF05036 Sporulation related domain JCR16_RS06580 PF13406 Transglycosylase SLT domain JCR16_RS06585 PF01098 Cell cycle protein JCR16_RS06595 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term JCR16_RS06595 PF14489 QueF-like protein JCR16_RS06600 PF01061 ABC-2 type transporter JCR16_RS06605 PF00005 ABC transporter JCR16_RS06635 PF00464 Serine hydroxymethyltransferase JCR16_RS06640 PF02321 Outer membrane efflux protein JCR16_RS06645 PF00873 AcrB/AcrD/AcrF family JCR16_RS06650 PF13533 Biotin-lipoyl like JCR16_RS06655 PF03466 LysR substrate binding domain JCR16_RS06655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR16_RS06660 PF00497 Bacterial extracellular solute-binding proteins, family 3 JCR16_RS06665 PF00528 Binding-protein-dependent transport system inner membrane component JCR16_RS06670 PF00528 Binding-protein-dependent transport system inner membrane component JCR16_RS06675 PF00005 ABC transporter JCR16_RS06680 PF00893 Small Multidrug Resistance protein JCR16_RS06685 PF00037 4Fe-4S binding domain JCR16_RS06690 PF01136 Peptidase family U32 JCR16_RS06690 PF16325 Peptidase family U32 C-terminal domain JCR16_RS06695 PF00392 Bacterial regulatory proteins, gntR family JCR16_RS06695 PF00155 Aminotransferase class I and II JCR16_RS06700 PF02567 Phenazine biosynthesis-like protein JCR16_RS06705 PF00175 Oxidoreductase NAD-binding domain JCR16_RS06705 PF00970 Oxidoreductase FAD-binding domain JCR16_RS06710 PF18389 TrmO C-terminal domain JCR16_RS06710 PF01980 tRNA-methyltransferase O JCR16_RS06720 PF00437 Type II/IV secretion system protein JCR16_RS06720 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JCR16_RS06730 PF00486 Transcriptional regulatory protein, C terminal JCR16_RS06730 PF00072 Response regulator receiver domain JCR16_RS06735 PF08521 Two-component sensor kinase N-terminal JCR16_RS06735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR16_RS06735 PF00512 His Kinase A (phospho-acceptor) domain JCR16_RS06745 PF00293 NUDIX domain JCR16_RS06755 PF00912 Transglycosylase JCR16_RS06755 PF14814 Bifunctional transglycosylase second domain JCR16_RS06755 PF00905 Penicillin binding protein transpeptidase domain JCR16_RS06760 PF01513 ATP-NAD kinase JCR16_RS06765 PF07023 Protein of unknown function (DUF1315) JCR16_RS06770 PF02885 Glycosyl transferase family, helical bundle domain JCR16_RS06770 PF00591 Glycosyl transferase family, a/b domain JCR16_RS06775 PF00375 Sodium:dicarboxylate symporter family JCR16_RS06780 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR16_RS06780 PF02770 Acyl-CoA dehydrogenase, middle domain JCR16_RS06780 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR16_RS06785 PF00756 Putative esterase JCR16_RS06790 PF01842 ACT domain JCR16_RS06790 PF00800 Prephenate dehydratase JCR16_RS06790 PF01817 Chorismate mutase type II JCR16_RS06795 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JCR16_RS06810 PF12706 Beta-lactamase superfamily domain JCR16_RS06820 PF03883 Peroxide stress protein YaaA JCR16_RS06830 PF05690 Thiazole biosynthesis protein ThiG JCR16_RS06840 PF04241 Protein of unknown function (DUF423) JCR16_RS06845 PF04542 Sigma-70 region 2 JCR16_RS06845 PF00140 Sigma-70 factor, region 1.2 JCR16_RS06845 PF04545 Sigma-70, region 4 JCR16_RS06855 PF00313 'Cold-shock' DNA-binding domain JCR16_RS06860 PF00270 DEAD/DEAH box helicase JCR16_RS06860 PF00271 Helicase conserved C-terminal domain JCR16_RS06870 PF00881 Nitroreductase family JCR16_RS06875 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JCR16_RS06875 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JCR16_RS06895 PF01180 Dihydroorotate dehydrogenase JCR16_RS06900 PF02674 Colicin V production protein JCR16_RS06905 PF00156 Phosphoribosyl transferase domain JCR16_RS06920 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JCR16_RS06920 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JCR16_RS06925 PF01435 Peptidase family M48 JCR16_RS06930 PF09424 Yqey-like protein JCR16_RS06935 PF01165 Ribosomal protein S21 JCR16_RS06940 PF00814 Glycoprotease family JCR16_RS06960 PF00069 Protein kinase domain JCR16_RS06985 PF03466 LysR substrate binding domain JCR16_RS06985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR16_RS06990 PF00202 Aminotransferase class-III JCR16_RS06995 PF00171 Aldehyde dehydrogenase family JCR16_RS07000 PF00324 Amino acid permease JCR16_RS07030 PF04076 Bacterial OB fold (BOF) protein JCR16_RS07055 PF00561 alpha/beta hydrolase fold JCR16_RS07060 PF03616 Sodium/glutamate symporter JCR16_RS07070 PF00392 Bacterial regulatory proteins, gntR family JCR16_RS07070 PF07729 FCD domain JCR16_RS07120 PF00083 Sugar (and other) transporter JCR16_RS07120 PF08946 Osmosensory transporter coiled coil JCR16_RS07140 PF00155 Aminotransferase class I and II JCR16_RS07145 PF02080 TrkA-C domain JCR16_RS07145 PF06826 Predicted Permease Membrane Region JCR16_RS07155 PF04403 Paraquat-inducible protein A JCR16_RS07160 PF02470 MlaD protein JCR16_RS07170 PF01177 Asp/Glu/Hydantoin racemase JCR16_RS07180 PF07995 Glucose / Sorbosone dehydrogenase JCR16_RS07190 PF13610 DDE domain JCR16_RS07205 PF00132 Bacterial transferase hexapeptide (six repeats) JCR16_RS07210 PF01909 Nucleotidyltransferase domain JCR16_RS07210 PF13427 Domain of unknown function (DUF4111) JCR16_RS07215 PF00893 Small Multidrug Resistance protein JCR16_RS07220 PF00809 Pterin binding enzyme JCR16_RS07235 PF07091 Ribosomal RNA methyltransferase (FmrO) JCR16_RS07255 PF12848 ABC transporter JCR16_RS07255 PF00005 ABC transporter JCR16_RS07260 PF01636 Phosphotransferase enzyme family JCR16_RS07270 PF13817 IS66 C-terminal element JCR16_RS07270 PF13005 zinc-finger binding domain of transposase IS66 JCR16_RS07270 PF13007 Transposase C of IS166 homeodomain JCR16_RS07270 PF03050 Transposase IS66 family JCR16_RS07275 PF13610 DDE domain JCR16_RS07285 PF13610 DDE domain JCR16_RS07300 PF13610 DDE domain JCR16_RS07315 PF00753 Metallo-beta-lactamase superfamily JCR16_RS07315 PF16123 Hydroxyacylglutathione hydrolase C-terminus JCR16_RS07320 PF00528 Binding-protein-dependent transport system inner membrane component JCR16_RS07325 PF09383 NIL domain JCR16_RS07325 PF00005 ABC transporter JCR16_RS07330 PF03180 NLPA lipoprotein JCR16_RS07335 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JCR16_RS07335 PF02843 Phosphoribosylglycinamide synthetase, C domain JCR16_RS07335 PF02844 Phosphoribosylglycinamide synthetase, N domain JCR16_RS07340 PF02142 MGS-like domain JCR16_RS07340 PF01808 AICARFT/IMPCHase bienzyme JCR16_RS07345 PF02954 Bacterial regulatory protein, Fis family JCR16_RS07365 PF01134 Glucose inhibited division protein A JCR16_RS07365 PF13932 GidA associated domain JCR16_RS07375 PF14403 Circularly permuted ATP-grasp type 2 JCR16_RS07385 PF08379 Bacterial transglutaminase-like N-terminal region JCR16_RS07385 PF01841 Transglutaminase-like superfamily JCR16_RS07395 PF00842 Alanine racemase, C-terminal domain JCR16_RS07395 PF01168 Alanine racemase, N-terminal domain JCR16_RS07400 PF00772 DnaB-like helicase N terminal domain JCR16_RS07400 PF03796 DnaB-like helicase C terminal domain JCR16_RS07405 PF01281 Ribosomal protein L9, N-terminal domain JCR16_RS07405 PF03948 Ribosomal protein L9, C-terminal domain JCR16_RS07410 PF01084 Ribosomal protein S18 JCR16_RS07415 PF01250 Ribosomal protein S6 JCR16_RS07420 PF01040 UbiA prenyltransferase family JCR16_RS07425 PF03626 Prokaryotic Cytochrome C oxidase subunit IV JCR16_RS07430 PF00510 Cytochrome c oxidase subunit III JCR16_RS07435 PF00115 Cytochrome C and Quinol oxidase polypeptide I JCR16_RS07440 PF06481 COX Aromatic Rich Motif JCR16_RS07440 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JCR16_RS07450 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JCR16_RS07450 PF00391 PEP-utilising enzyme, mobile domain JCR16_RS07450 PF02896 PEP-utilising enzyme, TIM barrel domain JCR16_RS07455 PF03618 Kinase/pyrophosphorylase JCR16_RS07465 PF01522 Polysaccharide deacetylase JCR16_RS07465 PF14883 Hypothetical glycosyl hydrolase family 13 JCR16_RS07470 PF00535 Glycosyl transferase family 2 JCR16_RS07485 PF00296 Luciferase-like monooxygenase JCR16_RS07500 PF03466 LysR substrate binding domain JCR16_RS07500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR16_RS07510 PF03462 PCRF domain JCR16_RS07510 PF00472 RF-1 domain JCR16_RS07515 PF13847 Methyltransferase domain JCR16_RS07515 PF17827 PrmC N-terminal domain JCR16_RS07520 PF00528 Binding-protein-dependent transport system inner membrane component JCR16_RS07525 PF09084 NMT1/THI5 like JCR16_RS07530 PF12833 Helix-turn-helix domain JCR16_RS07535 PF00106 short chain dehydrogenase JCR16_RS07540 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR16_RS07540 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR16_RS07540 PF02770 Acyl-CoA dehydrogenase, middle domain JCR16_RS07545 PF00501 AMP-binding enzyme JCR16_RS07545 PF13193 AMP-binding enzyme C-terminal domain JCR16_RS07550 PF01613 Flavin reductase like domain JCR16_RS07555 PF00899 ThiF family JCR16_RS07560 PF03109 ABC1 family JCR16_RS07575 PF03814 Potassium-transporting ATPase A subunit JCR16_RS07585 PF02669 K+-transporting ATPase, c chain JCR16_RS07590 PF02702 Osmosensitive K+ channel His kinase sensor domain JCR16_RS07590 PF00512 His Kinase A (phospho-acceptor) domain JCR16_RS07590 PF13493 Domain of unknown function (DUF4118) JCR16_RS07590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR16_RS07595 PF00486 Transcriptional regulatory protein, C terminal JCR16_RS07595 PF00072 Response regulator receiver domain JCR16_RS07600 PF00120 Glutamine synthetase, catalytic domain JCR16_RS07610 PF03232 Ubiquinone biosynthesis protein COQ7 JCR16_RS07620 PF01103 Surface antigen JCR16_RS07620 PF17243 POTRA domain TamA domain 1 JCR16_RS07620 PF07244 Surface antigen variable number repeat JCR16_RS07635 PF06434 Aconitate hydratase 2 N-terminus JCR16_RS07635 PF11791 Aconitate B N-terminal domain JCR16_RS07635 PF00330 Aconitase family (aconitate hydratase) JCR16_RS07645 PF00027 Cyclic nucleotide-binding domain JCR16_RS07645 PF00520 Ion transport protein JCR16_RS07650 PF07690 Major Facilitator Superfamily JCR16_RS07665 PF03466 LysR substrate binding domain JCR16_RS07665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR16_RS07670 PF04284 Protein of unknown function (DUF441) JCR16_RS07680 PF00849 RNA pseudouridylate synthase JCR16_RS07680 PF01479 S4 domain JCR16_RS07695 PF01479 S4 domain JCR16_RS07695 PF00849 RNA pseudouridylate synthase JCR16_RS07700 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE JCR16_RS07705 PF08676 MutL C terminal dimerisation domain JCR16_RS07705 PF01119 DNA mismatch repair protein, C-terminal domain JCR16_RS07715 PF17209 Hfq protein JCR16_RS07725 PF00881 Nitroreductase family JCR16_RS07735 PF00149 Calcineurin-like phosphoesterase JCR16_RS07740 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JCR16_RS07745 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain JCR16_RS07745 PF00749 tRNA synthetases class I (E and Q), catalytic domain JCR16_RS07750 PF00958 GMP synthase C terminal domain JCR16_RS07750 PF00117 Glutamine amidotransferase class-I JCR16_RS07750 PF02540 NAD synthase JCR16_RS07755 PF05985 Ethanolamine ammonia-lyase light chain (EutC) JCR16_RS07760 PF06751 Ethanolamine ammonia lyase large subunit (EutB) JCR16_RS07765 PF13520 Amino acid permease JCR16_RS07770 PF00171 Aldehyde dehydrogenase family JCR16_RS07785 PF00465 Iron-containing alcohol dehydrogenase JCR16_RS07790 PF05970 PIF1-like helicase JCR16_RS07790 PF14493 Helix-turn-helix domain JCR16_RS07800 PF06445 GyrI-like small molecule binding domain JCR16_RS07805 PF02110 Hydroxyethylthiazole kinase family JCR16_RS07820 PF11940 Domain of unknown function (DUF3458) Ig-like fold JCR16_RS07820 PF01433 Peptidase family M1 domain JCR16_RS07820 PF17432 Domain of unknown function (DUF3458_C) ARM repeats JCR16_RS07830 PF00106 short chain dehydrogenase JCR16_RS07840 PF01817 Chorismate mutase type II JCR16_RS07845 PF01037 Lrp/AsnC ligand binding domain JCR16_RS07855 PF00440 Bacterial regulatory proteins, tetR family JCR16_RS07860 PF00593 TonB dependent receptor JCR16_RS07860 PF07715 TonB-dependent Receptor Plug Domain JCR16_RS07865 PF00924 Mechanosensitive ion channel JCR16_RS07900 PF00593 TonB dependent receptor JCR16_RS07900 PF07715 TonB-dependent Receptor Plug Domain JCR16_RS07920 PF12848 ABC transporter JCR16_RS07920 PF00005 ABC transporter JCR16_RS07925 PF00582 Universal stress protein family JCR16_RS07950 PF00689 Cation transporting ATPase, C-terminus JCR16_RS07950 PF00690 Cation transporter/ATPase, N-terminus JCR16_RS07955 PF02308 MgtC family JCR16_RS07960 PF03594 Benzoate membrane transport protein JCR16_RS07965 PF01037 Lrp/AsnC ligand binding domain JCR16_RS07970 PF01810 LysE type translocator JCR16_RS07975 PF00923 Transaldolase/Fructose-6-phosphate aldolase JCR16_RS07980 PF03466 LysR substrate binding domain JCR16_RS07980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR16_RS07990 PF00108 Thiolase, N-terminal domain JCR16_RS07990 PF02803 Thiolase, C-terminal domain JCR16_RS08000 PF01575 MaoC like domain JCR16_RS08005 PF00144 Beta-lactamase JCR16_RS08015 PF07690 Major Facilitator Superfamily JCR16_RS08020 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding JCR16_RS08020 PF12170 DNA polymerase III tau subunit V interacting with alpha JCR16_RS08020 PF12169 DNA polymerase III subunits gamma and tau domain III JCR16_RS08025 PF05506 Domain of unknown function (DUF756) JCR16_RS08025 PF04185 Phosphoesterase family JCR16_RS08030 PF03061 Thioesterase superfamily JCR16_RS08035 PF00465 Iron-containing alcohol dehydrogenase JCR16_RS08045 PF01451 Low molecular weight phosphotyrosine protein phosphatase JCR16_RS08050 PF01565 FAD binding domain JCR16_RS08050 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JCR16_RS08065 PF01645 Conserved region in glutamate synthase JCR16_RS08085 PF12832 MFS_1 like family JCR16_RS08095 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JCR16_RS08095 PF02785 Biotin carboxylase C-terminal domain JCR16_RS08095 PF00289 Biotin carboxylase, N-terminal domain JCR16_RS08100 PF00364 Biotin-requiring enzyme JCR16_RS08105 PF01220 Dehydroquinase class II JCR16_RS08110 PF11799 impB/mucB/samB family C-terminal domain JCR16_RS08110 PF00817 impB/mucB/samB family JCR16_RS08110 PF13438 Domain of unknown function (DUF4113) JCR16_RS08120 PF00005 ABC transporter JCR16_RS08125 PF00072 Response regulator receiver domain JCR16_RS08125 PF00486 Transcriptional regulatory protein, C terminal JCR16_RS08135 PF04324 BFD-like [2Fe-2S] binding domain JCR16_RS08135 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JCR16_RS08135 PF18267 Rubredoxin NAD+ reductase C-terminal domain JCR16_RS08135 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR16_RS08135 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JCR16_RS08135 PF13806 Rieske-like [2Fe-2S] domain JCR16_RS08140 PF18267 Rubredoxin NAD+ reductase C-terminal domain JCR16_RS08140 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR16_RS08140 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JCR16_RS08140 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JCR16_RS08140 PF04324 BFD-like [2Fe-2S] binding domain JCR16_RS08145 PF04324 BFD-like [2Fe-2S] binding domain JCR16_RS08145 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JCR16_RS08145 PF00384 Molybdopterin