RR41_RS00005 SM00382 ATPases associated with a variety of cellular activities RR41_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain RR41_RS00010 SM00480 DNA polymerase III beta subunit RR41_RS00020 SM00387 Histidine kinase-like ATPases RR41_RS00020 SM00433 TopoisomeraseII RR41_RS00035 SM00382 ATPases associated with a variety of cellular activities RR41_RS00180 SM00271 DnaJ molecular chaperone homology domain RR41_RS00220 SM00345 helix_turn_helix gluconate operon transcriptional repressor RR41_RS00225 SM00829 Enoylreductase RR41_RS00245 SM00478 endonuclease III RR41_RS00245 SM00525 RR41_RS00245 RR41_RS00275 SM00382 ATPases associated with a variety of cellular activities RR41_RS00300 SM01130 RR41_RS00300 RR41_RS00330 SM00346 helix_turn_helix isocitrate lyase regulation RR41_RS00360 SM00833 Cobalamin synthesis protein cobW C-terminal domain RR41_RS00370 SM00345 helix_turn_helix gluconate operon transcriptional repressor RR41_RS00370 SM00866 RR41_RS00370 RR41_RS00485 SM00450 Rhodanese Homology Domain RR41_RS00500 SM00387 Histidine kinase-like ATPases RR41_RS00500 SM00388 His Kinase A (phosphoacceptor) domain RR41_RS00505 SM00448 cheY-homologous receiver domain RR41_RS00505 SM00862 Transcriptional regulatory protein, C terminal RR41_RS00705 SM00387 Histidine kinase-like ATPases RR41_RS00705 SM00433 TopoisomeraseII RR41_RS00775 SM00267 diguanylate cyclase RR41_RS00845 SM00842 Cell division protein FtsA RR41_RS00850 SM00864 Tubulin/FtsZ family, GTPase domain RR41_RS00850 SM00865 Tubulin/FtsZ family, C-terminal domain RR41_RS00895 SM00849 Metallo-beta-lactamase superfamily RR41_RS00905 SM00116 Domain in cystathionine beta-synthase and other proteins. RR41_RS00905 SM01240 RR41_RS00905 RR41_RS00930 SM00937 RR41_RS00930 RR41_RS00935 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RR41_RS00975 SM00344 helix_turn_helix ASNC type RR41_RS00990 SM00421 helix_turn_helix, Lux Regulon RR41_RS00990 SM00448 cheY-homologous receiver domain RR41_RS01000 SM00387 Histidine kinase-like ATPases RR41_RS01000 SM00388 His Kinase A (phosphoacceptor) domain RR41_RS01000 SM00448 cheY-homologous receiver domain RR41_RS01035 SM00267 diguanylate cyclase RR41_RS01050 SM00829 Enoylreductase RR41_RS01095 SM00530 Helix-turn-helix XRE-family like proteins RR41_RS01105 SM00345 helix_turn_helix gluconate operon transcriptional repressor RR41_RS01235 SM00382 ATPases associated with a variety of cellular activities RR41_RS01245 SM00342 helix_turn_helix, arabinose operon control protein RR41_RS01265 SM00477 DNA/RNA non-specific endonuclease RR41_RS01265 SM00892 DNA/RNA non-specific endonuclease RR41_RS01285 SM00342 helix_turn_helix, arabinose operon control protein RR41_RS01305 SM00357 Cold shock protein domain RR41_RS01325 SM00530 Helix-turn-helix XRE-family like proteins RR41_RS01330 SM00382 ATPases associated with a variety of cellular activities RR41_RS01340 SM00474 3'-5' exonuclease RR41_RS01385 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RR41_RS01385 SM00387 Histidine kinase-like ATPases RR41_RS01385 SM00388 His Kinase A (phosphoacceptor) domain RR41_RS01390 SM00448 cheY-homologous receiver domain RR41_RS01390 SM00862 Transcriptional regulatory protein, C terminal RR41_RS01395 SM00316 Ribosomal protein S1-like RNA-binding domain RR41_RS01395 SM00732 Likely ribonuclease with RNase H fold. RR41_RS01400 SM00947 Carbonic anhydrase RR41_RS01415 SM00382 ATPases associated with a variety of cellular activities RR41_RS01420 SM00671 Sel1-like repeats. RR41_RS01555 SM00842 Cell division protein FtsA RR41_RS01575 SM00965 Secretin and TonB N terminus short domain RR41_RS01655 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RR41_RS01655 SM00954 Region found in RelA / SpoT proteins RR41_RS01660 SM01409 RR41_RS01660 RR41_RS01665 SM00072 Guanylate kinase homologues. RR41_RS01855 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RR41_RS01970 SM00116 Domain in cystathionine beta-synthase and other proteins. RR41_RS02010 SM00861 Transketolase, pyrimidine binding domain RR41_RS02020 SM00487 DEAD-like helicases superfamily RR41_RS02020 SM00490 helicase superfamily c-terminal domain RR41_RS02030 SM00382 ATPases associated with a variety of cellular activities RR41_RS02075 SM00487 DEAD-like helicases superfamily RR41_RS02075 SM00490 helicase superfamily c-terminal domain RR41_RS02105 SM00563 Phosphate acyltransferases RR41_RS02155 SM01403 RR41_RS02155 RR41_RS02175 SM01382 RR41_RS02175 RR41_RS02175 SM01383 RR41_RS02175 RR41_RS02190 SM00322 K homology RNA-binding domain RR41_RS02210 SM01374 RR41_RS02210 RR41_RS02215 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. RR41_RS02280 SM00363 S4 RNA-binding domain RR41_RS02280 SM01390 RR41_RS02280 RR41_RS02285 SM00662 RNA polymerases D RR41_RS02345 SM00316 Ribosomal protein S1-like RNA-binding domain RR41_RS02345 