        rnpA NONE
        yidD NONE
JCR18_RS19255 NONE
JCR18_RS19260 NONE
JCR18_RS19760 NONE
        yidC NONE
JCR18_RS19265 NONE
        mnmE    4603 ..    4632 + -12.3   -3.1733   GAAAATAATAAAAAA       CTGGATGATGTAG AGTG CTATGTCATCCAG        TACTTTTCTCAGCCG  90 33
JCR18_RS19285 NONE
JCR18_RS19290 NONE
        dmeF NONE
JCR18_RS19295 NONE
JCR18_RS00040 NONE
JCR18_RS19300    6764 ..    6777 +  -8.1  -5.09426   AATGACTTAAAAAAA               GCACC GTTC GGTGC                TTTTTTAAAATTAAA  91 37
JCR18_RS19305    7683 ..    7693 +  -6.8  -3.55481   AGTGAGAATTGATTT                 GCTC GCC GAGC                 TCTTTGACTTTTGCT  65 131
JCR18_RS19800    8421 ..    8433 +  -4.1  -2.55818   AATGCGATAGCCGAT                TGCGT ATC ATGCA                TACATTGCCATTCTT  45 184
JCR18_RS19310 NONE
JCR18_RS19315 NONE
JCR18_RS19320 NONE
JCR18_RS19325 NONE
JCR18_RS19330   10831 ..   10845 +  -2.8   -4.0371   TTGTCCTGAAAATAA               TGGG GTGTCTA CCCA               TTTCTGTACGACATA  55 246
JCR18_RS19340 NONE
JCR18_RS19345 NONE
JCR18_RS00085 NONE
JCR18_RS19350 NONE
JCR18_RS00095 NONE
JCR18_RS19355 NONE
        purE NONE
JCR18_RS00105   19585 ..   19600 +    -9  -6.38655   TAAATTTTCTAAAAA              GCGATC TTCG GATCGC               TTTTTTTTTGTCTTT 100 47
JCR18_RS00110 NONE
JCR18_RS19390   22306 ..   22322 +  -2.3  -5.31519   ATTCATCATTAATCT              GGTTA AAGTGAG TAACC              TTTTTATTTAAGTCT  73 256
JCR18_RS19405 NONE
JCR18_RS19410   24068 ..   24078 +  -5.4  -3.72324   AAATTCTTATTGTTA                 GGAT GTA ATCC                 TTATTCGTCAAAGTG  59 74
JCR18_RS19415 NONE
        traL NONE
JCR18_RS19425 NONE
JCR18_RS19430 NONE
JCR18_RS19435 NONE
JCR18_RS19440   28100 ..   28110 +  -2.6  -3.26948   CAATATATGCAACAG                 TTTA TCT TAAA                 TTAGTGCGTTTATCT  44 51
JCR18_RS19445 NONE
        traV NONE
JCR18_RS00145 NONE
JCR18_RS00150 NONE
JCR18_RS00160 NONE
        traC NONE
JCR18_RS00165 NONE
JCR18_RS19460 NONE
        lepB NONE
        traW NONE
JCR18_RS00170 NONE
JCR18_RS00175 NONE
JCR18_RS00180 NONE
JCR18_RS19475   34364 ..   34415 +  -8.4  -3.99678   TAAGATAAGTTCGGA TTACAGAAATTAGTAAATAAAGAT TGAG ATCTTGGTTTATTAACTTCTGTGA TTTCATTATCACGGT  79 26
        trbC NONE
        traN NONE
JCR18_RS00185 NONE
         rrf NONE
JCR18_RS19490 NONE
JCR18_RS19495 NONE
JCR18_RS00195 NONE
JCR18_RS19500 NONE
JCR18_RS19505   42829 ..   42845 +  -2.3  -3.12351   TCACGTACTGCCAAA              TTTGC TTTCATT GCAAA              TTGAGTATCCGGCAG  43 67
JCR18_RS19510   43808 ..   43839 +  -3.9  -3.40522   AACTCAAGCGGTTGG      GGCTCAAAAATCAT GACCA ATG-TTTTTAAGCC      TTGTGCTGCAGCAAT  51 456
JCR18_RS00225 NONE
JCR18_RS19520 NONE
JCR18_RS00230   45972 ..   45991 + -12.2  -5.79595   TCATTTCTAAAAAAA            GATCGGCA AATT TGCCGATC             TTTTTTATTTTAGCG 100 31
JCR18_RS19535   48082 ..   48096 +  -4.3  -2.67667   AGACTCCGACCGCCA               CCAAA AATAA TTTGG               CTGTTTCATCAATAC  47 398
JCR18_RS19560   51320 ..   51331 +    -3  -4.84359   GTCTTTAATAGACTG                GATT GGAG AATC                 TTTTTGTACCAATAA  68 10
JCR18_RS19565 NONE
JCR18_RS19570 NONE
JCR18_RS19575 NONE
JCR18_RS19580   54994 ..   55012 +  -3.8  -4.49311   AGAGCTGGTAAATAC             GACAGAAG CGT TTTCTGAC             TTTTGTAATAGTGGT  66 107
JCR18_RS19585   55529 ..   55547 +    -6  -3.08046   TTATCATACGCTGAT             TTTCCTGT AGA GCAGGAAG             CTTTTGACGTAACAA  57 114
JCR18_RS19590 NONE
JCR18_RS19595 NONE
JCR18_RS19600   56618 ..   56631 +  -3.9  -2.71055   TGGAATTTGACGATA               TTCAA TATT TTGAA                CATTTTCTTGTTGAG  46 49
JCR18_RS19605 NONE
JCR18_RS19610 NONE
JCR18_RS19615 NONE
JCR18_RS00295 NONE
JCR18_RS19620   58108 ..   58122 +  -4.2  -4.68103   TGCTTCAACTTAGAC               TCTGTC ATC GTCAGA               TTTTCTTCAAGTTGA  69 220
JCR18_RS19625 NONE
JCR18_RS19630   58800 ..   58815 +  -3.3  -3.06133   TTTCGAGTTTAGTCA              GATCT GTTGTG AGATC               TTCAATCAAAAATTC  46 5
JCR18_RS19635 NONE
JCR18_RS19640 NONE
JCR18_RS00310 NONE
JCR18_RS00315 NONE
JCR18_RS19650   61606 ..   61625 +  -8.6  -5.63236   AGATAGACCAATAAA            TAGCTCCT AAAA AGGGGCTA             TTTTTATTTTTAAGT 100 15
JCR18_RS19655 NONE
         rph   62477 ..   62506 + -15.3  -2.56914   TAAGTTTAAGTTTTC       TAAAAAACGCATC TTCG GATGCGTTTTTTA        TGCCTTCATCAAATC 100 38
JCR18_RS19660 NONE
JCR18_RS19670 NONE
JCR18_RS19675 NONE
JCR18_RS00330 NONE
JCR18_RS19680 NONE
        ampD NONE
JCR18_RS19685 NONE
JCR18_RS19690 NONE
        murJ   68727 ..   68744 +    -7  -5.80817   CACTAAAATAAAAAA             GCGATC AATTTA GATCGC              TTTTTTTATCTTCGA 100 35
JCR18_RS19700 NONE
JCR18_RS19705 NONE
JCR18_RS19710 NONE
JCR18_RS19715 NONE
JCR18_RS19720   73168 ..   73178 +    -4  -3.63895   ATATAAATAATATCA                 TTAC TAC GTAA                 TTTAAACTGATTAGC  54 2
JCR18_RS19245   74003 ..   74014 +    -3  -4.77157   GAATTGCCGGTAATG                TTTC TTGA GAAA                 TTTTTACTACGTTAA  65 191
        tviB NONE
        tviC NONE
JCR18_RS00385   78107 ..   78123 +  -3.1  -5.36441   TCAAAAATGAGACTC              TTAAAAA AGT TTTTTAG              TTTTTTCTATAGCCG  74 31
JCR18_RS00390 NONE
JCR18_RS00395 NONE
JCR18_RS00400 NONE
JCR18_RS00405 NONE
JCR18_RS00410 NONE
JCR18_RS00415 NONE
        wecB NONE
JCR18_RS00425 NONE
JCR18_RS00430 NONE
JCR18_RS00435 NONE
JCR18_RS00440 NONE
        galU   90544 ..   90570 +  -8.1  -2.90212   ACAACAGAGCAGTAT         ATTCTCTTCCT GTAAA AGGAAGAGAAA         TCTATAAAATACTAA  68 86
JCR18_RS00450 NONE
         pgi NONE
        galE   94545 ..   94573 +    -9   -4.9445   CTATAACTAAGTAAA        TAAAAAAGGAGC AAATC GCTCCTTTTTCA        TTTTTAATTAGTTCT  95 31
        lldP NONE
        lldR NONE
        lldD  100096 ..  100119 +  -3.8  -2.80511   GATAGTAAATATAGG          GCTGATTCAC ATTA GAGAATGAGC           TAATTAAATTATAAA  47 213
         dld  101926 ..  101939 +  -9.5  -5.64274   CGAGACATAAAAAAA               GGCGC CGAA GCGCC                TTTTTTTATAGATGA 100 44
JCR18_RS00500 NONE
        prpB  105487 ..  105503 +  -8.7  -3.19389   TAAGAAGTGAAAATG              GTACGAC TCC GTCGTGC              TTAATAAATAAATTC  74 239
        prpC NONE
        acnD  109345 ..  109363 +  -6.7  -5.22312   ATTGTTCAAAAAAAG             CCCTATC TTGAT GATGGGG             TTTTTTACTATACAT  88 64
JCR18_RS00520  109754 ..  109772 + -14.6  -4.53047   TATCGTATAAAAAAA             GCCCGACA TCC TGTCGGGC             TTTCTTGTATTTGGT 100 48
JCR18_RS00525  110224 ..  110263 + -18.2  -3.57263   TATTTGCGTTCGCAT  TTAACAAAAAGCCCTGTC ACCC GATGGGGCTTTTTGTTAA   TTTAAAAATAAGACT 100 52
JCR18_RS00530  110934 ..  110952 + -14.6  -4.53047   ATGACCATAAAAAAA             GCCCGACA TCC TGTCGGGC             TTTCTTGTATTTGGT 100 63
JCR18_RS00535 NONE
JCR18_RS00540  112792 ..  112810 + -14.6  -4.53047   TCAGATATAAAAAAA             GCCCGACA TCC TGTCGGGC             TTTCTTGTATTTGGT 100 69
JCR18_RS00550  115905 ..  115917 +  -6.3  -3.02867   TCAAAAAAGAACTGT                CTTGA ATC TCAAG                CTTATTAATTTTTTA  59 141
JCR18_RS00555 NONE
JCR18_RS00560 NONE
JCR18_RS00565  120235 ..  120262 + -12.2  -2.90723   AATTGTAAAAATATA        GAAGAAGCGTAA TTTA TTACGCTTTTTC         TCTCATTAGAAATAG  90 54
JCR18_RS00575  122564 ..  122584 +  -5.3  -3.29511   ATTTCTTTATGATTT            GCCGCCATG CTC CATTGCTGC            TTCTACGACCATGCC  56 106
JCR18_RS00580 NONE
JCR18_RS00585 NONE
JCR18_RS00590  124161 ..  124178 + -11.3  -5.86976   ATGTTTTAGTGAAAA             GCCCGAA ACTA TTCGGGC              TTTTTTATTTTATAG 100 32
JCR18_RS00600  127525 ..  127554 +  -8.7  -3.39142   ATTTTCAAAAGGTGA       GTAAAGCGAGT TCAGTAAT GCTCGCTTTAC        TTGCTTACATCTAAA  76 40
JCR18_RS00610 NONE
         alr NONE
JCR18_RS00620  130998 ..  131043 +  -4.8  -3.01791   TTTTGGTGAACAGAT TCAGTGACCTATGGCATA CGGTTCAATT TTCGCCATAGGTTGCTGA TCTTAACAAAGGAAT  52 109
JCR18_RS00625  132530 ..  132549 +  -8.6  -6.17669   AAGTTTTATTAAAAA            GCCAATCG AACA TGATTGGC             TTTTTTTATTTTCTT 100 39
JCR18_RS00630  134343 ..  134360 +  -9.9  -5.52807   TCGATTTACCAGAAA             GCCAATC ATAT GATTGGC              TTTTTATTTATTATT 100 51
JCR18_RS00640 NONE
        mmsB  137849 ..  137861 +  -4.8  -3.54543   AGGCATAACGGTAAA                GCCA AAGGA TGGC                TTTAAACGAATAAAT  56 33
JCR18_RS00650 NONE
JCR18_RS00655 NONE
JCR18_RS00660 NONE
JCR18_RS00665 NONE
JCR18_RS00670  144066 ..  144096 + -12.7  -2.88579   GCTATGTAAAAATTA       GGACTCATGCC CCAATGATA GGCATGAGTCC       TATATAAGAAATTAG 100 76
        abaR  146646 ..  146662 +  -9.5  -3.39556   GATTATAAATAATAG              GCTTTGT TGC ACAAAGC              TGTTCTTAAGGGCTT  80 42
JCR18_RS00690  148127 ..  148144 +  -8.5  -2.80816   ATAAGAGACCACTAA             CCTGTAA ACAC TTACAGG              TGTAATAAGTAACAC  71 521
JCR18_RS00695 NONE
JCR18_RS00700 NONE
JCR18_RS00705  152246 ..  152260 +  -3.5  -3.14463   TCTTGTTTCTGAGTT               GCAGC AGGGA GTTGC               TTCATGAACAACCTT  46 4
JCR18_RS00710 NONE
JCR18_RS00715 NONE
JCR18_RS00720  161202 ..  161215 +  -6.7  -2.97012   TGCTGGAGTGCCCAG               CACCT AATA AGGTG                ATTTATGGATAATTT  61 61
JCR18_RS00725 NONE
JCR18_RS00730  163904 ..  163927 +  -9.6  -4.35524   AGATCAAAAGAAAAA          GGCACTTACC TTTC GATAAGTGCC           TTTTGAATTTGGAGC  91 87
JCR18_RS00745  164669 ..  164680 +    -3  -3.92075   ACATGCACCTAAAAG                CTAA GGGC TTAG                 TTTATGGATGCACAT  52 22
JCR18_RS00750 NONE
JCR18_RS00755 NONE
JCR18_RS00760  166400 ..  166445 +  -7.2  -2.73007   CGAATTAATCATCAG TTT-TGCATCACAATATGCTA ACTAA TTGCATATTGTGATGAATAAA GTTTAGCAAAATGTT  62 33
JCR18_RS00765  167388 ..  167411 +  -5.5  -3.21099   AATGCGCCAATTACG          TTATAAGTT AAGAAA AACTTATAA           TTCATGCTGCCAGCG  54 215
JCR18_RS00775  168500 ..  168520 + -11.2  -5.88197   AAAGCAAAATAAAAA            CCGGATGA TTCAT TCATCCGG            TTTTTTTATATTTAA 100 46
        guaA  171724 ..  171742 + -13.2  -5.46276   ATAATCAAATGAAAA             GGCAGGAT TAA ATCCTGCC             TTTTTTATATCTGTT 100 37
JCR18_RS00790  172622 ..  172637 +    -9  -5.87996   CATACGGCTATATAA              GAGTGC TTAA GCACTC               TTTTTTTATTACTTA 100 81
JCR18_RS00795 NONE
JCR18_RS00800 NONE
JCR18_RS00805 NONE
JCR18_RS00810  175246 ..  175263 +  -9.9  -5.36441   ACAAATGGAATAAAA             CAGCATG TTCA CATGCTG              TTTTTTATGTAAAAA 100 81
JCR18_RS00815  175979 ..  175996 +  -8.5   -5.5604   ATATATAAAAGAAAA             GGAACAA ATAT TTGTTCC              TTTTTTATTGCTTAA 100 33
JCR18_RS00830  180798 ..  180815 + -11.3  -6.09196   ATGAGAATGTGAAAA             GAGGAGC TTAA GCTCCTC              TTTTTTTCTTTTAAG 100 43
JCR18_RS00840  182518 ..  182544 + -11.6  -3.21015   GCTAAGTACGGTCCA         TCAAGCAGCCTG ATT TAGGCCGCTTGA         GTTTGATTTTTGATT  88 13
JCR18_RS00860  185660 ..  185670 +  -3.2  -2.80935   AGATTGCATGTTCAG                 GGGT GTA ACTC                 TATAATGCCTGCGAT  43 115
JCR18_RS00865  186164 ..  186209 +    -4  -4.81083   AATTGAAGATTTTTT GGAGGGTGGCGAGATATCGAC AGTAC GCCGATGT-TCGTTTCCCTTC TTTTTAGTAATTGAC  68 51
        atpB  187126 ..  187151 +  -8.3  -3.01767   AACATTAATGGTATT         GCCTAACTGTC AAAC GATGGTTGGGC          TGAATTTTTTTAATT  70 33
        atpE NONE
JCR18_RS00880 NONE
JCR18_RS00885 NONE
JCR18_RS00890  190141 ..  190152 +  -3.6  -3.62275   GATCAACCTTCGGAA                GCTC GAAA GGGC                 TTTCGAATACTAGGT  52 69
        atpG NONE
        atpD NONE
JCR18_RS00905  192929 ..  192944 + -10.4  -5.84381   TTCGAGATTGAAAAA              GCCACC TTTC GGTGGC               TTTTTTTATTGCTAA 100 48
JCR18_RS00930  197156 ..  197183 +  -3.6  -3.20164   TGCCATGAAAGCTTG        GACATTATTT TAAAAAAT AAATGATGTC         TTAAGTTCAATATCA  48 13
JCR18_RS00935  198544 ..  198569 + -10.6  -6.02914   CCCATCCTTTTTTAT         GCTCAGTTAT CCCTAT ATAACTGAGC          TTTTTTTTGTCTGAA 100 375
JCR18_RS00955 NONE
JCR18_RS00960 NONE
JCR18_RS00965  204793 ..  204808 +  -2.6  -3.16936   GAAGAAATTACTGGG              TTCGTA TGAG TATGAA               GTTTTAATAAGCTTT  43 3
JCR18_RS00970  205095 ..  205119 +  -8.6  -5.59502   CTTAATAGTTGAAAA          TGGAAGTCTG GATAA CGGGCTTCCA          TTTTTTGCTTTTTTA 100 45
JCR18_RS00980  207118 ..  207128 +  -2.6  -4.27316   TAAACGCTCGAGTCA                 TTAA ATT TTAA                 TTTTCGCTTGCAAAG  55 99
JCR18_RS00985 NONE
JCR18_RS00990 NONE
JCR18_RS00995  209362 ..  209413 +  -8.4  -3.99678   TAAGATAAGTTCGGA TTACAGAAATTAGTAAATAAAGAT TGAG ATCTTGGTTTATTAACTTCTGTGA TTTCATTATCACGGT  79 46
JCR18_RS01000  212692 ..  212702 +  -5.4  -3.53761   TTCAATTCAGCCCAG                 TCTG TTA CAGA                 TTTGGAAAACGCTTC  58 144
         rrf  212886 ..  212913 + -16.4  -5.71712   GCTCATTATTCTAAA        CACCCCAATCTC AAAA GAGGTTGGGGTG         TTTTTTTATATCAAG 100 38
JCR18_RS01010 NONE
        cysK  214809 ..  214840 + -13.3  -3.98816   ATAAAATTAACCATA      TAAAAAAGCCCAT GAATAA ATGGGCTTTTTTA       TTTAATCTTAATTTA 100 37
JCR18_RS01035  217400 ..  217416 +  -2.3  -3.15579   CCATAAAGATTTCAT              ATTTTTG AAG CAAAAAC              TTCATACAAGCTTGA  42 104
JCR18_RS01040  218754 ..  218777 + -10.3  -3.83502   TAAATGAGTTCGATC          TGCGGCGGA TTTTAT TCCGCCGTA           TTTAATCTAAGAATA  89 51
JCR18_RS01045  221325 ..  221355 + -14.3  -4.62783   GCTCGTGGATAACGA       TAAAAAAGGCTCT GTTTA AGAGCCTTTTTTA       TTTTTAAAGTGAGTG 100 29
JCR18_RS01050  222223 ..  222252 +  -4.3  -5.87996   TTAAAAGTATAAAAA       ATGAGCAATATCG ATCA TGATCTTGCTCAG        TTTTTTTATTAATTA  87 113
JCR18_RS01080  229022 ..  229039 +  -8.5  -5.63517   AGAAACATCATAAAA             TAGCTCA ACTT TGAGCTA              TTTTTTATTTGAGAA 100 57
JCR18_RS01085 NONE
JCR18_RS01090 NONE
JCR18_RS01095  231686 ..  231700 +  -5.6  -2.78197   ACAATTTGACGCTCA               GGTGAC AGA GTCCCC               CTTGTGTCTGTAACA  52 90
        parC NONE
JCR18_RS01105  235986 ..  235999 +  -9.5  -6.11229   ATGATGAATAAAAAA               GCGCC GTAA GGCGC                TTTTTTTATTTTAAT 100 40
JCR18_RS01115  236879 ..  236904 +  -5.5  -3.50447   TATTCTTGTTGATCG         TGACAATTAAG TTGA CTTGAGTGTCA          TTCTGTCACCATTCA  58 6
         ppa  237610 ..  237631 +  -7.3  -6.02345   GGCTTAATAAAAAAC           CTACCTGTG TGAC CAGAGGTAG            TTTTTTTTATGCTTG 100 82
JCR18_RS01130  240724 ..  240755 + -14.7  -3.84852   TCTAAGTTAGGGTTT      TAAAAAAGCGGGT CAATAA ACCCGCTTTTTTA       TTAGTTTTCTATTTC 100 36
JCR18_RS01145  243958 ..  243978 +  -9.7  -5.08255   CTCTTAATAAAAGAA            CAGCGGACT TAT AATCCGCTG            TTTTATTTTAAGAGT 100 12
JCR18_RS01155 NONE
JCR18_RS01160 NONE
JCR18_RS01165  248075 ..  248102 + -11.5  -3.70919   TTGAAGCACTTAAAA        TAATGATCAGC GAGTTA GCTGATCATTA         TTATTGAGATTTCAG  93 42
        glnK  255521 ..  255534 +  -2.3  -2.52464   GTACAGGTGAAACAG               GACCG GATG CTGTC                TAAATTGGCACAAAG  39 9
JCR18_RS01210  257018 ..  257065 +   -18  -5.74122   TTCTTATATCAAAAA CAGTCTTGTGCTGTGATCAAAGC GAA GCTTTGATCTCGG-ACAGGACTG TTTTTTTGTCTCATA 100 51
        nrdR NONE
        ribD NONE
JCR18_RS01225  260039 ..  260053 +  -2.1  -2.79581   AGATTTGGAGATTGA              GCCATG TTTA CA-GGC               ATTATTGAAAGTTTA  41 65
JCR18_RS01230  260728 ..  260744 +  -5.1  -5.79595   GCCAAAATAAAAAAA              CCGGA CATACGT TCCGG              TTTTTTATTTTAAAA  90 52
        lptF NONE
        lptG  266015 ..  266037 +  -5.7   -3.0634   TAGGAAAAAATAGAG          TCTTCACCGA AAAT TCGGT-AAGA           TATTGCGATGAAATT  57 91
JCR18_RS01265  267597 ..  267609 +  -4.9  -2.75647   CTGAAATGCAAGGTC                GTAAT CTC ATTAC                ATTGTCTGCTTAAGC  50 0
JCR18_RS01270  268888 ..  268900 +  -3.4  -3.39842   GATAGCGTAAAGAGC                GGAA AGTCA TTCC                TAATTTTTTAGCTGC  48 91
        pbpG  273764 ..  273781 +  -9.9  -5.63504   AATTATTTTTAAAAA             CGCTTCT TTTA AGAAGCG              TTTTTTTATGCCATT 100 44
JCR18_RS01315  278876 ..  278890 +  -5.7  -3.19293   AGAAGAAGGAGTACC               CGCAT GAGTG ATGCG               TTACGTATTGCCCTT  59 19
JCR18_RS01320 NONE
JCR18_RS01325  281033 ..  281049 + -10.9  -5.02074   TGTTTCGTATAAAAA              GCCATCA TAT TGATGGC              TTTTTTACGCACTGA 100 54
JCR18_RS01330 NONE
        ftsW  283747 ..  283777 + -15.7  -4.10188   AACCATGAAGCGTTA       TAAAAAGCCCGAT ATCAA ATCGGGCTTTTTA       TTATTTATAGATATG 100 40
JCR18_RS01370 NONE
JCR18_RS01375  291815 ..  291825 +  -2.6  -5.19251   TTTTACTGGCTTGAG                 TTTA AAT TAAA                 TTTTTCTTAGTCTTA  69 52
JCR18_RS01380  293301 ..  293317 +  -4.3  -3.19192   TCATTTTATCCCTGC              GCCATCA TGT TGGAGGC              TTCCCTTGAGTCCGA  52 111
        phoU  294069 ..  294087 +  -9.6  -6.12458   CTGAAATATTTAAAG             GCCTTGTT TCA GACAAGGC             TTTTTTATTTTTTTA 100 49
JCR18_RS01400 NONE
JCR18_RS01405 NONE
        hemC NONE
JCR18_RS01415 NONE
JCR18_RS01420  300647 ..  300666 +  -2.1  -2.50982   GGCTCATAAGGAGGA            CACATGA AGCATC TCCTGTG             GGTTTACTTTTTAAT  39 32
JCR18_RS01425 NONE
JCR18_RS01430 NONE
JCR18_RS01435  302832 ..  302851 +   -10  -5.93252   ATTGTCTCTTAAAAA            GCCAAGCG ATTC TGCTTGGC             TTTTTTATTTTTAAA 100 45
        gspN NONE
JCR18_RS01445 NONE
        gspD NONE
JCR18_RS01455  307736 ..  307754 + -10.3  -5.10154   TGCTTTTACAATCAA             GGCATGC TAAAC GCATGCC             TTTTTAATTTTGAGT 100 49
JCR18_RS01460 NONE
        trpE  310056 ..  310078 + -13.6   -3.1634   TTTTATGAGTTTTTA           GCGGTTTTTT TTT AAAAAACCGC           TTGCATCGTTTGGAA 100 33
JCR18_RS01470 NONE
JCR18_RS01475  310372 ..  310383 +  -4.4  -2.93073   ACCACCATCTCTAAA                CTTC GAGT GAAG                 TGGTTATTACCAACG  49 34
JCR18_RS01480 NONE
JCR18_RS01485  310607 ..  310624 +  -7.7   -4.1964   CAAAGTTTTCAAAAA             GCAGGCT ATAT AGTCTGC              TTTTCAAGTATTAGG  80 68
         tuf  311944 ..  311973 + -13.7  -3.92869   GTGACGAATTACGTC       TCAAGTTGAGAGC TTTG GCTCTCAACTTGC        TTTATAGGTCAGTAG 100 51
JCR18_RS01495 NONE
        secE NONE
        nusG  313131 ..  313147 + -12.3  -3.01208   AATTGGTTGAAAAGC              GCCCGAT TTT ATCGGGC              ATTGTTGTTGTAACA  90 45
        rplK NONE
        rplA  314404 ..  314420 +  -5.2  -3.25604   GGATTAAGCATAAAA              CAGAAA AGTTA TTTCTG              CTTTTGCTTCGGTAG  56 82
        rplJ NONE
        rplL  315627 ..  315652 + -11.9  -4.74504   TCGGCTCCATAAAAT         GGCTGATGGCT CTTG GGTCATCAGCC          TTTTTGCGTTACAAT 100 65
        rpoB  319983 ..  319997 +  -2.8  -5.08824   AAAATGGTGACTAAG               TCGTAA GAC TCACGA               TTTTTTAGGTAAAAA  66 27
        rpoC  324282 ..  324297 + -11.8  -5.24129   AACTTGCATTAAAAA              GGCGCC TTAG GGCGCC               TTTTTTGTGGAAAAA 100 46
JCR18_RS01540  324820 ..  324845 + -10.6  -5.53079   AACTATATTAAAAAA         GAAGCTCTTA TTTCAT TAAGAGCTTC          TTTTTTATCTGTTTT 100 51
JCR18_RS01545  325384 ..  325403 + -12.2  -4.71426   AAGTGAAATGAAAAA            TAAGCGCC TTCA GGCGCTTA             TTTTATTAGTAGAAG 100 45
JCR18_RS01555  326921 ..  326966 +  -2.8  -5.16132   CAAAACTGGTAATTC GGCGATATT-T-TCGGCTTCAT AGAG GTGAATCTGGTAGAATATCGCC TTTTGTTTTGCTCTG  69 60
JCR18_RS01560  328440 ..  328477 + -13.7  -5.69473   AATATTAAATAAAGA   CCTCCTTAGTTTTTATC TAGA GATAATAATTAAGGAGG    TTTTTTTATGGTATA 100 50
JCR18_RS01565  329372 ..  329395 + -10.4  -5.68438   ACCTAGATTCAGGCA          CCTCACATAG CTTT TTATGTGAGG           TTTTTTATTTCATGG 100 74
JCR18_RS01570 NONE
        htpG  331900 ..  331919 +   -10  -5.28176   TTTGCAATAGAAAAA            GCCTCTGA ATTA TCAGGGGC             TTTTTTGTGGATAAA 100 42
JCR18_RS01595  336380 ..  336390 +  -2.6  -3.96999   TTTTAATTTTCTTAA                 TATT TTC AATA                 TCTTTTTGCGTATAA  55 276
JCR18_RS01605  337231 ..  337266 + -14.3  -3.78351   AAATGTTAGAAAATT    GAT-AAAAATCCCCGC ATTGA GCGGGGATTTTTTATC    TTTACTGAAATTTGT 100 24
JCR18_RS01615  338790 ..  338808 + -11.7  -5.82172   AGGTCGATAAAAAAA             TCCCCGC ACATA GCGGGGA             TTTTTTTATCTTGGT 100 31
        lpxO  343660 ..  343673 +  -9.5  -5.79595   GTGTTTTAATGAAAG               CGCCC GAAA GGGCG                TTTTTTGTTTTAAGC 100 32
JCR18_RS01640  345065 ..  345082 +  -5.5  -4.25676   ACGACACACTTTGTC             GGGCTAG TTTC CTATCCC              TTTTCAAATTTAGTT  66 47
        uvrC  346968 ..  346981 +  -5.3  -3.02511   ATTTATAAAATTTTG               CATGA GTAG TCATG                TGTTGAGAAGATGAG  54 17
JCR18_RS01650  347884 ..  347895 +    -3  -3.07113   AAACTGTTACGGTAT                TTAC CTAA GTAA                 TCTACTTTCTCGATT  45 18
        pgsA  348618 ..  348636 +  -8.9   -5.4505   AAAAGATGTTCAAAA             GCCTTTC CTTGA GAAAGGC             TTTTTTATTGGAAAG 100 46
JCR18_RS01660 NONE
JCR18_RS01665  350212 ..  350232 +  -3.9   -3.7732   TTGGGCAAGAAAAAA            GCCCATGAT GGC AACATGAGC            TTATTCCTCTGAGGG  56 55
JCR18_RS01675 NONE
JCR18_RS01680 NONE
JCR18_RS01685  355016 ..  355032 +  -9.5  -5.86976   AAACTCAATAAAAAA              GCATGTT TGA AACATGC              TTTTTTATTTTATGG 100 56
JCR18_RS01705 NONE
JCR18_RS01710  359699 ..  359722 + -10.4  -5.77571   CTATGCCCAAAGAAA          TCCTGTGAAG TTGG CTTTACAGGA           TTTTTATTTTTTGCT 100 66
        rlmB  360489 ..  360504 +  -3.2  -3.02324   CTTTATGAAGCTTGT              CGTCAG CGTT CTGAGG               TATAATTTAGCTGCC  45 5
JCR18_RS01720  361914 ..  361926 +  -9.1  -4.64598   GTTGAATTTTTTGAA                GGGCA GGT TGCCC                TTTTTCAACTACTTC  88 480
JCR18_RS01745  366978 ..  366989 +  -2.2   -4.6265   CAAATAACGAGGATA                GGGT ATGC ACTC                 TTTTGTACTTGTTGT  59 34
        secG  367314 ..  367329 +  -3.3  -4.19238   AACTGGCCAATAATT              GGAAA TAAGAC TTTCC               TTTTGGAATTGAAAG  58 28
JCR18_RS01755 NONE
JCR18_RS01760  367572 ..  367599 +  -2.1  -2.76171   CAGCTCCCGCTACCA        ATTTGATTAAG GTGCAA CTTAATCAAGC         TAATATTGGATAAGT  40 26
JCR18_RS01765  367810 ..  367824 +  -8.5  -5.57396   TTCTGTGCTATATAG               GGGCG ATTAA CGCCC               TTTTTTATTGGTTAT 100 98
        rimP  368460 ..  368477 +  -3.5  -3.29975   ATCGATAAAGCAAAC             TTGATCT ATCA AGATTAA              ATTTATTTAAATTAT  48 8
        nusA NONE
        infB NONE
JCR18_RS01785  373122 ..  373155 + -14.1  -3.18155   GTAATAAAAACTCAA     AATAAAAAAGCCACC TTGG GGTGGCTTTTTTATG      TGTTCAAGTTTTTAT 100 37
JCR18_RS01860  391019 ..  391038 +  -2.2  -5.63236   AAAGCCGCGTTTTCG            TAATTCAT CCCA GTGAATTG             TTTTTGTTTTTGGAT  80 294
JCR18_RS01870 NONE
JCR18_RS01875 NONE
        recD  400861 ..  400890 + -10.1  -5.56264   ACTTACAGCCGCTAA       GCCTTGTAGTTTT GGGA GAGACTACAGGGC        TTTTTTATATTTAAG 100 238
        rpsO  403238 ..  403261 + -14.6  -3.88823   ATTAGGCGATTTATA          GAAGGGGCGC TTGT GCGCTCCTTC           TTTGCGTTTAATATT 100 118
         pnp  405511 ..  405527 +  -7.2    -5.626   TAACTCACTAAAAAA              GTCCGC TTGAT GCGGGC              TTTTTTTATGGCATG 100 46
JCR18_RS01900  406796 ..  406818 +  -6.2  -3.07441   AAATAAATTTTTATT           TCTGCACGAC TGG GTCTTGCTGA           CTTGTTATTTAATAT  59 35
        gspF NONE
        gspG  416389 ..  416445 +  -6.9  -3.21416   TTAATTAAAATGTAA GAGAGATTATCGATTCGGTTAAT AAGATAAAACA ATAATCCGAATTGATAATCTTTC TTAATCATAAAAATA  63 37
JCR18_RS01945  417015 ..  417043 +  -9.1  -5.09225   AACAGAATTTTTAAA        TAAAACGTAGA CTCAACA TCTACGTTTTA        TTTTTTAACTGGACT  95 52
JCR18_RS01950  417478 ..  417499 +  -5.1  -2.94144   TTATTATAATTTAGC           GACGTGATT TGTA AGACACGTC            TACTTTACGTGGACG  51 32
        tusA  420333 ..  420362 + -15.9  -3.19026   CGATATGTAAATGAA       TAAAAAGCCCCGA ATAA TCGGGGCTTTTTG        TTACATCTTAGGATA 100 48
JCR18_RS01975  422912 ..  422924 +  -2.7  -2.93393   ACTTGCAATTAGGCA                CTTGA GGT TTAAG                CTTTATAGAGTGAAA  42 21
        murI  423844 ..  423859 +  -3.2  -4.10478   TGAGCTCTGTTGTAG              GCATTC AGAA GAAAGC               GTTTTTTTATATTTA  55 38
JCR18_RS01985 NONE
        hemH NONE
JCR18_RS01995  426751 ..  426762 +  -4.4  -3.08798   TGACTACCCTTGTCT                TGCT GAGG AGCA                 TCTTGGGTAGGCAGT  49 62
JCR18_RS02005 NONE
JCR18_RS02010  428827 ..  428840 +  -2.3  -2.59361   TTCTTAGAGAAATAA               CAACG AATT CGGTG                CTATGTTTGATATGT  39 26
JCR18_RS02015  429442 ..  429471 +  -7.1  -4.42748   TCATGTATTTATAGC       GCTGGGTACGTAG GTTA TTGCGTACTCTGC        TTATTTTTGGAGTGC  79 153
        crcB  430088 ..  430103 + -10.4  -3.31792   TAGCACAGCAAAACA              GCGGCA TCCA TGCCGC               TTGTCACGATAGTAA  83 183
JCR18_RS02045 NONE
JCR18_RS02050  435397 ..  435413 + -12.3  -5.52096   CATAAAATAAAAAAA              GCCGATG TTT CATCGGC              TTTTTTATTAGGTTT 100 36
        hemW  438591 ..  438605 +   -10   -2.7263   TTTGTAATTTTAGCG               GGTGGT ATA ACCACC               ATTTGCGAAAATCGT  77 82
JCR18_RS02075  440383 ..  440401 +   -11  -4.71482   ATAACAATAAAAAAA             GCCTCTCG AAC TGAGAGGC             TTTTTAGAATTTGGT 100 59
JCR18_RS02100 NONE
JCR18_RS02105  448530 ..  448547 +  -9.9  -4.41633   AAAATGATGTAAGAA             GGAGGAA TTTA TTCCTCC              TTATTTTTAAAACTA  93 44
JCR18_RS02110 NONE
JCR18_RS02115  449954 ..  449969 +  -3.9  -6.20267   TAGTTATTCTTAAAA              GCCCT CTAAAT GGGGC               TTTTTTTGTTTTTAA  95 44
JCR18_RS02130  453647 ..  453666 + -12.2   -5.4593   TTTTGTATTAAAAAA            GCCAGTTC ATTT GAACTGGC             TTTTTATTATTTTGG 100 51
JCR18_RS02150  460183 ..  460206 +  -3.2  -3.41024   TCTAACGACGAATAC          TATGACACAT CTCA ATGAGTTATA           TCTTATCTTAAACAA  48 152
JCR18_RS02155  461284 ..  461296 +  -6.3  -3.16921   CTGTGAAATTTGTCG                TGTAC AGA GTACA                TTAGTAGCAATTGAT  59 35
JCR18_RS02160 NONE
JCR18_RS02165 NONE
JCR18_RS02170  464058 ..  464075 +  -4.3  -3.46167   GGTTTATAAAACAAC             TAAAAAA CATT TTTTTTA              ATTTTATTAATGTTC  54 95
JCR18_RS02175 NONE
JCR18_RS02180  465200 ..  465224 +  -4.4  -3.81951   CATTAGCCAGGATAA          GATAGTGT TTGATTATC ACACTATC          TTTCCTACTCTACGC  58 51
JCR18_RS02200  468840 ..  468850 +  -5.4  -3.62591   CGGCTGCTTTTTCCA                 TACC AAA GGTA                 TTTGCACATTGTGGA  60 347
JCR18_RS02210  469583 ..  469606 +  -5.3  -2.65504   GACATTTAAATCAAG          CTGCTGCAT ATCTTG ATTCAGCAG           AGTTTTTGGTAAAAC  49 136
        leuC NONE
        leuD NONE
JCR18_RS02235  473725 ..  473742 +  -4.1  -3.82202   AAAAACTAACACCAC             GGCAGTCG TAA CG-CTGTC             TTGTCTTTGAAAATG  56 15
        leuB  474866 ..  474882 + -12.3  -5.73339   CACTTTGCTAAAAAA              CGCAGCT TAA AGCTGCG              TTTTTTTATGGTTGT 100 45
JCR18_RS02250  475861 ..  475878 +  -5.5  -5.16572   AAACGCAATAAAAAA             GCCACAT GATG AAGTGGC              TTTTTTGCATTCACT  80 42
JCR18_RS02260  477411 ..  477424 +  -6.7  -3.56643   TAAAAATTGGTTAAG               CCTAC TCAG GTAGG                TTTAACCAATGTGGC  65 44
JCR18_RS02290  484730 ..  484766 + -12.4  -3.83188   GAAAGCACAACCTCA    TTTACCCGAGTTTTGC AGGAC GCAGAACTCGGGTTGA    TATTTTATAGATATA 100 237
        gltP  486521 ..  486537 + -13.7  -5.83226   TTTAGTCGAAAAAAA              CCCGCGA ACA TCGCGGG              TTTTTTTATTGGGTT 100 52
JCR18_RS02320  491945 ..  491965 + -15.5  -4.65263   CATTACTAATTAAAA            TGGCAAGCG TTA CGCTTGCCA            TTTATTTTCAAAAGT 100 32
JCR18_RS02330  493545 ..  493560 +  -2.6  -2.60671   TGTCGGTTAATTGGA              CATTAT TTTT ATGATG               TAACTTGCGTTTTCT  40 97
JCR18_RS02335 NONE
        topA  496760 ..  496776 + -10.9   -5.1287   AAGATAGGTAAAAAA              TGCTAGC TCA GCTAGCA              TTTTTTACATCTACA 100 43
JCR18_RS02345  497592 ..  497617 +  -9.2  -2.67428   TGGCTGAAATAAAAT         TGTGGATAAA TACTGT TTTATCCACA          TCAATTGTTAATAAA  72 29
JCR18_RS02350  498317 ..  498333 +  -6.5  -5.95286   AAATAACGAACAAAA              GGGCACT TAG GGTGCTC              TTTTTTGTTTTTAGT 100 44
JCR18_RS02355 NONE
JCR18_RS02360 NONE
JCR18_RS02365  500958 ..  500975 +  -4.1  -4.07568   TCGTTAAGCTAAGAA             TAGCCAT ATAG ATGGCAA              TTTTAGAACAGGAAA  58 101
JCR18_RS02370  501584 ..  501611 +  -4.8  -3.08197   AAGTGCAAGGGTGCT        TTGCCACCATGT TGAA ACATGGAGGAAG         TATATGTCTATACAG  52 107
JCR18_RS02375  501899 ..  501916 +  -9.9  -5.72616   CTTAAGTTAAAAAAA             GCGTACT CTTG AGTACGC              TTTTTTTGTATGCAT 100 31
JCR18_RS02400 NONE
        purU  507573 ..  507590 +  -7.7  -5.64274   TATATTCCTTTAAAA             GCATGCT TTTG AGCGTGC              TTTTTTTATGGCTAA 100 46
JCR18_RS02410  508736 ..  508749 +  -3.1  -4.28375   TAACCTTAATCAGGA               GTTCG AATA TGAAC                TTTTCAATCTATTGG  57 62
JCR18_RS02415 NONE
JCR18_RS02420  509786 ..  509816 + -14.3  -4.67256   TCTAGTTTCACGTAA       TAAAAAAGCAACC AATTC GGTTGCTTTTTTA       TTTTCTCATTTATTA 100 43
JCR18_RS02460  515547 ..  515566 + -12.2  -4.88067   GATAGAAATAAAAAA            TGCCGATC AAGT GATCGGCA             TTTTTCTGGGTAAAT 100 36
JCR18_RS02490  523137 ..  523149 +  -4.9  -2.84195   GTGCCATCAGTCTAA                CAAAA GAT TTTTG                CTTACTTTTCATCTT  51 120
JCR18_RS02530  533391 ..  533417 + -13.8  -3.42985   TCTTTTGAGAAGTCA         GGAAAAGGCGCT TTA GGCGCCTTTTTC         ATTTTTAGGTATATG 100 41
        clpP  534183 ..  534195 +  -2.7  -2.76696   CCATAAGGGAAAATA                TTAAG TGG CTTGA                GTTGTTGGAAAACGC  40 35
        clpX  535607 ..  535632 +  -9.1  -6.09196   TCATTCATCTAAAAA         GCATGAATTGC CTCG GTGATTCATGC          TTTTTTTGTTTTCAA 100 44
JCR18_RS02545  536465 ..  536494 + -13.9  -3.91084   TAACAATTTGAGGTC       GATAAAGAAAAGT TAAG ACTTTTCTTTATC        TTTCATTAAGGGTGC 100 38
JCR18_RS02575 NONE
         eda  545608 ..  545634 +  -7.4  -5.32882   ATTGTGGTTTAAAAA         TCTAAAGTGTCT TTT AGGTGCTTTAGA         TTTTTTGTGATGCTG 100 55
JCR18_RS02585 NONE
JCR18_RS02590 NONE
JCR18_RS02595  549485 ..  549500 + -10.4  -4.96848   TATGGTTAAAAAAAA              CCAGCC TTCG GGCTGG               TTTTTCTGTGGGAAA 100 47
JCR18_RS02605  552469 ..  552497 + -10.4  -5.73563   AATTCTTTTATGATT        TGGAAGCCTC AAAACTCAC GAGGCTTCCA        TTTTTTTACTTTAAT 100 46
JCR18_RS02620  556851 ..  556870 +  -7.1  -4.93595   CTGCTTTATGAAAAA            GCACGCT ATTCTC GGCGTGC             TTTTTGAATTTTTAT  88 51
JCR18_RS02625 NONE
JCR18_RS02630  558879 ..  558900 +  -2.3   -2.9313   GCTATCGATTAGGTT           TGTGGATTT GCTA AAGTACACA            GTTCTTGATTTAGCA  41 66
        iscX  559217 ..  559229 +  -3.5  -3.05844   TAATGCGGCAAATTT                TTTAA AGT TTAAA                TCTTAAAATAAAGGA  46 104
         ndk  559699 ..  559726 + -13.6   -5.9218   TCGAAAGCATTCAAA        CCAGATAAGTGG TATA CTACTTATCTGG         TTTTTTTATTCTCTC 100 41
        rlmN NONE
        pilW NONE
JCR18_RS02655 NONE
        ispG NONE
        hisS NONE
JCR18_RS02670 NONE
        bamB  566989 ..  567022 +  -7.6  -4.02119   CGCTGTTAAAAATAT     CGGGGTGTTTGAATT AAATC AGTTCAAA-GCCCCG     TCTTTTATTATGGTC  77 80
         der  568551 ..  568570 +  -8.6  -5.75342   TTTTTAATTGAAAAA            GTCCAAAG TCTT CTTTGGGC             TTTTTTTTACAAAGA 100 45
JCR18_RS02685 NONE
JCR18_RS02690 NONE
JCR18_RS02695 NONE
JCR18_RS02700 NONE
JCR18_RS02705 NONE
JCR18_RS02710 NONE
JCR18_RS02715 NONE
JCR18_RS02720 NONE
JCR18_RS02725 NONE
JCR18_RS02730 NONE
JCR18_RS02735 NONE
JCR18_RS02740  579431 ..  579443 +    -2  -2.52464   GAATTTACAAGACCA                TTCA TAATT TGAA                TAAATTAAAAAGGAA  39 19
JCR18_RS02745 NONE
JCR18_RS02750 NONE
JCR18_RS02755 NONE
JCR18_RS02760 NONE
        fabG NONE
JCR18_RS02770 NONE
JCR18_RS02775  585345 ..  585355 +  -2.6  -3.69605   TAAAAGGCGACGTGG                 TTAA ATT TTAA                 TTAATTTTAAATAAG  48 15
JCR18_RS02780  586062 ..  586076 +  -8.5  -5.22039   CTCTCATAAAAAAAA               CCGCG AATTA CGCGG               TTTTTTGAGTTTAGG  95 51
         orn  589150 ..  589165 +  -8.2  -5.72254   CAAGTAAGAAGAAAA              GGGGGC GAAA GCTCCC               TTTTTTATTGTTTAA 100 51
JCR18_RS02810  590030 ..  590049 +  -9.3  -5.86061   TGAGTTGGTAAAAAG            TCGCTCC TAAATC GGAGCGA             TTTTTTTTCGTGCGA 100 44
JCR18_RS02815  590981 ..  591002 + -10.9  -5.14563   TCAGACATAAAAAAA           GCCGTAGTT GAAG GACTACGGC            TTTTTTACTGGGCGC 100 55
JCR18_RS02855 NONE
        ilvN  603265 ..  603284 +    -5  -4.42765   ATCAGGTATCGCCCG            TGGCGAAA AAGT TTTAGCCA             TTTAATTTTTTAAAA  67 1
        ilvC  604366 ..  604382 +  -9.4  -5.92399   TTGTTTTTAAAAGAA              CCCTGC TAAAT GCAGGG              TTTTTTATTTTATTA 100 53
JCR18_RS02870  606870 ..  606894 +  -8.5  -3.28791   TCAGATTATCCTTTG          CCTGCTGGC CTACATT GCCAGCCGG          TTGTCGCAGACCGAT  74 172
JCR18_RS02875  607951 ..  607989 +    -6  -2.79273   CTAAATTTATATAAA   GTTCAGGCGGTTATGCTT TTA AAACATATCAACCTGAAC   ATTATATTGAACCAG  56 85
JCR18_RS02885  609899 ..  609919 +  -8.3   -5.1675   GTTTATTCATAAAAA            GCCTGTTGA TAT TGAACAGGC            TTTTTTAATGGCTCA  93 49
JCR18_RS02890  611691 ..  611709 +  -8.9  -5.07652   TGTAAATGTGACAAA             CAGCTTC GAATA GAAGCTG             TTTTGTTTTGAAAAA  95 44
JCR18_RS02895  612585 ..  612609 +  -4.9  -3.36327   GAACAAATGTTTTAA          GTTGGTAGCAG AAT TTGCAACCTAC          TTGTAGATGCGCTAA  54 26
JCR18_RS02900 NONE
JCR18_RS02905 NONE
        acnA  617337 ..  617354 +  -6.3  -5.66338   AAGCTATATAAAAAA             GCCTTAT ATTC ATGAGGC              TTTTTTATTGTCTTT  93 56
JCR18_RS02915 NONE
JCR18_RS02920  618800 ..  618835 +   -12  -4.07885   CCTAATTTAAATATG    GAAAAGGCATGCGCTT ATGT GAGTGCATGCCTTTTG     TTTTGGGAAAAACTA 100 36
JCR18_RS02930  620002 ..  620016 +  -2.1  -3.88291   TCTATAGTAAGTATA               GGTGA CGTTA TCATC               TTTATAGACGTCATA  50 57
JCR18_RS02960 NONE
JCR18_RS02965 NONE
JCR18_RS02970  627754 ..  627781 +   -10    -5.055   AAGTTGCTTTGATAT        AAAAAAACCACC TTCG GGTGGTTTTTTA         TTTTTTGAGGGTTAG 100 39
        cysM NONE
JCR18_RS03010  636637 ..  636650 +  -2.5  -4.77896   TTTACGTCCCACTAT               TTTAA TCCT TTAAA                TTTTTAGGTTCATTC  63 5
        rlmD NONE
JCR18_RS03020  640411 ..  640428 + -12.7  -5.26316   CTAAATTGAGAAAAA             GGCCGTC AATT GACGGCC              TTTTTTATAAGCTAC 100 41
        mazG NONE
JCR18_RS03035  642615 ..  642632 +  -3.3  -4.09739   TGTTATTTACGTCCT             GACGTAG GAGA CAGCGTC              TTTTGCAAACCTTGC  56 130
        pcnB NONE
        folK  644568 ..  644584 +  -2.9  -2.84978   ACTTGCTGATGAGTC              TTGGGCT TAA AGCCGGA              CTTATTACGTTCTGC  43 16
        panB NONE
JCR18_RS03055 NONE
        rapZ NONE
JCR18_RS03065 NONE
JCR18_RS03070  647982 ..  648000 + -11.7  -5.98675   AGTTTTTAATAAAAA             GCGGCGT TAGAT ACGCCGC             TTTTTTATTTTTATA 100 44
        thrS NONE
        infC  652557 ..  652574 + -11.3  -5.29782   TAACACTCAAAAAAA             GCACTGC AAAA GCAGTGC              TTTTTTATGCCTCTC 100 38
JCR18_RS03090 NONE
JCR18_RS03095  653859 ..  653872 +  -6.7  -4.19336   TTATTTAAAATAAAA               GCATC CGAA GATGC                TTTATTAAAATGATT  74 33
        rpmI NONE
        rplT  655975 ..  655992 + -11.3  -5.95286   AGAGATTCAAAAAAA             GACCGCT TTTT AGCGGTC              TTTTTTATTTTTAGT 100 45
JCR18_RS03115  656605 ..  656623 +  -2.4  -2.77182   TTTTAACTGAGTAGG             TTAGTACG AGA CGAATTAA             TGCTTCACTCTAAAA  40 27
JCR18_RS03120  657272 ..  657286 +    -5  -3.49618   TGAGGTGCTTTTAAA               TGAGTT GCG GACTCA               TTCGTTGTATCAAAA  56 132
        pheS NONE
        pheT NONE
JCR18_RS03140  662007 ..  662024 +  -9.9  -6.02919   ACGCGTTGGAAATGA             GCAGATC GATT GATCTGC              TTTTTTTATTTATAA 100 13
JCR18_RS03150  662808 ..  662827 +  -9.2  -4.62783   CAACCAAATAAAAAA            GGCCACTC AATA GAGCGGCC             TTTTTAGAATAAATA  90 179
         ppx NONE
JCR18_RS03170 NONE
        tilS NONE
JCR18_RS03180 NONE
JCR18_RS03185  670164 ..  670180 + -12.3  -5.59655   GTAAGATTAAAAAAA              GGGCTGT ATT ACAGCCC              TTTTTTATTGGTTTA 100 45
JCR18_RS03195  675920 ..  675944 + -11.5  -4.37991   TCTGTACAGAAGAAT          CAAGAGCCTAA GCT TTAGGCTCTCG          TTTTAACTCTTTTTG 100 8
        gspE  679281 ..  679300 +  -9.3  -5.47159   GTAAGATATAAAAAA            TGCCCGA TATGAT TCGGGCA             TTTTTTATATTAAAA 100 44
JCR18_RS03250 NONE
JCR18_RS03255 NONE
JCR18_RS03260  686680 ..  686731 +  -8.4  -3.99678   TAAGATAAGTTCGGA TTACAGAAATTAGTAAATAAAGAT TGAG ATCTTGGTTTATTAACTTCTGTGA TTTCATTATCACGGT  79 46
JCR18_RS03265  690010 ..  690020 +  -5.4  -3.53761   TTCAATTCAGCCCAG                 TCTG TTA CAGA                 TTTGGAAAACGCTTC  58 144
         rrf  690204 ..  690228 + -20.1  -5.71712   GCTCATTATTCTAAA          CACCCCCAACC AGT GGTTGGGGGTG          TTTTTTTATATCAAG 100 38
JCR18_RS03275  691916 ..  691937 +  -4.6  -3.11359   TGGCTATTCTACTCA           TTCATTAT GACGAA ATAATGAA            ATTTCATTTTCACCA  50 52
        raiA  692417 ..  692436 +    -5  -5.84381   TTTTAATAATTGAGA            GAGGCT TGAAATAT AGCCTC             TTTTTTTATTGATAA  90 46
        ibaG NONE
        murA NONE
JCR18_RS03295 NONE
        hisD  696164 ..  696180 + -12.3   -5.0538   TTTCATGATTATTCA              GGGCTGA CTT TCAGCCC              TTTTTTGAGATAAGA 100 61
JCR18_RS03305  697290 ..  697326 +    -8  -3.22678   ATTCTTTAATACTTA    TTCTGCTGTGCTGTTC ATCAA GTTCAGCATAGCAGAG    ATTTTATCAAGACTT  71 32
JCR18_RS03315  699853 ..  699884 +   -11  -4.72007   ATTAATTTAAAGATT      TGTAAAAAGCGCGT TTAT ACGCGCTTTTTTTA       TTTATTTTAATAAAA 100 36
JCR18_RS03320 NONE
JCR18_RS03325 NONE
JCR18_RS03330 NONE
        filE NONE
JCR18_RS03340  707106 ..  707135 + -16.7  -4.12043   AACATATTCAACAAA       TAAAAAAGACCGC AAAA GCGGTCTTTTTTA        TTATTTAATTGATTA 100 39
JCR18_RS03350 NONE
JCR18_RS03355  709010 ..  709029 + -12.2  -5.30616   GCGAGATATTTTCTA            TGCCAAGC ACCA GCTTGGCA             TTTTTATTTAGATAG 100 48
        tsaB NONE
JCR18_RS03365  710574 ..  710590 +  -9.5  -3.52192   GCTTGTCGTTTTGAT              GCTTACT TTC AGTAAGC              TTATGTAAGGTTAAG  80 11
JCR18_RS03370 NONE
        fghA  713332 ..  713350 +  -7.4  -2.80474   CTTGGCATTCTATAG             TAGCAACG TTA CGTTGCAA             GTTTGAAATGTTGTC  63 367
         rpe  714289 ..  714304 +    -9   -5.1764   AAATGTATGAAAAAA              GAACGC TTTG GCGTTC               TTTTTCTATTCTATC  95 175
JCR18_RS03390 NONE
JCR18_RS03395 NONE
JCR18_RS03400 NONE
JCR18_RS03405  718559 ..  718587 +  -5.4  -5.38951   AAGTAAGCTTAATGA       CA-TGCCATTGGT TTAT ACTGATGGCATTG        TTTTTTGTGTCAGTT  84 53
JCR18_RS03410  719566 ..  719597 +  -4.4  -5.79595   AATAATATTTTCTGA      TAGAGGCAAGCTTG AGTT CGGGTTTGCCTTCA       TTTTTTATTTTAAAG  87 36
JCR18_RS03415  720015 ..  720035 +  -2.5    -3.186   TAATGAAAATTTCGT            CTCCATCCT AAG AGGATCAAG            TATGTTGCTGTCTTA  44 15
JCR18_RS03420  720584 ..  720602 +    -3  -3.81279   GATATTTCATATAAA             GCGTGTTT TAT AACCTCGC             TATTTTCTGAAATAT  52 93
        argJ  721892 ..  721907 +  -6.1   -5.4505   TTCAGTTATAATCAA              GCCTC GACAAA GAGGC               TTTTTTATTAGCCCC  88 44
        nadA  723099 ..  723122 +    -4  -2.70603   AAAAGCCTCAAAATG          CTTGTTAAAT ATAC ATTTGATAAG           GATTTTTAACTTTTT  46 40
JCR18_RS03435  723340 ..  723351 +    -3  -2.52676   CGGCGAAGTATCGCA                TGAT AAGC ATCA                 TCGGTTAAGCGCCTG  42 62
JCR18_RS03440 NONE
JCR18_RS03445 NONE
JCR18_RS03450  723675 ..  723702 +  -3.6  -6.14618   CATATATTAAAATCA        TTTCTTCTTATCT TAT GGAT-AGAAGGAA        TTTTTTTGTTTTCTA  91 74
JCR18_RS03460  726461 ..  726485 + -10.2  -5.39755   ACGCTTAACTAAAAA          GATTGTGATT TGATT AATCACAATC          TTTTTTATGGTTATA 100 55
JCR18_RS03470  728972 ..  728991 +  -6.4  -3.68853   ATTTTTAAAAATAGA            GGTGTTCT TTCG GGAGCACC             TTTAGGGATTTTTAC  64 48
JCR18_RS03475  730511 ..  730525 +  -7.1  -3.29511   AAACAATGACAGGGA               GGTGC GTTGA GCACC               TTCTAAAAAGATAAG  66 39
JCR18_RS03480  731836 ..  731850 +  -7.1  -4.44667   GTTGAATATAAAAAA               CCGCT TTTAT AGCGG               TTTCTTATTAGGAAG  79 82
JCR18_RS03515 NONE
JCR18_RS03520  742075 ..  742116 + -11.9  -4.62471   CTAAAAAGTAAGTTA CTCATAAAAAAAGATGCAT TCAT ATGCATCTTTTTTTCTAAG  TTTTTAAAAGTTAAG 100 30
JCR18_RS03530  744391 ..  744409 +  -3.1  -3.48276   AACATAGCTTTTTAT             CTCACTC AAATG GACTGAG             TTCTGTACGAAGCGC  48 41
JCR18_RS03540 NONE
JCR18_RS03545 NONE
JCR18_RS03550  748655 ..  748697 + -10.1  -3.19339   AATAAGTGGTATAAA GGGTTACTTTTTTGATGGT GGTTG ATAATCAAACAAGTAACCC TCATTTTACTTACTA  82 49
JCR18_RS03555  749512 ..  749534 +    -7  -3.04398   TCAGATTATGCTTTG          CGTGCTGGC CACATT GCCAGC-CG           GTTTTAGCAGACCGA  62 229
JCR18_RS03565  751937 ..  751969 + -11.5  -2.65264   GAAACTCTAATTTTA      TAAAAAGCCCATTTG AGA TAAATGGGCCTTTTA      TAATCTGACTAATAA  86 51
JCR18_RS03610  758963 ..  758995 +  -3.5  -3.86112   TTTGGAGAAGTTTTG     GGGGC-AGGTGTTA TAAATT TAACACCTAGGCTC      TTTAACTTATATTCT  54 10
JCR18_RS03615  762302 ..  762326 +  -8.7  -3.92592   GTACAAAGTTAAAAG          GTTCTTTGAAA CCT TTACAAAGAAC          TTTCATATTCCACGT  79 486
JCR18_RS03625  764659 ..  764687 +  -6.1   -3.2362   CTCTTTAATAAAAAA        CACCTTCCAAA CTCAAGA TTTGAAAGGTG        CTTTTATAGGGGTTA  61 280
JCR18_RS03645  770091 ..  770101 +    -4   -3.0462   TTTTCCTCAATTAGT                 TCTT TGT AAGA                 TCATATTTTTAATAT  48 17
JCR18_RS03650  771044 ..  771083 + -25.4  -4.37886   TGCTGGTGTACAAAA  CAGTAAAAAGCTGGCTTG GGAA CAAGCCAGCTTTTTACTG   TTTTGTACAAGATAA 100 85
JCR18_RS03660  774335 ..  774365 +  -9.9  -4.08767   TGAATAGTAATGAAA       TAAAAAATCCGAC TTAAT GTCGGATTTCTTA       TTTTAGCGGCATCAG  90 131
JCR18_RS03665  775894 ..  775904 +  -2.6  -3.48747   TCTTTGTTTAGATAT                 TAAT TTT ATTA                 TAATTTTTTGCTTTT  46 30
JCR18_RS03675  777080 ..  777093 +  -3.1  -3.89524   CAGGTTCAATTAAAC               CTTGG GACT CTAAG                TTTGTCACATGAGAT  54 204
JCR18_RS03715 NONE
JCR18_RS03720 NONE
JCR18_RS03725  789559 ..  789576 +  -2.7  -3.72576   GAGAAATGTTTGATG             GTTTTGA GATA TCAATAC              TTTCATGAAAGAGCC  50 174
JCR18_RS03760 NONE
        bfmR  800160 ..  800171 +    -3  -2.75957   TTAAAGAAACCAATG                GATT GTAA AATC                 TGATTAAACTTCCTA  42 18
        bfmS  801838 ..  801854 +    -8  -5.87996   AAGACCAATAAAAAA              GCACCT GCATA AGGTGC              TTTTTTTATTGCTTC 100 14
        ndhC NONE
JCR18_RS03790  805422 ..  805438 +  -5.2  -3.14463   TTGACGGTGTTTTGA              CATATC TAACC GATATG              TTCATCGAGAAAATT  54 45
        nuoC NONE
        nuoE NONE
        nuoF NONE
        nuoG  811804 ..  811855 +  -3.8  -3.60098   GCTGAACCTGTTTCA GTGGCATTAGGAGTGTAAT-TCATG AAT CAAGAAATTATACGTCAAACGCCAC TTTGGGCTGAGAACT  53 8
        nuoH NONE
        nuoI NONE
        nuoJ NONE
        nuoK NONE
        nuoL NONE
        nuoM NONE
        nuoN  819222 ..  819257 +   -15  -3.27298   ACAATAATTCTTGTG    TACAAAAAAGCCTCCA AATA TGGAGGCTTTTTTTTA     TTGATAGTTAAAAAA 100 34
         upp  820026 ..  820037 +    -3  -3.17194   AAAGTCTCTTTTTAT                TTAC TACA GTAA                 TTGCATTGGGAAAGT  45 102
JCR18_RS03855  820370 ..  820390 +  -8.3   -3.1506   GCTAATGAATGTGAA            GATCAAGCT TTA AGCCTGATC            TTCATCGCAAAATTT  70 36
JCR18_RS03865  822132 ..  822142 +  -2.6  -5.29782   ACAGGAAGTAAAATA                 TTTT AAG AAAA                 TTTTTTATGGATATG  69 43
JCR18_RS03875  823130 ..  823153 +  -8.9  -5.46629   ATATCGTGATAAAAA          GCCTTTAGG ATGTGA CCTGAAGGC           TTTTTTTGCAATCTT 100 54
JCR18_RS03880  825065 ..  825088 + -12.5  -3.68024   TTTTTGTGATAAGTT          CGACCACTC TATATT GAGTGGTCG           TTCTGTCTTGGACAG  95 85
JCR18_RS03885  825504 ..  825520 +  -2.1  -3.57144   TCAGCAGTACGATAT              CCTTCTG TGC CTGATGG              TTTAACAATAAAACC  47 225
JCR18_RS03915  831798 ..  831826 +  -5.5  -4.57073   AATATCTAAAAAATA       TAAAGCCA-ACT CTTTGT AGTCTGGCTTTA        TTTTTGCGCAAAATA  71 56
JCR18_RS03920  832210 ..  832227 +  -8.4  -5.76633   GTTAGAAATAAAAAA             GCTCCC AATGTA GGGAGC              TTTTTTTATATGTAG 100 117
JCR18_RS03930  835087 ..  835103 +  -2.2  -3.60627   TTGAAAAATCATGAT              TCTGCT GAATA AGCTGA              TTTAAACTAAAATCC  47 14
        apbC  836483 ..  836499 + -12.3   -5.4833   TTTTGATTCATCTGA              CCCGACT TTA AGTCGGG              TTTTTTATTGGCTGG 100 35
JCR18_RS03940  837507 ..  837539 +  -2.2  -5.40625   CAATTTAATTTTAGG     CAAGAAGATGAATTCT TAT AGAG--CGTCTTCTTG     TTTTTTATGTCCTGT  71 41
JCR18_RS03950  839049 ..  839079 +  -4.1  -3.16345   TTTAAAAATTTATTC      CG-GGCTATTCTTA GCGA TAAGAGTAGCCGCC       ATTGTTTTCATAATT  48 36
JCR18_RS03955  839751 ..  839771 +  -8.3   -5.4251   GATGAGCTTTAAAAA            TGGGTCACT TTA AGTGGCCTA            TTTTTTATATATACC 100 54
JCR18_RS03960  841562 ..  841577 +  -6.2  -3.04792   TTTTACATGCTTTTT              TTTGCA TTTG TGCAAA               TATTCCGCATAATAG  59 90
JCR18_RS03965 NONE
JCR18_RS03970  844477 ..  844494 +  -4.9  -2.78867   TCATGGTCTTTAGCT             GT-GATGG TAG CCATCCAC             GTTGTTAAAGGTTAA  50 0
JCR18_RS03975  846956 ..  846972 + -10.9  -5.38951   AACTAATCAATAAAA              GTGACGT TTA ACGTCAC              TTTTTTATATAAATT 100 35
JCR18_RS03980  848094 ..  848131 + -18.7  -3.71794   CTTAACCTGAAATAC   CAAAAGAGGGCGGTTGT TTAA ACAATCGCTCTCTTTTG    TTTGAGTGATTAAAT 100 58
         ffh  851535 ..  851569 + -15.3  -3.84985   AAAGAAATAAATCCA     TAAAATAAAAGGCGC ATATA GCGCCTTTTATTTTG     TTCTGTATTTTAGTC 100 31
JCR18_RS04010  853948 ..  853970 +  -4.9  -5.63517   TATATAGAAAAGAAA           GCTTAGACT CTCAC GGTTTAAGC           TTTTTTATTTGAAGA  85 58
JCR18_RS04015  854852 ..  854866 +  -2.1  -2.68088   GGGCGAGACGCTCAC              GCCGCT AGTT AG-GGC               ATTATGCGTTTAAGC  40 18
         smc NONE
JCR18_RS04025  859412 ..  859431 +   -10  -5.31877   TCTAGTCGCAGCTCA            GGGTGGAG AAAT TTCCACCC             TTTTTTATGGTGAAT 100 79
        ligA  861561 ..  861591 +  -9.1  -4.85782   TTTGCTATATTTGAA       CGCTTGTCTGA GCATATAAA TCGGACAAGCG       TTTCTTTTTGCAAAG  93 97
         bfr  862213 ..  862242 + -14.5   -3.1944   TCAAATTTAATGACT       TGAAAAACCCAGC CTAG GCTGGGTTTTTTA        TTGGCTCATTTTAAT 100 31
