RR41_RS00120	PWY-6825	phosphatidylcholine biosynthesis V
RR41_RS00130	PWY-5101	L-isoleucine biosynthesis II
RR41_RS00130	PWY-5103	L-isoleucine biosynthesis III
RR41_RS00130	PWY-5104	L-isoleucine biosynthesis IV
RR41_RS00130	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RR41_RS00155	PWY-1622	formaldehyde assimilation I (serine pathway)
RR41_RS00155	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
RR41_RS00155	PWY-5913	TCA cycle VI (obligate autotrophs)
RR41_RS00155	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RR41_RS00155	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
RR41_RS00155	PWY-6549	L-glutamine biosynthesis III
RR41_RS00155	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
RR41_RS00155	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RR41_RS00155	PWY-7124	ethylene biosynthesis V (engineered)
RR41_RS00190	PWY-2941	L-lysine biosynthesis II
RR41_RS00190	PWY-2942	L-lysine biosynthesis III
RR41_RS00190	PWY-5097	L-lysine biosynthesis VI
RR41_RS00290	PWY-6123	inosine-5'-phosphate biosynthesis I
RR41_RS00290	PWY-6124	inosine-5'-phosphate biosynthesis II
RR41_RS00290	PWY-7234	inosine-5'-phosphate biosynthesis III
RR41_RS00300	PWY-2941	L-lysine biosynthesis II
RR41_RS00300	PWY-2942	L-lysine biosynthesis III
RR41_RS00300	PWY-5097	L-lysine biosynthesis VI
RR41_RS00355	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
RR41_RS00380	PWY-5028	L-histidine degradation II
RR41_RS00380	PWY-5030	L-histidine degradation III
RR41_RS00385	PWY-5028	L-histidine degradation II
RR41_RS00385	PWY-5030	L-histidine degradation III
RR41_RS00395	PWY-5028	L-histidine degradation II
RR41_RS00395	PWY-5030	L-histidine degradation III
RR41_RS00415	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RR41_RS00415	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RR41_RS00420	PWY-6749	CMP-legionaminate biosynthesis I
RR41_RS00425	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
RR41_RS00425	PWY-5667	CDP-diacylglycerol biosynthesis I
RR41_RS00425	PWY-6453	stigma estolide biosynthesis
RR41_RS00425	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
RR41_RS00425	PWY-7587	oleate biosynthesis III (cyanobacteria)
RR41_RS00430	PWY-5269	cardiolipin biosynthesis II
RR41_RS00430	PWY-5668	cardiolipin biosynthesis I
RR41_RS00435	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
RR41_RS00435	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
RR41_RS00435	PWY-6896	thiamin salvage I
RR41_RS00435	PWY-6897	thiamin salvage II
RR41_RS00445	PWY-6167	flavin biosynthesis II (archaea)
RR41_RS00445	PWY-6168	flavin biosynthesis III (fungi)
RR41_RS00450	PWY-6167	flavin biosynthesis II (archaea)
RR41_RS00450	PWY-6168	flavin biosynthesis III (fungi)
RR41_RS00450	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
RR41_RS00480	PWY-5381	pyridine nucleotide cycling (plants)
RR41_RS00485	PWY-5350	thiosulfate disproportionation III (rhodanese)
RR41_RS00490	PWY-5669	phosphatidylethanolamine biosynthesis I
RR41_RS00495	PWY-6857	retinol biosynthesis
RR41_RS00545	PWY-6840	homoglutathione biosynthesis
RR41_RS00545	PWY-7255	ergothioneine biosynthesis I (bacteria)
RR41_RS00610	PWY-6749	CMP-legionaminate biosynthesis I
RR41_RS00615	PWY-6614	tetrahydrofolate biosynthesis
RR41_RS00715	PWY-5694	allantoin degradation to glyoxylate I
RR41_RS00715	PWY-5705	allantoin degradation to glyoxylate III
RR41_RS00720	PWY-5697	allantoin degradation to ureidoglycolate I (urea producing)
RR41_RS00740	PWY-5691	urate degradation to allantoin I
RR41_RS00740	PWY-7394	urate degradation to allantoin II
RR41_RS00745	PWY-5691	urate degradation to allantoin I
RR41_RS00745	PWY-7394	urate degradation to allantoin II
RR41_RS00800	PWY-5686	UMP biosynthesis
RR41_RS00825	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
RR41_RS00825	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
RR41_RS00825	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
RR41_RS00825	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
RR41_RS00830	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RR41_RS00830	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RR41_RS00835	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RR41_RS00835	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RR41_RS00855	PWY-2201	folate transformations I
RR41_RS00855	PWY-5497	purine nucleobases degradation II (anaerobic)
RR41_RS00870	PWY-6891	thiazole biosynthesis II (Bacillus)
RR41_RS00870	PWY-6892	thiazole biosynthesis I (E. coli)
RR41_RS00870	PWY-7560	methylerythritol phosphate pathway II
RR41_RS00905	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
RR41_RS00905	PWY-6596	adenosine nucleotides degradation I
RR41_RS00905	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
RR41_RS00910	PWY-6749	CMP-legionaminate biosynthesis I
RR41_RS00915	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
RR41_RS00915	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
RR41_RS00945	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
RR41_RS00950	PWY-2201	folate transformations I
RR41_RS00965	PWY-6672	<i>cis</i>-genanyl-CoA degradation
RR41_RS00965	PWY-7118	chitin degradation to ethanol
RR41_RS00985	PWY-7723	RR41_RS00985
RR41_RS01065	PWY-6899	base-degraded thiamin salvage
RR41_RS01065	PWY-7356	thiamin salvage IV (yeast)
RR41_RS01145	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
RR41_RS01300	PWY-702	L-methionine biosynthesis II
RR41_RS01400	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
RR41_RS01400	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RR41_RS01400	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
RR41_RS01400	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RR41_RS01410	PWY-5344	L-homocysteine biosynthesis
RR41_RS01410	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
RR41_RS01495	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RR41_RS01510	PWY-2201	folate transformations I
RR41_RS01530	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RR41_RS01530	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RR41_RS01535	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
RR41_RS01535	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
RR41_RS01535	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
RR41_RS01580	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RR41_RS01585	PWY-6164	3-dehydroquinate biosynthesis I
RR41_RS01665	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
RR41_RS01720	PWY-6829	tRNA methylation (yeast)
RR41_RS01720	PWY-7285	methylwyosine biosynthesis
RR41_RS01720	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
RR41_RS01805	PWY-6854	ethylene biosynthesis III (microbes)
RR41_RS01995	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RR41_RS02000	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RR41_RS02000	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RR41_RS02005	PWY-6168	flavin biosynthesis III (fungi)
RR41_RS02005	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
RR41_RS02010	PWY-6891	thiazole biosynthesis II (Bacillus)
RR41_RS02010	PWY-6892	thiazole biosynthesis I (E. coli)
RR41_RS02010	PWY-7560	methylerythritol phosphate pathway II
RR41_RS02105	PWY-5667	CDP-diacylglycerol biosynthesis I
RR41_RS02105	PWY-6453	stigma estolide biosynthesis
RR41_RS02105	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
RR41_RS02105	PWY-7587	oleate biosynthesis III (cyanobacteria)
RR41_RS02415	PWY-7731	RR41_RS02415
RR41_RS02465	PWY-1622	formaldehyde assimilation I (serine pathway)
RR41_RS02465	PWY-5392	reductive TCA cycle II
RR41_RS02465	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RR41_RS02465	PWY-5690	TCA cycle II (plants and fungi)
RR41_RS02465	PWY-5913	TCA cycle VI (obligate autotrophs)
RR41_RS02465	PWY-6728	methylaspartate cycle
RR41_RS02465	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RR41_RS02465	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
RR41_RS02465	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RR41_RS02495	PWY-5669	phosphatidylethanolamine biosynthesis I
RR41_RS02580	PWY-7294	xylose degradation IV
RR41_RS02580	PWY-7295	L-arabinose degradation IV
RR41_RS02925	PWY-6700	queuosine biosynthesis
RR41_RS02945	PWY-6700	queuosine biosynthesis
RR41_RS02965	PWY-5057	L-valine degradation II
RR41_RS02965	PWY-5076	L-leucine degradation III
RR41_RS02965	PWY-5078	L-isoleucine degradation II
RR41_RS02965	PWY-5101	L-isoleucine biosynthesis II
RR41_RS02965	PWY-5103	L-isoleucine biosynthesis III
RR41_RS02965	PWY-5104	L-isoleucine biosynthesis IV
RR41_RS02965	PWY-5108	L-isoleucine biosynthesis V
RR41_RS03005	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
RR41_RS03100	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RR41_RS03100	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
RR41_RS03100	PWY-6268	adenosylcobalamin salvage from cobalamin
RR41_RS03100	PWY-6269	adenosylcobalamin salvage from cobinamide II
RR41_RS03145	PWY-4381	fatty acid biosynthesis initiation I
RR41_RS03145	PWY-5743	3-hydroxypropanoate cycle
RR41_RS03145	PWY-5744	glyoxylate assimilation
RR41_RS03145	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RR41_RS03145	PWY-6679	jadomycin biosynthesis
RR41_RS03145	PWY-6722	candicidin biosynthesis
RR41_RS03145	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RR41_RS03150	PWY-2161	folate polyglutamylation
RR41_RS03215	PWY-1361	benzoyl-CoA degradation I (aerobic)
RR41_RS03215	PWY-5109	2-methylbutanoate biosynthesis
RR41_RS03215	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