SM00955 RR41_RS02345 RR41_RS02400 SM00342 helix_turn_helix, arabinose operon control protein RR41_RS02450 SM00729 Elongator protein 3, MiaB family, Radical SAM RR41_RS02485 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. RR41_RS02550 SM00878 Biotin carboxylase C-terminal domain RR41_RS02585 SM00650 Ribosomal RNA adenine dimethylases RR41_RS02615 SM00563 Phosphate acyltransferases RR41_RS02620 SM00155 Phospholipase D. Active site motifs. RR41_RS02635 SM00267 diguanylate cyclase RR41_RS02745 SM00746 metallochaperone-like domain RR41_RS02750 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RR41_RS02750 SM00387 Histidine kinase-like ATPases RR41_RS02750 SM00388 His Kinase A (phosphoacceptor) domain RR41_RS02755 SM00448 cheY-homologous receiver domain RR41_RS02755 SM00862 Transcriptional regulatory protein, C terminal RR41_RS02805 SM00899 RR41_RS02805 RR41_RS02815 SM00422 helix_turn_helix, mercury resistance RR41_RS02865 SM00450 Rhodanese Homology Domain RR41_RS02890 SM00481 DNA polymerase alpha chain like domain RR41_RS02920 SM01323 RR41_RS02920 RR41_RS02955 SM00387 Histidine kinase-like ATPases RR41_RS02955 SM00388 His Kinase A (phosphoacceptor) domain RR41_RS03070 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RR41_RS03070 SM00387 Histidine kinase-like ATPases RR41_RS03070 SM00388 His Kinase A (phosphoacceptor) domain RR41_RS03075 SM00448 cheY-homologous receiver domain RR41_RS03075 SM00862 Transcriptional regulatory protein, C terminal RR41_RS03135 SM00342 helix_turn_helix, arabinose operon control protein RR41_RS03165 SM00849 Metallo-beta-lactamase superfamily RR41_RS03175 SM00957 SecA DEAD-like domain RR41_RS03175 SM00958 SecA preprotein cross-linking domain RR41_RS03225 SM00342 helix_turn_helix, arabinose operon control protein RR41_RS03240 SM00564 beta-propeller repeat RR41_RS03305 SM00838 Elongation factor G C-terminus RR41_RS03325 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain RR41_RS03325 SM01232 RR41_RS03325 RR41_RS03350 SM00671 Sel1-like repeats. RR41_RS03405 SM00448 cheY-homologous receiver domain RR41_RS03410 SM00448 cheY-homologous receiver domain RR41_RS03415 SM00260 Two component signalling adaptor domain RR41_RS03420 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RR41_RS03425 SM00073 Histidine Phosphotransfer domain RR41_RS03425 SM00260 Two component signalling adaptor domain RR41_RS03425 SM00387 Histidine kinase-like ATPases RR41_RS03425 SM00448 cheY-homologous receiver domain RR41_RS03425 SM01231 RR41_RS03425 RR41_RS03570 SM00845 GatB domain RR41_RS03605 SM00316 Ribosomal protein S1-like RNA-binding domain RR41_RS03645 SM00342 helix_turn_helix, arabinose operon control protein RR41_RS03665 SM00342 helix_turn_helix, arabinose operon control protein RR41_RS03670 SM00829 Enoylreductase RR41_RS03735 SM00244 prohibitin homologues RR41_RS03750 SM00563 Phosphate acyltransferases RR41_RS03770 SM00448 cheY-homologous receiver domain RR41_RS03770 SM00862 Transcriptional regulatory protein, C terminal RR41_RS03775 SM00387 Histidine kinase-like ATPases RR41_RS03775 SM00388 His Kinase A (phosphoacceptor) domain RR41_RS03825 SM00822 RR41_RS03825 RR41_RS03875 SM00014 Acid phosphatase homologues RR41_RS04010 SM00450 Rhodanese Homology Domain RR41_RS04045 SM00861 Transketolase, pyrimidine binding domain RR41_RS04065 SM00881 CoA binding domain RR41_RS04155 SM00851 MGS-like domain RR41_RS04155 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain RR41_RS04160 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain RR41_RS04175 SM01103 RR41_RS04175 RR41_RS04185 SM00382 ATPases associated with a variety of cellular activities RR41_RS04260 SM00046 Diacylglycerol kinase catalytic domain (presumed) RR41_RS04270 SM00883 Chaperonin 10 Kd subunit RR41_RS04285 SM00849 Metallo-beta-lactamase superfamily RR41_RS04410 SM00978 RR41_RS04410 RR41_RS04415 SM00382 ATPases associated with a variety of cellular activities RR41_RS04470 SM00893 Electron transfer flavoprotein domain RR41_RS04475 SM00893 Electron transfer flavoprotein domain RR41_RS04480 SM00434 DNA Topoisomerase IV RR41_RS04550 SM00382 ATPases associated with a variety of cellular activities RR41_RS04685 SM00382 ATPases associated with a variety of cellular activities RR41_RS04690 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RR41_RS04695 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RR41_RS04700 SM01211 RR41_RS04700 RR41_RS04775 SM00382 ATPases associated with a variety of cellular activities RR41_RS04825 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RR41_RS04835 SM00838 Elongation factor G C-terminus RR41_RS04850 SM00358 Double-stranded RNA binding motif RR41_RS04850 SM00535 Ribonuclease III family RR41_RS04935 SM00267 diguanylate cyclase RR41_RS04945 SM00487 DEAD-like helicases superfamily RR41_RS04945 SM00490 helicase