oxidoreductase JCR16_RS08145 PF01568 Molydopterin dinucleotide binding domain JCR16_RS08150 PF12804 MobA-like NTP transferase domain JCR16_RS08155 PF00384 Molybdopterin oxidoreductase JCR16_RS08155 PF01568 Molydopterin dinucleotide binding domain JCR16_RS08155 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JCR16_RS08160 PF06463 Molybdenum Cofactor Synthesis C JCR16_RS08160 PF04055 Radical SAM superfamily JCR16_RS08170 PF02391 MoaE protein JCR16_RS08175 PF00994 Probable molybdopterin binding domain JCR16_RS08175 PF01967 MoaC family JCR16_RS08180 PF03454 MoeA C-terminal region (domain IV) JCR16_RS08180 PF03453 MoeA N-terminal region (domain I and II) JCR16_RS08180 PF00994 Probable molybdopterin binding domain JCR16_RS08185 PF01638 HxlR-like helix-turn-helix JCR16_RS08190 PF00155 Aminotransferase class I and II JCR16_RS08190 PF00392 Bacterial regulatory proteins, gntR family JCR16_RS08195 PF00892 EamA-like transporter family JCR16_RS08215 PF02635 DsrE/DsrF-like family JCR16_RS08220 PF16363 GDP-mannose 4,6 dehydratase JCR16_RS08225 PF00206 Lyase JCR16_RS08225 PF10415 Fumarase C C-terminus JCR16_RS08245 PF01266 FAD dependent oxidoreductase JCR16_RS08255 PF02542 YgbB family JCR16_RS08265 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JCR16_RS08265 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JCR16_RS08270 PF00440 Bacterial regulatory proteins, tetR family JCR16_RS08275 PF00072 Response regulator receiver domain JCR16_RS08275 PF00158 Sigma-54 interaction domain JCR16_RS08275 PF02954 Bacterial regulatory protein, Fis family JCR16_RS08280 PF00989 PAS fold JCR16_RS08280 PF00512 His Kinase A (phospho-acceptor) domain JCR16_RS08280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR16_RS08285 PF00919 Uncharacterized protein family UPF0004 JCR16_RS08285 PF04055 Radical SAM superfamily JCR16_RS08285 PF18693 TRAM domain JCR16_RS08290 PF00696 Amino acid kinase family JCR16_RS08295 PF01765 Ribosome recycling factor JCR16_RS08300 PF01255 Putative undecaprenyl diphosphate synthase JCR16_RS08310 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase JCR16_RS08310 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain JCR16_RS08310 PF13288 DXP reductoisomerase C-terminal domain JCR16_RS08315 PF13180 PDZ domain JCR16_RS08315 PF17820 PDZ domain JCR16_RS08315 PF02163 Peptidase family M50 JCR16_RS08320 PF01103 Surface antigen JCR16_RS08320 PF07244 Surface antigen variable number repeat JCR16_RS08330 PF00132 Bacterial transferase hexapeptide (six repeats) JCR16_RS08330 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD JCR16_RS08335 PF07977 FabA-like domain JCR16_RS08340 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 JCR16_RS08340 PF00132 Bacterial transferase hexapeptide (six repeats) JCR16_RS08355 PF02631 RecX family JCR16_RS08360 PF00154 recA bacterial DNA recombination protein JCR16_RS08365 PF01479 S4 domain JCR16_RS08370 PF13419 Haloacid dehalogenase-like hydrolase JCR16_RS08395 PF01037 Lrp/AsnC ligand binding domain JCR16_RS08400 PF00266 Aminotransferase class-V JCR16_RS08405 PF00324 Amino acid permease JCR16_RS08415 PF05922 Peptidase inhibitor I9 JCR16_RS08415 PF00082 Subtilase family JCR16_RS08420 PF00916 Sulfate permease family JCR16_RS08420 PF01740 STAS domain JCR16_RS08425 PF02586 SOS response associated peptidase (SRAP) JCR16_RS08430 PF07995 Glucose / Sorbosone dehydrogenase JCR16_RS08440 PF00563 EAL domain JCR16_RS08440 PF00990 Diguanylate cyclase, GGDEF domain JCR16_RS08440 PF03707 Bacterial signalling protein N terminal repeat JCR16_RS08460 PF02378 Phosphotransferase system, EIIC JCR16_RS08460 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JCR16_RS08465 PF00294 pfkB family carbohydrate kinase JCR16_RS08470 PF00391 PEP-utilising enzyme, mobile domain JCR16_RS08470 PF00381 PTS HPr component phosphorylation site JCR16_RS08470 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JCR16_RS08470 PF05524 PEP-utilising enzyme, N-terminal JCR16_RS08470 PF02896 PEP-utilising enzyme, TIM barrel domain JCR16_RS08495 PF05525 Branched-chain amino acid transport protein JCR16_RS08500 PF00557 Metallopeptidase family M24 JCR16_RS08505 PF03466 LysR substrate binding domain JCR16_RS08505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR16_RS08515 PF00462 Glutaredoxin JCR16_RS08520 PF00202 Aminotransferase class-III JCR16_RS08525 PF00478 IMP dehydrogenase / GMP reductase domain JCR16_RS08525 PF00571 CBS domain JCR16_RS08550 PF02881 SRP54-type protein, helical bundle domain JCR16_RS08550 PF00448 SRP54-type protein, GTPase domain JCR16_RS08560 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) JCR16_RS08575 PF08173 Membrane bound YbgT-like protein JCR16_RS08580 PF02322 Cytochrome bd terminal oxidase subunit II JCR16_RS08585 PF01654 Cytochrome bd terminal oxidase subunit I JCR16_RS08595 PF13737 Transposase DDE domain JCR16_RS08600 PF07290 Protein of unknown function (DUF1449) JCR16_RS08610 PF00294 pfkB family carbohydrate kinase JCR16_RS08615 PF07715 TonB-dependent Receptor Plug Domain JCR16_RS08615 PF00593 TonB dependent receptor JCR16_RS08620 PF00675 Insulinase (Peptidase family M16) JCR16_RS08620 PF05193 Peptidase M16 inactive domain JCR16_RS08620 PF08367 Peptidase M16C associated JCR16_RS08625 PF02253 Phospholipase A1 JCR16_RS08630 PF02386 Cation transport protein JCR16_RS08635 PF02080 TrkA-C domain JCR16_RS08635 PF02254 TrkA-N domain JCR16_RS08640 PF00585 C-terminal regulatory domain of Threonine dehydratase JCR16_RS08640 PF00291 Pyridoxal-phosphate dependent enzyme JCR16_RS08645 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) JCR16_RS08660 PF01118 Semialdehyde dehydrogenase, NAD binding domain JCR16_RS08660 PF02774 Semialdehyde dehydrogenase, dimerisation domain JCR16_RS08670 PF02617 ATP-dependent Clp protease adaptor protein ClpS JCR16_RS08675 PF17871 AAA lid domain JCR16_RS08675 PF00004 ATPase family associated with various cellular activities (AAA) JCR16_RS08675 PF07724 AAA domain (Cdc48 subfamily) JCR16_RS08675 PF10431 C-terminal, D2-small domain, of ClpB protein JCR16_RS08675 PF02861 Clp amino terminal domain, pathogenicity island component JCR16_RS08680 PF02694 Uncharacterised BCR, YnfA/UPF0060 family JCR16_RS08685 PF00793 DAHP synthetase I family JCR16_RS08700 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JCR16_RS08700 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR16_RS08730 PF00117 Glutamine amidotransferase class-I JCR16_RS08730 PF06418 CTP synthase N-terminus JCR16_RS08735 PF00793 DAHP synthetase I family JCR16_RS08740 PF00113 Enolase, C-terminal TIM barrel domain JCR16_RS08740 PF03952 Enolase, N-terminal domain JCR16_RS08745 PF04239 Protein of unknown function (DUF421) JCR16_RS08750 PF04977 Septum formation initiator JCR16_RS08755 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JCR16_RS08760 PF01144 Coenzyme A transferase JCR16_RS08765 PF01144 Coenzyme A transferase JCR16_RS08770 PF02803 Thiolase, C-terminal domain JCR16_RS08770 PF00108 Thiolase, N-terminal domain JCR16_RS08775 PF10397 Adenylosuccinate lyase C-terminus JCR16_RS08775 PF00206 Lyase JCR16_RS08780 PF00561 alpha/beta hydrolase fold JCR16_RS08785 PF07690 Major Facilitator Superfamily JCR16_RS08790 PF02627 Carboxymuconolactone decarboxylase family JCR16_RS08795 PF00775 Dioxygenase JCR16_RS08795 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal JCR16_RS08800 PF00775 Dioxygenase JCR16_RS08805 PF01487 Type I 3-dehydroquinase JCR16_RS08810 PF05048 Periplasmic copper-binding protein (NosD) JCR16_RS08815 PF04966 Carbohydrate-selective porin, OprB family JCR16_RS08820 PF01011 PQQ enzyme repeat JCR16_RS08820 PF13360 PQQ-like domain JCR16_RS08830 PF04143 Sulphur transport JCR16_RS08840 PF00753 Metallo-beta-lactamase superfamily JCR16_RS08845 PF01614 Bacterial transcriptional regulator JCR16_RS08845 PF09339 IclR helix-turn-helix domain JCR16_RS08850 PF03466 LysR substrate binding domain JCR16_RS08850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR16_RS08855 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR16_RS08855 PF02770 Acyl-CoA dehydrogenase, middle domain JCR16_RS08855 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR16_RS08870 PF00106 short chain dehydrogenase JCR16_RS08880 PF07690 Major Facilitator Superfamily JCR16_RS08890 PF01425 Amidase JCR16_RS08895 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JCR16_RS08910 PF00355 Rieske [2Fe-2S] domain JCR16_RS08910 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JCR16_RS08925 PF00175 Oxidoreductase NAD-binding domain JCR16_RS08925 PF00111 2Fe-2S iron-sulfur cluster binding domain JCR16_RS08930 PF01613 Flavin reductase like domain JCR16_RS08935 PF02311 AraC-like ligand binding domain JCR16_RS08935 PF12833 Helix-turn-helix domain JCR16_RS08940 PF01179 Copper amine oxidase, enzyme domain JCR16_RS08940 PF02727 Copper amine oxidase, N2 domain JCR16_RS08940 PF07833 Copper amine oxidase N-terminal domain JCR16_RS08940 PF02728 Copper amine oxidase, N3 domain JCR16_RS08950 PF00171 Aldehyde dehydrogenase family JCR16_RS08955 PF01804 Penicillin amidase JCR16_RS08960 PF12146 Serine aminopeptidase, S33 JCR16_RS08965 PF00108 Thiolase, N-terminal domain JCR16_RS08965 PF02803 Thiolase, C-terminal domain JCR16_RS08970 PF01144 Coenzyme A transferase JCR16_RS08975 PF01144 Coenzyme A transferase JCR16_RS08980 PF04444 Catechol dioxygenase N terminus JCR16_RS08980 PF00775 Dioxygenase JCR16_RS08985 PF02426 Muconolactone delta-isomerase JCR16_RS08990 PF13378 Enolase C-terminal domain-like JCR16_RS08990 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JCR16_RS08995 PF03466 LysR substrate binding domain JCR16_RS08995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR16_RS09005 PF07729 FCD domain JCR16_RS09005 PF00392 Bacterial regulatory proteins, gntR family JCR16_RS09010 PF00920 Dehydratase family JCR16_RS09015 PF07690 Major Facilitator Superfamily JCR16_RS09025 PF00171 Aldehyde dehydrogenase family JCR16_RS09045 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR16_RS09045 PF02770 Acyl-CoA dehydrogenase, middle domain JCR16_RS09045 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR16_RS09055 PF06506 Propionate catabolism activator JCR16_RS09055 PF02954 Bacterial regulatory protein, Fis family JCR16_RS09055 PF00158 Sigma-54 interaction domain JCR16_RS09060 PF00501 AMP-binding enzyme JCR16_RS09060 PF13193 AMP-binding enzyme C-terminal domain JCR16_RS09065 PF04341 Protein of unknown function, DUF485 JCR16_RS09070 PF00474 Sodium:solute symporter family JCR16_RS09075 PF00107 Zinc-binding dehydrogenase JCR16_RS09075 PF08240 Alcohol dehydrogenase GroES-like domain JCR16_RS09080 PF00171 Aldehyde dehydrogenase family JCR16_RS09090 PF00561 alpha/beta hydrolase fold JCR16_RS09095 PF06628 Catalase-related immune-responsive JCR16_RS09095 PF00199 Catalase JCR16_RS09110 PF07859 alpha/beta hydrolase fold JCR16_RS09115 PF01047 MarR family JCR16_RS09120 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JCR16_RS09120 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR16_RS09125 PF00106 short chain dehydrogenase JCR16_RS09130 PF01872 RibD C-terminal domain JCR16_RS09135 PF09278 MerR, DNA binding JCR16_RS09135 PF00376 MerR family regulatory protein JCR16_RS09145 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR16_RS09155 PF12706 Beta-lactamase superfamily domain JCR16_RS09160 PF08359 YsiA-like protein, C-terminal region JCR16_RS09160 PF00440 Bacterial regulatory proteins, tetR family JCR16_RS09170 PF00857 Isochorismatase family JCR16_RS09175 PF03466 LysR substrate binding domain JCR16_RS09175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR16_RS09180 PF07995 Glucose / Sorbosone dehydrogenase JCR16_RS09185 PF00999 Sodium/hydrogen exchanger family JCR16_RS09185 PF02254 TrkA-N domain JCR16_RS09195 PF07687 Peptidase dimerisation domain JCR16_RS09195 PF01546 Peptidase family M20/M25/M40 JCR16_RS09205 PF08479 POTRA domain, ShlB-type JCR16_RS09205 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB JCR16_RS09205 PF17287 POTRA domain JCR16_RS09210 PF04829 Pre-toxin domain with VENN motif JCR16_RS09210 PF13018 Extended Signal Peptide of Type V secretion system JCR16_RS09210 PF13332 Hemagglutinin repeat JCR16_RS09210 PF05860 haemagglutination activity domain JCR16_RS09225 PF07690 Major Facilitator Superfamily JCR16_RS09230 PF04909 Amidohydrolase JCR16_RS09240 PF00392 Bacterial regulatory proteins, gntR family JCR16_RS09240 PF07702 UTRA domain JCR16_RS09245 PF08450 SMP-30/Gluconolactonase/LRE-like region JCR16_RS09255 PF03466 LysR substrate binding domain JCR16_RS09255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR16_RS09275 PF07690 Major Facilitator Superfamily JCR16_RS09280 PF01842 ACT domain JCR16_RS09280 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JCR16_RS09280 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JCR16_RS09285 PF03737 Aldolase/RraA JCR16_RS09305 PF00529 HlyD membrane-fusion protein of T1SS JCR16_RS09305 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JCR16_RS09320 PF00171 Aldehyde dehydrogenase family JCR16_RS09325 PF00920 Dehydratase family JCR16_RS09335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR16_RS09335 PF03466 LysR substrate binding domain JCR16_RS09340 PF01370 NAD dependent epimerase/dehydratase family JCR16_RS09345 PF07690 Major Facilitator Superfamily JCR16_RS09350 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JCR16_RS09350 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JCR16_RS09355 PF06719 AraC-type transcriptional regulator N-terminus JCR16_RS09355 PF12833 Helix-turn-helix domain JCR16_RS09370 PF08240 Alcohol dehydrogenase GroES-like domain JCR16_RS09370 PF00107 Zinc-binding dehydrogenase JCR16_RS09380 PF01032 FecCD transport family JCR16_RS09385 PF00005 ABC transporter JCR16_RS09405 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JCR16_RS09405 PF14572 Phosphoribosyl synthetase-associated domain JCR16_RS09410 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family JCR16_RS09480 PF00196 Bacterial regulatory proteins, luxR family JCR16_RS09485 PF01425 Amidase JCR16_RS09490 PF13533 Biotin-lipoyl like JCR16_RS09495 PF07690 Major Facilitator Superfamily JCR16_RS09520 PF01975 Survival protein SurE JCR16_RS09525 PF13737 Transposase DDE domain JCR16_RS09535 PF04607 Region found in RelA / SpoT proteins JCR16_RS09535 PF13291 ACT domain JCR16_RS09535 PF02824 TGS domain JCR16_RS09585 PF12146 Serine aminopeptidase, S33 JCR16_RS09590 PF12833 Helix-turn-helix domain JCR16_RS09590 PF02311 AraC-like ligand binding domain JCR16_RS09600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR16_RS09600 PF00512 His Kinase A (phospho-acceptor) domain JCR16_RS09600 PF00672 HAMP domain JCR16_RS09600 PF16527 Two-component sensor protein CpxA, periplasmic domain JCR16_RS09605 PF00486 Transcriptional regulatory protein, C terminal JCR16_RS09605 PF00072 Response regulator receiver domain JCR16_RS09610 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JCR16_RS09610 PF00529 HlyD membrane-fusion protein of T1SS JCR16_RS09615 PF00873 AcrB/AcrD/AcrF family JCR16_RS09620 PF02321 Outer membrane efflux protein JCR16_RS09625 PF12146 Serine aminopeptidase, S33 JCR16_RS09630 PF00743 Flavin-binding monooxygenase-like JCR16_RS09635 PF01593 Flavin containing amine oxidoreductase JCR16_RS09650 PF01266 FAD dependent oxidoreductase JCR16_RS09670 PF16970 Type-1 fimbrial