RR41_RS03215	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
RR41_RS03215	PWY-5177	glutaryl-CoA degradation
RR41_RS03215	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RR41_RS03215	PWY-6435	4-hydroxybenzoate biosynthesis V
RR41_RS03215	PWY-6583	pyruvate fermentation to butanol I
RR41_RS03215	PWY-6863	pyruvate fermentation to hexanol
RR41_RS03215	PWY-6883	pyruvate fermentation to butanol II
RR41_RS03215	PWY-6944	androstenedione degradation
RR41_RS03215	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
RR41_RS03215	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
RR41_RS03215	PWY-7007	methyl ketone biosynthesis
RR41_RS03215	PWY-7046	4-coumarate degradation (anaerobic)
RR41_RS03215	PWY-7094	fatty acid salvage
RR41_RS03215	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
RR41_RS03215	PWY-735	jasmonic acid biosynthesis
RR41_RS03215	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
RR41_RS03215	PWY-7606	docosahexaenoate biosynthesis III (mammals)
RR41_RS03215	PWY-7726	RR41_RS03215
RR41_RS03245	PWY-6683	sulfate reduction III (assimilatory)
RR41_RS03295	PWY-6825	phosphatidylcholine biosynthesis V
RR41_RS03575	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RR41_RS03660	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
RR41_RS03675	PWY-901	methylglyoxal degradation II
RR41_RS03945	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
RR41_RS03950	PWY-5194	siroheme biosynthesis
RR41_RS03950	PWY-5441	S-methyl-L-methionine cycle
RR41_RS03950	PWY-702	L-methionine biosynthesis II
RR41_RS03950	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
RR41_RS03955	PWY-6004	glycine betaine biosynthesis V (from glycine)
RR41_RS03985	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
RR41_RS03985	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
RR41_RS04035	PWY-3781	aerobic respiration I (cytochrome c)
RR41_RS04035	PWY-4302	aerobic respiration III (alternative oxidase pathway)
RR41_RS04035	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RR41_RS04035	PWY-5690	TCA cycle II (plants and fungi)
RR41_RS04035	PWY-6728	methylaspartate cycle
RR41_RS04035	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RR41_RS04035	PWY-7254	TCA cycle VII (acetate-producers)
RR41_RS04035	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RR41_RS04040	PWY-3781	aerobic respiration I (cytochrome c)
RR41_RS04040	PWY-4302	aerobic respiration III (alternative oxidase pathway)
RR41_RS04040	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RR41_RS04040	PWY-5690	TCA cycle II (plants and fungi)
RR41_RS04040	PWY-6728	methylaspartate cycle
RR41_RS04040	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RR41_RS04040	PWY-7254	TCA cycle VII (acetate-producers)
RR41_RS04040	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RR41_RS04045	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
RR41_RS04050	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
RR41_RS04055	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
RR41_RS04055	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
RR41_RS04060	PWY-5392	reductive TCA cycle II
RR41_RS04060	PWY-5537	pyruvate fermentation to acetate V
RR41_RS04060	PWY-5538	pyruvate fermentation to acetate VI
RR41_RS04060	PWY-5690	TCA cycle II (plants and fungi)
RR41_RS04060	PWY-5913	TCA cycle VI (obligate autotrophs)
RR41_RS04060	PWY-6728	methylaspartate cycle
RR41_RS04060	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RR41_RS04060	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RR41_RS04065	PWY-5392	reductive TCA cycle II
RR41_RS04065	PWY-5537	pyruvate fermentation to acetate V
RR41_RS04065	PWY-5538	pyruvate fermentation to acetate VI
RR41_RS04065	PWY-5690	TCA cycle II (plants and fungi)
RR41_RS04065	PWY-5913	TCA cycle VI (obligate autotrophs)
RR41_RS04065	PWY-6728	methylaspartate cycle
RR41_RS04065	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RR41_RS04065	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RR41_RS04155	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RR41_RS04155	PWY-5686	UMP biosynthesis
RR41_RS04155	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RR41_RS04160	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RR41_RS04160	PWY-5686	UMP biosynthesis
RR41_RS04160	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RR41_RS04190	PWY-6614	tetrahydrofolate biosynthesis
RR41_RS04225	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
RR41_RS04225	PWY-2201	folate transformations I
RR41_RS04225	PWY-3841	folate transformations II
RR41_RS04225	PWY-5030	L-histidine degradation III
RR41_RS04225	PWY-5497	purine nucleobases degradation II (anaerobic)
RR41_RS04225	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
RR41_RS04245	PWY-4261	glycerol degradation I
RR41_RS04250	PWY-4261	glycerol degradation I
RR41_RS04250	PWY-6118	glycerol-3-phosphate shuttle
RR41_RS04250	PWY-6952	glycerophosphodiester degradation
RR41_RS04255	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RR41_RS04260	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
RR41_RS04260	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
RR41_RS04260	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
RR41_RS04280	PWY-7039	phosphatidate metabolism, as a signaling molecule
RR41_RS04340	PWY-2582	brassinosteroid biosynthesis II
RR41_RS04340	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
RR41_RS04340	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
RR41_RS04340	PWY-6948	sitosterol degradation to androstenedione
RR41_RS04340	PWY-699	brassinosteroid biosynthesis I
RR41_RS04340	PWY-7299	progesterone biosynthesis
RR41_RS04400	PWY-181	photorespiration
RR41_RS04435	PWY-2941	L-lysine biosynthesis II
RR41_RS04435	PWY-2942	L-lysine biosynthesis III
RR41_RS04435	PWY-5097	L-lysine biosynthesis VI
RR41_RS04440	PWY-2941	L-lysine biosynthesis II
RR41_RS04440	PWY-5097	L-lysine biosynthesis VI
RR41_RS04590	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RR41_RS04590	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
RR41_RS04595	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RR41_RS04595	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RR41_RS04595	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RR41_RS04640	PWY-5484	glycolysis II (from fructose 6-phosphate)
RR41_RS04700	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RR41_RS04700	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RR41_RS04700	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RR41_RS04740	PWY-6482	diphthamide biosynthesis (archaea)
RR41_RS04740	PWY-7546	diphthamide biosynthesis (eukaryotes)
RR41_RS04750	PWY-6703	preQ<sub>0</sub> biosynthesis
RR41_RS04755	PWY-6703	preQ<sub>0</sub> biosynthesis
RR41_RS04800	PWY-6543	4-aminobenzoate biosynthesis
RR41_RS04810	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RR41_RS04810	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RR41_RS04810	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RR41_RS04810	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
RR41_RS04810	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RR41_RS04810	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RR41_RS04820	PWY-5316	nicotine biosynthesis
RR41_RS04820	PWY-7342	superpathway of nicotine biosynthesis
RR41_RS04900	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
RR41_RS04960	PWY-1042	glycolysis IV (plant cytosol)
RR41_RS04960	PWY-5484	glycolysis II (from fructose 6-phosphate)
RR41_RS04960	PWY-6901	superpathway of glucose and xylose degradation
RR41_RS04960	PWY-7003	glycerol degradation to butanol
RR41_RS04980	PWY-3341	L-proline biosynthesis III
RR41_RS04980	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
RR41_RS05000	PWY-723	alkylnitronates degradation
RR41_RS05015	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
RR41_RS05110	PWY-5913	TCA cycle VI (obligate autotrophs)
RR41_RS05110	PWY-6549	L-glutamine biosynthesis III
RR41_RS05110	PWY-6728	methylaspartate cycle
RR41_RS05110	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RR41_RS05110	PWY-7124	ethylene biosynthesis V (engineered)
RR41_RS05110	PWY-7254	TCA cycle VII (acetate-producers)
RR41_RS05110	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
RR41_RS05120	PWY-5913	TCA cycle VI (obligate autotrophs)
RR41_RS05120	PWY-6549	L-glutamine biosynthesis III
RR41_RS05120	PWY-6728	methylaspartate cycle
RR41_RS05120	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RR41_RS05120	PWY-7124	ethylene biosynthesis V (engineered)
RR41_RS05120	PWY-7254	TCA cycle VII (acetate-producers)
RR41_RS05120	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
RR41_RS05180	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
RR41_RS05180	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
RR41_RS05180	PWY-6897	thiamin salvage II
RR41_RS05180	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
RR41_RS05180	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
RR41_RS05180	PWY-7356	thiamin salvage IV (yeast)
RR41_RS05180	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
RR41_RS05185	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RR41_RS05240	PWY-6409	pyoverdine I biosynthesis
RR41_RS05240	PWY-6562	norspermidine biosynthesis
RR41_RS05240	PWY-761	rhizobactin 1021 biosynthesis
RR41_RS05305	PWY-6123	inosine-5'-phosphate biosynthesis I
RR41_RS05305	PWY-6124	inosine-5'-phosphate biosynthesis II
RR41_RS05305	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RR41_RS05305	PWY-7234	inosine-5'-phosphate biosynthesis III
