locus-tag class description LO004_RS00005 PF00468 Ribosomal protein L34 LO004_RS00010 PF00825 Ribonuclease P LO004_RS00015 PF01809 Putative membrane protein insertion efficiency factor LO004_RS00020 PF02096 60Kd inner membrane protein LO004_RS00020 PF14849 YidC periplasmic domain LO004_RS00025 PF01926 50S ribosome-binding GTPase LO004_RS00025 PF12631 MnmE helical domain LO004_RS00025 PF10396 GTP-binding protein TrmE N-terminus LO004_RS00030 PF02583 Metal-sensitive transcriptional repressor LO004_RS00035 PF01545 Cation efflux family LO004_RS00035 PF16916 Dimerisation domain of Zinc Transporter LO004_RS00040 PF10411 Disulfide bond isomerase protein N-terminus LO004_RS00040 PF13098 Thioredoxin-like domain LO004_RS00050 PF00156 Phosphoribosyl transferase domain LO004_RS00055 PF01979 Amidohydrolase family LO004_RS00060 PF00355 Rieske [2Fe-2S] domain LO004_RS00065 PF03738 Glutathionylspermidine synthase preATP-grasp LO004_RS00075 PF03741 Integral membrane protein TerC family LO004_RS00080 PF01569 PAP2 superfamily LO004_RS00090 PF01225 Mur ligase family, catalytic domain LO004_RS00090 PF02875 Mur ligase family, glutamate ligase domain LO004_RS00090 PF08245 Mur ligase middle domain LO004_RS00100 PF00731 AIR carboxylase LO004_RS00105 PF02222 ATP-grasp domain LO004_RS00105 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LO004_RS00110 PF13406 Transglycosylase SLT domain LO004_RS00130 PF00012 Hsp70 protein LO004_RS00135 PF01025 GrpE LO004_RS00140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LO004_RS00140 PF03466 LysR substrate binding domain LO004_RS00160 PF07859 alpha/beta hydrolase fold LO004_RS00165 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LO004_RS00205 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LO004_RS00210 PF01252 Signal peptidase (SPase) II LO004_RS00215 PF08264 Anticodon-binding domain of tRNA LO004_RS00215 PF06827 Zinc finger found in FPG and IleRS LO004_RS00215 PF00133 tRNA synthetases class I (I, L, M and V) LO004_RS00220 PF01687 Riboflavin kinase LO004_RS00220 PF06574 FAD synthetase LO004_RS00230 PF01048 Phosphorylase superfamily LO004_RS00235 PF08362 YcdC-like protein, C-terminal region LO004_RS00235 PF00440 Bacterial regulatory proteins, tetR family LO004_RS00240 PF00005 ABC transporter LO004_RS00245 PF00528 Binding-protein-dependent transport system inner membrane component LO004_RS00250 PF00296 Luciferase-like monooxygenase LO004_RS00255 PF09084 NMT1/THI5 like LO004_RS00260 PF09084 NMT1/THI5 like LO004_RS00265 PF00583 Acetyltransferase (GNAT) family LO004_RS00265 PF00696 Amino acid kinase family LO004_RS00280 PF00106 short chain dehydrogenase LO004_RS00285 PF13419 Haloacid dehalogenase-like hydrolase LO004_RS00295 PF01323 DSBA-like thioredoxin domain LO004_RS00300 PF08360 QacR-like protein, C-terminal region LO004_RS00300 PF00440 Bacterial regulatory proteins, tetR family LO004_RS00305 PF00440 Bacterial regulatory proteins, tetR family LO004_RS00310 PF00175 Oxidoreductase NAD-binding domain LO004_RS00315 PF00487 Fatty acid desaturase LO004_RS00320 PF03725 3' exoribonuclease family, domain 2 LO004_RS00320 PF01138 3' exoribonuclease family, domain 1 LO004_RS00330 PF05506 Domain of unknown function (DUF756) LO004_RS00330 PF04185 Phosphoesterase family LO004_RS00340 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LO004_RS00340 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LO004_RS00345 PF01510 N-acetylmuramoyl-L-alanine amidase LO004_RS00350 PF03023 Lipid II flippase MurJ LO004_RS00355 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LO004_RS00355 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LO004_RS00360 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LO004_RS00360 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LO004_RS00365 PF02706 Chain length determinant protein LO004_RS00365 PF13807 G-rich domain on putative tyrosine kinase LO004_RS00365 PF13614 AAA domain LO004_RS00370 PF01451 Low molecular weight phosphotyrosine protein phosphatase LO004_RS00375 PF10531 