protein, A JCR16_RS09680 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JCR16_RS09680 PF02753 Pili assembly chaperone PapD, C-terminal domain JCR16_RS09685 PF13954 PapC N-terminal domain JCR16_RS09685 PF13953 PapC C-terminal domain JCR16_RS09685 PF00577 Outer membrane usher protein JCR16_RS09690 PF00419 Fimbrial protein JCR16_RS09700 PF08240 Alcohol dehydrogenase GroES-like domain JCR16_RS09700 PF00107 Zinc-binding dehydrogenase JCR16_RS09710 PF00199 Catalase JCR16_RS09725 PF13091 PLD-like domain JCR16_RS09740 PF01244 Membrane dipeptidase (Peptidase family M19) JCR16_RS09745 PF13186 Iron-sulfur cluster-binding domain JCR16_RS09745 PF04055 Radical SAM superfamily JCR16_RS09750 PF05402 Coenzyme PQQ synthesis protein D (PqqD) JCR16_RS09755 PF03070 TENA/THI-4/PQQC family JCR16_RS09760 PF12706 Beta-lactamase superfamily domain JCR16_RS09765 PF08042 PqqA family JCR16_RS09770 PF02503 Polyphosphate kinase middle domain JCR16_RS09770 PF13090 Polyphosphate kinase C-terminal domain 2 JCR16_RS09770 PF17941 Polyphosphate kinase C-terminal domain 1 JCR16_RS09770 PF13089 Polyphosphate kinase N-terminal domain JCR16_RS09775 PF00149 Calcineurin-like phosphoesterase JCR16_RS09785 PF00857 Isochorismatase family JCR16_RS09785 PF00550 Phosphopantetheine attachment site JCR16_RS09790 PF00106 short chain dehydrogenase JCR16_RS09795 PF03459 TOBE domain JCR16_RS09795 PF00005 ABC transporter JCR16_RS09800 PF00528 Binding-protein-dependent transport system inner membrane component JCR16_RS09810 PF03459 TOBE domain JCR16_RS09810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR16_RS09815 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JCR16_RS09815 PF00355 Rieske [2Fe-2S] domain JCR16_RS09820 PF00866 Ring hydroxylating beta subunit JCR16_RS09825 PF00970 Oxidoreductase FAD-binding domain JCR16_RS09825 PF00111 2Fe-2S iron-sulfur cluster binding domain JCR16_RS09825 PF00175 Oxidoreductase NAD-binding domain JCR16_RS09830 PF12833 Helix-turn-helix domain JCR16_RS09830 PF14525 AraC-binding-like domain JCR16_RS09840 PF01613 Flavin reductase like domain JCR16_RS09855 PF01738 Dienelactone hydrolase family JCR16_RS09860 PF07690 Major Facilitator Superfamily JCR16_RS09865 PF06719 AraC-type transcriptional regulator N-terminus JCR16_RS09865 PF12833 Helix-turn-helix domain JCR16_RS09890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR16_RS09890 PF03466 LysR substrate binding domain JCR16_RS09895 PF01144 Coenzyme A transferase JCR16_RS09900 PF01144 Coenzyme A transferase JCR16_RS09905 PF02667 Short chain fatty acid transporter JCR16_RS09910 PF02803 Thiolase, C-terminal domain JCR16_RS09910 PF00108 Thiolase, N-terminal domain JCR16_RS09915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR16_RS09915 PF03466 LysR substrate binding domain JCR16_RS09920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR16_RS09920 PF03466 LysR substrate binding domain JCR16_RS09935 PF00206 Lyase JCR16_RS09935 PF10415 Fumarase C C-terminus JCR16_RS09940 PF07715 TonB-dependent Receptor Plug Domain JCR16_RS09940 PF00593 TonB dependent receptor JCR16_RS09945 PF00083 Sugar (and other) transporter JCR16_RS09960 PF00005 ABC transporter JCR16_RS09965 PF00528 Binding-protein-dependent transport system inner membrane component JCR16_RS09970 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JCR16_RS09985 PF00392 Bacterial regulatory proteins, gntR family JCR16_RS09985 PF07702 UTRA domain JCR16_RS09995 PF02525 Flavodoxin-like fold JCR16_RS10000 PF01638 HxlR-like helix-turn-helix JCR16_RS10005 PF06445 GyrI-like small molecule binding domain JCR16_RS10005 PF12833 Helix-turn-helix domain JCR16_RS10020 PF01925 Sulfite exporter TauE/SafE JCR16_RS10025 PF04273 Putative phosphatase (DUF442) JCR16_RS10025 PF00753 Metallo-beta-lactamase superfamily JCR16_RS10030 PF04273 Putative phosphatase (DUF442) JCR16_RS10030 PF00753 Metallo-beta-lactamase superfamily JCR16_RS10035 PF02954 Bacterial regulatory protein, Fis family JCR16_RS10035 PF00072 Response regulator receiver domain JCR16_RS10035 PF00158 Sigma-54 interaction domain JCR16_RS10040 PF01062 Bestrophin, RFP-TM, chloride channel JCR16_RS10045 PF00107 Zinc-binding dehydrogenase JCR16_RS10045 PF08240 Alcohol dehydrogenase GroES-like domain JCR16_RS10050 PF00106 short chain dehydrogenase JCR16_RS10055 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCR16_RS10055 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR16_RS10060 PF02817 e3 binding domain JCR16_RS10060 PF00364 Biotin-requiring enzyme JCR16_RS10060 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JCR16_RS10065 PF02779 Transketolase, pyrimidine binding domain JCR16_RS10065 PF02780 Transketolase, C-terminal domain JCR16_RS10070 PF00676 Dehydrogenase E1 component JCR16_RS10075 PF04055 Radical SAM superfamily JCR16_RS10090 PF00990 Diguanylate cyclase, GGDEF domain JCR16_RS10090 PF08448 PAS fold JCR16_RS10095 PF01264 Chorismate synthase JCR16_RS10100 PF05175 Methyltransferase small domain JCR16_RS10105 PF00291 Pyridoxal-phosphate dependent enzyme JCR16_RS10115 PF00004 ATPase family associated with various cellular activities (AAA) JCR16_RS10115 PF17862 AAA+ lid domain JCR16_RS10115 PF01434 Peptidase family M41 JCR16_RS10125 PF05166 YcgL domain JCR16_RS10145 PF01612 3'-5' exonuclease JCR16_RS10145 PF00570 HRDC domain JCR16_RS10150 PF13662 Toprim domain JCR16_RS10150 PF02132 RecR protein JCR16_RS10155 PF02575 YbaB/EbfC DNA-binding family JCR16_RS10165 PF01053 Cys/Met metabolism PLP-dependent enzyme JCR16_RS10170 PF00561 alpha/beta hydrolase fold JCR16_RS10175 PF08241 Methyltransferase domain JCR16_RS10205 PF01230 HIT domain JCR16_RS10240 PF00005 ABC transporter JCR16_RS10245 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JCR16_RS10255 PF02684 Lipid-A-disaccharide synthetase JCR16_RS10260 PF07715 TonB-dependent Receptor Plug Domain JCR16_RS10260 PF00593 TonB dependent receptor JCR16_RS10280 PF01925 Sulfite exporter TauE/SafE JCR16_RS10285 PF00793 DAHP synthetase I family JCR16_RS10290 PF02654 Cobalamin-5-phosphate synthase JCR16_RS10305 PF02277 Phosphoribosyltransferase JCR16_RS10310 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase JCR16_RS10320 PF13419 Haloacid dehalogenase-like hydrolase JCR16_RS10345 PF07715 TonB-dependent Receptor Plug Domain JCR16_RS10345 PF00593 TonB dependent receptor JCR16_RS10360 PF06276 Ferric iron reductase FhuF-like transporter JCR16_RS10360 PF04183 IucA / IucC family JCR16_RS10365 PF06276 Ferric iron reductase FhuF-like transporter JCR16_RS10365 PF04183 IucA / IucC family JCR16_RS10370 PF07690 Major Facilitator Superfamily JCR16_RS10375 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) JCR16_RS10380 PF06276 Ferric iron reductase FhuF-like transporter JCR16_RS10380 PF04183 IucA / IucC family JCR16_RS10385 PF04073 Aminoacyl-tRNA editing domain JCR16_RS10395 PF03109 ABC1 family JCR16_RS10400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR16_RS10400 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR16_RS10400 PF02770 Acyl-CoA dehydrogenase, middle domain JCR16_RS10405 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR16_RS10405 PF02770 Acyl-CoA dehydrogenase, middle domain JCR16_RS10405 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR16_RS10410 PF00487 Fatty acid desaturase JCR16_RS10415 PF12833 Helix-turn-helix domain JCR16_RS10415 PF12852 Cupin JCR16_RS10420 PF09312 SurA N-terminal domain JCR16_RS10420 PF00639 PPIC-type PPIASE domain JCR16_RS10425 PF00216 Bacterial DNA-binding protein JCR16_RS10440 PF02082 Transcriptional regulator JCR16_RS10445 PF00266 Aminotransferase class-V JCR16_RS10450 PF01592 NifU-like N terminal domain JCR16_RS10455 PF01521 Iron-sulphur cluster biosynthesis JCR16_RS10460 PF07743 HSCB C-terminal oligomerisation domain JCR16_RS10460 PF00226 DnaJ domain JCR16_RS10465 PF00012 Hsp70 protein JCR16_RS10470 PF00111 2Fe-2S iron-sulfur cluster binding domain JCR16_RS10475 PF00211 Adenylate and Guanylate cyclase catalytic domain JCR16_RS10485 PF17757 UvrB interaction domain JCR16_RS10485 PF02559 CarD-like/TRCF domain JCR16_RS10485 PF00270 DEAD/DEAH box helicase JCR16_RS10485 PF03461 TRCF domain JCR16_RS10485 PF00271 Helicase conserved C-terminal domain JCR16_RS10505 PF03737 Aldolase/RraA JCR16_RS10510 PF13460 NAD(P)H-binding JCR16_RS10515 PF01649 Ribosomal protein S20 JCR16_RS10525 PF00459 Inositol monophosphatase family JCR16_RS10540 PF00005 ABC transporter JCR16_RS10540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JCR16_RS10545 PF00528 Binding-protein-dependent transport system inner membrane component JCR16_RS10550 PF00528 Binding-protein-dependent transport system inner membrane component JCR16_RS10555 PF01432 Peptidase family M3 JCR16_RS10575 PF00593 TonB dependent receptor JCR16_RS10575 PF07715 TonB-dependent Receptor Plug Domain JCR16_RS10585 PF01618 MotA/TolQ/ExbB proton channel family JCR16_RS10590 PF02472 Biopolymer transport protein ExbD/TolR JCR16_RS10595 PF02472 Biopolymer transport protein ExbD/TolR JCR16_RS10605 PF01274 Malate synthase JCR16_RS10610 PF03969 AFG1-like ATPase JCR16_RS10620 PF00743 Flavin-binding monooxygenase-like JCR16_RS10630 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JCR16_RS10640 PF00216 Bacterial DNA-binding protein JCR16_RS10645 PF00575 S1 RNA binding domain JCR16_RS10650 PF02224 Cytidylate kinase JCR16_RS10660 PF14437 MafB19-like deaminase JCR16_RS10670 PF03167 Uracil DNA glycosylase superfamily JCR16_RS10680 PF03934 Type II secretion system (T2SS), protein K JCR16_RS10685 PF07963 Prokaryotic N-terminal methylation motif JCR16_RS10685 PF11612 Type II secretion system (T2SS), protein J JCR16_RS10690 PF02501 Type II secretion system (T2SS), protein I JCR16_RS10690 PF07963 Prokaryotic N-terminal methylation motif JCR16_RS10705 PF01026 TatD related DNase JCR16_RS10715 PF09115 DNA polymerase III, delta subunit, C terminal JCR16_RS10720 PF02348 Cytidylyltransferase JCR16_RS10725 PF02606 Tetraacyldisaccharide-1-P 4'-kinase JCR16_RS10730 PF00664 ABC transporter transmembrane region JCR16_RS10730 PF00005 ABC transporter JCR16_RS10740 PF01618 MotA/TolQ/ExbB proton channel family JCR16_RS10745 PF02195 ParB-like nuclease domain JCR16_RS10745 PF17762 HTH domain found in ParB protein JCR16_RS10750 PF13614 AAA domain JCR16_RS10755 PF02527 rRNA small subunit methyltransferase G JCR16_RS10760 PF00483 Nucleotidyl transferase JCR16_RS10765 PF01636 Phosphotransferase enzyme family JCR16_RS10770 PF04453 LPS transport system D JCR16_RS10770 PF03968 OstA-like protein JCR16_RS10775 PF00639 PPIC-type PPIASE domain JCR16_RS10775 PF09312 SurA N-terminal domain JCR16_RS10780 PF01116 Fructose-bisphosphate aldolase class-II JCR16_RS10790 PF00162 Phosphoglycerate kinase JCR16_RS10800 PF02545 Maf-like protein JCR16_RS10805 PF08007 Cupin superfamily protein JCR16_RS10820 PF00375 Sodium:dicarboxylate symporter family JCR16_RS10825 PF06912 Protein of unknown function (DUF1275) JCR16_RS10830 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) JCR16_RS10835 PF00005 ABC transporter JCR16_RS10835 PF00664 ABC transporter transmembrane region JCR16_RS10845 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JCR16_RS10845 PF12833 Helix-turn-helix domain JCR16_RS10850 PF01597 Glycine cleavage H-protein JCR16_RS10855 PF02146 Sir2 family JCR16_RS10860 PF00474 Sodium:solute symporter family JCR16_RS10865 PF01037 Lrp/AsnC ligand binding domain JCR16_RS10870 PF01619 Proline dehydrogenase JCR16_RS10870 PF14850 DNA-binding domain of Proline dehydrogenase JCR16_RS10870 PF00171 Aldehyde dehydrogenase family JCR16_RS10870 PF18327 Proline utilization A proline dehydrogenase N-terminal domain JCR16_RS10875 PF04229 GrpB protein JCR16_RS10880 PF05958 tRNA (Uracil-5-)-methyltransferase JCR16_RS10890 PF09992 Phosphodiester glycosidase JCR16_RS10900 PF04264 YceI-like domain JCR16_RS10910 PF00456 Transketolase, thiamine diphosphate binding domain JCR16_RS10910 PF02780 Transketolase, C-terminal domain JCR16_RS10910 PF02779 Transketolase, pyrimidine binding domain JCR16_RS10915 PF02772 S-adenosylmethionine synthetase, central domain JCR16_RS10915 PF00438 S-adenosylmethionine synthetase, N-terminal domain JCR16_RS10915 PF02773 S-adenosylmethionine synthetase, C-terminal domain JCR16_RS10935 PF00905 Penicillin binding protein transpeptidase domain JCR16_RS10950 PF02075 Crossover junction endodeoxyribonuclease RuvC JCR16_RS10955 PF03853 YjeF-related protein N-terminus JCR16_RS10955 PF01256 Carbohydrate kinase JCR16_RS10960 PF08331 Domain of unknown function (DUF1730) JCR16_RS10965 PF06968 Biotin and Thiamin Synthesis associated domain JCR16_RS10965 PF04055 Radical SAM superfamily JCR16_RS10980 PF16970 Type-1 fimbrial protein, A JCR16_RS10985 PF02753 Pili assembly chaperone PapD, C-terminal domain JCR16_RS10985 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JCR16_RS10990 PF00577 Outer membrane usher protein JCR16_RS10990 PF13954 PapC N-terminal domain JCR16_RS10990 PF13953 PapC C-terminal domain JCR16_RS11010 PF00892 EamA-like transporter family JCR16_RS11020 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JCR16_RS11030 PF13737 Transposase DDE domain JCR16_RS11040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR16_RS11040 PF03466 LysR substrate binding domain JCR16_RS11060 PF00440 Bacterial regulatory proteins, tetR family JCR16_RS11070 PF01709 Transcriptional regulator JCR16_RS11080 PF01037 Lrp/AsnC ligand binding domain JCR16_RS11090 PF00005 ABC transporter JCR16_RS11095 PF00528 Binding-protein-dependent transport system inner membrane component JCR16_RS11100 PF00528 Binding-protein-dependent transport system inner membrane component JCR16_RS11115 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR16_RS11115 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JCR16_RS11125 PF00296 Luciferase-like monooxygenase JCR16_RS11130 PF03180 NLPA lipoprotein JCR16_RS11135 PF03180 NLPA lipoprotein JCR16_RS11140 PF09383 NIL domain JCR16_RS11140 PF00005 ABC transporter JCR16_RS11145 PF00528 Binding-protein-dependent transport system inner membrane component JCR16_RS11150 PF06071 Protein of unknown function (DUF933) JCR16_RS11150 PF01926 50S ribosome-binding GTPase JCR16_RS11175 PF03591 AzlC protein JCR16_RS11180 PF05437 Branched-chain amino acid transport protein (AzlD) JCR16_RS11190 PF02222 ATP-grasp domain JCR16_RS11195 PF08335 GlnD PII-uridylyltransferase JCR16_RS11195 PF01966 HD domain JCR16_RS11195 PF01909 Nucleotidyltransferase domain JCR16_RS11200 PF00155 Aminotransferase class I and II JCR16_RS11210 PF12833 Helix-turn-helix domain JCR16_RS11210 PF12852 Cupin JCR16_RS11215 PF00255 Glutathione peroxidase JCR16_RS11220 PF01641 SelR domain JCR16_RS11225 PF00155 Aminotransferase class I and II JCR16_RS11230 PF00375 Sodium:dicarboxylate symporter family JCR16_RS11235 PF17763 Glutaminase/Asparaginase C-terminal domain JCR16_RS11235 PF00710 Asparaginase, N-terminal JCR16_RS11240 PF01336 OB-fold nucleic acid binding domain JCR16_RS11240 PF02811 PHP domain JCR16_RS11240 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JCR16_RS11240 PF14579 Helix-hairpin-helix motif JCR16_RS11240 PF07733 Bacterial DNA polymerase III alpha NTPase domain JCR16_RS11245 PF00588 SpoU rRNA Methylase family JCR16_RS11250 PF00132 Bacterial transferase hexapeptide (six repeats) JCR16_RS11265 PF13192 Thioredoxin domain JCR16_RS11265 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR16_RS11280 