RR41_RS05330	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
RR41_RS05330	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
RR41_RS05345	PWY-5381	pyridine nucleotide cycling (plants)
RR41_RS05345	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
RR41_RS05345	PWY-6596	adenosine nucleotides degradation I
RR41_RS05345	PWY-6606	guanosine nucleotides degradation II
RR41_RS05345	PWY-6607	guanosine nucleotides degradation I
RR41_RS05345	PWY-6608	guanosine nucleotides degradation III
RR41_RS05345	PWY-7185	UTP and CTP dephosphorylation I
RR41_RS05370	PWY-5386	methylglyoxal degradation I
RR41_RS05500	PWY-5901	2,3-dihydroxybenzoate biosynthesis
RR41_RS05505	PWY-6173	histamine biosynthesis
RR41_RS05530	PWY-6012	acyl carrier protein metabolism I
RR41_RS05530	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
RR41_RS05535	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
RR41_RS05535	PWY-5901	2,3-dihydroxybenzoate biosynthesis
RR41_RS05535	PWY-6406	salicylate biosynthesis I
RR41_RS05545	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RR41_RS05545	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RR41_RS05580	PWY-5663	tetrahydrobiopterin biosynthesis I
RR41_RS05580	PWY-5664	tetrahydrobiopterin biosynthesis II
RR41_RS05580	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
RR41_RS05580	PWY-6703	preQ<sub>0</sub> biosynthesis
RR41_RS05580	PWY-6983	tetrahydrobiopterin biosynthesis III
RR41_RS05580	PWY-7442	drosopterin and aurodrosopterin biosynthesis
RR41_RS05585	PWY-5497	purine nucleobases degradation II (anaerobic)
RR41_RS05585	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
RR41_RS05585	PWY-6538	caffeine degradation III (bacteria, via demethylation)
RR41_RS05585	PWY-6596	adenosine nucleotides degradation I
RR41_RS05585	PWY-6606	guanosine nucleotides degradation II
RR41_RS05585	PWY-6607	guanosine nucleotides degradation I
RR41_RS05585	PWY-6608	guanosine nucleotides degradation III
RR41_RS05585	PWY-6999	theophylline degradation
RR41_RS05590	PWY-5497	purine nucleobases degradation II (anaerobic)
RR41_RS05590	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
RR41_RS05590	PWY-6538	caffeine degradation III (bacteria, via demethylation)
RR41_RS05590	PWY-6596	adenosine nucleotides degradation I
RR41_RS05590	PWY-6606	guanosine nucleotides degradation II
RR41_RS05590	PWY-6607	guanosine nucleotides degradation I
RR41_RS05590	PWY-6608	guanosine nucleotides degradation III
RR41_RS05590	PWY-6999	theophylline degradation
RR41_RS05630	PWY-5958	acridone alkaloid biosynthesis
RR41_RS05630	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
RR41_RS05630	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
RR41_RS05645	PWY-381	nitrate reduction II (assimilatory)
RR41_RS05645	PWY-5675	nitrate reduction V (assimilatory)
RR41_RS05645	PWY-6549	L-glutamine biosynthesis III
RR41_RS05645	PWY-6963	ammonia assimilation cycle I
RR41_RS05645	PWY-6964	ammonia assimilation cycle II
RR41_RS05650	PWY-5755	4-hydroxybenzoate biosynthesis II (microbes)
RR41_RS05650	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
RR41_RS05650	PWY-6148	tetrahydromethanopterin biosynthesis
RR41_RS05660	PWY-6857	retinol biosynthesis
RR41_RS05690	PWY-6854	ethylene biosynthesis III (microbes)
RR41_RS05710	PWY-1281	sulfoacetaldehyde degradation I
RR41_RS05710	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
RR41_RS05710	PWY-5482	pyruvate fermentation to acetate II
RR41_RS05710	PWY-5485	pyruvate fermentation to acetate IV
RR41_RS05710	PWY-5497	purine nucleobases degradation II (anaerobic)
RR41_RS05710	PWY-6637	sulfolactate degradation II
RR41_RS05710	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RR41_RS05720	PWY-2201	folate transformations I
RR41_RS05725	PWY-2201	folate transformations I
RR41_RS05725	PWY-3841	folate transformations II
RR41_RS05730	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
RR41_RS05750	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
RR41_RS05750	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
RR41_RS05840	PWY-6700	queuosine biosynthesis
RR41_RS06050	PWY-6857	retinol biosynthesis
RR41_RS06055	PWY-1622	formaldehyde assimilation I (serine pathway)
RR41_RS06055	PWY-181	photorespiration
RR41_RS06055	PWY-2161	folate polyglutamylation
RR41_RS06055	PWY-2201	folate transformations I
RR41_RS06055	PWY-3661	glycine betaine degradation I
RR41_RS06055	PWY-3661-1	glycine betaine degradation II (mammalian)
RR41_RS06055	PWY-3841	folate transformations II
RR41_RS06055	PWY-5497	purine nucleobases degradation II (anaerobic)
RR41_RS06165	PWY-6502	oxidized GTP and dGTP detoxification
RR41_RS06165	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
RR41_RS06165	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
RR41_RS06165	PWY-6897	thiamin salvage II
RR41_RS06165	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
RR41_RS06165	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
RR41_RS06165	PWY-7356	thiamin salvage IV (yeast)
RR41_RS06165	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
RR41_RS06175	PWY-1001	cellulose biosynthesis
RR41_RS06175	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
RR41_RS06175	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
RR41_RS06175	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
RR41_RS06175	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
RR41_RS06180	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
RR41_RS06180	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
RR41_RS06180	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
RR41_RS06210	PWY-3461	L-tyrosine biosynthesis II
RR41_RS06210	PWY-3462	L-phenylalanine biosynthesis II
RR41_RS06210	PWY-6120	L-tyrosine biosynthesis III
RR41_RS06210	PWY-6627	salinosporamide A biosynthesis
RR41_RS06210	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
RR41_RS06210	PWY-7626	bacilysin biosynthesis
RR41_RS06215	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RR41_RS06215	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
RR41_RS06275	PWY-6891	thiazole biosynthesis II (Bacillus)
RR41_RS06275	PWY-6892	thiazole biosynthesis I (E. coli)
RR41_RS06320	PWY-5667	CDP-diacylglycerol biosynthesis I
RR41_RS06320	PWY-5981	CDP-diacylglycerol biosynthesis III
RR41_RS06340	PWY-5686	UMP biosynthesis
RR41_RS06350	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RR41_RS06350	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RR41_RS06350	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RR41_RS06350	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
RR41_RS06385	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
RR41_RS06385	PWY-5368	dimorphecolate biosynthesis
RR41_RS06385	PWY-5995	linoleate biosynthesis I (plants)
RR41_RS06385	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
RR41_RS06385	PWY-6803	phosphatidylcholine acyl editing
RR41_RS06385	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
RR41_RS06385	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
RR41_RS06385	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
RR41_RS06385	PWY-7470	phosphatidylcholine biosynthesis VII
RR41_RS06385	PWY-7618	ricinoleate biosynthesis
RR41_RS06440	PWY-5642	2,4-dinitrotoluene degradation
RR41_RS06440	PWY-6373	acrylate degradation
RR41_RS06550	PWY-5691	urate degradation to allantoin I
RR41_RS06550	PWY-7394	urate degradation to allantoin II
RR41_RS06630	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RR41_RS06630	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RR41_RS06670	PWY-5386	methylglyoxal degradation I
RR41_RS06690	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RR41_RS06690	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RR41_RS06690	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RR41_RS06695	PWY-6123	inosine-5'-phosphate biosynthesis I
RR41_RS06695	PWY-6124	inosine-5'-phosphate biosynthesis II
RR41_RS06695	PWY-7234	inosine-5'-phosphate biosynthesis III
RR41_RS06750	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RR41_RS06790	PWY-3781	aerobic respiration I (cytochrome c)
RR41_RS06790	PWY-4521	arsenite oxidation I (respiratory)
RR41_RS06790	PWY-6692	Fe(II) oxidation
RR41_RS06790	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RR41_RS06790	PWY-7544	pyruvate to cytochrome <i>bo</i> oxidase electron transfer
RR41_RS06805	PWY-5484	glycolysis II (from fructose 6-phosphate)
RR41_RS06915	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
RR41_RS06915	PWY-6148	tetrahydromethanopterin biosynthesis
RR41_RS06915	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
RR41_RS06915	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
RR41_RS06920	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
RR41_RS06920	PWY-6148	tetrahydromethanopterin biosynthesis
RR41_RS06920	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
RR41_RS06920	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
RR41_RS06960	PWY-381	nitrate reduction II (assimilatory)
RR41_RS06960	PWY-5675	nitrate reduction V (assimilatory)
RR41_RS06960	PWY-6549	L-glutamine biosynthesis III
RR41_RS06960	PWY-6963	ammonia assimilation cycle I
RR41_RS06960	PWY-6964	ammonia assimilation cycle II
RR41_RS06995	PWY-5747	2-methylcitrate cycle II
RR41_RS07075	PWY-2781	<i>cis</i>-zeatin biosynthesis
RR41_RS07140	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RR41_RS07195	PWY-6897	thiamin salvage II
RR41_RS07195	PWY-7356	thiamin salvage IV (yeast)
RR41_RS07195	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