SLBB domain LO004_RS00375 PF18412 Outer-membrane lipoprotein Wza C-terminal domain LO004_RS00375 PF02563 Polysaccharide biosynthesis/export protein LO004_RS00380 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LO004_RS00380 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LO004_RS00380 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LO004_RS00385 PF02719 Polysaccharide biosynthesis protein LO004_RS00390 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LO004_RS00395 PF02348 Cytidylyltransferase LO004_RS00410 PF08666 SAF domain LO004_RS00410 PF03102 NeuB family LO004_RS00440 PF00535 Glycosyl transferase family 2 LO004_RS00445 PF02397 Bacterial sugar transferase LO004_RS00450 PF00483 Nucleotidyl transferase LO004_RS00455 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LO004_RS00455 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LO004_RS00455 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LO004_RS00460 PF00342 Phosphoglucose isomerase LO004_RS00465 PF16363 GDP-mannose 4,6 dehydratase LO004_RS00480 PF13340 Putative transposase of IS4/5 family (DUF4096) LO004_RS00490 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LO004_RS00490 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LO004_RS00490 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LO004_RS00490 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LO004_RS00495 PF02652 L-lactate permease LO004_RS00500 PF07729 FCD domain LO004_RS00500 PF00392 Bacterial regulatory proteins, gntR family LO004_RS00505 PF01070 FMN-dependent dehydrogenase LO004_RS00510 PF09330 D-lactate dehydrogenase, membrane binding LO004_RS00510 PF01565 FAD binding domain LO004_RS00515 PF00155 Aminotransferase class I and II LO004_RS00525 PF00392 Bacterial regulatory proteins, gntR family LO004_RS00525 PF07729 FCD domain LO004_RS00535 PF00285 Citrate synthase, C-terminal domain LO004_RS00540 PF00694 Aconitase C-terminal domain LO004_RS00540 PF00330 Aconitase family (aconitate hydratase) LO004_RS00560 PF00293 NUDIX domain LO004_RS00580 PF00109 Beta-ketoacyl synthase, N-terminal domain LO004_RS00580 PF02801 Beta-ketoacyl synthase, C-terminal domain LO004_RS00595 PF00849 RNA pseudouridylate synthase LO004_RS00610 PF07715 TonB-dependent Receptor Plug Domain LO004_RS00610 PF00593 TonB dependent receptor LO004_RS00620 PF01037 Lrp/AsnC ligand binding domain LO004_RS00625 PF01266 FAD dependent oxidoreductase LO004_RS00630 PF00842 Alanine racemase, C-terminal domain LO004_RS00630 PF01168 Alanine racemase, N-terminal domain LO004_RS00635 PF01042 Endoribonuclease L-PSP LO004_RS00640 PF00324 Amino acid permease LO004_RS00645 PF00324 Amino acid permease LO004_RS00655 PF00171 Aldehyde dehydrogenase family LO004_RS00660 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LO004_RS00660 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LO004_RS00665 PF00501 AMP-binding enzyme LO004_RS00665 PF13193 AMP-binding enzyme C-terminal domain LO004_RS00670 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LO004_RS00670 PF02770 Acyl-CoA dehydrogenase, middle domain LO004_RS00670 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LO004_RS00675 PF00378 Enoyl-CoA hydratase/isomerase LO004_RS00680 PF00378 Enoyl-CoA hydratase/isomerase LO004_RS00685 PF07690 Major Facilitator Superfamily LO004_RS00685 PF00083 Sugar (and other) transporter LO004_RS00690 PF00765 Autoinducer synthase LO004_RS00700 PF13737 Transposase DDE domain LO004_RS00705 PF00196 Bacterial regulatory proteins, luxR family LO004_RS00705 PF03472 Autoinducer binding domain LO004_RS00710 PF00501 AMP-binding enzyme LO004_RS00715 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LO004_RS00715 PF02770 Acyl-CoA dehydrogenase, middle domain LO004_RS00715 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LO004_RS00720 PF08242 Methyltransferase domain LO004_RS00720 PF00975 Thioesterase domain LO004_RS00720 PF02801 Beta-ketoacyl synthase, C-terminal domain LO004_RS00720 PF14765 Polyketide synthase dehydratase LO004_RS00720 PF00109 