superfamily c-terminal domain RR41_RS04960 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RR41_RS04980 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase RR41_RS05120 SM01329 RR41_RS05120 RR41_RS05170 SM00880 RR41_RS05170 RR41_RS05170 SM01118 RR41_RS05170 RR41_RS05200 SM00487 DEAD-like helicases superfamily RR41_RS05200 SM00490 helicase superfamily c-terminal domain RR41_RS05255 SM00344 helix_turn_helix ASNC type RR41_RS05285 SM00382 ATPases associated with a variety of cellular activities RR41_RS05330 SM00936 Penicillin-binding protein 5, C-terminal domain RR41_RS05350 SM00257 Lysin motif RR41_RS05385 SM00052 Putative diguanylate phosphodiesterase RR41_RS05400 SM00841 Elongation factor P, C-terminal RR41_RS05400 SM01185 RR41_RS05400 RR41_RS05470 SM00382 ATPases associated with a variety of cellular activities RR41_RS05515 SM00382 ATPases associated with a variety of cellular activities RR41_RS05520 SM00382 ATPases associated with a variety of cellular activities RR41_RS05585 SM01092 CO dehydrogenase flavoprotein C-terminal domain RR41_RS05590 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RR41_RS05600 SM00463 Small MutS-related domain RR41_RS05645 SM01230 RR41_RS05645 RR41_RS05700 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RR41_RS05710 SM00919 Malic enzyme, NAD binding domain RR41_RS05710 SM01274 RR41_RS05710 RR41_RS05715 SM00052 Putative diguanylate phosphodiesterase RR41_RS05715 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) RR41_RS05715 SM00091 PAS domain RR41_RS05715 SM00267 diguanylate cyclase RR41_RS05730 SM00996 S-adenosyl-L-homocysteine hydrolase RR41_RS05730 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain RR41_RS05750 SM00729 Elongator protein 3, MiaB family, Radical SAM RR41_RS05800 SM00342 helix_turn_helix, arabinose operon control protein RR41_RS05850 SM00382 ATPases associated with a variety of cellular activities RR41_RS06010 SM00507 HNH nucleases RR41_RS06045 SM00479 RR41_RS06045 RR41_RS06080 SM00062 Bacterial periplasmic substrate-binding proteins RR41_RS06095 SM00382 ATPases associated with a variety of cellular activities RR41_RS06115 SM00345 helix_turn_helix gluconate operon transcriptional repressor RR41_RS06140 SM00382 ATPases associated with a variety of cellular activities RR41_RS06150 SM00448 cheY-homologous receiver domain RR41_RS06150 SM00862 Transcriptional regulatory protein, C terminal RR41_RS06155 SM00387 Histidine kinase-like ATPases RR41_RS06155 SM00388 His Kinase A (phosphoacceptor) domain RR41_RS06210 SM00830 Chorismate mutase type II RR41_RS06255 SM00382 ATPases associated with a variety of cellular activities RR41_RS06300 SM00357 Cold shock protein domain RR41_RS06305 SM00487 DEAD-like helicases superfamily RR41_RS06305 SM00490 helicase superfamily c-terminal domain RR41_RS06325 SM00855 Phosphoglycerate mutase family RR41_RS06405 SM00220 Serine/Threonine protein kinases, catalytic domain RR41_RS06480 SM01034 Sensors of blue-light using FAD RR41_RS06495 SM00342 helix_turn_helix, arabinose operon control protein RR41_RS06515 SM00345 helix_turn_helix gluconate operon transcriptional repressor RR41_RS06515 SM00895 RR41_RS06515 RR41_RS06550 SM00095 Transthyretin RR41_RS06560 SM00448 cheY-homologous receiver domain RR41_RS06560 SM00862 Transcriptional regulatory protein, C terminal RR41_RS06565 SM00387 Histidine kinase-like ATPases RR41_RS06565 SM00388 His Kinase A (phosphoacceptor) domain RR41_RS06605 SM00388 His Kinase A (phosphoacceptor) domain RR41_RS06610 SM00448 cheY-homologous receiver domain RR41_RS06610 SM00862 Transcriptional regulatory protein, C terminal RR41_RS06670 SM00849 Metallo-beta-lactamase superfamily RR41_RS06680 SM00382 ATPases associated with a variety of cellular activities RR41_RS06680 SM00930 RR41_RS06680 RR41_RS06690 SM01209 RR41_RS06690 RR41_RS06690 SM01210 RR41_RS06690 RR41_RS06695 SM00798 AICARFT/IMPCHase bienzyme RR41_RS06695 SM00851 MGS-like domain RR41_RS06720 SM01228 RR41_RS06720 RR41_RS06740 SM00460 Transglutaminase/protease-like homologues RR41_RS06750 SM01005 Alanine racemase, C-terminal domain RR41_RS06870 SM00937 RR41_RS06870 RR41_RS06880 SM00342 helix_turn_helix, arabinose operon control protein RR41_RS06885 SM00822 RR41_RS06885 RR41_RS06900 SM00903 Flavin reductase like domain RR41_RS06915 SM00905 Dihydroneopterin aldolase RR41_RS06940 SM00387 Histidine kinase-like ATPases RR41_RS06940 SM00388 His Kinase A (phosphoacceptor) domain RR41_RS06945 SM00448 cheY-homologous receiver domain RR41_RS06945 SM00862 Transcriptional regulatory protein, C terminal RR41_RS06960 SM01230 RR41_RS06960 RR41_RS07045 SM00363 S4 RNA-binding domain RR41_RS07070 SM00853 MutL C terminal dimerisation domain RR41_RS07070 SM01340 RR41_RS07070 RR41_RS07170 SM00862 Transcriptional regulatory protein, C terminal RR41_RS07185 SM00382 ATPases