RR41_RS07390	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RR41_RS07390	PWY-5723	Rubisco shunt
RR41_RS07475	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RR41_RS07475	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RR41_RS07855	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RR41_RS07855	PWY-6416	quinate degradation II
RR41_RS07855	PWY-6707	gallate biosynthesis
RR41_RS07880	PWY-6683	sulfate reduction III (assimilatory)
RR41_RS07895	PWY-5964	guanylyl molybdenum cofactor biosynthesis
RR41_RS07895	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
RR41_RS07905	PWY-6823	molybdenum cofactor biosynthesis
RR41_RS07915	PWY-6823	molybdenum cofactor biosynthesis
RR41_RS07925	PWY-6823	molybdenum cofactor biosynthesis
RR41_RS07965	PWY-3821	galactose degradation III
RR41_RS07965	PWY-6317	galactose degradation I (Leloir pathway)
RR41_RS07965	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
RR41_RS07965	PWY-6527	stachyose degradation
RR41_RS07965	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
RR41_RS07965	PWY-7344	UDP-D-galactose biosynthesis
RR41_RS07970	PWY-5392	reductive TCA cycle II
RR41_RS07970	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RR41_RS07970	PWY-5690	TCA cycle II (plants and fungi)
RR41_RS07970	PWY-5913	TCA cycle VI (obligate autotrophs)
RR41_RS07970	PWY-6728	methylaspartate cycle
RR41_RS07970	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RR41_RS07970	PWY-7254	TCA cycle VII (acetate-producers)
RR41_RS07970	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RR41_RS08000	PWY-7560	methylerythritol phosphate pathway II
RR41_RS08020	PWY-4981	L-proline biosynthesis II (from arginine)
RR41_RS08020	PWY-4984	urea cycle
RR41_RS08020	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RR41_RS08060	PWY-5667	CDP-diacylglycerol biosynthesis I
RR41_RS08060	PWY-5981	CDP-diacylglycerol biosynthesis III
RR41_RS08065	PWY-7294	xylose degradation IV
RR41_RS08065	PWY-7295	L-arabinose degradation IV
RR41_RS08065	PWY-7560	methylerythritol phosphate pathway II
RR41_RS08090	PWY-5971	palmitate biosynthesis II (bacteria and plants)
RR41_RS08090	PWY-5973	<i>cis</i>-vaccenate biosynthesis
RR41_RS08090	PWY-5989	stearate biosynthesis II (bacteria and plants)
RR41_RS08090	PWY-5994	palmitate biosynthesis I (animals and fungi)
RR41_RS08090	PWY-6113	superpathway of mycolate biosynthesis
RR41_RS08090	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
RR41_RS08090	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RR41_RS08090	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RR41_RS08090	PWY-7663	gondoate biosynthesis (anaerobic)
RR41_RS08090	PWY-7664	oleate biosynthesis IV (anaerobic)
RR41_RS08090	PWYG-321	mycolate biosynthesis
RR41_RS08560	PWY-7254	TCA cycle VII (acetate-producers)
RR41_RS08565	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
RR41_RS08565	PWY-7494	choline degradation IV
RR41_RS08570	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
RR41_RS08570	PWY-7494	choline degradation IV
RR41_RS08765	PWY-6317	galactose degradation I (Leloir pathway)
RR41_RS08790	PWY-2201	folate transformations I
RR41_RS08790	PWY-3841	folate transformations II
RR41_RS08850	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
RR41_RS08850	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RR41_RS08850	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
RR41_RS08850	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RR41_RS08930	PWY-5278	sulfite oxidation III
RR41_RS08930	PWY-5340	sulfate activation for sulfonation
RR41_RS08930	PWY-6683	sulfate reduction III (assimilatory)
RR41_RS08930	PWY-6932	selenate reduction
RR41_RS08935	PWY-5278	sulfite oxidation III
RR41_RS08935	PWY-5340	sulfate activation for sulfonation
RR41_RS08935	PWY-6683	sulfate reduction III (assimilatory)
RR41_RS08935	PWY-6932	selenate reduction
RR41_RS08965	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RR41_RS08985	PWY-5704	urea degradation II
RR41_RS08990	PWY-5704	urea degradation II
RR41_RS08995	PWY-5704	urea degradation II
RR41_RS09020	PWY-6825	phosphatidylcholine biosynthesis V
RR41_RS09040	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RR41_RS09070	PWY-6825	phosphatidylcholine biosynthesis V
RR41_RS09275	PWY-2201	folate transformations I
RR41_RS09295	PWY-5381	pyridine nucleotide cycling (plants)
RR41_RS09355	PWY-5686	UMP biosynthesis
RR41_RS09365	PWY-4983	L-citrulline-nitric oxide cycle
RR41_RS09365	PWY-4984	urea cycle
RR41_RS09365	PWY-5	canavanine biosynthesis
RR41_RS09365	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RR41_RS09365	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RR41_RS09705	PWY-2	putrescine degradation IV
RR41_RS09705	PWY-3	putrescine degradation V
RR41_RS09770	PWY-1042	glycolysis IV (plant cytosol)
RR41_RS09770	PWY-1622	formaldehyde assimilation I (serine pathway)
RR41_RS09770	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
RR41_RS09770	PWY-5484	glycolysis II (from fructose 6-phosphate)
RR41_RS09770	PWY-5723	Rubisco shunt
RR41_RS09770	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RR41_RS09770	PWY-6499	D-glucarate degradation II
RR41_RS09770	PWY-6886	1-butanol autotrophic biosynthesis
RR41_RS09770	PWY-6901	superpathway of glucose and xylose degradation
RR41_RS09770	PWY-7003	glycerol degradation to butanol
RR41_RS09770	PWY-7124	ethylene biosynthesis V (engineered)
RR41_RS09770	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
RR41_RS09775	PWY-6486	D-galacturonate degradation II
RR41_RS09775	PWY-6497	D-galactarate degradation II
RR41_RS09775	PWY-6499	D-glucarate degradation II
RR41_RS09775	PWY-6501	D-glucuronate degradation II
RR41_RS09790	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
RR41_RS09970	PWY-6610	adenine and adenosine salvage IV
RR41_RS09995	PWY-2941	L-lysine biosynthesis II
RR41_RS09995	PWY-2942	L-lysine biosynthesis III
RR41_RS09995	PWY-5097	L-lysine biosynthesis VI
RR41_RS09995	PWY-6559	spermidine biosynthesis II
RR41_RS09995	PWY-6562	norspermidine biosynthesis
RR41_RS09995	PWY-7153	grixazone biosynthesis
RR41_RS10015	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RR41_RS10075	PWY-6825	phosphatidylcholine biosynthesis V
RR41_RS10085	PWY-5686	UMP biosynthesis
RR41_RS10180	PWY-4381	fatty acid biosynthesis initiation I
RR41_RS10235	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
RR41_RS10315	PWY-3341	L-proline biosynthesis III
RR41_RS10315	PWY-4981	L-proline biosynthesis II (from arginine)
RR41_RS10315	PWY-6344	L-ornithine degradation II (Stickland reaction)
RR41_RS10390	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
RR41_RS10390	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
RR41_RS10445	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
RR41_RS10510	PWY-1361	benzoyl-CoA degradation I (aerobic)
RR41_RS10510	PWY-5109	2-methylbutanoate biosynthesis
RR41_RS10510	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
RR41_RS10510	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
RR41_RS10510	PWY-5177	glutaryl-CoA degradation
RR41_RS10510	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RR41_RS10510	PWY-6435	4-hydroxybenzoate biosynthesis V
RR41_RS10510	PWY-6583	pyruvate fermentation to butanol I
RR41_RS10510	PWY-6863	pyruvate fermentation to hexanol
RR41_RS10510	PWY-6883	pyruvate fermentation to butanol II
RR41_RS10510	PWY-6944	androstenedione degradation
RR41_RS10510	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
RR41_RS10510	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
RR41_RS10510	PWY-7007	methyl ketone biosynthesis
RR41_RS10510	PWY-7046	4-coumarate degradation (anaerobic)
RR41_RS10510	PWY-7094	fatty acid salvage
RR41_RS10510	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
RR41_RS10510	PWY-735	jasmonic acid biosynthesis
RR41_RS10510	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
RR41_RS10510	PWY-7606	docosahexaenoate biosynthesis III (mammals)
RR41_RS10510	PWY-7726	RR41_RS10510
RR41_RS10610	PWY-5169	cyanurate degradation
RR41_RS10610	PWY-5703	urea degradation I
RR41_RS10640	PWY-5169	cyanurate degradation
RR41_RS10640	PWY-5703	urea degradation I
RR41_RS10640	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RR41_RS10850	PWY-5176	coumarin biosynthesis (via 2-coumarate)
RR41_RS10885	PWY-1361	benzoyl-CoA degradation I (aerobic)
RR41_RS10885	PWY-5109	2-methylbutanoate biosynthesis
RR41_RS10885	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
RR41_RS10885	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
RR41_RS10885	PWY-5177	glutaryl-CoA degradation
RR41_RS10885	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RR41_RS10885	PWY-6435	4-hydroxybenzoate biosynthesis V
RR41_RS10885	PWY-6583	pyruvate fermentation to butanol I
RR41_RS10885	PWY-6863	pyruvate fermentation to hexanol
RR41_RS10885	PWY-6883	pyruvate fermentation to butanol II
RR41_RS10885	PWY-6944	androstenedione degradation
RR41_RS10885	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
RR41_RS10885	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
RR41_RS10885	PWY-7007	methyl ketone biosynthesis
RR41_RS10885	PWY-7046	4-coumarate degradation (anaerobic)
RR41_RS10885	PWY-7094	fatty acid salvage
RR41_RS10885	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
RR41_RS10885	PWY-735	jasmonic acid biosynthesis
RR41_RS10885	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
RR41_RS10885	PWY-7606	docosahexaenoate biosynthesis III (mammals)
RR41_RS10885	PWY-7726	RR41_RS10885
RR41_RS10890	PWY-1361	benzoyl-CoA degradation I (aerobic)