JCR18_RS04040  863924 ..  863947 +    -6  -4.58395   AACGATTAATACGTT          CAGCTTTAGA CATC TCTAGAGCGG           TTTTTAAAGAATCCA  77 254
JCR18_RS04055  867111 ..  867128 +  -4.9  -2.55847   TTAACAATTCATCAG             CAAAGTT CATA AGCTTTG              ATTGATCTCGCAATT  50 14
        bioA NONE
JCR18_RS04065 NONE
        bioC NONE
        bioD  871068 ..  871085 +  -8.4  -4.98531   TAGGCCATAAAAAAA             CCGCTC AATTTA GAGCGG              TTTTTGATTTAAAAA  91 50
JCR18_RS04105  875706 ..  875723 +  -3.5  -3.32844   AAGGGTAAACTTAAC             TCATAAT TTGT GTTATGA              TTATGGGATAAGACA  48 20
        rpmF  876016 ..  876031 + -10.4  -6.04419   AAGTATAGAAAAAAT              GGGAGC GAAA GCTCCC               TTTTTTTGTTGTTTT 100 70
        fabD NONE
        fabG  877825 ..  877856 +  -9.7  -4.20883   TACATGTAAATGGTG      GTTTATACAT-GGC CTAAC GCCGATGTATAAAC      TTTTAAAAATTTTTA  90 9
        acpP  878190 ..  878205 + -10.4  -5.61596   TGATTAAAAAAGAAG              GCCACC GGAA GGTGGC               TTTTTTTATACGAGT 100 53
        lysM  878835 ..  878863 + -17.7   -4.3255   TCAATAATAGGAATA        TAAAAAAGGCGCT TAA AGCGCCTTTTTTA        TTTATTGGTTAAAAC 100 34
JCR18_RS04140  880434 ..  880463 +  -6.5  -5.59962   GAATTATAATTTAGA       GGTTTGACCTG CAAGTGAA CAAGTCAAACC        TTTTTATTTATTTTA  93 48
JCR18_RS04150 NONE
JCR18_RS04155  883902 ..  883934 + -11.6  -4.77986   GTTTATAAAGTCTTA     TAA-AAAAAGCCCGT ATTT ACGGGCTTTTTATTA      TTTTTAAATCTTTAA 100 33
JCR18_RS04215  891876 ..  891900 +  -8.7  -3.18264   AAACGCTTACCTAAG          CCTAATTTTTC ACG GAAAGATTGGG          TTAGTAGATAGCGAA  68 500
        rluD NONE
        pgeF  896500 ..  896539 +  -9.6  -5.80951   ATTGTTTTAATAATA  CTCTCTTATGTTGTTT AAATTTCA AAATAGCATAAGAGAG   TTTTTTATTTTGAAT 100 74
JCR18_RS04240  897238 ..  897253 +    -9  -4.87807   GTGAAAAATAAAAAA              GCCTCT ATAA AGAGGC               TTTTTAGTCTATTAC  93 40
        coaD  898366 ..  898378 +  -6.3  -2.92463   CATCAACAAGGTTGG                TAACG TGT CGTTA                TATATCACTGATGAA  58 23
JCR18_RS04255 NONE
        rnpB NONE
JCR18_RS04265  899164 ..  899183 + -13.6  -5.73339   AGCCACCATTTTACA            GACCACGC TCCT GCGTGGTC             TTTTTTTATGCTTGT 100 33
JCR18_RS04270  900511 ..  900536 +  -9.1  -5.93809   AAAAGTAAACTATTG         CCCTAAGTG AACAGGCC CACTTAGGG          TTTTTTTTATAGAAA 100 46
JCR18_RS04280  902745 ..  902756 +  -4.4   -2.9356   TATGGAATAACGCCA                TCCA AAAA TGGA                 TGTATGGATATGGAT  49 31
JCR18_RS04285 NONE
JCR18_RS04290  905377 ..  905389 +  -3.4  -2.69601   CCGCATGTTTGGCAG                TGTC GAAAA GACA                TCAATTTAATATCGA  44 4
JCR18_RS04295  906573 ..  906599 +  -9.6  -3.73068   AACAAAGGGATTTAT         TCAGGTGTAA ACATGAC TTACACCTGA         TTCTTCAGTTAGGAA  82 42
JCR18_RS04300 NONE
JCR18_RS04305  909126 ..  909161 +  -3.6  -3.73775   GAATTTGCTAAAAAA    TGAACAAATAATGGT GATCTGA ATCA-TATTTGTTCA    TTTGGTGGGCATAAA  52 75
JCR18_RS04310  909316 ..  909339 +  -9.6  -5.20633   ATAGCCACCATTTTA          AAAACCACGC TCCT GCGTGGTTTC           TTTTTATCTATTTTT 100 31
JCR18_RS04345  917535 ..  917563 + -10.5  -5.14563   CTTACAATTATGTGC        CCTTAAAAAGAGG TGT TTTCTTTTTAAGG        TTTTTTAATAACGGG 100 171
        rpsL  917991 ..  918005 +    -2   -3.8646   TAGTCCAAAAGCCCT               TTAGCG TTT CGCTTG               TTTGAATTCTTCATA  50 52
        rpsG  918712 ..  918738 + -11.6  -3.65542   CCCGCTTGAGTATTC         GTGCGCATCAAT TTA ATTGGTGCGCCC         TGTTTTAAAGATAAC  93 143
        fusA  920961 ..  920983 + -12.1  -2.77899   GTTAAAAACCAAGTG           CTCATGGAG TGACC CTCCATGAG           TAGTTAATAAAGGAA  87 75
         tuf  922216 ..  922233 + -10.5  -5.71712   TTTTCAGTGAAAAAA             GCGCTCC TTTT GGGGCGC              TTTTTTTATATCGAA 100 45
JCR18_RS04375  924489 ..  924504 +  -6.8  -5.62045   GAAAGTAAGTGAAAA              GGGCTG TTAG CAGTCC               TTTTTTATTGTCTAT 100 44
JCR18_RS04380  925600 ..  925616 +  -9.5  -5.89827   AAACTGACTGGAAAA              GAGCAAT TTA ATTGCTC              TTTTTTTTACTCGTT 100 43
        rimI  926640 ..  926652 +  -6.3  -3.28416   CATCGGCATGGCGCT                CGTTA ATG TAACG                TTCATATAGATCATA  60 519
JCR18_RS04405  932145 ..  932158 +  -8.1  -5.71983   TATAGTTAAAATTAA               GCCTC TTCG GAGGC                TTTTTTTATGGTTAA 100 45
        rhtC  932906 ..  932934 + -13.4   -2.5619   GATAAATCCAGATAA        TAAAAAAGCCTC TTTAT GAGGCTTTTTTA        ATTACTAACTTTTAG 100 36
JCR18_RS04455  939142 ..  939155 +  -8.1  -5.64274   TTATTGTTTCAAAAA               CCACC TTCG GGTGG                TTTTTTTATGGGTGA 100 49
         rep  941329 ..  941351 +    -2  -5.85011   AATATTTGGCAAATT           TAAAAGCTTT ATT AAAGCGTTAA           TTTTTTTAATTTTTA  78 3
         dut  941853 ..  941877 + -12.3  -4.62471   AAAAAATAATGAAAA          GAAACGCTTGT TTT ACAAGTGTTTC          TTTTTACACCTTGAA 100 50
JCR18_RS04470 NONE
        argB  944392 ..  944408 +  -4.4  -5.75478   TATTTTTTATTAAAA              GATCAC GCTAA GTGGTC              TTTTTTTATGTCATT  87 48
JCR18_RS04480  945268 ..  945279 +    -3  -4.04187   ACAAAATGGCTCAGC                GATA AAGT TATC                 TTATATTTTGTAATA  55 21
JCR18_RS04485  946286 ..  946317 +  -4.7  -4.93547   TTTTGTTTATTTAAT      AATAAAGTATTTT GTTTAA AAAATACTTTATC       TTTTTAGTTGGTTAA  75 82
JCR18_RS04490  946974 ..  946998 + -11.5  -5.88565   TATACAGTTAGCGCG          GCAAACTATCG TTT CGGTGGTTTGC          TTTTTTTATTGTGCA 100 62
JCR18_RS04495 NONE
JCR18_RS04500  948487 ..  948511 +   -10  -5.05606   GCTCAATAAGCAAAA          CCCCTCAAGT ATTTC ACTAGAGGGG          TTTCTTTTTATTAGA 100 32
         fur  949514 ..  949535 + -11.7  -5.60993   AAAACAAATAAAAAA           GGAAGGTTA CGTT TAACCTTCC            TTTTTTTATGAAGAA 100 57
JCR18_RS04525  952725 ..  952745 + -16.9  -5.18355   GCAGAATCTAAAAAA            GCCCCGACA GGA TGTCGGGGC            TTTTTAGTTTTTAAC 100 196
JCR18_RS04540  958279 ..  958303 + -12.9  -2.53995   ATAATTCATATGAAA          TAGCCACCGAT AAA AGCGGTGGCTA          TAAATTAAAATAAAT  95 37
JCR18_RS04550  959564 ..  959574 +  -5.4  -3.83486   CCACAAAAACTGATA                 CGAT TAG ATCG                 TTATTAAATTTTATA  61 45
JCR18_RS04555  960981 ..  960998 +  -3.4  -3.57441   CTGACCTTGCACAGG             TTCGAC TGGAAT GTCGAG              TTGTAATTGTGAGTT  50 467
JCR18_RS04570  963351 ..  963363 +  -6.9  -5.63374   TTAAGCATTTAAAAA                GCGCT CAG GGCGC                TTTTTTTCATATTAA 100 51
JCR18_RS04575 NONE
JCR18_RS04580  966287 ..  966304 +  -7.7  -5.42259   ACTAAACATCAAAAA             GCATCTC TTCG GAGGTGC              TTTTTTTAGGCCTAC 100 36
         ggt  968582 ..  968599 +  -7.7  -5.60993   CCAACATAAAAAAAA             GCTGTCA TTTT TGGCAGC              TTTTTTTATGAGGGG 100 43
        ssrA  969134 ..  969158 +  -9.4  -5.19261   AGAGTTGATCAAAAA          GCCTTAAATC TTAAT GATTTAGGGC          TTTTTTAATGCCTTT 100 73
JCR18_RS04595 NONE
JCR18_RS04600 NONE
JCR18_RS04605  971738 ..  971754 +  -9.4  -3.38683   AAATTAATGAAAAAA              GGCGCT TAATT AGCGCC              TTAAATTTTGAATCT  80 17
JCR18_RS04690 NONE
JCR18_RS04695  981294 ..  981318 +  -6.5  -3.89614   TCGGATATTAAAAAA         CCACTACCTG CGCAAA CAGG-AGTGG          TTTATAGGCATTCAG  66 30
JCR18_RS04700 NONE
JCR18_RS04705 NONE
JCR18_RS04710 NONE
JCR18_RS04715  983718 ..  983730 +  -4.1  -4.33153   ATGCAATTTTTCGCT                TCACG GAC TGTGA                TTTATTGATATTGGA  60 521
JCR18_RS04725 NONE
JCR18_RS04730 NONE
JCR18_RS04735 NONE
JCR18_RS04740 NONE
JCR18_RS04745 NONE
JCR18_RS04750 NONE
JCR18_RS04755  988781 ..  988808 + -14.4  -5.08088   GCGCTTTTTTCGCTA        GGTCTATTTCTT AAAA AAGAAATAGACC         TTTTTATTAGGAATT 100 313
JCR18_RS04760  989637 ..  989661 + -13.7   -5.4148   ATGTGGATTTCATAA          GCTCATTTCTG GTT CGGAAATGAGC          TTTTTTAATTCTTTG 100 258
JCR18_RS04765 NONE
JCR18_RS04770 NONE
JCR18_RS04775 NONE
JCR18_RS04780  993025 ..  993046 +  -9.5  -5.18726   AATTATGATTCAAAA           TGCCCTATA TCAG TATGGGGCA            TTTTTGTTATGACAG 100 78
JCR18_RS04785 NONE
JCR18_RS04790  996438 ..  996459 +  -8.7  -5.90981   ATGATCAAGAAAAAC           CGCCGTGAT AGTT ATCACGGCA            TTTTTTTTCATATAA 100 51
JCR18_RS04795 NONE
JCR18_RS04800  998679 ..  998709 + -14.2   -2.8372   AATAGGACTCCCCTA       ATAAAAAGCCAGCT ATT AGCTGGCTTTTTAA       GTTTACTGACAAATA 100 68
JCR18_RS04805  999551 ..  999564 +  -8.1  -5.38054   AATTTAAAATAAAAG               CCTGC AAAT GCAGG                TTTTTATTTATAAAC 100 39
JCR18_RS04810 1000768 .. 1000796 +  -6.9  -5.25803   TATATACAAAAGCAA        TACCCTTAATA CAGTTCT TATTAAGGGTG        TTTTTTATGCAAATT  88 190
JCR18_RS04815 NONE
JCR18_RS04820 NONE
JCR18_RS04825 NONE
JCR18_RS04830 1003501 .. 1003515 +  -2.2  -4.08485   AATAGCAGCTAAGCC               TTATGA GAT TTATAA               TTTAATTTAAATCAA  52 1
JCR18_RS04835 NONE
JCR18_RS04840 1008169 .. 1008190 +  -4.3  -5.36441   CAAAATGATTTCATA           GTCCTGTTC ATTA GTTCAGGAC            TTTTTTATATGCAAC  81 79
JCR18_RS04845 NONE
JCR18_RS04850 1008941 .. 1008962 +  -6.6  -5.64274   ACAATTGAAACAATA           GCCTCAAT CACAGC ATTGGGGC            TTTTTTTATGGCTAG 100 70
JCR18_RS04855 NONE
JCR18_RS04860 NONE
JCR18_RS04865 NONE
JCR18_RS04870 NONE
JCR18_RS04875 NONE
JCR18_RS04880 NONE
JCR18_RS04885 NONE
JCR18_RS04890 NONE
JCR18_RS04895 1016977 .. 1016991 +  -2.2  -3.10597   AGGTGATGGAGAAAC               TAAATG AGC TATTTA               ATTTTCAATGAAAAA  42 19
JCR18_RS04900 1017329 .. 1017346 +  -7.7  -5.56264   AGCTACATTTTCTTT             GTCCTCA ATTT TGGGGAC              TTTTTTATGTTTGGA 100 72
JCR18_RS04905 1019230 .. 1019247 + -11.3   -4.6856   AGTAAAACAGATAAG             GGCGCAT TTCG ATGCGCC              TTTTTACCCTATTTA 100 40
JCR18_RS04910 NONE
JCR18_RS04915 1020216 .. 1020229 +  -6.7  -5.86332   TTAGGAAATGAAAAA               CCACT TTCG AGTGG                TTTTTTTTACATTGG 100 44
JCR18_RS04920 NONE
JCR18_RS04925 1022407 .. 1022430 +  -8.2  -2.84999   TACTAATTACTCATA          GGTAAGGTCA TTTT TGGCTTTACC           TATAATCCATTTAAT  68 35
JCR18_RS04930 1022752 .. 1022769 + -11.3  -3.83026   AGTTCTAAAAAGAAA             GCCAGCT GTAT AGCTGGC              TTTAATATAAGGGGA  95 40
JCR18_RS04940 1024547 .. 1024564 +  -5.5   -5.4505   AAGCTGATTTAAAAA             GCTACCT TTTA GGGTGGC              TTTTTTATTAAGACC  84 395
JCR18_RS04950 NONE
JCR18_RS04955 1025233 .. 1025246 +  -9.5   -5.5353   ACAGATGTGATATAG               CCCGC TTTT GCGGG                TTTTTTATTAATATA 100 31
JCR18_RS04960 NONE
JCR18_RS04965 NONE
JCR18_RS04970 NONE
JCR18_RS04975 NONE
JCR18_RS04980 NONE
JCR18_RS04985 1038878 .. 1038893 + -10.4  -4.00532   ACTGGCTATTAAAAA              GCCCCT TATT AGGGGC               TTTCATGTTTAAGCA  91 29
JCR18_RS04995 NONE
JCR18_RS05000 1041444 .. 1041460 +  -2.9    -2.981   CCCAACTTAAAATAA              GCTATGG AAC TCATTGC              CTTTATAGATTCACC  43 26
JCR18_RS05005 NONE
JCR18_RS05010 1044934 .. 1044981 +  -8.2  -4.14633   AATTTTTAACATTGG TATTAGAACATTTAATTAATCTA TTG TTGACTAAT-AAATGTTCTAATA TGTTTTTTGGGAATA  79 39
JCR18_RS05015 NONE
JCR18_RS05020 1046783 .. 1046798 + -10.4  -4.45175   TTAGAATAAGATAGG              CCCTCC ATTA GGAGGG               TTTCCTTTTTTAATA  95 32
JCR18_RS05025 1047791 .. 1047816 + -14.9  -3.51976   AGGTGCTTAACAAAT         GAAAACCAGCT AACT AGCTGGTTTTC          TTAATTTGGGGAGTT 100 111
JCR18_RS05035 1049274 .. 1049294 +  -8.3  -5.36441   TATTTGTAAATAATG            GTCCTATTC AAT GAGTAGGGC            TTTTTTATGTCCAAA 100 86
JCR18_RS05040 NONE
JCR18_RS05045 NONE
JCR18_RS05050 1051020 .. 1051036 +  -2.9  -5.89827   TTTTCACATAGAAAA              GTCTGAG TAA TTCGGGC              TTTTTTTTCATGCTT  81 41
JCR18_RS05055 NONE
JCR18_RS05060 1052283 .. 1052300 + -11.3  -5.57396   AGCACTTTAAAAAAA             GCCCTGA ATAT TCAGGGC              TTTTTTATTAATTAT 100 126
JCR18_RS05090 1056649 .. 1056673 + -12.3  -5.32565   CGTATAAAGCGGAAA          GGCTTAAATCT AAG AGGTTTAAGCC          TTTTTTAATTCCTTA 100 270
JCR18_RS05095 NONE
JCR18_RS05100 1059614 .. 1059632 +  -2.4  -6.23317   CCTTTTTTCTGCTAT             TTAGACCA GCT TGGTATGA             TTTTTTTATTTTTAT  85 22
JCR18_RS05105 1061014 .. 1061038 + -10.1  -3.67564   AAGGATATAAACAAT          TGCTATGGTTG TTC TAGCCATAGCA          TTTGCATCACTACTT  80 81
JCR18_RS05135 1067572 .. 1067586 +  -5.8  -3.99898   CTTGACTTGTTTAAA               TGATAA TTA TTATCA               TTTGTGAGTTCCTTG  67 115
JCR18_RS05140 NONE
JCR18_RS05145 1069333 .. 1069344 +  -4.4  -3.33261   CAAAAGCGGAATCGA                TCGA TTTT TCGA                 TTCTCAACATTGGCG  52 201
JCR18_RS05150 1072600 .. 1072613 +  -3.1  -4.27316   TCAATAAACTAAAAA               TAGCG AAAT CGTTA                TTTTAAATTAAACAA  57 155
JCR18_RS05155 1073461 .. 1073492 + -15.4  -6.04324   AAAAATTAATGAATG      CAAAAGGAATCTAC ACAC GTAGGTTCCTTTTG       TTTTTTGTTTTTTGG 100 32
JCR18_RS05160 NONE
JCR18_RS05165 NONE
JCR18_RS05170 NONE
JCR18_RS05175 1077547 .. 1077560 +  -3.9  -4.07486   CGACATTAAACACTC               TATGT TTTT ACATA                CTTTTTTGTTTTGAT  58 510
JCR18_RS05185 1078414 .. 1078440 +  -7.3  -3.54741   TAAAGTCCAATCGAA        GCTGAG-CCGAA ATTG TTCGGGCACAGC         TTTACAGGCATAATG  68 71
JCR18_RS05190 1080428 .. 1080447 +  -2.1  -2.74488   GTTTTTAGAAAACCA            CTGCTGA AATAGC TCAACAG             TGGTTGAAGTGATTA  40 48
JCR18_RS05230 1091382 .. 1091413 + -12.6  -2.58183   TTTGCGTTCAAAGCA      GTCTTTTCATTATT GTTA AATAGTGAAAAGAC       TAAATTGAATATTTT  89 69
JCR18_RS05235 NONE
JCR18_RS05240 1094166 .. 1094206 +  -7.1  -4.70739   AACCTCATATAAAAC  GATGCTGTGTCATTT AAAATGGAACA AAATGGCATAGCATC  TTTTGATTATTTTTG  80 43
JCR18_RS05245 1094932 .. 1094956 + -10.8   -5.4505   ACTTCTTAAAAAAAA          GATCGAACCG CAGCA TGGTTCGATC          TTTTTTCTTCACCGA 100 32
JCR18_RS05255 1096757 .. 1096769 +  -6.3  -4.49041   GAAATACTTCAATAT                TCTCT ATG AGAGA                TTTAATTTTTTATAT  74 49
JCR18_RS05265 NONE
JCR18_RS05270 1099327 .. 1099375 +  -7.9  -3.61356   GTTCTGTTGGAGCAG TTTGAACTTAAGGACTAAA TAAATGTGAAT TTTAGTTCTTAAGTTTAAA TTTCACATAAATAAT  73 172
        pgaB NONE
        pgaC 1102659 .. 1102672 +  -5.2  -2.50935   GTGCGCGTTGGGTGA               GCCC GGATCG GGGC                ATTCGTGGATGAAAT  51 0
        pgaD 1103206 .. 1103222 + -12.3  -5.82316   CATTTATAAAAGAAA              GCCCACA TCA TGTGGGC              TTTTTTTTCACTAAT 100 45
JCR18_RS05295 1104889 .. 1104901 +  -3.3  -3.90291   AGAAAGCAGAACTTA                GATGC TGG GCAGC                TTTAATTGGGAGAAT  54 8
JCR18_RS05300 1105246 .. 1105260 +  -7.1  -5.53991   AAGAGTACAAAAAAA               GCGAC TTAAC GTCGC               TTTTTTTAATAGATA 100 51
JCR18_RS05310 NONE
JCR18_RS05315 NONE
JCR18_RS05320 NONE
JCR18_RS05325 NONE
JCR18_RS05330 1109757 .. 1109771 +   -10  -2.70525   CCGCCGTCAGGTGAA               GCCTGT GTA ACAGGC               ATTGCTTTACAAGGA  77 16
JCR18_RS05335 NONE
JCR18_RS05340 NONE
JCR18_RS05345 NONE
JCR18_RS05350 NONE
JCR18_RS05355 1114469 .. 1114480 +    -3  -2.96722   TAGATGTCTCGGGTG                GTTT TAAC AAAC                 ATTTATAAATATCAG  43 6
JCR18_RS05360 NONE
JCR18_RS05365 NONE
JCR18_RS05370 NONE
JCR18_RS05375 1119827 .. 1119843 +  -9.4  -5.68438   GCAGTATTAAAAAAA              CCACGC AATCG GCGTGG              TTTTTTATTTAATAA 100 46
         def 1121999 .. 1122019 +    -4  -4.11371   ATATAATTTTAATAT            TATCAGCA GGTTG TGCTGAAA            TTTTGCGCGATGTTG  58 140
JCR18_RS05390 1123361 .. 1123389 +  -6.7  -4.20531   AAAGACTTATAGCGA        CATCGCAGCACTT CTA AACTGCTGAGGTG        TTTTACCTAGATGTC  74 1
JCR18_RS05400 1125475 .. 1125502 + -11.4   -4.8048   TTAAATAAATGAAAA        GACTCTCAGC CATATTCA GCTGAGAGTC         TTTTTAATATGAACA 100 33
JCR18_RS05410 1127311 .. 1127325 +  -5.8  -3.87815   TTGAGCAAATTCAGA               TCATTT AAG AAATGA               TTTCTCAGCCTGACA  64 18
JCR18_RS05420 NONE
JCR18_RS05425 NONE
JCR18_RS05430 NONE
JCR18_RS05435 1132420 .. 1132451 + -10.8  -4.57341   AACTTTCAAATTGAA      AAGGGCGTGATGGG GAAT TCCTTCACGCCCTA       TTTTTAAACAGGGTT 100 49
JCR18_RS05445 1138276 .. 1138293 + -11.3  -5.85425   ATTTAAAAAATTAAA             GCCACTG TTCA CAGTGGC              TTTTTTATTTGTTTA 100 45
JCR18_RS05450 1139770 .. 1139789 + -10.8   -3.6445   TAATTGCACAAAAAA            GCCCAATT CTAA AATTGGGC             TTTCAACGTTATTAT  89 38
        nfuA 1146454 .. 1146466 +  -5.5  -5.88565   AGTGAAATAAAAAAG                CCTCG GAA TGAGG                TTTTTTTATTATACA  91 56
JCR18_RS05485 1148867 .. 1148895 + -17.7  -3.65693   TTTTAATCAATAAAA        TAATAAAGGCGCT TTA AGCGCCTTTATTA        TTTAAAATCTCTAAT 100 35
JCR18_RS05500 1151861 .. 1151887 + -14.6  -2.91582   AGAAAAATTTGAAAC         TAAAAGGTGCCT ATA GGGCACCTTTTA         TGTATGGGTAAGCTA 100 48
JCR18_RS05510 NONE
JCR18_RS05515 1155962 .. 1155974 +  -4.9  -4.32579   GGTTAATCGCCATAA                TCATT AAT AATGA                TTTCTTATCAAGTAT  68 293
        mtgA 1157257 .. 1157280 +    -4  -5.85011   ACCCAGATTCCTGAA          TAACACTGTCT TAA AGAT-GTGTTA          TTTTTTTAGTTTTTA  86 23
        ppk1 1159454 .. 1159484 + -14.2  -3.11999   ATAAAAAATTATTTT       TAAAAAAGCCGACA TCA TGTCGGCTTTTTAA       TTAACTGAATTTCAT 100 37
JCR18_RS05535 1160281 .. 1160296 +    -9  -5.85737   ACAGTAAAATAAAAA              GGAGTC CGAA GACTCC               TTTTTTTATTCATGT 100 34
JCR18_RS05560 1164727 .. 1164742 +  -6.2  -3.25719   ACAGCTTTTCCTGTA              CTTGAT ACAT ATCAAG               TTGCTCGTCTCCTAA  58 217
        lysS 1166902 .. 1166917 +    -9  -5.49234   TTCAATACAGAAAAA              GGCAGT TTAT ACTGCC               TTTTTTATTAACTAT 100 48
JCR18_RS05575 1168538 .. 1168558 +  -5.4  -5.77632   CCTTATAATAAGAAA            GAGAGGCT ACAGA GGCTTCTC            TTTTTTTATGGTTTT  91 52
JCR18_RS05580 NONE
        cysD NONE
        cysN 1171471 .. 1171484 +  -9.5  -5.83226   AATAAGTTCTAAAAA               CCCGC GTAA GCGGG                TTTTTTTATTGAGTT 100 50
JCR18_RS05600 1172813 .. 1172836 +   -14  -4.91109   AATAAAAATAAAAAA          TAAAAGCCCC GATA GGGGCTTTTA           TTTTTATAGTAGAGC 100 57
JCR18_RS05620 1179388 .. 1179427 + -13.8  -3.03243   TCACTAAGAATTGAC  TTCATAAAAAACCCGCTC ATTT GAGCGGGTTTTTTATTTA   TATTGAAAAATAGAT 100 34
JCR18_RS05635 1181561 .. 1181579 +  -3.9   -4.4078   CGATTAAAACCGGTA            TGC-TGCT TTTG AGCACGCA             TTTTGCTTAAAGAAA  62 68
        ureA NONE
JCR18_RS05645 NONE
        ureC NONE
        ureE NONE
JCR18_RS05660 NONE
        ureG NONE
JCR18_RS05670 1186424 .. 1186440 +  -8.7  -5.13741   CTTTGTAGCGAAAAA              GGTAGCT TAA GGCTACC              TTTTTATTCGCTTAC  95 48
JCR18_RS05685 NONE
JCR18_RS05690 NONE
         adk 1191905 .. 1191925 + -12.6  -4.99947   ATTATTTGTAATACC            GAGCCCTC TTTGT GAGGGCTC            TTTTCTTTCATTAAG 100 47
        gdhA 1195300 .. 1195319 + -12.2  -5.21709   ATAGAAATAAAAAAA            TCCGATGC AAAA GCATCGGA             TTTTTTAGTCTAAAA 100 44
         ata 1208301 .. 1208317 + -10.1  -3.14881   TTAAGAAACTGGTTA              GGAGGGC AAT GCTCTCC              TTGCTCGACAGATTA  81 37
JCR18_RS05745 1209139 .. 1209175 + -15.3   -5.0133   TAAAACGGTCTGTCA    CGGCAAAGTAACCATCC TTA GGGTGGTTACTTTTTCG    TTTTTTAAGGAGCTA 100 38
JCR18_RS05755 1210458 .. 1210472 +  -3.6  -4.48583   AATTGATTGGCATTA               TTTAGT TGT GCTAAA               TTTCTTCTGTTAATT  61 78
JCR18_RS05760 NONE
JCR18_RS05765 1211422 .. 1211436 +  -8.5  -3.51235   TTGGTGATTAAAAAA               GCGGC ACTTA GCCGC               TTATGCTGTATGTGC  76 431
JCR18_RS05815 1216935 .. 1216951 + -10.1  -2.55392   TATTAAAAAAGAAAA              CCCACCG TGG TGGTGGG              TAGATTAGATGAATT  77 332
JCR18_RS05845 NONE
JCR18_RS05850 1220152 .. 1220176 +  -6.5  -3.66178   TATTCAAATAAAAAA         CCACTACCTG CTGTAA CAGG-AGTGG          TTTCGCATTCACAAA  64 30
JCR18_RS05855 NONE
JCR18_RS05865 NONE
JCR18_RS05870 NONE
JCR18_RS05875 NONE
JCR18_RS05880 1223165 .. 1223189 +  -2.1  -3.18264   AAATTTGCTGAAAGG          TGGTGCTTGAT GTC ATCAGTCAGCA          TTGCTGAATACCGCA  44 16
JCR18_RS05885 NONE
JCR18_RS05890 NONE
JCR18_RS05895 1224457 .. 1224480 + -10.4  -6.47325   AGTTGAAAAGCTTAG          TCCGTACTTT CCCC AAGGTACGGA           TTTTTTTTATTTTTT 100 208
JCR18_RS05900 1224819 .. 1224840 + -10.9  -5.56112   TTTTTTGTTTTTTGA           CCCGTTTCT TTTT AGAAGCGGG            TTTTTTAATTTTTCT 100 106
JCR18_RS05905 1225643 .. 1225662 +  -8.6  -5.24531   AGTCATAAGGGGAAA            GCCTACTT GAAA GAGTAGGC             TTTTTTATGAGAAAT  95 165
JCR18_RS05915 NONE
JCR18_RS05920 1227772 .. 1227790 + -13.2   -4.7629   ATCAAAAAAGGGGGA             GCTTGCCT ACT AGGCAAGC             TTTTTAAATTGATAA 100 455
JCR18_RS05925 1228489 .. 1228502 +  -9.5  -5.64274   CTCTATTTTTAGCCA               CCGCC TTAG GGCGG                TTTTTTTATGGGTAA 100 52
JCR18_RS05930 NONE
JCR18_RS05935 1229566 .. 1229579 +  -8.1  -5.87688   ACTGCGTAATCAACT               GAGCC GAAT GGCTC                TTTTTTTTGCCTTCT 100 24
JCR18_RS05940 NONE
JCR18_RS05945 1231399 .. 1231414 +    -9  -5.54885   TTCTCGTTAATCAAT              GCACCT TCTC AGGTGC               TTTTTTATTGGTGTT 100 31
JCR18_RS05950 NONE
JCR18_RS05955 NONE
JCR18_RS05960 NONE
JCR18_RS05965 1234304 .. 1234317 +  -8.1  -5.60993   TAATTTTTAACCTTA               GCACC TTCG GGTGC                TTTTTTTGTGAGAAG 100 45
JCR18_RS05970 1234669 .. 1234684 +  -8.2  -5.18357   TTCAATCGAAATTTA              GCGTCC TTAG GGGCGC               TTTTTTAATGCCTTG  93 44
JCR18_RS05975 NONE
JCR18_RS05980 1236499 .. 1236514 +  -7.5  -4.07746   ATCAAATAACAAAAA              GGCGG GTAACA CCGCC               TTATCTTTTTGGAGA  77 32
JCR18_RS05985 1236859 .. 1236869 +  -5.4  -2.79291   AACTTTTAGCATTAA                 TTCC AAA GGAA                 TAATTCATGAGCTTT  53 12
JCR18_RS05990 NONE
JCR18_RS05995 1237619 .. 1237664 +  -4.3  -3.93148   ATGTCAGTTGAGGAA GGTATA-AGCTTGTATTGATTA ATT TAGTTGATTTAAGCTATATACC TATTTTTAAAATACT  58 19
JCR18_RS06000 NONE
JCR18_RS06005 1238200 .. 1238213 +  -8.1  -5.14563   TTGCATAAATTAAAA               CCCAC TTCG GTGGG                TTTTTTAATGGGCGC  93 33
JCR18_RS06010 NONE
JCR18_RS06015 NONE
JCR18_RS06020 NONE
JCR18_RS06025 1239683 .. 1239701 +  -3.2  -2.91924   TCATTTGTGATTACA             TTCTGTTA CAG TAATGGAA             ATTTATAACAAATGG  43 94
JCR18_RS06030 1240300 .. 1240314 +  -7.1  -5.77988   ATGTCTTAATCACTA               CCACC TCATC GGTGG               TTTTTTTATGTCTAT 100 81
JCR18_RS06035 NONE
JCR18_RS06040 1241876 .. 1241892 +  -9.4   -5.4833   GAAACACTTTAATAA              CCCGCT TAAAC AGCGGG              TTTTTTATTGCCTAA 100 29
JCR18_RS06045 1242856 .. 1242889 + -11.9  -3.89614   AATCAACTTATTCAG     TAACAAAGCCTATGG AAAC CCATGGGCTTTTTTA      TTTCTAAAAATTAGA 100 39
JCR18_RS06050 1243906 .. 1243918 +  -7.7    -3.617   ATTCTTTTACTCTTT                CCAAG AAC CTTGG                TGTTTGCTTGTATGT  73 504
JCR18_RS06055 1244206 .. 1244216 +  -5.4  -2.73124   GGTGAATTCTCAGTA                 GTAG TCA CTAC                 ATTTAGAGAGTAGGC  52 2
JCR18_RS06060 1244717 .. 1244730 +  -8.1  -4.65153   TTTATTTGATAGAAA               CCACC TTCG GGTGG                TTTTCCTTTATGTGA  85 46
JCR18_RS06065 NONE
JCR18_RS06070 1245831 .. 1245847 + -12.3   -5.4833   ACTTAAAAAGAACTA              CCCACTC ATT GAGTGGG              TTTTTTATTGCCTAG 100 110
JCR18_RS06075 1250190 .. 1250211 +  -9.5  -4.37067   TCGTACTTAATAATT           TGAACCCTT TTCG GAGGGTTCA            TTTTCATAATATTTA  91 31
JCR18_RS06080 1250915 .. 1250930 +  -6.8   -5.4833   CCTTATTTCATCAAA              CCACCT TTCG GGGTGG               TTTTTTATTACCTGA  93 78
JCR18_RS06085 NONE
JCR18_RS06090 NONE
JCR18_RS06095 NONE
JCR18_RS06100 1255655 .. 1255671 +  -9.4   -5.4833   TTATAAGAACTTTGA              GCACCC AATTC GGGTGC              TTTTTTATTACCTAA 100 44
JCR18_RS06105 1256096 .. 1256109 +  -9.5   -5.1287   TGAAAACAGCTAATG               CCGCC TTCG GGCGG                TTTTTTACATCTGAA 100 28
JCR18_RS06110 1256815 .. 1256832 + -11.3  -3.46534   GCATTATAAAAAAAA             GCCCTGA ATGA TCAGGGC              TATTTAATAAACTTC  90 160
JCR18_RS06115 1259543 .. 1259574 +  -9.6  -4.15565   GTAATAAAAATATAG      TCTTAAAGCCGAAT AATT AATCGGTTTTAAGA       TTTTAAAATAATCAA  90 88
JCR18_RS06120 1261422 .. 1261464 + -12.4  -3.25762   AAATATATTTTTAAT TTATATAAAACGAAGCAA AATAGAC TTGCTTCGTTTTATAAAA TGTATTGGTTCTTTT  90 39
JCR18_RS06155 1265617 .. 1265646 + -11.6  -3.90608   TTGAAATGTTTACAC       CACATCGCC-CAA GCTAA TTGAGGCGATGTG       TTATTGGTTGTATTT  95 9
        pepP NONE
JCR18_RS06165 NONE
JCR18_RS06170 1269611 .. 1269631 +  -9.8  -2.55446   ATTTGACCAATTTGG            CTCTTTGC TAAAT GCAAAGAG            ATTGCTAAATTTCTG  74 144
JCR18_RS06175 1269964 .. 1269981 +  -9.9  -5.45652   GTTAATATTAAAAAA             GCATCAC TTGA GTGATGC              TTTTTTATTGCCCGT 100 36
JCR18_RS06185 1271126 .. 1271162 + -13.4  -4.68424   GCTTAATTTTGATTG   CATAAAAAAGTACCATG TAAG CATGGTACTTTTTT-TG    TTTTTGAATGCATTA 100 35
JCR18_RS06195 1273215 .. 1273244 +  -9.4    -3.967   TGCAAAATTTATGCG       CGGTGATGAC ATAGGCATTG GTCATCACCG        TTTAGTTAATAAATT  86 465
JCR18_RS06210 1274690 .. 1274702 +  -3.4  -4.09739   TTTACTTTGGATTAA                GAGT TCATT ACTC                TTTTGAGCAAATTAA  56 26
JCR18_RS06215 NONE
JCR18_RS06220 1276675 .. 1276704 +  -2.4  -3.79519   AGCCATACATATTGG       TTTTATT-GTGAA TAGAT TTCGCCAATAAAA       TTTCATCATCGCCTT  51 356
JCR18_RS06240 1283710 .. 1283720 +  -2.6  -3.35467   ATTAAAGTGCCTAAT                 TTAT AGA ATAA                 TTAGTACTTTATGCA  44 20
JCR18_RS06245 1285593 .. 1285608 +  -4.8  -3.29461   TAAAGGAAATCCTGT              TATATG GGTT CATATA               TTCTAAAGCGACTTC  54 52
        yejB NONE
JCR18_RS06255 NONE
JCR18_RS06260 1289279 .. 1289292 +  -5.3   -5.9667   TATTTAAATTTTTAA               TGCAA AAAG TTGCA                TTTTTTTATATTTTT  95 79
JCR18_RS06265 1290673 .. 1290701 + -10.5  -4.00476   ATTTCTTAAAGTAAA        GGTACTATTTC TAAGGAT GAAATAGTACC        TTTATGCTCAATTTA  91 43
JCR18_RS06290 1296220 .. 1296237 + -11.3  -5.11033   CTTTAAATAAAAAAA             GCCACCT ATAG AGGTGGC              TTTTTTGACCTTATA 100 46
JCR18_RS06300 NONE
JCR18_RS06305 1300098 .. 1300118 +  -9.7  -5.77988   CGCCAAATTCGAAAA            GCTCCTGTT AAA AGCAGGGGC            TTTTTTTATATCTAT 100 36
JCR18_RS06320 1304202 .. 1304228 +  -5.8  -5.95539   AATTATTTTTTTAAA         GCTAAGTCGCGG TTA TCGGGGTTTAGC         TTTTTTTATTTGGAA 100 56
JCR18_RS06335 1305961 .. 1305976 +  -6.2  -5.26918   TTAATATAAACAAGA              TAGACA AATC TGTCTA               TTTTTTATAAAATAT  84 202
JCR18_RS06340 1309274 .. 1309284 +  -2.6   -3.1552   TGCAATTGAATGAAT                 TAAA GGT TTTA                 TATTGATGGCTAAAG  43 80
JCR18_RS06370 1317435 .. 1317460 + -13.4  -4.96106   AAATGTGATAAAAAA         CACCTGCGTA TACTTC TACGCAGGTG          TTTTTACTATTTATG 100 54
JCR18_RS06380 1319709 .. 1319724 +  -6.2  -2.94532   AATTACTGCCGTCTC              CCTAAA ATTT TTTAGG               ATTTACTATGATTTT  58 68
JCR18_RS06385 NONE
JCR18_RS06390 1322150 .. 1322174 + -14.4  -4.88228   AATTAATTTATAAAA          GCCCACCTTA TTGAT TAAGGTGGGC          TTTTTACTATTAAAT 100 39
JCR18_RS06395 1322847 .. 1322867 + -10.5  -5.56264   ACGTATAGTAAAAAA            GCTGCATAG GGG TTATGCAGC            TTTTTTGTGTTTCAA 100 140
JCR18_RS06400 1324442 .. 1324460 + -10.3  -5.65927   AAGGAAATTATAGAA             GGGTGTG CTTAC CACACCC             TTTTTTCTTTAGATG 100 93
JCR18_RS06405 1325494 .. 1325510 + -10.1  -5.47399   ATCTAAATAAAAAAA              CCGCCTG TGA TAGGCGG              TTTTTTTAACATTGA 100 35
JCR18_RS06415 1326737 .. 1326758 + -10.2  -4.05402   TTAAGCATTAAAGAA           GGCCGATT CTTATA AATCGGCC            TCTTTTTCATTGGAG  90 49
        rnhB 1327815 .. 1327852 + -12.9  -5.03713   CTTTCCGTTTAATAT   AACAGAGCCGCTATA AAAAAAAC TATAGCGGCTCTGTG    TTTTCTTTGATTATT 100 495
         gap 1333404 .. 1333419 +  -6.1  -5.71712   CTACACTAAGAGAAA              TCGGG TGTGTT CCCGA               TTTTTTTATGTGGGG 100 236
JCR18_RS06445 1334639 .. 1334663 +  -2.1  -3.76413   GAAAAGATTTAAACG          CCAGCAGTAAG TTT TTTACTAATGG          TTTCCAATTTTAACA  47 29
JCR18_RS06450 1336038 .. 1336054 + -10.1    -5.626   GCAAAGATAAAAATA              GCCTCCT AAA AGGGGGC              TTTTTTTATACCCTA 100 44
JCR18_RS06455 NONE
JCR18_RS06460 1337381 .. 1337410 + -14.5  -5.00616   TTATAGAACTGATGT       TAAAAACGGATGC TTGA GCATCCGTTTTTG        TTTTTTAAGGAGCAG 100 51
JCR18_RS06485 1341413 .. 1341430 +  -6.3  -5.67063   CCTAAAAAATAAAAA             GCTAACA GTCA TGTTGGC              TTTTTTTATGATAAG  93 56
JCR18_RS06490 1341969 .. 1341985 +  -4.3  -3.64716   CCCCAATGTAAATGA              GGGCCTG TGA CACGTCC              TGTTTTACCGACTAG  56 95
        clpB 1345607 .. 1345628 + -10.3  -5.88197   TGCTAAAACCGAAAA           GAGAATATG GAAA CATATTCTC            TTTTTTTATATTTAA 100 49
JCR18_RS06510 1346790 .. 1346823 + -14.2  -3.11222   AAGAATGTACATGGT     GAAGTTATCATTAC CGTGAA GTAATGATAACTTC      CTTTTCAAATTCAGA 100 2
JCR18_RS06520 1349636 .. 1349665 +  -7.3  -3.89348   AGGTAATCTGAGCAC       GGCTCTAAATT TTCTGGTC AATTTAGGGCC        TTATTCTGTAAAGTT  72 35
JCR18_RS06525 NONE
JCR18_RS06530 1352049 .. 1352073 +   -13  -4.43844   GATATAAAATATAAA          CAGGTAGATC ATAAA GATCTACCTG          TTTTGTAAATACTAG 100 60
JCR18_RS06535 1353678 .. 1353696 + -11.8  -5.61596   TCTAATTTGAAAAAA             GCTTCTCA TTT TGAGAAGC             TTTTTTTATAGAAAT 100 60
JCR18_RS06540 1354684 .. 1354696 +  -3.4  -2.61718   TAAACTCAGTACCTG                CAAG ATAGG CTTG                AGTTTTTGCAAGTTG  43 200
JCR18_RS06555 1358721 .. 1358737 +  -2.3  -2.78237   TATTAGGTAGTGTAA              GTAATTT ATA AATTTAC              GCTTTTTTACAATTA  40 129
JCR18_RS06560 1359441 .. 1359499 + -12.7  -3.36749   TAATTTCATAAGCAA TTTTCAAAAGCATTAAAAAAGCCCCTA AGCAA TAGGGGCTTTTTTAATGCTAAAGCGAA TTAGTGTTGAGCATC 100 30
JCR18_RS06575 NONE
JCR18_RS06580 1362721 .. 1362739 + -13.2   -5.4588   TCATATTCCAGTTGG             GGCCTGTT TTG AACAGGCC             TTTTTTATAATTTTA 100 59
        hrpA NONE
JCR18_RS06600 1369155 .. 1369168 +  -8.1  -5.60993   TAGATTAATTAAAAA               CGCTC GTAA GAGCG                TTTTTTTATGGCACA 100 46
JCR18_RS06640 1378643 .. 1378671 + -13.3  -3.42553   TTTAAATAAGGGAAG        TGCATAGCCTCAA AGG TTGAAGCTATGCA        ATTTTATATCTTATT 100 36
JCR18_RS06650 1381539 .. 1381575 + -11.2  -4.00934   TGCTGAAAATCAACT   TTTGGTTTAAGATCATG ACAG CA-GGTCTTAAACCAAA    TTTAATATTTGAGGT  93 44
        cueR NONE
JCR18_RS06660 1382658 .. 1382672 + -11.4  -5.17353   CAACGTTGCAGAAAA               GCCCGT GAA ACGGGC               TTTTTTAATGCCTAT 100 251
JCR18_RS06675 NONE
JCR18_RS06680 1385678 .. 1385709 +  -8.8  -5.61596   AGTGGTGTTCACTAA      GCCCATTTCTTC AATGAGAA GTAGAAATGGGC       TTTTTTTATGGAAAT 100 203
JCR18_RS06695 1387529 .. 1387561 +  -2.8  -3.24245   ATGCTCTGTGATGTA      CTACTTTTCATGAT ACGAA ATCATGGAAAGCAA      TTAGCTTATAAATAA  44 48
JCR18_RS06700 1387941 .. 1387964 +  -8.2  -5.71712   AATAAAGCGAAAAAA          CCTATCTCTT TTAA ATGAGATAGG           TTTTTTTATATCAAG 100 53
JCR18_RS06710 NONE
JCR18_RS06715 1390314 .. 1390356 + -11.6  -2.67981   TCAGCTTATAAAAAA GCCAACTTGCTAAAGCTAT TGAGTT ATAGCCTTA-CAAGTTGGC TCACTTTCATAAAAT  86 30
JCR18_RS06725 1391815 .. 1391834 +  -2.1  -5.38047   AATATAGTTAAAAAA            CCCAC TTCTTCCTTT GTGGG             TTTTTTATATGGATA  71 112
JCR18_RS06730 1392241 .. 1392263 +    -5  -3.17212   TTAATTACATATTTT           TAACAATTTA GAT TAATTTGTTA           TTCATAAAGTCATAA  52 110
JCR18_RS06735 1393270 .. 1393306 + -10.4  -5.40072   TAGCTGATTACAAAG    TGCCTTCCAAATATTA ACACC TTATATTTGGAAGGTA    TTTTTTTAACCACCA 100 44
JCR18_RS06745 1394525 .. 1394540 +  -8.2  -5.95539   GATAATATTCAGCTA              CCGCCT TCTG GGGCGG               TTTTTTTATTTAACA 100 80
JCR18_RS06750 1395184 .. 1395195 +  -2.2  -2.54896   GAAAAATAAAGTGCA                CCTT TGTA GAGG                 TAACTTACATGAAGA  39 103
JCR18_RS06755 NONE
JCR18_RS06765 1398304 .. 1398322 +  -8.2  -3.53343   ACATGAAGTGCCAGC             GGCTTTGT TGC ATAAAGCC             TTTGACGGCAGAGTT  73 252
JCR18_RS06775 1399713 .. 1399723 +  -5.4  -3.93583   GTGAAATCCCACGCA                 GGAA CAA TTCC                 TTTATGGCTGGATTG  61 197
JCR18_RS06780 1400911 .. 1400932 +  -5.9  -5.16572   AAATGCATTTAAAAA           GCCTAGT ATTAATTA ACTAGGC            TTTTTTAAATTGCAT  83 62
JCR18_RS06785 1402213 .. 1402238 +  -9.1  -4.87318   CAGCCAATAAAAAAA         CCACCTAATTC TTTC GAATTAAGTGG          TTTTTGAATTTTGGA  93 350
JCR18_RS06800 NONE
JCR18_RS06805 1405579 .. 1405594 +    -4  -4.73633   GGTAGGCTATTCCTG              CTCATGG ATA CCA-GAG              TTTTATATATTGTTG  65 60
        lptC NONE
        lptA NONE
        lptB 1407438 .. 1407451 +  -4.5  -6.28401   CTGTTTGGTTAAAAA               GAGGT CAAG GCCTC                TTTTTTTATTTTTTA  95 55
JCR18_RS06825 NONE
JCR18_RS06830 NONE
JCR18_RS06835 1412483 .. 1412499 + -13.7  -5.33866   AAGATAAGAAAAAAA              GCCCCGA AAT TCGGGGC              TTTTTTATAGGTTTG 100 34
JCR18_RS06840 NONE
JCR18_RS06845 NONE
JCR18_RS06850 1414784 .. 1414808 + -12.3  -2.87132   TGAGATTTGCATATA          GTTATCCGCAA ATC TTGTGGATAAC          TATATGGAAAAGCAG  90 41
JCR18_RS06885 1422241 .. 1422256 +  -6.2  -2.72217   GACCGATCAAAAATA              TGAGAT GGGT ATCTCA               TGGGTTCTTTAGCTT  57 92
JCR18_RS06890 1424048 .. 1424062 +    -5  -2.87319   CGGAGCACTCACCAG               TACTGT TTA GCAGTA               GTTTGCTAGATTGAG  51 43
JCR18_RS06895 1425271 .. 1425294 +  -5.9  -4.07885   GAGCACTATCCTTTG          CCTGCTGGC CACATT GCCAGTCGG           TTTTAGCAGGCCGTA  67 203
JCR18_RS06900 1426481 .. 1426497 +  -3.7  -5.09259   ATATTTTTGACTTTG              TGGCGAT AAT ATTGCTA              TTTTATTTTACGCTA  69 185
JCR18_RS06905 1428262 .. 1428275 +  -6.7  -5.10767   TTTTTTCAATATTTG               CGGAT AGAA ATCCG                TTTTTGTCTTGGCTA  85 398
JCR18_RS06925 1431915 .. 1431944 +  -2.8  -5.93252   CAGTTTTTATGAAAG       GCCAAACAGTGC TTTATT GAGGTGTTTGGC        TTTTTTATTTTTGAG  82 43
JCR18_RS06930 1432251 .. 1432266 +  -6.2  -4.41494   TGAGACCGTATTAAT              TTTACC AAAT GGTAAA               TTTTAATTGAAAATA  74 27
JCR18_RS06935 1433020 .. 1433035 +  -8.2  -5.65177   GTTTAAATTCAGCCA              CCGCCT TCTG GGGCGG               TTTTTTTATAAATAT 100 85
JCR18_RS06955 NONE
JCR18_RS06960 NONE
JCR18_RS06965 1444987 .. 1445003 +  -6.7  -3.26298   AGGGTATTCCAAAAT              TAAAAGT AGT ACTTTTA              TATATTTGAAGTACT  63 48
JCR18_RS06970 1445769 .. 1445784 +  -8.2   -3.2048   ATTTATAACGATCAA              CCGTCC TTAA GGGCGG               TTGATGCAATTTACA  71 81
JCR18_RS06975 1447055 .. 1447068 +  -2.5   -4.0371   TATAAAAATCAAAAA               TTTAA AATT TTAAA                TTTCTGTAAAAAGTC  53 172
JCR18_RS06980 NONE
JCR18_RS06985 NONE
JCR18_RS06990 NONE
JCR18_RS06995 NONE
JCR18_RS07000 1453636 .. 1453661 +  -8.3  -4.58685   AATTAATCACTGTAT         TGAAAGCTCGC ATAT GCGGGCTTTAA          TTTTTAGCCCAGTTT  85 204
JCR18_RS07005 1455034 .. 1455044 +  -2.6  -2.63432   AATTGTGCTTGAGGA                 TTTA TGC TAAA                 ATTCATTCAATATAT  40 80
JCR18_RS07010 1455983 .. 1455997 +  -3.6  -3.87994   AAAGATGCTTTATCG               CTATTT GAA GAATAG               TTTGTAAAACTCACT  54 11
JCR18_RS07015 1456595 .. 1456630 +  -4.2  -4.45544   GTATCGCTGTAAAAA    TATTATCTGATTAAGT CGTA ATACAATCAGATAATA     TTTTAATTAATAAAG  62 139
JCR18_RS07025 1458242 .. 1458255 +  -8.1  -5.17353   ACACTAAAATAAAAA               GCCCA TCAC TGGGC                TTTTTTAGTGGGTAT  93 49
JCR18_RS07035 1460155 .. 1460173 +  -6.7  -5.79595   TAATTTCACTCTAGA             GCCTCTT AATAA AAGGGGC             TTTTTTATTTTGAAA 100 55
JCR18_RS07040 NONE
JCR18_RS07045 NONE
         uca 1465464 .. 1465487 + -11.8  -5.59534   TCGCTTAAACTAAAA          GAGAGCATCG ATAT TGATGCTCTC           TTTTTTATTATGCTT 100 33
JCR18_RS07065 1467120 .. 1467141 + -10.1  -5.06414   GGATTAAAAGAGATA           GCCCCATCC CTGT GCATGGGGC            TTTTTCTTGCCCAAA 100 41
JCR18_RS07070 NONE
JCR18_RS07075 NONE
        atzF NONE
JCR18_RS07085 1470701 .. 1470719 + -13.2  -4.87807   TCCATAAAGCAAAAA             GCCCAAGT TGA ACTTGGGC             TTTTTAATGTCTTAC 100 43
        soxR NONE
JCR18_RS07115 1475955 .. 1475972 + -11.3  -5.40072   AGTTCGAACAAGAAG             GCCTGTC AAAA GACAGGC              TTTTTTTAGGCAGCC 100 65
JCR18_RS07120 1477732 .. 1477751 + -10.8   -5.3671   TATCTATAAAAAAAA            GAGGCTAA CGAT TTAGCCTC             TTTTTTACTTCTATT 100 46
JCR18_RS07130 1479803 .. 1479819 + -10.9  -5.90231   TCTTTATCATTTCAA              TTAGGCC AAT GGCCTAA              TTTTTTTGTCTTTAT 100 50
JCR18_RS07135 NONE
JCR18_RS07140 1481971 .. 1481989 +  -3.1  -5.06414   CATCGTTTTATAGGA             GCTGCAT AGATG ATTCAGC             TTTTTATTAACGGCC  67 17
JCR18_RS07145 NONE
JCR18_RS07150 1483475 .. 1483517 +  -3.5  -2.70979   AAATCAAAAATGAAA TGTTCTAGAGTAGAC-AAGT TATA ACTTTGTCCGCTCTAGCTCA TGACTTTGGTTCAAA  44 28
JCR18_RS07155 1484716 .. 1484727 +    -3  -2.95388   AATAAGATAAATAGG                TTTG CGGC CAAA                 TATATCGCTTAAATG  43 472
JCR18_RS07175 1490922 .. 1490950 + -13.9  -4.14392   TGAGTGTTAAAAAAA        TGAGATGGGGACG AGG TGACCCCATCTCA        TTTTAAACATTAAGC 100 31
        paaA NONE
        paaB NONE
        paaC NONE
        paaJ 1495851 .. 1495865 +  -2.9   -3.3054   GACTGTCTTGAGCCT               TTTGA TTACT TCAAA               TGTATTTAAGTCTTT  46 2
        paaK NONE
JCR18_RS07210 NONE
JCR18_RS07215 NONE
JCR18_RS07220 NONE
        pcaF NONE
        paaF NONE
        paaX NONE
JCR18_RS07240 NONE
JCR18_RS07245 1504774 .. 1504808 + -15.2  -4.21607   TAAGCTGGTTATTTT     CCAAAGCTAAGTATGG TTA TCTTACTTAGCTTTGG     TTTATATTAAATAGA 100 103
JCR18_RS07250 NONE
JCR18_RS07255 1506231 .. 1506264 +  -9.9  -2.83737   ATAAGGTATTTAAAA     ATATTAGACAATTAA ATAT TTAATTGTCTAATAA      ATATTTTAAATATTG  79 61
JCR18_RS07270 1509497 .. 1509512 +    -9  -2.71243   TTTACTCATGTCGAT              GCTAGC AAGT GCTAGC               CTGTTCTTCTATGAC  72 11
JCR18_RS07275 1510398 .. 1510412 +  -4.4  -3.59305   AAGAAGTCCTGCGTA               TTTTAT AGG ATAAAA               CTTTTCTTTATAAAT  56 85
JCR18_RS07280 NONE
JCR18_RS07285 1512216 .. 1512232 +  -8.1  -2.53392   TTAAAATAGAATTGA              TTTCTCA AGT TGAGAAA              TCAATTCAGCAATTT  67 135
JCR18_RS07300 NONE
JCR18_RS07305 1514748 .. 1514765 +  -4.9  -4.05788   ATAATGCAATGCAAG             CG-TGGTT GGA AACCAGCG             TTTAATTTGCCACAC  62 3
JCR18_RS07310 NONE
JCR18_RS07315 NONE
JCR18_RS07320 NONE
JCR18_RS07325 NONE
JCR18_RS07330 NONE
JCR18_RS07335 1521174 .. 1521188 +  -5.7  -2.93448   AAATACATTTAAACA               TTCGG GCATA CCGAA               AATTTTTTTAAATTA  56 39
JCR18_RS07340 NONE
JCR18_RS07345 1523162 .. 1523183 +  -8.7  -5.93252   TGAATAATTAAAAAA           GCCTTGTTC AAGT GGACGAGGC            TTTTTTATTTTTAAG 100 51
JCR18_RS07355 1524812 .. 1524847 + -11.5  -2.80991   TTAAAATTATGAGTT    GAAACTCTTG-TATCT CTAAT AGATAACAAGAGTTTC    TAAGTTTATTTAAAT  86 37
        pobA 1527049 .. 1527064 +  -5.4  -5.60993   AAGTAAAAATAAAAA              GGGCAT GAAA ATGCTC               TTTTTTTATAGAAAA  87 46
JCR18_RS07370 1527935 .. 1527950 +  -7.6  -3.36785   AGCATAAAAATGCAA              TCTGGT TTAA ACCAGA               TTAATTAAACTGTCA  69 34
JCR18_RS07375 NONE
JCR18_RS07380 NONE
JCR18_RS07385 1531967 .. 1531980 +  -2.4  -2.76404   GAAGTCAGCAATGGC               GTGA AAGCGC TCAC                TAAGTTTTAGCTAAA  40 9
JCR18_RS07390 1533247 .. 1533262 +  -7.6  -3.37895   TTTACTAGTTTGTCA              TCTGGT TTAA ACCAGA               TTGATGTATATTGAA  71 33
        phnW 1534439 .. 1534449 +  -6.8  -2.62714   AACCACCTAAACCAA                 GCTG TAA CAGC                 ATAATTTTTATTAAA  59 11
JCR18_RS07400 1535323 .. 1535346 + -15.4  -3.06133   CCAATATATTTTTAA          GCTTAGCTCC CTTG GGAGCTAAGC           TTACCTAAAAAATTA 100 53
JCR18_RS07415 1539534 .. 1539587 +  -5.8  -3.79668   GTAGGTGGCTTAGAA GCGGAAGATTAAA-ATTATATTT AAAATCAGA AAATAAAATATTTAATCTTTCGC TTTAATAAGTTAAAT  64 37
JCR18_RS07420 1540578 .. 1540604 + -10.2  -5.10461   GATCCATTTATAAGA         GCCAGCTTTG TTTTTTT CAAGGCTGGC         TTTTTATTGGGTAAG 100 49
JCR18_RS07430 1542648 .. 1542672 + -10.1  -5.09225   TAGCCTATTTTGAGA          TCAGCACAAGT TTT AATTGTGCTGA          TTTTTTGCATCACGT 100 49
JCR18_RS07465 1550714 .. 1550736 +   -15  -3.44622   TAAAAAATCAAATGC           CATGAGGCAT GGG ATGCCTCATG           TTCCTTCTGAGGATA 100 41
JCR18_RS07470 1552036 .. 1552057 +  -7.3  -3.17723   ACCCGCAAAAGGCAG           AGTGACAGA TCAA TCTGTCACC            TTAAATTAAGGATGA  64 21
JCR18_RS07475 NONE
JCR18_RS07480 NONE
JCR18_RS07485 NONE
JCR18_RS07490 1556385 .. 1556403 +  -3.8  -5.01732   GGTGTGAGCCATAGG             TGATGGAG AAA CTTCACCA             TTTTTTAAAGCGGTT  74 412
JCR18_RS07500 1558595 .. 1558633 +  -7.7  -3.36128   TGATAAGTTCTAGAA   TCACTGGGTGAAATT GACATGCGA AATTTTACCTAGTGA   TTAAATTTGTAATTT  69 45
JCR18_RS07505 1559596 .. 1559613 +  -9.9  -5.79595   TGAGCCAATAAAAAA             GTCATCC CTAA GGATGAC              TTTTTTATTTTGAGA 100 46
JCR18_RS07515 1564343 .. 1564362 +  -7.2  -3.72893   AAATAGGGTAGAAAA            TGCTTCTT TTTA AAGAGGCA             TTTAATACAGAAATA  70 103
JCR18_RS07545 NONE
JCR18_RS07550 NONE
JCR18_RS07555 1574577 .. 1574589 +  -4.9  -3.10597   AGGTCTAAAGGAAAA                TTTCA TGA TGAAA                ATTTTAAATACAACG  52 262
JCR18_RS07560 1575873 .. 1575909 +  -6.5  -2.98982   TGATTTTTAAATAAG    CAGCCCCATCATGTGAA GAT TTCACCTGATGGGGGAA    TGATTAATTTTTAAT  59 31
JCR18_RS07570 1578611 .. 1578623 +  -2.7  -4.17048   AAAATTTTTCGAACT                CTATA GTG TGTAG                TTCTTTTAAACAGAG  55 468
JCR18_RS07580 1579594 .. 1579612 +  -8.9  -5.22794   TAGCTTCTTTCAAAA             GCCTACT TTATT AGTAGGC             TTTTTTAATCGTTAT  95 46
JCR18_RS07585 1580284 .. 1580309 +  -8.3  -4.91852   TAATTTTGATGAAAG         GCCTGAC-CTGA TTA TCTGAGTCAGGC         TTTATTTTTAATAAG  90 38
JCR18_RS07590 1581067 .. 1581111 +  -6.6   -3.3761   AAATGATCGACCGCA TCAAAGAACAACTACAAACG ATTAA CGTTGTTGGTTGTTATTTGA GTTTTGTTGGCCAGA  65 512
JCR18_RS07610 1583785 .. 1583809 +  -4.4   -4.5442   TTCCTTATTTAGGTA          CGTTTAAAAA CTAGT TTTATAAACG          TTTTCTACTTCAACC  68 12
        katE 1586008 .. 1586035 + -12.1  -4.93318   CTTAAATAAAAAAAA        GCCCTGAAAGT TTAAAC GCTTTCAGGGC         TTTTTCTAAATTATG 100 36
JCR18_RS07630 1589157 .. 1589193 + -16.9  -4.22535   TAAGCAAACAGTTTT    TGAGAATAAAGGAGGCA TTA TGCCTCCTTTATTTTTA    TTATTTTAAACTTAT 100 38
        umuD 1590360 .. 1590388 +  -3.8   -4.7497   ATATTTATTATTTAA        GTTACCGACCCG AAAAG TGAGTCAGTAAC        TTTTTCCTAAATGAC  68 50
JCR18_RS07650 1591651 .. 1591666 +  -7.6  -5.30155   AGATGTAAAAAAAAA              GAAGCT TTAA AGCTTC               TTTTTTAATTGGTAA  91 47
JCR18_RS07660 NONE
JCR18_RS07665 1597900 .. 1597920 +  -3.3  -3.65827   GCGCATATTAATAGT            TTGGTGCAA GAG TTTCACTAA            TTTAAGTGAAGATTG  52 5
JCR18_RS07670 1598378 .. 1598395 +  -4.8  -6.38492   ATCATTTAATAAAAA             TCGGGC CTTGGT GTCCGA              TTTTTTTTTATTAGT  95 55
JCR18_RS07680 NONE
JCR18_RS07685 NONE
JCR18_RS07690 1600665 .. 1600691 +  -2.4  -3.97674   GAGCGAAAGCTTTCT         TAAATATTTTGT CGT ACTAAATTTTTA         TTATTTGAATCATGA  53 6
JCR18_RS07695 1601592 .. 1601617 +  -9.7  -2.61383   TTTCGATATCGCTAG         AGCAGTGCCTA AAAG TAGGCGCTGCG          ATTCTAAATAAGACT  74 42
JCR18_RS07700 1602677 .. 1602710 +  -4.8  -3.15252   TAGATGAGAAAGTTT     TTTGGTTACTTTTT CCAAAA AAAAAGTAACAGAA      TTAGCTGATTGCTTT  53 178
JCR18_RS07715 1604873 .. 1604890 +  -5.5  -5.19261   GAATCCATAAAAAAA             GACCGCT CGAA AGCAGTC              TTTTTTAATAAATTT  80 461
JCR18_RS07750 1611775 .. 1611798 +  -2.3  -3.06696   GACCGCCATACCAAG          GGAACGCTG CAATAT CAGCGATGC           TATATTCAGAACCAG  42 296
JCR18_RS07770 NONE
JCR18_RS07775 1615573 .. 1615591 +    -6  -3.67558   GCATGCCTTGATCGC             CTGGCT GTAACCA AGCCAG             TTCTTGAGGTATGTA  64 266
JCR18_RS07785 1617557 .. 1617567 +  -3.2  -2.80056   AGCGAATGCCATGTA                 CAGT GTG GCTG                 ATTTAAATAAATAAT  43 1
JCR18_RS07790 1618380 .. 1618390 +  -3.2  -3.22091   AACTGACAACAAAAA                 CGGT CAT ATCG                 TTAATAGCTTGGGCT  46 188
        mdcA 1621471 .. 1621489 +    -3  -3.23216   ATGGCTTATATCAAC             CACCTGCA AAA TTCAGGAG             TTGGTAATGATGGCA  46 0
JCR18_RS07805 NONE
JCR18_RS07810 NONE
JCR18_RS07815 NONE
        mdcE 1624330 .. 1624341 +  -4.4  -2.83747   AAGGTCCGTGAATTA                TTGC GTGA GCAA                 TGGTTATGAAACTTA  49 5
JCR18_RS07825 NONE
        mdcH NONE
        madL 1626358 .. 1626369 +    -3   -3.9461   GAATCGGAGGTAAAG                TTCA TGGT TGAA                 TTATTATTAAAAGAC  52 15
        madM 1627152 .. 1627172 +  -5.4  -3.83378   TAATCAGGCAAAAGA            GCTGTTGT TATTC GCAGCAGC            TTCTATCTTTTAAAG  61 52
JCR18_RS07870 1633765 .. 1633781 +  -2.1  -4.49337   CACAAAAAACAAATT              GCTTAGC AAT GCCATGC              TTTTGATTGGTGTTA  57 20
JCR18_RS07875 1635199 .. 1635228 + -10.9  -4.38412   AATTATAGTTTTAGA       TATTAAGCTGCTA TTTT TAGCGGCTTAATG        TTATTTATATTTTTT 100 40
JCR18_RS07880 1636781 .. 1636797 +  -5.8   -5.2894   GTCTTTAAATAAATA              GCTGGT TAAAT GCCAGC              TTTTATTTTGTCTTT  83 53
JCR18_RS07885 1638442 .. 1638467 + -12.7  -4.14392   ATATCTAGATAAAGA         TAAAGGCCAAC ATCT GTTGGCCTTTG          TTTTAAGAATTAGAA 100 52
        tauA NONE
JCR18_RS07900 NONE
        tauC NONE
        tauD 1643717 .. 1643766 +  -9.5   -2.6583   AATTTCTTTAATTAT TCTTTGTTTCAATTCCAACGCAG CGTT TTGAGTTGGAATTGAAACAGTAA CTGTTTAGCTCATTC  74 39
JCR18_RS07925 1647438 .. 1647449 +    -3  -5.37043   TTCTTTCTGATCTTT                TTGA AAAA TCAA                 TTTTTTATGTCGGCT  78 344
JCR18_RS07935 1648949 .. 1649003 +  -7.8  -4.41616   CAGTACTGATTTAGG TAAAGGTATGTCTAGTATTCAATATT TAAGT GATATT-AATAC-AGATATACCTTTA TTTCTTTAGAACGAT  82 43
JCR18_RS07940 NONE
JCR18_RS07945 1651154 .. 1651178 +  -5.7   -5.1244   GTTTCATTCAAAAAA          GCTAAACGGTG CCA TGCCATTTAGC          TTTTTATATTAATAA  80 44
JCR18_RS07955 1652024 .. 1652042 +  -8.2  -3.39717   AAGATCAGTCTTTCA             TCACGACA ACG TGTTGTGA             TTAATCTTCCTAGAT  73 3
        arsB 1653236 .. 1653251 +  -4.7   -5.4833   AATGACTTTAAAAAG              TGCCT TTATAT AGGCA               TTTTTTATTGCCTAG  82 76
JCR18_RS07970 NONE
JCR18_RS07975 1655374 .. 1655405 +  -8.7  -5.63103   TAGTTTAACCAGTTT      GCCGACCTGCGCT GGGATG AGTTCAGGTTGGC       TTTTTTTGATTGAAG 100 38
        ahpF 1657124 .. 1657147 + -15.4   -5.8096   TAACCTAAAACAAAA          GAGCCAAAGG ATAT CCTTTGGCTC           TTTTTATTTTTTATG 100 45
        msrB NONE