associated with a variety of cellular activities RR41_RS07230 SM00972 Spore Coat Protein U domain RR41_RS07255 SM00344 helix_turn_helix ASNC type RR41_RS07340 SM00382 ATPases associated with a variety of cellular activities RR41_RS07365 SM00831 Cation transporter/ATPase, N-terminus RR41_RS07380 SM00344 helix_turn_helix ASNC type RR41_RS07410 SM00822 RR41_RS07410 RR41_RS07445 SM00382 ATPases associated with a variety of cellular activities RR41_RS07470 SM00226 Low molecular weight phosphatase family RR41_RS07515 SM01236 RR41_RS07515 RR41_RS07535 SM00382 ATPases associated with a variety of cellular activities RR41_RS07570 SM00530 Helix-turn-helix XRE-family like proteins RR41_RS07610 SM00507 HNH nucleases RR41_RS07845 SM00878 Biotin carboxylase C-terminal domain RR41_RS07870 SM00448 cheY-homologous receiver domain RR41_RS07870 SM01012 RR41_RS07870 RR41_RS07890 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RR41_RS07900 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RR41_RS07905 SM00729 Elongator protein 3, MiaB family, Radical SAM RR41_RS07920 SM00852 Probable molybdopterin binding domain RR41_RS07925 SM00852 Probable molybdopterin binding domain RR41_RS07935 SM00345 helix_turn_helix gluconate operon transcriptional repressor RR41_RS08030 SM00382 ATPases associated with a variety of cellular activities RR41_RS08030 SM00448 cheY-homologous receiver domain RR41_RS08035 SM00091 PAS domain RR41_RS08035 SM00387 Histidine kinase-like ATPases RR41_RS08035 SM00388 His Kinase A (phosphoacceptor) domain RR41_RS08040 SM00729 Elongator protein 3, MiaB family, Radical SAM RR41_RS08070 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RR41_RS08080 SM00935 Outer membrane protein (OmpH-like) RR41_RS08110 SM00382 ATPases associated with a variety of cellular activities RR41_RS08115 SM00363 S4 RNA-binding domain RR41_RS08150 SM00530 Helix-turn-helix XRE-family like proteins RR41_RS08375 SM00487 DEAD-like helicases superfamily RR41_RS08445 SM00257 Lysin motif RR41_RS08450 SM00530 Helix-turn-helix XRE-family like proteins RR41_RS08480 SM01130 RR41_RS08480 RR41_RS08500 SM00965 Secretin and TonB N terminus short domain RR41_RS08615 SM01322 RR41_RS08615 RR41_RS08655 SM00346 helix_turn_helix isocitrate lyase regulation RR41_RS08675 SM00822 RR41_RS08675 RR41_RS08745 SM00342 helix_turn_helix, arabinose operon control protein RR41_RS08790 SM01018 B12 binding domain RR41_RS08850 SM00947 Carbonic anhydrase RR41_RS08860 SM00382 ATPases associated with a variety of cellular activities RR41_RS08955 SM01091 Transporter associated domain RR41_RS09000 SM00988 UreE urease accessory protein, N-terminal domain RR41_RS09045 SM00478 endonuclease III RR41_RS09055 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RR41_RS09075 SM00382 ATPases associated with a variety of cellular activities RR41_RS09075 SM00464 Found in ATP-dependent protease La (LON) RR41_RS09230 SM01011 Aminopeptidase P, N-terminal domain RR41_RS09250 SM00422 helix_turn_helix, mercury resistance RR41_RS09305 SM00479 RR41_RS09305 RR41_RS09310 SM00257 Lysin motif RR41_RS09330 SM00382 ATPases associated with a variety of cellular activities RR41_RS09350 SM00479 RR41_RS09350 RR41_RS09360 SM00267 diguanylate cyclase RR41_RS09530 SM00487 DEAD-like helicases superfamily RR41_RS09530 SM00490 helicase superfamily c-terminal domain RR41_RS09565 SM00506 Appr-1"-p processing enzyme RR41_RS09695 SM00345 helix_turn_helix gluconate operon transcriptional repressor RR41_RS09695 SM00895 RR41_RS09695 RR41_RS09710 SM00344 helix_turn_helix ASNC type RR41_RS09750 SM00342 helix_turn_helix, arabinose operon control protein RR41_RS09770 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain RR41_RS09775 SM01130 RR41_RS09775 RR41_RS09785 SM00345 helix_turn_helix gluconate operon transcriptional repressor RR41_RS09785 SM00895 RR41_RS09785 RR41_RS09835 SM00347 helix_turn_helix multiple antibiotic resistance protein RR41_RS09840 SM00345 helix_turn_helix gluconate operon transcriptional repressor RR41_RS09840 SM00895 RR41_RS09840 RR41_RS10000 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain RR41_RS10005 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RR41_RS10015 SM00788 Adenylosuccinate synthetase RR41_RS10035 SM00100 Cyclic nucleotide-monophosphate binding domain RR41_RS10035 SM00419 helix_turn_helix, cAMP Regulatory protein RR41_RS10060 SM00382 ATPases associated with a variety of cellular activities RR41_RS10060 SM01086 C-terminal, D2-small domain, of ClpB protein RR41_RS10075 SM00981 RR41_RS10075 RR41_RS10175 SM00382 ATPases associated with a variety of cellular activities RR41_RS10175 SM00487 DEAD-like helicases superfamily RR41_RS10175 SM00490 helicase superfamily c-terminal domain RR41_RS10175 SM00847 Helicase associated domain (HA2) Add an annotation RR41_RS10230 SM00422 helix_turn_helix, mercury