RR41_RS10890	PWY-2361	3-oxoadipate degradation
RR41_RS10890	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
RR41_RS10895	PWY-1341	phenylacetate degradation II (anaerobic)
RR41_RS10895	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
RR41_RS10895	PWY-7716	RR41_RS10895
RR41_RS10955	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RR41_RS10985	PWY-6832	2-aminoethylphosphonate degradation II
RR41_RS11020	PWY-723	alkylnitronates degradation
RR41_RS11040	PWY-1361	benzoyl-CoA degradation I (aerobic)
RR41_RS11040	PWY-5109	2-methylbutanoate biosynthesis
RR41_RS11040	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
RR41_RS11040	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
RR41_RS11040	PWY-5177	glutaryl-CoA degradation
RR41_RS11040	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RR41_RS11040	PWY-6435	4-hydroxybenzoate biosynthesis V
RR41_RS11040	PWY-6583	pyruvate fermentation to butanol I
RR41_RS11040	PWY-6863	pyruvate fermentation to hexanol
RR41_RS11040	PWY-6883	pyruvate fermentation to butanol II
RR41_RS11040	PWY-6944	androstenedione degradation
RR41_RS11040	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
RR41_RS11040	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
RR41_RS11040	PWY-7007	methyl ketone biosynthesis
RR41_RS11040	PWY-7046	4-coumarate degradation (anaerobic)
RR41_RS11040	PWY-7094	fatty acid salvage
RR41_RS11040	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
RR41_RS11040	PWY-735	jasmonic acid biosynthesis
RR41_RS11040	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
RR41_RS11040	PWY-7606	docosahexaenoate biosynthesis III (mammals)
RR41_RS11040	PWY-7726	RR41_RS11040
RR41_RS11125	PWY-4381	fatty acid biosynthesis initiation I
RR41_RS11125	PWY-5743	3-hydroxypropanoate cycle
RR41_RS11125	PWY-5744	glyoxylate assimilation
RR41_RS11125	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RR41_RS11125	PWY-6679	jadomycin biosynthesis
RR41_RS11125	PWY-6722	candicidin biosynthesis
RR41_RS11125	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RR41_RS11305	PWY-6823	molybdenum cofactor biosynthesis
RR41_RS11305	PWY-6891	thiazole biosynthesis II (Bacillus)
RR41_RS11305	PWY-6892	thiazole biosynthesis I (E. coli)
RR41_RS11305	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
RR41_RS11315	PWY-6936	seleno-amino acid biosynthesis
RR41_RS11315	PWY-7274	D-cycloserine biosynthesis
RR41_RS11380	PWY-5796	malonate decarboxylase activation
RR41_RS11390	PWY-4381	fatty acid biosynthesis initiation I
RR41_RS11390	PWY-5743	3-hydroxypropanoate cycle
RR41_RS11390	PWY-5744	glyoxylate assimilation
RR41_RS11390	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RR41_RS11390	PWY-6060	malonate degradation II (biotin-dependent)
RR41_RS11390	PWY-6679	jadomycin biosynthesis
RR41_RS11390	PWY-6722	candicidin biosynthesis
RR41_RS11390	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RR41_RS11395	PWY-4381	fatty acid biosynthesis initiation I
RR41_RS11395	PWY-5743	3-hydroxypropanoate cycle
RR41_RS11395	PWY-5744	glyoxylate assimilation
RR41_RS11395	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RR41_RS11395	PWY-6060	malonate degradation II (biotin-dependent)
RR41_RS11395	PWY-6679	jadomycin biosynthesis
RR41_RS11395	PWY-6722	candicidin biosynthesis
RR41_RS11395	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RR41_RS11400	PWY-5796	malonate decarboxylase activation
RR41_RS11405	PWY-4381	fatty acid biosynthesis initiation I
RR41_RS11405	PWY-6799	fatty acid biosynthesis (plant mitochondria)
RR41_RS11405	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RR41_RS11465	PWY-4202	arsenate detoxification I (glutaredoxin)
RR41_RS11465	PWY-4621	arsenate detoxification II (glutaredoxin)
RR41_RS11510	PWY-6936	seleno-amino acid biosynthesis
RR41_RS11510	PWY-7274	D-cycloserine biosynthesis
RR41_RS11515	PWY-6004	glycine betaine biosynthesis V (from glycine)
RR41_RS11800	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
RR41_RS11805	PWY-6700	queuosine biosynthesis
RR41_RS11810	PWY-6938	NADH repair
RR41_RS11865	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
RR41_RS11865	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
RR41_RS11870	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RR41_RS11870	PWY-5723	Rubisco shunt
RR41_RS11870	PWY-6891	thiazole biosynthesis II (Bacillus)
RR41_RS11870	PWY-6892	thiazole biosynthesis I (E. coli)
RR41_RS11870	PWY-6901	superpathway of glucose and xylose degradation
RR41_RS11870	PWY-7560	methylerythritol phosphate pathway II
RR41_RS11910	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
RR41_RS11910	PWY-6853	ethylene biosynthesis II (microbes)
RR41_RS11910	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
RR41_RS11990	PWY-1042	glycolysis IV (plant cytosol)
RR41_RS11990	PWY-5484	glycolysis II (from fructose 6-phosphate)
RR41_RS11990	PWY-6886	1-butanol autotrophic biosynthesis
RR41_RS11990	PWY-6901	superpathway of glucose and xylose degradation
RR41_RS11990	PWY-7003	glycerol degradation to butanol
RR41_RS12000	PWY-1042	glycolysis IV (plant cytosol)
RR41_RS12000	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RR41_RS12000	PWY-5484	glycolysis II (from fructose 6-phosphate)
RR41_RS12000	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RR41_RS12000	PWY-7385	1,3-propanediol biosynthesis (engineered)
RR41_RS12060	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
RR41_RS12130	PWY-7205	CMP phosphorylation
RR41_RS12150	PWY-5686	UMP biosynthesis
RR41_RS12185	PWY-6728	methylaspartate cycle
RR41_RS12185	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RR41_RS12185	PWY-7118	chitin degradation to ethanol
RR41_RS12185	PWY-7294	xylose degradation IV
RR41_RS12185	PWY-7295	L-arabinose degradation IV
RR41_RS12345	PWY-6823	molybdenum cofactor biosynthesis
RR41_RS12345	PWY-6891	thiazole biosynthesis II (Bacillus)
RR41_RS12345	PWY-6892	thiazole biosynthesis I (E. coli)
RR41_RS12345	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
RR41_RS12480	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RR41_RS12480	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
RR41_RS12480	PWY-6269	adenosylcobalamin salvage from cobinamide II
RR41_RS12485	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RR41_RS12485	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
RR41_RS12485	PWY-6269	adenosylcobalamin salvage from cobinamide II
RR41_RS12500	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RR41_RS12500	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
RR41_RS12500	PWY-6269	adenosylcobalamin salvage from cobinamide II
RR41_RS12505	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
RR41_RS12505	PWY-6164	3-dehydroquinate biosynthesis I
RR41_RS12505	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
RR41_RS12535	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
RR41_RS12535	PWY-622	starch biosynthesis
RR41_RS12600	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
RR41_RS12715	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RR41_RS12735	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
RR41_RS12735	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
RR41_RS12755	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
RR41_RS12755	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
RR41_RS12760	PWY-6389	(<i>S</i>)-acetoin biosynthesis
RR41_RS12875	PWY-5392	reductive TCA cycle II
RR41_RS12875	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RR41_RS12875	PWY-5690	TCA cycle II (plants and fungi)
RR41_RS12875	PWY-5913	TCA cycle VI (obligate autotrophs)
RR41_RS12875	PWY-6728	methylaspartate cycle
RR41_RS12875	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RR41_RS12875	PWY-7254	TCA cycle VII (acetate-producers)
RR41_RS12875	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RR41_RS12990	PWY-2421	indole-3-acetate degradation VIII (bacterial)
RR41_RS12990	PWY-5648	2-nitrobenzoate degradation II
RR41_RS12990	PWY-6079	anthranilate degradation I (aerobic)
RR41_RS12995	PWY-2421	indole-3-acetate degradation VIII (bacterial)
RR41_RS12995	PWY-5648	2-nitrobenzoate degradation II
RR41_RS12995	PWY-6079	anthranilate degradation I (aerobic)
RR41_RS13020	PWY-5901	2,3-dihydroxybenzoate biosynthesis
RR41_RS13025	PWY-5901	2,3-dihydroxybenzoate biosynthesis
RR41_RS13050	PWY-6420	pyrroloquinoline quinone biosynthesis
RR41_RS13060	PWY-6823	molybdenum cofactor biosynthesis
RR41_RS13065	PWY-7533	gliotoxin biosynthesis
RR41_RS13135	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
RR41_RS13135	PWY-3162	L-tryptophan degradation V (side chain pathway)
RR41_RS13135	PWY-5057	L-valine degradation II
RR41_RS13135	PWY-5076	L-leucine degradation III
RR41_RS13135	PWY-5078	L-isoleucine degradation II
RR41_RS13135	PWY-5079	L-phenylalanine degradation III
RR41_RS13135	PWY-5082	L-methionine degradation III
RR41_RS13135	PWY-5480	pyruvate fermentation to ethanol I
RR41_RS13135	PWY-5486	pyruvate fermentation to ethanol II
RR41_RS13135	PWY-5751	phenylethanol biosynthesis
RR41_RS13135	PWY-6313	serotonin degradation
RR41_RS13135	PWY-6333	acetaldehyde biosynthesis I
RR41_RS13135	PWY-6342	noradrenaline and adrenaline degradation
RR41_RS13135	PWY-6454	vancomycin resistance I
RR41_RS13135	PWY-6587	pyruvate fermentation to ethanol III
RR41_RS13135	PWY-6802	salidroside biosynthesis
RR41_RS13135	PWY-6871	3-methylbutanol biosynthesis
RR41_RS13135	PWY-6901	superpathway of glucose and xylose degradation
RR41_RS13135	PWY-7013	L-1,2-propanediol degradation