PF03466 LysR substrate binding domain JCR16_RS11280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR16_RS11285 PF01758 Sodium Bile acid symporter family JCR16_RS11290 PF01022 Bacterial regulatory protein, arsR family JCR16_RS11295 PF03960 ArsC family JCR16_RS11305 PF13382 Adenine deaminase C-terminal domain JCR16_RS11305 PF01979 Amidohydrolase family JCR16_RS11315 PF03466 LysR substrate binding domain JCR16_RS11315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR16_RS11325 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JCR16_RS11330 PF01177 Asp/Glu/Hydantoin racemase JCR16_RS11335 PF02668 Taurine catabolism dioxygenase TauD, TfdA family JCR16_RS11340 PF00528 Binding-protein-dependent transport system inner membrane component JCR16_RS11345 PF00005 ABC transporter JCR16_RS11350 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JCR16_RS11360 PF00083 Sugar (and other) transporter JCR16_RS11365 PF00296 Luciferase-like monooxygenase JCR16_RS11370 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JCR16_RS11370 PF02770 Acyl-CoA dehydrogenase, middle domain JCR16_RS11370 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR16_RS11380 PF01654 Cytochrome bd terminal oxidase subunit I JCR16_RS11385 PF02322 Cytochrome bd terminal oxidase subunit II JCR16_RS11395 PF00155 Aminotransferase class I and II JCR16_RS11395 PF00392 Bacterial regulatory proteins, gntR family JCR16_RS11400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR16_RS11400 PF03466 LysR substrate binding domain JCR16_RS11415 PF00698 Acyl transferase domain JCR16_RS11420 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG JCR16_RS11430 PF01039 Carboxyl transferase domain JCR16_RS11435 PF06857 Malonate decarboxylase delta subunit (MdcD) JCR16_RS11440 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase JCR16_RS11445 PF16957 Malonate decarboxylase, alpha subunit, transporter JCR16_RS11450 PF07690 Major Facilitator Superfamily JCR16_RS11465 PF00155 Aminotransferase class I and II JCR16_RS11465 PF00392 Bacterial regulatory proteins, gntR family JCR16_RS11470 PF04172 LrgB-like family JCR16_RS11475 PF03788 LrgA family JCR16_RS11480 PF03466 LysR substrate binding domain JCR16_RS11480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR16_RS11485 PF02798 Glutathione S-transferase, N-terminal domain JCR16_RS11485 PF14834 Glutathione S-transferase, C-terminal domain JCR16_RS11490 PF02798 Glutathione S-transferase, N-terminal domain JCR16_RS11495 PF03466 LysR substrate binding domain JCR16_RS11495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR16_RS11505 PF00581 Rhodanese-like domain JCR16_RS11510 PF00132 Bacterial transferase hexapeptide (six repeats) JCR16_RS11520 PF00266 Aminotransferase class-V JCR16_RS11530 PF01810 LysE type translocator JCR16_RS11535 PF03466 LysR substrate binding domain JCR16_RS11535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR16_RS11545 PF00497 Bacterial extracellular solute-binding proteins, family 3 JCR16_RS11550 PF00497 Bacterial extracellular solute-binding proteins, family 3 JCR16_RS11555 PF00005 ABC transporter JCR16_RS11560 PF00528 Binding-protein-dependent transport system inner membrane component JCR16_RS11565 PF00528 Binding-protein-dependent transport system inner membrane component JCR16_RS11580 PF00072 Response regulator receiver domain JCR16_RS11585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR16_RS11585 PF09308 LuxQ, periplasmic JCR16_RS11585 PF00072 Response regulator receiver domain JCR16_RS11585 PF00512 His Kinase A (phospho-acceptor) domain JCR16_RS11595 PF01037 Lrp/AsnC ligand binding domain JCR16_RS11595 PF13404 AsnC-type helix-turn-helix domain JCR16_RS11605 PF00717 Peptidase S24-like JCR16_RS11630 PF18011 C-terminal domain found in long catalases JCR16_RS11630 PF06628 Catalase-related immune-responsive JCR16_RS11630 PF00199 Catalase JCR16_RS11640 PF00994 Probable molybdopterin binding domain JCR16_RS11640 PF18146 Damage-inducible protein CinA KH domain JCR16_RS11640 PF02464 Competence-damaged protein JCR16_RS11675 PF03466 LysR substrate binding domain JCR16_RS11675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR16_RS11695 PF13193 AMP-binding enzyme C-terminal domain JCR16_RS11695 PF00501 AMP-binding enzyme JCR16_RS11700 PF00440 Bacterial regulatory proteins, tetR family JCR16_RS11705 PF02770 Acyl-CoA dehydrogenase, middle domain JCR16_RS11705 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR16_RS11705 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR16_RS11710 PF01039 Carboxyl transferase domain JCR16_RS11715 PF00378 Enoyl-CoA hydratase/isomerase JCR16_RS11720 PF18140 Propionyl-coenzyme A carboxylase BT domain JCR16_RS11720 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JCR16_RS11720 PF00364 Biotin-requiring enzyme JCR16_RS11720 PF00289 Biotin carboxylase, N-terminal domain JCR16_RS11720 PF02785 Biotin carboxylase C-terminal domain JCR16_RS11725 PF00682 HMGL-like JCR16_RS11730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR16_RS11730 PF03466 LysR substrate binding domain JCR16_RS11745 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR16_RS11745 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR16_RS11745 PF02770 Acyl-CoA dehydrogenase, middle domain JCR16_RS11745 PF12806 Acetyl-CoA dehydrogenase C-terminal like JCR16_RS11755 PF07690 Major Facilitator Superfamily JCR16_RS11765 PF01144 Coenzyme A transferase JCR16_RS11770 PF01144 Coenzyme A transferase JCR16_RS11775 PF07690 Major Facilitator Superfamily JCR16_RS11780 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR16_RS11780 PF02770 Acyl-CoA dehydrogenase, middle domain JCR16_RS11780 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR16_RS11785 PF00378 Enoyl-CoA hydratase/isomerase JCR16_RS11795 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JCR16_RS11795 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain JCR16_RS11795 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JCR16_RS11800 PF02803 Thiolase, C-terminal domain JCR16_RS11800 PF00108 Thiolase, N-terminal domain JCR16_RS11805 PF09339 IclR helix-turn-helix domain JCR16_RS11810 PF07690 Major Facilitator Superfamily JCR16_RS11815 PF03060 Nitronate monooxygenase JCR16_RS11820 PF00378 Enoyl-CoA hydratase/isomerase JCR16_RS11825 PF09339 IclR helix-turn-helix domain JCR16_RS11830 PF02515 CoA-transferase family III JCR16_RS11835 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR16_RS11835 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR16_RS11835 PF02770 Acyl-CoA dehydrogenase, middle domain JCR16_RS11840 PF07690 Major Facilitator Superfamily JCR16_RS11845 PF13419 Haloacid dehalogenase-like hydrolase JCR16_RS11850 PF00266 Aminotransferase class-V JCR16_RS11855 PF01266 FAD dependent oxidoreductase JCR16_RS11860 PF00528 Binding-protein-dependent transport system inner membrane component JCR16_RS11865 PF08402 TOBE domain JCR16_RS11865 PF00005 ABC transporter JCR16_RS11875 PF00392 Bacterial regulatory proteins, gntR family JCR16_RS11875 PF07702 UTRA domain JCR16_RS11880 PF01494 FAD binding domain JCR16_RS11885 PF09339 IclR helix-turn-helix domain JCR16_RS11885 PF01614 Bacterial transcriptional regulator JCR16_RS11890 PF02525 Flavodoxin-like fold JCR16_RS11895 PF03466 LysR substrate binding domain JCR16_RS11895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR16_RS11900 PF02627 Carboxymuconolactone decarboxylase family JCR16_RS11905 PF00171 Aldehyde dehydrogenase family JCR16_RS11915 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JCR16_RS11925 PF00171 Aldehyde dehydrogenase family JCR16_RS11930 PF00296 Luciferase-like monooxygenase JCR16_RS11935 PF01613 Flavin reductase like domain JCR16_RS11940 PF12697 Alpha/beta hydrolase family JCR16_RS11960 PF01292 Prokaryotic cytochrome b561 JCR16_RS11965 PF00199 Catalase JCR16_RS12000 PF03061 Thioesterase superfamily JCR16_RS12005 PF00132 Bacterial transferase hexapeptide (six repeats) JCR16_RS12010 PF07848 PaaX-like protein JCR16_RS12010 PF08223 PaaX-like protein C-terminal domain JCR16_RS12015 PF00501 AMP-binding enzyme JCR16_RS12015 PF14535 AMP-binding enzyme C-terminal domain JCR16_RS12020 PF00108 Thiolase, N-terminal domain JCR16_RS12020 PF02803 Thiolase, C-terminal domain JCR16_RS12025 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JCR16_RS12025 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JCR16_RS12025 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain JCR16_RS12030 PF00378 Enoyl-CoA hydratase/isomerase JCR16_RS12035 PF00378 Enoyl-CoA hydratase/isomerase JCR16_RS12040 PF00970 Oxidoreductase FAD-binding domain JCR16_RS12040 PF00175 Oxidoreductase NAD-binding domain JCR16_RS12040 PF00111 2Fe-2S iron-sulfur cluster binding domain JCR16_RS12045 PF01883 Iron-sulfur cluster assembly protein JCR16_RS12050 PF05138 Phenylacetic acid catabolic protein JCR16_RS12055 PF06243 Phenylacetic acid degradation B JCR16_RS12060 PF05138 Phenylacetic acid catabolic protein JCR16_RS12065 PF01575 MaoC like domain JCR16_RS12065 PF00171 Aldehyde dehydrogenase family JCR16_RS12070 PF03315 Serine dehydratase beta chain JCR16_RS12070 PF03313 Serine dehydratase alpha chain JCR16_RS12075 PF13520 Amino acid permease JCR16_RS12080 PF00171 Aldehyde dehydrogenase family JCR16_RS12085 PF00083 Sugar (and other) transporter JCR16_RS12095 PF04324 BFD-like [2Fe-2S] binding domain JCR16_RS12095 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR16_RS12105 PF01266 FAD dependent oxidoreductase JCR16_RS12110 PF05544 Proline racemase JCR16_RS12115 PF00392 Bacterial regulatory proteins, gntR family JCR16_RS12125 PF00701 Dihydrodipicolinate synthetase family JCR16_RS12135 PF09278 MerR, DNA binding JCR16_RS12135 PF00376 MerR family regulatory protein JCR16_RS12155 PF00005 ABC transporter JCR16_RS12160 PF00497 Bacterial extracellular solute-binding proteins, family 3 JCR16_RS12165 PF01425 Amidase JCR16_RS12170 PF08753 NikR C terminal nickel binding domain JCR16_RS12170 PF01402 Ribbon-helix-helix protein, copG family JCR16_RS12190 PF02525 Flavodoxin-like fold JCR16_RS12195 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JCR16_RS12195 PF02785 Biotin carboxylase C-terminal domain JCR16_RS12195 PF00289 Biotin carboxylase, N-terminal domain JCR16_RS12210 PF13823 Alcohol dehydrogenase GroES-associated JCR16_RS12210 PF00107 Zinc-binding dehydrogenase JCR16_RS12210 PF08240 Alcohol dehydrogenase GroES-like domain JCR16_RS12220 PF00440 Bacterial regulatory proteins, tetR family JCR16_RS12240 PF00654 Voltage gated chloride channel JCR16_RS12245 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JCR16_RS12245 PF00364 Biotin-requiring enzyme JCR16_RS12245 PF00289 Biotin carboxylase, N-terminal domain JCR16_RS12245 PF02785 Biotin carboxylase C-terminal domain JCR16_RS12255 PF07286 Protein of unknown function (DUF1445) JCR16_RS12260 PF03746 LamB/YcsF family JCR16_RS12265 PF01566 Natural resistance-associated macrophage protein JCR16_RS12270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR16_RS12270 PF03466 LysR substrate binding domain JCR16_RS12285 PF05593 RHS Repeat JCR16_RS12285 PF03527 RHS protein JCR16_RS12290 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) JCR16_RS12290 PF04717 Type VI secretion system, phage-baseplate injector JCR16_RS12290 PF13296 Putative type VI secretion system Rhs element Vgr JCR16_RS12300 PF13419 Haloacid dehalogenase-like hydrolase JCR16_RS12320 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JCR16_RS12320 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JCR16_RS12340 PF07690 Major Facilitator Superfamily JCR16_RS12350 PF03279 Bacterial lipid A biosynthesis acyltransferase JCR16_RS12355 PF00563 EAL domain JCR16_RS12355 PF03707 Bacterial signalling protein N terminal repeat JCR16_RS12355 PF00990 Diguanylate cyclase, GGDEF domain JCR16_RS12360 PF00892 EamA-like transporter family JCR16_RS12365 PF01037 Lrp/AsnC ligand binding domain JCR16_RS12370 PF05188 MutS domain II JCR16_RS12370 PF05192 MutS domain III JCR16_RS12370 PF01624 MutS domain I JCR16_RS12370 PF05190 MutS family domain IV JCR16_RS12370 PF00488 MutS domain V JCR16_RS12380 PF11953 Domain of unknown function (DUF3470) JCR16_RS12380 PF00037 4Fe-4S binding domain JCR16_RS12390 PF01596 O-methyltransferase JCR16_RS12400 PF00132 Bacterial transferase hexapeptide (six repeats) JCR16_RS12405 PF01205 Uncharacterized protein family UPF0029 JCR16_RS12415 PF00664 ABC transporter transmembrane region JCR16_RS12415 PF03412 Peptidase C39 family JCR16_RS12415 PF00005 ABC transporter JCR16_RS12420 PF02321 Outer membrane efflux protein JCR16_RS12425 PF12399 Branched-chain amino acid ATP-binding cassette transporter JCR16_RS12425 PF00005 ABC transporter JCR16_RS12430 PF03968 OstA-like protein JCR16_RS12445 PF00571 CBS domain JCR16_RS12445 PF01380 SIS domain JCR16_RS12450 PF09190 DALR domain JCR16_RS12450 PF01406 tRNA synthetases class I (C) catalytic domain JCR16_RS12475 PF13737 Transposase DDE domain JCR16_RS12480 PF01638 HxlR-like helix-turn-helix JCR16_RS12485 PF07690 Major Facilitator Superfamily JCR16_RS12510 PF03807 NADP oxidoreductase coenzyme F420-dependent JCR16_RS12510 PF14748 Pyrroline-5-carboxylate reductase dimerisation JCR16_RS12520 PF00313 'Cold-shock' DNA-binding domain JCR16_RS12525 PF01810 LysE type translocator JCR16_RS12555 PF02601 Exonuclease VII, large subunit JCR16_RS12555 PF13742 OB-fold nucleic acid binding domain JCR16_RS12590 PF09278 MerR, DNA binding JCR16_RS12590 PF00376 MerR family regulatory protein JCR16_RS12595 PF00403 Heavy-metal-associated domain JCR16_RS12605 PF03466 LysR substrate binding domain JCR16_RS12605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR16_RS12610 PF00355 Rieske [2Fe-2S] domain JCR16_RS12610 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JCR16_RS12615 PF00866 Ring hydroxylating beta subunit JCR16_RS12620 PF00175 Oxidoreductase NAD-binding domain JCR16_RS12620 PF00111 2Fe-2S iron-sulfur cluster binding domain JCR16_RS12620 PF00970 Oxidoreductase FAD-binding domain JCR16_RS12625 PF00106 short chain dehydrogenase JCR16_RS12630 PF03594 Benzoate membrane transport protein JCR16_RS12635 PF07690 Major Facilitator Superfamily JCR16_RS12645 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JCR16_RS12645 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JCR16_RS12650 PF04408 Helicase associated domain (HA2) JCR16_RS12650 PF00271 Helicase conserved C-terminal domain JCR16_RS12650 PF00270 DEAD/DEAH box helicase JCR16_RS12650 PF11898 Domain of unknown function (DUF3418) JCR16_RS12650 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold JCR16_RS12655 PF00578 AhpC/TSA family JCR16_RS12655 PF10417 C-terminal domain of 1-Cys peroxiredoxin JCR16_RS12675 PF13192 Thioredoxin domain JCR16_RS12675 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR16_RS12685 PF00043 Glutathione S-transferase, C-terminal domain JCR16_RS12685 PF02798 Glutathione S-transferase, N-terminal domain JCR16_RS12695 PF02390 Putative methyltransferase JCR16_RS12700 PF00043 Glutathione S-transferase, C-terminal domain JCR16_RS12700 PF13417 Glutathione S-transferase, N-terminal domain JCR16_RS12710 PF13488 Glycine zipper JCR16_RS12710 PF00691 OmpA family JCR16_RS12715 PF01979 Amidohydrolase family JCR16_RS12720 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JCR16_RS12720 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JCR16_RS12730 