Beta-ketoacyl synthase, N-terminal domain LO004_RS00720 PF00550 Phosphopantetheine attachment site LO004_RS00720 PF16197 Ketoacyl-synthetase C-terminal extension LO004_RS00725 PF00975 Thioesterase domain LO004_RS00725 PF00550 Phosphopantetheine attachment site LO004_RS00725 PF00668 Condensation domain LO004_RS00725 PF13193 AMP-binding enzyme C-terminal domain LO004_RS00725 PF00501 AMP-binding enzyme LO004_RS00740 PF16363 GDP-mannose 4,6 dehydratase LO004_RS00745 PF01648 4'-phosphopantetheinyl transferase superfamily LO004_RS00760 PF01722 BolA-like protein LO004_RS00770 PF13614 AAA domain LO004_RS00785 PF09335 SNARE associated Golgi protein LO004_RS00790 PF07681 DoxX LO004_RS00795 PF04286 Protein of unknown function (DUF445) LO004_RS00800 PF00117 Glutamine amidotransferase class-I LO004_RS00800 PF00958 GMP synthase C terminal domain LO004_RS00800 PF02540 NAD synthase LO004_RS00805 PF01909 Nucleotidyltransferase domain LO004_RS00805 PF13427 Domain of unknown function (DUF4111) LO004_RS00810 PF03551 Transcriptional regulator PadR-like family LO004_RS00820 PF05726 Pirin C-terminal cupin domain LO004_RS00820 PF02678 Pirin LO004_RS00840 PF03485 Arginyl tRNA synthetase N terminal domain LO004_RS00840 PF05746 DALR anticodon binding domain LO004_RS00840 PF00750 tRNA synthetases class I (R) LO004_RS00845 PF00390 Malic enzyme, N-terminal domain LO004_RS00845 PF03949 Malic enzyme, NAD binding domain LO004_RS00855 PF04261 Dyp-type peroxidase family LO004_RS00860 PF01810 LysE type translocator LO004_RS00865 PF00950 ABC 3 transport family LO004_RS00870 PF00005 ABC transporter LO004_RS00890 PF00119 ATP synthase A chain LO004_RS00895 PF00137 ATP synthase subunit C LO004_RS00900 PF00430 ATP synthase B/B' CF(0) LO004_RS00905 PF00213 ATP synthase delta (OSCP) subunit LO004_RS00910 PF00306 ATP synthase alpha/beta chain, C terminal domain LO004_RS00910 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LO004_RS00910 PF02874 ATP synthase alpha/beta family, beta-barrel domain LO004_RS00915 PF00231 ATP synthase LO004_RS00920 PF02874 ATP synthase alpha/beta family, beta-barrel domain LO004_RS00920 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LO004_RS00925 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LO004_RS00930 PF11008 Protein of unknown function (DUF2846) LO004_RS00940 PF00255 Glutathione peroxidase LO004_RS00950 PF07690 Major Facilitator Superfamily LO004_RS00955 PF00440 Bacterial regulatory proteins, tetR family LO004_RS00960 PF00892 EamA-like transporter family LO004_RS00965 PF01300 Telomere recombination LO004_RS00970 PF02481 DNA recombination-mediator protein A LO004_RS00970 PF17782 DprA winged helix domain LO004_RS00980 PF01327 Polypeptide deformylase LO004_RS01035 PF00043 Glutathione S-transferase, C-terminal domain LO004_RS01035 PF02798 Glutathione S-transferase, N-terminal domain LO004_RS01045 PF00209 Sodium:neurotransmitter symporter family LO004_RS01055 PF01189 16S rRNA methyltransferase RsmB/F LO004_RS01055 PF01029 NusB family LO004_RS01060 PF02911 Formyl transferase, C-terminal domain LO004_RS01060 PF00551 Formyl transferase LO004_RS01065 PF00920 Dehydratase family LO004_RS01080 PF03466 LysR substrate binding domain LO004_RS01080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LO004_RS01085 PF00860 Permease family LO004_RS01090 PF00311 Phosphoenolpyruvate carboxylase LO004_RS01095 PF08361 MAATS-type transcriptional repressor, C-terminal region LO004_RS01095 PF00440 Bacterial regulatory proteins, tetR family LO004_RS01100 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LO004_RS01105 PF00873 AcrB/AcrD/AcrF family LO004_RS01115 PF00684 DnaJ central domain LO004_RS01115 PF01556 DnaJ C terminal domain LO004_RS01115 PF00226 DnaJ domain LO004_RS01125 PF01113 Dihydrodipicolinate reductase, N-terminus LO004_RS01125 PF05173 Dihydrodipicolinate reductase, C-terminus LO004_RS01135 PF07690 Major Facilitator Superfamily LO004_RS01140 PF00248 Aldo/keto reductase family LO004_RS01145 PF03466 LysR substrate binding domain