RR41_RS13135	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RR41_RS13135	PWY-7118	chitin degradation to ethanol
RR41_RS13135	PWY-7396	butanol and isobutanol biosynthesis (engineered)
RR41_RS13280	PWY-5381	pyridine nucleotide cycling (plants)
RR41_RS13280	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
RR41_RS13280	PWY-6596	adenosine nucleotides degradation I
RR41_RS13280	PWY-6606	guanosine nucleotides degradation II
RR41_RS13280	PWY-6607	guanosine nucleotides degradation I
RR41_RS13280	PWY-6608	guanosine nucleotides degradation III
RR41_RS13280	PWY-7185	UTP and CTP dephosphorylation I
RR41_RS13315	PWY-2201	folate transformations I
RR41_RS13315	PWY-3841	folate transformations II
RR41_RS13325	PWY-5381	pyridine nucleotide cycling (plants)
RR41_RS13540	PWY-5451	acetone degradation I (to methylglyoxal)
RR41_RS13540	PWY-6588	pyruvate fermentation to acetone
RR41_RS13540	PWY-6876	isopropanol biosynthesis
RR41_RS13540	PWY-7466	acetone degradation III (to propane-1,2-diol)
RR41_RS13560	PWY-5101	L-isoleucine biosynthesis II
RR41_RS13560	PWY-5103	L-isoleucine biosynthesis III
RR41_RS13560	PWY-5104	L-isoleucine biosynthesis IV
RR41_RS13560	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RR41_RS13580	PWY-1042	glycolysis IV (plant cytosol)
RR41_RS13580	PWY-1622	formaldehyde assimilation I (serine pathway)
RR41_RS13580	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
RR41_RS13580	PWY-5484	glycolysis II (from fructose 6-phosphate)
RR41_RS13580	PWY-5723	Rubisco shunt
RR41_RS13580	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RR41_RS13580	PWY-6886	1-butanol autotrophic biosynthesis
RR41_RS13580	PWY-6901	superpathway of glucose and xylose degradation
RR41_RS13580	PWY-7003	glycerol degradation to butanol
RR41_RS13580	PWY-7124	ethylene biosynthesis V (engineered)
RR41_RS13580	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
RR41_RS13585	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
RR41_RS13605	PWY-1361	benzoyl-CoA degradation I (aerobic)
RR41_RS13605	PWY-2361	3-oxoadipate degradation
RR41_RS13605	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
RR41_RS13610	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
RR41_RS13630	PWY-5751	phenylethanol biosynthesis
RR41_RS13680	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RR41_RS13765	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RR41_RS13765	PWY-6416	quinate degradation II
RR41_RS13765	PWY-6707	gallate biosynthesis
RR41_RS13790	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
RR41_RS13795	PWY-6123	inosine-5'-phosphate biosynthesis I
RR41_RS13795	PWY-6124	inosine-5'-phosphate biosynthesis II
RR41_RS13795	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RR41_RS13795	PWY-7234	inosine-5'-phosphate biosynthesis III
RR41_RS13800	PWY-1361	benzoyl-CoA degradation I (aerobic)
RR41_RS13800	PWY-2361	3-oxoadipate degradation
RR41_RS13800	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
RR41_RS13815	PWY-7560	methylerythritol phosphate pathway II
RR41_RS13830	PWY-1042	glycolysis IV (plant cytosol)
RR41_RS13830	PWY-1622	formaldehyde assimilation I (serine pathway)
RR41_RS13830	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
RR41_RS13830	PWY-5484	glycolysis II (from fructose 6-phosphate)
RR41_RS13830	PWY-5723	Rubisco shunt
RR41_RS13830	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RR41_RS13830	PWY-6886	1-butanol autotrophic biosynthesis
RR41_RS13830	PWY-6901	superpathway of glucose and xylose degradation
RR41_RS13830	PWY-7003	glycerol degradation to butanol
RR41_RS13830	PWY-7124	ethylene biosynthesis V (engineered)
RR41_RS13830	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
RR41_RS13835	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
RR41_RS13835	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
RR41_RS13840	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
RR41_RS13840	PWY-7177	UTP and CTP dephosphorylation II
RR41_RS13840	PWY-7185	UTP and CTP dephosphorylation I
RR41_RS13885	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
RR41_RS13885	PWY-6164	3-dehydroquinate biosynthesis I
RR41_RS13885	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
RR41_RS13910	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RR41_RS13910	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RR41_RS13925	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RR41_RS13925	PWY-5723	Rubisco shunt
RR41_RS13945	PWY-6803	phosphatidylcholine acyl editing
RR41_RS13945	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
RR41_RS13945	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
RR41_RS13945	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
RR41_RS13990	PWY-7545	pyruvate to cytochrome <i>bd</i> terminal oxidase electron transfer
RR41_RS14130	PWY-7165	L-ascorbate biosynthesis VI (engineered pathway)
RR41_RS14160	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
RR41_RS14160	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
RR41_RS14610	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RR41_RS14610	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RR41_RS14735	PWY-4041	&gamma;-glutamyl cycle
RR41_RS14735	PWY-5826	hypoglycin biosynthesis
RR41_RS14755	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RR41_RS14755	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RR41_RS14795	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RR41_RS14845	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RR41_RS14845	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RR41_RS14850	PWY-6749	CMP-legionaminate biosynthesis I
RR41_RS14855	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RR41_RS14855	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RR41_RS14855	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RR41_RS14855	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
RR41_RS14985	PWY-5381	pyridine nucleotide cycling (plants)
RR41_RS14985	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
RR41_RS15085	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RR41_RS15100	PWY-7560	methylerythritol phosphate pathway II
RR41_RS15130	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
RR41_RS15135	PWY-5155	&beta;-alanine biosynthesis III
RR41_RS15150	PWY-6167	flavin biosynthesis II (archaea)
RR41_RS15150	PWY-6168	flavin biosynthesis III (fungi)
RR41_RS15175	PWY-5367	petroselinate biosynthesis
RR41_RS15175	PWY-5515	L-arabinose degradation II
RR41_RS15175	PWY-5525	D-glucuronate degradation I
RR41_RS15175	PWY-5971	palmitate biosynthesis II (bacteria and plants)
RR41_RS15175	PWY-5973	<i>cis</i>-vaccenate biosynthesis
RR41_RS15175	PWY-5989	stearate biosynthesis II (bacteria and plants)
RR41_RS15175	PWY-5994	palmitate biosynthesis I (animals and fungi)
RR41_RS15175	PWY-6113	superpathway of mycolate biosynthesis
RR41_RS15175	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
RR41_RS15175	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RR41_RS15175	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RR41_RS15175	PWY-7663	gondoate biosynthesis (anaerobic)
RR41_RS15175	PWY-7664	oleate biosynthesis IV (anaerobic)
RR41_RS15175	PWYG-321	mycolate biosynthesis
RR41_RS15180	PWY-4381	fatty acid biosynthesis initiation I
RR41_RS15180	PWY-6799	fatty acid biosynthesis (plant mitochondria)
RR41_RS15180	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RR41_RS15220	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
RR41_RS15225	PWY-2201	folate transformations I
RR41_RS15225	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RR41_RS15295	PWY-3961	phosphopantothenate biosynthesis II
RR41_RS15340	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RR41_RS15445	PWY-7183	pyrimidine nucleobases salvage I
RR41_RS15540	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RR41_RS15540	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RR41_RS15540	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RR41_RS15540	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RR41_RS15540	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RR41_RS15540	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RR41_RS15540	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
RR41_RS15540	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
RR41_RS15550	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RR41_RS15550	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RR41_RS15550	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RR41_RS15550	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RR41_RS15550	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RR41_RS15550	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RR41_RS15550	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
RR41_RS15550	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
RR41_RS15570	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
RR41_RS15570	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
RR41_RS15570	PWY-6936	seleno-amino acid biosynthesis
RR41_RS15570	PWY-702	L-methionine biosynthesis II
RR41_RS15675	PWY-6609	adenine and adenosine salvage III
RR41_RS15675	PWY-6611	adenine and adenosine salvage V
RR41_RS15675	PWY-7179	purine deoxyribonucleosides degradation I
RR41_RS15675	PWY-7179-1	purine deoxyribonucleosides degradation
RR41_RS15700	PWY-5316	nicotine biosynthesis
RR41_RS15700	PWY-7342	superpathway of nicotine biosynthesis
RR41_RS15705	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RR41_RS15745	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RR41_RS15745	PWY-5723	Rubisco shunt