JCR18_RS08030 NONE
JCR18_RS08035 NONE
JCR18_RS08040 1673668 .. 1673678 +  -6.8  -4.91109   AACCAATAGTAAAAA                 CCAG CAT CTGG                 TTTTTGTAATGGAAG  84 288
JCR18_RS08075 1680862 .. 1680880 +  -8.9  -5.37593   TATACATATAAAAAA             GCGAGAT GATCA ATCTCGC             TTTTTTGCTTTAAAC 100 45
JCR18_RS08090 1682755 .. 1682772 +  -8.4  -5.12707   ATTAAATATAAAAAA             GCCCCA ATCTAG TGGGGC              TTTTTTAAGCTTTAA  91 36
JCR18_RS08135 1692400 .. 1692418 +   -11  -6.04324   TTAGTTTTTAAAAAA             GCTCCGAT AAA ATCGGGGC             TTTTTTATTTTTTAA 100 44
JCR18_RS08140 1693837 .. 1693868 +  -8.8  -2.87772   TTTGTCCTAAATTTA      CTTGTGCAGGTGTA AAAA TTCATTTGCACAAG       TGGTCTATTTTCTAA  71 50
JCR18_RS08145 1694739 .. 1694764 +  -2.7  -3.11272   CAGGTTTAGGCTCGG         GAGGAAAAT AATTATGG ATTTTTCTC          TATTGCATAATCCTG  43 15
JCR18_RS08150 NONE
JCR18_RS08155 1696203 .. 1696218 +    -9  -5.76949   TGTGACAATAAAAAA              GAGCCA TGAG TGGCTC               TTTTTTTTACAACTA 100 42
JCR18_RS08165 1698436 .. 1698459 +  -3.2  -3.41024   TCTAACGACGAATAC          TATGACACAT CTCA ATGAGTTATA           TCTTATCTTAAACAA  48 58
JCR18_RS08170 1699564 .. 1699579 + -10.4  -4.55023   ATAAAGTATAAAAAA              CGCACC ATTT GGTGCG               TTTTCTCGTCTTAGG  95 62
JCR18_RS08190 1703096 .. 1703120 + -15.9  -4.36903   TCTAAAGTTAAAAAA          CCCCAAAAACT TAA AGTTTTTGGGG          TTTGTATTTGGTGGG 100 190
JCR18_RS08200 1704814 .. 1704848 +   -16  -4.63675   TAGTCCTGAAATACA     GTAAGAAGCCTATTCA TTA TGAATAGGCTTTTTGC     TTTCTTTAATTTAAT 100 244
JCR18_RS08210 1706618 .. 1706655 +  -9.5  -3.14422   GTAGAAAAATATTAA   TGAGATATCAAAGTATTA TTT TAG-ACTTTGATATCTCG   TCTTAACATTATTTT  76 37
JCR18_RS08230 1710831 .. 1710847 +  -5.1  -2.66822   ATTAATTTTTATTCA              TCAGGAA AAC TTCCTGC              ATCTTCTCTTGCTTG  50 72
JCR18_RS08260 NONE
JCR18_RS08265 1717614 .. 1717631 + -11.3  -4.49644   GTATAAATGAAAAAA             GCCCTGA ATGA TCAGGGC              TTTTCAGTTTTTGCT 100 35
JCR18_RS08280 NONE
JCR18_RS08290 NONE
JCR18_RS08295 1723447 .. 1723458 +  -2.2  -3.65902   CATCCAGTTAACCAG                CCTA CTTG TGGG                 TTTACATCCCATCCC  49 233
JCR18_RS08305 1725111 .. 1725137 + -18.2  -5.04601   TCTATTATACAAAAA         GGGCCTAAATCT AAA AGATTTAGGCCC         TTTTTAATTTATAAC 100 45
JCR18_RS08315 1725937 .. 1725954 + -12.7    -4.371   AAAAATAATAAAAAA             GCCCGCT GAAG AGCGGGC              TTTTAATATAATCAG 100 115
         tkt 1729670 .. 1729687 + -10.5    -5.626   TGAGCAGAATAAAAA             GCGTCCC GATT GGGGCGC              TTTTTTTATGAGCTA 100 46
JCR18_RS08335 1730937 .. 1730953 + -10.9  -5.28481   AAGTTTTCTAAAAAA              GTCCTCA ACT TGAGGAC              TTTTTTAATTAGATA 100 46
JCR18_RS08345 1732496 .. 1732512 +    -8  -4.90266   GTAAAATATAAAAAA              GCCAGT ACAAG ACTGGC              TTTTTAATTAATGAA  90 37
JCR18_RS08370 1739133 .. 1739146 +  -9.5   -4.7923   ACTAAAAATAAATAA               GGGGC CGAA GCCCC                TTTGTTTATTTCAAT 100 26
JCR18_RS08445 1754131 .. 1754150 + -10.8  -4.90266   ATATTGAAATAAGAA            GGGATTGA GTTA TCAATCCC             TTTTTCATTGATAAG 100 49
JCR18_RS08450 1754497 .. 1754514 + -11.3  -5.78622   TTTTTTGTTAAAAAT             TCCCTGC AAAT GCAGGGA              TTTTTTTTGAAATAC 100 48
JCR18_RS08455 1755661 .. 1755680 + -10.8   -5.1675   TCTGATTTATAGAAA            CCGGTTAT TCAT ATAACCGG             TTTTTTAATGGCTGG 100 53
JCR18_RS08470 NONE
JCR18_RS08475 1761398 .. 1761410 +  -2.7  -3.93984   GTTTTAAATTTTACT                TAGAT GTT ATCTG                TTTATGCATCCGTTT  51 97
        rsmG NONE
JCR18_RS08485 NONE
JCR18_RS08490 NONE
JCR18_RS08495 1764402 .. 1764414 +  -3.3  -2.51133   TCAGTCATGCAAGAA                CATCG CCG CGTTG                GTTGATGGGTAGATC  44 8
JCR18_RS08500 1764840 .. 1764850 +  -3.2  -4.88067   ATTAGTACCAAAGTT                 CCTT CTA GAGG                 TTTTTCTGAGTGAAT  65 2
        msbA NONE
JCR18_RS08510 NONE
        kdsB NONE
JCR18_RS08520 NONE
JCR18_RS08525 NONE
JCR18_RS08530 1770494 .. 1770507 +  -2.5  -2.58249   ATTTTGAAAATTTAC               TTAAA GCGA TTTAA                CTTATAGAAACTATA  40 12
JCR18_RS08535 NONE
JCR18_RS08540 NONE
        gspI NONE
        gspJ 1772765 .. 1772778 +  -3.1  -2.80016   CAGGGTGACTTATCG               CTTTC GCAG GAAGG                TAATTCATAATGGCC  43 2
        gspK 1773808 .. 1773820 +  -4.1  -2.88427   ATTAATAAAAGGGAT                GAGGT CAT ACTTC                TGTATAGGCAGTATT  47 86
JCR18_RS08560 1774551 .. 1774580 +  -8.1  -3.90741   TTTCATAATCCGCAT       GTTAACTTACA AGTAGAAG TGTAAGTTAAC        TTCCTTTTGTTTGTA  77 2
         ung NONE
JCR18_RS08570 NONE
        tadA 1777005 .. 1777016 +    -3  -4.46112   CACACTAACGCCGTT                TCAT TGAC ATGA                 TTTATTTAAATAAGG  60 61
JCR18_RS08580 NONE
JCR18_RS08585 1778205 .. 1778216 +  -4.4  -3.16151   CGCATAGCTTGATCA                GTCT ATAA AGAC                 TATGTTGATACTTAA  50 54
        rpsA 1780016 .. 1780048 + -17.2  -4.78848   ACAAATTACTGTAAA      CGGTAGCGTAGTAT TCAAC ATACTGCGCTACCG      TTTTGTATTTAAACA 100 87
JCR18_RS08595 1780428 .. 1780438 +  -3.2  -2.67713   AATAAAACTCATAAG                 TGGG GTG CCTA                 TGCGTTATATTCTAA  42 40
JCR18_RS08600 1780810 .. 1780841 + -11.9   -4.3487   CCTTTATAATTTTGG      TACTACTCTTTAT CTAGTC ATAAAGAGTAGTA       TTTTCCCTTCTATAT 100 32
        pyrF 1781730 .. 1781760 + -11.2  -3.70019   TAAGCCGCTCATCAT       GGCATGTGGTACAT AAT GTGTGCCACATGAC       TGTTTTACCATTGCT  88 88
JCR18_RS08620 1785312 .. 1785322 +  -5.4  -3.21218   GAAAAGAGTTTTACT                 GAGT GTA ACTC                 TTGATGCTAAAAGCT  56 24
JCR18_RS08625 1786557 .. 1786574 +  -8.4  -5.40072   AATCAGATATGAAGA             GCGCTC TAGATT GAGCGC              TTTTTTTACAACAAA 100 43
JCR18_RS08630 1789096 .. 1789109 +  -8.1  -5.80951   CCTATTATAAAAAAA               GCCTC TTCG GAGGC                TTTTTTATTTTCGGT 100 47
JCR18_RS08635 1789742 .. 1789761 +    -5  -3.64773   CCTAAACGCTGTGCC            GTAGCCAT GACC ATCGCTAC             ATTTTTATATTCAGC  58 141
JCR18_RS08670 NONE
JCR18_RS08675 NONE
JCR18_RS08680 1801432 .. 1801443 +    -3    -3.409   ATAAGGAATTATCAC                TATG CTGG CATA                 TGTTATTCGGCGTTT  48 37
JCR18_RS08685 NONE
JCR18_RS08690 NONE
JCR18_RS08695 1805286 .. 1805301 +    -9  -5.41941   AGTTATGTCGTTAAA              GGCACT TTTA AGTGCC               TTTTTATTTGGTTTA 100 47
JCR18_RS08700 1806046 .. 1806076 +   -15  -4.02719   ACTGCATTGGAGTTA       GGTTATTGGCTTAA TTT TTAAGTCAATAACC       TTTGATATTTAATCA 100 40
JCR18_RS08710 NONE
JCR18_RS08715 1808439 .. 1808450 +  -7.2  -5.49729   TAGACAATAAAAAAA                GCCC TGTT GGGC                 TTTTTTTACATGCTT 100 52
JCR18_RS08725 NONE
        rraA NONE
JCR18_RS08735 1810968 .. 1810989 +  -9.5  -4.07568   CACGCTAGAGCGCTA           GAGATTGAG ATAA CTCAGTCTC            TTTTAAGAAGCGACA  86 58
JCR18_RS08740 1812045 .. 1812069 +  -9.4  -2.95091   AAATAAACTTAGATG          GTAGAGGTGA GTAGA TTACCTCTAC          TATATAAATTGAAAT  75 49
JCR18_RS08745 NONE
         mfd 1816110 .. 1816158 + -12.2  -3.08699   GTTTTGTTGTAATCG GATTTTATGCAC-TATTTATACC TTGA GATATGAATAAGTGCATAAAATC ATTGTTATTTGTAAG  90 81
JCR18_RS08755 NONE
JCR18_RS08760 1818229 .. 1818242 +  -8.1  -6.01369   TATATAAATAAAAAA               GCTGC CTAA GCAGC                TTTTTTTATTATTTA 100 43
JCR18_RS08805 NONE
JCR18_RS08810 1825498 .. 1825515 +  -9.8  -5.45652   TTTAAGATGATTAAA             CGCGCC AATATA GGCGCG              TTTTTTATTAAAAAT 100 44
JCR18_RS08815 1827485 .. 1827518 + -17.1  -3.16921   CAAATAAAATCTATG     TAATAAAAAAAGCGC TTCG GCGCTTTTTTTATTA      TTCATCGAGATTAGT 100 34
JCR18_RS08825 1829905 .. 1829928 +   -14  -5.26119   TCCTGAAATACCGAA          CCCTCTAATC ATGT GATTAGAGGG           TTTTATTTTTGCCGA 100 54
        ybaK 1835603 .. 1835631 +  -3.3  -5.00616   AAATATGATTAAGCA        GTTGTTTTTAACA AAT TGTTAAAAAGAAA        TTTTTTAAAACAAAA  69 325
JCR18_RS08855 NONE
JCR18_RS08860 NONE
JCR18_RS08865 NONE
JCR18_RS08870 NONE
JCR18_RS08875 1844128 .. 1844142 +  -2.8  -4.13767   TTGTTAGTGATATCT               GACG ATGAATA CGTC               TTTTAAAATACAGGC  53 34
JCR18_RS08880 NONE
JCR18_RS08885 1845500 .. 1845512 +  -3.5  -2.90161   CATAGATGACTATTA                TTTTT AAT AAAAA                TCATTCTCATTAATG  45 19
JCR18_RS08890 1847925 .. 1847951 +  -8.1  -3.66378   ATGCAACTAACGAAA         GAGATACCTGT ATAGA GCAGGTATTTC         TTTCAATCAAATCTG  75 40
JCR18_RS08895 NONE
JCR18_RS08900 NONE
JCR18_RS08905 1850123 .. 1850135 +  -4.1  -3.22388   CGTTGCAATTATTTT                CTCGA TTG TTGAG                TTGGTACCTTAAATA  49 1
JCR18_RS08910 1851010 .. 1851044 + -11.6  -2.72463   CATAAAAAGAAGAAG     CAAAAGTAGCACGC GAGGAAG GCTTGCTACTTTTG     TGCTTAAAACTCAGT  86 133
JCR18_RS08915 1853364 .. 1853381 +  -2.1   -3.0449   AATACCAAAACTACA             TCAAATCA ATA TG-TTTGA             GTTTGCTTATTGAAT  42 8
JCR18_RS08920 NONE
        cobU NONE
        cobT NONE
JCR18_RS08935 1856344 .. 1856366 +  -3.4  -4.48713   TAATAGAACTGTCAT           TGCTAGTATC TAA GCTATTGGCA           TTTCTTATTAATCAC  61 101
JCR18_RS08940 1857986 .. 1858009 +  -9.7  -5.48514   TTTTGAAGTCTTTAA          TGGGAATAG GGATTG CTATTCCCA           TTTTTATTTCTTCAT 100 50
JCR18_RS08945 1858842 .. 1858860 + -10.3  -3.70676   CAATAAAATAAAAAA             GCCCTCA AAAAA TGAGGGC             TTAATTTTCAATCTC  87 56
        lpxB 1866827 .. 1866838 +    -3  -3.67564   AGATCCGGTTCAAGC                CATT TTGC AATG                 TTTGAATAGCTAATT  50 1
JCR18_RS08990 NONE
JCR18_RS08995 NONE
JCR18_RS09000 NONE
JCR18_RS09005 1872661 .. 1872678 +  -5.5  -5.09225   TATATTGATTAAAAA             GCCCCAT TTTT ATGAGGC              TTTTTTAAATCGACT  76 42
JCR18_RS09015 1874043 .. 1874056 +  -3.1  -3.14463   GCAAATCCAGAAAAT               TGGAA TAAA TTCCG                TTGGTAAAAGACCTT  45 5
JCR18_RS09020 1874772 .. 1874791 + -10.8  -5.14563   ATAAATTTTTTAAAA            GCCGATAT AAAA ATATCGGC             TTTTTTGATAGCACA 100 44
JCR18_RS09040 1877602 .. 1877619 +  -2.1   -3.6872   AGTTCTTAAAATATT             TTGAATA ACCC TATTTAA              CTTTTTATATATTTT  47 18
JCR18_RS09045 1878059 .. 1878077 +   -11  -5.90231   ATCAAAAAGGGTAAA             GCCTGCTT ACA AAGCGGGC             TTTTTTTGTATTTAT 100 144
JCR18_RS09050 1878773 .. 1878787 +  -2.7  -4.57569   CTATTTAGCATAAAA               CCACC ATTTA GGGGG               TTTTTAAAAAGATAA  60 135
JCR18_RS09055 1879251 .. 1879264 +  -8.1   -5.7946   CCTTACATAAAAAAA               CCACC ATAT GGTGG                TTTTTTTATTAAGAA 100 60
JCR18_RS09060 1880206 .. 1880222 +  -9.4  -5.28176   AAGCGTTAGATAAAA              GCCCTC ATATA GAGGGC              TTTTTTATGCCTAAA 100 73
JCR18_RS09070 1882671 .. 1882692 + -10.2  -4.07246   ATATCTAAGAATTAA           GCCACACT CATTTT AGTGTGGC            TTTACTTTAAGATAA  90 51
JCR18_RS09075 1883178 .. 1883200 +  -2.1  -3.58343   CATTAATTTATTGTG           TCAGAATTG CGGAT TAATTTTGA           TTTAAACGTACTGAC  47 144
JCR18_RS09080 NONE
        recR 1884283 .. 1884316 +  -4.9  -4.56597   GGTGCTTATTTCAAA     GATTTTTTGAATAATA TCG TATTA-TCTAAAAATC     TTTTTAAAAGACAAA  69 48
JCR18_RS09090 1885812 .. 1885832 +  -7.7  -5.41941   AAAATCATTTAATAA            GTTAGTCTT TAT AAGATTAAC            TTTTTGTTTAGTTTG 100 147
JCR18_RS09095 1886478 .. 1886495 +  -4.8  -5.47914   TTTGTTCAATGAAAA             CGCTCA TGGTTT TGGGCG              TTTTTTATAATTTTT  82 44
JCR18_RS09100 1887378 .. 1887388 +  -2.6  -4.38712   ATTGTTTTTAAAATG                 TAAA ATT TTTA                 TTTTATAAAAGTCGA  58 472
JCR18_RS09110 NONE
JCR18_RS09115 NONE
JCR18_RS09120 NONE
JCR18_RS09125 NONE
        trpB 1891640 .. 1891661 +  -2.2  -5.86976   AAAAATACTTAAAGA           GTGGCC CATTTTGAAA GGCCGC            TTTTTTATTTTATAG  78 44
        prmB NONE
        aroC 1893993 .. 1894016 +  -9.7   -5.0432   CAGCGTATTTAAAAA          GCCACATAA ACAAAA TTATGTGGC           TTTTCTATTTTTATT 100 52
JCR18_RS09150 1896375 .. 1896409 + -11.7  -4.63486   GCTTGATCTCATCTT     AAAAAGGGAGAATAT TCTAC ATATTCTCCCTTTTA     TTTTATTCAAGCAAT 100 35
JCR18_RS09165 1900002 .. 1900013 +  -2.2  -3.13522   GAACAACTCCTTACT                GACG TCTA TGTC                 TCTTACTAAAGGAAT  42 5
JCR18_RS09170 NONE
JCR18_RS09175 NONE
        lpdA 1904002 .. 1904016 +  -7.2  -3.55622   AACGAGCGATTCATA               TGTAGA AAT TCTACA               TTTACAGGAGTTGAA  68 21
JCR18_RS09185 NONE
JCR18_RS09190 1905931 .. 1905946 +    -9  -5.46657   TAAGCCTATAAAAAA              GAGCGA ATCA TCGCTC               TTTTTTATTAAAGTA 100 50
JCR18_RS09205 NONE
JCR18_RS09210 1911026 .. 1911038 +  -3.5  -2.70298   GCAATTTTAGGCTTT                TAATA TGT TATTA                CTTGTCGTTGAAGGC  44 293
JCR18_RS09215 1911900 .. 1911914 +  -4.4  -4.57569   TCTTTGGAAAATTGA               TTTAAA CCA TTTAAA               TTTTTGAGAAAGTGA  68 104
JCR18_RS09220 1912960 .. 1912977 +  -8.4  -3.38191   TGATTTATAAAAAAA             GCAGGC TTTTAT GCCTGC              TTCTCACAATTTTTT  73 50
JCR18_RS09230 1914934 .. 1914950 +  -8.7  -3.03243   ATTGGTTTCTCCTGA              GCTGCGT CAA ATGCAGC              TCTTGCCGCATCAAT  67 53
JCR18_RS09240 1916014 .. 1916039 + -13.4  -2.81326   TTAAAAATATAAATA         GCCGAACAGT AAAGGA ACTGTTCGGC          CTTATTGAGATTATG 100 37
JCR18_RS09250 NONE
JCR18_RS09255 NONE
JCR18_RS09260 NONE
JCR18_RS09265 NONE
JCR18_RS09270 NONE
JCR18_RS09275 NONE
JCR18_RS09280 NONE
JCR18_RS09285 1924891 .. 1924919 + -13.3  -3.03624   TGCTAAGAGCTAAAA        GATGCCTTCTG CTTGGGA CAGAAGGCATC        TCATTTAATTAATGA 100 28
JCR18_RS09295 1928961 .. 1928977 + -10.9  -5.95539   GAAGAAATAAAAAAA              GGAGCTT TAT AAGCTCC              TTTTTTTATTTCAGG 100 49
JCR18_RS09305 1931007 .. 1931033 +  -3.8  -3.11584   CCTACTGCATCGTAT         CAATAATTTAGG CAT TCAAGATTATTG         TCTGTTAAATAATCT  48 20
JCR18_RS09310 1931714 .. 1931740 +  -8.1  -5.64274   TTGAAACAGTTTACA        GTCCGCATTCTT CCCC AAGG-TGCGGAC         TTTTTTTATCAATAA 100 414
JCR18_RS09315 1933129 .. 1933139 +  -2.6   -3.6682   TAAATTCTTTGATAA                 TTTA GAG TAAA                 TTTCAATAAGTCAAA  48 155
JCR18_RS09320 1934146 .. 1934185 + -12.5  -4.30448   TAAAAGTTTTAATTA  TAAAAAGAAGATGTAAG AAAATC CTTACATCTTCTTTTAA   TTTTAAATTAAATTT 100 38
JCR18_RS09350 1940343 .. 1940355 +  -3.5  -4.25104   AAACAATAATATTTT                TTTAA TAA TTAAA                TTTTACTAAGAGAGC  58 198
JCR18_RS09355 1941979 .. 1941992 +  -2.4  -3.96216   AGTGATTACGGTCTT               TACC GTAACA GGTA                TTGTTTAAATCAGCA  53 4
JCR18_RS09360 1942852 .. 1942880 +  -8.9  -2.80612   TACACGACAAATTTC        ACAGAACCCTTAT CCT ATCAGGGTTCTGC        CTTCTTAAAATTGCC  73 58
JCR18_RS09370 1945343 .. 1945364 + -10.3  -5.72622   TTCCAAATAAAAAAA           CTGATTTAG GCAA CTAAATCAG            TTTTTTATTTATCGA 100 50
JCR18_RS09380 NONE
JCR18_RS09385 1949100 .. 1949114 +  -2.8  -3.04517   GCTATTCCACGTTTA               GCTG AATAGCA CAGC               GTTTTAAAAGCACAT  43 17
JCR18_RS09390 NONE
JCR18_RS09395 1950960 .. 1950980 +  -7.6  -5.60993   ATTAATTCACCACAA            TCACGATC AATCC GGTCGTGA            TTTTTTTATAGGAAA 100 36
JCR18_RS09400 1951955 .. 1952000 +  -9.4  -5.37593   ATCATTTTTAAGTCA TAAAAAAAAGCCTTTTATAT CAACAA ATATAAAAGGCTTTTATCTA TTTTTTAATTTAAGA 100 30
JCR18_RS09425 1957036 .. 1957055 +  -3.6   -4.6038   AAGGTTAAGATAAAA            GATTGCAT AACG ATGAAATC             TTTTGATTTGGTATA  63 33
        modA 1957985 .. 1958001 +  -3.7  -3.00574   ATGGCTTTAGCGTGT              TGGCT CCAGTCA AGCCA              TGATGTTTTCTCTAA  46 6
        modB NONE
JCR18_RS09440 1959360 .. 1959375 +  -3.3  -2.58544   AACTTACGAGAGTCG              GAGTT ATAGAG AACTC               ATTCTGAGCCTGCGG  44 67
JCR18_RS09445 NONE
JCR18_RS09450 1961219 .. 1961235 +  -8.7  -4.99035   TTTAAGATATAAAGA              GCAGGTC ATT GATCTGC              TTTTTATATGGGTCG  95 82
JCR18_RS09455 1962116 .. 1962142 +   -11  -2.66602   AAACTGTTATAAAAA         TAAAGGACAGCA TCA TACTGTCCTTTA         TGCATTCTTAAATGA  82 50
        ppk1 1966329 .. 1966357 +  -8.9  -4.18697   CTGGGTAAGGCATAA        GTCATAACAGAAC ATT GACCTGTTATGAC        TTTTCAAATGCTTTT  88 33
        pqqA 1966638 .. 1966672 +   -13  -3.97388   TTTCTATTCAAATCT     GTCATAAGCCCTAG TCTTGTT CTAGGGCTTATGTC     TTTCTAATAAGATAT 100 44
        pqqB NONE
        pqqC NONE
        pqqD NONE
        pqqE NONE
JCR18_RS09495 1971046 .. 1971078 + -10.7  -5.18643   AGTGGTTTTCACTTA      CGCTCATTTCTTTTT GAG AAGTAGAAATGGGCG      TTTTCTTTTGCTTAA 100 197
JCR18_RS09500 1972162 .. 1972193 + -13.2  -2.70979   TAAAATTAGAAATGA      TTGAGGCGAAAC AACTAAAC GTTTCGCCTCAA       TACATTTAATTAAGA 100 66
JCR18_RS09505 1972999 .. 1973023 +  -5.8  -3.78409   GTTGGCTTGGTAATC          TAGCCAAG TAATTTGGC CTTGGCTA          TTTAGCTTAAGTTGA  60 148
JCR18_RS09515 1975408 .. 1975423 +  -8.2  -5.31456   GTTAAAATTCAGCAA              CCGCCT TTTG GGGCGG               TTTTTTGTGGCTTAA  93 89
JCR18_RS09520 1976562 .. 1976586 +  -3.6  -4.56093   ATACTGAACTATAAA          GAACTGCT TTGGTTATT GGCAGTTC          TTTTATACTTAAATT  63 65
JCR18_RS09530 1979851 .. 1979884 +  -8.4  -5.52384   TAAGAGAAGTAATCT     GATAGAAAACCTCTT CACTT AGGAGGTTTTCT-TC     TTTTTTTAGTACAGG 100 59
JCR18_RS09535 1981170 .. 1981186 +  -9.4  -4.93318   AAATGAAATAAAAAA              GGGCTG TGATT CAGCCC              TTTTTATGACTTATA 100 39
JCR18_RS09560 1987759 .. 1987775 +  -5.1  -3.54051   TTTAAGAAGGCAGAA              CCCTGAT AGG ATAAGGG              TTCTGTGAAATTTGT  56 1
JCR18_RS09595 NONE
JCR18_RS09600 NONE
JCR18_RS09605 NONE
JCR18_RS09610 1999935 .. 1999965 +  -3.3  -5.42259   CATCTAAAGCAAAAA       TAAGCTGATTTGG AATAC CTCTATCAGCTTA       TTTTTTTAAGAGTGA  76 65
        adeR NONE
        adeS 2007835 .. 2007845 +  -2.6  -5.04325   TAACCTAACCAAGAT                 TTAT AAA ATAA                 TTTTTATAATTTAAA  66 107
       adeT1 2008924 .. 2008950 +   -11  -3.15252   TGTATAGACTTAAAA         GGTAGAACCTAT AGT ATAAGTTCTACC         TTAACTCATTCATTT  84 77
JCR18_RS09650 NONE
JCR18_RS09655 NONE
JCR18_RS09660 2012868 .. 2012891 +  -7.5  -4.56702   TTAAATCTTTTAAAA          CACGGATGT TTTGAT ATATCCGTG           TTTATTTAATTAGCA  82 37
JCR18_RS09670 NONE
JCR18_RS09675 2015020 .. 2015037 +  -6.9    -4.788   AAATTTAAATGAAAA             GCCCCGA ATAT TCAGGGC              TTTTTAAATTGCTTT  83 39
JCR18_RS09700 2019454 .. 2019476 +  -6.3  -5.61881   TAAGTTGAGATAAAA           GACAACGAA ATAAA TCCGTTGTC           TTTTTATTTTTAAGA  93 28
JCR18_RS09710 2021135 .. 2021173 +  -8.2  -3.54902   CCAATCCAAGCCCAA   GGAGTAAAACCAATAAAC AAC GTTTCATGGTCTTGCTCC   TTACTTGTTAAATAA  73 152
JCR18_RS09840 2046937 .. 2046953 +  -2.3  -4.55826   ACGCCCGATAAGCAA              TCGTA CCAATAA TACGA              TTTTGGTCTTTTACC  61 307
JCR18_RS09880 2054239 .. 2054253 +  -2.8  -3.02166   CACTCACGGTTGCAA               TAGTAG ATG CGACTA               TCATTTGATTGACGA  43 453
JCR18_RS09905 2059616 .. 2059631 +  -2.6  -2.80935   GTATTATCGATCGGT              TGAATT GCAA GATTCA               TCTGGTAAATAAACT  42 48
JCR18_RS09910 NONE
JCR18_RS09915 2063067 .. 2063097 + -14.3  -2.68356   AAGCGATCTAAAAAA       TAAAAAGAGACCA CAAGT TGGTCTCTTTTTA       CTTCTACATTTAGGT 100 30
JCR18_RS09925 NONE
JCR18_RS09930 2066622 .. 2066640 +  -8.9  -5.07011   ATAATTAAGAAAAAA             GAGACCA TTCAC TGGTCTC             TTTTTAGTTTCTATG  95 57
JCR18_RS09955 2075355 .. 2075370 +  -3.3  -2.95081   ACTCAATAGCTAAAT              GAAAC TCAATT GTTTC               TAATATTTTAGATGC  45 28
JCR18_RS09960 2076761 .. 2076780 +  -7.8   -3.6849   AGTATAAATAAGAAA            GGGGCTAA ATCA TGAGCCCC             TTCTTGACATTAAAT  73 43
JCR18_RS09980 2079661 .. 2079696 + -11.4  -2.94218   GTTTTCTTATCAATG    CCAGCAAAGTAT-TCCA ATA TCGACATACTTTGCTGG    TGTCTCATCAGAGAT  86 40
JCR18_RS09990 2082372 .. 2082384 +  -4.9  -2.57132   ATTAATTAATTGTTA                TTTCA TAA TGAAA                ATTATCAGCCAAACC  50 132
JCR18_RS10000 NONE
JCR18_RS10005 NONE
JCR18_RS10010 2086689 .. 2086707 +    -6  -5.42514   AAGATTTAATCAAAA             GAGACC CATTGAT GGTCTC             TTTTTTAATTTATAA  86 54
JCR18_RS10040 2099172 .. 2099203 +  -6.7  -3.26649   ATTTTTATTAGTTAA      TCGCTT-CACTCAT TTTAT ATGGGTGTGAGCGA      TTAATATAAAAATAT  63 40
JCR18_RS10045 2100525 .. 2100542 +  -2.1  -4.55209   CATGAGTCACGAGTT             CTA-CAAT TCT ATTGGTAG             TTTCTTTACTATCTA  61 450
JCR18_RS10065 NONE
JCR18_RS10070 2105939 .. 2105960 + -13.1  -4.88918   AATTTTTAATCTTTT           GTACCTCCT TTTA AGGAGGTAC            TTTTATTTAAAATAA 100 59
JCR18_RS10075 2106667 .. 2106687 + -10.5  -4.68424   CAATATAGATTAAAG            TAAGGATGC ACG GCGTCCTTA            TTTTTGAATGGATTA  95 33
JCR18_RS10080 2107968 .. 2107988 + -12.7  -4.08144   ATTATTGACTTAAAA            CACAGACTA CAT TAGTCTGTG            TTTATAGTTGATCAA 100 176
JCR18_RS10085 2108621 .. 2108649 +  -3.9  -2.54896   TCCGTTTTAAACGCC        TTCTCAGATTTTT TCG GACAATCAGAGAA        TGGATTCGCTCACCC  45 82
JCR18_RS10090 2109963 .. 2109999 + -10.3  -4.35044   TCCATTTATTTAAAA    CCCTAAAAGCAAGCC CATCGCT GTTTTGCTTTTAGGG    TTTATATTTGAATCA  95 60
JCR18_RS10100 2111388 .. 2111414 +  -8.1  -5.72616   CATAAATTTAAAAAA         CGAATTACAGA ATTAA TCAGTAATTCG         TTTTTTTATATACAT 100 132
JCR18_RS10125 2116388 .. 2116423 +   -18  -3.67564   TAATTAATGTAAATC    TTATAAAGAAAGCATG TCAT CATGCTTTCTTTATAA     TTTACCTGAATCATT 100 57
JCR18_RS10130 2117386 .. 2117414 + -14.8  -5.30155   AATATTTTAAAAAAA        GAGAACCAGAAT TTTAT ATTCTGGTTCTC        TTTTTTAATTCATAA 100 49
JCR18_RS10135 2118612 .. 2118649 +  -9.3  -3.04244   AAAAAATAATTTTAA   AG-AGCCCTTTCTACTTA TTA TAAGAAGAAAGGGCTACG   ATTATTTCTACCATA  74 32
JCR18_RS10150 2122829 .. 2122849 +  -4.8  -3.71804   TAATCATCAGTCAGT            TAGCTTAG GATCG TTAAGCTA            TGTTTTGAGGTTTAA  58 38
JCR18_RS10155 2124325 .. 2124360 + -10.6  -3.91352   AATTATTTTTCATCC    TAAGCGGGATTGCGCAC TCA GT-CTCAATTCCGCTTA    TTTAATTAACAATAT  89 39
JCR18_RS10160 2125399 .. 2125416 +  -9.9  -5.30155   ACTGAAAGTAAAAAA             GACCAGT TAAT ACTGGTC              TTTTTTACTTAATAA 100 43
JCR18_RS10225 2141178 .. 2141201 +  -6.1  -2.89683   TATTCTTGAAAAAGA          TGATCTTGT TAAAAC ACAAGGTCA           TCTATACCATAGGAT  58 45
JCR18_RS10230 2142214 .. 2142224 +  -5.4  -5.04356   TATCCTGAAAATTAG                 CTTC TGA GAAG                 TTTTTAATTCTTTCA  81 281
JCR18_RS10245 NONE
        catC NONE
        catA 2146428 .. 2146461 + -10.5  -2.89178   GCTTAATTGAAAGTG     TATGTGAGTTAAAAG TTCG CTTTTGACTCACAAA      ATTTACTCCATTTAT  81 35
JCR18_RS10260 NONE
JCR18_RS10265 2147987 .. 2148003 +  -5.1  -5.28166   GAGGCATGGAAGCCT              CCTCTGT TCA ACAAAGG              TTTTTGTTACTTTTG  79 116
        pcaF 2149514 .. 2149525 +  -2.2  -3.53012   CTTTGATTATTGAAC                GTGT TGAA GCAC                 TTTAAGGAGAAACAA  46 9
        pcaD 2150357 .. 2150370 +  -5.2  -5.60689   TTCATTTCAAAAAAA               GGCC TATAAC GGCC                TTTTTTATTCTCTCA  87 62
JCR18_RS10280 2153075 .. 2153105 +   -15  -4.41302   TTATGTTAAAAGACT       GAGGTTTGTTATTT ATA AAATGACAAACCTC       TTTATTAGTTTAATA 100 57
JCR18_RS10350 NONE
JCR18_RS10355 2169854 .. 2169868 +  -3.5  -3.09749   TTTCACAATACGTAA               TGCCG AGGAC TGGCA               TATATCTTGGAAATG  46 108
JCR18_RS10360 2171152 .. 2171175 +   -14  -5.33785   AATTCTAAATAAAAA          TTACCCCCTA ATTT TAGGGGGTAA           TTTTTTATCCTAATT 100 33
JCR18_RS10385 NONE
        pcaU 2177136 .. 2177156 +  -9.9  -3.14881   TTGCTTTTGAGTTTT            TATATCTGT TTG ACAGATATA            TTCGTCACGGCCTTC  73 283
JCR18_RS10490 2196774 .. 2196802 + -16.3  -3.85859   AGGGTAAATAAAAAA        GTGCTATTTCTAA CAC TTAGAAATAGCAC        TTATATTTAGATATT 100 34
JCR18_RS10510 2201451 .. 2201478 + -11.5  -4.07124   GCTTCTGTTCAAGAA        TGCCCAAATTA TTTTTT TAATTTGGGCA         TTTATATAAATAGTC 100 41
JCR18_RS10515 2202528 .. 2202550 +  -8.5  -4.19177   TTAAAGTATAAAAAA           TAAAGCCCG AGATC TGGGCTTTA           TTTATATTCAAAGAT  87 37
JCR18_RS10540 NONE
JCR18_RS10545 2208568 .. 2208587 +  -7.9  -3.45707   CTTCTTAAAAAAAAA            GGATCTG CTAAAA CAGATCC             CTTTTTAAATGTTTA  71 33
JCR18_RS10580 2216950 .. 2216961 +    -3  -3.09635   CAGACCTGCATGCAG                CATA ATAT TATG                 TTGACTACTGCAACT  44 217
        ilvA 2219766 .. 2219803 + -19.5  -3.73725   AGTAACCTTTCATTT   TGATAAAAAAGCCGGCA AATA TGTCGGCTTTTTTATCA    TTTAAGCTTATTATT 100 36
JCR18_RS10600 NONE
JCR18_RS10605 2221914 .. 2221930 +  -9.4   -3.2511   TTGGTTAATAAAAAA              GCCGCT GTAAA AGCGGC              ATTTTATAGGTCAAA  78 33
JCR18_RS10625 NONE
JCR18_RS10630 NONE
JCR18_RS10635 2230641 .. 2230653 +  -3.5   -3.8253   GTCTTTAATTGCTTT                TTAAA AGG TTTAA                TTATTGCCTTTATTT  54 59
JCR18_RS10645 NONE
JCR18_RS10650 NONE
        cydB NONE
        cydX NONE
JCR18_RS10665 2235368 .. 2235385 + -11.3  -5.01042   TAACCTAAACAAAAA             GGACCTC ATTT GAGGTCC              TTTTTCATTTCGATT 100 33
JCR18_RS10700 2240108 .. 2240123 +  -6.8  -5.96219   GCAAGCATAAAGAAA              CGTCAC TTAG GTGGCG               TTTTTTTTATACCTA 100 31
JCR18_RS10705 2241081 .. 2241092 +  -4.4  -3.99805   AACTTATATTTGAAT                GACT AGCA AGTC                 TTTGCATTTTTCAAA  60 92
JCR18_RS10710 2241593 .. 2241627 + -13.1  -4.66833   TCAGGCTAAATACAA     AAATAAAAATGGGCG ATTAA CGCCCATTTTTATTG     TTTTTAAACTTAAAG 100 32
        grxD 2243416 .. 2243451 + -13.6  -2.68088   CTCCAGAAGCTTAAT    AATAAAAAAGCCAATC GAAA GATTGGCTTTTTTATA     CTTATAAATTTAACA 100 27
JCR18_RS10730 2244950 .. 2244968 + -10.4  -5.65177   AAGCCACATAAAAAA             GTTCGATA GAT TATCGAAC             TTTTTTTATGCATAT 100 45
        brnQ 2247485 .. 2247516 +  -6.1  -3.89346   ATTTTATATATCGAA      TAAAATGCTGCGTT TACCC AAC-CGGCATTTTA      TTTCTAACATCAGCA  66 79
JCR18_RS10745 2248176 .. 2248188 +  -4.9  -3.03903   TTTATAAACATAGAA                GTTTT TAT AAAAC                TGTTCAAAAAATTTT  52 159
JCR18_RS10750 2248554 .. 2248583 + -13.9  -3.90112   CAGAAATAAGAATTC       TAAAAATGGATGA GCGA TCATCCATTTTTA        TTTGCTTAAAAACAA 100 32
JCR18_RS10760 2250053 .. 2250080 + -10.6  -5.80817   CTGCTTTTATTTTCG        CCTCTAAGTCAG TAAT CCGGCTTAGAGG         TTTTTTTGTATTAAA 100 44
        ptsP NONE
        pfkB NONE
JCR18_RS10775 2255793 .. 2255812 + -10.8  -5.54885   CTCATAATTTAAAAA            GGGAGAAT ATAA ATTCTCCC             TTTTTTATTACTATT 100 34
JCR18_RS10785 2257469 .. 2257484 +    -9  -5.77677   ACGATTAATTCTCAA              GCTCTC TCAT GAGAGC               TTTTTTATTATTTTC 100 63
JCR18_RS10790 2257833 .. 2257859 +  -6.7  -4.15841   AAAAGCCGGAAACCG         TATAAAAAGCC TCCAT GGCTTTTTTTA         TTTATAATTTAATAA  74 21
JCR18_RS10795 2260513 .. 2260530 +  -2.1  -2.59482   AGGGTCAGGCTTATC             TAGAA-AG TCA CTATTCTA             TGAATTAGTCATTTA  39 0
JCR18_RS10800 2261130 .. 2261147 + -11.3  -5.05782   CCTTTATATAAAAAA             CCCAGCT ATAT AGCTGGG              TTTTTTGAAATAAGT 100 48
JCR18_RS10810 2263745 .. 2263762 +  -8.5  -2.67441   CCTTTGTAAATAACT             CATCACT GTCT AGTGATG              TGGTGTAGTCGCTTG  69 173
JCR18_RS10815 2265295 .. 2265308 +  -8.1  -4.21194   AAAAATTTAAAAAAA               GGTCC TTCG GGACC                TTTTCAATCATAGAG  83 31
JCR18_RS10840 NONE
JCR18_RS10845 2272625 .. 2272642 +  -2.1   -3.9534   ACAATGCTTCTCAGC             CTTGTAAT GCC ATT-CAAG             TTTATAAGTATCAAT  51 278
JCR18_RS10865 NONE
JCR18_RS10870 NONE
        recA 2276023 .. 2276036 +  -9.5  -5.00884   ACATGAGTCATAAAA               CGCCC TTCG GGGCG                TTTTTTACAAGGAAT 100 45
JCR18_RS10880 2276928 .. 2276938 +  -3.2  -4.55118   TTTTTATATTCCTGT                 GTCA AGG TGGC                 TTTTATATAAAATTA  62 414
JCR18_RS10890 2277856 .. 2277897 + -15.5  -3.81146   TTAACAAATAATTTA GTTATAAAAAAGACACTGT TAAA ACAGTGTCTTTTTTATGTC  TTCTTGATTAGCGCA 100 30
JCR18_RS10955 NONE
        glnG 2293217 .. 2293238 +  -4.4   -5.0065   AGCAAAAATCAAAAA           GCGGCTAA TTTAAT TTAGCCAC            TTTTCTTTATGACTA  73 47
JCR18_RS10970 2295164 .. 2295177 +  -5.3    -3.484   AAGTCTAATTCTTTT               GCATT TTGA AATGC                TTATAGTATAGTAGA  58 266
        argF 2296206 .. 2296224 +  -6.7  -6.23317   TTCTAATTCAAAAAA             CAGCATC GTTAA GGTGCTG             TTTTTTTATTTTTAT 100 42
JCR18_RS10985 2297043 .. 2297059 +  -3.7  -2.90813   ATGCTTTGACGCATT              TCCAAAT TGT ATTTGGC              TAATTTAGGACGCTC  46 161
JCR18_RS10995 2298148 .. 2298177 +  -9.4  -4.83615   AGTGAATATAAAATA       AAAAAGCCAGTG CATAGA CACTGGCTTTTC        TTTTTATGCGGGATA 100 39
JCR18_RS11010 2301118 .. 2301136 +  -8.2  -2.62425   TTATCTATATTGAAG             CCTTCTTT TAA AAAGGAGG             GTTCTACAGTTAATT  67 43
JCR18_RS11015 2301564 .. 2301581 +  -2.7  -3.99775   TGGGAATATATAGAA             GATCTAT TGGT ATAGCTC              TTATTATTAATAAAT  53 11
        tusD 2304658 .. 2304681 +  -3.3    -3.965   CTCGTCTTCTTCAAT          TTTAAGTTA CTTTGT TAACTTAGA           TTGTTGCTTTTAAAA  56 21
JCR18_RS11035 NONE
JCR18_RS11040 2305346 .. 2305356 +    -4  -2.70143   AATTTAATCGTTGCA                 TTTC TTT GAAA                 TAATATAGTTAGGCT  46 12
JCR18_RS11045 NONE
JCR18_RS11055 2308232 .. 2308245 +  -5.3  -3.19656   TGACGATATTCCAAA               GGTTT ACCT AAACC                TTGGTCCATCCATTT  53 173
JCR18_RS11120 NONE
JCR18_RS11125 2325406 .. 2325418 +  -7.7  -3.25088   GACCCATAAGACAAA                TGCGT TAT ACGCA                TTACTACATTTAAAA  69 99
JCR18_RS11135 2327176 .. 2327196 +  -6.2   -2.9632   GCCATAATAAGCAAA            CTTTGCAG ACATC TTGCAAAG            ATTATTTGCAACTTT  58 207
        aroQ NONE
        accB NONE
        accC 2329519 .. 2329554 +   -18  -3.08696   GCTTAATCTGCTTCA    TATAAAAAAGCCTCTT AAAT AAGAGGCTTTTTTATA     TCTACTTGTTTATGG 100 35
JCR18_RS11170 2333439 .. 2333497 +  -8.6   -3.6834   TTAATTTAATAATAT TGAAA-TACTAGACTAAAAAGCAAGTG AGTATA CTTTTGTTTTTTAGTCTAGAAGTTTCA TTTAAAAATTTTATT  77 37
JCR18_RS11175 2335370 .. 2335381 +  -4.4  -2.97021   CAGCTCCCTCTTAAA                GCTT AATA AAGC                 TCTGGTCTTTGCCAA  49 20
JCR18_RS11180 2337713 .. 2337729 +  -6.5  -3.68724   GTGAAAGCAATAAAA              CCCTATC GAC GATTGGG              TCTTGTCTTTTTTCT  64 525
JCR18_RS11210 NONE
JCR18_RS11215 2344753 .. 2344773 +  -3.2  -3.60151   TTTGGACCAAGTACC            CATAGGTC ATAAC GGCCTAAG            TTATCGTTTAAAGCA  50 441
JCR18_RS11235 2351833 .. 2351843 +  -5.4  -3.61654   GCATCGCATAAATTT                 TAGC AAG GCTA                 TTTGCAGTAAATGTC  58 438
JCR18_RS11255 2356946 .. 2356967 + -13.1  -4.09556   TTATCGACCAAAAAA           TAAGCACCC ATCT GGGTGCTTA            TTTCATTTCAATCTA 100 48
JCR18_RS11265 NONE
         tal 2359553 .. 2359581 + -14.1  -5.52096   TTTCATACAAAATTA        CCGATTTTTGTTA TCA TGACAAAAATCGG        TTTTTTATTGGGTTT 100 51
        leuE 2360340 .. 2360369 +  -3.7   -5.1287   GCACAAAAAATGTTC       TTACCTGTCTTACC CCA GGTAAGGCAA-TAA       TTTTTTCACTATGAA  74 115
JCR18_RS11285 2362133 .. 2362184 +    -9  -2.80398   AAGGCTTAAACGAAA GAGTTTGCGCTTCATCATTTA-GAG AAA TTCATAAAAAATTAAGCGCAAACTC TCGTTAAATTAATTA  73 39
JCR18_RS11320 2368294 .. 2368313 + -10.8  -4.91109   CTGAGTCGACTAAAA            GCCTAATC CATT GATTAGGC             TTTTTATCATAAAAA 100 44
JCR18_RS11325 2370138 .. 2370174 + -14.1  -2.90455   ACGCTATTTTTATGC    CTATATAAAAGCTCTAA CTA TTAGAGCTTTTATATAA    ATCTTTTAATTATCA 100 45
JCR18_RS11355 2377011 .. 2377024 +  -2.5  -4.16371   AAACACATGAATCGT               TATTT GAAC AAATA                TTTGATTCTTTAATA  57 225
JCR18_RS11385 2383289 .. 2383314 +   -12   -4.8048   TAGTAACTAACATTA         TAAAAGCCCC ATTATC GGGGCTTTTA          TTTTTAGTCTAGGAC 100 54
JCR18_RS11400 2386446 .. 2386461 +  -3.2  -2.79188   GCTCTGTGTTTAAAG              CGCTAA TTTT TAAGCG               TACTTCACTTAAGTC  44 221
JCR18_RS11430 2392461 .. 2392486 +  -7.7  -4.98672   AACCTCTTATAAAAA         CCTAAAGTC AAAACAAA GACTTTAGG          TTTTCTATTTTTGCA  89 52
JCR18_RS11435 NONE
        thiM 2394734 .. 2394753 +  -8.6  -3.88787   AATCCCCTGCTTCTT            CTGGTTGC TCAG GTAACCAG             TTTCTAAAGATGTAA  77 155
JCR18_RS11460 2399148 .. 2399175 +  -3.5  -5.41143   TTGACTTACTTTTTG        GGGAATACT TAGCTCCAGC GGTATTCCC         TTTTTTTAAAACCTA  76 89
JCR18_RS11465 2400627 .. 2400644 +  -4.9  -2.75963   GAGACATTTCAGCTT             TAAGCGT ACCC ATGCTTA              CTTTACGCTCACCAT  50 405
JCR18_RS11475 2403157 .. 2403178 +  -7.3  -5.68438   TTAATTATATAAGAA           GCCGGTAAT TTAA ATTGCTGGC            TTTTTTATTTAGTAC 100 93
         eat NONE
JCR18_RS11485 NONE
        eutC NONE
JCR18_RS11495 2408191 .. 2408226 +   -15  -4.82128   ATGAGAAGACACCTG    AATAAAAAGCCCAACT TTAC AGTTGGGCTTTTTATA     TTTTCTGTTTACTCA 100 355
JCR18_RS11505 2410679 .. 2410692 +  -2.5  -4.13945   TCGAATCTGCTAAAA               TTATT TCTG AATAA                TTTTAGGATAAAGCT  53 12
JCR18_RS11510 2411691 .. 2411703 +  -3.5  -4.56969   TTAGTAAAAAATTTA                TATAA GTA TTATA                TTTCTTTATCACATT  63 289
        nfsB 2412468 .. 2412497 + -16.7  -3.46647   TTATAAGAATTTAGT       GGAGTTCAAAAGA ACAG TCTTTTGAACTCC        TATTTCATAGCTAAG 100 35
JCR18_RS11550 2418586 .. 2418611 +  -4.1  -2.95192   TTAAAAATCATTTGG         TTTTGTTATTC ATGC GAAAAACAGAA          GTTTATCAGGTTCGA  47 126
JCR18_RS11555 NONE
JCR18_RS11560 2419602 .. 2419617 +    -4  -3.41982   TGATGATAAACACCT              TGATGA ATAG TCATCG               TTAATTGATGAGTTT  50 181
JCR18_RS11575 2421171 .. 2421186 +  -4.6  -4.29396   TATAGGTAAATAAAA              GGCACC CGAA GGTACC               TTTTAATAAATGCTT  62 28
JCR18_RS11595 2425279 .. 2425308 + -14.5  -4.24149   TTCTAATACTTTTTC       GCGCATAATTTGA ATAA TCAGATTATGCGC        TTGTTCTTTTGGTAG 100 132
JCR18_RS11630 NONE
        coq7 2439774 .. 2439798 + -11.6  -5.09173   CTTTAAAAAAACAAA          GGATTGATCT CAAAC AGATCAATCC          TTTTTTAAAATATTA 100 35
JCR18_RS11645 2442227 .. 2442251 + -11.5  -5.76633   AAACCACTTTGCAAA          CCCTTAGGG AGAAATA CCCTAAGGG          TTTTTTTATATCTCA 100 64
JCR18_RS11695 2454008 .. 2454028 +  -5.5  -4.20918   AATATAAAGAATAAA            GGGAAAT TCTAAAT ATTTCCC            TTTGTTCAAATTAGC  66 39
JCR18_RS11715 2459041 .. 2459063 +  -2.7  -3.59627   TATACATCGAATGAA           GTTTAAGGC ATTAG GGCTTAAGC           TTATGATATTTATGT  48 43
JCR18_RS11720 NONE
JCR18_RS11725 2461429 .. 2461448 +  -3.6  -4.08689   GCCACAAGCAAATTT            CACATG ATGCAAGC CATGTG             TTTGTGCATTTTCTT  56 370
JCR18_RS11745 2465059 .. 2465071 +  -3.5  -3.52117   TAAACTGAATATATA                TAAAT GGT ATTTA                ATTTTTCTAAGTGAA  50 42
JCR18_RS11750 2465689 .. 2465700 +  -5.8  -5.64274   AAATCAGCTTAAAAA                CACC TTCG GGTG                 TTTTTTTATAACTAA  90 52
JCR18_RS11755 2466415 .. 2466443 + -13.4  -4.07568   ATTTATATATCAATC        TAAAAAAGCACC CTAGT GGTGCTTTTTTA        TTTTAGGAAGAAAGC 100 40
JCR18_RS11760 NONE
JCR18_RS11765 2468311 .. 2468344 +  -6.7  -2.59891   TATCGAGTTAAATAC     CCCTGCTCATCAT AATGTAAG ATGATGCGCTGGG      ACTTTTGTAATTCTG  59 87
        ppsA 2478029 .. 2478044 +    -9  -5.32699   TTTGTTATAAAAAAA              GACCCA TCCG TGGGTC               TTTTTTCATCTTTAG 100 41
JCR18_RS11800 2478870 .. 2478886 +  -9.4  -5.47218   AATGTCTAAAAAAAA              GGAGGC ACCTC GCCTCC              TTTTTTTCCATAGAG 100 62
        cyoA NONE
        cyoB NONE
        cyoC NONE
JCR18_RS11820 NONE
        cyoE 2484028 .. 2484051 +  -7.5  -3.83409   CCCTGCTCCAAATCT          TCCTCTCTT TTAATT AAGGGAGGA           TTTCCTCCTCTCTCA  74 13
        rpsF NONE
        rpsR NONE
        rplI 2485319 .. 2485338 + -12.2  -5.80248   TTCTCATCAAAAAAA            GAGCATGC TTAC GCATGCTC             TTTTTTTATCTCTTA 100 42
        dnaB NONE
         alr 2488070 .. 2488086 + -10.9  -5.81412   TCACTAAATAAAAAA              TCCAAGC ACT GCTTGGA              TTTTTTTTGAATAAA 100 44
JCR18_RS11875 2493057 .. 2493074 +  -9.9  -3.94333   AGTAGATATAAAAAA             GAGAACC ATAT GGTTCTC              TTTAGATTTTGAATT  87 43
JCR18_RS11885 2495840 .. 2495860 +  -9.7  -5.42198   ATCATTTTCAAAAAG            CGGTCCATT AAA GATGGGCCG            TTTTCTTTTTTAAAC 100 96
        prmA NONE
JCR18_RS11895 2497963 .. 2497998 +  -9.2  -3.90048   ATTGTTCTTATGTTT    TAGAGTCACTGTTTTAG GAT CTAAAACAG-GACTCCG    TATTTTTAGACCACA  81 301
         fis 2498343 .. 2498362 +   -10  -6.02345   GAATAAATGATAAAA            TGCTCACG GCTT CGTGGGCA             TTTTTTTTGTGCTTC 100 35
        purH 2500019 .. 2500039 +  -8.3  -4.10161   TCTAGTCCTCCCTAA            CCCTCCT TTTATTC AGGAGGG            TTTTCCACAATAATG  79 47
        purD 2501422 .. 2501451 + -13.1  -4.56736   TAAAAATTTAAATAG       TAAAAAAGCTCTC TTAT GAGGGCTTTTTTA        TTTTGCTTATTCACT 100 38
JCR18_RS11915 2502549 .. 2502569 + -14.1  -5.93252   AGCTGCAACGCGAAA            CAGGCAAAG ACT CTTTGCCTG            TTTTTTCTTTTTAGC 100 50
JCR18_RS11920 NONE
JCR18_RS11925 2504334 .. 2504351 +  -8.4  -5.79595   TGAACTCCTACAAAA             GCCCTC TTCCAT GAGGGC              TTTTTTATTTTAGAG 100 42
        gloB 2505227 .. 2505254 +    -5  -4.65895   TAAGCTTTCAACCAA        GATACAGTTT AATTTTAA GAACTGTATC         TTTTTGAATAAAGCA  69 46
JCR18_RS11935 2505990 .. 2506009 +    -8  -4.36595   ACAGGTTTTTTATTT            CGAATTAA AAAA TTAATTCG             TTTTCGATTTGCGTA  85 249
JCR18_RS11945 2508070 .. 2508096 +   -11  -3.92276   TATACATTATTTTTC         CACTAAAGCAAA TCC TTAGCTTTAGTG         TATTTTGTATATAGT  90 435
JCR18_RS11955 2508697 .. 2508720 +    -6  -4.30576   CTGTTGCAAATAGTC          GGTGGTGATA AACT TATCATCCCC           TTTTGCTGATGGAGC  69 18
JCR18_RS11960 2509518 .. 2509529 +    -3  -4.06904   ATGAGCCTTTTCAAC                GTAA CTAT TTAC                 TTTATCGTTGACTAA  55 98
JCR18_RS11985 NONE
        tnpB NONE
JCR18_RS11995 2514730 .. 2514747 + -11.3  -3.37959   CTTACTGATCAACAG             CCACACC GCAA GGTGTGG              TTGGTGTTACGCTTA  90 33
JCR18_RS12020 2519599 .. 2519609 +    -4  -3.60419   CAAGACAATAGCTAA                 CAAT AAG ATTG                 TTGTACTTTAGCGCT  53 26
JCR18_RS12025 2520590 .. 2520609 +  -5.1  -3.47762   TAATGTTGCGACTCT            TTCATTC GTCGAA GAATGAA             TCTTTAGTAAATCTT  56 516
        aspT 2539502 .. 2539514 +  -5.5  -3.27808   TCGGACCACTGATTG                TAGGC TTG GCCTG                ATTTTCTACATTGAA  56 12
JCR18_RS12125 2541183 .. 2541205 +  -7.7  -5.38839   TAAAATTATAACTAA           GGTGAGGCT TTAAC AACCTCACC           TTTTATTTTTATATC 100 38
        proP 2545580 .. 2545605 +  -9.8  -4.50259   CAACGTTTTTTATAA         GAGTAGCGAC TTAAAT GTCGCTATTC          TTTTAATATATTTTT  91 47
JCR18_RS12150 2546228 .. 2546256 +    -9  -2.69151   AATAGTTTGGTTAAA        GATAAAAGCCCA TGAAC TGAGCTTTTATC        TCCTCTATAAAACAG  72 36
JCR18_RS12185 2553527 .. 2553548 +  -8.8  -4.85129   CCATAAATTTTAAAA           CATAGGAG CCAGTT CTCCTATG            TTTTTAATATATGGT  93 35
JCR18_RS12200 2555526 .. 2555537 +  -7.2  -5.63103   ATGCCCCATAAAAAA                GCCC TTAC GGGC                 TTTTTTTAATTAAGC 100 56
JCR18_RS12210 2558315 .. 2558338 +    -6   -4.2558   AACGTTAATGAAAAA          CCAGCCTG TTAAACCT TAGGCTGG           TTTTAATACACACTA  69 49
JCR18_RS12215 2559276 .. 2559294 +  -3.2  -4.10459   AATCTGCACAAATCT             TCAAGATT AAA AATCTTAA             TTATTTCATCTTGTC  55 16
JCR18_RS12220 2560380 .. 2560393 +  -3.9   -3.2614   ATCTGGAGAAAATGA               TAAAG TCAT CTTTA                TTAATATAAAAAGTC  49 464
JCR18_RS12225 2561325 .. 2561341 +  -4.5  -4.19506   CCGTGAAATATAAAA              TTTCATT ATT AATGGAA              TTTTCAACTTAACAT  62 515
JCR18_RS12260 2565705 .. 2565736 + -13.3   -4.1347   TTAGAATTAAAAAAG      TAAAAAGCTCCTT TTTATT AAGGAGCTTTTTA       TTTATATCATTAAAA 100 112
JCR18_RS12280 2571371 .. 2571386 +  -6.1  -5.09173   TATTGAAATAAAAAA              GCTCC ACAAAA GGAGC               TTTTTTAGAATCTTG  82 54
JCR18_RS12315 2575313 .. 2575323 +    -4  -3.07443   AACGCCTTAAAAGAT                 TTGT CTA ACAA                 TTAAATAAAATGTCC  48 11
JCR18_RS12320 2576786 .. 2576802 +  -2.3  -3.90707   CTTAAGCCCAGTCTG              CTTTAAA GCT TTTACAG              ATTTTTTTACTAAGG  51 277
        rpsU NONE
JCR18_RS12335 2578367 .. 2578377 +  -5.4  -3.18507   TCAGCAAAAATTAAA                 GCTA AAT TAGC                 TTAATCCCCTCTCTT  56 11
JCR18_RS12400 2591428 .. 2591447 + -10.8   -5.7946   ATTAATCAAAAAAAA            TCCCAATC ATTT GATTGGGA             TTTTTTTATTAGCAA 100 36
JCR18_RS12415 2593527 .. 2593543 +  -2.3  -4.00756   GAGAATTTCACTATT              TAATTGA AAC TCAATAA              TTCTTTGCTAAACTA  52 9
        rpoH 2594559 .. 2594581 +  -8.5  -4.56358   AGAAAATCAAAAAAA           TAAAAGGGC GATAA GCCCTTTTG           TTTTATCTGGCTATG  89 41
JCR18_RS12425 NONE
        thiS NONE
JCR18_RS12435 2596042 .. 2596070 +  -6.8  -3.39286   ATAATTTATTTCTAA        GGAATCACTG TTTTTTTTT CAGTGGTTCC        TCTTTCCCCTCATGT  65 37
JCR18_RS12450 2598354 .. 2598384 + -12.1  -4.09243   GAAATAAAGTGTATT      TGATGGGCATAACT TGAG AGT-ATGCCCATCA       TTTTCAAGCCATGTC 100 34
JCR18_RS12455 2599532 .. 2599557 + -13.5   -3.0782   TTCCATATAAAAGTT         TAAGAAGCTCA TAAT TGAGCTTCTTA          TCTCTTAAAAAATTA 100 59
JCR18_RS12480 2606315 .. 2606332 +  -7.7  -5.42862   TAAATAATAAAAAAA             GCCTACT CAAA GGTAGGC              TTTTTTTGAAACTAT 100 34
JCR18_RS12495 2610565 .. 2610612 +  -9.3  -4.12841   AGGTCGACATGGATG TCGACCGTATCACTG-CGATAC AGGAA GTATCGTCAGTGATACAGAGGA TTTCTGGTTACTTTT  85 60
        mrcB NONE
JCR18_RS12515 2615046 .. 2615073 + -12.2  -4.78597   CAAGAAGCACAACAA        GCATTGAAAGCT TTCT AGCTTTTAATGC         TTTATTTCTTATTAA 100 8
JCR18_RS12525 2616340 .. 2616359 + -10.8  -5.19879   AAAACAAAAAATGGA            TAGCATGG GTAA CCATGCTA             TTTTTGTATTTCACG 100 74
JCR18_RS12550 2622342 .. 2622356 +  -3.5  -3.71848   AAATTTCATTTTATA               GACTC GTTCA GGGTC               TTCTTGATAGGCAGG  52 131
JCR18_RS12560 2623879 .. 2623896 +  -8.4  -5.17353   TTTCTAATTAAAAAA             CCGAGG CTAAGT CCTCGG              TTTTTTAATACCTCT  93 46
JCR18_RS12570 2626460 .. 2626476 +    -3  -3.05935   GCTATAGATCAAATC              CTTACT AATTC AGTAGG              TTGAATCGAAAATAT  45 5
        yegQ NONE
JCR18_RS12580 2628298 .. 2628314 +  -2.2  -4.36914   CAATTTATCAGTTTA              GTTCCA TTTAC TGGTAC              TTTTGTACCAAAAAA  57 150
        abeS 2628876 .. 2628888 +  -4.8  -3.27786   TATTGAGTACTTCAT                CAGG ATGGC CCTG                TTCCTCAATTTTCCC  54 162
        adeF NONE
        adeG NONE
        adeH 2639153 .. 2639166 +  -9.5  -5.71712   TAGTTAATAAAAAAA               GCGCC TTAC GGCGC                TTTTTTTATATACAC 100 34
JCR18_RS12635 2641684 .. 2641694 +    -4  -3.30124   ATAATGATTGGTGTC                 GTAA CTT TTAC                 TTGTAACGGCTGCGA  50 284
JCR18_RS12645 2643738 .. 2643771 +  -5.5  -2.94588   ATATTTTATTAAGAA     CAGTACTGTTTGAT AGAAAAA ATCAAACAG-GCTG     CTTCATTTTTATATT  53 113
JCR18_RS12650 2644473 .. 2644487 +  -3.5  -3.65529   CATTAAATTCACTTG               GTACG TATTT CGTGC               TTTACCTGCAAGTGT  52 68
JCR18_RS12655 2644582 .. 2644605 +  -2.3  -3.37067   AAGCCTGGGGTCGTG          GGTTCGATC CCCGCC GAGCGCACC           ATTTTATATATAATA  44 1
JCR18_RS12660 NONE
JCR18_RS12665 NONE
        queF NONE
JCR18_RS12675 2647934 .. 2647949 +  -6.8   -5.7946   ATAGTCTATCGGAAA              CCTGGT GAGA GCCAGG               TTTTTTTATTGCAAA 100 47
        rodA NONE
        mltB 2650193 .. 2650210 + -11.3  -4.78764   TTAGGTACAGAAGTA             GCTAGCC GATA GGCTAGC              TTTTTGATGAGTTTA 100 14
JCR18_RS12690 2651410 .. 2651425 +    -4  -5.43866   TATTATTTTCCCATT              CTTCAT GAAA ATGAGG               TTTTTTTGAGGATTC  77 323
JCR18_RS12695 2652133 .. 2652155 +  -9.2  -3.79445   ATAAATTTTGAAGAA           GCTGAATCCT AAA AAGATTCAGC           TTTAACTTAATGATT  81 37
         map 2657583 .. 2657609 +  -8.1  -5.86976   TTTAATCAAAATTAA         TAAAAGGCTAC TTTAT GTAGCCTTTTC         TTTTTTATTTTGTAC 100 41
JCR18_RS12735 2658860 .. 2658890 + -14.3  -5.40464   CTCAAAAGCACACAA       GCTATAAAAGCTT TACTT AAGCTTTTATAGC       TTTTTATTTATCCTG 100 43
JCR18_RS12740 2660614 .. 2660637 +    -9  -3.67558   TAATTCTGATAAGAA          GCAGAAATCA AAAA TGATTTTTGC           TTCTTCCCCTCTCTC  80 38
JCR18_RS12745 2662191 .. 2662208 +  -9.1  -4.72272   AATAAAAATAAAAAA             GCCCGCA AGTT TGTGGGC              TTTTTCATGAAAAAC  90 226
        lipA 2664878 .. 2664896 +  -6.7  -5.72622   ATAAGTATTAAAAAG             GCCTTCA GATTA TGAGGGC             TTTTTTATTTATACA 100 47
JCR18_RS12760 2667669 .. 2667692 + -12.6  -4.57341   ATTAATAAACAGCCA          TAAAAGCGTC ACTC GACGCTTTTA           TTTTTAGGAGAAATT 100 89
JCR18_RS12765 2668101 .. 2668123 + -10.6  -3.89336   ACAATAACTTCAGTA           TGAGCCAGCA CTT TACTGGCTCA           TTTAAGTTTAATTCA  89 34
JCR18_RS12775 2670280 .. 2670303 + -13.8    -5.252   ATACTAAGAACTTAA          GGGCAGACGG TGAA CCGACTGCCC           TTTTTTCTAAAAATG 100 34
        metF NONE
JCR18_RS12785 2672000 .. 2672011 +  -4.4  -3.10481   TTAAATTTTTTTCCA                CTGA TAAA TCAG                 ATTCTTTCTGTATAA  50 105
JCR18_RS12790 2674933 .. 2674956 +  -4.6  -4.70659   AGTCTATTTTACATG          CGCTGGTTTT TCCA AAAATGAGCG           TTTTTGACTGTGAGA  68 54
JCR18_RS12795 2677459 .. 2677495 +  -8.2  -5.14965   AATGACTTGAGAAAA   CCTCTATTCTGT-AGCA TGAT TGCTTGAAGAATAGAGG    TTTTTTCATGCAAGT  93 73
JCR18_RS12800 2678746 .. 2678788 + -10.8   -4.1964   GTCACTCCTAATGAA CAACAATAAAAAAAGCCTCA AAA TGAGGCTTTTTTTATTTAGG TTTTAACGTCTTGGA 100 30
JCR18_RS12810 NONE
JCR18_RS12815 2681711 .. 2681728 +  -8.4  -6.20267   TTTCTTTATAAAAAA             CCACCC TGTTTT GGGTGG              TTTTTTTATTTTTAG 100 46
JCR18_RS12820 NONE
JCR18_RS12825 2682008 .. 2682026 + -10.3  -5.56263   GCCAAGATTCTAAAA             GCCCACA TTCAT TGTGGGC             TTTTTCTTTTCTAAT 100 37
JCR18_RS12830 2682261 .. 2682291 + -15.7  -4.13077   GAGAGCCAAGATTCT       TAAAAACCCACTC CTTAT GAGTGGGTTTTTA       TTTGTATGATGTCTT 100 33
JCR18_RS12835 2683020 .. 2683039 +  -6.4  -5.03715   ACAATATAACAAAAA            GAGCCTCT ATAA AGAGACTC             TTTTTTAAAACTAAT  82 292
JCR18_RS12865 NONE
JCR18_RS12870 2691649 .. 2691690 +  -4.7  -3.51091   TTCTTGTATGACCAA GGCAGAATAGTTTTTTTATT TAC AATAGAAGC-TTATTCTGCC TTAATTGTAGTTATC  56 43
JCR18_RS12875 2693306 .. 2693320 + -11.4  -3.58208   TATTGTGGATAGCTG               GGCGGT TTA ACCGCC               TTGCTTCTTCTGAAA  93 16
JCR18_RS13135 NONE
JCR18_RS13140 2730451 .. 2730467 +  -3.7  -3.71913   CCAAAGATTAATAAA              CTGTG AACCCGA CACAG              TCTTTTAAATGTGGG  52 30