PF01170 Putative RNA methylase family UPF0020 JCR16_RS12730 PF02926 THUMP domain JCR16_RS12730 PF10672 S-adenosylmethionine-dependent methyltransferase JCR16_RS12745 PF00004 ATPase family associated with various cellular activities (AAA) JCR16_RS12745 PF07724 AAA domain (Cdc48 subfamily) JCR16_RS12745 PF17871 AAA lid domain JCR16_RS12745 PF02861 Clp amino terminal domain, pathogenicity island component JCR16_RS12745 PF10431 C-terminal, D2-small domain, of ClpB protein JCR16_RS12760 PF02566 OsmC-like protein JCR16_RS12770 PF13545 Crp-like helix-turn-helix domain JCR16_RS12770 PF00027 Cyclic nucleotide-binding domain JCR16_RS12780 PF00248 Aldo/keto reductase family JCR16_RS12795 PF00709 Adenylosuccinate synthetase JCR16_RS12800 PF13393 Histidyl-tRNA synthetase JCR16_RS12805 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JCR16_RS12805 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JCR16_RS12810 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JCR16_RS12810 PF01411 tRNA synthetases class II (A) JCR16_RS12810 PF02272 DHHA1 domain JCR16_RS12815 PF13840 ACT domain JCR16_RS12815 PF01842 ACT domain JCR16_RS12815 PF00696 Amino acid kinase family JCR16_RS12820 PF02599 Global regulator protein family JCR16_RS12825 PF01351 Ribonuclease HII JCR16_RS12835 PF01292 Prokaryotic cytochrome b561 JCR16_RS12840 PF00962 Adenosine/AMP deaminase JCR16_RS12845 PF00860 Permease family JCR16_RS12855 PF00743 Flavin-binding monooxygenase-like JCR16_RS12860 PF00106 short chain dehydrogenase JCR16_RS12870 PF02678 Pirin JCR16_RS12870 PF17954 Quercetinase C-terminal cupin domain JCR16_RS12875 PF00440 Bacterial regulatory proteins, tetR family JCR16_RS12875 PF17932 Tetracyclin repressor-like, C-terminal domain JCR16_RS12885 PF00106 short chain dehydrogenase JCR16_RS12895 PF13610 DDE domain JCR16_RS12905 PF04717 Type VI secretion system, phage-baseplate injector JCR16_RS12905 PF13296 Putative type VI secretion system Rhs element Vgr JCR16_RS12905 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) JCR16_RS12925 PF13737 Transposase DDE domain JCR16_RS12930 PF03180 NLPA lipoprotein JCR16_RS12935 PF05987 Bacterial protein of unknown function (DUF898) JCR16_RS12950 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR16_RS12950 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JCR16_RS12955 PF00764 Arginosuccinate synthase JCR16_RS12960 PF00360 Phytochrome region JCR16_RS12960 PF00563 EAL domain JCR16_RS12960 PF01590 GAF domain JCR16_RS12960 PF00990 Diguanylate cyclase, GGDEF domain JCR16_RS12965 PF01979 Amidohydrolase family JCR16_RS12970 PF00929 Exonuclease JCR16_RS12980 PF07715 TonB-dependent Receptor Plug Domain JCR16_RS12980 PF00593 TonB dependent receptor JCR16_RS12985 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JCR16_RS12985 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR16_RS12990 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JCR16_RS12990 PF00005 ABC transporter JCR16_RS12995 PF00528 Binding-protein-dependent transport system inner membrane component JCR16_RS12995 PF12911 N-terminal TM domain of oligopeptide transport permease C JCR16_RS13000 PF00528 Binding-protein-dependent transport system inner membrane component JCR16_RS13005 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JCR16_RS13010 PF01476 LysM domain JCR16_RS13010 PF01464 Transglycosylase SLT domain JCR16_RS13010 PF01476 LysM domain JCR16_RS13010 PF01464 Transglycosylase SLT domain JCR16_RS13015 PF00929 Exonuclease JCR16_RS13025 PF00293 NUDIX domain JCR16_RS13025 PF09297 NADH pyrophosphatase zinc ribbon domain JCR16_RS13035 PF04972 BON domain JCR16_RS13040 PF02021 Uncharacterised protein family UPF0102 JCR16_RS13045 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JCR16_RS13055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR16_RS13055 PF03466 LysR substrate binding domain JCR16_RS13060 PF01810 LysE type translocator JCR16_RS13070 PF13411 MerR HTH family regulatory protein JCR16_RS13080 PF01494 FAD binding domain JCR16_RS13085 PF01494 FAD binding domain JCR16_RS13090 PF05195 Aminopeptidase P, N-terminal domain JCR16_RS13090 PF00557 Metallopeptidase family M24 JCR16_RS13130 PF00884 Sulfatase JCR16_RS13130 PF08019 Phosphoethanolamine transferase EptA/EptB JCR16_RS13135 PF13737 Transposase DDE domain JCR16_RS13180 PF01551 Peptidase family M23 JCR16_RS13180 PF08525 Opacity-associated protein A N-terminal motif JCR16_RS13180 PF01476 LysM domain JCR16_RS13505 PF01812 5-formyltetrahydrofolate cyclo-ligase family JCR16_RS13510 PF00691 OmpA family JCR16_RS13510 PF04355 SmpA / OmlA family JCR16_RS13515 PF05658 Head domain of trimeric autotransporter adhesin JCR16_RS13515 PF13018 Extended Signal Peptide of Type V secretion system JCR16_RS13515 PF03895 YadA-like membrane anchor domain JCR16_RS13515 PF05662 Coiled stalk of trimeric autotransporter adhesin JCR16_RS13520 PF00004 ATPase family associated with various cellular activities (AAA) JCR16_RS13520 PF05362 Lon protease (S16) C-terminal proteolytic domain JCR16_RS13520 PF02190 ATP-dependent protease La (LON) substrate-binding domain JCR16_RS13525 PF02590 Predicted SPOUT methyltransferase JCR16_RS13530 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase JCR16_RS13540 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JCR16_RS13540 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JCR16_RS13545 PF04060 Putative Fe-S cluster JCR16_RS13550 PF00730 HhH-GPD superfamily base excision DNA repair protein JCR16_RS13550 PF00633 Helix-hairpin-helix motif JCR16_RS13550 PF10576 Iron-sulfur binding domain of endonuclease III JCR16_RS13560 PF05191 Adenylate kinase, active site lid JCR16_RS13575 PF00905 Penicillin binding protein transpeptidase domain JCR16_RS13575 PF03717 Penicillin-binding Protein dimerisation domain JCR16_RS13590 PF02492 CobW/HypB/UreG, nucleotide-binding domain JCR16_RS13595 PF01730 UreF JCR16_RS13600 PF05194 UreE urease accessory protein, C-terminal domain JCR16_RS13600 PF02814 UreE urease accessory protein, N-terminal domain JCR16_RS13610 PF00547 Urease, gamma subunit JCR16_RS13615 PF01774 UreD urease accessory protein JCR16_RS13630 PF00463 Isocitrate lyase family JCR16_RS13635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR16_RS13635 PF03466 LysR substrate binding domain JCR16_RS13640 PF03471 Transporter associated domain JCR16_RS13640 PF00571 CBS domain JCR16_RS13640 PF01595 Cyclin M transmembrane N-terminal domain JCR16_RS13645 PF03600 Citrate transporter JCR16_RS13660 PF00009 Elongation factor Tu GTP binding domain JCR16_RS13665 PF01507 Phosphoadenosine phosphosulfate reductase family JCR16_RS13675 PF14052 Capsule assembly protein Wzi JCR16_RS13680 PF01336 OB-fold nucleic acid binding domain JCR16_RS13680 PF00152 tRNA synthetases class II (D, K and N) JCR16_RS13695 PF00301 Rubredoxin JCR16_RS13700 PF18113 Rubredoxin binding C-terminal domain JCR16_RS13700 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR16_RS13705 PF00561 alpha/beta hydrolase fold JCR16_RS13710 PF03466 LysR substrate binding domain JCR16_RS13710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR16_RS13720 PF02503 Polyphosphate kinase middle domain JCR16_RS13720 PF13090 Polyphosphate kinase C-terminal domain 2 JCR16_RS13720 PF17941 Polyphosphate kinase C-terminal domain 1 JCR16_RS13720 PF13089 Polyphosphate kinase N-terminal domain JCR16_RS13725 PF00912 Transglycosylase JCR16_RS13730 PF01694 Rhomboid family JCR16_RS13740 PF00005 ABC transporter JCR16_RS13745 PF13472 GDSL-like Lipase/Acylhydrolase family JCR16_RS13750 PF00484 Carbonic anhydrase JCR16_RS13755 PF00561 alpha/beta hydrolase fold JCR16_RS13765 PF07715 TonB-dependent Receptor Plug Domain JCR16_RS13765 PF00593 TonB dependent receptor JCR16_RS13770 PF01106 NifU-like domain JCR16_RS13770 PF01521 Iron-sulphur cluster biosynthesis JCR16_RS13780 PF00884 Sulfatase JCR16_RS13785 PF03781 Sulfatase-modifying factor enzyme 1 JCR16_RS13800 PF00291 Pyridoxal-phosphate dependent enzyme JCR16_RS13805 PF01384 Phosphate transporter family JCR16_RS13810 PF02965 Vitamin B12 dependent methionine synthase, activation domain JCR16_RS13810 PF02310 B12 binding domain JCR16_RS13810 PF02574 Homocysteine S-methyltransferase JCR16_RS13810 PF02607 B12 binding domain JCR16_RS13810 PF00809 Pterin binding enzyme JCR16_RS13815 PF02780 Transketolase, C-terminal domain JCR16_RS13815 PF02779 Transketolase, pyrimidine binding domain JCR16_RS13820 PF00456 Transketolase, thiamine diphosphate binding domain JCR16_RS13825 PF07690 Major Facilitator Superfamily JCR16_RS13835 PF03466 LysR substrate binding domain JCR16_RS13835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR16_RS13845 PF01263 Aldose 1-epimerase JCR16_RS13850 PF07690 Major Facilitator Superfamily JCR16_RS13855 PF12833 Helix-turn-helix domain JCR16_RS13855 PF02311 AraC-like ligand binding domain JCR16_RS13860 PF04960 Glutaminase JCR16_RS13865 PF01327 Polypeptide deformylase JCR16_RS13870 PF07690 Major Facilitator Superfamily JCR16_RS13880 PF00205 Thiamine pyrophosphate enzyme, central domain JCR16_RS13880 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JCR16_RS13880 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JCR16_RS13885 PF00171 Aldehyde dehydrogenase family JCR16_RS13890 PF03447 Homoserine dehydrogenase, NAD binding domain JCR16_RS13890 PF01958 Domain of unknown function DUF108 JCR16_RS13900 PF12697 Alpha/beta hydrolase family JCR16_RS13910 PF07690 Major Facilitator Superfamily JCR16_RS13915 PF14759 Reductase C-terminal JCR16_RS13915 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR16_RS13920 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JCR16_RS13930 PF00355 Rieske [2Fe-2S] domain JCR16_RS13940 PF00355 Rieske [2Fe-2S] domain JCR16_RS13945 PF01614 Bacterial transcriptional regulator JCR16_RS13945 PF09339 IclR helix-turn-helix domain JCR16_RS13960 PF00378 Enoyl-CoA hydratase/isomerase JCR16_RS13970 PF00535 Glycosyl transferase family 2 JCR16_RS13975 PF01522 Polysaccharide deacetylase JCR16_RS13975 PF14883 Hypothetical glycosyl hydrolase family 13 JCR16_RS13980 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JCR16_RS13985 PF07152 YaeQ protein JCR16_RS13990 PF00375 Sodium:dicarboxylate symporter family JCR16_RS13995 PF07683 Cobalamin synthesis protein cobW C-terminal domain JCR16_RS13995 PF02492 CobW/HypB/UreG, nucleotide-binding domain JCR16_RS14005 PF03061 Thioesterase superfamily JCR16_RS14015 PF02028 BCCT, betaine/carnitine/choline family transporter JCR16_RS14020 PF02028 BCCT, betaine/carnitine/choline family transporter JCR16_RS14025 PF00440 Bacterial regulatory proteins, tetR family JCR16_RS14025 PF13977 BetI-type transcriptional repressor, C-terminal JCR16_RS14030 PF00171 Aldehyde dehydrogenase family JCR16_RS14035 PF00732 GMC oxidoreductase JCR16_RS14035 PF05199 GMC oxidoreductase JCR16_RS14040 PF06039 Malate:quinone oxidoreductase (Mqo) JCR16_RS14050 PF02574 Homocysteine S-methyltransferase JCR16_RS14055 PF13520 Amino acid permease JCR16_RS14080 PF01126 Heme oxygenase JCR16_RS14090 PF04575 Protein of unknown function (DUF560) JCR16_RS14100 PF07715 TonB-dependent Receptor Plug Domain JCR16_RS14100 PF00593 TonB dependent receptor JCR16_RS14110 PF08281 Sigma-70, region 4 JCR16_RS14110 PF04542 Sigma-70 region 2 JCR16_RS14120 PF00701 Dihydrodipicolinate synthetase family JCR16_RS14125 PF00083 Sugar (and other) transporter JCR16_RS14255 PF00712 DNA polymerase III beta subunit, N-terminal domain JCR16_RS14255 PF02767 DNA polymerase III beta subunit, central domain JCR16_RS14255 PF02768 DNA polymerase III beta subunit, C-terminal domain JCR16_RS14295 PF05016 ParE toxin of type II toxin-antitoxin system, parDE JCR16_RS14500 PF01695 IstB-like ATP binding protein JCR16_RS14510 PF01555 DNA methylase JCR16_RS14565 PF01381 Helix-turn-helix JCR16_RS14635 PF13737 Transposase DDE domain JCR16_RS14670 PF07690 Major Facilitator Superfamily JCR16_RS14675 PF13533 Biotin-lipoyl like JCR16_RS14680 PF03061 Thioesterase superfamily JCR16_RS14685 PF00490 Delta-aminolevulinic acid dehydratase JCR16_RS14690 PF01266 FAD dependent oxidoreductase JCR16_RS14695 PF08338 Domain of unknown function (DUF1731) JCR16_RS14695 PF01370 NAD dependent epimerase/dehydratase family JCR16_RS14715 PF12320 Type 5 capsule protein repressor C-terminal domain JCR16_RS14715 PF00149 Calcineurin-like phosphoesterase JCR16_RS14725 PF01168 Alanine racemase, N-terminal domain JCR16_RS14730 PF00437 Type II/IV secretion system protein JCR16_RS14735 PF00437 Type II/IV secretion system protein JCR16_RS14740 PF01475 Ferric uptake regulator family JCR16_RS14745 PF04355 SmpA / OmlA family JCR16_RS14750 PF03658 RnfH family Ubiquitin JCR16_RS14760 PF01814 Hemerythrin HHE cation binding domain JCR16_RS14765 PF13230 Glutamine amidotransferases class-II JCR16_RS14775 PF00696 Amino acid kinase family JCR16_RS14780 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JCR16_RS14780 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JCR16_RS14780 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JCR16_RS14780 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JCR16_RS14785 PF00692 dUTPase JCR16_RS14790 PF00580 UvrD/REP helicase N-terminal domain JCR16_RS14790 PF13361 UvrD-like helicase C-terminal domain JCR16_RS14795 PF00691 OmpA family JCR16_RS14795 PF13488 Glycine zipper JCR16_RS14800 PF01553 Acyltransferase JCR16_RS14810 PF03775 Septum formation inhibitor MinC, C-terminal domain JCR16_RS14815 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JCR16_RS14820 PF03776 Septum formation topological specificity factor MinE JCR16_RS14840 PF01810 LysE type translocator JCR16_RS14845 PF13491 4TM region of DNA translocase FtsK/SpoIIIE JCR16_RS14845 PF01580 FtsK/SpoIIIE family JCR16_RS14845 PF17854 FtsK alpha domain JCR16_RS14845 PF09397 Ftsk gamma domain JCR16_RS14850 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCR16_RS14855 PF03588 Leucyl/phenylalanyl-tRNA protein transferase JCR16_RS14860 PF04377 Arginine-tRNA-protein transferase, C terminus JCR16_RS14860 PF04376 Arginine-tRNA-protein transferase, N terminus JCR16_RS14865 PF00583 Acetyltransferase (GNAT) family JCR16_RS14885 PF03143 Elongation factor Tu C-terminal domain JCR16_RS14885 PF00009 Elongation factor Tu GTP binding domain JCR16_RS14885 PF03144 Elongation factor Tu domain 2 JCR16_RS14890 PF00009 Elongation factor Tu GTP binding domain JCR16_RS14890 PF03144 Elongation factor Tu domain 2 JCR16_RS14890 PF03764 Elongation factor G, domain IV JCR16_RS14890 PF14492 Elongation Factor G, domain II JCR16_RS14890 PF00679 Elongation factor G C-terminus JCR16_RS14895 PF00177 Ribosomal protein S7p/S5e JCR16_RS14900 PF00164 Ribosomal protein S12/S23 JCR16_RS14910 PF02801 Beta-ketoacyl synthase, C-terminal domain JCR16_RS14910 PF00109 Beta-ketoacyl synthase, N-terminal domain JCR16_RS14915 PF03653 Uncharacterised protein family (UPF0093) JCR16_RS14920 PF05726 Pirin C-terminal cupin domain JCR16_RS14920 PF02678 Pirin JCR16_RS14930 PF02540 NAD synthase JCR16_RS14930 PF00795 Carbon-nitrogen hydrolase JCR16_RS14945 PF00175 Oxidoreductase NAD-binding domain JCR16_RS14945 PF00970 Oxidoreductase FAD-binding domain JCR16_RS14945 PF00111 2Fe-2S iron-sulfur cluster binding domain JCR16_RS14950 PF00171 Aldehyde dehydrogenase family JCR16_RS14955 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JCR16_RS14955 PF00355 Rieske [2Fe-2S] domain JCR16_RS14960 PF07859 alpha/beta hydrolase fold JCR16_RS14965 PF02028 BCCT, betaine/carnitine/choline family transporter JCR16_RS14970 PF00180 Isocitrate/isopropylmalate dehydrogenase JCR16_RS14975 PF03466 LysR substrate binding domain JCR16_RS14975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR16_RS14995 PF00037 4Fe-4S binding domain JCR16_RS15000 PF01467 Cytidylyltransferase-like JCR16_RS15005 PF01668 SmpB protein JCR16_RS15010 PF03358 NADPH-dependent FMN reductase JCR16_RS15015 PF02578 Multi-copper polyphenol oxidoreductase laccase JCR16_RS15020 PF01479 S4 domain JCR16_RS15020 PF00849 RNA pseudouridylate synthase JCR16_RS15025 PF13525 Outer membrane lipoprotein JCR16_RS15030 PF08278 DNA primase DnaG DnaB-binding JCR16_RS15030 PF01807 CHC2 zinc finger JCR16_RS15030 PF08275 DNA primase catalytic core, N-terminal domain JCR16_RS15030 PF10410 DnaB-helicase binding domain of primase JCR16_RS15035 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain JCR16_RS15035 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain JCR16_RS15035 PF01488 Shikimate / quinate 5-dehydrogenase JCR16_RS15045 PF03550 Outer membrane lipoprotein LolB JCR16_RS15050 PF08544 GHMP kinases C terminal JCR16_RS15050 PF00288 GHMP kinases N terminal domain JCR16_RS15075 PF14572 Phosphoribosyl synthetase-associated domain JCR16_RS15075 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JCR16_RS15080 PF01386 Ribosomal L25p family JCR16_RS15085 PF01195 Peptidyl-tRNA hydrolase JCR16_RS15090 PF02261 Aspartate decarboxylase JCR16_RS15105 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JCR16_RS15115 PF03070 TENA/THI-4/PQQC family JCR16_RS15115 PF08543 Phosphomethylpyrimidine kinase JCR16_RS15115 PF02581 Thiamine monophosphate synthase JCR16_RS15120 PF01476 LysM domain JCR16_RS15120 PF04972 BON domain JCR16_RS15125 PF00550 Phosphopantetheine attachment site JCR16_RS15135 PF00698 Acyl transferase domain JCR16_RS15140 PF01783 Ribosomal L32p protein family JCR16_RS15145 PF02620 Large ribosomal RNA subunit accumulation protein YceD JCR16_RS15150 PF04315 Elongation factor P hydroxylase JCR16_RS15155 PF01300 Telomere recombination JCR16_RS15160 PF02616 Segregation and condensation protein ScpA JCR16_RS15165 PF04079 Segregation and condensation complex subunit ScpB JCR16_RS15170 PF00849 RNA pseudouridylate synthase JCR16_RS15170 PF01479 S4 domain JCR16_RS15185 PF00155 Aminotransferase class I and II JCR16_RS15190 PF04055 Radical SAM superfamily JCR16_RS15190 PF06968 Biotin and Thiamin Synthesis associated domain JCR16_RS15190 PF00202 Aminotransferase class-III JCR16_RS15195 PF08241 Methyltransferase domain JCR16_RS15195 PF12697 Alpha/beta hydrolase family JCR16_RS15200 PF02358 Trehalose-phosphatase JCR16_RS15205 PF00982 Glycosyltransferase family 20 JCR16_RS15210 PF07690 Major Facilitator Superfamily JCR16_RS15215 PF00210 Ferritin-like domain JCR16_RS15220 PF00533 BRCA1 C Terminus (BRCT) domain JCR16_RS15220 PF03120 NAD-dependent DNA ligase OB-fold domain JCR16_RS15220 PF01653 NAD-dependent DNA ligase adenylation domain JCR16_RS15220 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JCR16_RS15220 PF12826 Helix-hairpin-helix motif JCR16_RS15230 PF06470 SMC proteins Flexible Hinge Domain JCR16_RS15230 PF02463 RecF/RecN/SMC N terminal domain JCR16_RS15240 PF01925 Sulfite exporter TauE/SafE JCR16_RS15250 PF03309 Type III pantothenate kinase JCR16_RS15255 PF00448 SRP54-type protein, GTPase domain JCR16_RS15255 PF02881 SRP54-type protein, helical bundle domain JCR16_RS15255 PF02978 Signal peptide binding domain JCR16_RS15265 PF01207 Dihydrouridine synthase (Dus) JCR16_RS15295 PF00692 dUTPase JCR16_RS15310 PF01048 Phosphorylase superfamily JCR16_RS15315 PF10609 NUBPL iron-transfer P-loop NTPase JCR16_RS15325 PF01588 Putative tRNA binding domain JCR16_RS15325 PF09334 tRNA synthetases class I (M) JCR16_RS15350 PF13533 Biotin-lipoyl like JCR16_RS15355 PF00291 Pyridoxal-phosphate dependent enzyme JCR16_RS15370 PF05552 Conserved TM helix JCR16_RS15385 PF00175 Oxidoreductase NAD-binding domain JCR16_RS15385 PF00970 Oxidoreductase FAD-binding domain JCR16_RS15390 PF03466 LysR substrate binding domain JCR16_RS15390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR16_RS15395 PF00313 'Cold-shock' DNA-binding domain JCR16_RS15405 PF00361 Proton-conducting membrane transporter JCR16_RS15410 PF00361 Proton-conducting membrane transporter JCR16_RS15415 PF00361 Proton-conducting membrane transporter JCR16_RS15415 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JCR16_RS15420 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JCR16_RS15425 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 JCR16_RS15430 PF12838 4Fe-4S dicluster domain JCR16_RS15435 PF00146 NADH dehydrogenase JCR16_RS15440 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JCR16_RS15440 PF00384 Molybdopterin oxidoreductase JCR16_RS15440 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JCR16_RS15445 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit JCR16_RS15445 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region JCR16_RS15445 PF10531 SLBB domain JCR16_RS15455 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit JCR16_RS15455 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit JCR16_RS15460 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit JCR16_RS15465 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 JCR16_RS15480 PF00512 His Kinase A (phospho-acceptor) domain JCR16_RS15480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR16_RS15480 PF00672 HAMP domain JCR16_RS15485 PF00486 Transcriptional regulatory protein, C terminal JCR16_RS15485 PF00072 Response regulator receiver domain JCR16_RS15495 PF03477 ATP cone domain JCR16_RS15495 PF02867 Ribonucleotide reductase, barrel domain JCR16_RS15495 PF00317 Ribonucleotide reductase, all-alpha domain JCR16_RS15505 PF00268 Ribonucleotide reductase, small chain JCR16_RS15515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR16_RS15515 PF00512 His Kinase A (phospho-acceptor) domain JCR16_RS15515 PF00672 HAMP domain JCR16_RS15515 PF13756 Stimulus-sensing domain JCR16_RS15515 PF13755 Sensor N-terminal transmembrane domain JCR16_RS15555 PF13737 Transposase DDE domain JCR16_RS15595 PF13360 PQQ-like domain JCR16_RS15595 PF01011 PQQ enzyme repeat JCR16_RS15610 PF13737 Transposase DDE domain JCR16_RS15625 PF02567 Phenazine biosynthesis-like protein JCR16_RS15660 PF10544 T5orf172 domain JCR16_RS15665 PF13614 AAA domain JCR16_RS15685 PF00905 Penicillin binding protein transpeptidase domain JCR16_RS15695 PF01613 Flavin reductase like domain JCR16_RS15700 PF01717 Cobalamin-independent synthase, Catalytic domain JCR16_RS15700 PF08267 Cobalamin-independent synthase, N-terminal domain JCR16_RS15710 PF03466 LysR substrate binding domain JCR16_RS15710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR16_RS15715 PF01810 LysE type translocator JCR16_RS15725 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JCR16_RS15725 PF12833 Helix-turn-helix domain JCR16_RS15730 PF07687 Peptidase dimerisation domain JCR16_RS15730 PF01546 Peptidase family M20/M25/M40 JCR16_RS15740 PF03466 LysR substrate binding domain JCR16_RS15740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR16_RS15745 PF07690 Major Facilitator Superfamily JCR16_RS15755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR16_RS15755 PF03466 LysR substrate binding domain JCR16_RS15760 PF00890 FAD binding domain JCR16_RS15760 PF14537 Cytochrome c3 JCR16_RS15770 PF02515 CoA-transferase family III JCR16_RS15775 PF07690 Major Facilitator Superfamily JCR16_RS15780 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR16_RS15780 PF02770 Acyl-CoA dehydrogenase, middle domain JCR16_RS15780 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR16_RS15785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR16_RS15785 PF03466 LysR substrate binding domain JCR16_RS15790 PF08240 Alcohol dehydrogenase GroES-like domain JCR16_RS15790 PF00107 Zinc-binding dehydrogenase JCR16_RS15795 PF00962 Adenosine/AMP deaminase JCR16_RS15820 PF02445 Quinolinate synthetase A protein JCR16_RS15825 PF01960 ArgJ family JCR16_RS15830 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JCR16_RS15830 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JCR16_RS15835 PF00893 Small Multidrug Resistance protein JCR16_RS15845 PF05275 Copper resistance protein B precursor (CopB) JCR16_RS15850 PF07732 Multicopper oxidase JCR16_RS15850 PF00394 Multicopper oxidase JCR16_RS15850 PF07731 Multicopper oxidase JCR16_RS15865 PF00834 Ribulose-phosphate 3 epimerase family JCR16_RS15875 PF00756 Putative esterase JCR16_RS15885 PF04445 Putative SAM-dependent methyltransferase JCR16_RS15890 PF00814 Glycoprotease family JCR16_RS15895 PF00132 Bacterial transferase hexapeptide (six repeats) JCR16_RS15900 PF00293 NUDIX domain JCR16_RS15940 PF00425 chorismate binding enzyme JCR16_RS15940 PF04715 Anthranilate synthase component I, N terminal region JCR16_RS15945 PF00155 Aminotransferase class I and II JCR16_RS15950 PF00815 Histidinol dehydrogenase JCR16_RS15955 PF01634 ATP phosphoribosyltransferase JCR16_RS15960 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JCR16_RS15965 PF01722 BolA-like protein JCR16_RS15970 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JCR16_RS15975 PF04963 Sigma-54 factor, core binding domain JCR16_RS15975 PF04552 Sigma-54, DNA binding domain JCR16_RS15975 PF00309 Sigma-54 factor, Activator interacting domain (AID) JCR16_RS16020 PF00795 Carbon-nitrogen hydrolase JCR16_RS16030 PF01047 MarR family JCR16_RS16035 PF02566 OsmC-like protein JCR16_RS16040 PF00437 Type II/IV secretion system protein JCR16_RS16060 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JCR16_RS16060 PF01367 5'-3' exonuclease, C-terminal SAM fold JCR16_RS16060 PF00476 DNA polymerase family A JCR16_RS16060 PF01612 3'-5' exonuclease JCR16_RS16065 PF02325 YGGT family JCR16_RS16070 PF03807 NADP oxidoreductase coenzyme F420-dependent JCR16_RS16070 PF14748 Pyrroline-5-carboxylate reductase dimerisation JCR16_RS16075 PF01171 PP-loop family JCR16_RS16075 PF09179 TilS substrate binding domain JCR16_RS16075 PF11734 TilS substrate C-terminal domain JCR16_RS16080 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JCR16_RS16085 PF02541 Ppx/GppA phosphatase family JCR16_RS16090 PF00085 Thioredoxin JCR16_RS16095 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JCR16_RS16095 PF07497 Rho termination factor, RNA-binding domain JCR16_RS16095 PF07498 Rho termination factor, N-terminal domain JCR16_RS16110 PF00216 Bacterial DNA-binding protein JCR16_RS16115 PF01588 Putative tRNA binding domain JCR16_RS16115 PF03147 Ferredoxin-fold anticodon binding domain JCR16_RS16115 PF03484 tRNA synthetase B5 domain JCR16_RS16115 PF03483 B3/4 domain JCR16_RS16115 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JCR16_RS16120 PF01409 tRNA synthetases class II core domain (F) JCR16_RS16120 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JCR16_RS16140 PF00453 Ribosomal protein L20 JCR16_RS16145 PF01632 Ribosomal protein L35 JCR16_RS16150 PF07690 Major Facilitator Superfamily JCR16_RS16155 PF09335 SNARE associated Golgi protein JCR16_RS16160 PF02798 Glutathione S-transferase, N-terminal domain JCR16_RS16160 PF00043 Glutathione S-transferase, C-terminal domain JCR16_RS16165 PF05198 Translation initiation factor IF-3, N-terminal domain JCR16_RS16165 PF00707 Translation initiation factor IF-3, C-terminal domain JCR16_RS16170 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JCR16_RS16170 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JCR16_RS16170 PF03129 Anticodon binding domain JCR16_RS16170 PF02824 TGS domain JCR16_RS16175 PF00501 AMP-binding enzyme JCR16_RS16175 PF13193 AMP-binding enzyme C-terminal domain JCR16_RS16180 PF04751 Protein of unknown function (DUF615) JCR16_RS16185 PF00381 PTS HPr component phosphorylation site JCR16_RS16190 PF03668 P-loop ATPase protein family JCR16_RS16195 PF02569 Pantoate-beta-alanine ligase JCR16_RS16200 PF02548 Ketopantoate hydroxymethyltransferase JCR16_RS16205 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JCR16_RS16210 PF12626 Polymerase A arginine-rich C-terminus JCR16_RS16210 PF12627 Probable RNA and SrmB- binding site of polymerase A JCR16_RS16210 PF01743 Poly A polymerase head domain JCR16_RS16220 PF03819 MazG nucleotide pyrophosphohydrolase domain JCR16_RS16230 PF04607 Region found in RelA / SpoT proteins JCR16_RS16230 PF13291 ACT domain JCR16_RS16230 PF02824 TGS domain JCR16_RS16235 PF05958 tRNA (Uracil-5-)-methyltransferase JCR16_RS16245 PF00291 Pyridoxal-phosphate dependent enzyme JCR16_RS16250 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JCR16_RS16250 PF00072 Response regulator receiver domain JCR16_RS16250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR16_RS16250 PF00512 His Kinase A (phospho-acceptor) domain JCR16_RS16250 PF01627 Hpt domain JCR16_RS16250 PF00672 HAMP domain JCR16_RS16255 PF00378 Enoyl-CoA hydratase/isomerase JCR16_RS16260 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JCR16_RS16260 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JCR16_RS16265 PF01261 Xylose isomerase-like TIM barrel JCR16_RS16275 PF00106 short chain dehydrogenase JCR16_RS16280 PF02233 NAD(P) transhydrogenase beta subunit JCR16_RS16285 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch JCR16_RS16290 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JCR16_RS16290 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JCR16_RS16295 PF00892 EamA-like transporter family JCR16_RS16305 PF07690 Major Facilitator Superfamily JCR16_RS16310 PF01207 Dihydrouridine synthase (Dus) JCR16_RS16320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR16_RS16320 PF03466 LysR substrate binding domain JCR16_RS16330 PF00899 ThiF family JCR16_RS16340 PF00330 Aconitase family (aconitate hydratase) JCR16_RS16340 PF00694 Aconitase C-terminal domain JCR16_RS16345 PF01026 TatD related DNase JCR16_RS16360 PF00009 Elongation factor Tu GTP binding domain JCR16_RS16360 PF03144 Elongation factor Tu domain 2 JCR16_RS16360 PF16658 Class II release factor RF3, C-terminal domain JCR16_RS16380 PF00563 EAL domain JCR16_RS16380 PF00990 Diguanylate cyclase, GGDEF domain JCR16_RS16380 PF03707 Bacterial signalling protein N terminal repeat JCR16_RS16385 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain JCR16_RS16385 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain JCR16_RS16390 PF10369 Small subunit of acetolactate synthase JCR16_RS16395 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JCR16_RS16395 PF00205 Thiamine pyrophosphate enzyme, central domain JCR16_RS16395 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JCR16_RS16405 PF08264 Anticodon-binding domain of tRNA JCR16_RS16405 PF00133 tRNA synthetases class I (I, L, M and V) JCR16_RS16405 PF13603 Leucyl-tRNA synthetase, Domain 2 JCR16_RS16405 PF09334 tRNA synthetases class I (M) JCR16_RS16420 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JCR16_RS16425 PF00005 ABC transporter JCR16_RS16425 PF02687 FtsX-like permease family JCR16_RS16425 PF12704 MacB-like periplasmic core domain JCR16_RS16430 PF02321 Outer membrane efflux protein JCR16_RS16445 PF00929 Exonuclease JCR16_RS16450 PF03193 RsgA GTPase JCR16_RS16460 PF00462 Glutaredoxin JCR16_RS16465 PF02556 Preprotein translocase subunit