resistance RR41_RS10280 SM00530 Helix-turn-helix XRE-family like proteins RR41_RS10380 SM00840 RR41_RS10380 RR41_RS10385 SM00116 Domain in cystathionine beta-synthase and other proteins. RR41_RS10405 SM00382 ATPases associated with a variety of cellular activities RR41_RS10415 SM00382 ATPases associated with a variety of cellular activities RR41_RS10460 SM00533 DNA-binding domain of DNA mismatch repair MUTS family RR41_RS10460 SM00534 ATPase domain of DNA mismatch repair MUTS family RR41_RS10465 SM00344 helix_turn_helix ASNC type RR41_RS10475 SM00052 Putative diguanylate phosphodiesterase RR41_RS10500 SM00422 helix_turn_helix, mercury resistance RR41_RS10555 SM00796 Allophanate hydrolase subunit 1 RR41_RS10555 SM00797 Allophanate hydrolase subunit 2 RR41_RS10560 SM00878 Biotin carboxylase C-terminal domain RR41_RS10570 SM00671 Sel1-like repeats. RR41_RS10595 SM00829 Enoylreductase RR41_RS10610 SM00796 Allophanate hydrolase subunit 1 RR41_RS10610 SM00797 Allophanate hydrolase subunit 2 RR41_RS10610 SM00878 Biotin carboxylase C-terminal domain RR41_RS10650 SM00382 ATPases associated with a variety of cellular activities RR41_RS10700 SM00671 Sel1-like repeats. RR41_RS10735 SM00248 ankyrin repeats RR41_RS10770 SM00422 helix_turn_helix, mercury resistance RR41_RS10785 SM01130 RR41_RS10785 RR41_RS10795 SM00345 helix_turn_helix gluconate operon transcriptional repressor RR41_RS10795 SM00895 RR41_RS10795 RR41_RS10820 SM00342 helix_turn_helix, arabinose operon control protein RR41_RS10925 SM01060 RR41_RS10925 RR41_RS10945 SM00346 helix_turn_helix isocitrate lyase regulation RR41_RS10955 SM01005 Alanine racemase, C-terminal domain RR41_RS10960 SM00345 helix_turn_helix gluconate operon transcriptional repressor RR41_RS10960 SM00866 RR41_RS10960 RR41_RS10970 SM00382 ATPases associated with a variety of cellular activities RR41_RS11010 SM00346 helix_turn_helix isocitrate lyase regulation RR41_RS11030 SM00346 helix_turn_helix isocitrate lyase regulation RR41_RS11065 SM00882 Coenzyme A transferase RR41_RS11070 SM00882 Coenzyme A transferase RR41_RS11115 SM00878 Biotin carboxylase C-terminal domain RR41_RS11205 SM01236 RR41_RS11205 RR41_RS11210 SM01060 RR41_RS11210 RR41_RS11225 SM00384 DNA binding domain with preference for A/T rich regions RR41_RS11245 SM00344 helix_turn_helix ASNC type RR41_RS11255 SM00387 Histidine kinase-like ATPases RR41_RS11255 SM00388 His Kinase A (phosphoacceptor) domain RR41_RS11255 SM00448 cheY-homologous receiver domain RR41_RS11280 SM00382 ATPases associated with a variety of cellular activities RR41_RS11285 SM00062 Bacterial periplasmic substrate-binding proteins RR41_RS11290 SM00062 Bacterial periplasmic substrate-binding proteins RR41_RS11320 SM00450 Rhodanese Homology Domain RR41_RS11325 SM00822 RR41_RS11325 RR41_RS11360 SM00345 helix_turn_helix gluconate operon transcriptional repressor RR41_RS11405 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. RR41_RS11425 SM00345 helix_turn_helix gluconate operon transcriptional repressor RR41_RS11470 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RR41_RS11520 SM00481 DNA polymerase alpha chain like domain RR41_RS11525 SM00870 RR41_RS11525 RR41_RS11550 SM00342 helix_turn_helix, arabinose operon control protein RR41_RS11565 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RR41_RS11600 SM00100 Cyclic nucleotide-monophosphate binding domain RR41_RS11600 SM00419 helix_turn_helix, cAMP Regulatory protein RR41_RS11620 SM00382 ATPases associated with a variety of cellular activities RR41_RS11620 SM00930 RR41_RS11620 RR41_RS11655 SM00062 Bacterial periplasmic substrate-binding proteins RR41_RS11670 SM00382 ATPases associated with a variety of cellular activities RR41_RS11695 SM00344 helix_turn_helix ASNC type RR41_RS11705 SM00563 Phosphate acyltransferases RR41_RS11715 SM01236 RR41_RS11715 RR41_RS11800 SM00729 Elongator protein 3, MiaB family, Radical SAM RR41_RS11800 SM00876 Biotin and Thiamin Synthesis associated domain RR41_RS11820 SM00530 Helix-turn-helix XRE-family like proteins RR41_RS11870 SM00861 Transketolase, pyrimidine binding domain RR41_RS11880 SM00867 YceI-like domain RR41_RS11915 SM00344 helix_turn_helix ASNC type RR41_RS11935 SM00342 helix_turn_helix, arabinose operon control protein RR41_RS11945 SM00382 ATPases associated with a variety of cellular activities RR41_RS11965 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RR41_RS11975 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. RR41_RS12035 SM00470 ParB-like nuclease domain RR41_RS12050 SM00382 ATPases associated with a variety of cellular activities RR41_RS12110 SM00986 Uracil DNA glycosylase superfamily RR41_RS12110 SM00987 UreE urease accessory protein, C-terminal domain RR41_RS12135 SM00316 Ribosomal protein S1-like RNA-binding domain RR41_RS12140 SM00411 bacterial (prokaryotic) histone like domain RR41_RS12150 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family RR41_RS12175 SM00342 helix_turn_helix, arabinose operon control protein RR41_RS12245 SM00382 ATPases associated with a variety of cellular activities RR41_RS12305 SM00487 DEAD-like helicases superfamily RR41_RS12305 SM00490 helicase superfamily c-terminal domain RR41_RS12305 SM00982 RR41_RS12305 RR41_RS12305 SM01058 CarD-like/TRCF domain RR41_RS12315 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain RR41_RS12330 SM00271 DnaJ molecular chaperone homology domain RR41_RS12365 SM00411 bacterial (prokaryotic) histone like domain RR41_RS12375 SM00342 helix_turn_helix, arabinose operon control protein RR41_RS12465 SM01006 Siderophore biosynthesis protein domain RR41_RS12490 SM00855 Phosphoglycerate mutase family RR41_RS12550 SM00382 ATPases associated with a variety of cellular activities RR41_RS12590 SM01324 RR41_RS12590 RR41_RS12660 SM00493 RR41_RS12660 RR41_RS12665 SM00341 Helicase and RNase D C-terminal RR41_RS12665 SM00474 3'-5' exonuclease RR41_RS12695 SM00382 ATPases associated with a variety of cellular activities RR41_RS12720 SM00267 diguanylate cyclase RR41_RS12735 SM00729 Elongator protein 3, MiaB family, Radical SAM RR41_RS12745 SM00861 Transketolase, pyrimidine binding domain RR41_RS12765 SM00829 Enoylreductase RR41_RS12775 SM00382 ATPases associated with a variety of cellular activities RR41_RS12780 SM00849 Metallo-beta-lactamase superfamily RR41_RS12805 SM00342 helix_turn_helix, arabinose operon control protein RR41_RS12825 SM00345 helix_turn_helix gluconate operon transcriptional repressor RR41_RS12825 SM00866 RR41_RS12825 RR41_RS12850 SM00382 ATPases associated with a variety of cellular activities RR41_RS12855 SM00567 E-Z type HEAT repeats RR41_RS12910 SM00882 Coenzyme A transferase RR41_RS12915 SM00882 Coenzyme A transferase RR41_RS12940 SM00342 helix_turn_helix, arabinose operon control protein RR41_RS12970 SM00903 Flavin reductase like domain RR41_RS12980 SM00342 helix_turn_helix, arabinose operon control protein RR41_RS13015 SM00382 ATPases associated with a variety of cellular activities RR41_RS13060 SM00729 Elongator protein 3, MiaB family, Radical SAM RR41_RS13085 SM00155 Phospholipase D. Active site motifs. RR41_RS13105 SM00155 Phospholipase D. Active site motifs. RR41_RS13135 SM00829 Enoylreductase RR41_RS13260 SM00530 Helix-turn-helix XRE-family like proteins RR41_RS13330 SM01400 RR41_RS13330 RR41_RS13340 SM00342 helix_turn_helix, arabinose operon control protein RR41_RS13350 SM00382 ATPases associated with a variety of cellular activities RR41_RS13395 SM00345 helix_turn_helix gluconate operon transcriptional repressor RR41_RS13395 SM00866 RR41_RS13395 RR41_RS13470 SM00822 RR41_RS13470 RR41_RS13475 SM00822 RR41_RS13475 RR41_RS13515 SM00422 helix_turn_helix, mercury resistance RR41_RS13565 SM00345 helix_turn_helix gluconate operon transcriptional repressor RR41_RS13565 SM00895 RR41_RS13565 RR41_RS13580 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain RR41_RS13595 SM00882 Coenzyme A transferase RR41_RS13600 SM00882 Coenzyme A transferase RR41_RS13635 SM00342 helix_turn_helix, arabinose operon control protein RR41_RS13640 SM00903 Flavin reductase like domain RR41_RS13685 SM00347 helix_turn_helix multiple antibiotic resistance protein RR41_RS13705 SM00855 Phosphoglycerate mutase family RR41_RS13725 SM00346 helix_turn_helix isocitrate lyase regulation RR41_RS13730 SM00849 Metallo-beta-lactamase superfamily RR41_RS13750 SM00564 beta-propeller repeat RR41_RS13760 SM00710 Parallel beta-helix repeats RR41_RS13795 SM00998 Adenylosuccinate lyase C-terminus RR41_RS13805 SM00882 Coenzyme A transferase RR41_RS13810 SM00882 Coenzyme A transferase RR41_RS13830 SM01192 RR41_RS13830 RR41_RS13830 SM01193 RR41_RS13830 RR41_RS13895 SM00382 ATPases associated with a variety of cellular activities RR41_RS13895 SM01086 C-terminal, D2-small domain, of ClpB protein RR41_RS13910 SM00859 Semialdehyde dehydrogenase, NAD binding domain RR41_RS13950 SM01264 RR41_RS13950 RR41_RS14015 SM00382 ATPases associated with a variety of cellular activities RR41_RS14015 SM00962 SRP54-type protein, GTPase domain RR41_RS14015 SM00963 SRP54-type protein, helical bundle domain RR41_RS14040 SM00116 Domain in cystathionine beta-synthase and other proteins. RR41_RS14110 SM00347 helix_turn_helix multiple antibiotic resistance protein RR41_RS14120 SM00052 Putative diguanylate phosphodiesterase RR41_RS14120 SM00091 PAS domain RR41_RS14120 SM00267 diguanylate cyclase RR41_RS14165 SM00344 helix_turn_helix ASNC type RR41_RS14555 SM00530 Helix-turn-helix XRE-family like proteins RR41_RS14600 SM00382 ATPases associated with a variety of cellular activities RR41_RS14650 SM00530 Helix-turn-helix XRE-family like proteins RR41_RS14675 SM00479 RR41_RS14675 