JCR18_RS13145 2732860 .. 2732874 +  -7.1  -5.24647   AATCCCCCCTTCGAA               CCCAC CCCGT GTGGG               TTTTCTTTTGTCTAT  91 39
JCR18_RS13150 NONE
JCR18_RS13155 NONE
JCR18_RS13160 NONE
JCR18_RS13165 NONE
JCR18_RS13170 NONE
JCR18_RS13175 NONE
JCR18_RS13180 NONE
JCR18_RS13185 NONE
JCR18_RS13190 2737430 .. 2737444 + -11.4  -4.88786   CTTGCAACAGTTTAA               GGCGGT TAA ACCGCC               TTTATTTCTTTTAAT 100 26
JCR18_RS13275 2754093 .. 2754106 +  -8.1  -5.47431   AACCGCCTTAAAAAA               GCACC CTAG GGTGC                TTTTTTCTATCTTAA 100 17
JCR18_RS13295 2757106 .. 2757117 +  -7.2  -4.55287   TCTTCTAACAAAAAA                GCCC TTCG GGGC                 TTTTCTCTACATAAA  80 41
JCR18_RS13540 NONE
JCR18_RS13545 2786567 .. 2786583 +  -3.7  -3.34715   CAAAAGATTAATAAA              CTGTG AACCCGA CACAG              TCTTTACAACAGATC  48 30
JCR18_RS13550 NONE
JCR18_RS13555 2788192 .. 2788222 + -13.6  -3.22409   TTAAAGCACAAAAAT       TAGGTATTTCTAAT TTT ATTAGGAATACCTA       TTGACTTAATAATTA 100 97
JCR18_RS13560 NONE
JCR18_RS13565 NONE
JCR18_RS13570 NONE
JCR18_RS13575 NONE
JCR18_RS13580 NONE
JCR18_RS13585 NONE
JCR18_RS13590 NONE
JCR18_RS13595 NONE
JCR18_RS13600 NONE
JCR18_RS13605 2793205 .. 2793222 + -11.3  -4.77775   GAATCTGGTAAAGTA             GCCACCT ATTG AGGTGGC              TTTATTTTATACAAT 100 14
JCR18_RS13610 2793972 .. 2793991 +  -7.9  -5.28176   ACCCTTAATAAAAAA            GCCAACT ACGATC AGTTGGC             TTTTTTATGGCTGAA  91 82
        trpD NONE
        trpC NONE
JCR18_RS13635 2802446 .. 2802461 +  -7.6  -5.47218   TTCGAACAAAAAAAA              TGATCC TTTG GGATCA               TTTTTTTACATCAAA 100 23
        folE 2808162 .. 2808178 + -10.1  -5.64274   ACTGCCTAAATAAAA              GCCCGAC AAT GTTGGGC              TTTTTTTATAGCTGA 100 51
JCR18_RS13665 2810658 .. 2810686 +  -4.7  -5.29782   TCCCTAAAATAAAAA        AAGAGAAATAG TCATCAT CTATTTCTCTA        TTTTTTATAGGTATA  79 45
JCR18_RS13690 2816708 .. 2816738 + -13.5  -3.52177   AATAATCCTCTTAAT       TAAAAGAGCCTGC TTTAT GCAGGCTTTTTTA       TTAAATTTTTTAGCA 100 36
JCR18_RS13710 2820446 .. 2820462 +  -5.1  -3.54051   TTTAAGAAGGCAGAA              CCCTGAT AGG ATAAGGG              TTCTGTGAAATTTGT  56 1
        basD NONE
        basC 2832581 .. 2832610 + -16.7  -3.18199   AAAATATGAATATCA       TAAAAAAACCCGC GATT GCGGGTTTTTTTA        TTCGGTTGAAGATTA 100 39
        basB 2841312 .. 2841352 +   -10  -4.03989   CCCTAAAACCAACCA  TGTGCTTAAAAGCAAA CATCTCGAC TCTGCTTTTAAGCACA  TTTCAATTTTTCTAT  90 44
        bauF 2844776 .. 2844790 +  -3.5  -2.57822   ATTCATACATAAAGC               GGCTA CGTAC TGGCC               CTCTTCATCTTTAAT  43 337
JCR18_RS13810 2847248 .. 2847267 +  -8.6  -4.75372   TTAAACTGCTTAAAA            GCCCTTTT ATAT GAAAGGGC             TTTTTAGTCACTGCT  93 37
JCR18_RS13830 NONE
JCR18_RS13835 NONE
JCR18_RS13840 2852800 .. 2852827 +  -8.6  -4.15664   GAAACTATACATTTA        TGACTGTTTTTA AAAA TTAAAACAGTCA         TTTCTATATACGTTT  87 73
JCR18_RS13845 2854436 .. 2854471 + -11.4  -3.85835   CTTTCTGAATAAAAA    GCAAAATACTTTCTCT TAAA AAAGAGAGTATTTTGC     TTTGAGTCTTTATTT  95 47
JCR18_RS13850 NONE
JCR18_RS13855 2855806 .. 2855816 +  -2.6   -4.9251   TATTTTATAAAAATT                 TATT TTA AATA                 TTTTCATTTTTTATT  63 51
        yddG 2856855 .. 2856881 + -15.3  -2.81291   CTTCCTAATTTCTTA         GTCACAGCCAT CGTAT ATGGCTGTGAC         GTTTACGCTTATCAA 100 33
JCR18_RS13900 2866676 .. 2866692 +  -5.2  -5.80364   AAGGTAATAAAAAAA              GAGATT TTAGT AATCTC              TTTTTTTATTAAAGT  91 39
JCR18_RS13905 2868618 .. 2868666 + -12.1  -4.82901   GCTACTTGAATATTC TATTTAATAGAAAGAGAGTAATT AAA AATTACTCTCTTTCTATTATTAA TTTTTCTAAGAAAGA 100 50
JCR18_RS13915 2871870 .. 2871891 + -11.7  -4.62475   ACTTAATTTAATAAA           TCTCGGTAT AACA ATACCGAGA            TTTTAATTTGTAAAT 100 58
JCR18_RS13935 2877662 .. 2877687 +  -6.2  -3.62597   GATTCTTTTTTATAA         GATTACTCTC TCCCCC GAGCGTAATC          TTATTAACCAGTAAA  64 59
        epmB NONE
JCR18_RS13985 NONE
JCR18_RS13990 2890157 .. 2890184 + -17.2  -4.20806   CTTGTATATTAAAAA        CAAAAAACGGGC ATAA GCCCGTTTTTTG         TTTCGTTTTGAAGTA 100 45
JCR18_RS14015 2897117 .. 2897136 + -12.2  -4.55287   CACTGACATAAAAAA            GGGCTTGT TTTT ACAAGCCC             TTTTCTATGAATGAG 100 41
JCR18_RS14035 NONE
JCR18_RS14040 2900987 .. 2901011 + -11.5  -4.16182   ATACTGTTTGAAAAA          GCCGACTTC CCCCATA GAAGTCGGC          TTTGCTTTATCCTAA 100 66
        dacC 2902252 .. 2902276 + -15.1  -5.86976   GAATAGTTGAATTAA          GCACTCATGCT ATT AGCGTGAGTGC          TTTTTTATTTTATAC 100 56
JCR18_RS14050 2902887 .. 2902913 +  -5.3  -3.89346   ATCGAGTTTTTCAAA        CGATAGAGTTAT TCGC ATG-CTCTATCG         TTTGTAAGATGACCG  61 46
JCR18_RS14055 NONE
        mnmA NONE
        hflD 2905411 .. 2905421 +  -5.4  -2.72263   CCAGCATTAAGGAAT                 CGTT ATG AACG                 CTTTAACCGCACTAT  52 76
        purB 2906822 .. 2906839 + -11.3  -5.46657   AAAAAGTTATAAAAA             GCGAAGC TTAG GCTTCGC              TTTTTTATTACACTC 100 44
JCR18_RS14075 2907538 .. 2907552 + -11.4  -4.76312   ATTAAAATTAAAAAA               GCGCTC ATT GAGCGC               TTTTTACATGTTGTC 100 36
JCR18_RS14120 2920753 .. 2920767 +  -8.6  -2.52896   GTCCAGAGAGTGCTT               TTGCAC CTT GTGCAA               TCGCTTCAGCAATAA  64 492
JCR18_RS14140 2926162 .. 2926178 +    -8  -5.84381   TTTTTCAATCTAAAA              CCGCAT TCTTC ATGCGG              TTTTTTTATTGCTCG 100 45
JCR18_RS14150 2927420 .. 2927437 + -11.3  -4.01819   AAAGAAATAAAAAAA             GCCCTGA ATTC TCAGGGC              TCTTTTATCTTATTT 100 31
        fabR 2930474 .. 2930495 +  -5.9    -5.252   AGATTCCACATAAAA           TGGTTTGTG ATTT TACAAGCCA            TTTTTTATACACCTG  83 39
JCR18_RS14170 2931666 .. 2931680 +  -8.5  -5.84381   TTACTCAATAAAAAA               GCGCC TGTGT GGCGC               TTTTTTTATTACTCA 100 48
JCR18_RS14205 2940311 .. 2940332 + -15.9   -5.1104   GGTAAGAATCTTGAA           GTCGCGGCA AATA TGCCGCGAC            TTTTTATCTATATTT 100 36
JCR18_RS14215 2941474 .. 2941500 + -12.5   -3.6512   ATTTTACCACTCAAA         TAAAAAGCCAC ATGAA GTGGCTTTTTA         TTTGGCAATTATTTA  95 44
JCR18_RS14240 NONE
JCR18_RS14245 2949238 .. 2949256 +  -6.7  -4.28774   TATGCAATAAAAAAT            GCCCC-GA TATA TCAGGGGC             TTTTCCATTGAGTAG  74 31
JCR18_RS14250 NONE
JCR18_RS14255 2950431 .. 2950446 + -10.4  -4.53705   CTAAAGACTTTAAAA              GCCCTC AATT GAGGGC               TTTTCTATGAAAGTT  95 96
JCR18_RS14265 2952725 .. 2952740 +  -6.8  -5.54894   TATTTAAGTTTTAAA              GCTCAC GTTA GTGGGC               TTTTTTTAATGACTT 100 44
JCR18_RS14280 2958704 .. 2958723 +    -5  -5.93809   ATTTTATAAAGAAAA            GATGGC ATAATTCA GCCATC             TTTTTTTTATAGAAA  93 72
JCR18_RS14285 2960110 .. 2960126 +  -6.7  -4.92828   TGTTAAAGATTGAGA              TTTTGTA GTC TACAAAA              TTTATTTTTCACTTT  83 92
JCR18_RS14290 2960687 .. 2960704 +  -9.9  -5.82281   AGAAGATAATAAAAG             GCAAAGC TTCG GCTTTGC              TTTTTTTATGTCTTT 100 51
JCR18_RS14295 2962233 .. 2962246 +  -2.5   -3.1506   AGTCTGCTCTGTTTA               TTTTT GATG AAAAA                TTAATAACAAGGTTT  43 51
JCR18_RS14300 NONE
JCR18_RS14305 NONE
JCR18_RS14310 NONE
JCR18_RS14315 NONE
JCR18_RS14320 2968366 .. 2968392 +  -2.2  -3.70902   TGATTTTTAAACTTA         TCGTGCACTACA TTA TGTACAGCAGGA         TTTAAATGTACAGGC  49 388
JCR18_RS14335 2971314 .. 2971329 +  -2.6  -5.08824   CCTTATTTAATGTCA              CTC-CTT TAT AAGAGAG              TTTTTTAAATAAGAC  66 15
JCR18_RS14340 2972495 .. 2972518 + -11.1   -4.7261   AGATAAAAATTCCAA          GCAACCAGT CTCTGT ACTGGTTGC           TTTATTTTAGTGAGT 100 39
JCR18_RS14350 NONE
JCR18_RS14355 2975456 .. 2975472 + -12.3  -5.37593   AACCCCACAAAAAAA              GCTCGCA TGA TGCGAGC              TTTTTTAATTTAGAA 100 16
JCR18_RS14400 2986017 .. 2986046 +  -6.6  -4.36586   TACTTTGATATTTTA       TGAGTGAAGCAGA TAAAT TCTGCTTT-CTCA       TTATTTTACTTATAT  78 43
JCR18_RS14405 2987610 .. 2987624 +   -10  -5.96894   TCTACCATAAAAAAA               CAGGCA TAT TGCCTG               TTTTTTTATTTAAAT 100 31
JCR18_RS14415 2989280 .. 2989297 + -11.3  -5.37345   GAAAATATAAAAAAA             GGCCTCA AAAT TGAGGCC              TTTTTTATAATTAAA 100 44
JCR18_RS14430 2991544 .. 2991563 +  -7.1  -4.88407   GACCATAAAAACCAA            GGCAGCT TTAAAC GGCTGCC             TTTTTCATTAAGTAA  86 33
JCR18_RS14445 2992301 .. 2992321 +  -6.8   -5.5353   GCCAAATACTAAAAA            GCCCGC AGCATTAAA GCGGGC            TTTTTTATTGCTCTC 100 37
        nadB 3004685 .. 3004702 +  -9.1   -5.5604   GTTTTTTATAAAAAA             GCACGGT TCAT GCCGTGC              TTTTTTATTACTTAA 100 44
JCR18_RS14535 3009029 .. 3009046 +  -4.9  -3.31144   TGAAAATCAATAGTG             CAGAGAA GTAA TTCTTTG              TTCTAACGATAAGGA  54 15
JCR18_RS14540 3009718 .. 3009737 +  -4.2  -4.78848   TATCTTTATTTATTC            GCTTACTG GTTT CAGCAGGC             TTTTCTCTTTGAGGA  68 65
        cysT NONE
        cysW NONE
JCR18_RS14555 NONE
JCR18_RS14560 3013557 .. 3013584 + -14.4  -4.70659   AATTTAAGGGAAAAA        TAAAAGAGCTAC ATAA GTAGCTCTTTTA         TTTTTAGATATAAAA 100 41
        dapD 3015505 .. 3015532 + -15.8  -5.51612   CAGTTTGATCAAACA        TCTCTACGATCA ACAC TGATCGTAGAGA         TTTTATTTTTTATAT 100 44
        queE NONE
        queC NONE
JCR18_RS14585 3017439 .. 3017456 + -11.3  -5.65177   GTTGCTCCAAATTAA             GCCTGCA TTTA TGCAGGC              TTTTTTTATAGCTCT 100 47
JCR18_RS14590 3018181 .. 3018195 +  -2.2  -3.05597   TTTTTACCACTTGAA               TTAGAT CAA ATTTAA               CTTTTAAAGGATAAG  42 11
JCR18_RS14595 3018695 .. 3018711 +    -8  -5.00616   TTGAGTAACAAAAAA              GCGAGT TGAAT ACTCGC              TTTTTTACACGCACA  91 46
JCR18_RS14600 3019683 .. 3019693 +  -5.4  -3.60098   AGTCGTAAATAATAA                 GATG ACT CATC                 TTTGAAGTGGCCAAT  58 343
JCR18_RS14610 3020969 .. 3020996 +  -6.2  -3.93057   TTGAATAAACTCAAA        GGCAGGCTCTTC GTAA GGATGGCTTGCC         TTTAATGCTTTTGCC  66 58
JCR18_RS14630 3028406 .. 3028418 +  -4.1  -2.58714   AAGGTAATAAAATCG                GCTTG TTT TAAGC                TGCCTTAATATAGAA  45 15
        ruvA NONE
        ruvB 3030126 .. 3030145 + -10.8  -5.96894   TAAAAACTAATCAAA            GGAAGAGA ATTT TCTCTTCC             TTTTTTTATTTAACT 100 31
JCR18_RS14645 3031785 .. 3031825 +  -2.9   -4.2349   ATTTAAAAGCAGATG TATGGCT-TTGGATAGAA CTGATA TTTTATTCAACAGTCATA  TTTTAAATATAAAGC  57 151
        ybgC NONE
        tolQ NONE
        tolR NONE
        tolA 3034812 .. 3034844 + -15.9  -2.78816   AATAATTTTGTAAGA      GTTACATGCTTTAAA TAG TTTGAAGCATGTAAC      TATGCTACAAAATCA 100 36
        tolB NONE
         pal 3036781 .. 3036804 +   -14   -4.8143   AAACATCCCAAAAAA          TAAACGCCCA CATA TGGGCGTTTA           TTTTTACATTCTTAC 100 40
JCR18_RS14685 3038180 .. 3038203 + -12.5  -4.28656   AATTTAAATTACACA          GGGCGTCAT AGTATG ATGACGCCC           TTTTGGATATTCCCT 100 42
JCR18_RS14690 3039147 .. 3039160 +  -5.3  -3.53012   CCAATGACAGGATTT               TCCAT CTCC ATGGA                TTTAGCACCGAAAAA  58 176
JCR18_RS14695 NONE
JCR18_RS14700 NONE
JCR18_RS14705 3040511 .. 3040540 + -16.7  -4.92783   AAAGTTACTAACAAA       TAAAAAAGCCTCC TAGT GGAGGCTTTTTTA        TTTTTATCATCACTT 100 77
JCR18_RS14715 3044144 .. 3044156 +  -6.3  -4.88129   CTGCGATAACAGTAA                GTACT CCT AGTAC                TTTTTGATAGTTTTT  80 94
        purM NONE
JCR18_RS14740 3050128 .. 3050145 +  -9.9  -5.40072   ACGTCAATTAAAAAA             GGACATG CATG CATGTCC              TTTTTTTGCGAAAGC 100 52
JCR18_RS14755 3053427 .. 3053440 +  -5.3  -3.68859   CATAATAAGAAAATT               TTGGT AACC ACCAA                CTTTTTTAAATTGAA  58 323
JCR18_RS14785 3060349 .. 3060373 +  -4.4  -2.79718   TATTTATGCTAAAAA          TAGTGAAACT AATTG AATTTCACTA          ATATTTTAAAAATTA  49 10
JCR18_RS14790 3060564 .. 3060588 +   -13  -3.76789   TCATTTATATAAAAA          TAAAGCCCTC TTTTT GAGGGCTTTA          TTCATTTTATGACTT 100 45
JCR18_RS14800 NONE
JCR18_RS14805 3064735 .. 3064762 +  -4.1  -3.24725   TAAGAAGCAATAAAT        GGGATTTGTGT ATGGTG ACACTCATCCC         TGCTTTTATCATTTT  49 78
JCR18_RS14810 NONE
JCR18_RS14815 3066942 .. 3066958 +  -2.4  -3.32946   GTGTACAGATTATAT              TTTTAT TTACT ATAAAA              TCTTATAGTTAAAGC  44 63
JCR18_RS14820 NONE
JCR18_RS14825 NONE
JCR18_RS14830 NONE
JCR18_RS14835 3070992 .. 3071007 +    -9  -6.09196   ACCAGAAATAAAAAA              GGAAGC CGAA GCTTCC               TTTTTTTATTTTAAA 100 41
JCR18_RS14860 3077950 .. 3077983 +  -7.7  -3.81755   TACATATAAAAGAAA     GCCTCTTTT-ATCA CGTTAAC TGATGAAAAGAGGC     TTCTATTTAGGCCAT  74 59
        radA NONE
JCR18_RS14890 3084849 .. 3084888 + -16.8  -4.17316   TAACTTAAATAAGTT  CTAAATAAAAAAGCCACA TTAT TGTGGCTTTTTTATTTCG   TTGTTTTCAGGCAAT 100 38
JCR18_RS14920 3092522 .. 3092535 +  -5.3  -4.19577   TTTCTCAGCTCTTCT               GTTTC TAAA GAAAC                TTGTTTTGCGCGTTC  65 167
JCR18_RS14930 NONE
JCR18_RS14935 3094510 .. 3094554 +  -8.2  -4.07246   GTAATTCAAATTTTA GGCTTTCATTCTATTTGTTGT TTTT ATGATAAATAGA-TGGAAGCC TTTAATTTGGCATAC  79 44
JCR18_RS15065 3117649 .. 3117679 +  -2.6  -4.05322   AGTTAGGCAGTATCG       CAACAATAAGTTTT AGA AATTCTTCTTGTTG       TTTATATGGAACTTT  55 459
JCR18_RS15110 3122399 .. 3122421 +  -2.1  -3.34522   GACTAAAACCAGAGC           CTAAACA AAAAGTCAC TGTTTAG           TTACTTCGCACATAT  44 3
JCR18_RS15115 NONE
JCR18_RS15120 NONE
JCR18_RS15125 NONE
JCR18_RS15130 3125543 .. 3125555 +  -3.4  -3.39895   CCACAACAACGGCCA                CAAC TTCGT GTTG                TTGGTTAATAAGGAG  50 5
JCR18_RS15135 3126909 .. 3126932 +    -3  -3.04322   TTTTAGTTTGGTTCG          CAGCAATCGC TGTA GTGATGGCGG           TATTAGGAGGTTGCA  45 81
JCR18_RS15140 NONE
JCR18_RS15145 NONE
JCR18_RS15150 NONE
JCR18_RS15155 3128718 .. 3128729 +    -3  -3.15236   GAATGAAAGAACTTT                CTAT CGCA ATAG                 TTACCTGTGGGTTTA  45 50
JCR18_RS15160 NONE
JCR18_RS15165 NONE
JCR18_RS15170 NONE
JCR18_RS15175 NONE
JCR18_RS15180 NONE
JCR18_RS15185 3130819 .. 3130840 +  -5.8  -4.27316   ATAAGAAAGTAAAAA           CCCCAGTG CGCCAA CACTGAGG            TTTTAAATTCCACCC  69 37
JCR18_RS15190 3131380 .. 3131397 +  -6.9  -5.20783   TTATTCGAATAAAAA             GCGGACT CAAA AGCCCGC              TTTTTCTATTTCACT  88 29
JCR18_RS15215 3140026 .. 3140046 + -11.2  -4.66264   TATGCATAAAAAAAA            GCCCTTGT CATTA ACAAGGGC            TTTTTAAGAATTTTG 100 71
JCR18_RS15230 3142267 .. 3142285 +  -9.6  -5.00642   TTGTATAAATAAAAA             GCTTACCT CTC GGGTAAGC             TTTTTATATGAATTC 100 74
JCR18_RS15245 3145296 .. 3145321 +  -7.7  -3.52762   CTTGTTTAATTTAAA         TACATTCTTCG ATCG CAAAGAATGTA          TTGATTCCTTATTTT  71 149
        htpX 3146353 .. 3146376 +   -14  -5.28481   CGTTTAATGTAAAAA          TAAAGCCTCC AAAT GGAGGCTTTA           TTTTTTGATTACATG 100 43
JCR18_RS15265 3151554 .. 3151572 + -10.3  -6.28967   ATCTTCATAAAAAAA             CAGGGCA ATGAA TGCCCTG             TTTTTTTTATTTATC 100 45
JCR18_RS15275 3153151 .. 3153168 + -11.3  -5.53288   GAAAAATAAAAAAAA             TCCCTGC GAAT GCAGGGA              TTTTTTTGGGTTAAA 100 154
JCR18_RS15305 3169450 .. 3169480 + -15.7  -3.30441   TCTAATTGCTCTATA       TAAAAAAGGTCGC CATGT GCGACCTTTTTTA       TTATGCGGCATCGTC 100 36
JCR18_RS15320 3174378 .. 3174412 +  -8.9  -2.50935   ATTAAAATCCTTCAA    TTAGAGCTAATA-TCA TAAG TGAATGTTAGCTCTAA     CTTAGTGAATAAGCT  71 36
JCR18_RS15325 3174917 .. 3174938 +    -8  -3.31322   CATAACATAAAAAAA           GGCGCTGT TCTCTT ACAGCGTC            TTATAAAAACTTACA  71 36
JCR18_RS15340 NONE
JCR18_RS15345 3177043 .. 3177056 +  -8.1  -5.64274   GGTGTCATAAAGAAT               CCAGC GTAA GCTGG                TTTTTTTATGCCTAA 100 59
JCR18_RS15355 3179191 .. 3179204 +  -8.1  -5.64274   GGTGCCATAAAGAAT               CCAGC GTAA GCTGG                TTTTTTTATGCCTGA 100 59
JCR18_RS15360 3179568 .. 3179590 +  -7.8  -3.14683   CAAAAATTTTGAAAA           TCGAGAGT AATCACC ACTCTCGA           TTCATCACCAACTCT  67 16
        yhbY 3184202 .. 3184213 +    -3   -2.8203   GTTCGTCACGCACAC                TTAG CAAA CTAA                 CTTATTGACTACTTA  43 14
JCR18_RS15390 3184776 .. 3184794 +  -8.9  -5.83226   TTAAAAAACAAAAAA             GCGAGAA ATTAA TTCTCGC             TTTTTTTATTAACTT 100 37
        carA NONE
        carB 3190125 .. 3190149 + -17.2  -5.62552   TTTTTTTCCGATAAG          TCCCGCCACC TTATC GGTGGCGGGA          TTTTTTCATTTTTTT 100 41
        greA 3190689 .. 3190705 +  -9.4  -5.35815   GGTAATACACTTGAA              CCCCTC TTTAT GAGGGG              TTTTTATTTAATATG 100 41
JCR18_RS15415 NONE
JCR18_RS15420 3191953 .. 3191984 +  -6.5  -2.79557   TCGTTAAAACTAAAA      AGCCTGTCTAGCT TAATAC AGCAAGGCAGGCA       ATTATTAAAATACTT  58 34
JCR18_RS15430 3193326 .. 3193351 +  -6.2  -3.36749   TCAAGTCTAGCTATA         CAGCCAAATG GCAAAG CATTTTGCTG          TTCATATTCACCGTC  60 224
        trpS 3220135 .. 3220146 +  -7.2  -5.73339   ATATAAATCAAAAAA                GCCC TACG GGGC                 TTTTTTTATAATTAT 100 55
JCR18_RS15510 3228803 .. 3228821 + -13.2  -3.76232   AAAATTAAAAAAAAA             CGCACATC AAG GATGTGCG             TTCTCTATTTGCGCA 100 422
        gltA 3234436 .. 3234451 + -10.4  -5.96219   CATTAATGTAAAAAA              GCTGCC TAAT GGCAGC               TTTTTTTTATAAATA 100 53
JCR18_RS15550 3236015 .. 3236036 + -14.5  -5.65678   CGTTTATAATTAAAA           GAGGGCATC ATTT GATGCCCTC            TTTTTTCTATTTTAT 100 32
        rpoD 3240503 .. 3240522 + -11.4  -3.62096   AGAAAGAGCTATAAA            CGCCTGCG ATGA TGCAGGCG             TTTCACATGATGAGG  93 82
JCR18_RS15575 3240834 .. 3240872 +   -12  -3.89903   AACTGCGCTTTAATT   TTAAAATGCCATGACA AATTTAA TGTCATGGCATTTTTA   TTTATACCAATCTTT 100 28
        lipB 3241696 .. 3241713 +  -7.1   -3.1243   TGGAATAAAAATATA             TTAGAGT AATT ACTCTAA              ATTTGCTTTTGCATA  64 53
JCR18_RS15585 NONE
JCR18_RS15590 3243503 .. 3243529 +   -11   -5.4492   AAGAAAAAAGCTAAA         GGTCTGATTTTT ATG ACAAATCAGACC         TTTTTTATATCTATG 100 60
JCR18_RS15595 3245127 .. 3245142 + -10.4    -5.626   ATGAATAACAAAAAA              GGCGCT TAAA AGCGCC               TTTTTTTATGGACTC 100 33
JCR18_RS15605 3246218 .. 3246249 + -13.3  -3.60792   TAGAACAAGCTTAAA      TAAAAATAAGGCC ACTAAG GGCCTTATTTTTA       TTTAGAACTTAAGAA 100 27
JCR18_RS15645 NONE
JCR18_RS15650 NONE
JCR18_RS15655 3255571 .. 3255591 +  -9.1  -3.86015   AATAGCGGAAAAAAA            GCAGAACAT TAA ATGTTTTGC            TTTGTACACAAAATG  81 14
JCR18_RS15660 NONE
        adeI NONE
        adeJ NONE
        adeK 3262336 .. 3262351 +  -6.8  -5.45652   CACTTTCTTATAAAA              GCTCAC TTTG GTGGGC               TTTTTTATTGCAACT  93 50
JCR18_RS15680 NONE
JCR18_RS15685 3263673 .. 3263687 +  -2.8  -4.74858   GGGTTTTTCCATCAA               TTTAGC ACG GCGAAA               TCTTTTTTTTATTTC  63 488
JCR18_RS15705 3268300 .. 3268327 + -12.8  -4.74013   AATTAGTTAAATGAA        CCCAGAATCTGT GCAA GCAGGTTCTGGG         TTTTCTATATTTAAA 100 44
JCR18_RS15725 3272343 .. 3272355 +  -6.3   -3.7046   ACAGACCCAGATTTG                TTCCA AAA TGGAA                TTTAGCACTTTTTTC  64 291
JCR18_RS15730 3273588 .. 3273607 +  -9.3  -6.04324   TCTAAAGTGCTTAAG            GCGACGA TACTAT TCGTCGC             TTTTTTATTTTTTAA 100 46
JCR18_RS15735 3274703 .. 3274719 + -10.1  -2.85784   CTGAAATATTAATAA              CACCCTG ATG CGGGGTG              TACTTAATTGCATTA  73 310
JCR18_RS15765 3282176 .. 3282186 +  -5.4  -3.69341   GAACGAATCTGGTCT                 GATG GGC CATC                 TTAATTTATCTTGCC  59 49
JCR18_RS15770 3283191 .. 3283205 +  -4.3  -4.12188   GCTACAGTGGTAAAA               GTGAT ATGAA ATCAC               TTTTACCCATCATAA  60 79
JCR18_RS15775 NONE
JCR18_RS15780 3284621 .. 3284640 +   -10   -5.8901   TTACTTGAAATAAAA            CGGTGACA ATCA TGTCGCCG             TTTTTTCTTTTATAT 100 59
JCR18_RS15800 3289106 .. 3289125 +  -8.6  -5.73978   TTAAAACTATAAAAA            GTCATTGC CTCG GCAATGGC             TTTTTTGTTTATAAT 100 56
JCR18_RS15805 NONE
JCR18_RS15830 NONE
JCR18_RS15835 3295497 .. 3295524 +  -7.1  -3.54158   ATTAAAATAGGGTTA        GAAGACCAC TTTCAAATTT GTGGTCTTC         TTGATTATTCACGTA  68 36
JCR18_RS15845 3297705 .. 3297738 +  -8.3  -2.68775   TCTTTGACCATTTTT     CTTGGATTTATGACA AAAA TGTCATAAAAACAAG      TAACTTTAATAATAG  67 305
JCR18_RS15850 3299556 .. 3299584 + -17.7  -3.80881   AAAAACCAATCTAAA        TAAAAAAGGCGCT ATA AGCGCCTTTTTTA        TTGTGTATTTGTCCT 100 46
JCR18_RS15860 3301142 .. 3301184 + -13.1  -3.61902   CTTGAAAAAATAGTT CGGTATAAAAAAACCACTGA TGAA TCAGTGGTTTTTTT-TACAG TTATATCTCGTACAC 100 28
JCR18_RS15865 3302704 .. 3302728 +  -9.3  -5.26875   CGAGTTAGGAAAAAT          TAAGGGGCTTT AAA ATGGCCCCTTA          TTTTTTAATTGCGCG  95 33
        gatC NONE
        gatA NONE
        gatB 3311033 .. 3311049 +  -8.7  -5.35222   TTTATGCGATAAAAA              CCTCACT TAA AGTGGGG              TTTTTTATGGATTTT 100 62
JCR18_RS15915 NONE
JCR18_RS15920 3313244 .. 3313272 +  -9.8  -3.16564   TCACCCCAAATACAA       TAAAGCCTGC-AT TTAG ATAGCAGGCTTTA        TTACTAAAATAGAAA  76 51
JCR18_RS15935 3315860 .. 3315873 +  -9.5  -3.04125   ATAATCATAAAAAAA               CCCGC TTTC GCGGG                CTCTTTTTACTTATG  76 45
JCR18_RS15970 3323211 .. 3323246 +  -6.9   -4.8622   TGATTAAAGATGCAA    GCAAGCCACTCTCTT AAAATC AAGAGAGTGATTGGC     TTTTTGCTTGACGAA  83 34
        yccS NONE
JCR18_RS15985 3327434 .. 3327463 + -13.1  -3.41051   ATAATTTCACCTCTT       TAAAAAGCCTCCT TTAC AGGAGGTTTTTTA        TTATGCTAAAAATAA 100 37
JCR18_RS15990 3330145 .. 3330175 + -10.6  -5.08601   TCAATAAATAACAAA      GCCGAGTAATAGC CAAAAT GCT-TTACTCGGC       TTTTTATTACAATCA 100 44
JCR18_RS15995 3331421 .. 3331437 +  -7.9  -3.21593   TCGAACCCGCGACCC              CCGGCGT GAC AGGCCGG              TATTCTAACCAACTG  65 408
JCR18_RS16040 3334139 .. 3334149 +  -2.6  -4.04141   TTTTTCCGTTTGTTT                 TTTA ATC TAAA                 TTTACTTCATTATTA  53 82
JCR18_RS16045 3334346 .. 3334364 + -11.8  -6.20267   CTTAACATTTAAAAA             CCTTATCG TTT CGATAAGG             TTTTTTTATTTTTAA 100 47
        dapE 3335590 .. 3335619 + -10.9  -4.37092   TTAGCTCAATAAAAT       AAAAAAGGAACTC AAAA GAGTTCCTTTTTC        TTTTATAAACCAAGT 100 29
JCR18_RS16085 NONE
JCR18_RS16090 NONE
JCR18_RS16095 3349477 .. 3349491 +  -5.7  -3.37091   ACTATCGTATAATCC               GCGTT TTTAT AACGC               TTAACTTTTAGGACT  59 48
JCR18_RS16100 3351237 .. 3351279 + -14.7  -3.06515   GCGTTAATAAATACA TAAA-TAAAAAAAGCAGCTT TTAG AAGCTGCTTTTTTTAATTTA ATTTTACACCTGAAC 100 34
JCR18_RS16125 3354179 .. 3354200 + -10.1  -4.55287   TTTAATAAATTAAAA           GCCCGTGGA TAAA TCTGCGGGC            TTTTCTATAGATACA  93 46
JCR18_RS16130 3355020 .. 3355048 +  -9.7  -4.52873   AGTAAAATAATCCAA        TACGCCATTCT CTTAAGT AGAGTGGCGTA        TTATTTTTCTCCACA  91 31
JCR18_RS16135 3356035 .. 3356048 +  -9.5  -5.07652   AGTAAAGAGACAATA               GCCCC TCAT GGGGC                TTTTCTTTTACCACC 100 39
        mutM NONE
JCR18_RS16175 3363848 .. 3363878 + -14.3  -2.78351   TAAAATGCTATGTAA       TAAAAAACGGTAC ACTAG GTACCGTTTTTTA       TACTTAAATACTTTT 100 483
JCR18_RS16195 3367976 .. 3367995 + -12.2  -3.99374   TTTAATTTTGATTAC            TGCCCAGT TTTC ACTGGGCA             TTCTTCTTCATGAGA 100 46
JCR18_RS16200 NONE
JCR18_RS16205 3370734 .. 3370749 +    -9  -5.65177   TGCTCGAATTTAAGA              CCTAGC ATTC GCTAGG               TTTTTTTATGCCTAT 100 246
JCR18_RS16210 NONE
JCR18_RS16215 3372240 .. 3372257 + -11.3  -5.27779   ATCGCCATAAAAAAA             GCGACTC TAAC GAGTCGC              TTTTTTACTGTTCAA 100 108
JCR18_RS16225 NONE
JCR18_RS16230 3375552 .. 3375567 +    -9  -5.24129   AAACCTTTTTTAAAA              TCCCAC TTCG GTGGGA               TTTTTTATGAAAAAA  95 44
JCR18_RS16235 3376111 .. 3376144 + -11.2  -3.57971   ATACTTAAATCTTTA     GCCCTTATAGAGAT CTCAGT GTTTCTATAAGGGC      TTTAAACATCGATAT  89 33
JCR18_RS16270 3385205 .. 3385223 + -13.2  -5.36441   TTAGTTTCACATTTA             GCCCAAGT TCA ACTTGGGC             TTTTTTGTATCGCCA 100 54
JCR18_RS16275 NONE
JCR18_RS16280 3388749 .. 3388777 +   -12  -5.38054   ATTGCATAAACCTTA        CCCATATAAATA TATTT TATTTATATGGG        TTTTTCTTTATGACC 100 65
JCR18_RS16285 NONE
JCR18_RS16290 3390490 .. 3390504 +  -6.4  -3.41527   GCAGCCAATATTTTC               GATCGG CAG CTGATC               TTGTAATAACAATTC  62 511
JCR18_RS16305 NONE
JCR18_RS16310 3393918 .. 3393938 +  -7.6  -5.36441   CCCTGATATAAAAAA           GCCGGTTCA AAAT TGA-CCGGC            TTTTTTATATAGAAC 100 54
JCR18_RS16325 3398460 .. 3398477 +    -7  -5.86332   ATTTCCATCTCAAAA             GCCATC TCACCC GATGGC              TTTTTTTTACATTAA 100 184
JCR18_RS16330 NONE
JCR18_RS16335 3400364 .. 3400374 +  -8.2  -2.91869   TGTCCGCTTCTGCTT                 GGCG CTT CGCC                 TCTGCTGCTTTCTTA  62 439
JCR18_RS16365 3406288 .. 3406304 + -10.9  -3.70919   GAAGCATTTTGGCAA              GCAGGTT TAT AACCTGC              TTGTTACCATTTCGC  89 14
JCR18_RS16390 3412020 .. 3412048 +  -4.7  -5.47159   CTTAACTCCAGTTTC       GGGG-TAATGTT CTGACC GACATTATCCCC        TTTTTTATGTTCAGG  82 69
JCR18_RS16395 3412671 .. 3412694 +  -5.4  -3.28712   AGATTAAGTTAAGAA          TGATCTCT ACGTTTAA AGAGATCA           TTATCAAAAAGAACG  56 45
JCR18_RS16400 3413448 .. 3413463 +    -9  -5.49579   TTTAAATATAAAAAA              GGTGGT ATTG ACCACC               TTTTATTTTTTCTCG 100 36
JCR18_RS16410 3415396 .. 3415428 + -13.6  -5.57054   GTGTTTATCCCGAAA      TAGCACCTGTAGAG CCATA CTTTGCAGGTGCTA      TTTTTTTGGCTTGTT 100 44
JCR18_RS16415 3416949 .. 3416980 + -10.3  -2.80077   TTTTTTATCCACATT      TTCTGTGGATAAC ATTGTG GTTATCCACAGCA       TAACTTTTCTAAGCA  81 41
JCR18_RS16430 3419891 .. 3419916 + -17.7  -3.93136   CTAAAAACAGTAAAA         CAAAAGGCGCC AGAA GGCGCCTTTTG          TTTATACATAACTAT 100 43
JCR18_RS16435 3422006 .. 3422028 +  -4.9    -5.626   TTAAAAACCAAAAAA          GGACTGCTCA GTTT TGA-CGGTCC           TTTTTTTATAAAATC  85 66
JCR18_RS16440 3423925 .. 3423957 + -11.6  -3.99324   CGTAATTAAATTTTT     TATAAAAACGCCTGA ATAA TCAGGCGTTTTT-TA      TTTCTAATCATAAAA 100 36
JCR18_RS16450 3425753 .. 3425783 + -10.7  -4.83032   TGAACTAAATTTCAA      TAAAAA-CGCCTGA ATAA TCAGGCGCTTTTTA       TTTTGTATTTACTAT 100 80
JCR18_RS16455 3426347 .. 3426363 +  -5.8  -6.09196   GTTGGCATAAAAAAA              TGGCCT CAAGC GGGCCA              TTTTTTTATTTTACG 100 31
JCR18_RS16465 3427665 .. 3427677 +  -4.1  -3.53224   ATCCACGCTCATCTG                TCTAC CTT GTAGG                TTTGACCACGAAGTA  52 316
JCR18_RS16480 3432098 .. 3432114 +    -3   -5.2422   CAAATTGCTCATTTT              TAGCTA AATTA TAGCTG              TTTTTTGATCTAGTT  71 58
        aspS 3434015 .. 3434063 + -11.4  -4.44819   AGAAAGAAGCTTAAT TGCTCTTTAATAAAAAACCCTGC AATT GCAGGGTTTTTTATTAA-GAAAA TTTTAATGTGTTATC 100 27
JCR18_RS16495 3435887 .. 3435903 +  -5.1  -2.78776   CCAATAGTAACGCCA              GAACAAG AGA CTTGCTC              ATCTTTTGCAAGATT  50 397
JCR18_RS16510 3438266 .. 3438297 +  -7.3  -2.83299   TTAAGCGTCTGCTCA      GCCATGGCTGGTAC AGTCA GT-TCAGCCTTGGC      CTTTGCATATAGTGG  60 65
        queA 3449678 .. 3449721 +  -6.9  -3.00774   AAGTTTAAAGATTAA AGCTGGGTTAAATCTTA TTAGTTAATT TGAGGTTTAACCCAGCA TCTATAATTAAAATA  62 33
JCR18_RS16565 NONE
JCR18_RS16570 3451527 .. 3451550 +  -6.8  -4.46926   GAGGTAAAAAAGCAA          TCGGTCAA CCGGAAAT TTGACCGA           TTTTATAGTCAGCTA  78 43
         tgt 3452875 .. 3452888 +  -6.7  -3.09579   ACGAATTAGGATTAT               GTCAG GTAT CTGAC                TCATATTTTTTAACT  62 82
        yajC 3453257 .. 3453274 +  -9.1  -4.98531   TTTAATCATAAAACA             GTCGTGC TTTA GCACGGC              TTTTTCATTTAAGAA  95 36
        secD NONE
        secF 3456199 .. 3456215 +  -9.4  -6.01187   GAGACTATAAAAAAA              CCGCGA TTTAT TCGCGG              TTTTTTTATTTGGTT 100 51
        radC NONE
JCR18_RS16605 3459740 .. 3459752 +  -6.3  -3.86015   TGGTAATCCGGTCTG                GTTGA TTT TCAAC                TTTATCGAGCACATC  66 482
JCR18_RS16615 NONE
JCR18_RS16620 NONE
JCR18_RS16625 NONE
JCR18_RS16630 3463550 .. 3463563 +  -8.1  -5.60993   GGTCCCAATAAAAAA               GCACC CGAA GGTGC                TTTTTTTATGCGCCC 100 58
JCR18_RS16640 3464453 .. 3464463 +  -2.6  -3.09289   TACAATTTAATAACT                 TTAA AGA TTAA                 TGTCTTAGCATGATA  43 15
JCR18_RS16645 3465006 .. 3465025 + -10.8   -5.4756   TAAAGATATAAAAAA            GCCCAAAT TCAA ATTTGGGC             TTTTTTATTACGATT 100 38
JCR18_RS16665 3467332 .. 3467357 +  -9.9  -5.86061   TAAATAAATTCATAA         GCTCTATTTTT ATTT AAAGATAGAGC          TTTTTTTTAATAAAA 100 38
JCR18_RS16675 3470758 .. 3470785 + -14.2  -3.62096   TTTACCCAAAAAAAA        CACCCCAACCTC TTTT GAGATTGGGGTG         TTTAGAATAATGAGC 100 186
JCR18_RS16705 NONE
JCR18_RS16710 NONE
JCR18_RS16715 3478922 .. 3478941 +  -7.9  -5.86976   TTCCATTATAAAAAA            GCCAATC CTTTGT GATTGGC             TTTTTTATTTTATAC 100 44
JCR18_RS16725 3481702 .. 3481735 +  -6.1  -2.73123   TATGTAATTAAATTT     TTGGCTTAAGTACTT TTTT ATGTAATTGAGCCAA      TCCTTCAACCATTTT  57 34
        hflX NONE
JCR18_RS16740 3484462 .. 3484472 +  -2.6  -3.07537   TGGTTATAAGGAGAA                 TAAA ATG TTTA                 TGATTCTTTATGGAT  43 32
JCR18_RS16745 3485196 .. 3485213 +  -2.7  -3.78682   TACAAATAAGATGGA             CCTTTCA AATC TAAAAGG              ATTTTTTGATTATGG  51 81
JCR18_RS16750 3485688 .. 3485701 +  -9.5   -5.8187   CTTAAAAATAAAAAA               GCCGC TTCA GCGGC                TTTTTTTATTACATA 100 45
        rplM NONE
        rpsI 3489394 .. 3489412 + -10.3  -5.57396   CGAATCGGACAAAAA             GCCTTGG TTTTC CCAAGGC             TTTTTTATTGCTTAT 100 50
JCR18_RS16780 NONE
JCR18_RS16785 NONE
JCR18_RS16790 3491321 .. 3491336 +    -9  -5.38497   TTTTTTATAATTAAA              GGGAAC GTAT GTTCCC               TTTTTTGATTTAAAT 100 44
JCR18_RS16825 3500531 .. 3500548 +  -6.3  -3.33737   CTTTGAAATAAAAAA             GGTGG-CT CAA AGTCCACC             TTATAAGAATTAATA  61 30
JCR18_RS16885 3512497 .. 3512516 +  -2.2  -4.20516   AAACTCAATTTGGGT            TTAAAAGA AAGC TCTTTAAA             TTTCTTAAATGGACC  54 22
JCR18_RS16890 3513097 .. 3513146 + -18.3  -5.04385   TAAGAACTCACTAAC TTATGAATGAAAAAGGCCTGTTA ACTA TAACAGGCCTTTTTCATTTGTTA TTTTTTCACACTATC 100 27
        miaB 3519178 .. 3519188 +    -4  -3.08679   ATTCTAAAGTCTACT                 GAAA GGT TTTC                 TCTTGACTGCAGCGA  48 50
JCR18_RS16920 NONE
        ybeY 3520821 .. 3520846 +  -6.2  -5.30155   AATACATTTTAAAAA         TGTGGATATC CTAAAA GTTATCCACA          TTTTTTCATTAATGA  84 81
JCR18_RS16935 3522766 .. 3522777 +  -4.4  -2.87683   ATAGATGCATCAGCA                CTGA CCTA TCAG                 TCTGTACAAGGATAT  49 150
JCR18_RS16940 NONE
JCR18_RS16945 3524179 .. 3524194 + -10.4  -5.46657   AGTTTAAATAAAAAA              GAGCGG AAAC CCGCTC               TTTTTTATTGCCATA 100 44
JCR18_RS16955 3526356 .. 3526385 +  -8.5  -2.77222   ATACTCAACTAAAGT       CAGGGCTTAGCTG CTGT TAGCTTTGCCCTG        CTTTAGACTCATGAT  69 40
JCR18_RS16965 3528202 .. 3528226 +  -7.3  -3.73107   AGTATAATAAAAAAA          CCCTATTAT CCGGTTA ATAATAGGG          TTTAAAGTTTAATAA  70 51
JCR18_RS16980 3530694 .. 3530704 +  -2.6  -5.86332   ATTGCCTATAAAATG                 TATT TGA AATA                 TTTTTTTTCAATTAA  79 371
JCR18_RS16990 3533633 .. 3533659 + -13.9  -5.28755   TTTAATAATTACAAA         GAAAGCCACTT TATAT AAGTGGCTTTC         TTTTTTAATATATTT 100 36
         rnr 3537380 .. 3537408 + -11.1  -4.60924   ATTTGCATTAATTAT        GATTAAGCTCCCA AAA TGGGGGCTTAATG        TTTTTAAAACGTTTA 100 50
JCR18_RS17020 NONE
JCR18_RS17025 NONE
JCR18_RS17030 3540268 .. 3540288 + -10.5  -5.68438   GATATGATGCAAAAA            GCTAGTTCA CTC TGAGCTAGC            TTTTTTATTTACTAA 100 57
JCR18_RS17060 3547290 .. 3547318 + -17.7  -4.16943   CTTTAATCTTTACTA        TAAAAAGGAGGCT TAT AGCCTCCTTTTTA        TTTTCGAATATCAAG 100 35
JCR18_RS17215 NONE
JCR18_RS17220 3566516 .. 3566540 + -10.2  -5.16472   AAATCAGTATATTAA          TTTAAGGGAT TTTAT ATCCCTTAAA          TTTTTTAAGGTTTTT 100 52
JCR18_RS17225 3567462 .. 3567472 +    -4  -4.78107   AAGATGATCAACCTC                 CTAA CCT TTAG                 TTTTTGGTGATCATG  68 88
JCR18_RS17230 NONE
JCR18_RS17235 NONE
JCR18_RS17240 3569876 .. 3569923 + -13.8  -3.11192   GCTGAATTACAAGCA GCTTAAAATAAAAAAGCAGGAT ATAA ATCCTGCTTTTTTATTTAGAGA TTAGATACTGATATC 100 20
        plsB 3575025 .. 3575060 + -13.6  -2.86164   CTTAAAGTCTTCATG    CAAAATAAAAGGCAAC TTAA GTTGCCTTTTATTTTA     TCTACTCATTGGACA 100 36
        recG NONE
JCR18_RS17275 3580112 .. 3580128 +  -8.1  -4.52589   ATATTGCTCAAATTG              TTGAAGA ATA TCTTCAA              TTTTGTCTGAGGCAA  82 504
JCR18_RS17290 3581830 .. 3581865 + -13.6  -3.78775   CCCGCAAATTTTGTA    TATAAAAAAGCACCTA AATT TAGGTGCTTTTTTATC     TTTGCTCATCAAACC 100 51
        ribA 3591538 .. 3591575 +  -8.7  -5.68039   ATTTAAAAATTATAT   TTAAGGGATTTTTTC AGGAATTA GAAAAAATCCCTTAC    TTTTTTTATGGATTT 100 54
        hemF 3592599 .. 3592632 +  -8.3   -5.4387   CTAATTTTTTGTTTT     GGGGATTCTTT-GGCT TCC ACCCTAAAGAATCTCC     TTTTTTGATTTCTAT 100 37
        aroE 3593559 .. 3593578 + -10.8  -5.50925   CTATAAACCAAAAAA            GAACCTAC ATAT GTAGGTTC             TTTTTTATCTTACTT 100 35
JCR18_RS17360 3598006 .. 3598027 + -13.1   -5.1166   CTCTAAAATCAAAAA           GAGCGCAAT TGAT ATTGCGCTC            TTTTTGATTTTGCTA 100 52
JCR18_RS17370 3599229 .. 3599259 +  -9.2  -5.88197   TAGTTTATTTTGGTC      GCTACGGTTGCAT CCCCTA AT-CAACCGTAGC       TTTTTTTATGTTTAA 100 47
JCR18_RS17395 NONE
        glyQ NONE
JCR18_RS17405 3606708 .. 3606734 + -12.5  -5.15969   TAGCTTATTATGAAA         TAAAGGGATCT TTTAT AGATCCCTTTA         TTTTTTGAGTTAAAC 100 42
JCR18_RS17420 3609050 .. 3609067 +  -2.7  -2.71681   TAACAGTAAGATCAG             CTATCCA TATT TTGATAG              TCATTGGGGAGATTA  40 134
JCR18_RS17425 NONE
JCR18_RS17430 NONE
JCR18_RS17445 3613208 .. 3613223 + -10.4  -6.04953   TTAGCAATAAAAAAA              GGGCGA TTCA TCGCCC               TTTTTTTATTTGTCT 100 46
JCR18_RS17490 NONE
JCR18_RS17495 3626389 .. 3626407 + -11.8  -5.38497   TGCATGCAATAAAAA             GCCTTCTT ATA AAGAAGGC             TTTTTTAATTTAAAT 100 47
JCR18_RS17510 3628379 .. 3628399 +  -4.8  -4.68908   ATTGAAGATAAATCT           GAG-TGGTT CTAA AACCATCTC            TTTATTTTAGGTGGG  69 14
JCR18_RS17515 NONE
JCR18_RS17520 3630338 .. 3630365 + -12.2  -4.59591   GTGCTTTTTTTTAAA        TTGTGGGTATCT AAAA AGATATCCACAA         TTTTGCTATTTTATT 100 41
        yccS 3632676 .. 3632697 + -11.7  -5.58454   AAATAGAATAAAAAA           TACCGGAAT ATAA ATTCCGGTA            TTTTTTTAATGTAAG 100 35
JCR18_RS17540 NONE
JCR18_RS17545 3635825 .. 3635842 +  -8.5  -5.37345   TAAGAAATAAAAAAA             GACGATA TATT TATCGTC              TTTTTTATGCTTAAG 100 43
        serA 3639358 .. 3639377 +  -9.3  -5.30686   ACTGTAAATTTAAAA            GCCACAG CATTGT CTGTGGC             TTTTTTATAGGTATT  95 46
JCR18_RS17565 NONE
JCR18_RS17570 3641492 .. 3641502 +  -5.4  -3.05844   GCTCGACCAACTCAT                 CCAT TTC ATGG                 TGTTCAGATAAAGCA  53 245
JCR18_RS17590 3644858 .. 3644871 +  -4.5   -3.4072   GCCAAACCTTATCCA               GCAGT AGAA GCTGC                TTCTCATACAAAATA  54 61
JCR18_RS17595 3645896 .. 3645911 + -10.4  -5.17353   TTTAAAACAAAAAAA              TGCGCC AAAA GGCGCA               TTTTTTACTCGCTAT 100 43
         gmk NONE
        rpoZ 3658133 .. 3658152 +  -5.7  -5.67283   TGTTTCTATAAAAAA            CCATCGT TTTTTT GCGATGG             TTTTTTATTTGGCTT  90 48
JCR18_RS17675 3660477 .. 3660508 + -11.8  -3.40403   ACCTAATCAATTAAA      TCGATGATACTTTT GTCA AAACGTATCATCGA       TTATGATGAAAAAAG  91 79
JCR18_RS17680 3661008 .. 3661019 +  -3.6  -4.45201   GTAACTCTCAGATTT                CCGC TTAG GTGG                 TATTTTTTTATCCAA  61 106
JCR18_RS17685 3661371 .. 3661410 +  -7.2  -5.75342   TTATTGACTCCTCCA  CCGCTTT-TTGCGGAACGT TAA ATGTTCCTCATTGAAGCGG  TTTTTTTTGGAAGGA 100 65
         bfr 3662056 .. 3662075 + -12.2  -6.28967   TTTCTCATAAAAAAA            TCCCCTTG TATT CAAGGGGA             TTTTTTTTATTTATC 100 41
        ponA 3686347 .. 3686362 +    -9   -5.4756   AATAAAAATAAAAAA              GCCATC GTTA GATGGC               TTTTTTATTACGCTT 100 36
JCR18_RS17830 3696628 .. 3696652 +  -7.3  -3.53224   CACACTTCTTAATAT          TTGAAACGA CCCCTCA TCGTTTCAA          TTTCAGCCCAGACTG  68 29
JCR18_RS17835 3698305 .. 3698321 +  -2.9  -3.14564   TTGCGCTCACACAAA              CTGGGGT CAT AGCTCAG              TTGGTAGAGCGCTAC  45 81
JCR18_RS17840 3698369 .. 3698385 +    -8  -3.15228   CAGCGGTTCGATCCC              GCTTGG CTCCA CCAAGC              TCCTTTGTGTTTGCC  70 12
JCR18_RS17845 3698566 .. 3698585 +  -2.2  -2.72632   TTGATTGCACATTTG            TCTATTTT ATCT AAAATAGC             GTCTTTCTCAAATTC  40 108
JCR18_RS17850 3700052 .. 3700070 +  -8.9  -5.95166   TTTGTAATTTAAAAA             GTGTAGC AAAAA GCTACAC             TTTTTTTTGCTTAGA 100 44
JCR18_RS17855 NONE
JCR18_RS17860 NONE
JCR18_RS17865 3701362 .. 3701383 +  -7.3  -5.60689   GCCAAATTCTAAAAA           GCCACTG CATAACGA CAGTGGC            TTTTTTCTTATCTAG 100 37
JCR18_RS17875 3703007 .. 3703039 +   -10  -2.60904   GGGAAATTTAAAACT      ATATTCACATCAGC TTAAT GCTGATGTGAATGC      GTCTTGTCATTATCG  77 30
JCR18_RS17925 3712960 .. 3712985 + -10.5  -3.56862   TTACTAATCTAAAAA         CAAAACCAGCC CTTA GACTGGTTTTG          TTTAAGAAAATTTCT  85 47
JCR18_RS17930 3713669 .. 3713684 + -10.4  -4.81249   CCTTCTAACAAAAAA              CCAGCC CTTA GGCTGG               TTTTTAAATTTAGCA 100 33
JCR18_RS17940 3716962 .. 3716980 +  -6.7  -5.93252   AAACCCATCTAACAA             GCCTCTG GAATA TAGAGGC             TTTTTTATTTTTAAG 100 46
JCR18_RS17945 3718125 .. 3718166 +   -17  -3.82202   AAATATTCAGCGAAC TTAAATAAAAAAGCGCCT CATGAA AGGCGCTTTTTTATTTGA  TTCTATTTACGCATC 100 45
        ompR NONE
JCR18_RS17965 NONE
JCR18_RS17970 NONE
JCR18_RS17975 3727633 .. 3727650 +  -9.1  -5.76237   ATACTTTTAATTTAA             GCACTCC TACA GGGGTGC              TTTTTTATTTGTGTA 100 44
JCR18_RS17980 3728314 .. 3728336 + -16.4  -4.65168   ATAGGCATGAAAAAA           GCCCCATACT TTA AGTATGGGGC           TTTTTCGAATATGGT 100 163
        hisB NONE
        hisH 3730447 .. 3730473 + -10.2  -6.02919   ATTCAAAAACTAAAA         CAGATCAGGTCA AGA TAGCCTGATCTG         TTTTTTTATTTATAA 100 45
JCR18_RS18010 3731146 .. 3731169 + -12.6  -3.32498   TTTTAAAGATGTACA          TAAAGCCTAG TTCT CTAGGCTTTA           TTCATATATAAAGTG  90 42
JCR18_RS18015 NONE
        hisA 3732696 .. 3732725 + -15.3  -3.24747   TAATTTTTTAAGATG       TAAAAAAGAGCCT GATT AGGCTCTTTTTTA        TTGCTGATATGAAAA 100 38
JCR18_RS18030 3734302 .. 3734332 + -14.3   -3.0246   AAAAGAGTCCGAGAA       TAAAAAAGAGAGC TTAAC GCTCTCTTTTTTA       TATATCACTTTTCTT 100 23
        hisF 3737550 .. 3737574 + -15.9  -5.24129   TAAGTTTATTTATAT          TTAAAGGGGCA AGA TGCCCCTTTAA          TTTTTTATGCAGCAC 100 38
JCR18_RS18065 3739412 .. 3739427 +  -3.3  -3.34344   ACATGCTTAATTTTT              TGTGA CGTATT TCACA               TTAATTAAAAAATAG  48 106
        aqpZ 3740511 .. 3740522 +    -3  -3.20236   TCACGCATTCGACAT                CATT TTCT AATG                 TTAAATCTTCAATTG  44 383
JCR18_RS18090 3743112 .. 3743129 +  -9.9   -5.8187   CGAGCCATAAAAAAA             CCAAGAC ATAT GTCTTGG              TTTTTTTATTACATC 100 43
JCR18_RS18100 3745248 .. 3745271 +  -5.4   -5.4833   CCAGAATTCAAAAAA          GACCTA-ATCG TTT TGATTTAGGTC          TTTTTTATTGGCTAA  84 38
JCR18_RS18120 3748161 .. 3748185 +  -5.8   -5.4593   TAGAATTATTTAAAA          GGCTTAAATT TAAGT AAATTAAGCC          TTTTTATTATTTTAA  86 290
JCR18_RS18150 NONE
JCR18_RS18155 3754048 .. 3754066 + -10.3  -5.69793   CAACCCATAAAAAAA             GTCCGAC TCAGT GTCGGAC             TTTTTTATTTAGTCT 100 45
JCR18_RS18170 3756366 .. 3756407 +  -5.9  -2.50307   GCCGATTTCATTTAT TTCGTTGGCGTGGTGGCAAG CCA CTTGC-ACCACACTGGCAAA GTTAATCGCCATTTG  54 40
JCR18_RS18180 NONE
JCR18_RS18185 3758962 .. 3759000 +   -17  -3.95584   AATTCGTTAATAAGA   AATGAAAAAAGCCCAACA TCC TGTTGGGCTTTTTTCGTA   TTTCGTTACTAGGCA 100 136
JCR18_RS18210 3764284 .. 3764309 + -13.5  -3.29324   AAGTTCTACTGCCAA         GATTAGAATGC TTAA GCATTCTAATC          TTACATTTAAATGGG 100 39
JCR18_RS18215 3765275 .. 3765298 + -12.5  -5.60993   ACTTAAATAAAAAAA          CCGGTCATG AATGGG CATGACCGG           TTTTTTTGTGAAACA 100 35
JCR18_RS18230 3769794 .. 3769812 + -13.2  -5.63517   TAAAACAAACAAAAA             GAGCCTCA CAG TGAGGCTC             TTTTTTATTTAAAAA 100 55
JCR18_RS18245 NONE
JCR18_RS18250 3773217 .. 3773233 +  -9.4  -4.60924   TTGAATAATAAAAAA              GGCGAG ATAAA CTCGCC              TTTTTCGAAACTTTG  93 33
        tenA 3777426 .. 3777453 + -12.2  -3.64028   AAAATAAGATGAGTT        CTGACCATTTAG TTCA TTAAATGGTCAG         TGTTTAATTTAACTT  95 39
        uvrA 3782994 .. 3783009 +    -9  -5.77856   GAAGTAATCAAGAAA              GGAGTC TTAG GACTCC               TTTTTTTCGTTTATT 100 34
    omp33-36 3788365 .. 3788380 +    -9  -5.65177   TTGAATTAAAAAAAA              GGACTC AATT GAGTCC               TTTTTTTATGGCTAT 100 54
JCR18_RS18335 3797128 .. 3797161 + -14.7  -3.61715   CAGACTAATCATTTA     TCGCTTCCCAACCTT TGAT AAGTTTGGGAAGCGG      TTCTTGGCAAAAATG 100 33
JCR18_RS18340 3798292 .. 3798321 + -15.3  -4.57275   CCTAAGTGGAACATA       TAAAAAAGACCTC AATT GAGGTCTTTTTTA        TTTTAGATTTTTTTA 100 36
        msuE NONE
        sfnG 3801524 .. 3801534 +  -6.8  -3.02511   TTTCTTCGTTGAATG                 GCGT ATT ACGC                 TATTCAACGACTCAA  59 304
JCR18_RS18370 3803728 .. 3803769 + -13.3  -3.35185   GCAAAATTTTAAACA GGTTTAATAAAAAAGCCCC TATC GGAGCTTTTTTATTAAAAC  GTTATTTTTGTCTAT 100 29
JCR18_RS18380 3806658 .. 3806676 +  -3.1  -2.76941   ATCTCCTACTATGAT             GGAAGCT GAAAA GGCTTTC             TGAATTTATTCAATT  42 93
JCR18_RS18385 3807718 .. 3807747 + -13.7  -5.24129   TCGGTTCTTAAAATA       CGGTTGCCTAAGCT CAT AGCTT-GGCAGCCG       TTTTTTATGAGCAAA 100 60
JCR18_RS18415 3813694 .. 3813711 + -11.3   -5.9003   CTAGATTAAAAAAAA             TCCGCTC AATT GAGCGGA              TTTTTTTATTGATTT 100 47
JCR18_RS18450 3822830 .. 3822848 + -10.3  -4.98522   TTACCTATAAAAAAA             CGCACTC TTAAT GAGTGCG             TTTTTATATAAGCTT 100 43
JCR18_RS18480 3830345 .. 3830360 +  -6.2  -2.56432   GAATCGTTCTTAATA              TGTGAT AAAA ATCACA               CTTACTAATGTTACA  56 63
JCR18_RS18525 3840013 .. 3840059 + -17.7  -2.70932   TCAAAAATAATGCGT GATTTTAGAGGGGGCATTTTTA TCAA TAAAAA-GCCCCCTCTAAAACC TAATTAACAAGAAAA 100 24
JCR18_RS18530 3842448 .. 3842473 + -11.3  -5.63236   AGTAAATATTAAAAA         GGCATACC-CTA TTT TAGAGGTATGCC         TTTTTGTTTTTAGAT 100 40
         xth 3844150 .. 3844168 +  -7.6  -3.55071   CGTAGGAAGATAAAA             TAAACTTA AGA TAAGTTTA             TTTGCAAGGATGTGA  71 179
JCR18_RS18545 3844801 .. 3844830 + -12.3  -3.78087   AAAACTTAAGCGCAT       AAAAAAACGAGCC CAAT GGCTCGTTTTTTA        TTTAAGCTTTTAGTT 100 24
JCR18_RS18555 3846343 .. 3846383 + -14.3  -4.59773   ATAAGACGTAATCAA  AATGAAGAAGTGACAAATT TAA AATTTGTCACTTCTTCTTA  TTTTTCACAATCCAA 100 30
JCR18_RS18560 3847917 .. 3847935 +  -3.8  -4.14243   AGTAAGGTGCAAGAG             CCGTCTGA ACC TCAGATGC             TTTTAAAATACGATG  61 235
        puuE 3852644 .. 3852696 +  -4.4  -4.58685   TCAAATCACTCTTGG CACTGTTATTGCTAAAACTCTATAT CACG ACAACGAGTTT-AGGAATAACAGTG TTTTTAGCCGAGTTT  68 75
        uraD NONE
        uraH NONE
JCR18_RS18600 3854928 .. 3854943 +  -4.6  -5.77853   GTTAGTTTTTTAGCG              CCCCAC TTCG GTGGGC               TTTTTTTTAACCGTT  87 44
JCR18_RS18605 3855780 .. 3855801 + -13.1  -5.65496   ATTTAGAAGATAAAA           CAGCAAGGA AAAC TCCTTGCTG            TTTTTGTTTTTAATC 100 48
JCR18_RS18615 NONE
JCR18_RS18620 3858680 .. 3858707 + -11.6  -3.78953   AAATTACTGTCTAAA        TTAAAATAGACA AATC TGTCTATTTTAA         TTTAGTGATCAAAAT  95 27
JCR18_RS18640 3864077 .. 3864094 + -11.3  -4.64598   GAGACGTAAAAAAAA             GCCCAAC TTAT GTTGGGC              TTTTTACACTAATTA 100 32
JCR18_RS18670 NONE
JCR18_RS18675 NONE
JCR18_RS18680 NONE
JCR18_RS18685 NONE
JCR18_RS18690 3877777 .. 3877806 + -10.9  -4.17523   TGCATTAAACCTTAT       AAAAAAAGCCATC AATT GATGGCTTTTTTC        TTTTAAACCTTATTT 100 43
JCR18_RS18700 3879643 .. 3879653 +    -4  -3.75105   TGCGCTTGCCGTATT                 TTTG TCA CAAA                 TTATTGCTAAATTCG  53 151
        phoB NONE
        phoR 3881877 .. 3881897 +  -8.3  -5.28826   CTTCAAATATAAAAA            GCCGACT CATGAAA AGTCGGC            TTTTTTATAAGATTT  93 51
JCR18_RS18720 3884116 .. 3884140 + -11.5  -4.70626   TTGGACTAAATAATT          AAAAAGGGAGC GCA GCTCCCTTTTA          TTTTTAAAATTATTC 100 28
JCR18_RS18750 3890068 .. 3890081 +  -8.1     -6.13   ATAGATATAAAAAAA               CTCCC GATC GGGAG                TTTTTTTTTAGATCT 100 37
JCR18_RS18770 3894187 .. 3894204 + -11.3  -5.72616   TTGTGCGCATTTAAA             CCTAGCC ATTC GGCTAGG              TTTTTTTATCTAAAT 100 48
JCR18_RS18775 NONE
        ribE NONE
        nusB NONE
        thiL NONE
JCR18_RS18795 NONE
        glmU NONE
        glmS 3901172 .. 3901200 +  -9.6  -4.89852   TAACTGATTTATTAA        GCCCGATATGCA TTAAT TGCCTATTGGGC        TTTTTATAGCTCTAC 100 79
JCR18_RS18860 3914861 .. 3914879 +  -7.4   -5.4505   AATCATAAAAAATAA             GCCCCT TGAAAAT AGGGGC             TTTTTTATTAAGCGA 100 33
        fahA NONE
        maiA NONE
JCR18_RS18890 3921404 .. 3921452 + -12.8  -4.40333   CAATCGTTTTAAAAG TCGGCATTGATG-GGAATAGTTT GAAT GAACTGTTCTATATCAATGCCGA TTTATATTGTTTAAA 100 52
JCR18_RS18895 3922474 .. 3922492 + -13.2  -5.53288   AATAGCCATAAAAAA             CCAAGAGC ATT GCTCTTGG             TTTTTTTAGATTAGA 100 43
JCR18_RS18905 3924556 .. 3924576 +  -5.4  -3.28416   AAGAATGGTTAACAG            CACACCCT CTTTA AGGTTGTG            TTGATCTACCTAATC  56 12
JCR18_RS18925 NONE
JCR18_RS18930 3929584 .. 3929604 +  -5.4  -5.75342   TTACCAAAATTGGCC            AGCCTAGT CGTTT ACTAGGCA            TTTTTTTTAAAAAGG  91 19
        purC 3930368 .. 3930385 +  -8.4  -6.09196   CAACTTTATAAAAAA             CCGAGC ATTTCA GCTCGG              TTTTTTTATTTTCAG 100 47
JCR18_RS18940 3930796 .. 3930822 +  -2.3  -4.84492   CAACGTTACACTTTT         TATAGCAGGCT GATTG AGTTTGCTATC         TTTTCTTATACTTAA  62 79
JCR18_RS18945 3931875 .. 3931888 +  -3.9  -3.21925   AACAATAGCAGGAAA               CAATA AAAC TATTG                TTCCTGCTGCCATCT  49 33
JCR18_RS18965 3935371 .. 3935388 +  -8.5   -5.8187   TGACCATATCAAAAA             GAAGGAA CTCG TTCCTTC              TTTTTTTATTGCATA 100 49
JCR18_RS18970 3936399 .. 3936410 +  -7.2  -2.84602   AGCCTAGTCTTATTT                CCCG CACT CGGG                 GTTTAATGGAATAAC  63 168
JCR18_RS18975 3936823 .. 3936851 + -16.9  -4.39568   TTTTTACTCATAGAA        CAGGGACTACATT TTT GATGTAGTCCCTG        TTTTCATATGTCCAT 100 44
        mutY NONE