SecB JCR16_RS16480 PF00109 Beta-ketoacyl synthase, N-terminal domain JCR16_RS16480 PF02801 Beta-ketoacyl synthase, C-terminal domain JCR16_RS16495 PF00109 Beta-ketoacyl synthase, N-terminal domain JCR16_RS16495 PF02801 Beta-ketoacyl synthase, C-terminal domain JCR16_RS16505 PF04820 Tryptophan halogenase JCR16_RS16525 PF00221 Aromatic amino acid lyase JCR16_RS16540 PF00501 AMP-binding enzyme JCR16_RS16540 PF13193 AMP-binding enzyme C-terminal domain JCR16_RS16550 PF00550 Phosphopantetheine attachment site JCR16_RS16555 PF00550 Phosphopantetheine attachment site JCR16_RS16570 PF01926 50S ribosome-binding GTPase JCR16_RS16570 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JCR16_RS16575 PF13360 PQQ-like domain JCR16_RS16585 PF03129 Anticodon binding domain JCR16_RS16585 PF13393 Histidyl-tRNA synthetase JCR16_RS16590 PF04551 GcpE protein JCR16_RS16595 PF13464 Domain of unknown function (DUF4115) JCR16_RS16605 PF04055 Radical SAM superfamily JCR16_RS16610 PF00334 Nucleoside diphosphate kinase JCR16_RS16615 PF04384 Iron-sulphur cluster assembly JCR16_RS16620 PF01569 PAP2 superfamily JCR16_RS16625 PF00534 Glycosyl transferases group 1 JCR16_RS16625 PF13439 Glycosyltransferase Family 4 JCR16_RS16630 PF03572 Peptidase family S41 JCR16_RS16630 PF17804 Tail specific protease N-terminal domain JCR16_RS16630 PF00595 PDZ domain JCR16_RS16630 PF11818 C-terminal domain of tail specific protease (DUF3340) JCR16_RS16635 PF00933 Glycosyl hydrolase family 3 N terminal domain JCR16_RS16645 PF00561 alpha/beta hydrolase fold JCR16_RS16650 PF00171 Aldehyde dehydrogenase family JCR16_RS16655 PF00171 Aldehyde dehydrogenase family JCR16_RS16660 PF01202 Shikimate kinase JCR16_RS16665 PF02447 GntP family permease JCR16_RS16670 PF01081 KDPG and KHG aldolase JCR16_RS16675 PF00920 Dehydratase family JCR16_RS16685 PF00871 Acetokinase family JCR16_RS16690 PF07085 DRTGG domain JCR16_RS16690 PF01515 Phosphate acetyl/butaryl transferase JCR16_RS16695 PF05681 Fumarate hydratase (Fumerase) JCR16_RS16695 PF05683 Fumarase C-terminus JCR16_RS16710 PF07724 AAA domain (Cdc48 subfamily) JCR16_RS16710 PF10431 C-terminal, D2-small domain, of ClpB protein JCR16_RS16710 PF06689 ClpX C4-type zinc finger JCR16_RS16715 PF00574 Clp protease JCR16_RS16720 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JCR16_RS16720 PF05697 Bacterial trigger factor protein (TF) JCR16_RS16720 PF05698 Bacterial trigger factor protein (TF) C-terminus JCR16_RS16725 PF00593 TonB dependent receptor JCR16_RS16725 PF07715 TonB-dependent Receptor Plug Domain JCR16_RS16730 PF13640 2OG-Fe(II) oxygenase superfamily JCR16_RS16730 PF18331 PKHD-type hydroxylase C-terminal domain JCR16_RS16735 PF08502 LeuA allosteric (dimerisation) domain JCR16_RS16735 PF00682 HMGL-like JCR16_RS16740 PF00561 alpha/beta hydrolase fold JCR16_RS16745 PF07021 Methionine biosynthesis protein MetW JCR16_RS16745 PF00561 alpha/beta hydrolase fold JCR16_RS16755 PF01725 Ham1 family JCR16_RS16765 PF02416 mttA/Hcf106 family JCR16_RS16770 PF02416 mttA/Hcf106 family JCR16_RS16775 PF00902 Sec-independent protein translocase protein (TatC) JCR16_RS16795 PF01790 Prolipoprotein diacylglyceryl transferase JCR16_RS16810 PF00303 Thymidylate synthase JCR16_RS16815 PF00186 Dihydrofolate reductase JCR16_RS16825 PF01625 Peptide methionine sulfoxide reductase JCR16_RS16835 PF01618 MotA/TolQ/ExbB proton channel family JCR16_RS16845 PF00551 Formyl transferase JCR16_RS16845 PF01842 ACT domain JCR16_RS16855 PF00171 Aldehyde dehydrogenase family JCR16_RS16860 PF00830 Ribosomal L28 family JCR16_RS16865 PF00471 Ribosomal protein L33 JCR16_RS16870 PF00999 Sodium/hydrogen exchanger family JCR16_RS16870 PF02254 TrkA-N domain JCR16_RS16890 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) JCR16_RS16895 PF00580 UvrD/REP helicase N-terminal domain JCR16_RS16895 PF13361 UvrD-like helicase C-terminal domain JCR16_RS16910 PF01396 Topoisomerase DNA binding C4 zinc finger JCR16_RS16910 PF01751 Toprim domain JCR16_RS16910 PF01131 DNA topoisomerase JCR16_RS16910 PF08272 Topoisomerase I zinc-ribbon-like JCR16_RS16920 PF01638 HxlR-like helix-turn-helix JCR16_RS16925 PF08240 Alcohol dehydrogenase GroES-like domain JCR16_RS16925 PF00107 Zinc-binding dehydrogenase JCR16_RS16930 PF04102 SlyX JCR16_RS16935 PF00005 ABC transporter JCR16_RS16935 PF12848 ABC transporter JCR16_RS16935 PF16326 ABC transporter C-terminal domain JCR16_RS16940 PF01810 LysE type translocator JCR16_RS16945 PF03279 Bacterial lipid A biosynthesis acyltransferase JCR16_RS16955 PF00375 Sodium:dicarboxylate symporter family JCR16_RS16965 PF02774 Semialdehyde dehydrogenase, dimerisation domain JCR16_RS16965 PF01118 Semialdehyde dehydrogenase, NAD binding domain JCR16_RS16985 PF01416 tRNA pseudouridine synthase JCR16_RS16995 PF01176 Translation initiation factor 1A / IF-1 JCR16_RS17010 PF00180 Isocitrate/isopropylmalate dehydrogenase JCR16_RS17020 PF00694 Aconitase C-terminal domain JCR16_RS17025 PF00330 Aconitase family (aconitate hydratase) JCR16_RS17035 PF03466 LysR substrate binding domain JCR16_RS17035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR16_RS17055 PF00905 Penicillin binding protein transpeptidase domain JCR16_RS17075 PF13614 AAA domain JCR16_RS17080 PF10544 T5orf172 domain JCR16_RS17105 PF00293 NUDIX domain JCR16_RS17110 PF01590 GAF domain JCR16_RS17110 PF05524 PEP-utilising enzyme, N-terminal JCR16_RS17110 PF02896 PEP-utilising enzyme, TIM barrel domain JCR16_RS17110 PF00391 PEP-utilising enzyme, mobile domain JCR16_RS17115 PF00141 Peroxidase JCR16_RS17120 PF12706 Beta-lactamase superfamily domain JCR16_RS17125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR16_RS17125 PF03466 LysR substrate binding domain JCR16_RS17135 PF02798 Glutathione S-transferase, N-terminal domain JCR16_RS17140 PF13280 WYL domain JCR16_RS17140 PF08279 HTH domain JCR16_RS17145 PF13419 Haloacid dehalogenase-like hydrolase JCR16_RS17150 PF00849 RNA pseudouridylate synthase JCR16_RS17150 PF01479 S4 domain JCR16_RS17155 PF12111 Polyribonucleotide phosphorylase C terminal JCR16_RS17155 PF10150 Ribonuclease E/G family JCR16_RS17155 PF00575 S1 RNA binding domain JCR16_RS17160 PF00501 AMP-binding enzyme JCR16_RS17160 PF13193 AMP-binding enzyme C-terminal domain JCR16_RS17175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCR16_RS17175 PF03466 LysR substrate binding domain JCR16_RS17180 PF00106 short chain dehydrogenase JCR16_RS17185 PF04055 Radical SAM superfamily JCR16_RS17185 PF06969 HemN C-terminal domain JCR16_RS17195 PF01554 MatE JCR16_RS17200 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR16_RS17200 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JCR16_RS17200 PF02770 Acyl-CoA dehydrogenase, middle domain JCR16_RS17205 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JCR16_RS17205 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR16_RS17210 PF03109 ABC1 family JCR16_RS17215 PF01197 Ribosomal protein L31 JCR16_RS17230 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JCR16_RS17250 PF03884 DNA gyrase inhibitor YacG JCR16_RS17255 PF00753 Metallo-beta-lactamase superfamily JCR16_RS17260 PF00762 Ferrochelatase JCR16_RS17270 PF01177 Asp/Glu/Hydantoin racemase JCR16_RS17285 PF01206 Sulfurtransferase TusA JCR16_RS17290 PF03471 Transporter associated domain JCR16_RS17290 PF00571 CBS domain JCR16_RS17295 PF00795 Carbon-nitrogen hydrolase JCR16_RS17300 PF01588 Putative tRNA binding domain JCR16_RS17310 PF07963 Prokaryotic N-terminal methylation motif JCR16_RS17310 PF08334 Type II secretion system (T2SS), protein G JCR16_RS17315 PF00482 Type II secretion system (T2SS), protein F JCR16_RS17320 PF17764 3′ DNA-binding domain (3′BD) JCR16_RS17320 PF00271 Helicase conserved C-terminal domain JCR16_RS17320 PF18074 Primosomal protein N C-terminal domain JCR16_RS17320 PF00270 DEAD/DEAH box helicase JCR16_RS17320 PF18319 PriA DNA helicase Cys-rich region (CRR) domain JCR16_RS17325 PF00999 Sodium/hydrogen exchanger family JCR16_RS17325 PF02254 TrkA-N domain JCR16_RS17330 PF01430 Hsp33 protein JCR16_RS17340 PF00226 DnaJ domain JCR16_RS17340 PF01556 DnaJ C terminal domain JCR16_RS17350 PF01544 CorA-like Mg2+ transporter protein JCR16_RS17355 PF00575 S1 RNA binding domain JCR16_RS17355 PF03725 3' exoribonuclease family, domain 2 JCR16_RS17355 PF01138 3' exoribonuclease family, domain 1 JCR16_RS17355 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JCR16_RS17355 PF00013 KH domain JCR16_RS17360 PF00312 Ribosomal protein S15 JCR16_RS17365 PF00144 Beta-lactamase JCR16_RS17370 PF13538 UvrD-like helicase C-terminal domain JCR16_RS17375 PF00580 UvrD/REP helicase N-terminal domain JCR16_RS17375 PF12705 PD-(D/E)XK nuclease superfamily JCR16_RS17375 PF13361 UvrD-like helicase C-terminal domain JCR16_RS17380 PF17946 RecC C-terminal domain JCR16_RS17390 PF03976 Polyphosphate kinase 2 (PPK2) JCR16_RS17400 PF01209 ubiE/COQ5 methyltransferase family JCR16_RS17410 PF03109 ABC1 family JCR16_RS17415 PF01494 FAD binding domain JCR16_RS17420 PF01502 Phosphoribosyl-AMP cyclohydrolase JCR16_RS17435 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter JCR16_RS17435 PF13244 Domain of unknown function (DUF4040) JCR16_RS17435 PF00361 Proton-conducting membrane transporter JCR16_RS17435 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JCR16_RS17440 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JCR16_RS17445 PF00361 Proton-conducting membrane transporter JCR16_RS17450 PF01899 Na+/H+ ion antiporter subunit JCR16_RS17455 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) JCR16_RS17460 PF03334 Na+/H+ antiporter subunit JCR16_RS17465 PF02033 Ribosome-binding factor A JCR16_RS17470 PF08364 Bacterial translation initiation factor IF-2 associated region JCR16_RS17470 PF04760 Translation initiation factor IF-2, N-terminal region JCR16_RS17470 PF11987 Translation-initiation factor 2 JCR16_RS17470 PF00009 Elongation factor Tu GTP binding domain JCR16_RS17475 PF00575 S1 RNA binding domain JCR16_RS17475 PF13184 NusA-like KH domain JCR16_RS17475 PF08529 NusA N-terminal domain JCR16_RS17480 PF17384 RimP C-terminal SH3 domain JCR16_RS17480 PF02576 RimP N-terminal domain JCR16_RS17500 PF03840 Preprotein translocase SecG subunit JCR16_RS17505 PF00121 Triosephosphate isomerase JCR16_RS17510 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JCR16_RS17510 PF00437 Type II/IV secretion system protein JCR16_RS17515 PF00482 Type II secretion system (T2SS), protein F JCR16_RS17520 PF01478 Type IV leader peptidase family JCR16_RS17520 PF06750 Bacterial Peptidase A24 N-terminal domain JCR16_RS17525 PF01121 Dephospho-CoA kinase JCR16_RS17535 PF08032 RNA 2'-O ribose methyltransferase substrate binding JCR16_RS17535 PF00588 SpoU rRNA Methylase family JCR16_RS17540 PF06865 Pyrimidine/purine nucleoside phosphorylase JCR16_RS17550 PF02463 RecF/RecN/SMC N terminal domain JCR16_RS17555 PF02622 Uncharacterized ACR, COG1678 JCR16_RS17560 PF03652 Holliday junction resolvase JCR16_RS17565 PF13533 Biotin-lipoyl like JCR16_RS17590 PF02805 Metal binding domain of Ada JCR16_RS17590 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JCR16_RS17590 PF12833 Helix-turn-helix domain JCR16_RS17590 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JCR16_RS17595 PF01066 CDP-alcohol phosphatidyltransferase JCR16_RS17605 PF02151 UvrB/uvrC motif JCR16_RS17605 PF08459 UvrC Helix-hairpin-helix N-terminal JCR16_RS17605 PF01541 GIY-YIG catalytic domain JCR16_RS17625 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JCR16_RS17625 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JCR16_RS17625 PF00378 Enoyl-CoA hydratase/isomerase JCR16_RS17630 PF02803 Thiolase, C-terminal domain JCR16_RS17630 PF00108 Thiolase, N-terminal domain JCR16_RS17650 PF00376 MerR family regulatory protein JCR16_RS17650 PF09278 MerR, DNA binding JCR16_RS17660 PF01323 DSBA-like thioredoxin domain JCR16_RS17675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR16_RS17675 PF00183 Hsp90 protein JCR16_RS17690 PF03553 Na+/H+ antiporter family JCR16_RS17690 PF13726 Na+-H+ antiporter family JCR16_RS17695 PF00561 alpha/beta hydrolase fold JCR16_RS17715 PF04983 RNA polymerase Rpb1, domain 3 JCR16_RS17715 PF00623 RNA polymerase Rpb1, domain 2 JCR16_RS17715 PF04998 RNA polymerase Rpb1, domain 5 JCR16_RS17715 PF05000 RNA polymerase Rpb1, domain 4 JCR16_RS17715 PF04997 RNA polymerase Rpb1, domain 1 JCR16_RS17720 PF04561 RNA polymerase Rpb2, domain 2 JCR16_RS17720 PF04565 RNA polymerase Rpb2, domain 3 JCR16_RS17720 PF00562 RNA polymerase Rpb2, domain 6 JCR16_RS17720 PF04560 RNA polymerase Rpb2, domain 7 JCR16_RS17720 PF10385 RNA polymerase beta subunit external 1 domain JCR16_RS17720 PF04563 RNA polymerase beta subunit JCR16_RS17725 PF16320 Ribosomal protein L7/L12 dimerisation domain JCR16_RS17725 PF00542 Ribosomal protein L7/L12 C-terminal domain JCR16_RS17730 PF00466 Ribosomal protein L10 JCR16_RS17735 PF00687 Ribosomal protein L1p/L10e family JCR16_RS17740 PF00298 Ribosomal protein L11, RNA binding domain JCR16_RS17740 PF03946 Ribosomal protein L11, N-terminal domain JCR16_RS17745 PF00467 KOW motif JCR16_RS17745 PF02357 Transcription termination factor nusG JCR16_RS17750 PF00584 SecE/Sec61-gamma subunits of protein translocation complex JCR16_RS17760 PF00009 Elongation factor Tu GTP binding domain JCR16_RS17760 PF03144 Elongation factor Tu domain 2 JCR16_RS17760 PF03143 Elongation factor Tu C-terminal domain JCR16_RS17785 PF00425 chorismate binding enzyme JCR16_RS17785 PF04715 Anthranilate synthase component I, N terminal region JCR16_RS17790 PF13419 Haloacid dehalogenase-like hydrolase JCR16_RS17795 PF00498 FHA domain JCR16_RS17795 PF12401 Protein of unknown function (DUF2662) JCR16_RS17800 PF00263 Bacterial type II and III secretion system protein JCR16_RS17800 PF03958 Bacterial type II/III secretion system short domain JCR16_RS17815 PF00816 H-NS histone family JCR16_RS17840 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain JCR16_RS17840 PF03900 Porphobilinogen deaminase, C-terminal domain JCR16_RS17845 PF04397 LytTr DNA-binding domain JCR16_RS17845 PF00072 Response regulator receiver domain JCR16_RS17850 PF07694 5TMR of 5TMR-LYT JCR16_RS17850 PF06580 Histidine kinase JCR16_RS17850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR16_RS17855 PF00206 Lyase JCR16_RS17855 PF14698 Argininosuccinate lyase C-terminal JCR16_RS17860 PF04362 Bacterial Fe(2+) trafficking JCR16_RS17865 PF01895 PhoU domain JCR16_RS17870 PF02321 Outer membrane efflux protein JCR16_RS17875 PF00892 EamA-like transporter family JCR16_RS17890 PF13667 ThiC-associated domain JCR16_RS17890 PF01964 Radical SAM ThiC family JCR16_RS17895 PF00293 NUDIX domain JCR16_RS17900 PF00149 Calcineurin-like phosphoesterase JCR16_RS17905 PF01258 Prokaryotic dksA/traR C4-type zinc finger JCR16_RS17910 PF00749 tRNA synthetases class I (E and Q), catalytic domain JCR16_RS17915 PF01098 Cell cycle protein JCR16_RS17920 PF08245 Mur ligase middle domain JCR16_RS17920 PF02875 Mur ligase family, glutamate ligase domain JCR16_RS17930 PF07664 Ferrous iron transport protein B C terminus JCR16_RS17930 PF07670 Nucleoside recognition JCR16_RS17930 PF02421 Ferrous iron transport protein B JCR16_RS17940 PF02899 Phage integrase, N-terminal SAM-like domain JCR16_RS17940 PF00589 Phage integrase family JCR16_RS17945 PF10411 Disulfide bond isomerase protein N-terminus JCR16_RS17945 PF13098 