RR41_RS14715 SM00901 RR41_RS14715 RR41_RS14755 SM01004 Delta-aminolevulinic acid dehydratase RR41_RS14800 SM00382 ATPases associated with a variety of cellular activities RR41_RS14870 SM00563 Phosphate acyltransferases RR41_RS14905 SM00843 RR41_RS14905 RR41_RS14945 SM00838 Elongation factor G C-terminus RR41_RS14945 SM00889 Elongation factor G, domain IV RR41_RS14965 SM00825 Beta-ketoacyl synthase RR41_RS15025 SM01329 RR41_RS15025 RR41_RS15070 SM00363 S4 RNA-binding domain RR41_RS15080 SM00400 zinc finger RR41_RS15080 SM00493 RR41_RS15080 RR41_RS15090 SM00028 Tetratricopeptide repeats RR41_RS15120 SM01400 RR41_RS15120 RR41_RS15165 SM00257 Lysin motif RR41_RS15175 SM00822 RR41_RS15175 RR41_RS15180 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. RR41_RS15215 SM00363 S4 RNA-binding domain RR41_RS15265 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RR41_RS15265 SM00292 breast cancer carboxy-terminal domain RR41_RS15265 SM00532 Ligase N family RR41_RS15270 SM00771 ZipA, C-terminal domain (FtsZ-binding) RR41_RS15280 SM00345 helix_turn_helix gluconate operon transcriptional repressor RR41_RS15300 SM00382 ATPases associated with a variety of cellular activities RR41_RS15300 SM00962 SRP54-type protein, GTPase domain RR41_RS15300 SM00963 SRP54-type protein, helical bundle domain RR41_RS15440 SM00357 Cold shock protein domain RR41_RS15485 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RR41_RS15485 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RR41_RS15490 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region RR41_RS15515 SM00267 diguanylate cyclase RR41_RS15525 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RR41_RS15525 SM00387 Histidine kinase-like ATPases RR41_RS15525 SM00388 His Kinase A (phosphoacceptor) domain RR41_RS15530 SM00448 cheY-homologous receiver domain RR41_RS15530 SM00862 Transcriptional regulatory protein, C terminal RR41_RS15565 SM00903 Flavin reductase like domain RR41_RS15595 SM00342 helix_turn_helix, arabinose operon control protein RR41_RS15865 SM00331 Sigma factor PP2C-like phosphatases RR41_RS15885 SM00347 helix_turn_helix multiple antibiotic resistance protein RR41_RS15895 SM00382 ATPases associated with a variety of cellular activities RR41_RS15915 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs RR41_RS15915 SM00474 3'-5' exonuclease RR41_RS15915 SM00475 5'-3' exonuclease RR41_RS15915 SM00482 DNA polymerase A domain RR41_RS15930 SM00977 TilS substrate C-terminal domain RR41_RS15950 SM00357 Cold shock protein domain RR41_RS15950 SM00382 ATPases associated with a variety of cellular activities RR41_RS15950 SM00959 Rho termination factor, N-terminal domain RR41_RS15960 SM00411 bacterial (prokaryotic) histone like domain RR41_RS15965 SM00873 B3/4 domain RR41_RS15965 SM00874 tRNA synthetase B5 domain RR41_RS15965 SM00896 Ferredoxin-fold anticodon binding domain RR41_RS16020 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain RR41_RS16065 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RR41_RS16080 SM00954 Region found in RelA / SpoT proteins RR41_RS16100 SM00073 Histidine Phosphotransfer domain RR41_RS16100 SM00387 Histidine kinase-like ATPases RR41_RS16100 SM00388 His Kinase A (phosphoacceptor) domain RR41_RS16100 SM00448 cheY-homologous receiver domain RR41_RS16140 SM01002 Alanine dehydrogenase/PNT, C-terminal domain RR41_RS16140 SM01003 Alanine dehydrogenase/PNT, N-terminal domain RR41_RS16225 SM00829 Enoylreductase RR41_RS16265 SM00829 Enoylreductase RR41_RS16275 SM00829 Enoylreductase RR41_RS16280 SM00829 Enoylreductase RR41_RS16290 SM00822 RR41_RS16290 RR41_RS16295 SM00829 Enoylreductase RR41_RS16320 SM00052 Putative diguanylate phosphodiesterase RR41_RS16320 SM00267 diguanylate cyclase RR41_RS16375 SM00382 ATPases associated with a variety of cellular activities RR41_RS16395 SM00479 RR41_RS16395 RR41_RS16405 SM00450 Rhodanese Homology Domain RR41_RS16430 SM00564 beta-propeller repeat RR41_RS16455 SM00028 Tetratricopeptide repeats RR41_RS16465 SM00562 RR41_RS16465 RR41_RS16475 SM00014 Acid phosphatase homologues RR41_RS16485 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RR41_RS16485 SM00245 tail specific protease RR41_RS16560 SM00382 ATPases associated with a variety of cellular activities RR41_RS16560 SM00994 ClpX C4-type zinc finger RR41_RS16560 SM01086 C-terminal, D2-small domain, of ClpB protein RR41_RS16600 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. RR41_RS16605 SM00917 LeuA allosteric (dimerisation) domain RR41_RS16620 SM00671 Sel1-like repeats. RR41_RS16765 SM00360 RNA recognition motif RR41_RS16785 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain RR41_RS16785 SM00437 Bacterial DNA topoisomerase I DNA-binding domain RR41_RS16785 SM00493 RR41_RS16785 RR41_RS16800 SM00829 Enoylreductase RR41_RS16810 SM00382 ATPases