JCR18_RS18985 NONE
JCR18_RS18990 NONE
JCR18_RS18995 NONE
JCR18_RS19000 3940617 .. 3940627 +  -3.2   -2.7556   ACCAAAAACATGGCC                 CGGT ACC ACTG                 TAATTCCCTGAGCTT  44 166
JCR18_RS19010 NONE
JCR18_RS19015 3942466 .. 3942476 +    -4  -4.67608   ATGGATGCTTTGATA                 TTGA TGC TCAA                 TTTTGTCTTCAAATA  69 123
        dkgB NONE
JCR18_RS19030 3945382 .. 3945399 + -12.7  -5.57054   AGACTAATAAAAAAA             GCGCCTG AGAT CAGGCGC              TTTTTTTAGCTTATT 100 34
JCR18_RS19045 3947533 .. 3947563 + -11.3  -5.05505   GAATCAGCGCAATAA       AAAGGCGGATATT TTATC AATATCCGCCTTC       TTTTTAATTTCTGAT 100 83
JCR18_RS19070 3954368 .. 3954396 +  -3.9  -4.61482   ACGGGTGCATGTCGA        CTTTTAAAGCGTT ATA AGCGATTTAAATG        TTATTTTTTAAGCAA  65 68
         ppc 3957208 .. 3957230 + -10.6   -4.8622   AACTACTTTCTTAAA           GCAGTGCATC TCG GATGTGCTGC           TTTTTACTTGCAAAA 100 53
JCR18_RS19080 3958786 .. 3958801 + -10.4  -5.27477   ACCTAAATTCTAAAA              GGCAGC GCAA GCTGCC               TTTTTTCATTCCGAT 100 35
JCR18_RS19085 3959915 .. 3959926 +  -3.6  -3.46602   TAGTCCAGTGTTATC                CCTG ACAT CGGG                 TTATGGTGTAAAAAC  50 194
         fmt 3965300 .. 3965313 +  -2.3  -2.62246   CACGTAGGACAGATT               CTGCC ATGA GTCAG                GTTACTTCAAATTCA  40 17
        rsmB 3966615 .. 3966631 + -10.1   -5.1675   GATTACATAAAAAAA              GCAGGCG TTA TGCCTGC              TTTTTTACTAGATCA 100 31
JCR18_RS19135 3970836 .. 3970852 +  -9.5   -5.4505   TCCCCATATAAAAAA              GAACTCT ATA AGAGTTC              TTTTTTATTCAACCA 100 62
JCR18_RS19175 3980252 .. 3980281 +  -3.1  -3.21695   ACTGATTCGACCTCA       TAACA-CATTTC CTGACCC GAAATGCTGTTA       TTAAATTGGTCATAA  46 64
JCR18_RS19180 3981203 .. 3981220 +    -7  -6.23545   CTTATAAATAAAAAA             CCTCTC ATCATA GAGAGG              TTTTTTTTATTTAAA 100 42
JCR18_RS19205 3987514 .. 3987547 +  -2.4  -5.42605   AAATTAAATACCTTG     GCCAGTACTCGTAT ATTTAA GTATCTGTACTGGC      TTTTATTTTTATTAG  72 34
JCR18_RS19210 3988346 .. 3988374 + -13.4  -4.10672   TTATATAGCTAAAAA        TAAAGGGAATGA ATCAA TCATTCCCTTTA        TTTGATTTAGATTAA 100 58
        dnaA 3993451 .. 3993461 -  -2.4  -3.60971   AGTTCAACTTCTAAA                 TCGG AAC CCGT                 AATAGTGAGCGCTTG  48 255
        dnaN NONE
        recF 3991329 .. 3991341 -  -3.4  -3.65529   ATAGGTTTATTCAAA                GATG GGTAA CATC                AAAAAATTATGGCGC  52 32
        gyrB NONE
        cybC 3988346 .. 3988374 - -13.4  -4.72846   TTATATAGCTAAAAA        TAAAGGGAATGA ATCAA TCATTCCCTTTA        TTTGATTTAGATTAA 100 48
JCR18_RS19200 3984143 .. 3984154 -  -2.2  -4.45201   TTTTAGAAAAAAATA                GAGC TTTT ACTC                 AAATATTTTTATCTC  57 184
JCR18_RS19195 3983013 .. 3983031 -  -8.9  -5.42514   TTAGAAAGCAAAAAA             GCCTAGA ATAAA TCTAGGC             TTTTAAGTTCAAAAT 100 44
JCR18_RS19190 3981623 .. 3981659 - -16.9  -5.79595   TTTCAAAATAAAAAA    GACCCTATATTGAGTAT AGC ATAATCAATATAGGGTC    TGTCTTCGAAGTTTA 100 69
        erpA 3981203 .. 3981220 -    -7  -5.72622   CTTATAAATAAAAAA             CCTCTC ATCATA GAGAGG              TTTTTTTTATTTAAA 100 48
JCR18_RS19170 3977755 .. 3977770 -    -9  -6.09196   TCTAAAATAAAAAAA              GCAGGA TTAC TCCTGC               TTTTCTATCACTACA 100 47
JCR18_RS19165 NONE
JCR18_RS19160 NONE
JCR18_RS19155 3975057 .. 3975108 -  -8.4  -3.99678   ACCGTGATAATGAAA TCACAGAAGTTAATAAACCAAGAT CTCA ATCTTTATTTACTAATTTCTGTAA TCCGAACTTATCTTA  79 46
JCR18_RS19150 3971768 .. 3971778 -  -5.4  -3.53761   GAAGCGTTTTCCAAA                 TCTG TAA CAGA                 CTGGGCTGAATTGAA  58 144
         rrf 3971557 .. 3971584 - -16.4   -5.7946   CCTGCAATAAAAAAA        CACCCCAACCTC TTTT GAGATTGGGGTG         TTTAGAATAATGAGC 100 38
JCR18_RS19140 3970836 .. 3970852 -  -9.5  -5.36441   TCCCCATATAAAAAA              GAACTCT ATA AGAGTTC              TTTTTTATTCAACCA 100 30
JCR18_RS19125 3967276 .. 3967292 -  -5.1  -3.54051   ACAAATTTCACAGAA              CCCTTAT CCT ATCAGGG              TTCTGCCTTCTTAAA  56 1
JCR18_RS19115 3966615 .. 3966631 -  -9.4  -5.74122   GATTACATAAAAAAA              GCAGGC GTTAT GCCTGC              TTTTTTACTAGATCA 100 46
        ilvD 3962093 .. 3962135 - -12.3  -5.43414   ACCAGACATAAAAAA TGCACCC-TTAACATGATAA CAAT TCATCGTGTTAATGGGTGCA TGTTTCCTACTCAAT 100 58
JCR18_RS19095 NONE
JCR18_RS19090 NONE
JCR18_RS19065 NONE
JCR18_RS19060 3949240 .. 3949264 -  -2.9  -2.97676   ATGCAGCGAAATAAT          CCTGTATTT TTTGTGT AAAGACAGG          TGCTACTATATTGGA  43 85
JCR18_RS19055 NONE
        dnaJ 3947536 .. 3947560 -   -13  -5.08601   TCAGCGCAATAAAAA          GGCGGATATT TTATC AATATCCGCC          TTCTTTTTAATTTCT 100 55
        dapB NONE
JCR18_RS19035 3945382 .. 3945399 - -12.7  -5.85737   AGACTAATAAAAAAA             GCGCCTG AGAT CAGGCGC              TTTTTTTAGCTTATT 100 40
JCR18_RS19020 3942144 .. 3942167 -  -8.9  -3.28857   TACAAAATGGAGCAA          CGCACTGAT GACGAG ACCAGTGCG           ATTTCTCATTATCAA  72 210
JCR18_RS19005 3940376 .. 3940403 -  -3.4   -3.5394   AAATTGCGCCTCAAA        TTGAGCTATTTC CAAT GTCACAGCTCAA         TGAAGCAATTGAACG  50 101
JCR18_RS18960 3934519 .. 3934555 -  -4.4   -4.8622   CGCTGTAATTAAAAA   TGCT-CATCGGGAGCGT ATTA ACGCACCCAACGCACCA    CATAATCTTCGATAT  70 6
JCR18_RS18955 NONE
JCR18_RS18950 3931867 .. 3931895 -  -9.8   -3.4247   AGAATTGGAACAATA       GCAGGAAACAATA AAAC TATTGTT-CCTGC        TGCCATCTGCGTTGT  80 13
        pncA NONE
JCR18_RS18915 3926062 .. 3926082 -  -7.6  -5.27335   TGCTTTAAATAAAAA            GACCAAAC TATCC GTTTGGCC            TTCTTTTCTAATGTA  91 58
JCR18_RS18910 3924370 .. 3924380 -  -5.4  -2.89683   ATCGTACTTTAGACA                 TTGC ACG GCAA                 ATACAAGCAACCTGT  52 235
        hppD 3922464 .. 3922501 - -14.5  -2.54098   GCCGCTAATCAATAG   CCATAAAAAACCAAGAGC ATT GCTCTTGGTTTTTT-TAG   ATTAGAGACAAAGCA 100 45
JCR18_RS18875 3917098 .. 3917115 -  -9.9  -6.04324   TTAAAAAATAAAAAA             GGACGTA TTTA TACGTCC              TCTTTAGCTTCTAAC 100 48
JCR18_RS18870 3916211 .. 3916225 -  -5.8  -3.93216   TCTAAACCACAATAA               TGTTAT GTT ATAACA               TAACTATTGATCAAG  64 95
JCR18_RS18865 3914858 .. 3914882 -  -5.7  -5.43621   ATAAATCATAAAAAA          TAAGCCCCT TGAAAAT AGGGGCTTT          TTTATTAAGCGATCA  86 30
        hutC 3912631 .. 3912647 -  -6.7  -3.14211   ATCGGCCCTGATCAA              TTTAATC ATG GATTAAA              TTTCCCTTCGAGATA  62 14
JCR18_RS18850 3912012 .. 3912038 - -10.3  -5.71712   TCTGACATAAAAAAA         GCACATATCTT CTAAC AAGACATGTGC         TTTTTAATCAGTAAA 100 51
        hutU NONE
        hutH NONE
JCR18_RS18835 3906999 .. 3907025 -   -16  -3.55563   AGCCTATCCTCGAAA         CTGCCCAACAGT AAA ACTATTGGGCAG         CTGATTTGTTAGCTT 100 34
JCR18_RS18830 NONE
        hutG 3904792 .. 3904816 -  -7.2  -5.89947   GAAAGTCAAAAAAAA         GCGCACATGAG CGAT CTCA-GTGCAC          TTTTTCATTTCTACA 100 55
JCR18_RS18820 3902725 .. 3902745 -    -9  -3.53444   CTATCGGTTTTTAAA            TCAGGCCC AACGA GGACCTGA            CCTAAATTTCGATTT  78 46
JCR18_RS18815 NONE
        murI 3901172 .. 3901200 -  -7.4  -3.19389   TAACTGATTTATTAA        GCCCGATATGCA TTAAT TGCCTATTGGGC        TTTTTATAGCTCTAC  66 29
        serB 3891533 .. 3891552 -   -10  -5.60993   TTCTGCATAAAAAAA            GCGCTACT CTTG AGCAGCGC             TTAATGATTGTTCAC 100 47
JCR18_RS18760 3890787 .. 3890803 -  -8.7  -5.63517   TTCGTAAATAAAAAA              GGCATGC TGT GCATACC              TTTTTACCGTTAGAT 100 51
JCR18_RS18755 3890058 .. 3890091 - -12.7  -3.01041   AAGTTGAAGCATAGA     TATAAAAAAACTCCC GATC GGGAGTTTTTTTTTA      GATCTTAACGACCAG 100 30
        pncB 3888142 .. 3888176 - -11.7  -2.86492   TTATATCTATCAAAC     TCTGATTTTATGCTA GTGTT TAGCAGAAAATCAGA     TATTAAAATTCTCAA  88 79
JCR18_RS18740 3887238 .. 3887248 -  -2.4  -2.54586   TGTAAAACTCAAGAC                 GGCG ATT CTCC                 AGTAATGATAGGACT  40 8
         psd 3886330 .. 3886351 -  -4.4  -6.02546   TTAAATCAAAAAAAA           CCCTGAAT AATTAA AGTCAGGG            TTTACTTGTTTTTAG  91 57
JCR18_RS18730 3884687 .. 3884722 -   -10  -5.11836   ATAGTTAAAATAAAA    TTAACTTGGTATTTAA TATT TTAAATACCAAGCTTA     GGTCATCCCAATTAT 100 37
JCR18_RS18725 3884121 .. 3884135 - -11.4  -5.04356   CTAAATAATTAAAAA               GGGAGC GCA GCTCCC               TTTTATTTTTAAAAT 100 74
JCR18_RS18715 3881877 .. 3881897 -    -9  -5.19879   CTTCAAATATAAAAA            GCCGACTC ATGAA AAGTCGGC            TTTTTTATAAGATTT  95 49
JCR18_RS18695 3877784 .. 3877799 -    -9  -5.63504   AACCTTATAAAAAAA              GCCATC AATT GATGGC               TTTTTTCTTTTAAAC 100 42
JCR18_RS18665 NONE
JCR18_RS18660 3870303 .. 3870320 -  -7.7  -5.68039   AAAGTTATAAAAAAA             GCCCAAC TTAA GTTGAGC              CTTTTTTAATTACTT 100 46
JCR18_RS18655 NONE
JCR18_RS18650 NONE
JCR18_RS18645 3864077 .. 3864094 - -11.3  -5.83822   GAGACGTAAAAAAAA             GCCCAAC TTAT GTTGGGC              TTTTTACACTAATTA 100 34
JCR18_RS18635 NONE
        parE 3859866 .. 3859885 -  -3.6  -3.88396   CGCCAAAGGAAAACA            TTTGTTCT TTAA AGAACAGA             ATAAGACAGCTTTTT  54 175
JCR18_RS18625 3858668 .. 3858719 -  -8.4  -4.85599   CCCATCCGATAAAAA TTACTGTCTAAATTAAAATAGACA AATC TGTCTATTTTAATTTAGTGATCAA AATGCCAATGGCCGC  90 88
        hpxO 3855775 .. 3855806 - -13.2  -3.24924   TTTTTATTTAGAAGA      TAAAACAGCAAGGA AAAC TCCTTGCTGTTTTT       GTTTTTAATCGAGTG 100 30
JCR18_RS18580 3851001 .. 3851012 -  -7.2  -5.64274   GTATTCATAAAAAAA                GCCC CGAA GGGC                 TTTTTAGTGTTTTTT 100 39
JCR18_RS18575 NONE
JCR18_RS18570 NONE
        dsbD 3847487 .. 3847506 -  -2.1  -5.37345   TTCAAGCAGAAAAAA            TTGCCGA ACGTTG CCGACAA             GCTTTACAAGAATTG  76 218
JCR18_RS18550 3844808 .. 3844823 - -10.4  -5.63504   AAGCGCATAAAAAAA              CGAGCC CAAT GGCTCG               TTTTTTATTTAAGCT 100 42
        pyrE 3842448 .. 3842473 - -11.3    -4.946   AGTAAATATTAAAAA         GGCATACC-CTA TTT TAGAGGTATGCC         TTTTTGTTTTTAGAT 100 35
        gshB 3838484 .. 3838495 -    -3  -5.15969   CTTCAACTCAAAAAA                CAAT GGAA ATTG                 TCATCTATTTTTGTA  71 227
        murG NONE
        murC NONE
JCR18_RS18505 NONE
JCR18_RS18500 3834053 .. 3834063 -  -6.8  -2.73875   TGTTGTCTAATACCA                 GGCA AAT TGCC                 TATTTTAAAGCCACG  59 43
        ftsA NONE
        ftsZ 3831376 .. 3831395 - -12.2  -6.20267   TCAAAAATAAAAAAA            GGCAGTGT TTAT ACACTGCC             TTTCAATAGATTGTA 100 48
JCR18_RS18485 3830401 .. 3830412 -  -4.4  -4.02911   GCCAAATAAAGACAA                TGAC TTAT GTCA                 CACTCACGTATGGAA  60 18
JCR18_RS18475 3828966 .. 3828979 -  -5.2  -6.04419   AAAATAACAAAAAAA               CGCC AATAAA GGCG                TTTTTTTATACAATC  95 113
        aceE NONE
JCR18_RS18465 3824073 .. 3824098 - -10.5  -4.43864   AAATAGACATTAAAA         CAAAACCCCGC CGAA GCGAGGTTTTA          GTATGTTCTTTCAAA  95 44
JCR18_RS18460 3823504 .. 3823514 -    -4  -3.40597   CCTGCTAGCCAAATA                 TCAT AAA ATGA                 TTGCAGAGTGGTAAA  51 207
JCR18_RS18455 3822818 .. 3822860 - -15.9  -3.16033   TAACTATTAAAATTA CCTATAAAAAAACGCACTC TTAAT GAGTGCGTTTTTATATAAG CTTAAAATCATTTAA 100 37
JCR18_RS18445 3819615 .. 3819642 -  -4.2   -3.0264   AAATTGGGCTCAATA        TGTCGAACATTA TTTT TTATGTTGGACA         GCTAAAAATTTGTTC  48 14
JCR18_RS18440 3819045 .. 3819065 -  -3.3  -2.90322   GGTCAGCATAACAAT           CTCACTGG TAAATT CC-GTGAG            CTATTATAAACAAAT  45 134
        guaB 3817519 .. 3817551 - -14.4  -4.80882   ACTTTACACCAAAAA     CAA-AAAGCCGTCAG TGTA CTGACGGCTTTCTTG      ATTGTTTTGGTTACC 100 46
        glmM NONE
        pdxH NONE
        recJ 3813694 .. 3813711 - -11.3  -5.90981   CTAGATTAAAAAAAA             TCCGCTC AATT GAGCGGA              TTTTTTTATTGATTT 100 31
        prfB 3811240 .. 3811255 -  -6.2  -2.72263   ACACGTCTTGTAAAC              GAACAA AGCT TTGTTC               AGCATTTCGGAAACA  57 187
JCR18_RS18405 NONE
JCR18_RS18400 3809722 .. 3809751 - -10.1  -6.06529   CATAGATAAAAAAAA       TGGCAGAGTTTCG ATAC CTAAACTCTACCA        TATACAAGAAAAGCC 100 102
JCR18_RS18395 NONE
JCR18_RS18390 3807613 .. 3807659 -  -4.6  -3.05935   ATATTCCTTACCCAA TTCAGGAATTAAAAATGGTA TCTAATC CACCAGCTTTAAACCCTGAA ACATCAGCTAAACAA  50 29
         acs 3803726 .. 3803770 - -11.8  -3.77484   TAGCAAAATTTTAAA CAGGTTTAATAAAAAAGCCCC TATC GGAGCTTTTTTATTAAAAC-G TTATTTTTGTCTATC 100 26
JCR18_RS18365 3802583 .. 3802594 -  -4.4  -2.71144   TACCTTTTGTAATTA                TCCT CTGA AGGA                 TAAATGAAAATTAAG  48 94
JCR18_RS18360 3800956 .. 3800982 - -15.2  -3.05384   CGTTTGGCGATGCAA         CTCGTGAAGCGG GTG CCGCTTCACCAG         AACAAGAAGGCAACT 100 396
JCR18_RS18345 3798292 .. 3798321 - -15.3  -3.10612   CCTAAGTGGAACATA       TAAAAAAGACCTC AATT GAGGTCTTTTTTA        TTTTAGATTTTTTTA 100 28
JCR18_RS18330 NONE
JCR18_RS18325 3791349 .. 3791360 -  -7.2  -6.04953   AGATAAATAAAAAAA                GCCC CGTA GGGC                 TTTTTTGAGATGTTC 100 55
JCR18_RS18320 3790395 .. 3790405 -  -6.8  -3.14708   TTAATGAAAATGACA                 GGCT TAA AGCC                 AATAAAGACATTCAG  62 148
        betT 3788365 .. 3788380 -    -9  -5.95166   TTGAATTAAAAAAAA              GGACTC AATT GAGTCC               TTTTTTTATGGCTAT 100 40
JCR18_RS18305 NONE
JCR18_RS18300 3782994 .. 3783009 -    -9  -4.36343   GAAGTAATCAAGAAA              GGAGTC TTAG GACTCC               TTTTTTTCGTTTATT  89 16
JCR18_RS18290 NONE
JCR18_RS18285 3778244 .. 3778263 - -10.8  -5.28755   AAAGATATGAAAAAA            GATCAGTC TCTC GACTGATC             TTTTAGTGTTTTACG 100 36
JCR18_RS18280 NONE
JCR18_RS18275 3777013 .. 3777029 -  -9.5   -4.7373   CGACTTTATGAAAAA              CTTTGGT GTC ACCAAAG              AAGAATTTAAAAATA  93 458
JCR18_RS18265 3775343 .. 3775365 - -10.7  -5.00616   TTTGGGCTTAAAAAA           TAAAGAGGC GTTTA GCCTCTTTA           GTTTATCGAAGTTTG 100 53
JCR18_RS18260 NONE
         ssb 3773217 .. 3773233 -  -9.4  -5.64873   TTGAATAATAAAAAA              GGCGAG ATAAA CTCGCC              TTTTTCGAAACTTTG 100 42
JCR18_RS18240 NONE
JCR18_RS18235 3769794 .. 3769812 - -13.2  -5.59962   TAAAACAAACAAAAA             GAGCCTCA CAG TGAGGCTC             TTTTTTATTTAAAAA 100 42
        gabT NONE
JCR18_RS18220 3765275 .. 3765298 - -12.5  -5.96894   ACTTAAATAAAAAAA          CCGGTCATG AATGGG CATGACCGG           TTTTTTTGTGAAACA 100 98
JCR18_RS18205 3762421 .. 3762447 - -11.7  -4.70659   CTTTACAGCGAAAAA        GCCCGCTATTCA CACT TGA-TAGCGGGC         TTTTTATTACTTTGC 100 72
JCR18_RS18200 NONE
JCR18_RS18195 NONE
JCR18_RS18190 3758960 .. 3759004 - -14.8  -3.64283   GAAATTCGTTAATAA GAAAT--GAAAAAAGCCCAACA TCC TGTTGGGCTTTTTTCGTATTTC GTTACTAGGCATACA 100 514
JCR18_RS18175 3756212 .. 3756223 -  -2.2  -2.62316   CAAAGGTACAAGTGA                CCGA GCTT TCAG                 AACCTATTTTTGCAG  40 150
JCR18_RS18165 NONE
JCR18_RS18160 3754048 .. 3754066 - -10.3  -5.66684   CAACCCATAAAAAAA             GTCCGAC TCAGT GTCGGAC             TTTTTTATTTAGTCT 100 34
JCR18_RS18145 3750308 .. 3750325 -  -3.3    -3.889   TTTAATTACACTAAA             GCCCAAC TCCC GTCGGCC              CCCCCCATCAAACCC  54 33
JCR18_RS18140 3749511 .. 3749534 -  -8.2  -3.53091   ACTTTCCTTTTTAAA          GACCTAAAAC TAGA GATTTAGGTC           TTTCCATTCTCAAAT  73 72
JCR18_RS18135 NONE
JCR18_RS18130 3748161 .. 3748185 -  -5.8  -4.24963   TAGAATTATTTAAAA          GGCTTAAATT TAAGT AAATTAAGCC          TTTTTATTATTTTAA  69 47
JCR18_RS18115 3746848 .. 3746871 -  -3.1  -3.91084   TTATTTGTAAGGAAA          GACCCAAAC CCTCAC GCTTAGGCC           TTTCTATCTTTAAAT  52 41
JCR18_RS18110 NONE
JCR18_RS18105 3745248 .. 3745271 -  -4.7   -5.1925   CCAGAATTCAAAAAA          GACCT-AATC GTTTT GATTTAGGTC          TTTTTTATTGGCTAA  79 58
JCR18_RS18095 3743112 .. 3743129 -  -9.9  -5.64274   CGAGCCATAAAAAAA             CCAAGAC ATAT GTCTTGG              TTTTTTTATTACATC 100 46
JCR18_RS18085 3741246 .. 3741273 - -12.2  -3.69068   TTATTCGAATAAACA        GATGAACAGACA GATC TGTCTATTCATC         TTATTGTATCGATTC  95 68
JCR18_RS18080 NONE
JCR18_RS18075 3740282 .. 3740299 -  -9.8  -3.42283   TAACGCAGTGAAACA             GGCGGC CTCCGT GCCGCC              GTCGCGATAGCAAAT  80 58
JCR18_RS18060 3737555 .. 3737569 - -11.4  -3.71873   TTATTTATATTTAAA               GGGGCA AGA TGCCCC               TTTAATTTTTTATGC  93 35
JCR18_RS18050 NONE
JCR18_RS18045 NONE
JCR18_RS18040 NONE
JCR18_RS18035 3734302 .. 3734332 - -14.3  -3.34431   AAAAGAGTCCGAGAA       TAAAAAAGAGAGC TTAAC GCTCTCTTTTTTA       TATATCACTTTTCTT 100 23
JCR18_RS18025 3732703 .. 3732718 -    -9   -5.1615   TTAAGATGTAAAAAA              GAGCCT GATT AGGCTC               TTTTTTATTGCTGAT  95 59
JCR18_RS17995 NONE
JCR18_RS17990 3728515 .. 3728533 - -11.8  -5.83822   TATACTCAAAAAAAA             TCCCTGAT GGG ATCAGGGA             TTGAAAACACAAATA 100 42
JCR18_RS17985 3728314 .. 3728336 - -16.4  -5.17353   ATAGGCATGAAAAAA           GCCCCATACT TTA AGTATGGGGC           TTTTTCGAATATGGT 100 37
JCR18_RS17955 3720624 .. 3720641 -  -9.1  -5.74288   AGAAACAATAAAAAA             GCCTCCC GTTT AGGAGGC              TTTTTTAAGTTCTCT 100 49
JCR18_RS17950 3718137 .. 3718154 -  -9.1  -5.67283   AACTTAAATAAAAAA             GCGCCTC ATGA AAGGCGC              TTTTTTATTTGATTC 100 44
        ettA 3713669 .. 3713684 - -10.4   -5.4505   CCTTCTAACAAAAAA              CCAGCC CTTA GGCTGG               TTTTTAAATTTAGCA 100 45
JCR18_RS17920 NONE
JCR18_RS17915 NONE
JCR18_RS17910 3710796 .. 3710814 -    -6  -2.99161   CAATTCAGGACAAAT             CTTCTGAG TCT CTAAGAAG             CATGCGGATATACTT  57 52
JCR18_RS17905 3710488 .. 3710506 -  -4.7  -3.84825   TTTACTCATAGGAAA             CTAATTA TTAAG TAATTAG             TTTCCTACAAAAAAA  60 42
JCR18_RS17900 NONE
JCR18_RS17895 NONE
JCR18_RS17890 NONE
JCR18_RS17885 3704019 .. 3704040 -  -5.9  -4.18494   TATGGTGAGTTAAAA           GTAACGATG AAGA CATCTTTAC            CTTTAACTCTTACAA  69 95
JCR18_RS17880 3703010 .. 3703036 - -13.9  -3.12955   AAATTTAAAACTATA         TTCACATCAGC TTAAT GCTGATGTGAA         TGCGTCTTGTCATTA 100 10
JCR18_RS17870 3701410 .. 3701426 -  -5.1  -5.60689   CTAGACAATAAAAAA              GCTGATC ATA AACCAGC              TTCCCATCATACTTA  85 42
JCR18_RS17825 3694845 .. 3694872 -  -2.6  -5.85244   AAGCAAAACAAAAAA        GCAAGCTCACCT TTTC AGGCTCACTTGC         TTCACTATAAAAAAG  79 80
        rsmH NONE
        ftsL NONE
        ftsI NONE
JCR18_RS17805 NONE
        murF NONE
JCR18_RS17795 3687534 .. 3687549 -    -9   -5.7946   TCTCCAATAAAAAAA              GCCAGT AGAA ACTGGC               TTTATATTGACACCA 100 50
JCR18_RS17790 NONE
JCR18_RS17785 3686340 .. 3686369 - -15.3  -5.16151   CAAATTGAATAAAAA       TAAAAAAGCCATC GTTA GATGGCTTTTTTA        TTACGCTTTTGAAAA 100 10
JCR18_RS17775 3682547 .. 3682563 -  -2.3    -3.794   CGCCAAGGCAGTAAA              TTAATTG TTG CCATTAA              TCAAAACTCCTTAAA  50 22
JCR18_RS17770 NONE
JCR18_RS17765 NONE
JCR18_RS17760 NONE
JCR18_RS17755 NONE
        aroK 3677789 .. 3677805 -  -3.7  -3.17075   GTTCGCCTAATTCAA              CATGTAA AGT TTGCATG              AATTTATAAAACCAC  46 53
        aroB NONE
JCR18_RS17740 3675749 .. 3675775 -  -5.2  -5.06451   TATCATGTGAAAAAA         TGACTAAATATG CAC CACATCTGGTCA         AAAAATATTAATACG  76 81
        gltB NONE
JCR18_RS17730 3669351 .. 3669375 - -13.7  -5.81032   TAATGGTAAAAAAAA          TAAAGCCTGCA TAT CGCAGGCTTTA          TCAAAAACTTTAATA 100 54
JCR18_RS17725 3668316 .. 3668333 -  -9.9  -5.51402   ATAGATTTAAAAAAA             CCGGATT TTTA AATCCGG              TTTTTTATTAGCTTG 100 33
JCR18_RS17720 3667625 .. 3667639 -  -7.2  -2.72324   TTGATTTAAATTAAT               CAAAAG AAA CTTTTG               GAGCCTGCTGAGCAG  62 6
JCR18_RS17715 NONE
JCR18_RS17710 3665772 .. 3665786 -  -7.2  -2.61199   TAAGCTGTAATTAAC               TGACAA AAA TTGTCA               CTAGGAATTTAGTAG  62 201
JCR18_RS17705 3665151 .. 3665168 -  -7.7   -5.4505   TTCTTCAATAAAAAA             GAGAGGC CGCA ACCTCTC              TTTTTATTAATTAAC 100 43
JCR18_RS17700 3663805 .. 3663821 -  -2.3  -2.94137   AAGGACTTGATAAAG              TTTACTT CAA AAGTTAA              GGAATTTTTGAAGCT  41 22
JCR18_RS17695 3662056 .. 3662075 - -12.2  -5.60993   TTTCTCATAAAAAAA            TCCCCTTG TATT CAAGGGGA             TTTTTTTTATTTATC 100 32
        ispH 3655989 .. 3656017 - -10.5  -5.63504   AAGGGTATAAAAAAA        CAGATAACTGTCA TGT TAACAATTATCTG        TTTAACTATTTAAAA 100 65
JCR18_RS17650 NONE
        pilV 3654848 .. 3654876 -  -4.6  -4.59342   TTTATTAGAAATAAA        TGATTGAGCCAT TTAAT ATGCCTCCATCA        TTAAGCAAGTTGAAT  68 9
JCR18_RS17640 NONE
JCR18_RS17635 NONE
JCR18_RS17630 3649156 .. 3649167 -    -3  -2.78526   CCGTAGAATAGAGTA                CTTA TTCA TAAG                 CTGTTCCTTCTAGCG  42 35
JCR18_RS17625 NONE
JCR18_RS17620 3648174 .. 3648188 -  -3.5  -3.66803   CGGCAACACTTCAAA               CCCCT TTCAT AGAGG               GCGACATTCTACGTG  52 97
        rpsP NONE
        rimM 3647292 .. 3647302 -    -4  -3.51948   TAATCCTATAAAAAG                 GATT AAT AATC                 TACGCCCCAATTGAC  51 17
        trmD NONE
        rplS 3645896 .. 3645911 - -10.4  -6.09196   TTTAAAACAAAAAAA              TGCGCC AAAA GGCGCA               TTTTTTACTCGCTAT 100 45
        truB NONE
JCR18_RS17580 3641886 .. 3641926 - -14.3  -3.05769   GCTTTAAATGATACA  CAAAAGTATGAACCACTCC TCA GGAACAGTTCATACTTTTA  TCTTATTTAACCTGT 100 32
JCR18_RS17575 NONE
JCR18_RS17555 3636243 .. 3636266 -  -9.6  -5.45813   CACCAAAAAACAAAA          GGCATAGCTT TATG ATGCTATGCC           TTTGTCGGTTACTCT 100 75
JCR18_RS17550 3635825 .. 3635842 -  -8.5  -6.08342   TAAGAAATAAAAAAA             GACGATA TATT TATCGTC              TTTTTTATGCTTAAG 100 36
JCR18_RS17535 3634072 .. 3634091 -  -4.4  -3.31263   AGTGCATGTTTAGAA            TGTGAA-AC ACC GTATTCACA            AGGTGTCTAAAACGA  52 236
JCR18_RS17530 3632676 .. 3632697 - -11.7  -5.66338   AAATAGAATAAAAAA           TACCGGAAT ATAA ATTCCGGTA            TTTTTTTAATGTAAG 100 31
JCR18_RS17505 3627115 .. 3627125 -    -4  -3.54146   GTGCCTAATTAAATA                 GATT ATT AATC                 TTCAAAATCTATTCT  51 20
JCR18_RS17500 3626389 .. 3626407 - -11.8  -5.10461   TGCATGCAATAAAAA             GCCTTCTT ATA AAGAAGGC             TTTTTTAATTTAAAT 100 35
JCR18_RS17485 3623571 .. 3623600 - -15.3  -5.26875   TTTTTAAGCAAAAAA       TAAAGCTCAAATC TCAA GATTTGAGCTTTA        TTTAATCGAGGAAAT 100 44
JCR18_RS17480 3621725 .. 3621740 -  -8.2  -5.14563   GCGCCCATGAAAAAA              GGCCCC ATAA GGAGCC               TTCAATCAACACAAC  93 57
JCR18_RS17475 3619462 .. 3619494 -  -6.4  -4.08216   CCACCTTTCCTAAAA     GGTAGTTTCCTCAGA TTAG CCTG-GGAAAATACC      GCGTTCTTTACGAGC  68 8
JCR18_RS17470 3618130 .. 3618140 -    -4  -3.07816   TTTTTATTTAGCCAA                 CTTT GCC AAAG                 CTCTTTTTAAACGAG  48 3
        astA NONE
        astD NONE
        astB NONE
        astE 3613193 .. 3613240 - -14.7  -2.67613   TACTAACTAATTAAG TTAG-C-AATAAAAAAAGGGCGA TTCA TCGCCCTTTTTTTATTTGTCTAA AATTAATTATTCAGA 100 36
JCR18_RS17440 NONE
JCR18_RS17435 3610054 .. 3610083 - -13.7  -5.60993   TTTTTCATAAAAAAA       CTCGTTGCAGAAG TTAT CTTTTGCAACGAG        CCATAGCCATTTAAA 100 76
JCR18_RS17415 NONE
JCR18_RS17410 3606708 .. 3606734 - -12.5  -3.79251   TAGCTTATTATGAAA         TAAAGGGATCT TTTAT AGATCCCTTTA         TTTTTTGAGTTAAAC 100 35
JCR18_RS17390 3602642 .. 3602654 -  -3.3  -3.68619   TTTAATCCAGTGAAA                TACGC TCA GCGTC                ATGAGGTGACGTTTA  52 53
JCR18_RS17385 NONE
JCR18_RS17380 3600412 .. 3600429 -  -3.3  -2.61264   GCCGTTATTTATAAC             GGGCAAA AGTA TACGCCC              AAAGCCACATAAAGT  44 106
JCR18_RS17375 3599160 .. 3599173 -  -3.1  -3.63276   CCAGAACAAGTACAA               GGTTA TCAA CAACC                TGTTCGCACTGTACG  52 129
JCR18_RS17365 3597991 .. 3598041 - -13.7  -2.93435   CTAATGATGTATAGA CTCTAAAATCAAAAAGAGCGCAAT TGAT ATTGCGCTCTTTTTGATTTT-GCT AAAATTGACTTTACT 100 36
JCR18_RS17355 3593559 .. 3593578 - -10.8  -5.42514   CTATAAACCAAAAAA            GAACCTAC ATAT GTAGGTTC             TTTTTTATCTTACTT 100 42
         dxs 3588632 .. 3588659 - -12.2  -4.50943   GAATAATGCATAAAA        GCGTATCCATTT TAGC AAATGAATACGC         TTTTTGGGAAAAAAT 100 65
JCR18_RS17330 3587697 .. 3587726 - -11.6  -4.77438   ACCGACCATTAAAAA       GTAAAACCCTCT ATAAAA AGAGGGTCTTAC        TCAGAAATAATTTTT 100 45
JCR18_RS17325 3585475 .. 3585494 -  -9.3  -6.04324   CTAAAAAATAAAAAA            GGCCAGT ATGTAA ACTGGCC             TTTTTTTAAATCTCT 100 47
JCR18_RS17320 3585198 .. 3585223 -  -3.3  -4.73108   TTGACAAAAGCAAAA         CAAGCTAATAT AGGA ATATGAGCTAG          ATTTTGAAAAGAAAT  63 41
JCR18_RS17315 NONE
        mlaE NONE
JCR18_RS17305 NONE
JCR18_RS17300 NONE
JCR18_RS17295 3581839 .. 3581856 -  -9.9  -5.36441   TTTGTATATAAAAAA             GCACCTA AATT TAGGTGC              TTTTTTATCTTTGCT 100 43
JCR18_RS17285 NONE
JCR18_RS17280 3579490 .. 3579503 -  -3.7  -5.10461   CTCACTCAAGAAAAA               CGGCG TTAT CGTCG                TGTACTGATTATTGA  74 158
JCR18_RS17265 3576111 .. 3576121 -  -2.6  -2.78679   TGTTGTTATTTAAAG                 TTTA GTC TAAA                 TTTTAATTTGTACCA  40 28
       adeT2 3575030 .. 3575055 - -13.5  -4.18197   AGTCTTCATGCAAAA         TAAAAGGCAAC TTAA GTTGCCTTTTA          TTTTATCTACTCATT 100 28
JCR18_RS17250 3571268 .. 3571285 -  -9.9  -5.95286   ATTAAAAATAAAAAA             GCCATCT TTTC AGATGGC              TCATCGTTATTTATT 100 36
JCR18_RS17245 3569891 .. 3569908 -  -9.9  -5.79595   GCTTAAAATAAAAAA             GCAGGAT ATAA ATCCTGC              TTTTTTATTTAGAGA 100 41
JCR18_RS17210 3562680 .. 3562706 -    -6  -2.54193   CACGACTGTAATGCA         CATTTACTAC TTTCTTC GCAGTAAATG         CCCTCTTCTTGAGGG  54 131
        rpsJ 3562213 .. 3562242 -  -5.2   -3.6318   AAACCTCTAAAAAAG       CGGCCTAATTAAC TAATC GTTAATTA-ACCG       AAAGCCTTAACCCAA  59 32
        rplC NONE
        rplD NONE
        rplW NONE
        rplB NONE
        rpsS NONE
        rplV NONE
        rpsC NONE
        rplP NONE
        rpmC NONE
        rpsQ 3557461 .. 3557518 -  -6.6  -2.75577   CTACTCCAAAACCGA GCATCACCGGTCACAATTTCGAAAGGCTC AAA GAGTACT-CGAAATTG--ACCGATGATGC AACAAGAACGTCGAA  59 41
        rplN NONE
        rplX NONE
        rplE NONE
        rpsN NONE
        rpsH NONE
        rplF NONE
        rplR NONE
        rpsE NONE
        rpmD NONE
        rplO NONE
        secY NONE
        rpmJ 3551859 .. 3551885 - -14.4  -3.52717   AGTAGAGATAATCAA         CCGCCCCACAAA AAT CTTGAGGGGCGG         ATATTAACCCAATTC 100 71
        rpsM NONE
        rpsK NONE
        rpsD NONE
        rpoA 3549362 .. 3549386 -  -4.3  -2.64794   CCTAATTTCACACCA          CTATTACGATG ACG CATGGTGATAG          TCCTACTTAATTAAC  48 36
        rplQ 3548964 .. 3548982 - -11.7  -5.79595   TTGGAAAATAAAAAA             GACCGGC ATAAA GCCGGTC             TTTTTTGAATAATAT 100 44
JCR18_RS17065 3547296 .. 3547312 - -12.3  -4.91109   TCTTTACTATAAAAA              GGAGGCT TAT AGCCTCC              TTTTTATTTTCGAAT 100 42
JCR18_RS17055 NONE
JCR18_RS17050 3544825 .. 3544835 -  -5.4  -3.72141   ACATCCACATTGAAA                 TCTC CAT GAGA                 GACCTCCTTACTACG  59 457
JCR18_RS17045 3543355 .. 3543394 - -11.6  -2.90615   ACTCCTTTTAAACCA  GGCTCCTTACGATTACTA GAGT TAGTAACCGTAAGGAGTG   AGTTCCTTCAGATCT  86 43
        rrtA 3542699 .. 3542709 -    -4  -3.84961   TATTCAACGATCAAA                 TTTG CAT CAAA                 CTTTATCAATAAAGA  56 84
JCR18_RS17035 3540341 .. 3540359 -  -9.6  -5.74122   TACCACATAAAAAAA             CACCCTCT TAA AGAGAGTG             TTTTTGCTCGGCTTA 100 51
JCR18_RS17010 3534599 .. 3534611 -  -3.3  -2.87463   AATGGCGGTGAGAGA                GGGAT TCG AACCC                TCGATACCAGTAATA  45 0
JCR18_RS17005 NONE
JCR18_RS17000 3534354 .. 3534368 -  -7.1  -5.76633   GCAGATACAAAAAAA               CCGCT ATAAA AGCGG               TTAATTCTTCAAGTT 100 40
JCR18_RS16995 3533633 .. 3533659 - -13.9  -4.14257   TTTAATAATTACAAA         GAAAGCCACTT TATAT AAGTGGCTTTC         TTTTTTAATATATTT 100 48
JCR18_RS16985 3530442 .. 3530457 -    -9  -5.64274   TTAGGCACAAAAAAA              CCGCTA TATC TAGCGG               TTAATTCTTCAAGTG 100 39
JCR18_RS16975 NONE
JCR18_RS16970 3528202 .. 3528226 -    -8  -5.89921   AGTATAATAAAAAAA          CCCTATTATC CGGTT AATAATAGGG          TTTAAAGTTTAATAA 100 52
JCR18_RS16960 3526354 .. 3526386 -  -4.1  -3.95817   TAATACTCAACTAAA     GTCAGGGCTTAGCT GCTGTT AGCTTTGCCCTG-C      TTTAGACTCATGATG  56 1
        wrbA 3524172 .. 3524201 - -16.7   -3.7229   ATAAAATAGTTTAAA       TAAAAAAGAGCGG AAAC CCGCTCTTTTTTA        TTGCCATAAATTTAA 100 37
JCR18_RS16930 3520821 .. 3520846 -  -6.9   -4.6644   AATACATTTTAAAAA         TGTGGATATCC TAAA AGTTATCCACA          TTTTTTCATTAATGA  79 34
JCR18_RS16910 3515443 .. 3515458 -  -3.3  -4.42238   TTATGCCAATTAAAA              GAATG TTCCAT CATTC               ATCATCTAAAACTAA  61 37
JCR18_RS16905 NONE
JCR18_RS16900 3513509 .. 3513527 -  -6.7   -5.4251   TTCACATATAAAAAA             GCACCCT ACAAG AGAGTGC             TTTCCAACTCATCAA  93 50
JCR18_RS16895 3513100 .. 3513143 - -15.6  -2.57721   GAACTCACTAACTTA TGAATGAAAAAGGCCTGTTA ACTA TAACAGGCCTTTTTCATTTG TTATTTTTTCACACT 100 26
JCR18_RS16880 NONE
        pssA NONE
JCR18_RS16870 3508527 .. 3508542 -  -4.6  -2.75993   TTATTTATAGACAAG              GTGCCA ATTC TGGCTC               ATCAATTACTGACTT  48 442
JCR18_RS16865 NONE
JCR18_RS16860 NONE
JCR18_RS16855 3506621 .. 3506672 -  -8.4  -3.99678   ACCGTGATAATGAAA TCACAGAAGTTAATAAACCAAGAT CTCA ATCTTTATTTACTAATTTCTGTAA TCCGAACTTATCTTA  79 46
JCR18_RS16850 3503332 .. 3503342 -  -5.4  -3.53761   GAAGCGTTTTCCAAA                 TCTG TAA CAGA                 CTGGGCTGAATTGAA  58 144
         rrf 3503121 .. 3503148 - -16.4  -5.60993   CTTGCTATAAAAAAA        CACCCCAACCTC TTTT GAGATTGGGGTG         TTTAGAATAATGAGC 100 38
JCR18_RS16840 NONE
JCR18_RS16835 NONE
JCR18_RS16830 3500531 .. 3500548 -  -6.3  -5.63517   CTTTGAAATAAAAAA             GGTGG-CT CAA AGTCCACC             TTATAAGAATTAATA  93 35
JCR18_RS16820 NONE
JCR18_RS16815 NONE
JCR18_RS16810 NONE
JCR18_RS16805 NONE
JCR18_RS16800 NONE
JCR18_RS16795 3491321 .. 3491336 -    -9   -3.9941   TTTTTTATAATTAAA              GGGAAC GTAT GTTCCC               TTTTTTGATTTAAAT  85 94
        pdxA 3487369 .. 3487383 -  -3.6  -3.39896   TTGATACATAGAACA               TTTCCA ACA TGAAAA               ATTTAACTCGCTGCC  50 28
        rsmA NONE
JCR18_RS16755 3485681 .. 3485708 - -11.4   -4.6856   TAAATATCTTAAAAA        TAAAAAAGCCGC TTCA GCGGCTTTTTTT         ATTACATAACAGGAT 100 27
JCR18_RS16730 3481645 .. 3481674 -  -9.3  -4.10453   GAAATGGTGGCAAAA       GGCAGGCATGAAA CTAC TATCATGGCTGCC        ACTCGAAGGTTTTAT  85 45
JCR18_RS16720 3478922 .. 3478941 -  -7.9  -5.31275   TTCCATTATAAAAAA            GCCAATC CTTTGT GATTGGC             TTTTTTATTTTATAC  91 35
JCR18_RS16700 NONE
JCR18_RS16695 NONE
JCR18_RS16690 3474259 .. 3474310 -  -8.4  -3.99678   ACCGTGATAATGAAA TCACAGAAGTTAATAAACCAAGAT CTTA ATCTTTATTTACTAATTTCTGTAA TCCGAACTTATCTTA  79 46
JCR18_RS16685 3470969 .. 3470979 -  -5.4  -3.53761   GAAGCGTTTTCCAAA                 TCTG TAA CAGA                 CTGGGCTGAATTGAA  58 144
         rrf 3470758 .. 3470785 - -16.4  -5.81412   TTTACCCAAAAAAAA        CACCCCAACCTC TTTT GAGATTGGGGTG         TTTAGAATAATGAGC 100 38
JCR18_RS16670 3467571 .. 3467592 - -10.2  -5.48303   ACAACTCTAAAAAAA           GAAGCAGC TCAAAG GCTGCTTC            TTTTTATATTAATTA 100 34
JCR18_RS16660 NONE
        trxC NONE
JCR18_RS16650 3464995 .. 3465036 - -13.3  -4.70117   AACGTAAGAAATAAA GATATAAAAAAGCCCAAAT TCAA ATTTGGGCTTTTTTATTAC  GATTCTTGAGAGGCA 100 22
JCR18_RS16635 3463550 .. 3463563 -  -8.1   -5.4505   GGTCCCAATAAAAAA               GCACC CGAA GGTGC                TTTTTTTATGCGCCC 100 31
JCR18_RS16610 3459171 .. 3459182 -    -3   -3.6502   CATTTGGCACGCAAA                GTAA TGAT TTAC                 CTTTAGATGCAATGG  50 134
       coaBC 3456199 .. 3456215 -  -9.4  -5.69473   GAGACTATAAAAAAA              CCGCGA TTTAT TCGCGG              TTTTTTTATTTGGTT 100 47
JCR18_RS16555 3448312 .. 3448334 - -12.8  -5.49234   ATATCCAACAAAAAA           CCCCTAAACC GTC AGTTTAGGGG           TTTTCGTAGAATCAT 100 55
JCR18_RS16550 NONE
        glnE 3443717 .. 3443728 -  -4.4  -2.66748   GATCAGCCAAATTCA                TGGA ACAC TCCA                 AATTGTTATAAAATC  48 39
JCR18_RS16540 3442745 .. 3442775 -  -9.2  -4.74103   TCCCTAACCCAAAAA       TAAAAAGGCGAA ACCAACG TTCGCCTTTTCA       TGTTAACGGATTAAC  93 41
JCR18_RS16535 3441825 .. 3441835 -  -2.6  -4.19817   TTTATTTACTCAAAA                 TAAA AAA TTTA                 ATTTTTCGCTAAAAG  55 23
JCR18_RS16530 NONE
JCR18_RS16525 NONE
JCR18_RS16520 NONE
JCR18_RS16515 3438111 .. 3438121 -    -4  -3.67413   CTTATGAAGAAAAAT                 TACT AGA AGTA                 GTTTTACCAGACTGG  54 127
JCR18_RS16505 NONE
JCR18_RS16500 3435500 .. 3435523 -  -6.8  -4.19735   GGTCTTAAAAGGAAA          TGCGGATA AAAATTAA TATCCGCA           TCTGACCTAACATTT  74 55
JCR18_RS16490 3434032 .. 3434047 - -10.4   -5.4505   CTCTTTAATAAAAAA              CCCTGC AATT GCAGGG               TTTTTTATTAAGAAA 100 44
JCR18_RS16475 3429039 .. 3429067 - -11.2  -5.30686   AATACGCATAAAAAA        GACCTAACTTGA TAGTT TCAAATTAGGTC        TTTTGGCTTGATTTT 100 66
JCR18_RS16470 3427470 .. 3427516 -  -3.8  -4.97402   CAAAAGTGACAAAAA CCTTTGTTTCACTGATGTTGC TTCCCT GCAACA-CAGTGAAACGGCGA CATTCATGTCGGCAA  70 78
JCR18_RS16460 3426347 .. 3426363 -  -5.1  -5.60993   GTTGGCATAAAAAAA              TGGCC TCAAGCG GGCCA              TTTTTTTATTTTACG  85 42
JCR18_RS16445 3423933 .. 3423950 - -11.3  -4.84017   AATTTTTTATAAAAA             CGCCTGA ATAA TCAGGCG              TTTTTTATTTCTAAT 100 61
        baeS NONE
JCR18_RS16420 3416500 .. 3416512 -  -3.3  -5.00616   GGTTGTGTCAAAAAA                TGGGG CTT CCTCA                TTTTCATAAAGACAG  70 510
JCR18_RS16405 3413448 .. 3413463 -    -9  -5.56264   TTTAAATATAAAAAA              GGTGGT ATTG ACCACC               TTTTATTTTTTCTCG 100 28
JCR18_RS16385 NONE
        trpB NONE
JCR18_RS16375 NONE
JCR18_RS16370 3405778 .. 3405808 -    -4  -4.78572   TTTGAACTAACAAAA       CGTTCACCACAATA TAA TATTGCCATGACCG       CTGCCGCTGAACATT  69 525
JCR18_RS16360 NONE
JCR18_RS16355 NONE
JCR18_RS16350 NONE
        folC NONE
JCR18_RS16340 3399918 .. 3399944 - -14.6   -4.4267   CCTGAAAATGTAAAA         TGGATTCAACAG CAA CTGTCGAATCCA         TCTTAATTAGATTTC 100 50
        secA 3394493 .. 3394510 -  -9.9   -6.0458   ACAAACGAAAAAAAA             GCAGAAC AAAC GTTCTGC              TTTTTTTTATAACAC 100 44
JCR18_RS16315 3393918 .. 3393938 -  -7.6  -5.36441   CCCTGATATAAAAAA           GCCGGTTCA AAAT TGA-CCGGC            TTTTTTATATAGAAC 100 41
JCR18_RS16295 3390011 .. 3390038 -   -10  -3.81428   ATGAAGTAATTCAAA        GTTGAGATTTCT AAAA AGGAATCTCAAC         TTAACGCTAAAGTCA  87 21
JCR18_RS16265 NONE
JCR18_RS16260 3381429 .. 3381440 -  -5.8  -3.29511   TTTAGCCCTCGACAA                TCCG TTTT CGGA                 ATAATTACTTAGAAT  59 34
JCR18_RS16255 3378834 .. 3378851 -  -9.1  -5.72616   ATTGACATAAAAAAA             GCCCAGA TAAA TCCGGGC              TTTTTTGATAGCAAA 100 44
JCR18_RS16250 3377064 .. 3377075 -  -2.2  -3.16191   GTAGAGCTGTATTAA                GCAT ATGC ACGC                 TCCTTAAATGGTTGA  42 10
JCR18_RS16245 3376545 .. 3376562 -  -9.9  -5.64274   TTATTTATAAAAAAA             GCTGAAC CTGA GTTCAGC              CTTTTCACTTAGAAG 100 45
JCR18_RS16240 3376105 .. 3376150 -  -2.7  -3.74345   AGTTAGATACTTAAA TCTTTAGCCCTTATAGAGA TCTCAGTG TTTCTATAAGGGCTTTAAA CATCGATATTAGAGT  48 21
JCR18_RS16220 3372240 .. 3372257 - -11.3  -5.61596   ATCGCCATAAAAAAA             GCGACTC TAAC GAGTCGC              TTTTTTACTGTTCAA 100 50
        typA 3364539 .. 3364558 - -10.8   -5.5604   GTAAGCAATAAAAAA            CCGCTAAA CGAA TTTAGCGG             TTTTTCTTTTTCATT 100 50
        mscL 3363848 .. 3363878 - -14.3  -3.09681   TAAAATGCTATGTAA       TAAAAAACGGTAC ACTAG GTACCGTTTTTTA       TACTTAAATACTTTT 100 43
JCR18_RS16180 3363335 .. 3363345 -  -6.8  -4.41895   AAGGTCCAATCAAAA                 GCCA GTT TGGC                 TATCATCTCTTAGAA  76 81
JCR18_RS16165 NONE
JCR18_RS16160 3360699 .. 3360722 -  -3.2  -3.41024   TTGTTTAAGATAAGA          TATAACTCAT TGAG ATGTGTCATA           GTATTCGTCGTTAGA  48 71
JCR18_RS16155 3359370 .. 3359383 -  -5.3  -3.56092   TGACGATTGCCTAAA               TATGC CATG GCATA                GAGTTCATTTTTGTC  58 273
JCR18_RS16145 3357011 .. 3357032 - -13.1  -5.09259   CATTTCAAAAGAAAA           CGGGCAAAT CTTA ATTTGCCCG            AATATTAAAAACTAA 100 37
JCR18_RS16140 3356035 .. 3356048 -  -9.5  -3.46611   AGTAAAGAGACAATA               GCCCC TCAT GGGGC                TTTTCTTTTACCACC  80 33
JCR18_RS16120 3352719 .. 3352737 -  -7.5  -6.04324   TTAAAAAATAAAAAA             TGAGTAG TTTTT CTACTCA             CTTTTTACTTAAGTC 100 58
JCR18_RS16115 3352238 .. 3352250 -  -3.5  -3.63968   TTTTAAAGTTTTAAA                TAAAA GAC TTTTA                CCAAAAAAAAATTTA  52 46
JCR18_RS16110 3351785 .. 3351812 -   -15  -4.81249   GTTGAAATGTAAAAA        GGTAGAGATCAC GCCT GCGATCTCTACC         AAAATGTAATTAAAA 100 49
JCR18_RS16105 3351237 .. 3351279 - -14.7  -3.41738   GCGTTAATAAATACA TAAA-TAAAAAAAGCAGCTT TTAG AAGCTGCTTTTTTTAATTTA ATTTTACACCTGAAC 100 29
        pilG NONE
JCR18_RS16075 3343428 .. 3343444 -  -2.2   -4.4009   CTCGATCCTATAAAA              CGGG CGTATTTAT CCCG              TTATTTATGTTTTTA  57 53
JCR18_RS16070 3342849 .. 3342870 -  -5.2  -4.82901   TTCTCCCCAGAAAAA           TACGCTGT TCATTC ACAGCATA            AAAATTAGTTTATAA  74 30
JCR18_RS16065 3340712 .. 3340737 -  -4.8  -4.13014   CTCATACTTTTAAAA         GAATAGCGAT ATGAGA ATAGCTATTC          TTATCCCCCAATTTA  62 38
JCR18_RS16060 NONE
JCR18_RS16055 3335596 .. 3335613 -  -9.9  -5.92399   CAATAAAATAAAAAA             GGAACTC AAAA GAGTTCC              TTTTTCTTTTATAAA 100 34
JCR18_RS16035 3332690 .. 3332712 -  -9.4  -4.07568   TGTCTTGCGCCAAAA           TTAAAAGATT ATC AATCTTTTAA           TTTTGGCTCAGGACG  86 14
JCR18_RS16030 3332102 .. 3332112 -  -5.4  -3.09429   AATAATCTTTAAAAT                 CCTA TTT TAGG                 TTAAAGATTGTTCAG  54 21
JCR18_RS16025 NONE
JCR18_RS16020 NONE
JCR18_RS16015 NONE
JCR18_RS16010 3331475 .. 3331488 -  -3.9  -3.04144   GCTGCACTTGCAATA               CTTTA AAAA TAAAG                TATGGTCACAAATTA  48 41
JCR18_RS16005 3331360 .. 3331389 -  -6.5   -2.6927   AGTCTTTATACATTA       CATCCTCTAGATC AGGG AATCAAGAGAATG        GCGCAGCGGACGGGG  57 24
JCR18_RS16000 3331200 .. 3331216 -    -3  -5.24449   CAGAAACGCAAAAAA              CACTAA ATAAA TTAGCG              TGTTTAATTTTTTAA  71 55
JCR18_RS15975 3323216 .. 3323241 -  -9.1   -2.6428   AAAGATGCAAGCAAG         CCACTCTCTTA AAAT CAAGAGAGTGA          TTGGCTTTTTGCTTG  72 14
JCR18_RS15965 3321728 .. 3321759 -  -5.2  -3.10082   AAAAACTGGATTTAA      GCCAATAAGCATAT TTAC ATATACTTTTGGGC       GAATGTCTAAACTGG  54 50
JCR18_RS15960 3321430 .. 3321447 -  -7.7  -5.80003   GCAATAAACAAAAAA             GCCCCTA AAAA TAGGGAC              TTCTTCAGTACATTT 100 39
JCR18_RS15955 3319853 .. 3319872 -  -8.6  -5.42259   TTATGCCGAAAAAAA            GCCCCTTA TTTC TAAGAGGC             TTTTCTTACAAAATT 100 39
JCR18_RS15950 3318700 .. 3318712 -  -6.2   -5.4505   TTTTTCAACAAAAAA                GCCC TTAGC GGGC                TTTTACTTAATTTTT  88 59
JCR18_RS15945 3317132 .. 3317164 -  -2.1  -3.26758   AAGGAATACTAAAAC      CTAAACCTTAAAATT GTG AAGGCTAAAGTTTAG      AGAATTGTCAATTTT  44 174
        sbmA 3315860 .. 3315873 -  -9.5  -5.73339   ATAATCATAAAAAAA               CCCGC TTTC GCGGG                CTCTTTTTACTTATG 100 32
JCR18_RS15930 3313855 .. 3313882 -  -3.4  -2.78384   GTTCTTTTTATCACA        GAGTCACTAAAG TTAC CTGTTATGACTC         TGTAACCACAAAGTA  44 42
JCR18_RS15925 3313241 .. 3313275 - -10.3  -3.38046   TCTTCACCCCAAATA    CAATAAAGCCTGC-AT TTAG ATAGCAGGCTTTATTA     CTAAAATAGAAAACT  85 47
JCR18_RS15895 3306481 .. 3306493 -  -3.3  -3.07655   GTCTTGAAAAAATAT                TCGGT TGC ACCGC                CTAATCCTTAAACTT  46 39
        mreC NONE
        mreD 3305155 .. 3305171 -  -3.7  -4.33754   AACTAGAAGCTAAAA              CTAAATG CGC CATTTTG              CTAAACAATAATAGA  58 9
JCR18_RS15880 3304552 .. 3304578 -  -3.7  -2.53263   GGGACTGTTAATGTA         GCTTTGTCCAT TGTTC ATCGACAATGC         AATTCAATCAAGAAT  44 54
         rng 3302979 .. 3302990 -    -3   -4.2231   AAGTAGTATTTAAAA                TTCA TGAA TGAA                 AGTAAAATTTCAGTT  57 74
JCR18_RS15870 3302704 .. 3302728 -  -7.2    -3.445   CGAGTTAGGAAAAAT          TAAGGGGC TTTAAAATG GCCCCTTA          TTTTTTAATTGCGCG  68 23
        thrH 3299556 .. 3299584 - -17.7  -3.85724   AAAAACCAATCTAAA        TAAAAAAGGCGCT ATA AGCGCCTTTTTTA        TTGTGTATTTGTCCT 100 44
JCR18_RS15840 3295410 .. 3295425 - -10.4  -2.85581   AAATATTAAGAGAAC              GTGGGC ATGT GCCCAC               TCCACCGAGCTATTT  73 129
JCR18_RS15825 3292376 .. 3292391 -  -7.6  -5.64274   TTAGGCATAAAAAAA              CCTAGA TTTC TCTAGG               TTTTTATCCTTAATC 100 47
JCR18_RS15820 NONE
JCR18_RS15815 3290268 .. 3290306 -  -3.2  -4.61747   TTAATAATTATAAAA   TTTCAGTTTAGGCAAACA TGT CATTCACCTAAACTGTCA   CAGATAAGATTAAGC  62 35
        hchA 3289106 .. 3289125 -  -6.4  -5.09245   TTAAAACTATAAAAA            GTCATTGC CTCG GCAATGGC             TTTTTTGTTTATAAT  82 138
        prpF 3286108 .. 3286140 - -17.3  -2.59881   TATGGATGTCAGAAG      TAAAAAGCCTCTCTA GGG TAGAGAGGCTTTTCA      TTTAAATGACTTTTA 100 38
JCR18_RS15790 NONE
JCR18_RS15785 3284621 .. 3284640 -  -7.8  -4.88918   TTACTTGAAATAAAA            CGGTGACA ATCA TGTCGCCG             TTTTTTCTTTTATAT  87 40
JCR18_RS15760 3279698 .. 3279730 - -10.1  -3.56568   CAACCATCCTCCAAA      TTTGATTGCATTAAT TTT ATTACCGCAATCAAA      ACCAATTTTAACGCT  84 446
JCR18_RS15755 3278248 .. 3278271 -   -14  -6.08342   TAACAAATAAAAAAA          GACGAGGTTA AGTT TAACCTCGTC           TTTTCTATTTTTAGC 100 55
JCR18_RS15750 NONE
JCR18_RS15745 NONE
JCR18_RS15740 3273984 .. 3274003 -  -2.8  -4.94243   TTAAAAAAATTAAAA            CCTTATCG CTGG CAATATGG             CTATATGTTTTTTGT  68 441
JCR18_RS15720 3270156 .. 3270175 -  -2.2     -3.37   TTAAGTGTTAAAAAG            CCTAAAAT TTAT ATCTTAAG             AAATCCACCAAATCA  44 21
JCR18_RS15715 3269065 .. 3269075 -  -3.2  -3.83169   TAGAAACTGATTAAA                 GCAC CCC ATGC                 CCCAATAACATCTCC  52 10
JCR18_RS15710 3268300 .. 3268327 -  -9.9  -3.55524   AATTAGTTAAATGAA        CCCAGAATCTG TGCAAG CAGGTTCTGGG         TTTTCTATATTTAAA  84 36
JCR18_RS15700 NONE
JCR18_RS15695 3263673 .. 3263687 -  -2.8  -3.14132   GGGTTTTTCCATCAA               TTTAGC ACG GCGAAA               TCTTTTTTTTATTTC  43 34
JCR18_RS15690 3262884 .. 3262899 -  -5.4  -4.83615   GAGCTTCTAGAAAAA              GAGCAA CAAT TTGCCC               ATATCAGAATTGATA  79 333
        rplU NONE
        rpmA 3251464 .. 3251480 - -12.3  -5.61596   ATTTCCATAAAAAAA              GCCCACA AAA TGTGGGC              TTTTTCTTAAGCTAA 100 44
        lolA 3250525 .. 3250549 -   -13  -5.03994   CTTGATATATAAAAA          GAAAGCCATC GTAAA GATGGCTTTC          TAAATAATCAGGCTT 100 39
JCR18_RS15625 3249639 .. 3249653 -  -5.8  -2.50252   ATTCTTAGAATAGAT               CTTATA TTT TATAAG               TTATAGTTCGGTACA  54 19
        serS NONE
        cobA NONE
JCR18_RS15610 3246211 .. 3246257 - -12.8  -3.91801   AAAATACTAGAACAA GCT-TAAATAAAAATAAGGCC ACTAAG GGCCTTATTTTTATTTAGAAC TTAAGAAATTAACCT 100 34
JCR18_RS15600 3245127 .. 3245142 - -10.4  -5.66229   ATGAATAACAAAAAA              GGCGCT TAAA AGCGCC               TTTTTTTATGGACTC 100 42
JCR18_RS15565 NONE
JCR18_RS15560 3237355 .. 3237370 -  -6.8  -5.69068   TAAAAACATAAAAAA              CGCCCT AGAA AGGACG               TTATTTATTATTTCT 100 50
JCR18_RS15555 3236010 .. 3236041 - -14.6  -2.60714   GTAAACGTTTATAAT      TAAAAGAGGGCATC ATTT GATGCCCTCTTTTT       TCTATTTTATTTATA 100 32
JCR18_RS15545 3234436 .. 3234451 - -10.4  -5.17576   CATTAATGTAAAAAA              GCTGCC TAAT GGCAGC               TTTTTTTTATAAATA 100 53
        sdhC NONE
        sdhD NONE
JCR18_RS15525 NONE
JCR18_RS15520 3228803 .. 3228821 - -13.2  -6.31682   AAAATTAAAAAAAAA             CGCACATC AAG GATGTGCG             TTCTCTATTTGCGCA 100 44
JCR18_RS15505 NONE
        odhB 3224186 .. 3224212 -  -9.5  -3.87815   TTTTATCTCCATAAA         CCAGGATAGAG GATTA CTCTACCCTGA         TAGGTATTTATTCGA  83 46
        lpdA 3222715 .. 3222730 - -10.4  -4.67234   ATCGAATGTGAAAAA              GAGCGG AGGA CCGCTC               TTTATTTTATTTACG  95 32
        sucC NONE
        sucD 3220468 .. 3220493 -  -9.1  -5.86465   AATAATACAAAAAAA         TACCGCATC ATTTTTCA GATGCGGTA          TTTTTTAAAGATTCA 100 50
JCR18_RS15475 NONE
JCR18_RS15470 3216864 .. 3216884 -  -4.7  -4.60977   AACAGAACGAGAAAA            TAGGCAC CTCATGT GTGCCCA            AGCAATTAAAAAGTT  69 173
JCR18_RS15465 3214925 .. 3214936 -    -3  -4.78149   CCTACAACTTAAAAA                CATT AAGT AATG                 TGATCATTTTTACAT  65 381
JCR18_RS15445 3196607 .. 3196624 -  -9.9  -6.20267   TTAAAAATAAAAAAA             GAGAACC CTAG GGTTCTC              TTTTTCTGATGATTC 100 50
JCR18_RS15440 3194836 .. 3194858 -  -2.6  -3.41222   GCTTAATTTCAAATA           GAGGGTAAGT CAT ATCTCCCCTC           CTTCGAAATCTTTTA  46 12
JCR18_RS15435 3193031 .. 3193050 -    -5  -2.67902   CAATATTATGACAAG            TGCCGAAT GTAA ATTAGGCA             GTGGTGGCTTAAGAA  49 99
JCR18_RS15425 3191954 .. 3191983 -  -7.8   -5.0925   CGTTAAAACTAAAAA       GCCTGTCTAGCT TAATAC AGCAAGGCAGGC        AATTATTAAAATACT  89 42
JCR18_RS15395 3184776 .. 3184794 -  -8.9  -6.04324   TTAAAAAACAAAAAA             GCGAGAA ATTAA TTCTCGC             TTTTTTTATTAACTT 100 55
        rlmE 3182969 .. 3182981 -  -3.4  -3.90316   ATCGTCTTAAAAACA                GCAA TTGTC TTGC                TTGCGGATAACCTAA  54 84
        ftsH 3180971 .. 3181000 - -13.1  -4.25401   CAAAGTTAAGACAAA       TAAAAAAGCCACA TGAC TGTGGCTTCTTTA        TTAATTAACTTAATT 100 35
        folP 3179909 .. 3179924 -  -5.4  -3.54721   CAAAAGTTTACACAA              CAGCAA AAAC TTGCCG               CTTATAACATATTTT  58 128
JCR18_RS15365 3179568 .. 3179590 -  -9.2  -4.20883   CAAAAATTTTGAAAA           TCGAGAGTAA TCA CCACTCTCGA           TTCATCACCAACTCT  88 13
JCR18_RS15350 3177077 .. 3177094 -  -7.7  -5.42259   TTATGCCTAAAAAAA             GGGTTAC CTCA GCAACCC              TCTAATTTTCTATAA 100 43
        folD 3175809 .. 3175821 -  -3.3  -3.54307   AACATTTGCGTTAAA                CGGTA GGA TGCCG                CCGTGAATAAATTAA  50 42
JCR18_RS15330 3174917 .. 3174938 -  -5.8  -5.84432   CATAACATAAAAAAA           GGCGCTGT TCTCTT ACAGCGTC            TTATAAAAACTTACA  95 16
        glpK 3171040 .. 3171052 -  -6.3  -4.82678   TTATAAAAATTAAAA                CATCA AAT TGATG                AAACAACAATCAAAA  80 126