RR41_RS15755	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
RR41_RS15770	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
RR41_RS15770	PWY-5368	dimorphecolate biosynthesis
RR41_RS15770	PWY-5995	linoleate biosynthesis I (plants)
RR41_RS15770	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
RR41_RS15770	PWY-6803	phosphatidylcholine acyl editing
RR41_RS15770	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
RR41_RS15770	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
RR41_RS15770	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
RR41_RS15770	PWY-7470	phosphatidylcholine biosynthesis VII
RR41_RS15770	PWY-7618	ricinoleate biosynthesis
RR41_RS15795	PWY-5958	acridone alkaloid biosynthesis
RR41_RS15795	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
RR41_RS15795	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
RR41_RS15815	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RR41_RS15815	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RR41_RS15925	PWY-3341	L-proline biosynthesis III
RR41_RS15925	PWY-4981	L-proline biosynthesis II (from arginine)
RR41_RS15925	PWY-6344	L-ornithine degradation II (Stickland reaction)
RR41_RS15935	PWY-4381	fatty acid biosynthesis initiation I
RR41_RS15935	PWY-5743	3-hydroxypropanoate cycle
RR41_RS15935	PWY-5744	glyoxylate assimilation
RR41_RS15935	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RR41_RS15935	PWY-6679	jadomycin biosynthesis
RR41_RS15935	PWY-6722	candicidin biosynthesis
RR41_RS15935	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RR41_RS15950	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RR41_RS16050	PWY-6654	phosphopantothenate biosynthesis III
RR41_RS16055	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
RR41_RS16055	PWY-6148	tetrahydromethanopterin biosynthesis
RR41_RS16055	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
RR41_RS16055	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
RR41_RS16095	PWY-6936	seleno-amino acid biosynthesis
RR41_RS16260	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
RR41_RS16265	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
RR41_RS16265	PWY-3162	L-tryptophan degradation V (side chain pathway)
RR41_RS16265	PWY-5057	L-valine degradation II
RR41_RS16265	PWY-5076	L-leucine degradation III
RR41_RS16265	PWY-5078	L-isoleucine degradation II
RR41_RS16265	PWY-5079	L-phenylalanine degradation III
RR41_RS16265	PWY-5082	L-methionine degradation III
RR41_RS16265	PWY-5480	pyruvate fermentation to ethanol I
RR41_RS16265	PWY-5486	pyruvate fermentation to ethanol II
RR41_RS16265	PWY-5751	phenylethanol biosynthesis
RR41_RS16265	PWY-6313	serotonin degradation
RR41_RS16265	PWY-6333	acetaldehyde biosynthesis I
RR41_RS16265	PWY-6342	noradrenaline and adrenaline degradation
RR41_RS16265	PWY-6454	vancomycin resistance I
RR41_RS16265	PWY-6587	pyruvate fermentation to ethanol III
RR41_RS16265	PWY-6802	salidroside biosynthesis
RR41_RS16265	PWY-6871	3-methylbutanol biosynthesis
RR41_RS16265	PWY-6901	superpathway of glucose and xylose degradation
RR41_RS16265	PWY-7013	L-1,2-propanediol degradation
RR41_RS16265	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RR41_RS16265	PWY-7118	chitin degradation to ethanol
RR41_RS16265	PWY-7396	butanol and isobutanol biosynthesis (engineered)
RR41_RS16325	PWY-5103	L-isoleucine biosynthesis III
RR41_RS16325	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RR41_RS16330	PWY-5101	L-isoleucine biosynthesis II
RR41_RS16330	PWY-5103	L-isoleucine biosynthesis III
RR41_RS16330	PWY-5104	L-isoleucine biosynthesis IV
RR41_RS16330	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
RR41_RS16330	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
RR41_RS16330	PWY-6389	(<i>S</i>)-acetoin biosynthesis
RR41_RS16330	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RR41_RS16335	PWY-5101	L-isoleucine biosynthesis II
RR41_RS16335	PWY-5103	L-isoleucine biosynthesis III
RR41_RS16335	PWY-5104	L-isoleucine biosynthesis IV
RR41_RS16335	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
RR41_RS16335	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
RR41_RS16335	PWY-6389	(<i>S</i>)-acetoin biosynthesis
RR41_RS16335	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RR41_RS16385	PWY-5971	palmitate biosynthesis II (bacteria and plants)
RR41_RS16385	PWY-5973	<i>cis</i>-vaccenate biosynthesis
RR41_RS16385	PWY-5989	stearate biosynthesis II (bacteria and plants)
RR41_RS16385	PWY-6113	superpathway of mycolate biosynthesis
RR41_RS16385	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
RR41_RS16385	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RR41_RS16385	PWY-7663	gondoate biosynthesis (anaerobic)
RR41_RS16385	PWY-7664	oleate biosynthesis IV (anaerobic)
RR41_RS16385	PWYG-321	mycolate biosynthesis
RR41_RS16420	PWY-6012	acyl carrier protein metabolism I
RR41_RS16420	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
RR41_RS16460	PWY-2201	folate transformations I
RR41_RS16465	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RR41_RS16465	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
RR41_RS16465	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RR41_RS16465	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RR41_RS16465	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
RR41_RS16465	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RR41_RS16465	PWY-7205	CMP phosphorylation
RR41_RS16465	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RR41_RS16465	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RR41_RS16465	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
RR41_RS16465	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RR41_RS16465	PWY-7224	purine deoxyribonucleosides salvage
RR41_RS16465	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
RR41_RS16465	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
RR41_RS16490	PWY-6902	chitin degradation II
RR41_RS16505	PWY-3341	L-proline biosynthesis III
RR41_RS16505	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
RR41_RS16515	PWY-5530	sorbitol biosynthesis II
RR41_RS16515	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RR41_RS16525	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
RR41_RS16525	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
RR41_RS16525	PWY-7242	D-fructuronate degradation
RR41_RS16525	PWY-7310	D-glucosaminate degradation
RR41_RS16525	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
RR41_RS16530	PWY-5101	L-isoleucine biosynthesis II
RR41_RS16530	PWY-5103	L-isoleucine biosynthesis III
RR41_RS16530	PWY-5104	L-isoleucine biosynthesis IV
RR41_RS16530	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RR41_RS16535	PWY-5482	pyruvate fermentation to acetate II
RR41_RS16535	PWY-5485	pyruvate fermentation to acetate IV
RR41_RS16535	PWY-5497	purine nucleobases degradation II (anaerobic)
RR41_RS16540	PWY-1281	sulfoacetaldehyde degradation I
RR41_RS16540	PWY-5482	pyruvate fermentation to acetate II
RR41_RS16540	PWY-5485	pyruvate fermentation to acetate IV
RR41_RS16540	PWY-5497	purine nucleobases degradation II (anaerobic)
RR41_RS16540	PWY-6637	sulfolactate degradation II
RR41_RS16545	PWY-5392	reductive TCA cycle II
RR41_RS16545	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RR41_RS16545	PWY-5690	TCA cycle II (plants and fungi)
RR41_RS16545	PWY-5913	TCA cycle VI (obligate autotrophs)
RR41_RS16545	PWY-6728	methylaspartate cycle
RR41_RS16545	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RR41_RS16545	PWY-7254	TCA cycle VII (acetate-producers)
RR41_RS16545	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RR41_RS16605	PWY-6871	3-methylbutanol biosynthesis
RR41_RS16610	PWY-5344	L-homocysteine biosynthesis
RR41_RS16630	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
RR41_RS16685	PWY-3841	folate transformations II
RR41_RS16685	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RR41_RS16685	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RR41_RS16685	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RR41_RS16685	PWY-7199	pyrimidine deoxyribonucleosides salvage
RR41_RS16685	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RR41_RS16690	PWY-3841	folate transformations II
RR41_RS16690	PWY-6614	tetrahydrofolate biosynthesis
RR41_RS16720	PWY-2201	folate transformations I
RR41_RS16720	PWY-5497	purine nucleobases degradation II (anaerobic)
RR41_RS16840	PWY-2941	L-lysine biosynthesis II
RR41_RS16840	PWY-2942	L-lysine biosynthesis III
RR41_RS16840	PWY-5097	L-lysine biosynthesis VI
RR41_RS16840	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RR41_RS16840	PWY-6559	spermidine biosynthesis II
RR41_RS16840	PWY-6562	norspermidine biosynthesis
RR41_RS16840	PWY-7153	grixazone biosynthesis
RR41_RS16840	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RR41_RS16885	PWY-7396	butanol and isobutanol biosynthesis (engineered)
RR41_RS16940	PWY-5506	methanol oxidation to formaldehyde IV
RR41_RS17060	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
RR41_RS17095	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RR41_RS17095	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RR41_RS17230	PWY-5839	menaquinol-7 biosynthesis
RR41_RS17230	PWY-5844	menaquinol-9 biosynthesis
RR41_RS17230	PWY-5849	menaquinol-6 biosynthesis
RR41_RS17230	PWY-5890	menaquinol-10 biosynthesis
RR41_RS17230	PWY-5891	menaquinol-11 biosynthesis
RR41_RS17230	PWY-5892	menaquinol-12 biosynthesis
RR41_RS17230	PWY-5895	menaquinol-13 biosynthesis