associated with a variety of cellular activities RR41_RS16840 SM00859 Semialdehyde dehydrogenase, NAD binding domain RR41_RS16855 SM00870 RR41_RS16855 RR41_RS16865 SM00342 helix_turn_helix, arabinose operon control protein RR41_RS16870 SM00316 Ribosomal protein S1-like RNA-binding domain RR41_RS16885 SM01329 RR41_RS16885 RR41_RS16935 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. RR41_RS16980 SM00363 S4 RNA-binding domain RR41_RS16985 SM00316 Ribosomal protein S1-like RNA-binding domain RR41_RS17015 SM00729 Elongator protein 3, MiaB family, Radical SAM RR41_RS17080 SM00849 Metallo-beta-lactamase superfamily RR41_RS17120 SM00116 Domain in cystathionine beta-synthase and other proteins. RR41_RS17120 SM01091 Transporter associated domain RR41_RS17150 SM00487 DEAD-like helicases superfamily RR41_RS17150 SM00490 helicase superfamily c-terminal domain RR41_RS17170 SM00271 DnaJ molecular chaperone homology domain RR41_RS17185 SM00316 Ribosomal protein S1-like RNA-binding domain RR41_RS17185 SM00322 K homology RNA-binding domain RR41_RS17190 SM01387 RR41_RS17190 RR41_RS17305 SM00316 Ribosomal protein S1-like RNA-binding domain RR41_RS17365 SM00967 RNA 2'-O ribose methyltransferase substrate binding RR41_RS17390 SM00732 Likely ribonuclease with RNase H fold. RR41_RS17410 SM00346 helix_turn_helix isocitrate lyase regulation RR41_RS17420 SM00342 helix_turn_helix, arabinose operon control protein RR41_RS17435 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RR41_RS17435 SM00465 GIY-YIG type nucleases (URI domain) RR41_RS17475 SM00422 helix_turn_helix, mercury resistance RR41_RS17500 SM00387 Histidine kinase-like ATPases RR41_RS17540 SM00663 RNA polymerase I subunit A N-terminus RR41_RS17565 SM00649 Ribosomal protein L11/L12 RR41_RS17570 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. RR41_RS17570 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. RR41_RS17620 SM00240 Forkhead associated domain RR41_RS17630 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RR41_RS17640 SM00528 Domain in histone-like proteins of HNS family RR41_RS17670 SM00448 cheY-homologous receiver domain RR41_RS17670 SM00850 LytTr DNA-binding domain RR41_RS17760 SM00899 RR41_RS17760 RR41_RS17790 SM00421 helix_turn_helix, Lux Regulon RR41_RS17790 SM00448 cheY-homologous receiver domain RR41_RS17795 SM00387 Histidine kinase-like ATPases RR41_RS17795 SM00388 His Kinase A (phosphoacceptor) domain RR41_RS17800 SM00382 ATPases associated with a variety of cellular activities RR41_RS17800 SM00448 cheY-homologous receiver domain RR41_RS17805 SM00245 tail specific protease RR41_RS17870 SM00938 Nitrogen regulatory protein P-II RR41_RS17880 SM00382 ATPases associated with a variety of cellular activities RR41_RS17885 SM00345 helix_turn_helix gluconate operon transcriptional repressor RR41_RS17890 SM01007 Class II Aldolase and Adducin N-terminal domain RR41_RS17895 SM01130 RR41_RS17895 RR41_RS17930 SM00434 DNA Topoisomerase IV RR41_RS17950 SM01091 Transporter associated domain RR41_RS17965 SM00641 Glycosyl hydrolases family 25 RR41_RS17985 SM00729 Elongator protein 3, MiaB family, Radical SAM RR41_RS17995 SM00422 helix_turn_helix, mercury resistance RR41_RS18110 SM00342 helix_turn_helix, arabinose operon control protein RR41_RS18135 SM00382 ATPases associated with a variety of cellular activities RR41_RS18185 SM00382 ATPases associated with a variety of cellular activities RR41_RS18215 SM00919 Malic enzyme, NAD binding domain RR41_RS18215 SM01274 RR41_RS18215 RR41_RS18220 SM00836 DALR anticodon binding domain RR41_RS18220 SM01016 Arginyl tRNA synthetase N terminal dom RR41_RS18370 SM01005 Alanine racemase, C-terminal domain RR41_RS18380 SM00344 helix_turn_helix ASNC type RR41_RS18490 SM00345 helix_turn_helix gluconate operon transcriptional repressor RR41_RS18490 SM00895 RR41_RS18490 RR41_RS18510 SM00345 helix_turn_helix gluconate operon transcriptional repressor RR41_RS18510 SM00895 RR41_RS18510 RR41_RS18535 SM00984 UDP binding domain RR41_RS18610 SM00116 Domain in cystathionine beta-synthase and other proteins. RR41_RS18640 SM00984 UDP binding domain RR41_RS18650 SM00226 Low molecular weight phosphatase family RR41_RS18675 SM00644 RR41_RS18675 RR41_RS18755 SM00062 Bacterial periplasmic substrate-binding proteins RR41_RS18760 SM00062 Bacterial periplasmic substrate-binding proteins RR41_RS18775 SM00382 ATPases associated with a variety of cellular activities RR41_RS18795 SM00904 Riboflavin kinase RR41_RS18820 SM00248 ankyrin repeats RR41_RS18870 SM00849 Metallo-beta-lactamase superfamily RR41_RS18890 SM00235 Zinc-dependent metalloprotease RR41_RS18895 SM00235 Zinc-dependent metalloprotease RR41_RS18915 SM01001 AIR carboxylase RR41_RS18950 SM00014 Acid phosphatase homologues RR41_RS19020 SM01234 RR41_RS19020 RR41_RS19060 SM00387 Histidine kinase-like ATPases