        glpD 3169457 .. 3169473 -  -9.4  -5.36441   GCTCTATATAAAAAA              GGTCGC CATGT GCGACC              TTTTTTATTATGCGG 100 33
JCR18_RS15300 NONE
JCR18_RS15295 3165425 .. 3165435 -    -4  -4.67635   TTTAAAATGATAAAA                 CATT TAA AATG                 TTTTCCTATTCCCCA  65 128
JCR18_RS15290 3155379 .. 3155398 - -10.8  -5.22137   AAGCACAAAATAAAA            GAGGCTAT TTTC ATAGCCTC             TTTCCTAAAGTTAAA 100 49
JCR18_RS15285 NONE
        groL 3153151 .. 3153168 - -11.3   -6.4275   GAAAAATAAAAAAAA             TCCCTGC GAAT GCAGGGA              TTTTTTTGGGTTAAA 100 55
JCR18_RS15270 3151554 .. 3151572 - -10.3  -5.61596   ATCTTCATAAAAAAA             CAGGGCA ATGAA TGCCCTG             TTTTTTTTATTTATC 100 32
JCR18_RS15260 NONE
JCR18_RS15255 3146353 .. 3146376 -   -14  -4.74103   CGTTTAATGTAAAAA          TAAAGCCTCC AAAT GGAGGCTTTA           TTTTTTGATTACATG 100 34
        ttcA 3142851 .. 3142881 -  -9.2  -2.88861   TAGTATTTTGATACA       TTAAAGGCACTT GTTTATA AAGTGCCTTCAA       TTGACTTATTAATTC  73 44
JCR18_RS15235 3142261 .. 3142291 - -14.3  -3.86015   CATTGTTTGTATAAA       TAAAAAGCTTACC TCTCG GGTAAGCTTTTTA       TATGAATTCTTTTTT 100 44
        greB NONE
JCR18_RS15220 3140026 .. 3140046 - -11.9  -5.96219   TATGCATAAAAAAAA            GCCCTTGTC ATT AACAAGGGC            TTTTTAAGAATTTTG 100 39
JCR18_RS15210 3134803 .. 3134822 -   -10  -5.28176   GTTATCTACAAAAAA            GCCCCTGT TTCT ACAGAGGC             TTTTTTCAATTCAAC 100 47
JCR18_RS15205 3133225 .. 3133245 - -11.3  -5.29846   AAGGGGAAATAAAAA            TAGCCTATT GAT AATAGGCTA            TTTTTAAAGCTAGAG 100 78
JCR18_RS15200 3131986 .. 3132019 - -15.5  -3.88603   AGCTAGAAAAACCAA     TCTATAAAAGCCCTC ATTA GCGGGCTTTTATAGA      AATAACTCTTTTAAT 100 62
JCR18_RS15105 NONE
JCR18_RS15100 3120832 .. 3120849 -  -9.9  -5.64274   TTATCCACAAAAAAA             CCTCATC AAAT GATGAGG              CTATGTTGCAATCTG 100 87
JCR18_RS15095 NONE
JCR18_RS15090 NONE
JCR18_RS15085 NONE
JCR18_RS15080 NONE
JCR18_RS15075 NONE
JCR18_RS15070 3116701 .. 3116716 -  -5.4  -3.25823   CTGTGTGCACAGTAA              CG-AGGC TAA GCCTGCG              GTAGCGCTTTTACCA  56 518
JCR18_RS15060 3115727 .. 3115750 - -15.4  -4.36914   TTGGCGGGGATAAAA          TCAGGCGGAA ATGC TTCCGCCTGA           TTTCTTGCGCTGTTT 100 147
JCR18_RS15055 NONE
JCR18_RS15050 NONE
JCR18_RS15045 3112306 .. 3112323 - -11.3  -3.12257   GGATAAAAAAGATCA             GGCGGAA ACAC TTCCGCC              CAGTTTATTTATTCT  87 40
JCR18_RS15040 NONE
JCR18_RS15035 NONE
JCR18_RS15030 NONE
JCR18_RS15025 NONE
JCR18_RS15020 NONE
JCR18_RS15015 3108144 .. 3108160 -  -2.9  -2.50994   TTCAACTGCATCAAT              TCGCTCA TTT TGAGCAT              CATCACGCTGCTGAC  42 282
JCR18_RS15005 3104947 .. 3104970 - -11.8  -3.57587   ACTATTTAAATAAGA          TCAGGCGGAA ATAC TTCCGCCTAA           TAATAAAAAAGACCG  95 76
JCR18_RS15000 NONE
JCR18_RS14995 NONE
JCR18_RS14990 NONE
JCR18_RS14985 3101758 .. 3101779 - -11.7  -5.15634   CAGCCCATGAAAAAA           TAACCTCAC TATT GTGAGGTTA            TGATGTGAAATACCA 100 84
JCR18_RS14980 NONE
JCR18_RS14975 NONE
JCR18_RS14970 NONE
JCR18_RS14965 NONE
JCR18_RS14960 NONE
JCR18_RS14955 NONE
JCR18_RS14950 3095540 .. 3095558 -  -3.2  -4.81685   ATTAAGGATGAAAAA             CTTTTAGA AGA TATAAAAG             CCTTTATTGCTCAAG  65 294
JCR18_RS14940 3094420 .. 3094430 -  -5.4  -3.53091   ATTGCGGTTGGTAAA                 TCTG CTT CAGA                 ACCTTATCCACGCGT  58 202
JCR18_RS14925 3092118 .. 3092142 -  -2.7  -4.25458   AATTTGACCAACAAA          CCTTAAGCGGT AAA ACCGTTTTTGG          GATAAGCCAAATTGC  57 260
JCR18_RS14915 3088365 .. 3088383 -  -7.4  -3.08046   CCTTTACTTCAAAAT             GGCGCT TGTTTAG AGCGCC             TTTTGCTTAAATTTC  64 62
        fdhD 3087456 .. 3087475 -    -3  -3.33261   TCTGAACCTTTAGAA            TTTTATAA TAAT CTATAAAA             ACTAACCTTAGCTTA  46 100
JCR18_RS14905 NONE
JCR18_RS14900 NONE
        genX 3084854 .. 3084883 - -15.3   -3.6512   TAAATAAGTTCTAAA       TAAAAAAGCCACA TTAT TGTGGCTTTTTTA        TTTCGTTGTTTTCAG 100 37
JCR18_RS14880 3080447 .. 3080466 -  -7.8  -5.30686   AATATGCATAAAAAA            CGCCAGCT TTTC AGCCAGCG             TTTGATCATAACCAA  91 51
JCR18_RS14875 NONE
        lysA NONE
        dapF 3077950 .. 3077983 -  -7.7  -4.85653   TACATATAAAAGAAA     GCCTCTTTT-ATCA CGTTAAC TGATGAAAAGAGGC     TTCTATTTAGGCCAT  87 45
JCR18_RS14855 3076186 .. 3076203 -  -2.8  -4.41348   TTTCTTTTAAACAAA             TTTGTA AAAAAA TACAAA              TGATCTCTACATTCT  58 65
JCR18_RS14850 NONE
JCR18_RS14845 3074064 .. 3074084 - -14.1  -5.79595   CTCTAAAACAAAAAA            CCCCTAGTT CAA AACTAGGGG            TTTTTAACTTTAATC 100 49
        gyrA 3070985 .. 3071014 - -10.9  -4.23391   GAAATAAACCAGAAA       TAAAAAAGGAAGC CGAA GCTTCCTTTTTTT        ATTTTAAAACGTTTT 100 39
        serC 3060564 .. 3060588 -   -13  -4.99035   TCATTTATATAAAAA          TAAAGCCCTC TTTTT GAGGGCTTTA          TTCATTTTATGACTT 100 39
JCR18_RS14780 NONE
JCR18_RS14775 3057549 .. 3057568 -  -6.5  -3.95214   ATTGATGGAAAAAGA            GAAGTGT TCATTC ACACTTC             TTATTTAGCCATATC  66 219
JCR18_RS14770 NONE
        lolD 3055550 .. 3055575 - -10.6  -4.11394   ATTTTAGGGGCAAAA         TTAAAGCCCA ACTCAG TGGGCTTTAA          CAATGTGATTTAATG  91 50
JCR18_RS14760 3053073 .. 3053095 -  -5.6  -3.60234   GTAGATAGGCTCAAA           GCAGAAGCTT TAA AAACCTCTAC           TCAACCAGAGCCTAT  58 12
        sppA NONE
JCR18_RS14745 3050128 .. 3050145 -  -9.9  -5.27477   ACGTCAATTAAAAAA             GGACATG CATG CATGTCC              TTTTTTTGCGAAAGC 100 45
JCR18_RS14730 NONE
         hda 3046237 .. 3046250 -  -2.5  -4.39568   ATTGATATATGAAAA               TTTTA CTTA TAAAA                ATTTAAAAGTATTTT  58 132
        rbtA 3044045 .. 3044073 -  -8.9  -2.80612   GGCAATTTTAAGAAG        GCAGAACCCTGAT AGG ATAAGGGTTCTGT        GAAATTTGTCGTGTA  73 142
JCR18_RS14710 3040499 .. 3040551 -   -11  -4.98531   TTTTGAAATTAAAAA GTTACTAACAAATAAAAAAGCCTCC TAGT GGAGGCTTTTTTATTT-TTATCATC ACTTACGATAACGTC 100 24
JCR18_RS14680 3036781 .. 3036804 -   -14  -5.10077   AAACATCCCAAAAAA          TAAACGCCCA CATA TGGGCGTTTA           TTTTTACATTCTTAC 100 42
        purL 3022897 .. 3022918 - -13.1   -4.1523   TGTACTACATACAAA           TAAGCCACC TTAC GGTGGCTTA            TTTCAATTTTTATAT 100 40
JCR18_RS14620 3021304 .. 3021320 -  -5.1  -3.63073   CATACCCTTTAAGAA              GACTCCG AAT CAAAGTC              AGCTCATCATTGCTA  58 350
JCR18_RS14615 3020433 .. 3020444 -  -4.4  -3.55444   TTTGTACTCCTTAAA                TCTG CTGC CAGA                 TTATCGAAGCCGCTT  54 514
JCR18_RS14605 3018990 .. 3019008 -    -6  -2.99727   TGCAATTAATCAAAT             TCGACAAG ATT CTCGTCAA             TGTGGTCAGCAGTAT  56 453
        carO 3013603 .. 3013616 -  -8.1  -5.76633   TTAGATATAAAAAAA               CGAGC CGAA GCTCG                TTTTTACGCTTTATT 100 39
        pabC 3006960 .. 3006972 -  -4.9  -3.25823   GCTTCGGCATATTAA                TGAAT CTG ATTCA                AGTTAAGAGTATGAA  54 9
        mltG NONE
JCR18_RS14520 3005258 .. 3005271 -  -2.3  -3.11522   CAAAAAAATATGAGA               GTGGG TAAT CCCAT                GGCTTATGCTAAATA  42 29
JCR18_RS14515 3004685 .. 3004702 -  -8.4  -5.24129   GTTTTTTATAAAAAA             GCACGG TTCATG CCGTGC              TTTTTTATTACTTAA  93 44
JCR18_RS14505 3001380 .. 3001398 -  -7.4  -5.74288   ACAAATAATAAAAAA             CCACCC ATTTTCA GGGTGG             TTCATTTTTATAATA 100 43
JCR18_RS14500 3000758 .. 3000777 -  -3.6  -2.88708   AGAGATTATAGCAGA            TGGATATT TTAA AGTATCCA             AAATTCATGAGCTTT  45 91
        lepA NONE
        lepB NONE
JCR18_RS14485 NONE
         rnc 2996875 .. 2996888 -  -5.3  -3.41602   TTGATTTGATCAGAA               TGCAT CGAC ATGCA                GGTTATTGCTCCAAT  58 28
         era NONE
JCR18_RS14470 NONE
        recO NONE
        pdxJ NONE
JCR18_RS14455 2993482 .. 2993501 -  -6.5   -5.4833   CTACTTAATAAAAAA            GTTTACC GTGAAA GGTAAAC             TTTTTAACTTGAGGT  88 49
JCR18_RS14450 2992362 .. 2992382 -  -3.2  -5.96219   TACCTATAAAAAAAA            TCCCCTGC TGCCT GTAGAGGA            TTTGCTTTTCATAAT  85 116
JCR18_RS14440 2992026 .. 2992040 -  -2.8  -3.54459   GCAAGTTGGTTTAAA               TCCACA CTG TTTGGA               TTACTCCAAACGCTT  46 6
JCR18_RS14435 2991252 .. 2991270 - -10.4  -2.69433   CAAGCAGATCATAAT             CACCTAAA TCC TTTAGGTG             GTGTACATGGTGGTT  72 306
JCR18_RS14425 2989773 .. 2989789 -  -5.1  -3.54051   ACAAATTTCACAGAA              CCCTTAT CCT ATCAGGG              TTCTGCCTTCTTAAA  56 1
JCR18_RS14420 2989270 .. 2989306 - -13.4   -4.2573   TAAATAATTTGAAAA   TATAAAAAAAGGCCTCA AAAT TGAGGCCTTTTTT-ATA    ATTAAAATTATTCTA 100 33
JCR18_RS14410 2987610 .. 2987624 -   -10  -5.67063   TCTACCATAAAAAAA               CAGGCA TAT TGCCTG               TTTTTTTATTTAAAT 100 40
        uvrB NONE
JCR18_RS14390 2982281 .. 2982310 - -13.1  -5.31877   ATCCACTATAAAAAA       GAAAAAACCATGC GAAA ACATGGTTTTTTC        TTAAGCAGTATATAT 100 41
        rarD NONE
JCR18_RS14380 2979542 .. 2979557 -    -9  -5.40474   ACGGTTGTAAAAAAA              CCCAGT CTAA ACTGGG               TTTTTTTGTCACATT 100 64
JCR18_RS14375 NONE
JCR18_RS14370 2977916 .. 2977928 -    -2  -4.39426   CATATTTTCAGAAAA                TTCT CGAAT AGAA                AATCGAGAGAATTCT  57 123
        cgtA NONE
JCR18_RS14360 2975456 .. 2975472 - -12.3  -5.63504   AACCCCACAAAAAAA              GCTCGCA TGA TGCGAGC              TTTTTTAATTTAGAA 100 45
        dusB 2972491 .. 2972522 -  -8.1  -2.77888   GAATAGATAAAAATT      CCAAGCAACCAGT CTCTGT ACTGGTTGCTTTA       TTTTAGTGAGTATCT  67 28
JCR18_RS14330 NONE
        wecB NONE
JCR18_RS14275 2955417 .. 2955435 -  -6.7  -5.77571   AGGAAAAAACAAAAA             CCGATGC ACGAA ACATCGG             TTTTTTATAAATTAA 100 52
JCR18_RS14270 2952776 .. 2952795 -   -15  -5.69262   TTATAAAAATAAAAA            GCCGGTGC TTAT GCACCGGC             TTTTAGCTATGTACT 100 54
         icd 2950431 .. 2950446 - -10.4  -4.21827   CTAAAGACTTTAAAA              GCCCTC AATT GAGGGC               TTTTCTATGAAAGTT  95 40
JCR18_RS14235 2946745 .. 2946760 -  -3.2  -3.23042   AATATTGATGATTAA              GGGTAT ATTC ATTCCC               AAACTCCAAATTATT  46 219
JCR18_RS14230 2945324 .. 2945347 - -11.8  -5.77988   ACACATATAAAAAAA          CGGCTCATCCA GAG TGGA-GAGCCG          TTTAATATTAACTCT 100 40
JCR18_RS14225 2944372 .. 2944389 -  -9.9  -5.79526   AGATTTGAAAAAAAA             GCCGTTT ATTT AAACGGC              CTTATATTTTAAGGA 100 34
JCR18_RS14220 2941474 .. 2941500 - -12.5  -3.68529   ATTTTACCACTCAAA         TAAAAAGCCAC ATGAA GTGGCTTTTTA         TTTGGCAATTATTTA  95 38
JCR18_RS14210 2940305 .. 2940338 -  -5.9  -2.77013   CATTTTGGTAAGAAT     CTTGAAGTCGCGGCA AATA TGCCGCGACTTTTTA      TCTATATTTACCAAA  55 23
JCR18_RS14200 2938231 .. 2938266 -  -5.5  -2.66538   ATAAGTCATCATAAG    TACCGATTGATATAG GCTTAT CAGTACCAATCGGTA     TATTAAAAATAGAAA  52 47
JCR18_RS14195 NONE
        hemL 2936194 .. 2936210 - -12.3  -4.99134   AGCTCAAATTAAAAA              GCCCGTT TAA AACGGGC              CTTTTTGCTTACTTC 100 34
JCR18_RS14185 2935440 .. 2935451 -  -7.2  -2.70936   TTATGAATCACATTA                CGGC TAAA GCCG                 ATTAGAGCTTCAATA  62 27
JCR18_RS14180 2934620 .. 2934658 -  -7.1  -4.54727   GTCTTTAAAGCAAAA  TTTTGCAGCAGAAACCAAT TAA ATTG-TTTC-GCTACAAAA  ATTACTCATTGAAAG  80 49
        rapA 2931666 .. 2931680 -  -8.5   -5.4833   TTACTCAATAAAAAA               GCGCC TGTGT GGCGC               TTTTTTTATTACTCA 100 45
JCR18_RS14160 NONE
JCR18_RS14155 2927420 .. 2927437 - -11.3  -6.11392   AAAGAAATAAAAAAA             GCCCTGA ATTC TCAGGGC              TCTTTTATCTTATTT 100 35
JCR18_RS14145 2926162 .. 2926178 -    -8  -4.27316   TTTTTCAATCTAAAA              CCGCAT TCTTC ATGCGG              TTTTTTTATTGCTCG  83 44
JCR18_RS14135 NONE
JCR18_RS14130 2922026 .. 2922044 -  -5.9  -5.49234   ATATGTAATAAAAAA             GCCCGGC AATAA ACCGAGC             TTTTTGGGGTATCAA  86 46
JCR18_RS14125 2920326 .. 2920344 - -10.3  -5.49568   AAGTGAAAATAAAAA             GGCGGAT ACTAA ATCCGCC             TTAAAACTAATCTTT 100 39
JCR18_RS14115 2917859 .. 2917885 - -15.2  -2.83164   TTATTCAGCACTATA         TCCGAAGGCCAG AAA CCGACCTTCGGA         CATAAGTTGCTTTAG 100 85
JCR18_RS14110 2916373 .. 2916400 - -12.8  -5.56263   ATGACAAAACAAAAA        CGGTTATCTGTC ATAT GTCAGATAACCG         CAATATCACTGTAAA 100 50
JCR18_RS14105 2914895 .. 2914922 - -12.1  -4.96848   CGTGTTAGACAAAAA        GGCTGATGATC GCTTGA GATCACCAGCC         CCTATTCAAACCAAC 100 41
        pstC NONE
        pstA NONE
JCR18_RS14090 2911114 .. 2911126 -  -4.8  -5.99154   TATTAAATAAAAAAA                GAGC ACTAG GCTC                TTTTTCTTTTACAAC  93 47
        sohB 2909995 .. 2910015 -  -3.9  -5.24129   CTTTCGCATAAAAAA            GAGCACCCC TAA AAGGCACTC            TTTAATTTGAAAATA  74 49
JCR18_RS14080 2907538 .. 2907552 - -11.4  -5.48054   ATTAAAATTAAAAAA               GCGCTC ATT GAGCGC               TTTTTACATGTTGTC 100 50
        surE 2899077 .. 2899093 -  -6.6  -3.96447   GTACCAAAAAAGTAA              GAGGAA ACATG TTCCTC              TTTTTCTTTATTCAC  71 67
JCR18_RS14025 NONE
JCR18_RS14020 2897117 .. 2897136 - -12.2  -5.38047   CACTGACATAAAAAA            GGGCTTGT TTTT ACAAGCCC             TTTTCTATGAATGAG 100 48
JCR18_RS14010 NONE
        gloA 2891632 .. 2891647 -  -7.6  -3.89524   AGCCCAGTTGATAAA              TTGACC ATTT GGTCAA               GCCTTCATCATACTG  74 101
JCR18_RS14000 2890498 .. 2890509 -  -4.4  -3.82499   ATTAAATTGAGGAAA                GCTT TTAC AAGC                 AGATCAACACCACAA  58 134
        rpmE 2890157 .. 2890184 - -17.2   -4.8048   CTTGTATATTAAAAA        CAAAAAACGGGC ATAA GCCCGTTTTTTG         TTTCGTTTTGAAGTA 100 41
         efp 2884566 .. 2884585 - -10.8  -5.60993   TTTCGCATAAAAAAA            GGGATGAT TGAC ATCATCCC             TTCGATAATAGTTTA 100 52
JCR18_RS13970 NONE
JCR18_RS13965 2881990 .. 2882014 - -11.5  -4.77757   TCCCAAAAAGTAAAA          CGGTACATGGT TCA ACCACATACCG          TCTTTATTTAGCCAA 100 55
JCR18_RS13960 2881727 .. 2881751 - -13.7   -5.9003   AAAGTAATAAAAAAA          GCCCTAAACCA TTA TAGTTTAGGGC          TTTTTTAAGTCATAT 100 73
JCR18_RS13955 2881087 .. 2881112 -  -4.8  -3.80133   TAGCCTTAGAAAATA         GGGAAAAACT TTTTTT ACTTTTTCCC          TTTAATTTTTTCATA  60 14
JCR18_RS13950 2879888 .. 2879923 -  -7.6  -3.86776   TAATGAAGTACCAAA    GGGATAACAGCACTCT TTAA ATAGTGCTATGACCCC     AAAATAACAATATGA  74 50
JCR18_RS13945 2879222 .. 2879249 -  -7.8  -2.91276   TCTGGGTTTATAAAG        GTGAGAACCTCT TTTA AAAGATTCCCAC         TCATTCACAGTGCCT  66 77
JCR18_RS13940 2877662 .. 2877687 -  -6.2  -3.28924   GATTCTTTTTTATAA         GATTACTCTC TCCCCC GAGCGTAATC          TTATTAACCAGTAAA  61 403
JCR18_RS13930 NONE
JCR18_RS13925 2874266 .. 2874287 -  -3.1  -3.00994   TTAACTTTAGATATA           TTCCTTA CTTTTCCT TAAGGAA            ATGATTGAATTAATA  45 35
JCR18_RS13920 2872688 .. 2872715 - -13.6  -5.13741   TTAATTTAAGAAAAA        TGGCTTAAACCC CTTG AGGTTTAAGCCA         TTAAGCTATCTTTTT 100 54
JCR18_RS13910 2868625 .. 2868659 -   -19   -3.0792   GAATATTCTATTTAA     TAGAAAGAGAGTAATT AAA AATTACTCTCTTTCTA     TTATTAATTTTTCTA 100 128
JCR18_RS13895 NONE
JCR18_RS13890 NONE
JCR18_RS13885 NONE
JCR18_RS13880 NONE
JCR18_RS13875 2858919 .. 2858954 -  -3.4  -4.95547   CTCATAAGAATAAAA    TGACCCACATTATT TTTTCCTG AACAATATGGGTCG     TTTCTTTTATGCAAT  69 32
JCR18_RS13870 2857525 .. 2857556 -    -3  -2.74792   TTATTATTCCTAAAC      GGCTTCAGGAAGCT TTTA AACTTCCTGAAAAT       TGATAAATGAAAAAC  42 53
JCR18_RS13865 2856836 .. 2856847 -    -3  -3.82098   CATAACCAAGCGAAA                TTAG CTTC CTAA                 TTTCTTAGTCACAGC  52 71
JCR18_RS13825 2848685 .. 2848708 -  -5.9  -4.07885   CACGGTCTGCTAAAA          CCGACTGGC AATGTG GCCAGCAGG           CAAAGGATAAGCTTC  67 294
JCR18_RS13820 NONE
JCR18_RS13815 2847248 .. 2847267 -  -7.9  -4.12942   TTAAACTGCTTAAAA            GCCCTTT TATATG AAAGGGC             TTTTTAGTCACTGCT  77 29
JCR18_RS13800 2844408 .. 2844441 -  -6.9  -3.24902   CAACATTATCAGGAA     CATATTCA-GCAAGGT AAG ACCTTGAACGAATATG     ATGACCTCGATTTGG  63 45
        basA 2841312 .. 2841352 - -12.2  -2.94333   CCCTAAAACCAACCA  TGTGCTTAAAAGCAAA CATCTCGAC TCTGCTTTTAAGCACA  TTTCAATTTTTCTAT  90 37
        bauD NONE
        bauC 2836751 .. 2836761 -  -3.2  -3.14404   ACATGAATCATGCAA                 CACC TCG GGTA                 CGAACCGTCAGCGCA  45 7
        bauE NONE
        bauB NONE
        bauA 2832581 .. 2832610 - -16.7  -2.82453   AAAATATGAATATCA       TAAAAAAACCCGC GATT GCGGGTTTTTTTA        TTCGGTTGAAGATTA 100 48
        basE NONE
        basF NONE
        basG 2824214 .. 2824228 -  -2.2   -3.3422   TATTTTTTTAAAAAC               TTTAAT TGC ATCAAA               AACTTCCTAACCACC  44 118
JCR18_RS13730 NONE
        barA NONE
        barB 2820440 .. 2820468 -  -8.9  -2.80612   GGCAATTTTAAGAAG        GCAGAACCCTGAT AGG ATAAGGGTTCTGT        GAAATTTGTCGTGTA  73 431
        basI 2818091 .. 2818109 -    -4  -2.98034   CATTAATGCAAATGA             TTATTATT ATC AATAACAA             ATTTAGTTTTCAATG  47 28
        basJ 2816715 .. 2816731 -  -9.4   -3.8125   CTCTTAATTAAAAGA              GCCTGC TTTAT GCAGGC              TTTTTTATTAAATTT  83 112
JCR18_RS13685 2814078 .. 2814088 -    -4  -3.75067   TATTGCACAAAAAAC                 TATC CTA GATA                 TTTAGCACTATATTC  53 14
JCR18_RS13680 2813275 .. 2813285 -  -2.6  -5.46706   AGTGTAAAAGAAAAA                 TTTA TCT TAAA                 TTCCAATTACCTTGA  72 16
JCR18_RS13675 2812627 .. 2812644 -  -9.1  -5.33331   TAAATATAAGAAAAA             CCCTGCC AAAT GACAGGG              TTTTCAATTTCAAAC 100 41
JCR18_RS13670 2810660 .. 2810684 -  -7.3  -6.09196   CCTAAAATAAAAAAA          GAGAAATAG TCATCAT CTATTTCTC          TATTTTTTATAGGTA 100 47
JCR18_RS13660 2808162 .. 2808178 -  -7.9  -4.87133   ACTGCCTAAATAAAA              GCCCGAC AAT GTTGGGC              TTTTTTTATAGCTGA  87 163
        xdhA NONE
        xdhB NONE
        xdhC 2802446 .. 2802461 -  -7.6  -6.09888   TTCGAACAAAAAAAA              TGATCC TTTG GGATCA               TTTTTTTACATCAAA 100 23
JCR18_RS13620 2796745 .. 2796777 -  -4.3  -5.27938   AGTTTTAAATAAAAA     GATGCAGC-AAATG CTGTAC CACTTCACTGCATC      CATACATCATTCTTA  77 38
JCR18_RS13615 2793972 .. 2793991 -  -8.6  -5.45652   ACCCTTAATAAAAAA            GCCAACTA CGAT CAGTTGGC             TTTTTTATGGCTGAA 100 45
JCR18_RS13535 NONE
JCR18_RS13530 2784847 .. 2784872 -  -3.9  -3.89614   TTGAATGCCTATAAA         CCACTCTCTAC CTGG ATGGGGAGTGG          TTTTTTATTTGAATA  56 30
JCR18_RS13525 NONE
JCR18_RS13520 NONE
JCR18_RS13515 NONE
JCR18_RS13510 NONE
JCR18_RS13505 NONE
JCR18_RS13500 NONE
JCR18_RS13495 NONE
JCR18_RS13490 NONE
JCR18_RS13485 NONE
JCR18_RS13480 NONE
JCR18_RS13475 NONE
JCR18_RS13470 NONE
JCR18_RS13465 NONE
JCR18_RS13460 NONE
JCR18_RS13455 NONE
JCR18_RS13450 2775760 .. 2775777 -  -9.1   -5.8901   ACATAAAACAAAAAA             GCTCACC ATTT GGCGAGC              TTTTAAAACATTTTG 100 101
JCR18_RS13445 2775485 .. 2775498 -  -8.1   -5.4659   TAACATAAACAAAAA               CCTCC CGAA GGAGG                CCAAATATAATTACT 100 36
JCR18_RS13440 2775116 .. 2775138 - -12.8  -5.46698   TTTAAAATCAAAAAA           CCCGTTCCTA AAT TAGAAACGGG           TCACAAAAACAAAAA 100 106
JCR18_RS13435 2774586 .. 2774596 -  -2.6  -3.29372   GGAATGTAAACAAAT                 TTAA CCT TTAA                 CATTGCAGAAAATTA  44 22
JCR18_RS13430 2774247 .. 2774260 -  -8.1  -5.45652   ATGGGCAATAAAAAA               CCACC CGAG GGTGG                TTTAAATTAAATCTC 100 27
JCR18_RS13425 2774035 .. 2774050 -  -3.2  -4.08216   CTACGCTCCTTAAAA              GAAGCC CTCA GGCTTA               TTGTTGAGACGTGCA  55 4
JCR18_RS13420 NONE
JCR18_RS13415 2772927 .. 2772940 -  -8.1  -6.00086   ACAGGACAAAAAAAA               GAGCC AAAA GGCTC                AATTGATTACACAAT 100 24
JCR18_RS13410 NONE
        terL NONE
JCR18_RS13400 NONE
JCR18_RS13395 2768405 .. 2768435 -  -2.7  -3.91144   TTCATATTGTATAAA       TTCTGATGTTTTA AAAAA TATAACATAAGAA       AAAATTACAGACCCA  51 30
JCR18_RS13390 2767929 .. 2767943 -  -4.2  -4.64846   CCATAAATGACAAAA               GCGC TGTTTGG GCGC               TTTTATAGGTGAAAA  65 84
JCR18_RS13385 NONE
JCR18_RS13380 2767460 .. 2767473 -  -8.1  -5.40072   CTTCTCGCAAAAAAA               GCACC CGAA GGTGC                TATGGTTAAAAATTA 100 45
JCR18_RS13375 2767093 .. 2767108 -  -8.2   -5.1675   GCAGGCATTAAAAAA              GCGCCC CTTA GGACGC               TTCATTTCGATTAAA  93 44
JCR18_RS13370 NONE
JCR18_RS13365 2765221 .. 2765238 - -11.3  -5.64873   CTTAATAATAAAAAA             GAGGGCT TATT AGCCCTC              TTACGGTTTTAATTT 100 48
JCR18_RS13360 NONE
JCR18_RS13355 NONE
JCR18_RS13350 2763730 .. 2763751 -  -9.5  -3.36327   CGACTCTACTCATAA           TATCCCCCT GCTC AGAGGGATA            TTAGATCAAGTATTT  78 39
JCR18_RS13345 2763065 .. 2763078 -  -8.1  -5.52384   CGCCCATTAAAAAAA               CCCAC CGAA GTGGG                CTATGAACTATTCAA 100 33
JCR18_RS13340 NONE
JCR18_RS13335 NONE
JCR18_RS13330 NONE
JCR18_RS13325 2761594 .. 2761608 -  -7.1  -5.77988   ATAGATATAAAAAAA               CCACC GATGA GGTGG               TAGTGAATAAGGCAT 100 80
JCR18_RS13320 NONE
JCR18_RS13315 2760046 .. 2760062 -  -8.7  -5.40474   ATGGGCGTAAAAAAA              CCCGCTA AAA TAGCGAG              TTGTTAAAGTGTTTC 100 29
JCR18_RS13310 2759005 .. 2759038 - -11.9  -3.95219   CTGAAATTTTAGAAA     TAAAAAAGCCCATGG GATT CCATAGGCTTTGTTA      CTGAATAAGTTGATT 100 39
JCR18_RS13305 2757988 .. 2758002 -  -7.2   -3.1355   GGCACCTAGAGGCAA               CGTATT TAC AATACG               TTTACGATTATCGCA  64 489
JCR18_RS13300 2757106 .. 2757117 -  -7.2   -5.4505   TCTTCTAACAAAAAA                GCCC TTCG GGGC                 TTTTCTCTACATAAA 100 113
JCR18_RS13290 NONE
JCR18_RS13285 2755075 .. 2755097 - -12.8  -4.44914   TACTTAATAAAATAA           GAGCACCCAT GCC ATGAGTGCTC           ATGTTAATTACCAAT 100 33
JCR18_RS13280 2754093 .. 2754106 -  -8.1  -5.01732   AACCGCCTTAAAAAA               GCACC CTAG GGTGC                TTTTTTCTATCTTAA  91 37
JCR18_RS13270 2752698 .. 2752714 - -12.3   -5.1675   TTAGGTATTAAAAAA              CCCACTC GAT GAGTGGG              TTTTGTTAAGTTGAT 100 45
JCR18_RS13265 2752023 .. 2752038 -  -8.2   -5.4833   CTAGGCAATAAAAAA              CCGCCA TAAA CGGCGG               CAATAAATCGAGACT 100 44
JCR18_RS13255 NONE
JCR18_RS13250 2745804 .. 2745823 -  -8.6   -5.4833   TCAGGTAATAAAAAA            CCGACCTCA TAA TG-GGTCGG            TATAAAAGTATCTTT 100 46
JCR18_RS13245 NONE
JCR18_RS13240 2744882 .. 2744894 -  -3.3   -2.8805   ATGACTTTTCATATA                GCCCC CTT GAGAC                CAGTAAAGCGGTCTA  45 6
JCR18_RS13235 NONE
JCR18_RS13230 2741042 .. 2741058 -  -9.4   -5.4833   TTAGGCAATAAAAAA              GCACCC GAATT GGGTGC              TCAAAGTTCTTTTAA 100 44
JCR18_RS13225 2740604 .. 2740617 -  -9.5  -3.14961   ATTAGTATTAATAGA               CCGCC CGAA GGCGG                CATTAACTGTTCGTA  76 28
JCR18_RS13220 NONE
JCR18_RS13215 2739726 .. 2739741 - -11.8   -5.4833   TTAGGCAATAAAAAA              CCCCGC AAAT GCGGGG               TTTTTCTGATTTTTA 100 45
JCR18_RS13210 2739113 .. 2739139 -  -9.5  -3.35371   TATACGTCGAAGTAA         CTGTGCAGTCT TGAGT AGAATGCACAG         TAAAATTAGGTACTT  78 40
JCR18_RS13205 2738258 .. 2738278 -  -4.1  -4.10164   GTATTATTAGATAAA            TTATTTGAA TAG TTCATATAA            AAAATCTTACATTGA  58 32
JCR18_RS13200 NONE
JCR18_RS13195 2737389 .. 2737419 - -10.6  -3.86835   TGAAATATGAGCAAA      GCAAGACTGTGCT TAATAC AGCACAG-CTTGC       AACAGTTTAAGGCGG  89 41
JCR18_RS13130 NONE
JCR18_RS13125 2728794 .. 2728818 -  -6.5  -3.66178   TTTGTGAATGCGAAA         CCACT-CCTG TTCGCG CAGGTAGTGG          TTTTTAATATCCAAG  64 29
JCR18_RS13120 NONE
JCR18_RS13115 NONE
JCR18_RS13110 NONE
JCR18_RS13105 NONE
JCR18_RS13100 NONE
JCR18_RS13095 NONE
JCR18_RS13090 NONE
JCR18_RS13085 NONE
JCR18_RS13080 2724989 .. 2725013 -  -2.1  -3.18264   TGCGGTATTCAGCAA          TGCTGACTGAT GAC ATCAAGCACCA          CCTTTGAGCACTTGC  44 16
JCR18_RS13075 NONE
JCR18_RS13070 2723746 .. 2723763 -  -6.9  -5.86976   GCACAAAATAAAAAA             GCCCACC GATT GGCGAGC              TCTTAAATTCATTCT 100 102
JCR18_RS13065 2723413 .. 2723442 -  -9.4  -5.17507   AAAATTTAATAAAAA       GCCCCGCCA-ATA ATCGA TATTTAGCGGGGC       CATTTGCGCCGTAAT 100 61
JCR18_RS13060 2722831 .. 2722845 -  -4.2  -5.52023   ACTAGCAATAAAAAA               CCGC TTTAAGG GCGG               TTCATCTAAAATTCA  81 65
JCR18_RS13055 2721976 .. 2721994 - -13.2   -4.7629   TCATCAATTTAAAAA             GCTTGCCT AGT AGGCAAGC             TCCCCCTTTTTTTGA 100 453
JCR18_RS13050 2721265 .. 2721278 -  -9.5  -5.64274   TCACCCATAAAAAAA               CCGCC CTTA GGCGG                TGGCTAAACTCACAG 100 52
JCR18_RS13045 NONE
JCR18_RS13040 2720154 .. 2720169 -    -9  -5.79526   ACATGGCAAAAAAAA              TGAGCC AGAA GGCTCA               ACTTATTAAACATGT 100 23
JCR18_RS13035 NONE
JCR18_RS13030 2718229 .. 2718244 -    -9  -5.54885   AACACCAATAAAAAA              GCACCT AAAA AGGTGC               GTTGTTTAAGACATC 100 31
JCR18_RS13025 2716861 .. 2716872 -  -2.2  -2.71322   TGAAGCCATACATCA                CCTC TACA AAGG                 AGTGTTATCTCGCTC  40 17
JCR18_RS13020 2715714 .. 2715744 -  -2.7  -3.91144   TTCATATTGTATAAA       TTCTGATGTTTTA AAAAA TATAACATAAGAA       AAATTACAGACCCAA  51 29
JCR18_RS13015 2715238 .. 2715252 -  -8.5  -4.64846   CCATAAATGACAAAA               GCGCC ATTTG GGCGC               TTATATAGGTGAAAA  89 84
JCR18_RS13010 2714771 .. 2714784 -  -8.1  -5.40072   CTTCTCGCAAAAAAA               GCACC CGAA GGTGC                TATGGTTAAAAATTA 100 211
JCR18_RS13005 2714528 .. 2714543 -  -8.2   -5.1675   TCAGGCATTAAAAAA              GCGCCC ATTA GGACGC               TTCATTTCTATAAAT  93 43
JCR18_RS13000 NONE
JCR18_RS12995 2712712 .. 2712727 -  -7.5  -4.07746   TCTCCAAAAAGATAA              GGCGG TATTAC CCGCC               TTTTTGTTATTTGAT  77 32
JCR18_RS12990 2712357 .. 2712367 -  -5.4  -2.79291   AAAGCTCATGAATTA                 TTCC TTT GGAA                 TTAATGCTAAAAGTT  53 12
JCR18_RS12985 NONE
JCR18_RS12980 NONE
JCR18_RS12975 NONE
JCR18_RS12970 NONE
JCR18_RS12965 NONE
JCR18_RS12960 2710159 .. 2710173 -  -7.1  -5.77988   ATAGATATAAAAAAA               CCACC GATGA GGTGG               TAGTGAATAAGGCAT 100 80
JCR18_RS12955 NONE
JCR18_RS12950 2708611 .. 2708627 -  -8.7  -5.40474   ATGGGCGTAAAAAAA              CCCGCTA AAA TAGCGAG              TTGTTAAAGTGTTTC 100 29
JCR18_RS12945 2707570 .. 2707603 - -11.9  -3.89614   TCTAATTTTTAGAAA     TAAAAAAGCCCATGG GATT CCATAGGCTTTGTTA      CTGAATAAGTTGATT 100 39
JCR18_RS12940 2706742 .. 2706774 - -13.7  -4.07466   ATGAGATAATAATAA      CCCTAGAGTTATT ATATGTA AATAACTCTAGGG      TTGCTTTTTTGAGGA 100 283
JCR18_RS12935 2706519 .. 2706538 - -10.7  -3.37283   TAAAGTCGGGAAACA            GCGGGTC AATTTA GACCCGC             TTGTTTCAAAATGCT  83 11
JCR18_RS12930 2705999 .. 2706012 -  -8.1  -4.65153   TCACATAAAGGAAAA               CCACC CGAA GGTGG                TCTTTTAAATCAGGC  85 40
JCR18_RS12925 NONE
JCR18_RS12920 2704657 .. 2704670 -  -9.5   -5.4833   CTAGGCAATAAAAAA               CCGCC AAAA GGCGG                TCATTAATCAAAAAT 100 85
JCR18_RS12915 2699709 .. 2699724 -  -6.8   -5.4833   TCAGGTAATAAAAAA              CCACCC CGAA AGGTGG               TTTTATTGATTAACG  93 35
JCR18_RS12910 NONE
JCR18_RS12905 2698787 .. 2698799 -  -3.3   -2.8805   ATGACTTTTCATATA                GCCCC CTT GAGAC                CAGTAAAGCGGTCTA  45 6
JCR18_RS12900 NONE
JCR18_RS12895 2694947 .. 2694963 -  -9.4  -5.60689   TCAGACAATAAAAAA              GCACCC GAATT GGGTGC              TCAAAGTTTTTTTAA 100 44
JCR18_RS12890 2694509 .. 2694522 -  -9.5  -5.76633   TCAGATATAAAAAAA               CCGCC CGAA GGCGG                TATTAACTGTTTTCA 100 28
JCR18_RS12885 2693747 .. 2693778 -  -8.8  -3.43618   AATTAATATCGAGAA      GTTGGCCAAATACTG CAG CTGC-TTTGGCCAAC      CTTAGGTAGTTGGTA  76 187
JCR18_RS12880 2692996 .. 2693006 -    -4  -3.04501   ACCAAGTTTTTAATA                 TTCT TCA AGAA                 CAGCGCAACATTGTA  47 331
        glnA 2686100 .. 2686129 - -16.7  -3.37499   CAACATTCCAAGCAA       TAAAAAAGCCTGC ATAA GCAGGCTTTTTTA        TGAAGTATGTATTAC 100 37
JCR18_RS12855 NONE
        ubiA 2684589 .. 2684606 -  -6.3  -5.80248   TAAGACATAAAAAAA             GTGCTCT GCAT AGAACAC              TTTTCAACCTCACGG 100 50
JCR18_RS12845 2683020 .. 2683039 -  -8.6  -5.31072   ACAATATAACAAAAA            GAGCCTCT ATAA AGAGACTC             TTTTTTAAAACTAAT  95 61
JCR18_RS12840 2682267 .. 2682285 - -10.3  -4.62302   CAAGATTCTTAAAAA             CCCACTC CTTAT GAGTGGG             TTTTTATTTGTATGA  95 503
JCR18_RS12805 2678749 .. 2678785 - -15.5  -3.81414   ACTCCTAATGAACAA    CAATAAAAAAAGCCTCA AAA TGAGGCTTTTTTTATTT    AGGTTTTAACGTCTT 100 31
JCR18_RS12770 2667674 .. 2667687 -  -8.1  -4.48877   TAAACAGCCATAAAA               GCGTC ACTC GACGC                TTTTATTTTTAGGAG  85 469
        sthA 2662184 .. 2662215 -   -11  -5.06816   ATGGTCTAATAAAAA      TAAAAAAGCCCGCA AGTT TGTGGGCTTTTTCA       TGAAAAACTTATTTA 100 44
        rpsB 2655686 .. 2655708 - -15.6  -5.06414   TCTGTTCAACAAAAA           CGGCCCAAAG AAA CTCTGGGCCG           TTTGCACTCTCGACG 100 95
JCR18_RS12720 2654733 .. 2654746 -  -9.5  -5.77988   ACAGAGATAAAAAAA               GCCCC ATAG GGGGC                TTTTTTTGAAGATAC 100 44
JCR18_RS12715 2654152 .. 2654170 -  -4.6  -3.81806   CTACAAAAAAACATA             GCATGTTT TAA AAAGATGC             ATAGAACAAAATTGC  58 69
JCR18_RS12710 2653267 .. 2653284 -  -4.1  -4.63218   TTCGCTTGAACAAAA             TTGCGGT TAGC ACTGCAA              ATAAATTTAAAGATT  65 32
JCR18_RS12705 NONE
JCR18_RS12700 2652133 .. 2652155 - -11.4  -3.67173   ATAAATTTTGAAGAA           GCTGAATCCT AAA AAGATTCAGC           TTTAACTTAATGATT  93 32
JCR18_RS12640 2641430 .. 2641470 - -10.7  -3.91197   TTAGAAATTAGCAAA GAAACCCAAGTTT-ACTC ATTTAG GAGCCAAACTTGGGCTTC  GCTATATTTATTCAT  89 40
JCR18_RS12630 2639145 .. 2639174 - -16.7  -3.09516   GGTTGGAGTAGTTAA       TAAAAAAAGCGCC TTAC GGCGCTTTTTTTA        TATACACAAATTATT 100 36
        adeL NONE
JCR18_RS12605 2631057 .. 2631075 - -10.3  -4.19472   GAATAGATTTTAAAA             TGTCGGC ACTCA GCCGACA             TTTTTCACATCATTA  95 38
        hisQ NONE
JCR18_RS12595 NONE
JCR18_RS12590 2628753 .. 2628804 -  -2.4  -5.35365   AAAATATAATAAAAA GCAACCGAGTATGCTGAGAAGCCTT TTA AAAAATT-TCATCATACTCGGTATC AGCAGCTTATTTTAA  72 32
JCR18_RS12565 2623879 .. 2623896 -  -8.4  -5.26875   TTTCTAATTAAAAAA             CCGAGG CTAAGT CCTCGG              TTTTTTAATACCTCT  93 42
        tsaA 2622017 .. 2622032 -  -6.8  -3.26031   TTTATTCGAAATACA              TGCCGC TATT GCAGCA               GTGATTGTACAAGGT  60 239
        tadA 2618890 .. 2618903 -  -3.1  -3.13066   AATAAAACAATTACA               CCATC GATA GATGA                GGTGAATCTTAAGAA  45 45
JCR18_RS12540 2618432 .. 2618452 -  -8.3  -4.55485   TATAAAAAAAGCAAA            GCCGCAT GATTTAA ATGCGGC            TAAAAGGAATTAATA  85 55
JCR18_RS12535 NONE
JCR18_RS12530 2616340 .. 2616359 - -10.8  -3.03203   AAAACAAAAAATGGA            TAGCATGG GTAA CCATGCTA             TTTTTGTATTTCACG  84 23
JCR18_RS12520 2615046 .. 2615073 -   -10  -3.92963   CAAGAAGCACAACAA        GCATTGAAAGCT TTCT AGCTTTTAATGC         TTTATTTCTTATTAA  87 37
JCR18_RS12505 NONE
JCR18_RS12500 2610366 .. 2610387 -  -3.7  -3.61764   TTAGCAACCTTTAAA           GCTGTCTGGC TTG GTCA-ACAGC           ATCACGAATATGGGG  54 370
JCR18_RS12490 2607613 .. 2607642 - -15.3  -3.07816   TTTTCAGTCAGCCAA       TAAAAAAGGAAGC CAAA GCTTCCTTTTTTA        TATAGGTAGATCTGA 100 42
JCR18_RS12485 2606315 .. 2606332 -    -7  -6.01369   TAAATAATAAAAAAA             GCCTAC TCAAAG GTAGGC              TTTTTTTGAAACTAT 100 43
        pheA 2604020 .. 2604051 -  -6.8  -2.70932   TTTGTTTTTTAAGCA      TAATGACATGC-CCA TCT TGATACATGTCATTA      TTCCAACATGAGTGA  59 41
JCR18_RS12470 2601639 .. 2601666 -  -9.2  -4.73297   TAAGCAATAAACAAA        CAGCAGCCAAGCC TTT AGCTCG-CTGCTG        CCGTTGCTATTGTGT  90 71
JCR18_RS12465 2601147 .. 2601171 - -12.3    -2.569   TAATTTAAAGAAATT          GTACGACTTTT CTA AAAAGCCGTAC          TTCACAAATAAGTCT  89 55
JCR18_RS12460 2599531 .. 2599558 -   -10  -2.58418   TTTCCATATAAAAGT        TTAAGAAGCTCA TAAT TGAGCTTCTTAT         CTCTTAAAAAATTAC  77 37
        yaaA NONE
JCR18_RS12440 2596109 .. 2596119 -    -4  -5.02074   TCACTTTTCAAAAAA                 GATT AAA AATC                 TATATCACTTTATTC  70 75
JCR18_RS12410 2592663 .. 2592686 - -11.8  -5.40464   CATTATAAACAAAAA          CGCCCCAATT CAAA AATTGGAGCG           TCCATGATTCATCAA 100 50
        rhlB 2591428 .. 2591447 - -10.8  -5.96521   ATTAATCAAAAAAAA            TCCCAATC ATTT GATTGGGA             TTTTTTTATTAGCAA 100 34
JCR18_RS12395 NONE
JCR18_RS12390 NONE
JCR18_RS12385 NONE
JCR18_RS12380 NONE
JCR18_RS12375 2586970 .. 2586984 -  -8.6  -2.99458   CAGCACAAAACACCA               TGCTTG ACA CAAGCA               TATTTTGATATGTTA  72 38
JCR18_RS12370 NONE
JCR18_RS12365 2585289 .. 2585306 -  -2.6  -3.35197   CTCCACACATAGCAA             CCTCGC AGACAA GCTAGG              AATTAATAAAAAGGA  44 28
        purF 2583705 .. 2583733 - -16.2   -4.4648   AGTTTCATCATAAAA        GAAAAAAGCGGG AAATA CCCGCTTTTTTC        GGCTATTTCTATTCT 100 34
JCR18_RS12355 NONE
JCR18_RS12350 NONE
JCR18_RS12345 2580003 .. 2580029 -  -5.3  -3.40522   AGGCTTTCACTATAA         CATTGAAAATA GACTA TATTTGCAATG         AAGTGTTATTCATCC  58 42
JCR18_RS12340 2578367 .. 2578377 -  -5.4  -4.35327   TCAGCAAAAATTAAA                 GCTA AAT TAGC                 TTAATCCCCTCTCTT  69 120
        tsaD 2576147 .. 2576158 -  -2.2  -3.79445   AATTATCAATTTAAA                CGAG GCCA CTCA                 ACTTCTTCTTACCAA  51 404
JCR18_RS12310 2572759 .. 2572774 -    -4  -4.51777   ATATGAGAAGCAAAA              TCATGC TTCA GCATAA               TAAGATTCTGGCTGT  62 10
JCR18_RS12305 2571904 .. 2571925 -  -3.1   -3.4277   ATCTAACAGTGACAA           GTGTTTTTT TTTC AAAAAAAAC            TGACCGAGTAATTTG  48 69
JCR18_RS12300 2571759 .. 2571778 -  -5.1   -3.8594   AACATCTATATCAAA            CTTTAAG ACTTAA CTTAAAG             TGGTGGGGGCGAAGA  60 26
JCR18_RS12295 NONE
JCR18_RS12290 2571512 .. 2571529 -  -5.6  -5.71983   TTAATCATAAAAAAA             GCAAGA TCATCG TCTTGC              TTCTTTCTATGGTGG  91 35
JCR18_RS12285 2571364 .. 2571393 - -12.4  -3.71873   GTACTGATATTGAAA       TAAAAAAGCTCC ACAAAA GGAGCTTTTTTA        GAATCTTGGCAGAGG  95 31
JCR18_RS12275 2568902 .. 2568922 -  -6.9  -3.08371   TAGATTTTGAAGATA            GGTCTGT TGACATT ACAGACC            CCGATAAAATGCCTA  62 48
JCR18_RS12270 2567234 .. 2567253 - -10.8  -5.17353   ACAGTCATGAAAAAA            GGGAAAAC GGCT GTTTTCCC             TAATAATAAAAATTA 100 38
JCR18_RS12265 2565704 .. 2565737 -  -9.8  -5.33848   ATTAGAATTAAAAAA     GTAAAAAGCTCCTT TTTATT AAGGAGCTTTTTAT      TTATATCATTAAAAA 100 54
JCR18_RS12255 NONE
JCR18_RS12250 NONE
JCR18_RS12245 NONE
JCR18_RS12240 2561993 .. 2562010 -  -9.9  -5.98781   CATAATGAAAAAAAA             CCACATC GGGT GATGTGG              CAAAAAGGTATAGCT 100 130
JCR18_RS12235 2561427 .. 2561445 -  -6.7  -5.46657   TATTTCAATAAAAAA             GCCCGAA TCTAG TTCGAGC             TTTTTATTTAAAATG  93 46
JCR18_RS12230 2560444 .. 2560479 -  -7.9   -2.7166   TCAAAAAATGAATAT   GTACTATCTTTCCTCTG GAAA CAGAGGAAAGAT--TAC    TTTTTAAATCTTCAG  65 378
        gltS 2555526 .. 2555537 -  -7.2  -5.24531   ATGCCCCATAAAAAA                GCCC TTAC GGGC                 TTTTTTTAATTAAGC  91 35
JCR18_RS12195 NONE
JCR18_RS12190 2553384 .. 2553404 -  -9.1  -4.72277   AAGAATATAAAGAAA            GAGCGATTA TTA TAATCACTC            AACTTAATGGATATT  89 207
       csuAB 2551703 .. 2551730 - -11.4  -4.18018   TCCCTCCATTTAAAA        CAGGTCTACTCA TATT TGAGCAAACCTG         CTACTCAATTAATTA 100 55
        csuA NONE
        csuB NONE
        csuC NONE
        csuD NONE
        csuE 2546228 .. 2546256 - -11.2  -3.54307   AATAGTTTGGTTAAA        GATAAAAGCCCA TGAAC TGAGCTTTTATC        TCCTCTATAAAACAG  87 44
JCR18_RS12135 2542357 .. 2542376 -  -2.2   -4.1822   CTTTAGTTCAATAAA            TTTAGTTA ACCC TCACTAAA             AAGTAATCTAACAAC  54 7
JCR18_RS12130 2541183 .. 2541205 -  -9.9  -3.53814   TAAAATTATAACTAA           GGTGAGGCT TTAAC AACCTCACC           TTTTATTTTTATATC  84 41
JCR18_RS12115 NONE
JCR18_RS12110 NONE
JCR18_RS12105 NONE
JCR18_RS12100 2532989 .. 2533008 - -10.8  -5.74086   AAAGTAAATAAAAAA            GCTCCTTA ACCA TAAGGAGC             TTTAAATTAAACGTA 100 58
JCR18_RS12095 2532023 .. 2532040 -  -3.3  -2.52464   GTTTTTGGCAAGGTA             CAGCCAT GGTC ACGGCGG              GTTCACTGATCTGCT  44 105
JCR18_RS12085 NONE
JCR18_RS12080 2528991 .. 2529014 -    -6  -4.30576   GCTCCATCAGCAAAA          GGGGATGATA AGTT TATCACCACC           GACTATTTGCAACAG  69 18
JCR18_RS12075 2528168 .. 2528182 -  -2.7  -3.08438   CAGGAGATCGGAAGA               CCTCG GCCGT CGCGG               CGCTTGCCGGTGGTG  43 109
JCR18_RS12065 2527068 .. 2527101 - -18.1  -2.62933   TAACGTTTGACATGA     GGGGCGGCCAAGGGC GCCA GCCCTTGGACGTCCC      CCTCGATGGAAGGGT 100 40
JCR18_RS12060 2526355 .. 2526378 - -10.2  -3.45832   TAACGCCAGAATTAA          GCCG-TGCCGC GAA GCGGCGTCGGC          TTGAATGAATTGTTA  84 38
       aadA1 2525499 .. 2525522 -   -16  -3.06133   TAACGCTTGAGTTAA          GCCG-CGCCGC GAA GCGGCGTCGGC          TTGAACGAATTGTTA 100 45
JCR18_RS12050 2525028 .. 2525045 -  -4.7  -3.07233   TCAGAATGCCGAACA             CCGTCAC CATG GCGTCGG              CCTCCGCAGCGACTT  52 11
        sul1 2523982 .. 2524005 - -16.8  -3.22841   AATCACAATACTGAA          GCCCCAACTG TTAT CAGTTGGGGC           TTTTTCTTGTCTGTT 100 218
JCR18_RS12040 2522164 .. 2522185 -  -5.1  -4.07885   GATTTGGCGGTAAAA           TCTCTAGCC TGAT AGCTCGAGA            GATACAAACTGCCCC  62 92
JCR18_RS12030 2519694 .. 2519704 -  -5.4  -4.45175   CAGGAAAAAATGAAA                 TGAC TGA GTCA                 GCCGAGAAGAATTTC  69 401
JCR18_RS12015 2517880 .. 2517908 - -13.3  -6.06723   CCTCCCAAAAAAAAA        GCTATTCATCCAC AGG GTGGACAAATAGC        TAGTCAATTAAGTTA 100 297
      msr(E) NONE
JCR18_RS12005 2515157 .. 2515187 - -13.3  -5.23396   AATAATCAATAAAAA       GCCGTTCTGGTGC CCTAT ACTCCAGAACGGC       TTACGTTAATATAAT 100 204
JCR18_RS11970 2510144 .. 2510154 -  -2.6  -4.38712   TTCATGTTTATAAAA                 TAAT TTA ATTA                 ATTACATCATGCATT  58 318
        mnmG 2493388 .. 2493405 -  -9.1  -5.86976   TCAGAAAATAAAAAA             GCCCAGT CTTA ACCGGGC              TTTTTTACACGCTTA 100 46
JCR18_RS11870 2490254 .. 2490264 -    -4  -2.60075   TCCTCTTTAACCAAC                 CATT AAG AATG                 TAGCGTTTCAACGAC  46 17
JCR18_RS11865 NONE
JCR18_RS11860 2488859 .. 2488872 -  -3.1  -3.12351   TCTCTTTACATTCAA               CAAGC CAGC ACTTG                AACCACAGACATCAT  45 8
JCR18_RS11855 2488070 .. 2488086 - -10.9  -5.68438   TCACTAAATAAAAAA              TCCAAGC ACT GCTTGGA              TTTTTTTTGAATAAA 100 43
JCR18_RS11790 2474307 .. 2474317 -  -5.4  -4.72333   AAGTATAGTTAAAAA                 TGTG ACA CACA                 TCACAATAATCAAAT  71 351
        pgaA NONE
        pgaB NONE
        pgaC 2468483 .. 2468493 -  -5.4  -4.73108   CCCATAAAATTAAAA                 TGAG GCG CTCA                 GACCTATTAACAGAA  71 275
JCR18_RS11740 2463145 .. 2463166 -  -8.1  -4.51378   ATCCATATGATAAAA           GAGACTTTA TTTA TAAAGCCTC            TTTAACCGCTATAGT  85 40
        prfA NONE
        prmC 2460912 .. 2460925 -  -3.1  -2.53876   TTGCAGCTGAACTGA               TTGCG GCCA CACAA                GGGATTGGCTATTTA  42 187
JCR18_RS11710 NONE
JCR18_RS11705 2455845 .. 2455861 -  -8.7  -4.20918   TTCAATTGCAAGAAA              CCGCACA TGG TATGCGG              CTTCTTGCAGTTTTA  87 67
JCR18_RS11700 2454001 .. 2454035 -  -8.8  -4.19624   GATCTTTAATATAAA     GAATAAAGGGAAAT TCTAAAT ATTTCCCTTTGTTC     AAATTAGCTTGCGTA  87 29
JCR18_RS11690 NONE
JCR18_RS11685 2451085 .. 2451099 -  -2.8  -3.63569   TCAAGCCTTCAATAA               TAATGG CAT CCATAA               ATTTAAACTGACCTT  48 39
        folB NONE
JCR18_RS11675 2450221 .. 2450233 -  -6.3  -3.90922   ATTGTCCTGAAATAA                CACTA ATT TAGTG                AATTTCAGTATCGAT  66 115
        kdpA NONE
        kdpB NONE
        kdpC NONE
JCR18_RS11655 NONE
JCR18_RS11650 2442227 .. 2442251 - -11.5  -3.56836   AAACCACTTTGCAAA          CCCTTAGGG AGAAATA CCCTAAGGG          TTTTTTTATATCTCA  90 41
JCR18_RS11640 2439770 .. 2439802 - -10.8  -5.42259   TTATCTTTAAAAAAA      CAAAGGATTGATCT CAAAC AGATCAATCCTTTT      TTAAAATATTATTTT 100 34
JCR18_RS11625 NONE
JCR18_RS11620 2430344 .. 2430363 - -12.2   -5.4756   AACTTCAATAAAAAA            CCGAGATG TTTT CATCTCGG             TTTTTAGTGTTCTTA 100 47
JCR18_RS11615 2429841 .. 2429860 - -12.2  -4.25859   TTTAAGTTAAAAGAA            CACTCCAC CTTA GTGGAGTG             TTTGACGATGTCTTA 100 46
JCR18_RS11610 2426941 .. 2426960 - -12.2  -5.50723   TCATTAAAATAAAAA            GGAGCTGA ATAA TCAGCTCC             TTTTTTGTACTAAAT 100 48
JCR18_RS11605 NONE
JCR18_RS11600 2425167 .. 2425184 -    -7    -4.788   AAAGCAACTCAAAAA             GCCTGA GTATGA TCAGGC              TTTCGTTGAATCTCT  83 39
JCR18_RS11590 2423286 .. 2423309 - -11.8   -4.9725   ATTTTTATATAAAAA          GAAAAAGGCC AAGT GGCCTCTTTC           ATTACCTCATTGTTC 100 32
JCR18_RS11585 2422324 .. 2422341 -  -2.7  -5.80003   CTAACAAATAAAAAA             TAGACCC ATTC AGATCTA              TTTTTTATAAAATGA  79 48
JCR18_RS11580 2421166 .. 2421191 - -11.3  -3.71873   TTATTTATAGGTAAA         TAAAAGGCACC CGAA GGTACCTTTTA          ATAAATGCTTAGGCT  93 53
JCR18_RS11570 2420168 .. 2420180 -  -2.7  -3.11359   TCTTTAAAACGAAAC                CATTA TTT TAACG                TAATTTTAGTGTTTT  43 89
JCR18_RS11565 2419368 .. 2419421 -  -4.7  -2.96329   CCAATCGAATAATCA TGAATCTCACCGCCTCTATGAAA AAATGGGG TTTATTAGAGACAGTGAGTTCCA GACATTTCATTGTTT  51 43
        tsaE 2416994 .. 2417004 -  -2.4  -3.19463   TTCATCAGTCATGAA                 GCTG TTC CTGC                 AAAGTCTGGTATAAA  44 4
        mutL 2415039 .. 2415053 -  -2.1  -3.13773   TTTGACATGTAAAAC               TACTC TCCTC GAGCA               AATAATTTATCTAGT  42 10
        miaA NONE
         hfq 2413449 .. 2413466 -  -9.9  -5.68039   AAAGCCATAAAAAAA             CCAGTCA TCAC TGACTGG              TTTTTTTCAAGCTAA 100 45
JCR18_RS11525 2412466 .. 2412499 -  -9.7  -2.69073   ATTTATAAGAATTTA     GTGGAGTTCAAAAGA ACAG TCTTTTGAACTCCTA      TTTCATAGCTAAGGC  74 23
JCR18_RS11515 2411233 .. 2411245 -  -6.3  -2.80056   ATTATGGATGTAAAT                GAACA AGC TGTTC                TCTCTGCCCTAACAG  55 215
JCR18_RS11500 2408199 .. 2408218 - -12.2  -5.09204   ACACCTGAATAAAAA            GCCCAACT TTAC AGTTGGGC             TTTTTATATTTTCTG 100 94
JCR18_RS11470 2400043 .. 2400056 -  -4.5  -5.01811   GCACCAAACTAAAAA               CCCAC GCAA ATGGG                GACCCGATGCAACTC  76 213
JCR18_RS11455 2395968 .. 2395980 -  -3.5  -2.97109   TTAAGCCAATTAAAC                TTTAT TCA ATAAA                TAATAAAGCTAATCG  45 14
JCR18_RS11450 2395478 .. 2395497 -    -5  -2.94099   GCTTTTGAGTATATA            CAGCCATA CATT TATGTCTG             TTCATTCGATAGCAC  51 94
JCR18_RS11445 2394594 .. 2394621 -  -7.8  -3.39772   TCAAACTTTTAAACA        TACAGGCATAAC CTAA GCTATGTCTGTA         TCACCCTAGACTCAC  71 37
        pepN 2389194 .. 2389220 - -10.2  -6.38655   AAATATAAAAAAAAA         GCGCTACCCCTT TTA AAGAAATAGCGC         TTTGAAAACATGAAT 100 57
JCR18_RS11420 NONE
JCR18_RS11415 2387599 .. 2387609 -  -5.4  -2.78463   ATTGTTTTTAGCATA                 TGAG TCT CTCA                 AAATTTTTCTTGGTA  52 23
JCR18_RS11410 NONE
JCR18_RS11405 2385904 .. 2385920 -  -2.3  -2.79327   GGACTCGACTCAAAC              GTTTAGA AAG TCTAAAA              ATTATTGAAGGCTAT  41 384
JCR18_RS11395 2384751 .. 2384784 -  -9.8  -2.98802   TAGTAAATTTATAGA     CCGATAAAATGAAT AATTAA ATCCATCTTATCGG      CTTGCTAGAAGAGGT  76 58
JCR18_RS11390 2383289 .. 2383314 - -12.7  -2.81413   TAGTAACTAACATTA         TAAAAGCCCCA TTAT CGGGGCTTTTA          TTTTTAGTCTAGGAC 100 34
JCR18_RS11380 2379261 .. 2379291 - -11.4  -4.02953   AAATTATTAAAAAGA       TGCTATCTATTTGA AAA TAAAATAGATAGCA       CGCTAACAGTTGTTT 100 39
JCR18_RS11375 2378549 .. 2378567 -    -4  -3.20382   TTTTATAGTTAGTAA             TAATTTTC TAA AAAAATTA             AGCTCATCAATAATA  49 213
JCR18_RS11370 2377799 .. 2377814 -  -8.2  -5.09259   TATGGCAAAAGAAAA              CCGCCC CAGA AGGCGG               TTGCTGAAATTTTCC  91 83
JCR18_RS11365 NONE
JCR18_RS11360 2376791 .. 2376801 -  -5.4   -3.2327   GTAAGCTACCATGAA                 GCAT TTA ATGC                 CCAAGACTAATTTAG  56 68
JCR18_RS11350 2375145 .. 2375161 -  -5.1  -3.54051   ACAAATTTCACAGAA              CCCTTAT CCT ATCAGGG              TTCTGCCTTCTTAAA  56 1
JCR18_RS11345 2372735 .. 2372748 -  -8.1  -5.73339   AGAATTATAAAAAAA               GCACC CGTA GGTGC                TCTTAAAAAATAACT 100 44
JCR18_RS11340 NONE
JCR18_RS11335 2370997 .. 2371028 -   -14  -2.70315   GACACAGCAAAGTTA      TTTTAAAGCCCATC TAAC GATAGGCTTTAAAA       TTTATAAGAATTAGG 100 36
JCR18_RS11330 2370148 .. 2370164 -  -9.5  -4.53303   TATGCCTATATAAAA              GCTCTAA CTA TTAGAGC              TTTTATATAAATCTT  91 53
JCR18_RS11315 2367286 .. 2367313 - -11.6  -5.38549   TGTAAACAACAAAAA        TATAAATGTGAT AAAT ATCACATTTATA         TTTTATTTAACTTCA 100 28
JCR18_RS11310 2366901 .. 2366920 - -10.8  -2.99074   AAAATATTTAAATTA            CACCTCAT TTGT ATGAGGTG             AGAACTAATTATATT  84 69
JCR18_RS11305 2366048 .. 2366068 -  -6.9    -4.183   CTAATTTTTAACAAA            GCTATCTCA TTG CAAGATAGC            CTCTCCTAAAGGTTA  74 205
JCR18_RS11300 2365777 .. 2365790 -  -5.3  -2.95877   GAAAGGAATAGGAGA               TCGTA GACT TACGA                TGAAGAAGAGAAAAT  53 20
        mgtA 2362902 .. 2362918 -  -2.3  -2.91924   GTATGTTGTAGAAAT              TGCAA TTTCATT TTGCA              CCTATTGTTTTATTG  41 35
JCR18_RS11290 2362133 .. 2362184 - -10.5  -4.06903   AAGGCTTAAACGAAA GAGTTTGCGCTTCATCATTTA-GA GAAAT TCATAAAAAATTAAGCGCAAACTC TCGTTAAATTAATTA  91 34
JCR18_RS11280 2360230 .. 2360259 -    -3  -2.72144   GGATTTGGTTTAAAG      CT-GGCAACTT-CA ACAA TGTAAGCTGCCGAG       TCAAGGAAGTCAGAA  42 53
        aceI 2356946 .. 2356967 - -13.1   -5.1675   TTATCGACCAAAAAA           TAAGCACCC ATCT GGGTGCTTA            TTTCATTTCAATCTA 100 47
JCR18_RS11250 2353693 .. 2353710 -  -9.1   -5.4505   TTCTTGAATAAAAAA             GGGATGC ACAA GCACCCC              TATTTAGCTAAAAGT 100 43
JCR18_RS11245 2352765 .. 2352790 - -11.9  -4.08216   TTATTTTGCTCAAAA         GCAGCCCAAAC CTCT GTTCAGGCTGC          TGCTATTTTTATAAT 100 34
JCR18_RS11240 2351346 .. 2351358 -  -3.4  -3.93583   GAAGGGATTTATAAA                CTTG GTTTA CAAG                GTTTAGTTGAAGAAG  54 135
        amvA 2349182 .. 2349224 -  -8.1  -3.10715   TGGACTATCAGTGAA TTTTAAAGTTTCGA-AGAAA AAGT TTTCTACCGAAACTTTAAAT ACTGTGAAAAATATT  70 39
JCR18_RS11225 2346764 .. 2346775 -  -4.4   -3.8186   ATAAGAATATTTAAA                GGAA GTTG TTCC                 TGTGCATTGCCTTTT  58 188