LO004_RS01145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LO004_RS01160 PF00155 Aminotransferase class I and II LO004_RS01160 PF00392 Bacterial regulatory proteins, gntR family LO004_RS01165 PF00107 Zinc-binding dehydrogenase LO004_RS01165 PF08240 Alcohol dehydrogenase GroES-like domain LO004_RS01170 PF03352 Methyladenine glycosylase LO004_RS01185 PF00633 Helix-hairpin-helix motif LO004_RS01185 PF10576 Iron-sulfur binding domain of endonuclease III LO004_RS01185 PF14815 NUDIX domain LO004_RS01185 PF00730 HhH-GPD superfamily base excision DNA repair protein LO004_RS01195 PF02230 Phospholipase/Carboxylesterase LO004_RS01200 PF07043 Protein of unknown function (DUF1328) LO004_RS01205 PF03692 Putative zinc- or iron-chelating domain LO004_RS01210 PF07995 Glucose / Sorbosone dehydrogenase LO004_RS01215 PF00004 ATPase family associated with various cellular activities (AAA) LO004_RS01215 PF16193 AAA C-terminal domain LO004_RS01215 PF12002 MgsA AAA+ ATPase C terminal LO004_RS01220 PF01226 Formate/nitrite transporter LO004_RS01230 PF01259 SAICAR synthetase LO004_RS01240 PF00701 Dihydrodipicolinate synthetase family LO004_RS01245 PF00857 Isochorismatase family LO004_RS01250 PF01758 Sodium Bile acid symporter family LO004_RS01255 PF01554 MatE LO004_RS01260 PF04463 Protein of unknown function (DUF523) LO004_RS01265 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LO004_RS01275 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LO004_RS01280 PF02798 Glutathione S-transferase, N-terminal domain LO004_RS01280 PF14497 Glutathione S-transferase, C-terminal domain LO004_RS01290 PF00324 Amino acid permease LO004_RS01300 PF07683 Cobalamin synthesis protein cobW C-terminal domain LO004_RS01300 PF02492 CobW/HypB/UreG, nucleotide-binding domain LO004_RS01310 PF00392 Bacterial regulatory proteins, gntR family LO004_RS01310 PF07702 UTRA domain LO004_RS01315 PF05962 HutD LO004_RS01320 PF17392 Urocanase C-terminal domain LO004_RS01320 PF17391 Urocanase N-terminal domain LO004_RS01320 PF01175 Urocanase Rossmann-like domain LO004_RS01325 PF00221 Aromatic amino acid lyase LO004_RS01330 PF00324 Amino acid permease LO004_RS01335 PF01979 Amidohydrolase family LO004_RS01340 PF00491 Arginase family LO004_RS01350 PF13419 Haloacid dehalogenase-like hydrolase LO004_RS01355 PF01177 Asp/Glu/Hydantoin racemase LO004_RS01360 PF01380 SIS domain LO004_RS01365 PF00132 Bacterial transferase hexapeptide (six repeats) LO004_RS01365 PF14602 Hexapeptide repeat of succinyl-transferase LO004_RS01365 PF12804 MobA-like NTP transferase domain LO004_RS01370 PF04608 Phosphatidylglycerophosphatase A LO004_RS01375 PF00586 AIR synthase related protein, N-terminal domain LO004_RS01375 PF02769 AIR synthase related protein, C-terminal domain LO004_RS01380 PF01029 NusB family LO004_RS01385 PF00885 6,7-dimethyl-8-ribityllumazine synthase LO004_RS01390 PF00925 GTP cyclohydrolase II LO004_RS01390 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LO004_RS01415 PF02580 D-Tyr-tRNA(Tyr) deacylase LO004_RS01420 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LO004_RS01420 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LO004_RS01425 PF00581 Rhodanese-like domain LO004_RS01430 PF02666 Phosphatidylserine decarboxylase LO004_RS01435 PF03069 Acetamidase/Formamidase family LO004_RS01450 PF00512 His Kinase A (phospho-acceptor) domain LO004_RS01450 PF00989 PAS fold LO004_RS01450 PF11808 Phosphate regulon sensor protein PhoR LO004_RS01450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LO004_RS01455 PF00072 Response regulator receiver domain LO004_RS01455 PF00486 Transcriptional regulatory protein, C terminal LO004_RS01465 PF00106 short chain dehydrogenase LO004_RS01470 PF01554 MatE LO004_RS01475 PF00155 Aminotransferase class I and II LO004_RS01480 PF04286 Protein of unknown function (DUF445) LO004_RS01495 PF04262 Glutamate-cysteine ligase LO004_RS01500 PF02600 Disulfide bond formation protein DsbB LO004_RS01505 PF13296 Putative type VI secretion system Rhs element Vgr LO004_RS01505 