RR41_RS17335	PWY-1042	glycolysis IV (plant cytosol)
RR41_RS17335	PWY-5484	glycolysis II (from fructose 6-phosphate)
RR41_RS17335	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RR41_RS17335	PWY-7003	glycerol degradation to butanol
RR41_RS17425	PWY-5269	cardiolipin biosynthesis II
RR41_RS17425	PWY-5668	cardiolipin biosynthesis I
RR41_RS17450	PWY-1361	benzoyl-CoA degradation I (aerobic)
RR41_RS17450	PWY-5109	2-methylbutanoate biosynthesis
RR41_RS17450	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
RR41_RS17450	PWY-5137	fatty acid &beta;-oxidation III (unsaturated, odd number)
RR41_RS17450	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
RR41_RS17450	PWY-5177	glutaryl-CoA degradation
RR41_RS17450	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RR41_RS17450	PWY-6435	4-hydroxybenzoate biosynthesis V
RR41_RS17450	PWY-6583	pyruvate fermentation to butanol I
RR41_RS17450	PWY-6837	fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent)
RR41_RS17450	PWY-6863	pyruvate fermentation to hexanol
RR41_RS17450	PWY-6883	pyruvate fermentation to butanol II
RR41_RS17450	PWY-6944	androstenedione degradation
RR41_RS17450	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
RR41_RS17450	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
RR41_RS17450	PWY-7007	methyl ketone biosynthesis
RR41_RS17450	PWY-7046	4-coumarate degradation (anaerobic)
RR41_RS17450	PWY-7094	fatty acid salvage
RR41_RS17450	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
RR41_RS17450	PWY-7291	oleate &beta;-oxidation (isomerase-dependent, yeast)
RR41_RS17450	PWY-735	jasmonic acid biosynthesis
RR41_RS17450	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
RR41_RS17450	PWY-7606	docosahexaenoate biosynthesis III (mammals)
RR41_RS17450	PWY-7726	RR41_RS17450
RR41_RS17455	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
RR41_RS17455	PWY-6435	4-hydroxybenzoate biosynthesis V
RR41_RS17455	PWY-6863	pyruvate fermentation to hexanol
RR41_RS17455	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
RR41_RS17455	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
RR41_RS17455	PWY-6948	sitosterol degradation to androstenedione
RR41_RS17455	PWY-7094	fatty acid salvage
RR41_RS17455	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
RR41_RS17455	PWY-7337	10-<i>cis</i>-heptadecenoyl-CoA degradation (yeast)
RR41_RS17455	PWY-7338	10-<i>trans</i>-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
RR41_RS17455	PWY-7339	10-<i>trans</i>-heptadecenoyl-CoA degradation (MFE-dependent, yeast)
RR41_RS17455	PWY-7340	9-<i>cis</i>, 11-<i>trans</i>-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
RR41_RS17455	PWY-735	jasmonic acid biosynthesis
RR41_RS17455	PWY-7606	docosahexaenoate biosynthesis III (mammals)
RR41_RS17455	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
RR41_RS17455	PWY-7726	RR41_RS17455
RR41_RS17610	PWY-5958	acridone alkaloid biosynthesis
RR41_RS17610	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
RR41_RS17610	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
RR41_RS17615	PWY-181	photorespiration
RR41_RS17660	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RR41_RS17660	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RR41_RS17665	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RR41_RS17665	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RR41_RS17680	PWY-4983	L-citrulline-nitric oxide cycle
RR41_RS17680	PWY-4984	urea cycle
RR41_RS17680	PWY-5	canavanine biosynthesis
RR41_RS17680	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RR41_RS17680	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RR41_RS17715	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
RR41_RS17745	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RR41_RS17745	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RR41_RS17810	PWY-1042	glycolysis IV (plant cytosol)
RR41_RS17810	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
RR41_RS17810	PWY-5484	glycolysis II (from fructose 6-phosphate)
RR41_RS17810	PWY-5723	Rubisco shunt
RR41_RS17810	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RR41_RS17810	PWY-6886	1-butanol autotrophic biosynthesis
RR41_RS17810	PWY-6901	superpathway of glucose and xylose degradation
RR41_RS17810	PWY-7003	glycerol degradation to butanol
RR41_RS17810	PWY-7124	ethylene biosynthesis V (engineered)
RR41_RS17810	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
RR41_RS17845	PWY-6167	flavin biosynthesis II (archaea)
RR41_RS17845	PWY-6168	flavin biosynthesis III (fungi)
RR41_RS17845	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RR41_RS17855	PWY-5525	D-glucuronate degradation I
RR41_RS18015	PWY-6936	seleno-amino acid biosynthesis
RR41_RS18135	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RR41_RS18145	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RR41_RS18260	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
RR41_RS18345	PWY-5642	2,4-dinitrotoluene degradation
RR41_RS18345	PWY-6373	acrylate degradation
RR41_RS18370	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RR41_RS18485	PWY-5747	2-methylcitrate cycle II
RR41_RS18495	PWY-5913	TCA cycle VI (obligate autotrophs)
RR41_RS18495	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
RR41_RS18495	PWY-6638	sulfolactate degradation III
RR41_RS18495	PWY-6642	(<i>R</i>)-cysteate degradation
RR41_RS18495	PWY-6643	coenzyme M biosynthesis II
RR41_RS18495	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
RR41_RS18495	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RR41_RS18495	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RR41_RS18500	PWY-6454	vancomycin resistance I
RR41_RS18500	PWY-6901	superpathway of glucose and xylose degradation
RR41_RS18520	PWY-6749	CMP-legionaminate biosynthesis I
RR41_RS18525	PWY-3821	galactose degradation III
RR41_RS18525	PWY-6317	galactose degradation I (Leloir pathway)
RR41_RS18525	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
RR41_RS18525	PWY-6527	stachyose degradation
RR41_RS18525	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
RR41_RS18525	PWY-7344	UDP-D-galactose biosynthesis
RR41_RS18530	PWY-3801	sucrose degradation II (sucrose synthase)
RR41_RS18530	PWY-5054	sorbitol biosynthesis I
RR41_RS18530	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
RR41_RS18530	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
RR41_RS18530	PWY-5659	GDP-mannose biosynthesis
RR41_RS18530	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RR41_RS18530	PWY-621	sucrose degradation III (sucrose invertase)
RR41_RS18530	PWY-622	starch biosynthesis
RR41_RS18530	PWY-6981	chitin biosynthesis
RR41_RS18530	PWY-6992	1,5-anhydrofructose degradation
RR41_RS18530	PWY-7238	sucrose biosynthesis II
RR41_RS18530	PWY-7347	sucrose biosynthesis III
RR41_RS18530	PWY-7385	1,3-propanediol biosynthesis (engineered)
RR41_RS18535	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
RR41_RS18540	PWY-3801	sucrose degradation II (sucrose synthase)
RR41_RS18540	PWY-6527	stachyose degradation
RR41_RS18540	PWY-7238	sucrose biosynthesis II
RR41_RS18540	PWY-7343	UDP-glucose biosynthesis
RR41_RS18550	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
RR41_RS18550	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
RR41_RS18550	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
RR41_RS18565	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
RR41_RS18575	PWY-3821	galactose degradation III
RR41_RS18575	PWY-6317	galactose degradation I (Leloir pathway)
RR41_RS18575	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
RR41_RS18575	PWY-6527	stachyose degradation
RR41_RS18575	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
RR41_RS18575	PWY-7344	UDP-D-galactose biosynthesis
RR41_RS18600	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
RR41_RS18680	PWY-5316	nicotine biosynthesis
RR41_RS18680	PWY-5381	pyridine nucleotide cycling (plants)
RR41_RS18680	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
RR41_RS18680	PWY-7342	superpathway of nicotine biosynthesis
RR41_RS18725	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
RR41_RS18725	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
RR41_RS18725	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
RR41_RS18725	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
RR41_RS18725	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
RR41_RS18725	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
RR41_RS18725	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
RR41_RS18725	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
RR41_RS18725	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
RR41_RS18725	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
RR41_RS18750	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RR41_RS18795	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
RR41_RS18795	PWY-6167	flavin biosynthesis II (archaea)
RR41_RS18795	PWY-6168	flavin biosynthesis III (fungi)
RR41_RS18915	PWY-6123	inosine-5'-phosphate biosynthesis I
RR41_RS18915	PWY-7234	inosine-5'-phosphate biosynthesis III
RR41_RS18975	PWY-5497	purine nucleobases degradation II (anaerobic)
RR41_RS18975	PWY-6606	guanosine nucleotides degradation II
RR41_RS18975	PWY-6608	guanosine nucleotides degradation III
RR41_RS18975	PWY-7442	drosopterin and aurodrosopterin biosynthesis
RR41_RS18985	PWY-6599	guanine and guanosine salvage II
RR41_RS18985	PWY-6609	adenine and adenosine salvage III
RR41_RS18985	PWY-6610	adenine and adenosine salvage IV
RR41_RS18985	PWY-6620	guanine and guanosine salvage