JCR18_RS11220 2344342 .. 2344378 -   -14  -5.31275   TTTTATTATAAAAAA    TGAGGCAAAAAGAAAA TAAGT TCCTCTTTTTGCCTCA    TCCTAACTTAGATCA 100 33
JCR18_RS11205 2341181 .. 2341199 -  -3.2  -3.18199   CAATCCTCAACTCAA             TCTTGA TTGTCTT TCAAGA             TTGAGTATCTGTAGC  46 102
JCR18_RS11200 2340467 .. 2340478 -    -3  -2.63208   TTGTATTGAAAAACC                TGTT TTTA AACA                 TTCAATTGTTTTTTT  42 19
        murB NONE
JCR18_RS11190 NONE
JCR18_RS11185 2337224 .. 2337251 - -10.6    -4.323   TTTAAATAGTTAAAA        CTGGAGCTGCCT ATAG AGGCAGCTTCAA         ACTTTAATAATAAAA  95 29
JCR18_RS11165 2331602 .. 2331625 - -12.6    -5.243   TAAAGTATTAAAAAA          GCCTATTCAT ATAT ATGAATAGGC           TTTTTAGTTTTTATC 100 68
JCR18_RS11160 2330085 .. 2330098 -  -2.5  -2.82933   GTTTAAGTTAGCACA               TTTTT TTAG AAAAA                CATTGTTTCATAACC  42 142
JCR18_RS11155 2329528 .. 2329545 -  -9.9  -5.36441   GCTTCATATAAAAAA             GCCTCTT AAAT AAGAGGC              TTTTTTATATCTACT 100 44
JCR18_RS11115 NONE
        nirB NONE
        nirD NONE
JCR18_RS11100 NONE
JCR18_RS11095 2315284 .. 2315304 -  -5.5  -4.35682   CTAGAATGAAAATAA            CAAGTTCCA AAA TAGAACTTA            AATTCTAAACAGTCA  69 108
JCR18_RS11090 NONE
        moaA NONE
JCR18_RS11080 NONE
JCR18_RS11075 NONE
JCR18_RS11070 NONE
JCR18_RS11065 2308723 .. 2308754 - -13.4  -4.49781   AAAATAGTTATAAAA      TATAATTAATCCAT CAGT ATGGATTAATTATA       TACAGCTTATTTATA 100 43
JCR18_RS11060 2308036 .. 2308065 - -14.5  -3.40299   TGATTATATTTATAA       GACTCTTGCAGAA GCGC TTCTACAAGAGTC        ATTAGAGAAACAAGT 100 41
JCR18_RS11050 2305600 .. 2305614 -  -8.6  -3.80018   CCCAGATATTAATAA               TGCTGT TTT ACAGCA               AAAATTTAATACCGG  77 106
JCR18_RS11025 NONE
        fumC 2301221 .. 2301237 -  -3.8  -3.79335   AATAAAAAGTAAACA              GTTTTA GCTTT TAAAAC              GCGCCACACTACTCA  56 500
JCR18_RS11005 2299803 .. 2299823 -  -8.4  -5.37345   TTTAATTATAAAAAA            GGTGAATT ATAAG AATTCACC            TTTTGATATTCATTA 100 38
JCR18_RS11000 2298153 .. 2298172 -   -10   -5.8901   ATATAAAATAAAAAA            GCCAGTGC ATAG ACACTGGC             TTTTCTTTTTATGCG 100 34
        ispF 2296789 .. 2296801 -  -6.3  -2.78463   ATTTGCTTCATGAGA                TTTGG GAG CCAAA                TGAAACATGGACAGG  55 128
        rimO NONE
        pyrH NONE
         frr NONE
        uppS NONE
JCR18_RS10930 NONE
JCR18_RS10925 NONE
        rseP NONE
        bamA 2280794 .. 2280816 - -11.4  -4.65895   TTCGTTATGCAAAAA           GATCGTACTT AGA AAGTACGACC           AATTTCAAACTGAAT 100 11
JCR18_RS10910 NONE
        lpxD NONE
        fabZ NONE
        lpxA 2277856 .. 2277897 - -13.3  -2.75986   TTAACAAATAATTTA GTTATAAAAAAGACACTGT TAAA ACAGTGTCTTTTTTATGTC  TTCTTGATTAGCGCA 100 33
         ffs 2276517 .. 2276538 -  -7.4   -3.1149   ATGTAATTTTAAAAG           CAATCCAA AGAAAA TTGGATTG            AAAGAATGGTGGCAA  64 41
JCR18_RS10860 NONE
JCR18_RS10855 NONE
JCR18_RS10850 2272316 .. 2272334 -  -8.2  -3.26319   AAGCTTCCAGATGAA             CATGCCTT ACA AAAGCATG             TTCTTTATGAAATAT  65 115
        kynU NONE
JCR18_RS10830 NONE
JCR18_RS10825 2267332 .. 2267356 -  -9.3  -5.98675   TACAAAAATAAAAAA          GTCCGCATCTT GGG AAGCTACGGAC          TATAAACTCATCTAA 100 413
JCR18_RS10820 2265295 .. 2265308 -  -8.1  -5.63857   AAAAATTTAAAAAAA               GGTCC TTCG GGACC                TTTTCAATCATAGAG 100 54
JCR18_RS10805 2261130 .. 2261147 - -11.3  -5.36441   CCTTTATATAAAAAA             CCCAGCT ATAT AGCTGGG              TTTTTTGAAATAAGT 100 40
JCR18_RS10755 2248560 .. 2248577 -  -8.5  -4.70626   TAAGAATTCTAAAAA             TGGATGA GCGA TCATCCA              TTTTTATTTGCTTAA  89 29
         map 2244950 .. 2244968 - -10.4  -5.38951   AAGCCACATAAAAAA             GTTCGATA GAT TATCGAAC             TTTTTTTATGCATAT 100 40
JCR18_RS10725 2243425 .. 2243442 -  -9.9  -5.64873   CTTAATAATAAAAAA             GCCAATC GAAA GATTGGC              TTTTTTATACTTATA 100 44
JCR18_RS10715 2241596 .. 2241624 - -14.8  -5.19879   GGCTAAATACAAAAA        TAAAAATGGGCG ATTAA CGCCCATTTTTA        TTGTTTTTAAACTTA 100 38
JCR18_RS10695 2239251 .. 2239284 - -10.5  -4.22338   AGCACAAGGTCAAAA     TCCAGTAAGGCTA TTATTCTT TAACCTTACTGGA      TGACAATTGCTAGCC  95 35
JCR18_RS10690 2238864 .. 2238876 -    -2  -4.02911   TTGAAATAAAGACAA                TACT TATTG AGTA                TCTTCTTGCGCTAAT  52 16
        ftsY 2237611 .. 2237628 -    -7  -5.72616   ATGGATATAAAAAAA             CCTCAC TATTTT GTGAGG              TTTTTCTTAAGTCTT 100 50
JCR18_RS10680 2236832 .. 2236850 -  -9.6  -5.77632   AAAAGCATAAAAAAA             GAGTACCC TCT AGGTACTC             TTTTCATCCACTCAA 100 42
JCR18_RS10675 2235932 .. 2235956 - -11.6  -4.69464   AAAATATTCTAAAAA          TAAAGCCGAT ATTAA ATCGGCTTTA          TTTTGAATAGCAATT 100 39
JCR18_RS10670 2235368 .. 2235385 - -11.3  -5.33026   TAACCTAAACAAAAA             GGACCTC ATTT GAGGTCC              TTTTTCATTTCGATT 100 13
JCR18_RS10640 2230695 .. 2230711 -  -3.7  -3.94853   TAATTGAATATTAAA              CCAACCA TTT TAGTTAG              AAATAAAAAATACTT  54 165
JCR18_RS10620 2226273 .. 2226291 -  -8.9  -5.73978   ACGACAAATAAAAAA             GCTCATC GAAAT GATGAGC             TTTTTAGAGTTTTTT 100 44
JCR18_RS10615 2223070 .. 2223099 -  -5.1  -3.57971   ATACTTAGCTGTAAA       GATGTGCGTTCAAA TTG TCTGAACGC-CATG       TTCATCTCCAATTTT  58 45
JCR18_RS10610 2221914 .. 2221930 -  -9.4   -5.4505   TTGGTTAATAAAAAA              GCCGCT GTAAA AGCGGC              ATTTTATAGGTCAAA 100 42
        rpiA NONE
JCR18_RS10585 2216607 .. 2216618 -  -4.4  -3.19371   ATTTACTTAACTCAA                GTTC ATCC GAAC                 CTAACAATTCAACAC  51 162
JCR18_RS10575 2213951 .. 2213980 - -13.9  -3.13566   AGATCAGAGTCAAGA       CACACATTTAAAT CGAA ATTTAAATGTGTG        TGAAGCAAAAAAGAG 100 45
JCR18_RS10570 NONE
        clpS NONE
        clpA 2210461 .. 2210471 -  -2.4  -3.69943   ATTAACATAAATTAA                 GCTG GTT CTGC                 CGTATGGTGATCTTC  48 11
JCR18_RS10555 2209838 .. 2209860 - -13.5  -5.75599   TAAAGCATAAAAAAA           CCTGATCGG GGTTG CCGATCAGG           TATTAACTGTGATGG 100 256
JCR18_RS10550 2208568 .. 2208587 -  -8.6  -6.06723   CTTCTTAAAAAAAAA            GGATCTGC TAAA ACAGATCC             CTTTTTAAATGTTTA 100 46
JCR18_RS10535 2204929 .. 2204944 -  -2.5   -3.0082   AAGCCATTAAAGAAC              CGCTG CTAGTT CAGCA               CCTTGTCGAATAGCA  43 1
JCR18_RS10530 NONE
JCR18_RS10525 2203653 .. 2203666 -  -3.9  -3.98658   ATTTTATTAAAAACA               GATAT GCCC ATATC                CAATAACTACCTATG  58 42
JCR18_RS10520 2202528 .. 2202550 -  -7.8  -5.42265   TTAAAGTATAAAAAA           TAAAGCCC GAGATCT GGGCTTTA           TTTATATTCAAAGAT 100 44
JCR18_RS10505 NONE
        kdsA NONE
         eno 2196774 .. 2196802 - -16.3  -5.64421   AGGGTAAATAAAAAA        GTGCTATTTCTAA CAC TTAGAAATAGCAC        TTATATTTAGATATT 100 85
        ftsB NONE
JCR18_RS10480 2194282 .. 2194292 -    -4   -3.9279   ATTCAATCTTACAAA                 TACA AGT TGTA                 AAAAAATACTAATTA  56 122
JCR18_RS10475 NONE
JCR18_RS10470 NONE
        pcaF NONE
JCR18_RS10460 NONE
        pcaD 2189325 .. 2189336 -    -3  -2.90615   ATTCCTTTTAAATTA                CTAA GCGA TTAG                 ATTTGCTGAATAAAT  43 22
JCR18_RS10450 NONE
        pcaC NONE
        pcaH NONE
        pcaG NONE
JCR18_RS10430 NONE
JCR18_RS10425 2183728 .. 2183747 -  -8.5  -2.71712   TGTCTTTTCTGAAAT            GCGCCCC TGTTTT GAGGCGC             CTTATTTTTTGTTAT  69 37
JCR18_RS10420 2182339 .. 2182373 -    -5  -2.75535   CGAATAGTTCAAGCA     TTTTGGCCAGTTAAAC TAT GTCTAACCAGCCATCA     ATATTATTAAAAATT  50 32
JCR18_RS10415 2179830 .. 2179863 -  -6.8  -5.92337   AGATATTAAAAAAAA     TAAGGGCAAAAGAA AATTTA TCCTTTTGCCCTCT      TTCATTATTTCTCTA 100 30
JCR18_RS10410 2178744 .. 2178761 -  -7.7  -5.29445   TCTTAACAAGAAAAA             GCCCCAA GATT TTGAGGC              TTTTATCATTAAATT  91 34
JCR18_RS10405 NONE
JCR18_RS10400 NONE
JCR18_RS10395 2176585 .. 2176599 -  -4.3  -4.10566   AGCCAAGAAGAACAA               TTGGA CTGGC TCCAA               AAATATCCGCTTCAG  61 358
JCR18_RS10380 NONE
JCR18_RS10375 NONE
JCR18_RS10370 NONE
JCR18_RS10365 2171152 .. 2171175 -   -14  -5.29846   AATTCTAAATAAAAA          TTACCCCCTA ATTT TAGGGGGTAA           TTTTTTATCCTAATT 100 30
JCR18_RS10345 2166286 .. 2166304 -  -4.6  -2.52543   ACTCCTTGTAATTTA             TTGCATTG CAT CAACACAA             AATTTAGCTATTGCA  48 4
JCR18_RS10340 NONE
JCR18_RS10335 NONE
JCR18_RS10330 NONE
JCR18_RS10325 NONE
JCR18_RS10320 2162381 .. 2162392 -  -2.2  -2.71101   CTCCTAAAGAATGTA                GCTA ATAC CAGC                 CAAGGTATCGGTTGA  40 2
JCR18_RS10315 NONE
JCR18_RS10310 2160633 .. 2160644 -    -3  -2.64107   TAAATCGCGAGAGCA                TTAG ATAT CTAA                 AACTAATCTCGGTGT  42 14
JCR18_RS10305 2159594 .. 2159620 -  -9.6  -3.98913   GCTAGATGTAAAGAA         GCTGATAAATCA ATT CAATTTATCAGC         TTAATGGGGCTTATG  86 36
        feaR 2158333 .. 2158343 -  -5.4  -2.71731   TCTATCCCTGAACTA                 TCTG AAT CAGA                 CAGTTAAAATGCACT  52 200
        tynA 2155873 .. 2155885 -  -4.1  -4.24562   AAAAAATGAGACAAA                GAAAG TCC CTCTC                ATAACCTGAGAAAAT  60 134
JCR18_RS10290 2154630 .. 2154641 -    -3  -2.94888   AATTCATTTAAAGGA                TCTA TTAA TAGA                 TGTATTGCAAAATTA  43 18
JCR18_RS10285 2153074 .. 2153106 -  -9.3  -2.79831   TTTATGTTAAAAGAC      TGAGGTTTGTTATTT ATA AAATGACAAACCTCT      TTATTAGTTTAATAC  73 34
JCR18_RS10240 NONE
JCR18_RS10235 2141981 .. 2142011 -  -5.4   -4.9218   TATGTATTAGAAAAA       GCCTGCTGACTCCA AAT TAAAGTGATCAGGC       TTTTTATGTATAAAT  74 40
        abaQ NONE
JCR18_RS10215 NONE
JCR18_RS10210 2135328 .. 2135346 -  -8.9  -4.77438   ATTGACTATGAAAAA             GAGACCA TCATC TGGTCTC             TTTTTATTCTTAGAT  93 35
JCR18_RS10205 NONE
JCR18_RS10200 NONE
JCR18_RS10195 NONE
JCR18_RS10190 NONE
JCR18_RS10185 2131206 .. 2131216 -  -2.4  -2.89323   AAAACGTTTTATATA                 GGCG CAG CGCT                 ATGACCGCCATCGAC  42 8
JCR18_RS10180 2129170 .. 2129186 -  -6.5  -2.63079   TCCTCACACAATTTA              GCAACTG ATT CAGATGC              TTACATGAGTCAATG  57 131
JCR18_RS10175 NONE
JCR18_RS10170 NONE
        actP 2125385 .. 2125432 -  -8.9  -5.75538   GTCAAAAAATAAAAA CTGA--AAGTAAAAAAGACCAGT TAAT ACTGGTCTTTTTTACTTAATAAG TCCAAATTATTATTA 100 122
JCR18_RS10145 2120637 .. 2120658 - -10.1   -5.1963   TCGAATCAATAAAAA           GGGCAGTCA ATTT TGGCTGCCC            TCTTTTTTAAACTTA 100 38
JCR18_RS10140 2118613 .. 2118647 -   -13  -3.76749   AAAAATAATTTTAAA     GAGCCCTTTCTACTTA TTA TAAGAAGAAAGGGCTA     CGATTATTTCTACCA 100 452
JCR18_RS10120 2114650 .. 2114667 -  -5.5  -5.08824   TTTTTATGTAAAAAA             GAGGCCT TCAG ATGCCTC              TTTTTTTAAAGTTTA  76 90
JCR18_RS10115 NONE
JCR18_RS10110 2112138 .. 2112192 -  -6.1  -3.53811   TGTATTCTTTTGAAA TATTTATAAAT-TCCCCGAACAAGAA TGAC TCCTTATTCGGGACGATCTATAAACA TGCTGTTTTAATAAA  62 46
JCR18_RS10105 2111388 .. 2111414 -  -8.1  -5.24449   CATAAATTTAAAAAA         CGAATTACAGA ATTAA TCAGTAATTCG         TTTTTTTATATACAT  93 54
JCR18_RS10095 2109963 .. 2109999 -  -8.1  -4.19817   TCCATTTATTTAAAA    CCCTAAAAGCAAGCC CATCGCT GTTTTGCTTTTAGGG    TTTATATTTGAATCA  83 46
JCR18_RS10060 2103768 .. 2103784 -  -5.9  -3.32268   TAAAATCCATATTAA              TGAGACA CAC TATCTCA              AAAATGACTTAATCT  59 90
JCR18_RS10055 2102182 .. 2102207 - -13.5   -4.6645   TATAGATATACAAAA         GAATCTAAAGG AATA CCTTTAGATTC          TTGTCATTATTTTAC 100 37
JCR18_RS10050 2100063 .. 2100077 -  -4.3  -5.27923   CAATTTTACAAAAAA               GAATC GACCG GATTC               CTTATAGCCATGAGT  77 93
JCR18_RS10035 2096076 .. 2096087 -    -3   -3.0119   AGTTAACATCACATA                TACA GAAT TGTA                 CGTATAAGAACTTTA  45 255
JCR18_RS10030 NONE
JCR18_RS10025 2087881 .. 2087891 -  -5.4  -2.77167   CAATAACCTTAATGA                 CCAA AAA TTGG                 AGCTACTTCAATTTT  52 8
JCR18_RS10020 2087303 .. 2087338 - -12.2   -3.2404   ATAAACAGGTAGCAA    TTAAAAAAACCAGC TAAGTAGC GCTGGTTTTTTTAA     TTATATATCTAATCT  90 77
JCR18_RS10015 2086809 .. 2086826 -  -7.7  -5.46657   TACTCCAACAAAAAA             GCCCATC TTCC GATGAGC              TTTTTATTTAATTAA 100 55
JCR18_RS09995 2082243 .. 2082253 -  -3.2   -2.5507   GCATTCAAGGAATAG                 CCGA TGC TCGA                 TTTATGGGGTAATGA  42 130
JCR18_RS09985 2079515 .. 2079533 -  -5.2  -3.37245   TTACCTGAATATGAA             GTCGCGAT TAA ATCGCACC             CCCAGCATATCGCAG  54 239
JCR18_RS09975 NONE
JCR18_RS09970 2077645 .. 2077684 -  -6.5  -2.76362   TAAAATATTAAACAT  GGCCTCATTATTGGTAG GCTTTA CGACTAACAATGAGACC   TATATTAATTTCAAT  57 53
JCR18_RS09965 2076761 .. 2076780 -  -7.8  -4.63952   AGTATAAATAAGAAA            GGGGCTAA ATCA TGAGCCCC             TTCTTGACATTAAAT  82 55
JCR18_RS09950 2073423 .. 2073456 -  -2.5  -2.92425   AATTAACTTTAGATA     GGCTAACGAAGCTCAA TCA TTGA-CTTCGCTAGTT     CCCTTTCTGTTTGAA  42 56
JCR18_RS09945 2072029 .. 2072051 -  -5.6  -4.83243   CTCAGATAAAAGAAA           GCCACTTC TGATATT AAAGTGGC           TGTAATTACATTAAA  74 36
JCR18_RS09940 2071644 .. 2071656 -  -6.3   -3.1706   AATTTACCTTACCAA                GACTA TAG TAGTC                AGTAAGCACAATAAT  59 181
JCR18_RS09935 2066622 .. 2066640 -  -8.9  -5.57396   ATAATTAAGAAAAAA             GAGACCA TTCAC TGGTCTC             TTTTTAGTTTCTATG 100 56
JCR18_RS09920 2063067 .. 2063097 - -14.3  -5.10497   AAGCGATCTAAAAAA       TAAAAAGAGACCA CAAGT TGGTCTCTTTTTA       CTTCTACATTTAGGT 100 69
JCR18_RS09900 2057337 .. 2057362 -  -7.6  -4.27316   TCTTTTAATTTAAAA         GCCCCAAGTC TTCTAT AACTTGAGGC          TGAGGACTTTACTTA  80 34
JCR18_RS09895 2056174 .. 2056188 -  -2.8  -2.55847   AACTCTCACATGAAT               TGGC GATCACT GCCA               TTAATTTTGGGTATC  40 26
JCR18_RS09890 NONE
JCR18_RS09885 2053856 .. 2053890 - -11.6  -5.67967   AGTACCAGAAAAAAA     GCGGTACTTGATTA TGTCTAT TCATCAAGTACCGC     TAAAATTAAAGCAAT 100 42
JCR18_RS09875 NONE
JCR18_RS09870 NONE
JCR18_RS09865 2050312 .. 2050355 - -15.6  -3.85539   CACATTGATATTAAA TCTTTGAGCTGTACACACTA CGCA TAGTATGCACAGCTCAAATA ATGTCTGAATTAATC 100 35
JCR18_RS09860 NONE
JCR18_RS09855 NONE
JCR18_RS09850 NONE
JCR18_RS09845 2046414 .. 2046430 -  -2.3  -4.81814   ATGACCATAATAAAA              GTGAA CGGACTT TTCAC              CGCTGGTTTAAGACA  64 245
JCR18_RS09835 2044812 .. 2044838 - -12.5   -3.1505   ATGACCTTCGATGAA         TATATAGTGGC ACAAA GCCACTATATA         TTTCAAGTCTAATTT  90 146
JCR18_RS09830 NONE
JCR18_RS09825 2042349 .. 2042378 - -12.9  -3.24146   CCTCTCAATGAAAAT       GATGAGCCGATAC TCAT GCAACGGCTCATC        TAAACTCAGTTATGC 100 35
JCR18_RS09820 2041545 .. 2041560 -  -3.2  -4.63479   CATTATAAATCAAAA              GTGCAT TAAG ATGCGC               TAGTCAGAAAGCTCA  62 25
JCR18_RS09815 2039777 .. 2039791 -   -10  -3.08135   TTTAAACAATGAAAC               CCACTC ATT GAGTGG               TTTTTTTATTACTAA  81 326
JCR18_RS09810 2039196 .. 2039207 -    -3  -2.77416   ATTATTAAGACACTA                TTGA TTTT TCAA                 TCTTTTATCATGACC  42 11
JCR18_RS09805 2038848 .. 2038865 -  -6.9  -5.56264   TTCAAATATAAAAAA             GCCCACC TTTT GGCGAGC              TTTAATACCAGTGCT 100 94
JCR18_RS09800 2038006 .. 2038023 -  -5.5  -5.19819   AAAGAAAAGTAAAAA             GCCCACC AAAT GATGAGC              ATTTTGAAAATTAAT  80 36
JCR18_RS09795 2037180 .. 2037190 -  -6.8  -4.95484   TAGCACGAAAGAAAA                 CCTC TCG GAGG                 AGGCTAAACTCTTTA  85 84
JCR18_RS09790 2036059 .. 2036069 -    -4  -3.21436   AACTGACATTAAAAT                 TACT ATA AGTA                 TTAGTCTCACGTATC  49 228
JCR18_RS09785 NONE
JCR18_RS09780 2035470 .. 2035496 -  -2.3  -3.17146   TCTTTTTATAACATA         TAAAAACTCAC TATTC GGGAGCTCTTA         AGTTAAAAATTGATA  42 28
JCR18_RS09775 2035033 .. 2035054 - -10.9  -4.17002   TACGAAATTAAAGAA           CCCGCTTCT AATC AGAAACGGG            CCATAAAAAAACAAA 100 103
JCR18_RS09770 2034318 .. 2034347 -  -9.4  -3.47187   TATTATAAAACAAAT       GCCCCGCCA-ATA ATCGA TATTTAGCGGGGC       TTCTTGAAGCTTATA  80 45
JCR18_RS09765 2033455 .. 2033465 -  -2.6  -3.36749   GAGCTTTAACATTAA                 TTTA AAT TAAA                 ATTACTTCAACTCAT  44 27
JCR18_RS09760 2033070 .. 2033092 -  -7.8  -4.19276   GTAAAACCCTGAAAA           CTCAAGGCTT TGA AAGCCTTAAA           TACATAAAAATAAAT  80 55
JCR18_RS09755 NONE
        iaaH 2030267 .. 2030282 -  -3.4  -3.82519   ATCACTTAGAAAATA              TAATTT TTCA AAATTA               TTAAATAGCCTTTTA  54 350
JCR18_RS09745 NONE
JCR18_RS09740 NONE
JCR18_RS09735 NONE
JCR18_RS09730 NONE
JCR18_RS09725 NONE
JCR18_RS09720 2022230 .. 2022243 -  -8.1  -5.33331   TAAATATAACAAAAA               CCCAC TTTC GTGGG                CTTCATTAAAATTAC 100 54
JCR18_RS09715 2021144 .. 2021164 -  -2.5   -4.3534   GCCCAAGGAGTAAAA            CCAATAAAC AAC GTTTCATGG            TCTTGCTCCTTACTT  58 35
JCR18_RS09695 2018093 .. 2018112 -  -5.8  -4.61199   AGTTTACACACAAAA            CTATTCCT CAGA AGGAATAA             ATTCTGATGCGGAGT  74 317
JCR18_RS09690 2016970 .. 2016982 -  -9.1   -3.3487   ATTTAATTAAATATA                CCCCA GCT TGGGG                TGTTTGTGGGATAAA  77 163
JCR18_RS09685 2015765 .. 2015785 - -11.2  -5.30686   AATACTCATAAAAAA            GCCTCATC GTGGG GATGAGGC            TAGTATGTGTAAAGT 100 67
JCR18_RS09680 2015020 .. 2015037 -  -9.1  -4.59424   AAATTTAAATGAAAA             GCCCCGA ATAT TCAGGGC              TTTTTAAATTGCTTT  90 252
JCR18_RS09665 2012868 .. 2012891 -  -5.3  -4.12942   TTAAATCTTTTAAAA          CACGGATGT TTTGAT ATATCCGTG           TTTATTTAATTAGCA  64 92
JCR18_RS09645 2008924 .. 2008950 - -13.2  -4.26188   TGTATAGACTTAAAA         GGTAGAACCTAT AGT ATAAGTTCTACC         TTAACTCATTCATTT 100 21
        adeA NONE
        adeB 2001423 .. 2001454 - -16.8  -3.29471   TTTTGAGCATATGAA      GCATCAGAGGAAAT TGGT ATTTCCCCTGATGC       ATTGAACTTAAGATG 100 33
        adeC 1999590 .. 1999611 -  -5.9  -3.86015   GAGGTTTCCTATAAA           GCCATGGCTG GGC CAAC-ATGGC           GGAATGAAGTATGTG  63 402
JCR18_RS09590 1993586 .. 1993612 -  -8.8  -3.62224   ATATTGCTTTAACAA         TTACACCATGTC AAT GACACTGTGTAA         TTTTAGATTAAAATT  77 175
JCR18_RS09585 NONE
JCR18_RS09580 NONE
JCR18_RS09575 1990148 .. 1990173 -  -3.3  -2.55267   AAATATTTTAAGCTA         CCAGTTATAAA GTAG TTTTTAGCTGG          ATTAAACTGGACGCC  44 53
JCR18_RS09570 1988697 .. 1988717 -  -3.4  -4.87592   GTAGAGATAAGAAAA            TTACATAA GGCTA CTATGTAA            CTGGAAAAGAATTAA  66 247
JCR18_RS09565 1987876 .. 1987905 - -11.5  -4.53705   AAGTGCTACACAAAA       CAGGGTTCCCATG CGGA CATAGAAACCCCG        CTATCAATTAATTAT 100 37
JCR18_RS09555 1985897 .. 1985907 -  -2.6   -3.9993   AATTTATTAAAAAGA                 TAAT CTG ATTA                 CTGAAGTTTTATTTG  53 23
JCR18_RS09550 NONE
JCR18_RS09545 1982263 .. 1982292 - -13.9  -4.60487   TATTAGGTTTAAAAA       CTATTGAATATGA TTAA TCATATTCAATAG        TTACAGTAGCCATTG 100 9
JCR18_RS09540 1981170 .. 1981186 -  -9.4  -5.74086   AAATGAAATAAAAAA              GGGCTG TGATT CAGCCC              TTTTTATGACTTATA 100 51
JCR18_RS09525 1976562 .. 1976586 -  -2.9  -4.07306   ATACTGAACTATAAA          GAACTGC TTTGGTTATTG GCAGTTC          TTTTATACTTAAATT  55 39
JCR18_RS09510 1972568 .. 1972580 -  -2.6  -4.10552   GCGTATCAAATTAAA                CGCC TAAAG GGCA                ATGCTTCAGATAAGT  55 330
JCR18_RS09460 1962116 .. 1962142 - -13.2  -4.86033   AAACTGTTATAAAAA         TAAAGGACAGCA TCA TACTGTCCTTTA         TGCATTCTTAAATGA 100 42
        antA NONE
        antB NONE
        antC 1953437 .. 1953467 - -11.4  -4.81851   ACTTAAATGCAAAAA       TTCAATATACCCCT TAT AAGAGTATATTGAA       TCATTTCAGGTTTAG 100 64
JCR18_RS09405 1951964 .. 1951991 - -10.8  -5.97575   AAGTCATAAAAAAAA        GCCTTTTATATC AACA AATATAAAAGGC         TTTTATCTATTTTTT 100 44
JCR18_RS09375 1945343 .. 1945364 - -10.3  -5.95539   TTCCAAATAAAAAAA           CTGATTTAG GCAA CTAAATCAG            TTTTTTATTTATCGA 100 48
JCR18_RS09365 1942858 .. 1942874 -  -5.1  -3.54051   ACAAATTTCACAGAA              CCCTTAT CCT ATCAGGG              TTCTGCCTTCTTAAA  56 1
JCR18_RS09345 1938416 .. 1938432 -  -3.8  -4.01737   ATGAATAATATCAAA              TTAAGT ACAAA ACTTAA              GACGCATATAAGCTA  58 143
JCR18_RS09340 NONE
JCR18_RS09335 1936877 .. 1936889 -  -4.8   -3.0094   TCTTATTTATAGACA                GCAC ATCCG GTGC                TTGATAGGGCTAAGA  52 93
JCR18_RS09330 1935398 .. 1935423 -  -2.5  -2.73124   GTGTATTTGCTAAAT         TTGCCTTTAGC CTAA ACTAAAGGCGC          CACTAAATTAAAAAG  40 33
JCR18_RS09325 1934146 .. 1934185 - -13.2  -2.75229   TAAAAGTTTTAATTA  TAAAAAGAAGATGTAAGA AAAT CCTTACATCTTCTTTTAA   TTTTAAATTAAATTT 100 33
JCR18_RS09300 1928949 .. 1928989 - -23.1  -3.36518   TTAAAAGTTGTAGAA  GAAATAAAAAAAGGAGCTT TAT AAGCTCCTTTTTTTATTTC  AGGAATTAAGCCGAC 100 31
JCR18_RS09290 1924891 .. 1924919 -   -14  -4.28254   TGCTAAGAGCTAAAA        GATGCCTTCTGC TTGGG ACAGAAGGCATC        TCATTTAATTAATGA 100 34
        chrA 1916014 .. 1916039 - -13.4  -3.87576   TTAAAAATATAAATA         GCCGAACAGT AAAGGA ACTGTTCGGC          CTTATTGAGATTATG 100 72
JCR18_RS09235 1914734 .. 1914746 -  -5.5  -3.15346   AACAGTCCATGAATA                TGGCG CCT CACCA                ATATGTCATGCAAAG  54 182
JCR18_RS09225 1912960 .. 1912977 -  -8.4  -5.64274   TGATTTATAAAAAAA             GCAGGC TTTTAT GCCTGC              TTCTCACAATTTTTT 100 16
JCR18_RS09200 1906922 .. 1906935 -  -3.1  -2.62735   ATACGCTTTAGACGA               GCTAA ATAC CTAGC                TAAAGCTTATGTTTT  42 25
JCR18_RS09195 1905931 .. 1905946 -    -9  -5.27923   TAAGCCTATAAAAAA              GAGCGA ATCA TCGCTC               TTTTTTATTAAAGTA  95 33
        lipA NONE
JCR18_RS09155 1896380 .. 1896404 - -11.6  -4.62336   ATCTCATCTTAAAAA          GGGAGAATAT TCTAC ATATTCTCCC          TTTTATTTTATTCAA 100 33
JCR18_RS09145 1893993 .. 1894016 -  -9.7  -4.66609   CAGCGTATTTAAAAA          GCCACATAA ACAAAA TTATGTGGC           TTTTCTATTTTTATT  93 72
JCR18_RS09105 1886955 .. 1886992 - -13.8  -3.33315   TTAACATGTTGATAA   GATACTTCTTTAGTCA TAGAGC TAACTAAAGAAGTATC    CAGTGGTAGTTTTAA 100 37
JCR18_RS09065 1880206 .. 1880222 -  -9.4  -4.53705   AAGCGTTAGATAAAA              GCCCTC ATATA GAGGGC              TTTTTTATGCCTAAA  91 42
JCR18_RS09035 NONE
JCR18_RS09030 1876185 .. 1876202 - -11.3  -5.95539   TTTTAAATAAAAAAA             GCGGAGT TTAA ACTCCGC              TTTTATCTCTTAAAA 100 41
JCR18_RS09025 1874772 .. 1874791 - -10.8  -4.13343   ATAAATTTTTTAAAA            GCCGATAT AAAA ATATCGGC             TTTTTTGATAGCACA  93 91
JCR18_RS09010 1872661 .. 1872678 -  -7.7  -4.76041   TATATTGATTAAAAA             GCCCCAT TTTT ATGAGGC              TTTTTTAAATCGACT  87 40
JCR18_RS08985 1866808 .. 1866818 -  -3.2  -3.35046   TTATTTCTGGAAATA                 CAGA AGA TCCG                 GTTCAAGCCATTTTG  48 55
JCR18_RS08975 1863285 .. 1863314 -  -7.9  -6.12458   TAAAAAAATAAAAAA       GAAAGCCAACCCCA AAT TGGGATTGGCTA-C       GCTATTAATATTTAA 100 30
JCR18_RS08970 NONE
JCR18_RS08965 NONE
JCR18_RS08960 1861068 .. 1861093 -  -4.8  -5.81412   CTTATGCAAAAAAAA         GCTAAGCA ATCAAAATCA TGCTTAGC          TTGAGGAAATTTTAT  90 41
JCR18_RS08950 1858842 .. 1858860 - -10.3  -5.92399   CAATAAAATAAAAAA             GCCCTCA AAAAA TGAGGGC             TTAATTTTCAATCTC 100 52
JCR18_RS08845 1834161 .. 1834176 -  -2.6  -3.10597   CTGGTGATCTAAAAT              TGTAAC GAAT ATTACA               TGTTTTGAACGTATT  43 195
JCR18_RS08840 1832706 .. 1832718 -  -3.4   -3.4252   TTGGATTGACTAGAA                TGAC ACGGA GTCA                TTCTAGTCTTAATAA  50 43
JCR18_RS08835 NONE
JCR18_RS08830 1829963 .. 1829988 - -12.7  -4.61231   TCATAGTGCTAAAAA         GCAAGGAAGTT AAAA AACTCCCTTGC          AATATTTCTATTTTA 100 33
JCR18_RS08820 1827488 .. 1827515 - -14.4  -3.13591   ATAAAATCTATGTAA        TAAAAAAAGCGC TTCG GCGCTTTTTTTA         TTATTCATCGAGATT 100 26
JCR18_RS08800 1823658 .. 1823676 -    -6  -2.50113   TAGGATTTTATGAAT             CCCGACTA AAA TAGTCAAG             TTTTTTTATTTTTAA  54 73
JCR18_RS08795 NONE
JCR18_RS08790 1821906 .. 1821926 -    -7  -4.12456   ATATGAGGGTTAAAA            CACTAATT TCAAT AATTAGTG            TTCTGCCCATTCAAC  71 20
        iscU NONE
        iscA 1821060 .. 1821096 -    -9  -3.57915   CACATTAATTAAATA    CATTAAAACAGTGC TGTTAAAAG GCACTGTTTTAATA    AGAAAAAGGAAAGGA  80 46
        hscB NONE
        hscA NONE
         fdx 1818229 .. 1818242 -  -8.1  -5.76237   TATATAAATAAAAAA               GCTGC CTAA GCAGC                TTTTTTTATTATTTA 100 41
        rpsT 1808431 .. 1808458 - -14.4  -3.78699   CAAAAACATAGACAA        TAAAAAAAGCCC TGTT GGGCTTTTTTTA         CATGCTTCAATTAGT 100 36
JCR18_RS08705 1805598 .. 1805608 -  -2.6  -4.00042   CTCGTCATGAAACAA                 TTTT CCA AAAA                 CCGAGTTTTCAAGAA  55 502
JCR18_RS08665 1795151 .. 1795166 -  -6.2  -5.01422   TGATATAAAAATAAA              TTTTCC ATTT GGAAAA               TTTTTTGATGTTGGC  82 361
JCR18_RS08660 1792196 .. 1792225 -  -2.1  -2.74605   TGTCTGTAAAAGTCA       TGCCCATAGTTAC TCCT GAAACTGTAGACA        AACAATTTTTAAAAT  40 112
JCR18_RS08655 NONE
JCR18_RS08650 NONE
JCR18_RS08645 NONE
JCR18_RS08640 1789631 .. 1789655 -    -8  -5.00616   TTTCTTTTTAAAAAA         CGCTAAC-TGA GAAT TCAAGTTAGCG          TTGAAGGAAATGGAA  91 63
JCR18_RS08615 1782580 .. 1782611 - -12.6  -3.50572   ATGGACTGCATATAA      TAATAGATAGATTG TTAT CAACCTATCTATTA       TGTATTGAACATATT  91 39
JCR18_RS08610 1781303 .. 1781316 -  -3.1  -3.84961   CAGGTAATTATCAAA               CACAA TTAA TTGCG                GTAACAGTTTTAACT  54 373
JCR18_RS08465 NONE
JCR18_RS08460 1755714 .. 1755730 -    -8  -5.60993   TTGTTTATAAAAAAA              CCTGTG ATCAA CACAGG              TTTTAACGACAAAAG 100 47
JCR18_RS08440 NONE
         maf NONE
JCR18_RS08430 1750568 .. 1750589 - -10.3  -5.86976   TTATAAAAGAAAAAA           GGAGAAATT TTAT AATTTCTCC            TTTTTATATATTTAG 100 47
JCR18_RS08425 1749620 .. 1749632 -  -2.7   -3.8374   TTAAAAAATGTCAAA                CTCTA AGC TAGAA                TGACTTTCAGACGCA  51 100
JCR18_RS08420 1748900 .. 1748913 -  -2.5  -2.80437   AATACATTAATATTA               TTATA ATTT TATAA                GTTTAGAGCAGTTAT  42 37
        sstT NONE
JCR18_RS08410 NONE
JCR18_RS08405 1746032 .. 1746069 - -10.1  -2.73681   TATTTATTTTAAGCA   GTATGAGCCTTTATC CGAATGTT GATAAAGGCTCATAA    CAGTTACCACATTAA  77 29
JCR18_RS08400 NONE
JCR18_RS08395 1743419 .. 1743430 -    -3  -2.67667   CGATTCATTAAACAT                TCTT TTTA AAGA                 CAACGATTTTTGTCG  42 6
JCR18_RS08390 NONE
        gcvH 1741820 .. 1741838 -    -6  -5.77988   ACATATATAAAAAAA             CCAGTTAA ATC TAAACTGG             TTTTTTTATTAAAAC  95 51
JCR18_RS08380 1740736 .. 1740750 -  -8.6  -3.06162   TACGGCATTTCAAGA               GGTTGA GAT TCAACC               ATAAAAGAATTTTTT  72 338
        putP 1739133 .. 1739146 -  -9.5  -4.53857   ACTAAAAATAAATAA               GGGGC CGAA GCCCC                TTTGTTTATTTCAAT  91 44
        putA 1734726 .. 1734747 -  -8.8  -5.68438   TTATTAAACAAAAAA           GCCCAAAT ATCGTA ATTTGGGC            TTTTTAGAAAATTAC 100 45
JCR18_RS08360 NONE
        trmA 1732947 .. 1732969 -  -9.3  -4.62904   AAACACCTTGAAAAA           TAAGGAGAT ATTTA ATCTCCTTA           TAAAATAGGGTTACA  90 55
JCR18_RS08350 1732496 .. 1732512 -    -8  -5.63645   GTAAAATATAAAAAA              GCCAGT ACAAG ACTGGC              TTTTTAATTAATGAA 100 33
JCR18_RS08340 1730937 .. 1730953 - -10.9  -5.01732   AAGTTTTCTAAAAAA              GTCCTCA ACT TGAGGAC              TTTTTTAATTAGATA 100 34
JCR18_RS08330 1729670 .. 1729687 -  -8.3  -5.22006   TGAGCAGAATAAAAA             GCGTCCC GATT GGGGCGC              TTTTTTTATGAGCTA  93 42
JCR18_RS08320 1725937 .. 1725954 - -12.7  -5.80727   AAAAATAATAAAAAA             GCCCGCT GAAG AGCGGGC              TTTTAATATAATCAG 100 42
JCR18_RS08310 1725111 .. 1725137 - -18.2  -5.00895   TCTATTATACAAAAA         GGGCCTAAATCT AAA AGATTTAGGCCC         TTTTTAATTTATAAC 100 43
JCR18_RS08300 1723124 .. 1723136 -  -5.5  -4.46212   GCCTTCATGAGAAAA                TGGGC TTT ACCCA                CGCTGGTACTTTTAA  70 197
        ruvC 1721010 .. 1721035 -  -3.3  -3.68757   TTGAAAATGACAGAA         TTGCTGCGA TTTATGCG TTGCAGCAA          AAATATGCAGGCCAG  52 319
        queG 1718671 .. 1718688 -  -2.7  -2.56914   GATGGCATTAATTCA             CTGTACA TAAT CATACAG              AATTCGTATTAAAGC  40 77
        bioB 1717614 .. 1717631 - -11.3  -5.42514   GTATAAATGAAAAAA             GCCCTGA ATGA TCAGGGC              TTTTCAGTTTTTGCT 100 45
JCR18_RS08255 1715964 .. 1715985 - -10.3  -3.05385   AATAGATGAGATATA           GCTTCTATT TAAA AATAGAAGC            TGGTTTTAATTTATT  83 36
JCR18_RS08250 NONE
JCR18_RS08245 NONE
JCR18_RS08240 1711417 .. 1711445 -  -7.5  -3.21218   AGTGGTTATCACTAA        TGCTCATTAGC TTTTTTC GCTTATGAGCA        TTTTTTTAATTTATT  69 160
JCR18_RS08235 1710515 .. 1710526 -  -2.2  -4.98255   GTTCAAGGACAAAAA                CAGC AAAA GCTA                 AAACAACGGTTAAAT  67 323
JCR18_RS08225 NONE
JCR18_RS08220 1708310 .. 1708325 - -10.4  -5.26316   TCAGTTTATAAAAAA              GCCCTC CATT GAGGGC               AGATAATCAGACTTC 100 32
JCR18_RS08215 1706619 .. 1706654 - -10.7  -2.77439   TAGAAAAATATTAAT    GAGATATCAAAGTAT TATTTT AGACTTTGATATCTC     GTCTTAACATTATTT  80 35
JCR18_RS08205 1704821 .. 1704841 - -12.7  -3.83811   GAAATACAGTAAGAA            GCCTATTCA TTA TGAATAGGC            TTTTTGCTTTCTTTA 100 364
JCR18_RS08195 1703096 .. 1703120 - -15.9  -5.22039   TCTAAAGTTAAAAAA          CCCCAAAAACT TAA AGTTTTTGGGG          TTTGTATTTGGTGGG 100 34
JCR18_RS08185 1701106 .. 1701118 -  -2.7  -2.83903   TTGTCTAAAAAGGTA                GAAAA TTA TCTTC                CAAACAAATTTTATT  42 140
JCR18_RS08180 1700442 .. 1700458 -  -7.3  -3.93288   TGTTAGCCAATTAAA              TAAGCTC AGA GAGCCTA              AATTTACATAAAAAT  72 69
JCR18_RS08175 1699564 .. 1699579 - -10.4  -5.43621   ATAAAGTATAAAAAA              CGCACC ATTT GGTGCG               TTTTCTCGTCTTAGG 100 36
JCR18_RS08160 1696203 .. 1696218 -    -9  -5.55769   TGTGACAATAAAAAA              GAGCCA TGAG TGGCTC               TTTTTTTTACAACTA 100 45
JCR18_RS08130 NONE
JCR18_RS08125 NONE
JCR18_RS08120 NONE
JCR18_RS08115 NONE
JCR18_RS08110 NONE
JCR18_RS08105 NONE
JCR18_RS08100 1683934 .. 1683952 - -13.2  -3.83998   TGATTTTACATGAAA             GCCATGAC AAA GTCATGGC             TAGAGCAGGGTTCTG 100 47
        ychF 1682748 .. 1682779 - -14.7  -3.48105   TTAAGCCATTAAATA      TAAAAAAGCCCCA ATCTAG TGGGGCTTTTTTA       AGCTTTAACTTAAAC 100 35
JCR18_RS08085 NONE
JCR18_RS08080 1680862 .. 1680880 -  -8.9   -5.4492   TATACATATAAAAAA             GCGAGAT GATCA ATCTCGC             TTTTTTGCTTTAAAC 100 60
JCR18_RS08070 NONE
        ygaH 1679112 .. 1679157 -  -4.9  -2.55019   AATTTCAAAAATGAG TTTTTATGCTAGAAGTTATTA TTCT TAATCACTTCTAGCATTTATA TATTATATAAGGTTG  50 55
JCR18_RS08060 1678676 .. 1678692 -  -2.3  -2.87931   TGTAGTTTTTAGATA              TTAACCT GAT AGTTTAA              AAGCAATTCATCTGC  41 2
        purT NONE
        glnD NONE
        dapC 1673472 .. 1673483 -  -2.2  -2.69649   AGAGGCTTACAGAAT                CGCT TTTA AACG                 CTTAACTACTTCTTC  40 5
JCR18_RS08020 1669252 .. 1669271 -  -2.1  -6.20267   GTAAAAATAAAAAAA            GGCACCT AATTTA AGATACC             TTTTTTATTATGCAT  84 45
JCR18_RS08015 1667454 .. 1667485 - -11.9   -5.7946   TTTGGAAGAAAAAAA      GAGCAATTTTATA AGGTCG TATAAAATTGCTC       TTAAGTTGGGAGAGT 100 57
JCR18_RS08010 1665730 .. 1665759 - -13.7  -4.89393   TAAAGCGGATAAAAA       GAACCAGCCCAAA TTGA TTTGGGCTGGTTA        GGAATTTTAGTACTG 100 32
        dnaE NONE
JCR18_RS08000 NONE
        cysE 1660266 .. 1660283 -  -6.3  -3.86481   AATAAGGTACAACAA             GTCTAGG AAAA CCTAAAC              CGACATGCAAGGGTA  66 68
JCR18_RS07990 1659244 .. 1659261 -  -8.4  -5.88197   TCAAACATAAAAAAA             GGGCTG TCAAAT CAGCCC              TTTTATAAAGTTTAA 100 45
JCR18_RS07985 1657119 .. 1657152 - -15.5  -4.30448   AAATCTAACCTAAAA     CAAAAGAGCCAAAGG ATAT CCTTTGGCTCTTTTT      ATTTTTTATGGTTTA 100 31
JCR18_RS07965 1653236 .. 1653251 -  -4.7  -3.38036   AATGACTTTAAAAAG              TGCCT TTATAT AGGCA               TTTTTTATTGCCTAG  56 50
        arsC 1651154 .. 1651178 -  -6.5  -5.08824   GTTTCATTCAAAAAA          GCTAAACGG TGCCATG CCATTTAGC          TTTTTATATTAATAA  82 51
JCR18_RS07930 1647123 .. 1647154 -    -8  -4.95957   CAAACTAATTAAAAA      TCGTGGGCCAATTCC TAT GGAAAAGGCCCA-GA      TTGGTTATTTTATGG  91 30
JCR18_RS07920 NONE
JCR18_RS07915 1643266 .. 1643287 -  -5.1  -3.12666   TTACAGCGAAAACTA           CGTGGCTTA ACTG CAACCCACG            ATATTCGTAAGTCTT  53 509
JCR18_RS07865 NONE
        cydB NONE
JCR18_RS07855 1629661 .. 1629687 - -13.8  -4.51994   TGAACCAATAATAAA         TGCCGCTTGCAG AAT CTACAAACGGCA         TTTGTTTATAAGGAT 100 45
JCR18_RS07850 1628151 .. 1628163 -  -3.5  -4.04209   TGAAACTATCATAAA                TTAAA TAC TTTAA                AATTGTGCTTAGGTC  56 52
JCR18_RS07845 1627152 .. 1627172 -  -2.5  -3.71745   TAATCAGGCAAAAGA            GCTGTTG TTATTCG CAGCAGC            TTCTATCTTTTAAAG  48 28
JCR18_RS07795 1617895 .. 1617906 -  -2.2  -2.82142   TGCATATTGAAGAAG                CACA TCGC CGTG                 TAGAAATTGGTTCGA  41 344
JCR18_RS07780 1614890 .. 1614924 -  -3.7  -3.57263   ATCGTTATCGGGAAA    CG-ATTCGTAAAAACC TCGG AGTTCTTACGATTGCG     ATTATTGTGGGCATG  52 441
JCR18_RS07765 NONE
        yfcF NONE
        yghU 1611492 .. 1611517 -  -7.7  -3.06261   TGCCAACTTTGAATA         CCCGCAAAA-AT GAA ATATCTTGCGGG         TAAGTCAAAAACTAA  67 50
JCR18_RS07745 1609685 .. 1609711 - -12.4   -5.1675   TTATTTAGTAAAAAA         CCGTACAGATTA AAA TAATCCGCACGG         TTTTTAAAATTAAGC 100 35
JCR18_RS07740 NONE
JCR18_RS07735 NONE
JCR18_RS07730 NONE
JCR18_RS07725 1604873 .. 1604890 -  -7.7  -5.66684   GAATCCATAAAAAAA             GACCGCT CGAA AGCAGTC              TTTTTTAATAAATTT 100 39
JCR18_RS07710 1602674 .. 1602698 -    -3  -3.00651   CTGTAGATGAGAAAG          TTTTTTGG TTACTTTTT CCAAAAAA          AAAGTAACAGAATTA  45 99
JCR18_RS07705 1602145 .. 1602162 -  -2.7  -4.81359   AACTTAAAGATAAAA             CCTTGCT AGTA AACAAAG              GTACAACGGCTGATT  65 438
JCR18_RS07675 1598378 .. 1598395 -  -2.6  -5.11063   ATCATTTAATAAAAA             TCGGGC CTTGGT GTCCGA              TTTTTTTTTATTAGT  66 88
JCR18_RS07655 1591651 .. 1591666 -  -7.6     -6.13   AGATGTAAAAAAAAA              GAAGCT TTAA AGCTTC               TTTTTTAATTGGTAA 100 47
JCR18_RS07645 1590360 .. 1590388 -  -7.5  -3.10343   ATATTTATTATTTAA        GTTACCGACCC GAAAAGT GAGTCAGTAAC        TTTTTCCTAAATGAC  67 43
JCR18_RS07635 1589163 .. 1589187 - -15.9  -3.30007   AACAGTTTTTGAGAA          TAAAGGAGGCA TTA TGCCTCCTTTA          TTTTTATTATTTTAA 100 43
JCR18_RS07625 NONE
JCR18_RS07620 1586008 .. 1586035 - -11.4  -6.23545   CTTAAATAAAAAAAA        GCCCTGAAAG TTTAAACG CTTTCAGGGC         TTTTTCTAAATTATG 100 44
JCR18_RS07605 1581430 .. 1581451 -  -3.9  -3.67417   ATATTTAACTGTAAA           CTTAAAATT TATA AATTTTAAA            TAACTTGCTGATTTT  53 168
JCR18_RS07600 1581035 .. 1581046 -  -5.8  -3.18383   ATTTTGATTTAGGAA                GGTG AGGT CACC                 TTCCTAAATGATCGA  59 67
JCR18_RS07595 1580608 .. 1580638 -    -7  -5.58179   TAGGACAATAAAAAA       GCCTATTTCCCA GGGCCAA TAGGAAATAAGC       TTATAGCTATGGACC 100 52
JCR18_RS07575 1577710 .. 1577727 -  -4.1  -3.05844   GTTGCGATTCGAACA             GGACCTT TGAA AAGCTCC              AATCTGGTGGCCCGC  47 468
JCR18_RS07565 1575875 .. 1575907 - -13.5  -3.02639   ATTTTTAAATAAGCA      GCCCCATCATGTGAA GAT TTCACCTGATGGGGG      AATGATTAATTTTTA 100 31
JCR18_RS07540 NONE
JCR18_RS07535 NONE
JCR18_RS07530 NONE
JCR18_RS07525 NONE
JCR18_RS07520 1564343 .. 1564362 -    -5  -4.43221   AAATAGGGTAGAAAA            TGCTTCTT TTTA AAGAGGCA             TTTAATACAGAAATA  67 180
JCR18_RS07510 1559596 .. 1559613 -  -9.9   -5.4833   TGAGCCAATAAAAAA             GTCATCC CTAA GGATGAC              TTTTTTATTTTGAGA 100 49
JCR18_RS07495 1555990 .. 1556006 -  -5.1  -5.24551   GCAAAGCAAGAAAAA              GCTCC ATAAATA GGAGC              TTAGATATTTTATTA  79 38
JCR18_RS07460 NONE
JCR18_RS07455 NONE
JCR18_RS07450 NONE
JCR18_RS07445 1544800 .. 1544832 - -12.1  -4.64861   GCTCTGCAAAATAAA      TCCATTCATCACTGC GCT GTTGTGATGAATGGA      TATCCGGTTCAATGG 100 41
JCR18_RS07440 NONE
JCR18_RS07435 1542651 .. 1542669 -    -6  -2.62983   CCTATTTTGAGATCA             GCACAAGT TTT AATTGTGC             TGATTTTTTGCATCA  55 16
JCR18_RS07425 1540578 .. 1540604 -    -8    -3.254   GATCCATTTATAAGA         GCCAGCTTTG TTTTTTT CAAGGCTGGC         TTTTTATTGGGTAAG  71 43
JCR18_RS07410 1536787 .. 1536810 -  -6.1   -4.8667   TACATTTGATAAAAA          GCACTTCAA GTCGTT TTAAAGTGC           TTAAAATTTGATTAA  80 37
JCR18_RS07405 1535316 .. 1535353 -  -8.5  -3.08992   ATTTAGGCCAATATA   TTTTTAAGCTTAGCTCC CTTG GGAGCTAAGCTTACCTA    AAAAATTAAAATGAA  72 182
        pobR 1524816 .. 1524843 -  -6.5   -3.6284   AATTATGAGTTGAAA        CTCTTG-TATCT CTAAT AGATAACAAGAG        TTTCTAAGTTTATTT  64 39
JCR18_RS07350 1523162 .. 1523183 -  -4.3  -5.37865   TGAATAATTAAAAAA           GCCTTGTTC AAGT GGACGAGGC            TTTTTTATTTTTAAG  81 42
JCR18_RS07295 1512549 .. 1512559 -  -2.6  -2.57564   GTATTTCCCTATAAC                 TTAT TCA ATAA                 AGGTCTATTTACCTT  40 59
JCR18_RS07290 1512207 .. 1512240 - -12.1  -4.37734   TATAACAACTTAAAA     TAGAATTGATTTCTCA AGT TGAGAAATCAATTC-A     GCAATTTAGATCCCT 100 31
JCR18_RS07265 1507446 .. 1507458 -  -3.5  -3.78091   AATCATAAAATAACA                TTTTT AAT AAAAA                CCTTCTGTTCCATTA  54 68
JCR18_RS07260 1506232 .. 1506263 - -13.4  -4.68424   TAAGGTATTTAAAAA      TATTAGACAATTAA ATAT TTAATTGTCTAATA       AATATTTTAAATATT 100 12
        paaZ 1490922 .. 1490950 - -13.2  -5.42259   TGAGTGTTAAAAAAA        TGAGATGGGGAC GAGGT GACCCCATCTCA        TTTTAAACATTAAGC 100 35
JCR18_RS07170 1487387 .. 1487409 -  -8.5  -3.12999   TCACTTGAGAGTGAA           CGTCAAAAG TGCTT CTTCTGACG           TTGGAGAGTTATCAA  72 132
JCR18_RS07165 1485748 .. 1485772 -  -9.4  -5.63103   TTTGAACTAAAAAAA          GGAGTTCATC TCTTG GATAAACTCC          TTTAAAAAAATTAAA 100 36
        abaF 1484279 .. 1484299 -  -9.8  -5.72616   ATTTAGATAAAAAAA            TGGGTTGT ATAGA ACAACCCA            AATCATTATTAAGTG 100 61
JCR18_RS07125 1477732 .. 1477751 - -10.8  -5.96219   TATCTATAAAAAAAA            GAGGCTAA CGAT TTAGCCTC             TTTTTTACTTCTATT 100 43
JCR18_RS07105 1473671 .. 1473687 -  -5.1  -3.54051   ACAAATTTCACAGAA              CCCTTAT CCT ATCAGGG              TTCTGCCTTCTTAAA  56 1
JCR18_RS07100 NONE
JCR18_RS07095 NONE
JCR18_RS07090 1470701 .. 1470719 - -13.2  -5.04601   TCCATAAAGCAAAAA             GCCCAAGT TGA ACTTGGGC             TTTTTAATGTCTTAC 100 41
JCR18_RS07055 1465464 .. 1465487 - -11.1  -4.54727   TCGCTTAAACTAAAA          GAGAGCATC GATATT GATGCTCTC           TTTTTTATTATGCTT 100 33
JCR18_RS07030 1458242 .. 1458255 -  -8.1  -5.52079   ACACTAAAATAAAAA               GCCCA TCAC TGGGC                TTTTTTAGTGGGTAT 100 48
JCR18_RS07020 1456595 .. 1456630 -  -4.3  -4.57569   GTATCGCTGTAAAAA    TATTATCTGATTA AGTCGTAATA CAATCAGATAATA     TTTTAATTAATAAAG  68 73
JCR18_RS06950 NONE
JCR18_RS06945 1433562 .. 1433584 -  -5.1  -3.78861   CGATATAAAACAAGA           TAAATAATT TAGCT AATTATTTA           AATTAGCCTTTTTCA  60 57
JCR18_RS06940 1432966 .. 1432996 -  -5.7  -4.17048   TCCTTCGTAAAAGAA       TATAGAAGTAT TCGTCCACC ATACTTCTATA       TATTGCTGGTTTAAA  69 84
JCR18_RS06920 NONE
JCR18_RS06915 1428715 .. 1428739 - -10.1  -3.57971   ATATTTATGGGTAAA          TGGCTCTTCCT GAA AAAAAGAGCCA          TTTAAATTGATAGAT  86 45
JCR18_RS06910 1427531 .. 1427557 -  -5.2  -3.32984   TTAAAATTGATAAGA         CAGGATTTTATA AAG TATTAATTCCTG         TTTTTCTGGTTGCAG  54 452
JCR18_RS06880 1420523 .. 1420535 -  -4.9  -4.59853   TCAAGTCTTTAAAAA                TGAAT GTA ATTCA                AGAAAAGTACAACAA  69 218
        mutS 1417769 .. 1417798 - -11.6  -3.51232   TTCTCCTTAAAGTAA       GAGCAAACATGC CTATAC ACATGTTTGCTC        AATGAGTGATTATGA  90 35
JCR18_RS06870 1417198 .. 1417218 -  -4.1  -3.84422   CGATAGACAAAAAAT            CTTTAAG TAATGAG CTTAAAG            TGTACAAAGTAAATG  56 20
JCR18_RS06865 1416518 .. 1416535 -  -9.9  -5.26918   ATAGGGTATAAAAAA             GATCAGC GGTT GCTGATC              TTTTTGAAATTATTT 100 35
JCR18_RS06860 1415657 .. 1415684 -  -6.3  -3.88015   TATAGAATGAGCAAA        TCCCCTTAAAC TGAAGC GCATAAGGGGA         TTTATATTTTAGAAA  66 34
JCR18_RS06855 1414774 .. 1414818 - -16.1   -2.8934   GGCTAAATGATGAGA TTTGCATATAGTTATCCGCAA ATC TTGTGGATAACTATATGGAAA AGCAGGGGTAATAAA 100 92
JCR18_RS06795 NONE
JCR18_RS06790 1402213 .. 1402238 - -11.3   -5.8187   CAGCCAATAAAAAAA         CCACCTAATTC TTTC GAATTAAGTGG          TTTTTGAATTTTGGA 100 37
JCR18_RS06770 1397937 .. 1397958 -    -3  -3.33261   CGTCAATGGGGAGAA           CACAACTT ATTCGA AAGTGGTG            AGCGCCATTCTCTGT  46 423
JCR18_RS06760 1396082 .. 1396093 -  -4.4  -3.37755   AGATATTCCTAAAGA                TGAG CGGA CTCA                 GTTAATGGGCCAAAT  52 237
JCR18_RS06740 1393270 .. 1393306 -  -8.9  -2.97951   TAGCTGATTACAAAG    TGCCTTCCAAATATTAA CAC CTTATATTTGGAAGGTA    TTTTTTTAACCACCA  73 127
JCR18_RS06720 1390314 .. 1390356 - -13.8  -5.26316   TCAGCTTATAAAAAA GCCAACTTGCTAAAGCTAT TGAGTT ATAGCCTTA-CAAGTTGGC TCACTTTCATAAAAT 100 45
JCR18_RS06705 1387941 .. 1387964 -  -8.2  -5.25805   AATAAAGCGAAAAAA          CCTATCTCTT TTAA ATGAGATAGG           TTTTTTTATATCAAG  93 126
JCR18_RS06690 NONE
JCR18_RS06685 1385678 .. 1385709 -  -8.8  -3.14211   AGTGGTGTTCACTAA      GCCCATTTCTTC AATGAGAA GTAGAAATGGGC       TTTTTTTATGGAAAT  72 41
JCR18_RS06670 1383807 .. 1383832 -  -6.9  -3.86822   CAACTGGTCGATAAA         GAAGAAGCACC TACG GGTACTTTTTC          TGTATGACTTGACTA  69 54
JCR18_RS06665 1382658 .. 1382672 - -11.4    -4.386   CAACGTTGCAGAAAA               GCCCGT GAA ACGGGC               TTTTTTAATGCCTAT 100 378
JCR18_RS06645 1378642 .. 1378672 -   -12  -3.33509   TTTTAAATAAGGGAA       GTGCATAGCCTCAA AGG TTGAAGCTATGCAA       TTTTATATCTTATTG  89 35
        benA NONE
        benB NONE
JCR18_RS06625 NONE
JCR18_RS06620 1373609 .. 1373628 - -12.2  -5.14985   CCAAATATATAAAAA            GATCAGGG TTAA CCCTGATC             TCCACCTCCGACCGG 100 14
        benE 1372260 .. 1372275 -  -3.4  -4.32649   ATCTTAAAAATGAAA              TTTAAT TTAT ATTAAA               TAAAAATTGCCAAAT  58 116
JCR18_RS06610 1370516 .. 1370534 -  -8.1  -3.91506   CCATTTCCAAAAAGA             TGCGCCA GTCCT CGGCGCA             TTTATGTTTACTGCT  77 33
JCR18_RS06605 1369191 .. 1369218 - -11.4  -4.53475   ATGGCACAAAAATAA        TAAAGCGAGCCA AAAT TAGCCCGCTTTA         GTTGAATCAAAAATA 100 42
        ahpC 1363105 .. 1363138 - -12.6  -4.18018   TGTGCTTATTCAAAA     CAAAAGAACCATCC GATAAA GGATGGTTCTTTAG      GTTTCTAAAATCTAA 100 47
JCR18_RS06585 1362530 .. 1362541 -  -2.2  -3.13773   GGCCAGATTTAAAAC                GCCT AATG AAGC                 CTAAAGGTGGGGTTT  43 236
        ahpF 1359964 .. 1359987 -   -14  -5.14563   TCTCGTATTAAAAAA          GCCTAGCATT TTGT AATGCTAGGC           TTGAATTAAATGATA 100 56
JCR18_RS06565 1359450 .. 1359490 -   -23  -4.15508   AAGCAATTTTCAAAA  GCATTAAAAAAGCCCCTA AGCAA TAGGGGCTTTTTTAATGC  TAAAGCGAATTAGTG 100 35
        trmB 1355288 .. 1355310 -  -9.9  -4.57516   ATATTGAAATGAAAA           GGGCCTAGT TTGTT ACTAAGCCC           TGTTTCTTACTTAAT  93 32
JCR18_RS06545 1354378 .. 1354390 -  -4.7  -2.88653   CAAATGCAAACAGGA                CCTGC AAT GCGGG                GAGATCAGAATATCT  48 155
       rlmKL 1346797 .. 1346816 -  -5.8  -2.53581   TACATGGTGAAGTTA            TCATTACC GTGA AGTAATGA             TAACTTCCTTTTCAA  54 48
JCR18_RS06505 1345607 .. 1345628 - -10.3   -4.4267   TGCTAAAACCGAAAA           GAGAATATG GAAA CATATTCTC            TTTTTTTATATTTAA  95 37
JCR18_RS06495 1341413 .. 1341430 -  -4.1  -5.75538   CCTAAAAAATAAAAA             GCTAACA GTCA TGTTGGC              TTTTTTTATGATAAG  86 491
         crp 1339777 .. 1339800 -  -3.2  -3.41024   TTGTTTAAGATAAGA          TATAACTCAT TGAG ATGTGTCATA           GTATTCGTCGTTAGA  48 81
JCR18_RS06470 1338585 .. 1338600 -  -7.6  -5.71712   TTGCATATAAAAAAA              GCAAAC CGAA GTTTGC               TTTTTATTCAATAAT 100 134
JCR18_RS06465 1337387 .. 1337404 - -11.3  -4.63184   AACTGATGTTAAAAA             CGGATGC TTGA GCATCCG              TTTTTGTTTTTTAAG 100 36
        alaS 1329216 .. 1329241 - -10.5  -2.63079   GTTCCATATAAGCCA         TGACCCTGAGA GGCT TGTCAGGGTCA          GTTACACAAAAAGTG  80 46
JCR18_RS06430 1327817 .. 1327850 - -16.2  -3.65812   TTCCGTTTAATATAA     CAGAGCCGCTATAA AAAAAA CTATAGCGGCTCTG      TGTTTTCTTTGATTA 100 91
        csrA 1327366 .. 1327393 -   -10  -5.04385   TATATTCCCAAAAAA        TTTAAAGCGACT ATAA AGTCGCTTTAAT         TAGGGAGAGAACAAC 100 47
JCR18_RS06410 1325494 .. 1325510 -  -9.4  -5.96894   ATCTAAATAAAAAAA              CCGCCT GTGAT AGGCGG              TTTTTTTAACATTGA 100 43
JCR18_RS06375 1317435 .. 1317460 - -13.4  -5.28826   AAATGTGATAAAAAA         CACCTGCGTA TACTTC TACGCAGGTG          TTTTTACTATTTATG 100 36
JCR18_RS06365 1315266 .. 1315287 -  -9.5  -3.26366   TAGATTTAAGGAACA           CCAGCCATT AAGT AATGACTGG            TTGCAAGCCAGTTAA  78 37
JCR18_RS06360 1314142 .. 1314165 -    -6  -4.30576   GCTCCATCAGCAAAA          GGGGATGATA AGTT TATCACCACC           GACTATTTGCAACAG  69 263
JCR18_RS06350 1313050 .. 1313066 -  -7.3  -4.09108   TTCAACTGATAGAAA              CTCCTGA TTA TCAGGAA              TATCAAACAAAACCA  74 376
JCR18_RS06330 1304801 .. 1304824 -  -5.4  -3.04715   GACCGTTCCGAAAAG          CATTAAAAGA GCAA TCTTTTAGTG           ACGAACCCTCGTGCC  54 226
JCR18_RS06325 1304296 .. 1304311 -  -4.8  -5.00884   ATTTTCGCGAAAAAA              TTATTG ATTC CAATAA               GTATTAAACATTTCT  75 10
JCR18_RS06315 NONE
JCR18_RS06310 1300098 .. 1300118 -  -5.3  -4.24002   CGCCAAATTCGAAAA            GCTCCTGTT AAA AGCAGGGGC            TTTTTTTATATCTAT  66 159
        argG 1296220 .. 1296237 - -11.3  -5.95539   CTTTAAATAAAAAAA             GCCACCT ATAG AGGTGGC              TTTTTTGACCTTATA 100 46
        pyrC NONE
         rnt NONE
JCR18_RS06275 NONE
JCR18_RS06270 1290669 .. 1290705 - -14.1   -2.7641   AAAAATTTCTTAAAG    TAAAGGTACTATTTC TAAGGAT GAAATAGTACCTTTA    TGCTCAATTTAGAAC 100 34
        dnaQ 1278740 .. 1278755 -  -2.6  -3.22448   TCAAATTGAATCGAA              TTATGC TCAG ACATAA               AAAATTCCCCTTTGC  44 158
JCR18_RS06230 NONE
        nudC 1275890 .. 1275901 -  -4.4   -3.8297   AAGAAAAATTGGAAA                TCTC GACA GAGA                 ATATTGTGCTTATGG  59 491
        rsmI NONE
JCR18_RS06200 1272440 .. 1272453 -  -3.9   -3.4285   GGAGTTAACCGAGAA               GTTTT AAGA AAAAC                ACCGGCGGTTATTTT  50 350