Thioredoxin-like domain JCR16_RS17950 PF00742 Homoserine dehydrogenase JCR16_RS17950 PF01842 ACT domain JCR16_RS17950 PF03447 Homoserine dehydrogenase, NAD binding domain JCR16_RS17955 PF00291 Pyridoxal-phosphate dependent enzyme JCR16_RS17960 PF00768 D-alanyl-D-alanine carboxypeptidase JCR16_RS17965 PF00072 Response regulator receiver domain JCR16_RS17965 PF00196 Bacterial regulatory proteins, luxR family JCR16_RS17970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCR16_RS17970 PF00512 His Kinase A (phospho-acceptor) domain JCR16_RS17975 PF00158 Sigma-54 interaction domain JCR16_RS17975 PF00072 Response regulator receiver domain JCR16_RS17975 PF02954 Bacterial regulatory protein, Fis family JCR16_RS17980 PF03572 Peptidase family S41 JCR16_RS17980 PF00595 PDZ domain JCR16_RS17985 PF01676 Metalloenzyme superfamily JCR16_RS17985 PF06415 BPG-independent PGAM N-terminus (iPGM_N) JCR16_RS17990 PF03739 Lipopolysaccharide export system permease LptF/LptG JCR16_RS18000 PF02789 Cytosol aminopeptidase family, N-terminal domain JCR16_RS18000 PF00883 Cytosol aminopeptidase family, catalytic domain JCR16_RS18020 PF00677 Lumazine binding domain JCR16_RS18030 PF01872 RibD C-terminal domain JCR16_RS18030 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JCR16_RS18035 PF03477 ATP cone domain JCR16_RS18040 PF00909 Ammonium Transporter Family JCR16_RS18045 PF00543 Nitrogen regulatory protein P-II JCR16_RS18055 PF13335 Magnesium chelatase, subunit ChlI C-terminal JCR16_RS18055 PF01078 Magnesium chelatase, subunit ChlI JCR16_RS18065 PF00916 Sulfate permease family JCR16_RS18065 PF01740 STAS domain JCR16_RS18070 PF00582 Universal stress protein family JCR16_RS18090 PF00665 Integrase core domain JCR16_RS18100 PF13335 Magnesium chelatase, subunit ChlI C-terminal JCR16_RS18100 PF01078 Magnesium chelatase, subunit ChlI JCR16_RS18105 PF00155 Aminotransferase class I and II JCR16_RS18105 PF00392 Bacterial regulatory proteins, gntR family JCR16_RS18115 PF00701 Dihydrodipicolinate synthetase family JCR16_RS18125 PF03573 outer membrane porin, OprD family JCR16_RS18130 PF00719 Inorganic pyrophosphatase JCR16_RS18145 PF00501 AMP-binding enzyme JCR16_RS18145 PF13193 AMP-binding enzyme C-terminal domain JCR16_RS18150 PF03989 DNA gyrase C-terminal domain, beta-propeller JCR16_RS18150 PF00521 DNA gyrase/topoisomerase IV, subunit A JCR16_RS18155 PF07690 Major Facilitator Superfamily JCR16_RS18160 PF03458 UPF0126 domain JCR16_RS18165 PF02810 SEC-C motif JCR16_RS18170 PF03741 Integral membrane protein TerC family JCR16_RS18170 PF03471 Transporter associated domain JCR16_RS18175 PF03641 Possible lysine decarboxylase JCR16_RS18180 PF07690 Major Facilitator Superfamily JCR16_RS18190 PF11799 impB/mucB/samB family C-terminal domain JCR16_RS18190 PF00817 impB/mucB/samB family JCR16_RS18190 PF11798 IMS family HHH motif JCR16_RS18205 PF11842 Domain of unknown function (DUF3362) JCR16_RS18205 PF04055 Radical SAM superfamily JCR16_RS18205 PF08497 Radical SAM N-terminal JCR16_RS18225 PF03358 NADPH-dependent FMN reductase JCR16_RS18235 PF00291 Pyridoxal-phosphate dependent enzyme JCR16_RS18270 PF00440 Bacterial regulatory proteins, tetR family JCR16_RS18295 PF01327 Polypeptide deformylase JCR16_RS18305 PF17782 DprA winged helix domain JCR16_RS18305 PF02481 DNA recombination-mediator protein A JCR16_RS18310 PF01300 Telomere recombination JCR16_RS18315 PF00892 EamA-like transporter family JCR16_RS18320 PF00440 Bacterial regulatory proteins, tetR family JCR16_RS18325 PF07690 Major Facilitator Superfamily JCR16_RS18335 PF00255 Glutathione peroxidase JCR16_RS18345 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JCR16_RS18350 PF02874 ATP synthase alpha/beta family, beta-barrel domain JCR16_RS18350 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JCR16_RS18355 PF00231 ATP synthase JCR16_RS18360 PF00306 ATP synthase alpha/beta chain, C terminal domain JCR16_RS18360 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JCR16_RS18360 PF02874 ATP synthase alpha/beta family, beta-barrel domain JCR16_RS18365 PF00213 ATP synthase delta (OSCP) subunit JCR16_RS18370 PF00430 ATP synthase B/B' CF(0) JCR16_RS18375 PF00137 ATP synthase subunit C JCR16_RS18380 PF00119 ATP synthase A chain JCR16_RS18400 PF00005 ABC transporter JCR16_RS18405 PF00950 ABC 3 transport family JCR16_RS18410 PF01810 LysE type translocator JCR16_RS18415 PF04261 Dyp-type peroxidase family JCR16_RS18420 PF03949 Malic enzyme, NAD binding domain JCR16_RS18420 PF00390 Malic enzyme, N-terminal domain JCR16_RS18425 PF05746 DALR anticodon binding domain JCR16_RS18425 PF03485 Arginyl tRNA synthetase N terminal domain JCR16_RS18425 PF00750 tRNA synthetases class I (R) JCR16_RS18445 PF02678 Pirin JCR16_RS18445 PF05726 Pirin C-terminal cupin domain JCR16_RS18455 PF03551 Transcriptional regulator PadR-like family JCR16_RS18460 PF13427 Domain of unknown function (DUF4111) JCR16_RS18460 PF01909 Nucleotidyltransferase domain JCR16_RS18465 PF00117 Glutamine amidotransferase class-I JCR16_RS18465 PF00958 GMP synthase C terminal domain JCR16_RS18465 PF02540 NAD synthase JCR16_RS18470 PF04286 Protein of unknown function (DUF445) JCR16_RS18475 PF07681 DoxX JCR16_RS18480 PF09335 SNARE associated Golgi protein JCR16_RS18495 PF13614 AAA domain JCR16_RS18505 PF01722 BolA-like protein JCR16_RS18520 PF01648 4'-phosphopantetheinyl transferase superfamily JCR16_RS18525 PF16363 GDP-mannose 4,6 dehydratase JCR16_RS18540 PF00501 AMP-binding enzyme JCR16_RS18540 PF13193 AMP-binding enzyme C-terminal domain JCR16_RS18540 PF00668 Condensation domain JCR16_RS18540 PF00550 Phosphopantetheine attachment site JCR16_RS18540 PF00975 Thioesterase domain JCR16_RS18545 PF00550 Phosphopantetheine attachment site JCR16_RS18545 PF08242 Methyltransferase domain JCR16_RS18545 PF14765 Polyketide synthase dehydratase JCR16_RS18545 PF00975 Thioesterase domain JCR16_RS18545 PF02801 Beta-ketoacyl synthase, C-terminal domain JCR16_RS18545 PF00109 Beta-ketoacyl synthase, N-terminal domain JCR16_RS18545 PF16197 Ketoacyl-synthetase C-terminal extension JCR16_RS18550 PF02770 Acyl-CoA dehydrogenase, middle domain JCR16_RS18550 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR16_RS18550 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR16_RS18555 PF00501 AMP-binding enzyme JCR16_RS18560 PF13737 Transposase DDE domain JCR16_RS18565 PF03472 Autoinducer binding domain JCR16_RS18565 PF00196 Bacterial regulatory proteins, luxR family JCR16_RS18575 PF00765 Autoinducer synthase JCR16_RS18580 PF07690 Major Facilitator Superfamily JCR16_RS18580 PF00083 Sugar (and other) transporter JCR16_RS18585 PF00378 Enoyl-CoA hydratase/isomerase JCR16_RS18590 PF00378 Enoyl-CoA hydratase/isomerase JCR16_RS18595 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCR16_RS18595 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCR16_RS18595 PF02770 Acyl-CoA dehydrogenase, middle domain JCR16_RS18600 PF00501 AMP-binding enzyme JCR16_RS18600 PF13193 AMP-binding enzyme C-terminal domain JCR16_RS18605 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JCR16_RS18605 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JCR16_RS18610 PF00171 Aldehyde dehydrogenase family JCR16_RS18620 PF00324 Amino acid permease JCR16_RS18625 PF00324 Amino acid permease JCR16_RS18630 PF01042 Endoribonuclease L-PSP JCR16_RS18635 PF01168 Alanine racemase, N-terminal domain JCR16_RS18635 PF00842 Alanine racemase, C-terminal domain JCR16_RS18640 PF01266 FAD dependent oxidoreductase JCR16_RS18645 PF01037 Lrp/AsnC ligand binding domain JCR16_RS18655 PF00593 TonB dependent receptor JCR16_RS18655 PF07715 TonB-dependent Receptor Plug Domain JCR16_RS18670 PF00849 RNA pseudouridylate synthase JCR16_RS18695 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) JCR16_RS18695 PF04717 Type VI secretion system, phage-baseplate injector JCR16_RS18695 PF13296 Putative type VI secretion system Rhs element Vgr JCR16_RS18700 PF02801 Beta-ketoacyl synthase, C-terminal domain JCR16_RS18700 PF00109 Beta-ketoacyl synthase, N-terminal domain JCR16_RS18735 PF00694 Aconitase C-terminal domain JCR16_RS18735 PF00330 Aconitase family (aconitate hydratase) JCR16_RS18740 PF00285 Citrate synthase, C-terminal domain JCR16_RS18750 PF07729 FCD domain JCR16_RS18750 PF00392 Bacterial regulatory proteins, gntR family JCR16_RS18760 PF00155 Aminotransferase class I and II JCR16_RS18765 PF09330 D-lactate dehydrogenase, membrane binding JCR16_RS18765 PF01565 FAD binding domain JCR16_RS18770 PF01070 FMN-dependent dehydrogenase JCR16_RS18775 PF00392 Bacterial regulatory proteins, gntR family JCR16_RS18775 PF07729 FCD domain JCR16_RS18780 PF02652 L-lactate permease JCR16_RS18785 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JCR16_RS18785 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JCR16_RS18785 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JCR16_RS18785 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JCR16_RS18790 PF16363 GDP-mannose 4,6 dehydratase JCR16_RS18795 PF00342 Phosphoglucose isomerase JCR16_RS18800 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JCR16_RS18800 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JCR16_RS18800 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JCR16_RS18805 PF00483 Nucleotidyl transferase JCR16_RS18810 PF02397 Bacterial sugar transferase JCR16_RS18815 PF00953 Glycosyl transferase family 4 JCR16_RS18820 PF01370 NAD dependent epimerase/dehydratase family JCR16_RS18825 PF13579 Glycosyl transferase 4-like domain JCR16_RS18830 PF02350 UDP-N-acetylglucosamine 2-epimerase JCR16_RS18835 PF01370 NAD dependent epimerase/dehydratase family JCR16_RS18840 PF08485 Polysaccharide biosynthesis protein C-terminal JCR16_RS18840 PF02719 Polysaccharide biosynthesis protein JCR16_RS18860 PF00132 Bacterial transferase hexapeptide (six repeats) JCR16_RS18870 PF01370 NAD dependent epimerase/dehydratase family JCR16_RS18875 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JCR16_RS18875 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JCR16_RS18875 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JCR16_RS18880 PF10531 SLBB domain JCR16_RS18880 PF18412 Outer-membrane lipoprotein Wza C-terminal domain JCR16_RS18880 PF02563 Polysaccharide biosynthesis/export protein JCR16_RS18885 PF01451 Low molecular weight phosphotyrosine protein phosphatase JCR16_RS18890 PF02706 Chain length determinant protein JCR16_RS18890 PF13614 AAA domain JCR16_RS18890 PF13807 G-rich domain on putative tyrosine kinase JCR16_RS18895 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JCR16_RS18895 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JCR16_RS18900 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JCR16_RS18900 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JCR16_RS18905 PF03023 Lipid II flippase MurJ JCR16_RS18910 PF01510 N-acetylmuramoyl-L-alanine amidase JCR16_RS18915 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain JCR16_RS18915 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain JCR16_RS18930 PF01138 3' exoribonuclease family, domain 1 JCR16_RS18930 PF03725 3' exoribonuclease family, domain 2 JCR16_RS18935 PF00487 Fatty acid desaturase JCR16_RS18940 PF00175 Oxidoreductase NAD-binding domain JCR16_RS18945 PF00440 Bacterial regulatory proteins, tetR family JCR16_RS18950 PF08360 QacR-like protein, C-terminal region JCR16_RS18950 PF00440 Bacterial regulatory proteins, tetR family JCR16_RS18955 PF01323 DSBA-like thioredoxin domain JCR16_RS18965 PF13419 Haloacid dehalogenase-like hydrolase JCR16_RS18970 PF00106 short chain dehydrogenase JCR16_RS18985 PF00696 Amino acid kinase family JCR16_RS18985 PF00583 Acetyltransferase (GNAT) family JCR16_RS18990 PF09084 NMT1/THI5 like JCR16_RS18995 PF09084 NMT1/THI5 like JCR16_RS19000 PF00296 Luciferase-like monooxygenase JCR16_RS19005 PF00528 Binding-protein-dependent transport system inner membrane component JCR16_RS19010 PF00005 ABC transporter JCR16_RS19015 PF00440 Bacterial regulatory proteins, tetR family JCR16_RS19015 PF08362 YcdC-like protein, C-terminal region JCR16_RS19020 PF01048 Phosphorylase superfamily JCR16_RS19030 PF06574 FAD synthetase JCR16_RS19030 PF01687 Riboflavin kinase JCR16_RS19035 PF08264 Anticodon-binding domain of tRNA JCR16_RS19035 PF06827 Zinc finger found in FPG and IleRS JCR16_RS19035 PF00133 tRNA synthetases class I (I, L, M and V) JCR16_RS19040 PF01252 Signal peptidase (SPase) II JCR16_RS19045 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JCR16_RS19085 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JCR16_RS19090 PF07859 alpha/beta hydrolase fold JCR16_RS19115 PF01025 GrpE JCR16_RS19120 PF00012 Hsp70 protein JCR16_RS19140 PF13406 Transglycosylase SLT domain JCR16_RS19145 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain JCR16_RS19145 PF02222 ATP-grasp domain JCR16_RS19150 PF00731 AIR carboxylase JCR16_RS19160 PF08245 Mur ligase middle domain JCR16_RS19160 PF02875 Mur ligase family, glutamate ligase domain JCR16_RS19160 PF01225 Mur ligase family, catalytic domain JCR16_RS19170 PF01569 PAP2 superfamily JCR16_RS19175 PF03741 Integral membrane protein TerC family JCR16_RS19185 PF03738 Glutathionylspermidine synthase preATP-grasp JCR16_RS19190 PF00355 Rieske [2Fe-2S] domain JCR16_RS19195 PF01979 Amidohydrolase family JCR16_RS19200 PF00156 Phosphoribosyl transferase domain JCR16_RS19210 PF10411 Disulfide bond isomerase protein N-terminus JCR16_RS19210 PF13098 Thioredoxin-like domain JCR16_RS19215 PF01545 Cation efflux family JCR16_RS19215 PF16916 Dimerisation domain of Zinc Transporter JCR16_RS19220 PF02583 Metal-sensitive transcriptional repressor JCR16_RS19225 PF10396 GTP-binding protein TrmE N-terminus JCR16_RS19225 PF01926 50S ribosome-binding GTPase JCR16_RS19225 PF12631 MnmE helical domain JCR16_RS19230 PF14849 YidC periplasmic domain JCR16_RS19230 PF02096 60Kd inner membrane protein JCR16_RS19235 PF01809 Putative membrane protein insertion efficiency factor JCR16_RS19260 PF06834 TraU protein JCR16_RS19270 PF06986 Type-1V conjugative transfer system mating pair stabilisation JCR16_RS19285 PF06122 Conjugative relaxosome accessory transposon protein JCR16_RS19305 PF13438 Domain of unknown function (DUF4113) JCR16_RS19305 PF00817 impB/mucB/samB family JCR16_RS19305 PF11799 impB/mucB/samB family C-terminal domain JCR16_RS19395 PF00565 Staphylococcal nuclease homologue JCR16_RS19400 PF00816 H-NS histone family JCR16_RS19460 PF13614 AAA domain JCR16_RS19465 PF17762 HTH domain found in ParB protein JCR16_RS19465 PF02195 ParB-like nuclease domain JCR16_RS19485 PF05816 Toxic anion resistance protein (TelA) JCR16_RS19580 PF00684 DnaJ central domain JCR16_RS19580 PF00226 DnaJ domain JCR16_RS19580 PF01556 DnaJ C terminal domain JCR16_RS19615 PF07057 DNA helicase TraI JCR16_RS19615 PF18272 single-stranded DNA binding TraI N-terminal subdomain JCR16_RS19615 PF08751 TrwC relaxase JCR16_RS19615 PF18340 DNA relaxase TraI 2B/2B-like domain JCR16_RS19655 PF02796 Helix-turn-helix domain of resolvase JCR16_RS19655 PF00239 Resolvase, N terminal domain JCR16_RS19670 PF01464 Transglycosylase SLT domain JCR16_RS19705 PF13098 Thioredoxin-like domain JCR16_RS19705 PF10411 Disulfide bond isomerase protein N-terminus JCR16_RS19765 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JCR16_RS19795 PF00593 TonB dependent receptor JCR16_RS19795 PF07715 TonB-dependent Receptor Plug Domain