JCR18_RS06190 1271135 .. 1271154 - -10.8  -5.26316   TGATTGCATAAAAAA            GTACCATG TAAG CATGGTAC             TTTTTTTGTTTTTGA 100 46
JCR18_RS06180 1269964 .. 1269981 -  -9.9  -5.27779   GTTAATATTAAAAAA             GCATCAC TTGA GTGATGC              TTTTTTATTGCCCGT 100 52
JCR18_RS06150 NONE
JCR18_RS06145 NONE
        ssrS NONE
JCR18_RS06135 NONE
JCR18_RS06130 1261666 .. 1261705 - -10.3   -5.4659   TAATATAAATAAAAA  GAGGGTAAATAATAG ACTGTAGACG CTATTATTCACCCTC   ATGGTATATATCTTT 100 39
JCR18_RS05910 1225643 .. 1225662 -  -7.9  -3.69621   AGTCATAAGGGGAAA            GCCTACT TGAAAG AGTAGGC             TTTTTTATGAGAAAT  73 40
JCR18_RS05840 NONE
JCR18_RS05835 NONE
JCR18_RS05830 NONE
JCR18_RS05825 1216935 .. 1216951 -  -9.4  -5.45813   TATTAAAAAAGAAAA              CCCACC GTGGT GGTGGG              TAGATTAGATGAATT 100 51
JCR18_RS05820 1216566 .. 1216598 - -12.9  -3.54424   GCGTATGCGCTGAAA      GCTATTCTTGATGAC TTT GCCACCAAGAATAAC      TGCAAGGTAAGTATA  95 62
JCR18_RS05810 NONE
JCR18_RS05805 NONE
JCR18_RS05800 NONE
JCR18_RS05795 NONE
JCR18_RS05790 NONE
JCR18_RS05785 NONE
JCR18_RS05780 NONE
JCR18_RS05775 NONE
JCR18_RS05770 1211422 .. 1211436 -  -8.5  -5.14563   TTGGTGATTAAAAAA               GCGGC ACTTA GCCGC               TTATGCTGTATGTGC  95 26
JCR18_RS05750 1209146 .. 1209168 - -10.6  -3.59979   GTCTGTCACGGCAAA           GTAACCATCC TTA GGGTGGTTAC           TTTTTCGTTTTTTAA  87 95
         lon 1198253 .. 1198268 -  -6.8  -6.09888   GTGTAACAAAAAAAA              GAGAGC CGAA GCCCTC               TTTTTTTATATGTGA 100 42
        rlmH 1197414 .. 1197434 -  -3.3  -4.14243   CACCTGAGTTGAAAA            GCAGAATAA TAG TCATTATGC            CAAAATCAGGACATG  56 95
JCR18_RS05725 1196491 .. 1196505 -  -2.9  -3.70019   ACTAAGCTTAAAACA               TTCTT AAAAA AAGAA               AATGTAAACATTTGA  50 135
JCR18_RS05720 1195300 .. 1195319 - -12.2  -6.04953   ATAGAAATAAAAAAA            TCCGATGC AAAA GCATCGGA             TTTTTTAGTCTAAAA 100 42
JCR18_RS05710 NONE
         nth 1192098 .. 1192118 - -11.3  -4.04394   TTTAAAGTAACCAAA            TTGGGTATA AGC TATACCCAA            CTTTTATTCTGCCTC 100 29
        mrdA NONE
        rsmD 1186424 .. 1186440 -    -8  -4.65895   CTTTGTAGCGAAAAA              GGTAGC TTAAG GCTACC              TTTTTATTCGCTTAC  85 29
JCR18_RS05630 1180081 .. 1180120 - -16.2  -3.33162   TATTTTAGTTGAGAA  TTAAAAGTATCCACTAAA GTGA TTTAATGGATACTTTTAA   AAATTTATGGTTGGG 100 30
JCR18_RS05625 1179399 .. 1179416 - -12.7  -5.26316   TGACTTCATAAAAAA             CCCGCTC ATTT GAGCGGG              TTTTTTATTTATATT 100 51
JCR18_RS05615 1176123 .. 1176154 -   -11  -5.47159   TTTTAACACAAAAAA      GCGCTGAGGTAATCA GAT TGATTGC-TCAGCGC      TTAAAGATAATGTTT 100 68
JCR18_RS05610 1174711 .. 1174730 - -10.8  -6.15828   TTTATCAAAAAAAAA            TATCCTGC ATTT GCAGGATA             TTTTGCACCAAAATA 100 43
JCR18_RS05605 1172813 .. 1172836 -   -14  -6.01725   AATAAAAATAAAAAA          TAAAAGCCCC GATA GGGGCTTTTA           TTTTTATAGTAGAGC 100 44
JCR18_RS05595 1171471 .. 1171484 -  -9.5  -4.64144   AATAAGTTCTAAAAA               CCCGC GTAA GCGGG                TTTTTTTATTGAGTT  93 40
JCR18_RS05565 1164276 .. 1164287 -  -4.4   -3.3447   GAGAAGGAAATGGAA                TGGT TTCG ACCA                 TTGAAGAAATGAAAA  52 343
JCR18_RS05555 1163456 .. 1163474 -  -6.7   -5.4251   GTGATATATAAAAAA             GACCATG TAAAT CATGGCC             TTTTAATTTAAGACA  93 41
JCR18_RS05550 1162183 .. 1162200 -    -2  -3.34013   CATTCCTTGAAGGAA             TACTCA AGATCA TGAGCA              TTCCCAATTTAAACC  44 41
JCR18_RS05545 NONE
JCR18_RS05540 1160281 .. 1160296 -    -9  -5.52079   ACAGTAAAATAAAAA              GGAGTC CGAA GACTCC               TTTTTTTATTCATGT 100 31
JCR18_RS05520 NONE
JCR18_RS05505 1151861 .. 1151887 - -13.9  -2.88155   AGAAAAATTTGAAAC         TAAAAGGTGCC TATAG GGCACCTTTTA         TGTATGGGTAAGCTA 100 9
JCR18_RS05495 NONE
JCR18_RS05490 1148862 .. 1148900 - -17.8  -3.33815   ATTCTTTTTAATCAA   TAAAATAATAAAGGCGCT TTA AGCGCCTTTATTATTTAA   AATCTCTAATGCTTT 100 5
JCR18_RS05475 1144973 .. 1144995 -   -15  -5.75599   TAAATGAGAAAAAAA           GAAAAGCCCA TAT TGGGCTTTTC           TCAAAAATATGGATT 100 40
JCR18_RS05470 NONE
JCR18_RS05465 NONE
JCR18_RS05460 1141586 .. 1141600 -  -8.6  -2.56571   TATAGAGCGAATTCA               TCAGGT TTG ACCTGA               AGGTAAAATGATCAA  69 310
JCR18_RS05455 1139770 .. 1139789 - -10.8  -5.27923   TAATTGCACAAAAAA            GCCCAATT CTAA AATTGGGC             TTTCAACGTTATTAT 100 37
        metH 1132422 .. 1132449 - -12.7  -4.35524   CTTTCAAATTGAAAA        GGGCGTGATGG GGAATT CCTTCACGCCC         TATTTTTAAACAGGG 100 53
JCR18_RS05415 1127087 .. 1127112 - -11.3  -4.22041   AAATCTCAATATAAA         TGGTAT-AGCCG TTA CGGCTGATACCA         CCATGACACAACTCA  93 243
JCR18_RS05405 1125469 .. 1125508 - -13.8  -4.55849   CAAAAGTTAAATAAA  TGAAAAGACTCTCAGCCA TATT CAGCTGAGAGTCTTTTTA   ATATGAACATAGCCT 100 52
JCR18_RS05395 1123129 .. 1123140 -    -3  -2.98381   CAACGGACCAAAGCA                CAAT CGTG ATTG                 ATTTAACCCAGATTT  43 237
JCR18_RS05380 1119827 .. 1119843 -  -9.4  -5.55664   GCAGTATTAAAAAAA              CCACGC AATCG GCGTGG              TTTTTTATTTAATAA 100 51
JCR18_RS05305 1105246 .. 1105260 -  -7.1  -5.70829   AAGAGTACAAAAAAA               GCGAC TTAAC GTCGC               TTTTTTTAATAGATA 100 31
JCR18_RS05290 1103206 .. 1103222 - -12.3   -4.7878   CATTTATAAAAGAAA              GCCCACA TCA TGTGGGC              TTTTTTTTCACTAAT 100 92
        dctA 1096731 .. 1096762 - -12.6  -3.75766   TGCAGAATTGAACAA      TAGAGAACATTGAA ATAC TTCAATATTCTCTA       TGAGAGATTTAATTT  95 34
JCR18_RS05250 1094932 .. 1094956 - -10.1  -5.75945   ACTTCTTAAAAAAAA          GATCGAACC GCAGCAT GGTTCGATC          TTTTTTCTTCACCGA 100 105
        betI NONE
        betB 1087287 .. 1087326 -  -5.9  -3.14132   TCCTTTTTTTACTAA CAGTTTGCCTGAGCAATCT ATAA AGACTGCTC-GGCATA-TG  TGATTTAGGTTGAAG  57 61
        betA 1085566 .. 1085602 - -11.8  -4.63048   GCTATAAATAATAAA    TTAAGGGCATATTCCT GCATA AGAAATATGCCCTTTA    AGATTTTATGATGCT 100 31
         mqo 1083402 .. 1083431 - -13.1  -5.06103   AGAAGTCTTAAAAAA       CAAAAGGACGAAT CGAA ATTCATCCTTTTG        ATATTTTACTTATAC 100 51
JCR18_RS05205 1082682 .. 1082692 -    -4  -3.92143   TAAAATTTTCATAAA                 TTAC AAC GTAA                 AGGGAGAAAAATAAT  56 228
JCR18_RS05200 NONE
JCR18_RS05195 1080425 .. 1080450 - -10.5  -4.36914   TTTGTTTTTAGAAAA         CCACTGCTGAA ATAG CTCAACAGTGG          TTGAAGTGATTAATT  95 35
JCR18_RS05180 1076660 .. 1076683 -  -5.2   -3.6692   TGTCATGGTAAAACA          TGAGCAGTCG CTAG CACCCGCTCA           ACCAGTCAGCAAACT  58 407
JCR18_RS05130 1065430 .. 1065449 -  -9.3  -5.58454   CGTACAGGAAAAAAA            GGCTAGC GTATAT GCTAGCC             CGAATGGAATTTAAG 100 36
JCR18_RS05125 1063557 .. 1063605 -  -3.3  -3.98913   GCCAGAGTCAAATAA CTTG-GTGAC-GGCATAGAGT-GA GCCA TCTACTCCAAGCCAGTCCCACAAG TAAGGTGACTGATAA  56 322
JCR18_RS05115 1061427 .. 1061450 -  -3.8   -4.4017   CTAATCTTTAGAAAA          GGAAGTAATG AAAT CATTTCCCCC           CAAGGCCCCCGTGCC  62 121
JCR18_RS05110 1060813 .. 1060828 -  -2.6   -4.4767   TGAGTCAGTATAAAA              CCTTTA TTTT TAAAGA               TGTTAAAGTGTTATT  60 160
JCR18_RS05075 1053843 .. 1053873 -    -4  -3.32895   ACAAAGTGAAATAGA       CAGTGCTGTATAGT TTT ATTATACGGTACTG       ATCACGAGTTAAATA  49 85
JCR18_RS05070 NONE
JCR18_RS05065 1052283 .. 1052300 - -11.3  -5.44721   AGCACTTTAAAAAAA             GCCCTGA ATAT TCAGGGC              TTTTTTATTAATTAT 100 33
JCR18_RS05030 1047790 .. 1047817 - -11.4  -4.15788   AAGGTGCTTAACAAA        TGAAAACCAGCT AACT AGCTGGTTTTCT         TAATTTGGGGAGTTC 100 72
JCR18_RS04990 1038878 .. 1038893 - -10.4   -4.7254   ACTGGCTATTAAAAA              GCCCCT TATT AGGGGC               TTTCATGTTTAAGCA  95 34
JCR18_RS04935 1022752 .. 1022769 - -11.3  -4.86385   AGTTCTAAAAAGAAA             GCCAGCT GTAT AGCTGGC              TTTAATATAAGGGGA 100 79
JCR18_RS04685 NONE
JCR18_RS04680  979651 ..  979669 -  -6.7  -3.65199   AACCTTGGATGGAAA             GACCGAC TTATC ATCGGTC             TTTTTTTATTATTTA  67 61
JCR18_RS04675 NONE
JCR18_RS04670  978480 ..  978495 -  -2.6  -2.79648   TAACATATTTTAAAC              CTTACT CAAA AGTAAA               TTCTTTGATTTCGAT  42 11
JCR18_RS04665  978071 ..  978087 -  -9.4  -5.24647   ATAGACAAAAGAAAA              CCCACC GTGGA GGTGGG              TTGGGTGGGGTTACC 100 46
JCR18_RS04660 NONE
JCR18_RS04655 NONE
JCR18_RS04650 NONE
JCR18_RS04645 NONE
JCR18_RS04640 NONE
JCR18_RS04635 NONE
JCR18_RS04630 NONE
JCR18_RS04625  973880 ..  973910 - -12.7  -3.52481   AAATATCCTATAGAA       GATTAAAGGCGCT TATTT AGCGCCTTGAATC       TCAACTTTAATCTTT 100 7
JCR18_RS04615  972075 ..  972087 -  -3.4   -3.0636   GTACATTAGACAAAT                CGAT CATTT ATCG                GGGACATGGAGAAAG  46 350
        hemB NONE
JCR18_RS04560  960525 ..  960539 -    -2  -3.48115   GCTTTAGAAAATATA               CTCGCC TCA GGCTAA               GATTTTATTTTGCAA  46 17
JCR18_RS04545  958279 ..  958303 - -12.9  -3.86684   ATAATTCATATGAAA          TAGCCACCGAT AAA AGCGGTGGCTA          TAAATTAAAATAAAT 100 57
JCR18_RS04535 NONE
JCR18_RS04530  952725 ..  952745 - -16.9   -5.1925   GCAGAATCTAAAAAA            GCCCCGACA GGA TGTCGGGGC            TTTTTAGTTTTTAAC 100 36
JCR18_RS04520 NONE
JCR18_RS04515  949514 ..  949535 - -11.7  -5.88476   AAAACAAATAAAAAA           GGAAGGTTA CGTT TAACCTTCC            TTTTTTTATGAAGAA 100 42
JCR18_RS04505  948487 ..  948511 - -10.7  -4.56133   GCTCAATAAGCAAAA          CCCCTCAAGTA TTT CACTAGAGGGG          TTTCTTTTTATTAGA  95 49
JCR18_RS04450 NONE
JCR18_RS04445 NONE
        minC  935348 ..  935359 -  -5.8    -3.052   ATGGTCATACATACA                CCCT TAAA AGGG                 CTGTTTTTTGGTGAT  57 53
        minD NONE
        minE  934169 ..  934194 - -13.5   -5.0538   CCTCATTTTAAAAAA         GGCAAAATAAC TTGC GTTATTTTGCC          TTGATTCTGTTTTAT 100 60
JCR18_RS04425  933856 ..  933878 -  -5.6  -5.96894   ATTCAAATAAAAAAA           GCTTAAGCAA ACT TTGCTAAAAC           TTCTAAAAACGGCGC  95 5
JCR18_RS04420 NONE
JCR18_RS04415  932906 ..  932934 - -13.4  -3.58869   GATAAATCCAGATAA        TAAAAAAGCCTC TTTAT GAGGCTTTTTTA        ATTACTAACTTTTAG 100 42
        trxB  927840 ..  927859 - -12.2  -5.49809   TAAATTCCAAAAAAA            CAGCCGTT ATAA AACGGCTG             TTTGAAATATCTAAA 100 42
JCR18_RS04395 NONE
JCR18_RS04390  926150 ..  926185 -  -7.1  -3.65046   TCTTTATTCTAAGAA    TGCCTGTCTTGTTGCT GTTTG AACAACAAGACAGA-A    GCAGATTATTTAATA  70 31
JCR18_RS04370  922216 ..  922233 -  -8.3  -5.08824   TTTTCAGTGAAAAAA             GCGCTCC TTTT GGGGCGC              TTTTTTTATATCGAA  91 145
JCR18_RS04340 NONE
        hemJ  914061 ..  914078 -  -7.7  -5.60689   CTAGATAATAAAAAA             CCCCAGT TAAA ACTGAGG              TTTTACAACAACTAA 100 14
JCR18_RS04330  912971 ..  912983 -  -6.3  -3.16203   GTAGCATAACATACA                TCAAC TAT GTTGA                AAGACAGACGCAAAT  59 78
JCR18_RS04325  912242 ..  912270 -  -2.7  -3.34716   TTATCGCTCAAAAAT       TTG-AAATAAGT TTTTAT ACTTATTTTCAA        TAATTTGACATTAGT  44 140
JCR18_RS04320 NONE
JCR18_RS04315  909320 ..  909335 - -10.4  -4.63527   CCACCATTTTAAAAA              CCACGC TCCT GCGTGG               TTTCTTTTTATCTAT  95 44
JCR18_RS04275  900127 ..  900145 -    -6  -3.18735   GCAAGATGTCACTAA             TGGCGATA ATT TATTGCCA             AATAGCTCAACCATT  58 423
        smpB  897238 ..  897253 -    -9  -5.93252   GTGAAAAATAAAAAA              GCCTCT ATAA AGAGGC               TTTTTAGTCTATTAC 100 37
JCR18_RS04225  893365 ..  893396 - -16.1  -4.86001   ACTATTTTATAAAAA      CAAACAGGCAAGT GATATT ACTTGCCTGTTTG       TTGGTTATTTTTAAG 100 51
JCR18_RS04220  890922 ..  890935 -  -2.3  -5.52986   ACTGCATTAAAAAAA               CGCCG TTAT CAGCA                AATGTTAATGGTCGA  80 488
JCR18_RS04210 NONE
        lolB NONE
        ispE NONE
JCR18_RS04195 NONE
JCR18_RS04190 NONE
JCR18_RS04185 NONE
JCR18_RS04180 NONE
JCR18_RS04175  885422 ..  885439 -  -9.1  -4.55287   TTTAGTGATAGAAAA             CCCCAGC CAAA GCTAGGG              TTAAGAAAAAAGCTG  90 46
        rplY NONE
         pth  884325 ..  884335 -  -5.4  -3.10761   TTTTAATAAACGAGA                 TAGC ATG GCTA                 GCGTCTCCTGAGTAG  54 152
JCR18_RS04160  883910 ..  883925 - -10.4  -5.61596   AGTCTTATAAAAAAA              GCCCGT ATTT ACGGGC               TTTTTATTATTTTTA 100 50
        ribB  880432 ..  880465 -  -6.8  -2.64462   AAGAATTATAATTTA     GAGGTTTGACCTGC AAGTGA ACAAGTCAAACCTT      TTTATTTATTTTAAA  59 36
JCR18_RS04135  878833 ..  878865 - -15.1  -3.46509   CCTCAATAATAGGAA      TATAAAAAAGGCGCT TAA AGCGCCTTTTTTATT      TATTGGTTAAAACCG 100 32
JCR18_RS04100  874363 ..  874375 -  -4.1  -3.25088   TTTCAAACTTATGAA                GCAAG TAA CTTAC                GTAGTTTTTTTGTCA  49 42
JCR18_RS04095  873677 ..  873702 - -10.6  -4.86862   GGTAAAAAATGAAAA         GTAAGTGCTT ATTCAA AAGCACTTAC          ATCACCGACACCACG 100 8
JCR18_RS04090 NONE
        scpB NONE
        rluB  871068 ..  871085 -  -8.4    -5.626   TAGGCCATAAAAAAA             CCGCTC AATTTA GAGCGG              TTTTTGATTTAAAAA 100 47
        otsB NONE
JCR18_RS04045  863734 ..  863744 -  -5.4  -4.30809   GAACATCGAGTAAAA                 CATC CTC GATG                 TTCCATAAGCTTAAA  66 44
JCR18_RS04005  852299 ..  852315 -  -5.9  -2.55351   GTTTCCGATATCAAG              CCATAAA CTT TTCATGG              GAAAAATACCTGATT  54 39
JCR18_RS04000  851535 ..  851569 - -13.1  -2.85287   AAAGAAATAAATCCA     TAAAATAAAAGGCGC ATATA GCGCCTTTTATTTTG     TTCTGTATTTTAGTC 100 35
        ccsA  849114 ..  849142 - -11.9  -5.50723   TGAGCAAAACAAAAA        CAGCGTTATAC GGGATAT GTATAACGCTG        TCTAGTAGTGCTGAA 100 53
JCR18_RS03985  848094 ..  848131 - -14.3  -2.64412   CTTAACCTGAAATAC   CAAAAGAGGGCGGTTGT TTAA ACAATCGCTCTCTTTTG    TTTGAGTGATTAAAT 100 35
JCR18_RS03945  837440 ..  837456 -  -6.6  -3.03338   AGAAGCTTGCCAAGA              CTACGT GCTTA ACGTAG              CTGAAGAATATATGA  59 91
        metG  832210 ..  832227 -  -8.4  -5.72622   GTTAGAAATAAAAAA             GCTCCC AATGTA GGGAGC              TTTTTTTATATGTAG 100 46
JCR18_RS03910 NONE
JCR18_RS03905  828752 ..  828766 -  -4.2  -3.85505   TCATCAATAACATAA               GCCG TTAAGGG CGGC               TAATTCCTCTGCGTT  56 15
JCR18_RS03900 NONE
JCR18_RS03895  826614 ..  826626 -  -4.1  -2.65388   CAGGTAAGGGATAAG                GCCTT CTA AAAGC                GGGTGAGTTATGCGT  46 33
JCR18_RS03890  825062 ..  825091 -  -7.8  -3.29144   TGATTTTTGTGATAA       GTTCGACCACTC TATATT GAGTGGTCGTTC        TGTCTTGGACAGCTA  69 251
JCR18_RS03870  822145 ..  822186 -  -9.8  -2.62958   TATTTTAAGAAAATT TTTTATGGATATGTTTAT TAATGG ACAAACATATCCATAAAC  TCACGGATCTCTGCA  74 1
JCR18_RS03860  820365 ..  820395 -   -12  -2.60075   CCGCCGCTAATGAAT       GTGAAGATCAAGCT TTA AGCCTGATCTTCAT       CGCAAAATTTTAAAA  87 9
JCR18_RS03780 NONE
JCR18_RS03775  801838 ..  801854 -    -8  -5.54885   AAGACCAATAAAAAA              GCACCT GCATA AGGTGC              TTTTTTTATTGCTTC 100 43
JCR18_RS03755  796048 ..  796072 - -11.6  -3.53811   TTTACCTCGTTTAAA          GTTGCTCTTT TTGTT AAAGAGCAAC          TTTATTGAATGTTAT  90 37
JCR18_RS03750 NONE
JCR18_RS03745  794267 ..  794284 -  -5.6   -5.7946   TTTTCAATAAAAAAA             TAGAGC TATTAG GCTCTA              TTTTTTATTTCAAGG  91 214
JCR18_RS03735 NONE
JCR18_RS03730  789136 ..  789148 -  -3.3  -3.18465   CAAGATTAAAAGAAC                GCCAT CCT AAGGC                ATTTGAAGACGCAAA  46 290
JCR18_RS03710  783725 ..  783740 - -10.4  -3.12668   TAGGTGTAGAGCCAA              GGACCC TACG GGGTCC               GTTTTTATTTGTGCT  83 55
JCR18_RS03705 NONE
JCR18_RS03695  780518 ..  780538 -  -9.1  -2.58579   TTAATGGTGGACAAC            TTTGAGAAG CAT CTTCCCAAA            ATAGCATTGGTGCTC  71 242
JCR18_RS03685 NONE
JCR18_RS03680  776945 ..  776955 -    -4  -2.83273   CTAAATGAGTAATGA                 TATC AAA GATA                 TAAAGCGAACTATTT  47 46
JCR18_RS03670  775769 ..  775810 - -13.3  -3.12351   TTTGGGTACACCTAA TTTAGCTGCCAAGAAAAGC CATT ACTTTTCTTGGCAATTAAA  TGAAAATGGACTTCA  91 101
JCR18_RS03655  771044 ..  771083 - -25.4  -4.36914   TGCTGGTGTACAAAA  CAGTAAAAAGCTGGCTTG GGAA CAAGCCAGCTTTTTACTG   TTTTGTACAAGATAA 100 111
JCR18_RS03640  767937 ..  767955 -  -3.3  -4.86731   CTTTTTGAAATAAAA             TAATTTT TATTT AAAATTA             AAATGACTGTGTCTA  66 118
JCR18_RS03635  764659 ..  764687 -    -9   -5.4505   CTCTTTAATAAAAAA        CACCTTCCAAAC TCAAG ATTTGAAAGGTG        CTTTTATAGGGGTTA 100 57
JCR18_RS03620  762302 ..  762326 -  -8.7  -3.23019   GTACAAAGTTAAAAG          GTTCTTTGAAA CCT TTACAAAGAAC          TTTCATATTCCACGT  74 122
JCR18_RS03605  757116 ..  757128 -  -6.3  -3.16921   ATCAATTGCTACTAA                TGTAC TCT GTACA                CGACAAATTTCACAG  59 35
JCR18_RS03600 NONE
JCR18_RS03595 NONE
JCR18_RS03590  754337 ..  754354 -  -4.3  -3.46167   GAACATTAATAAAAT             TAAAAAA AATG TTTTTTA              GTTGTTTTATAAACC  54 95
JCR18_RS03585 NONE
JCR18_RS03580  753188 ..  753212 -  -4.4  -3.81951   GCGTAGAGTAGGAAA          GATAGTGT GATAATCAA ACACTATC          TTATCCTGGCTAATG  58 51
JCR18_RS03560  749474 ..  749484 -  -3.2  -3.73224   TCACTTGTCATTAAA                 GCCA CAT TGAC                 ACATCTTAACTCTCA  50 435
JCR18_RS03535  744401 ..  744432 -  -7.3  -3.65902   TTTATCTCACTCAAA      TGGACTGAGTTCT GTACGA AGCGCTCAGTCCA       TTAACCATAAACTCA  70 70
JCR18_RS03525  742075 ..  742116 - -14.1  -2.68305   CTAAAAAGTAAGTTA CTCATAAAAAAAGATGCAT TCAT ATGCATCTTTTTTTCTAAG  TTTTTAAAAGTTAAG 100 36
JCR18_RS03510  737838 ..  737850 -  -2.7  -3.64822   AGGTTTGGACGTAAA                CTGAT TCA ATCAA                TAAACCTAAATAGGA  48 230
JCR18_RS03505  736402 ..  736431 -  -2.9   -3.1136   AATTGCAAGAAAGCA       CAGTACGG-AGA TTTAAGG TCAGCCGTACTG       TTTATTAAAATTTCA  45 60
JCR18_RS03500  735543 ..  735567 -  -6.5  -4.91977   CACTAAAAGAGAAAA          GGCAACATC ACCTCAA AATGTTGCC          TTTTAGAGCTTTTAT  80 37
JCR18_RS03495  734503 ..  734527 -  -4.4  -4.72272   GGTGTTTAGTAAAAA          TAAACACTAA TGGCT TAAGTGTTTA          TGAGTTCCGCACCAG  68 15
        tcuA NONE
        tcuB  731836 ..  731850 -  -7.1  -5.47159   GTTGAATATAAAAAA               CCGCT TTTAT AGCGG               TTTCTTATTAGGAAG 100 59
JCR18_RS03465  726461 ..  726485 - -10.2  -4.86621   ACGCTTAACTAAAAA          GATTGTGATT TGATT AATCACAATC          TTTTTTATGGTTATA 100 76
         add  723384 ..  723406 -  -8.4  -2.88544   GCTCAGTTGGATAGA           GCATCCGCCT TCT AAGCGGATGG           TCACAGGTTCGAATC  66 478
JCR18_RS03380  712847 ..  712866 -  -2.2  -4.59773   CTTCACCCTGAAAAA            TTTAAGCA AGCA TGTTTAAA             GGCAGGACAGCCTTT  61 155
JCR18_RS03345  707106 ..  707135 - -16.7  -4.24887   AACATATTCAACAAA       TAAAAAAGACCGC AAAA GCGGTCTTTTTTA        TTATTTAATTGATTA 100 38
JCR18_RS03310  696845 ..  696856 -  -4.4  -2.75844   TGTGGTATGCCAAAC                GACT TCAA AGTC                 TCGTTCTTTAGCAGG  48 456
JCR18_RS03245  683332 ..  683372 - -11.4   -4.3129   GATGTATGACCAAAA  TCAAGGTATTGCCTTATT ATAAG AAAAATGCAATACCTTGA  TTTGTCCTTTAATTA 100 38
        gigA NONE
        gigB NONE
JCR18_RS03230 NONE
JCR18_RS03225  680383 ..  680406 -  -5.4  -5.55698   GATAACGTAAAAAAA          TGGAGTAA TCTAAACT TTACTCCA           TCACTTAAAAATACT  87 53
JCR18_RS03220  679816 ..  679826 -  -2.6  -3.29013   ATTTTAACAAGTCAA                 TTTT GTA AAAA                 AATTGGTGATTATTT  44 35
JCR18_RS03215  679272 ..  679309 - -17.4  -3.07233   GCATAATTTGTAAGA   TATAAAAAATGCCCGA TATGAT TCGGGCATTTTTTATA    TTAAAACTTATTCAG 100 33
JCR18_RS03205 NONE
JCR18_RS03200  675920 ..  675944 - -13.7  -2.92618   TCTGTACAGAAGAAT          CAAGAGCCTAA GCT TTAGGCTCTCG          TTTTAACTCTTTTTG 100 8
        polA  670164 ..  670180 - -12.3  -5.63374   GTAAGATTAAAAAAA              GGGCTGT ATT ACAGCCC              TTTTTTATTGGTTTA 100 49
        trxA  664395 ..  664416 - -10.3  -5.45726   TATAGCCGAAAAAAA           TACGCTATA AAGG TATAGCGTA            TTTTCATCTGTAACG 100 48
         rho  662808 ..  662827 - -11.4  -5.72053   CAACCAAATAAAAAA            GGCCACTC AATA GAGCGGCC             TTTTTAGAATAAATA 100 47
JCR18_RS03145  662147 ..  662163 - -10.9  -5.28176   TTTAGCCATAAAAAA              GAGGACA AAA TGTCCTC              TTTTTTAGCTAATCT 100 51
JCR18_RS03125  657044 ..  657056 -  -3.5  -2.57564   TTATTCGTTTAGAAG                TTTTT AAT AAAAA                TCCAAGTCGCTTCTT  43 141
        nreB  653859 ..  653872 -  -6.7  -5.10933   TTATTTAAAATAAAA               GCATC CGAA GATGC                TTTATTAAAATGATT  85 44
JCR18_RS03075  647982 ..  648000 - -11.7  -5.06816   AGTTTTTAATAAAAA             GCGGCGT TAGAT ACGCCGC             TTTTTTATTTTTATA 100 50
JCR18_RS03025  640405 ..  640434 - -13.7  -2.70979   GTTTAACTAAATTGA       GAAAAAGGCCGTC AATT GACGGCCTTTTTT        ATAAGCTACTTTCTT 100 31
JCR18_RS03000  631885 ..  631902 -  -5.6  -3.71649   GCTGGAAATTGGAAA             CATGAC AGGTCA GTCATG              CCTATTTAACAACTA  59 45
JCR18_RS02995 NONE
JCR18_RS02990  630147 ..  630159 -  -2.7  -2.93207   AAGACGACCCATACA                CAAAC TCC GTTTA                TTATTGCTCTACTAC  42 26
JCR18_RS02985  629267 ..  629277 -  -2.6  -2.64274   ATGGTTCTAAATTCA                 TATA GGG TATA                 TTTTCCTGACAATTA  40 97
        rsfS  628823 ..  628852 - -13.7  -4.14541   GAGTAAGTATATAAA       CAAAAAGCGGCTC AAAA GAGCCGCTTTTTT        TAAAAGCAAAATTTT 100 39
JCR18_RS02975  627761 ..  627774 -  -8.1  -5.71712   TTTGATATAAAAAAA               CCACC TTCG GGTGG                TTTTTTATTTTTTGA 100 44
JCR18_RS02955  623626 ..  623643 -  -9.9  -3.11192   TAGATGAGTATCCAA             CCTCAAC TTAA GTTGAGG              TCAAGAGCATTTAGT  81 36
JCR18_RS02950 NONE
JCR18_RS02945 NONE
        dusA  620532 ..  620549 -  -4.8   -3.2511   CCGTATTTAGAAAAT             CACCAC CTACCT GTGGCG              TTCAGAGATACTAAT  54 299
JCR18_RS02935  619652 ..  619675 -  -3.2  -3.76611   AAAAGACTTAAAAGA          TGAGTGTTTTG TAT CAACAC-CTCA          TGCCGAAAGAGGAGG  52 328
JCR18_RS02925  618805 ..  618830 -    -9    -4.323   TTTAAATATGGAAAA         GGCATGCGCT TATGTG AGTGCATGCC          TTTTGTTTTGGGAAA  88 47
JCR18_RS02880  607951 ..  607989 - -10.4  -4.11295   CTAAATTTATATAAA   GTTCAGGCGGTTATGCTT TTA AAACATATCAACCTGAAC   ATTATATTGAACCAG  91 145
JCR18_RS02850  600207 ..  600230 - -10.4  -3.33509   TTTTAAATAATCGAA          GAGTGGTAAA AATA TTCACCACTC           TCATTTTAATTATCT  83 35
JCR18_RS02845 NONE
JCR18_RS02840 NONE
        holA  595861 ..  595881 -  -8.3  -4.19678   TGATATTTCAATAAA            GCAGGCAAA TGA TTTGGCTGC            CCTAATGTATAAATA  83 27
JCR18_RS02830 NONE
JCR18_RS02825 NONE
JCR18_RS02820  590981 ..  591002 - -10.2  -5.76633   TCAGACATAAAAAAA           GCCGTAGT TGAAGG ACTACGGC            TTTTTTACTGGGCGC 100 44
        rsgA  587331 ..  587348 -  -8.5  -3.00498   TATAGCGTATATAGA             TGGTGAT CAAA ATCACCA              CTTCAAGGGCAAATG  72 51
JCR18_RS02795 NONE
        grxC NONE
        secB  586062 ..  586076 -  -8.5  -5.93809   CTCTCATAAAAAAAA               CCGCG AATTA CGCGG               TTTTTTGAGTTTAGG 100 54
        nagZ NONE
JCR18_RS02610  552359 ..  552371 -  -3.3  -3.09933   TTTGAAGCTACTGAA                CAAGG AGT CCGTG                CCTTATTTAAACATG  46 157
JCR18_RS02600  549519 ..  549560 - -15.5  -3.90744   TTCTGTGGGAAATAA CAAAATAAAAACGCCTGAT ATGG ATCAGGCGTTTTTATTTAA  GTAGGAGACTTATTG 100 35
JCR18_RS02570  542625 ..  542639 -  -4.4  -3.87641   AATATTTGGTATAAA               TTTTTT AAG AAAAAA               GAAGTGCTGTTATTT  58 306
JCR18_RS02565 NONE
         pta  538873 ..  538897 -  -8.7  -6.28401   TAAAAAATAAAAAAA          GCCATTTGA GCGGATA TCAAATGGC          GAGAGGTAGAAAAGA 100 55
JCR18_RS02555  537148 ..  537163 - -10.4  -5.68039   AAAGGCATAAAAAAA              GCACCG AATC CGGTGC               TTTTCTTGATTAGCC 100 35
JCR18_RS02550  536226 ..  536251 -  -3.4  -5.28831   ATGAAGAAAATAAAA        TGGA-CCGTAGT GAGC AC-ACGGGTCCA         TTTATGTTAATGCAA  76 251
JCR18_RS02525  529323 ..  529354 - -13.3  -3.32893   ATAATAGTAGAAAAT      TAAAATAGCCTCT AACAAG AGAGGCTATTTTA       TATTATAAACCATAA 100 66
JCR18_RS02520  528430 ..  528442 -  -3.4  -2.72799   TGTTTAGATATACCA                CATC TAAAC GATG                ATTACACGTTGTGCA  44 190
        leuA  526406 ..  526433 - -12.9   -5.1356   TTTCAGGAATAAAAA        GAAAGGATACC AAGCTA GGTATCCTTTC         CAAAGTCTTTTTTTT 100 43
JCR18_RS02510 NONE
        metW NONE
JCR18_RS02500  523970 ..  524006 - -18.4  -5.11033   TAGAAGCTTAAAAAA    CTAAAACCACCTTATA GGTGA TATAAGGTGGTTTTAG    TCGAGTAAGTATAAG 100 49
        rdgB NONE
JCR18_RS02485 NONE
        tatB NONE
        tatC  520443 ..  520464 - -11.7  -5.36441   GTTCTACATAAAAAA           TCCTGAACT TCTT AGTTCAGGA            TTTTTTATATTATTT 100 41
JCR18_RS02470  518079 ..  518111 - -12.2  -4.65168   ATGAGACTTTAAAAA      TAAAAGAAACCTGC ATAAA GCAGGCCTCTTTTA      TAGTGTTGAAAGAAA 100 41
JCR18_RS02465  515547 ..  515566 - -12.2  -5.76237   GATAGAAATAAAAAA            TGCCGATC AAGT GATCGGCA             TTTTTCTGGGTAAAT 100 44
JCR18_RS02455  513816 ..  513833 -  -7.7  -5.31275   CTGTAGCATAAAAAA             GAGGAGC CGAA ACTCCTC              TGATTTAGATGTTAA  91 37
JCR18_RS02450 NONE
JCR18_RS02445  512907 ..  512918 -    -3  -3.62591   TGTAGAAGGTCTAAA                TATG CACG CATA                 ACACTCTCGAGTTCG  50 146
        thyA NONE
JCR18_RS02435 NONE
JCR18_RS02430 NONE
        msrA  509793 ..  509809 -  -8.7   -5.4833   TCACGTAATAAAAAA              GCAACCA ATT CGGTTGC              TTTTTTATTTTCTCA 100 45
JCR18_RS02395  504322 ..  504355 - -11.9  -4.64657   CGAAATTGGTAAAAA     CGAGGCATGATCTAGT ATA AC-AGATCATGCCTTG     ATCAGTTAACGCAAC 100 31
        rpmB NONE
        rpmG  503752 ..  503770 -  -8.9  -6.40073   AATGCAAAAAAAAAA             CGACTTC ATAAA GAAGTCG             TTTTTTTCGAGGCTA 100 44
JCR18_RS02380  501899 ..  501916 -  -9.9  -5.53288   CTTAAGTTAAAAAAA             GCGTACT CTTG AGTACGC              TTTTTTTGTATGCAT 100 40
JCR18_RS02325  491945 ..  491965 - -15.5  -4.46615   CATTACTAATTAAAA            TGGCAAGCG TTA CGCTTGCCA            TTTATTTTCAAAAGT 100 46
JCR18_RS02315  489699 ..  489717 -   -11  -5.13473   ATTATATTTAAAAAA             GCCCCCTA ATC TAGGAGGC             TTTTTAAATTAATCA 100 58
JCR18_RS02310  488891 ..  488925 -  -3.8  -4.19276   TTAAAACTGCCAAAA    GTGTATCACGAACTGA ATTTA TC-GT-CGTAATACAC    AGGAGTAAATTGAAG  60 72
JCR18_RS02305  487679 ..  487689 -  -5.4  -4.39426   TATACGTTCATAAAA                 GATG GAT CATC                 CATAGATACATCATC  69 253
JCR18_RS02300  486521 ..  486537 - -13.7  -5.44119   TTTAGTCGAAAAAAA              CCCGCGA ACA TCGCGGG              TTTTTTTATTGGGTT 100 39
         asd  482038 ..  482057 - -12.2  -4.75372   ACCAGTTACGAAAAA            GCCGATCA AATG TGATCGGC             TTTTTATTTTGACTG 100 57
JCR18_RS02280  480539 ..  480549 -  -2.6  -5.04249   CCCTTAAAAAATAAA                 TATT TGC AATA                 TAAAGCGTGCTAACT  66 52
JCR18_RS02275  479216 ..  479233 -  -9.9  -5.28176   TGCAGGCATAAAAAA             GCAGTCA TCTC TGACTGC              TTATGGTAAATCGAA 100 46
JCR18_RS02270 NONE
        truA  477402 ..  477433 - -13.2  -4.93365   CGTTAGAACTAAAAA      TTGGTTAAGCCTAC TCAG GTAGGTTTAACCAA       TGTGGCCCGAGTGGT 100 4
        infA  475861 ..  475878 -  -5.5  -5.52096   AAACGCAATAAAAAA             GCCACAT GATG AAGTGGC              TTTTTTGCATTCACT  87 43
JCR18_RS02245  474866 ..  474882 - -12.3   -5.0133   CACTTTGCTAAAAAA              CGCAGCT TAA AGCTGCG              TTTTTTTATGGTTGT 100 43
JCR18_RS02220  470346 ..  470362 -  -2.3   -3.7697   AGATTCATAATACAA              CTCTACT TGG AATAGAA              AAATCGAGAGAGGCT  50 119
JCR18_RS02215 NONE
JCR18_RS02205  468494 ..  468504 -  -5.4  -3.47751   TTTAAGAAGGCAGAA                 TCCT GAT AGGA                 TAAGGGTTCTGTGAA  58 65
JCR18_RS02195  466443 ..  466475 - -11.5  -2.65264   TTATTAGTCAGATTA      TAAAAGGCCCATTTA TCT CAAATGGGCTTTTTA      TAAAATTAGAGTTTC  86 51
JCR18_RS02145 NONE
        ptsP  456328 ..  456346 -  -6.7  -4.76892   AGATGAATTGAAAAA             GGAGAGC TTTTG ACTCTCC             TTTTTAAGTATTTAT  83 37
        katG  453647 ..  453666 - -12.2  -5.14563   TTTTGTATTAAAAAA            GCCAGTTC ATTT GAACTGGC             TTTTTATTATTTTGG 100 47
        hcaR  450838 ..  450860 -  -2.1  -4.48823   AATTAATCGATAAAA           GATATTAAA TAAAT TTTAATTTC           ATTTATTTATACATA  57 100
JCR18_RS02120  449844 ..  449854 -  -5.4  -4.81523   AATTAAAAATGAAAA                 CGAT TGA ATCG                 CACCCAGCTATTGCA  75 165
JCR18_RS02095  442798 ..  442819 - -11.7  -6.25741   AAATAACAAAAAAAA           CCTAGTCAT CGAA ATGACTAGG            TTTGTTTAAATTAGC 100 59
JCR18_RS02090  440601 ..  440617 -  -8.1  -3.45945   CTGAGCGAGAATTAA              GTAAAAC CTT GTTTTAC              TTGAATGCAGGAGAA  73 227
JCR18_RS02085 NONE
JCR18_RS02080  440383 ..  440401 - -10.3  -5.97979   ATAACAATAAAAAAA             GCCTCTC GAACT GAGAGGC             TTTTTAGAATTTGGT 100 37
JCR18_RS02070  438555 ..  438574 -  -3.5  -5.02323   GCATTATAAAGAAAA            GCCGCAC GATGAG ATACGGC             TTTTGTAATTTTAGC  69 36
JCR18_RS02060  436801 ..  436813 -  -3.3  -4.49041   ATATAAAAAATGAAA                CTAGC GTT GCAAG                GTAAGTAATACACCA  61 13
        abeM  435397 ..  435413 - -12.3  -6.14618   CATAAAATAAAAAAA              GCCGATG TTT CATCGGC              TTTTTTATTAGGTTT 100 33
JCR18_RS02040  431258 ..  431285 -   -10  -2.93854   ATAACAATTAATAAG        TCAATGTAACCC TAAA AGGCTACATTGA         TAAGTAAATTAAGTT  79 39
JCR18_RS02035  430872 ..  430905 -  -2.5  -5.72616   ATGCACATAAAAAAA     GAAGCCTAAGT GGAGGAGATGAG TCTTAGGCTTC      CAATGGTTTAAGTGT  79 64
JCR18_RS02030  430088 ..  430103 - -10.4  -3.78877   TAGCACAGCAAAACA              GCGGCA TCCA TGCCGC               TTGTCACGATAGTAA  89 281
JCR18_RS02000  426683 ..  426714 -  -4.4  -3.27901   GCTATGAAAAACAAT      TTAACCCGTTTGTC GCAA GTAAAGCGGGTTAA       TCCTCATAATCATCT  52 22
JCR18_RS01970  420333 ..  420362 - -13.7  -3.55866   CGATATGTAAATGAA       TAAAAAGCCCCGA ATAA TCGGGGCTTTTTG        TTACATCTTAGGATA 100 69
JCR18_RS01960 NONE
         lnt  417015 ..  417043 -  -9.8  -3.63707   AACAGAATTTTTAAA        TAAAACGTAGAC TCAAC ATCTACGTTTTA        TTTTTTAACTGGACT  82 455
JCR18_RS01930  412160 ..  412172 -  -3.4  -4.81249   GTGTAAAGGGAAAAA                GTGT TCTTC ACAC                CATGATATTCAAATC  66 43
JCR18_RS01925  410166 ..  410180 -   -10  -3.06302   ATCAGGCTTAGGGAA               TGCAGC GAA GCTGCA               AGCAGGACAACGGCA  81 117
JCR18_RS01920  409192 ..  409218 - -14.6  -4.19927   AAAATTATAGATAAA         TAAAAAGGCGGA TTA CCCGCCTTTTTA         TGAAGTAGGTGATTA 100 38
JCR18_RS01915  408445 ..  408473 -  -3.8  -5.13722   GCGAGCAAAATAAAA        GAGACATAGAAC GGTGA GAGCTATGCCTC        TCATTGTTTAAATGA  74 33
JCR18_RS01910 NONE
JCR18_RS01905  406963 ..  406973 -  -3.2  -2.64735   ATCTGATTGATACCA                 CGCA GGT TGCA                 GATGGCTTTCCAGGC  42 85
JCR18_RS01885  401315 ..  401334 - -12.2  -4.61231   CTACAGCGCCAAAAA            CCCAAGCA GAAA TGCTTGGG             TTTTTTATTTTGCCG 100 56
JCR18_RS01865  390733 ..  390761 -  -8.9  -4.15006   AGAGCTATTTTAAAA        CAGCTGAGAGC AGATTAA ACTCTCAGCCG        TAAGTTAGATTTTAG  85 37
JCR18_RS01855  388375 ..  388394 -    -5  -3.48027   TATAATGAATAAAAT            CTCAACTT CGTG AGGTTGAG             TTTTTTCTATGTGCC  56 48
        ubiE NONE
JCR18_RS01845 NONE
JCR18_RS01840  384981 ..  385000 - -12.2  -5.64274   TTACCCATAAAAAAA            TCCCTTGC ATGG GCAAGGGA             CTTGGAAGTTATTTC 100 34
JCR18_RS01835  383550 ..  383568 -  -2.4  -2.73364   CTCCTAGCGTAATGA             GCAGCT TGTACTC AGCTAC             TTTTAAAAATCAGCC  40 28
JCR18_RS01830 NONE
JCR18_RS01825 NONE
JCR18_RS01820  379532 ..  379552 -  -5.5   -4.0683   AAATAAAGCGAGAAA            CAAGTTG TATTGCG CAACTTG            AATAATAAAAACGCA  64 199
JCR18_RS01815  376562 ..  376583 -  -3.7  -2.66593   AGAATTCTAAACTGA           TCATGATGA TTTC TCCCCATGA            GGTACAGGACCAGAC  44 4
JCR18_RS01810 NONE
JCR18_RS01805 NONE
JCR18_RS01800 NONE
JCR18_RS01795 NONE
JCR18_RS01790  373124 ..  373153 - -16.7  -4.52505   AATAAAAACTCAAAA       TAAAAAAGCCACC TTGG GGTGGCTTTTTTA        TGTGTTCAAGTTTTT 100 39
        pilB NONE
JCR18_RS01735 NONE
JCR18_RS01730 NONE
JCR18_RS01725  361344 ..  361363 -  -4.2  -3.18264   TTGGTGAGTCATTAA            GCCCATCA ATTG TAGTGGGC             TTAGTCGGTATGGGA  48 118
        recN NONE
JCR18_RS01695 NONE
        ruvX  355016 ..  355032 -  -9.5  -5.52096   AAACTCAATAAAAAA              GCATGTT TGA AACATGC              TTTTTTATTTTATGG 100 35
JCR18_RS01670  350212 ..  350232 -  -6.1   -5.4505   TTGGGCAAGAAAAAA            GCCCATGAT GGC AACATGAGC            TTATTCCTCTGAGGG  88 170
JCR18_RS01635  343660 ..  343673 -  -9.5  -2.93853   GTGTTTTAATGAAAG               CGCCC GAAA GGGCG                TTTTTTGTTTTAAGC  75 353
        fadB NONE
        fadA  338790 ..  338808 - -11.7  -5.61596   AGGTCGATAAAAAAA             TCCCCGC ACATA GCGGGGA             TTTTTTTATCTTGGT 100 46
JCR18_RS01610  337231 ..  337266 - -14.3  -2.55034   AAATGTTAGAAAATT    GAT-AAAAATCCCCGC ATTGA GCGGGGATTTTTTATC    TTTACTGAAATTTGT 100 60
JCR18_RS01600  335790 ..  335801 -    -3  -3.10464   GTATCAATCCGAATA                TGAA AAAA TTCA                 TAAAACCTTCTTGGC  44 374
JCR18_RS01590  334287 ..  334304 -  -8.4  -5.95166   TTTAAGCAAAAAAAA             TCCCCC AAACTA GGGGGA              GTTTTTGATCAAGGA 100 210
JCR18_RS01585  332921 ..  332938 -  -2.1  -3.52963   TTGTAAGAAGAAAAG             CTTAAAT TTTT ATTTAAA              AGTATTTTATTATTC  46 78
JCR18_RS01580  331900 ..  331919 -  -7.8   -5.0916   TTTGCAATAGAAAAA            GCCTCTGA ATTA TCAGGGGC             TTTTTTGTGGATAAA  89 73
JCR18_RS01550  325384 ..  325403 - -12.2  -5.01042   AAGTGAAATGAAAAA            TAAGCGCC TTCA GGCGCTTA             TTTTATTAGTAGAAG 100 15
        argH NONE
JCR18_RS01390  294302 ..  294327 - -12.7  -5.47218   TTTCACGTAAAAAAA         GGCAGGTCTAT GTAT ATAAACCTGCC          TTTTTTAAAATGATG 100 57
JCR18_RS01365 NONE
        thiC  286903 ..  286957 -  -3.3  -3.21924   GGACGCTCGACAATA CTCATGATT--CGATCAGGACGAAAT CTATTT ATTTCATCCTAACCGAGAATCATG-G CTAGGCAAGTGTTTT  48 51
JCR18_RS01355 NONE
        cpdA  285334 ..  285351 -  -9.9  -2.52775   TTTATAGAAAACCAT             CGATGGA TTTT TCCATCG              GGTCGTCATCATATA  77 138
        dksA NONE
      gluQRS  283753 ..  283771 - -10.3   -4.8543   GAAGCGTTATAAAAA             GCCCGAT ATCAA ATCGGGC             TTTTTATTATTTATA 100 36
        xerD  277559 ..  277569 -  -2.4  -3.58247   TTTAAAAAAATTTAA                 CCCC TAG GGTG                 ATGTTTTTCATGCAA  48 11
JCR18_RS01305  276409 ..  276423 -  -7.8  -5.83822   CATAGCTAAAAAAAA               CGCCAG ACT CTAGCG               CTTTTAGCGCCTGTT 100 196
JCR18_RS01300 NONE
JCR18_RS01295  273804 ..  273840 -   -14  -3.39483   ATGCCATTTAAAAAG    CATAAAAAACGGCTGT ATTAA ACAGCCGCTTTTTATA    AAAACTCAGATTTTA 100 38
JCR18_RS01285 NONE
JCR18_RS01280  270273 ..  270285 -  -4.9  -4.07495   ACCTAATAAAAAAAT                CAATA TAT TATTG                GGCATTCTATTCTGA  62 12
JCR18_RS01275  268815 ..  268835 -  -3.3  -4.56775   ATCTCCTTCTAAAAA            GAAAGTAAA TTT TATACTTCC            TGTTCTGTCTCCGTA  63 16
JCR18_RS01250 NONE
JCR18_RS01245 NONE
JCR18_RS01240  261077 ..  261092 -  -6.2   -3.9941   TTTGTGACAATTAAA              TGTCAT TTTG ATGACA               GGAAGAATATTAAAA  68 43
JCR18_RS01235  260728 ..  260744 -  -5.1  -6.09196   GCCAAAATAAAAAAA              CCGGA CATACGT TCCGG              TTTTTTATTTTAAAA  93 42
JCR18_RS01200 NONE
JCR18_RS01195  253690 ..  253700 -  -2.6  -2.95448   ATTAACAGGCATATA                 TTTT TAC AAAA                 TGAAAAATTAAAGCT  42 94
JCR18_RS01190  251835 ..  251858 -  -6.2  -4.59081   CAAATTTATAGAAAA          CATGAAA-TAC CAA GTAATTTCATG          AACATATGATTGTAT  76 57
JCR18_RS01185 NONE
JCR18_RS01180  249208 ..  249238 -    -7  -4.77759   ATAACTTATTAAAAA       TAAAGGGATAGA TCAAAAT TCTACCCCTTCA       TGAAATTATCGTAGT  83 31
JCR18_RS01175 NONE
JCR18_RS01170  248075 ..  248102 - -11.5  -4.23892   TTGAAGCACTTAAAA        TAATGATCAGC GAGTTA GCTGATCATTA         TTATTGAGATTTCAG 100 356
JCR18_RS01150  243958 ..  243978 - -11.9  -4.43307   CTCTTAATAAAAGAA            CAGCGGACT TAT AATCCGCTG            TTTTATTTTAAGAGT 100 33
JCR18_RS01140 NONE
JCR18_RS01135  240731 ..  240748 -  -9.1   -5.0133   TAGGGTTTTAAAAAA             GCGGGTC AATA AACCCGC              TTTTTTATTAGTTTT  95 33
JCR18_RS01125  237609 ..  237632 -  -3.8   -5.4505   GGGCTTAATAAAAAA          CCTACCTGTG TGAC CAGAGGTAGT           TTTTTTTATGCTTGA  77 53
JCR18_RS01110  235986 ..  235999 -  -9.5  -5.52023   ATGATGAATAAAAAA               GCGCC GTAA GGCGC                TTTTTTTATTTTAAT 100 36
JCR18_RS01075  226413 ..  226426 -  -8.1  -6.14618   GATAAAATAAAAAAA               GCGGA AGAA TCCGC                TTTTTTGTTGAGGTA 100 47
        mdtD  224804 ..  224834 -  -5.5  -2.64973   ATGAAGTTCACATCA      TAGCGTGA-TTCGC GAGC GAGAAACCACGCTA       AAAATGCAACTGCTT  52 39
JCR18_RS01065 NONE
        dinB  222928 ..  222951 -  -6.2  -3.04398   GTTTTTGTTTAAAAC          TTGTTCTTTT GTAT AAAAAAACAA           CACTTACCATAAGGA  59 29
JCR18_RS01055  222224 ..  222251 -  -7.1   -5.4588   TAAAAGTATAAAAAA        TGAGCAATATC GATCAT GATCTTGCTCA         GTTTTTTTATTAATT 100 55
JCR18_RS01030 NONE
JCR18_RS01025  215553 ..  215587 -   -13  -3.68351   TTTGTATTATTGAAA     TGAAAAAACCCCGACA TCC TGTCGAGGTTTCTTCG     TATTCAGCTTTATGT 100 205
JCR18_RS01020  214809 ..  214840 - -13.3  -3.02386   ATAAAATTAACCATA      TAAAAAAGCCCAT GAATAA ATGGGCTTTTTTA       TTTAATCTTAATTTA 100 38
JCR18_RS00975  205095 ..  205119 -  -4.2   -4.1964   CTTAATAGTTGAAAA          TGGAAGTCTG GATAA CGGGCTTCCA          TTTTTTGCTTTTTTA  60 51
JCR18_RS00950 NONE
        dprA NONE
JCR18_RS00940  198503 ..  198517 -    -5  -2.98823   TTCGTTCCAGAGATA               TCCAAA CCC TCTGGA               TGTGGTATATACCCA  52 94
JCR18_RS00925 NONE
JCR18_RS00920 NONE
JCR18_RS00915  193673 ..  193690 - -11.3  -5.60689   GTAGACAATAAAAAA             GGAGTGC TATA GCACTCC              TTTTATTAGTTTGAT 100 48
JCR18_RS00910  192929 ..  192944 - -10.4  -4.70659   TTCGAGATTGAAAAA              GCCACC TTTC GGTGGC               TTTTTTTATTGCTAA  95 49
JCR18_RS00855 NONE
JCR18_RS00850 NONE
JCR18_RS00845  182522 ..  182540 -  -8.1   -3.1505   AGTACGGTCCATCAA             GCAGCCT GATTT AGGCCGC             TTGAGTTTGATTTTT  70 17
JCR18_RS00835  180798 ..  180815 - -11.3  -4.22338   ATGAGAATGTGAAAA             GAGGAGC TTAA GCTCCTC              TTTTTTTCTTTTAAG 100 36
JCR18_RS00825  176758 ..  176785 -  -8.4  -3.41745   TTCTTACAACATGAA        GGGGTATATGGC TTTG ACCAAACACCCC         AACACTAACTTACAT  73 35
JCR18_RS00820  175979 ..  175996 -  -8.5  -5.24647   ATATATAAAAGAAAA             GGAACAA ATAT TTGTTCC              TTTTTTATTGCTTAA  95 44
JCR18_RS00780  168500 ..  168520 - -11.2  -5.56372   AAAGCAAAATAAAAA            CCGGATGA TTCAT TCATCCGG            TTTTTTTATATTTAA 100 44
JCR18_RS00770  167123 ..  167150 - -10.6  -5.25976   AATGAAAAAAATAAA        GGCCGATCATCT ATAT AAAGGATCGGCC         ATGTTACTTATTTTA 100 82
JCR18_RS00740 NONE
JCR18_RS00735  163904 ..  163927 - -11.8  -5.52079   AGATCAAAAGAAAAA          GGCACTTACC TTTC GATAAGTGCC           TTTTGAATTTGGAGC 100 35
JCR18_RS00680 NONE
        abaI  144063 ..  144099 - -11.7  -4.66163   ATTGCTATGTAAAAA    TTAGGACTCATGCCC CAATGAT AGGCATGAGTCCTAT    ATAAGAAATTAGATA 100 34
JCR18_RS00635  134343 ..  134360 -  -9.9  -3.97947   TCGATTTACCAGAAA             GCCAATC ATAT GATTGGC              TTTTTATTTATTATT  90 40
JCR18_RS00605  127466 ..  127500 -  -4.7   -3.5394   AAATGGTTCTCGAAA    TTTAAACATCAAAATA AACA TATTTCGAT-TTTAAA     ATATTTCTAATTTTC  56 76
JCR18_RS00595  124161 ..  124178 - -11.3  -4.18197   ATGTTTTAGTGAAAA             GCCCGAA ACTA TTCGGGC              TTTTTTATTTTATAG 100 46
JCR18_RS00570  120235 ..  120262 -   -10  -3.55528   AATTGTAAAAATATA        GAAGAAGCGTAA TTTA TTACGCTTTTTC         TCTCATTAGAAATAG  84 42
JCR18_RS00545  113584 ..  113605 - -10.9  -4.19483   CGACACAGAGATAAA           GAGCTAAGC CAAC GCTTAGCCC            AGACTACTTTTGTCA 100 19
JCR18_RS00495  103357 ..  103372 -  -4.8  -3.83816   AGAAATTAAGGTAAA              TAGAAA CTAA TTTCTA               ACACATGCTTTCATT  60 159
JCR18_RS00490  101918 ..  101947 - -16.7   -2.9518   CGTAATATCGAGACA       TAAAAAAAGGCGC CGAA GCGCCTTTTTTTA        TAGATGATTTATGCA 100 34
JCR18_RS00465   94545 ..   94573 - -11.9  -4.02535   CTATAACTAAGTAAA        TAAAAAAGGAGCA AAT CGCTCCTTTTTCA        TTTTTAATTAGTTCT 100 33
JCR18_RS00370 NONE
JCR18_RS00365 NONE
JCR18_RS00360   70386 ..   70403 - -11.3  -5.74086   AAAGCAAATAAAAAA             CCGGATC ATTT GATCCGG              TTTTTTATGAAGAGT 100 46
JCR18_RS00355   69477 ..   69500 - -11.1  -5.75945   ATTTTCCAAAAAAAA          CAGGAGAGT ATAACG ACTCTCCTG           GATTGTTATTATTTC 100 34
JCR18_RS00350   68727 ..   68744 -    -7  -5.83211   CACTAAAATAAAAAA             GCGATC AATTTA GATCGC              TTTTTTTATCTTCGA 100 44
JCR18_RS00335   65059 ..   65092 - -15.7  -3.03151   TCGCCCAAAGTAAAG     TACGTAATAAAGATT AATT AATCTTTATTACGTA      TCGAAAGACAACAGT 100 441
JCR18_RS19645   59319 ..   59342 -  -6.8   -3.9777   GTGAACACTTATAAA          TATAGTGTAC ATAT GTTCACTATA           CGAACATGTGTTCAC  71 489
JCR18_RS00305   58494 ..   58507 -  -3.9  -4.57073   TACTTCCTGTAAAAA               GAAAA AGAC TTTTC                TCGAAATTTTCGCCT  66 97
JCR18_RS00300   57737 ..   57754 - -11.3  -4.57569   TTATTGCTTTAAAAA             GGGCTTC ATAA GAAGCCC              TTTTTTATAAAATTT 100 66
JCR18_RS00290 NONE
JCR18_RS00285 NONE
JCR18_RS00280   54614 ..   54647 -  -5.3  -5.64873   CTCAATAATAAAAAA     GGCTTGTATATATCT TTTC AGGTATAGCCAAGCC      AGATGTGATGATCGG  90 75
JCR18_RS00275   54011 ..   54034 - -10.4  -5.69068   TAAAAATACAAAAAA          GGATAAAGCC GATC AGCTTTATCC           TTTCCTACTAAGCGA 100 60
JCR18_RS00270   53487 ..   53507 - -12.7  -5.71712   TTTTAGATAAAAAAA            CACCCAAAT TAG ATTTGGGTG            TTAGATGTTTTATGA 100 43
        argA   51964 ..   51998 -  -5.9  -5.54264   AAAGATTTAAAAAAA     GTACAACCATACA TTAATTACC TTTATGGTTGTAC     TTTTTAGACTAAGCT  93 76
JCR18_RS00260   50703 ..   50736 -  -6.7  -3.65812   GTTCCCTTAACACAA     GGCACAGCATTTATA TCGT TATTTAAGCTGTGCC      CAAGCTGGGTTTATT  67 36
JCR18_RS00255   49695 ..   49708 -  -3.1   -2.9462   TATCTATTGAAATTA               CTTGG CACC CCAAA                CAGCTTGTTTAATGC  43 9
JCR18_RS19555 NONE
JCR18_RS19550 NONE
        ssuD NONE
JCR18_RS19545 NONE
JCR18_RS19540 NONE
        ssuC   47709 ..   47720 -  -3.6  -3.30124   CTTTATTTTTGATAA                CCGG CATG CCAG                 CGTAGTAAATAACGT  48 1
JCR18_RS00240   46805 ..   46832 -   -10  -5.00616   CTTCGCCCTAAAAAA        GAGCAATAAATC ATCA GTTTTATTGCTC         GTTAATTGGGCATTT 100 75
JCR18_RS19530 NONE
JCR18_RS00235 NONE
JCR18_RS19525   45713 ..   45723 -  -6.8  -3.58536   AAATTCATCTCCAAA                 CGCA TTT TGCG                 GATTTACCAAAAGGA  67 176
JCR18_RS19515 NONE
        ribF NONE
        ileS NONE
        lspA NONE
JCR18_RS00205   39049 ..   39064 - -10.4  -6.01369   TAAATAATAAAAAAA              GCCCTC AATC GAGGGC               TTTTTTTACATGATC 100 31
JCR18_RS00200   37888 ..   37915 - -14.2  -3.62096   GCTCATTATTCTAAA        CACCCCAATCTC AAAA GAGGTTGGGGTG         TTTTTTTATATGGGA 100 503
JCR18_RS00155   29791 ..   29817 -  -4.5  -5.75945   ATTCCTCAAAAAAAA        GCCCCAAGAG ACTTATTG CT-TTGGGGC         TTTTTATATAGAAGT  95 48
        grpE   26382 ..   26394 -  -3.5  -2.70932   GGTTTTTTTCAAGCA                TTTTT ATG AAAAA                AAATCAAAAAACTCT  44 87
        dnaK   24317 ..   24351 - -15.3  -3.53811   GTTATTTTTTGTAAA    TAATAAAAGACCGCGC CTTC GCGCGGTCTTTT-TTA     AAGAGACAAATTATT 100 36
JCR18_RS00125   23013 ..   23034 - -10.3  -4.40572   ACAATTTCGACAAAA           TAATGAGAC TTGT GTCTCATTA            TTTTTTACCAAATGC  95 105
JCR18_RS19400 NONE
JCR18_RS19395 NONE
JCR18_RS00120   21971 ..   22005 - -14.6  -2.55668   GACTTTGACATGAAT     TTCGATGTATCTATTT ATA AAATAGATACATCGTA     TGAGTTCAGTATCTA 100 42
JCR18_RS00115   21487 ..   21532 - -23.1  -4.69656   AATGATGCAATAAAA TATTCAATAAAAAAGGTCTGC ATAT GCAGACCTTTTTTATTGAACA GCTAAACTATAGATT 100 27
JCR18_RS19385   20424 ..   20440 -    -3  -3.38683   ATACGCAAAATTTAA             CACC-AG ATTA CTCGGTG              ATTGATAAGTTAAAT  48 106
JCR18_RS19380   20031 ..   20071 -  -4.4  -3.72893   CATCTTGTGAGGAAA  GTTTTAAATTCAAA AATAGAGGGGAAA TTTGAATTTAAAAC  TCTGGAAATGAATTT  56 135
JCR18_RS19375   19490 ..   19508 -  -2.4  -2.65521   TGGATAGTAATGAAT             TGACGA ATTTATG CCGTCA             GTTAGCGAAAATTTT  40 23
JCR18_RS19370   19053 ..   19064 -  -2.2  -3.08211   ATTGGCTGAAAACCA                CCAT CACA ACGG                 TATTTTGTCGCACTC  42 174
JCR18_RS19365   18400 ..   18411 -  -4.4  -4.04319   GCACAAACTGATAAA                GTTG CAAG CAAC                 AATATTCCGGGACAG  60 17
JCR18_RS19360   17942 ..   17958 -  -2.9  -3.09273   CGGTCGCAACAGATA              CCCAACC TTT AGTCGGA              ATTATCATGGGTTCC  45 106
         mpl   15694 ..   15745 -   -15  -5.04987   AACAGGTTTAAAAAA TAATTAAACTAAAAAACGGGTTTCA ATT TGAAACCCGTTTTTTA-TTGAATCA TCTGGAGCGAAAGTT 100 39
JCR18_RS00080   13552 ..   13565 -  -3.9  -2.90941   ACGATATCTGACACA               TAACA TTGC TGTTA                TGTTTGGAGGAGGCT  47 167
JCR18_RS00075   12395 ..   12421 -   -11   -3.5518   TGAAGATTTAGATAA         CAAGGCATCT TACATGT AGATGCCTTG         TTGTGATGAATTAGG  87 36
JCR18_RS00070 NONE
JCR18_RS00065 NONE
JCR18_RS19335   10426 ..   10448 -  -7.1  -5.75945   ACTCCTTAAAAAAAA          TTA-GGGCTC TGAC GAGCCCCTAA           AATCTAGGCTTTTTT 100 216
JCR18_RS00060 NONE
        guaD    7791 ..    7809 -  -8.9  -6.07374   AGAAAAAATAAAAAA             GGTGTTG ACCAG CAACACC             TCGAAAATCTGAGTT 100 183
         hpt    7195 ..    7212 -  -7.7  -5.71712   CTTTATATAAAAAAA             TAGCACC TTGC GGTGCCA              TTTTTATAAAATTTA 100 38
JCR18_RS00045    6764 ..    6777 -  -8.1  -5.49729   AATGACTTAAAAAAA               GCACC GTTC GGTGC                TTTTTTAAAATTAAA 100 49
JCR18_RS00030    4603 ..    4632 -  -7.9  -5.77677   GAAAATAATAAAAAA       CTGGATGATGTAG AGTG CTATGTCATCCAG        TACTTTTCTCAGCCG 100 34
JCR18_RS19280 NONE
JCR18_RS19275    3712 ..    3728 -  -8.1  -3.54195   CAACAAAAATTAATA              CAGTTTT AGA AAAACTG              ATTCATTTACGTCTG  73 106
JCR18_RS19270    3173 ..    3200 - -11.4  -3.33696   CTTTTGCTGAATCAA        TCCGCTTAAGAT GGTA ATCTTAGGCGGA         TTTTTCTTTGACTGT  88 270