PF04717 Type VI secretion system, phage-baseplate injector LO004_RS01505 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) LO004_RS01515 PF04650 YSIRK type signal peptide LO004_RS01515 PF02216 B domain LO004_RS01515 PF00746 LPXTG cell wall anchor motif LO004_RS01515 PF01476 LysM domain LO004_RS01515 PF03373 Octapeptide repeat LO004_RS01530 PF05728 Uncharacterised protein family (UPF0227) LO004_RS01535 PF00986 DNA gyrase B subunit, carboxyl terminus LO004_RS01535 PF01751 Toprim domain LO004_RS01535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LO004_RS01535 PF00204 DNA gyrase B LO004_RS01540 PF00106 short chain dehydrogenase LO004_RS01545 PF04115 Ureidoglycolate lyase LO004_RS01550 PF03561 Allantoicase repeat LO004_RS01555 PF01494 FAD binding domain LO004_RS01565 PF00860 Permease family LO004_RS01570 PF00576 HIUase/Transthyretin family LO004_RS01600 PF11412 Disulphide bond corrector protein DsbC LO004_RS01600 PF02683 Cytochrome C biogenesis protein transmembrane region LO004_RS01605 PF07694 5TMR of 5TMR-LYT LO004_RS01605 PF00990 Diguanylate cyclase, GGDEF domain LO004_RS01610 PF07859 alpha/beta hydrolase fold LO004_RS01620 PF03960 ArsC family LO004_RS01625 PF03372 Endonuclease/Exonuclease/phosphatase family LO004_RS01630 PF00156 Phosphoribosyl transferase domain LO004_RS01635 PF07715 TonB-dependent Receptor Plug Domain LO004_RS01635 PF00593 TonB dependent receptor LO004_RS01645 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LO004_RS01645 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LO004_RS01650 PF04101 Glycosyltransferase family 28 C-terminal domain LO004_RS01650 PF03033 Glycosyltransferase family 28 N-terminal domain LO004_RS01655 PF01225 Mur ligase family, catalytic domain LO004_RS01655 PF02875 Mur ligase family, glutamate ligase domain LO004_RS01655 PF08245 Mur ligase middle domain LO004_RS01660 PF07478 D-ala D-ala ligase C-terminus LO004_RS01660 PF01820 D-ala D-ala ligase N-terminus LO004_RS01665 PF08478 POTRA domain, FtsQ-type LO004_RS01665 PF03799 Cell division protein FtsQ LO004_RS01670 PF02491 SHS2 domain inserted in FTSA LO004_RS01675 PF12327 FtsZ family, C-terminal domain LO004_RS01675 PF00091 Tubulin/FtsZ family, GTPase domain LO004_RS01680 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LO004_RS01690 PF01551 Peptidase family M23 LO004_RS01695 PF00456 Transketolase, thiamine diphosphate binding domain LO004_RS01695 PF17831 Pyruvate dehydrogenase E1 component middle domain LO004_RS01700 PF02817 e3 binding domain LO004_RS01700 PF00364 Biotin-requiring enzyme LO004_RS01700 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LO004_RS01710 PF01169 Uncharacterized protein family UPF0016 LO004_RS01715 PF07715 TonB-dependent Receptor Plug Domain LO004_RS01715 PF00593 TonB dependent receptor LO004_RS01720 PF01613 Flavin reductase like domain LO004_RS01720 PF00258 Flavodoxin LO004_RS01725 PF03692 Putative zinc- or iron-chelating domain LO004_RS01730 PF00571 CBS domain LO004_RS01730 PF00478 IMP dehydrogenase / GMP reductase domain LO004_RS01735 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LO004_RS01735 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LO004_RS01735 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LO004_RS01735 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LO004_RS01740 PF01243 Pyridoxamine 5'-phosphate oxidase LO004_RS01740 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LO004_RS01745 PF17768 RecJ OB domain LO004_RS01745 PF02272 DHHA1 domain LO004_RS01745 PF01368 DHH family LO004_RS01765 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LO004_RS01770 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LO004_RS01775 PF04452 RNA methyltransferase LO004_RS01780 PF00924 Mechanosensitive ion channel LO004_RS01790 PF16177 Acetyl-coenzyme A synthetase N-terminus LO004_RS01790 PF00501 AMP-binding enzyme LO004_RS01790 PF13193 AMP-binding enzyme C-terminal domain LO004_RS01795 PF00857 Isochorismatase family LO004_RS01800 PF01037 Lrp/AsnC ligand binding domain LO004_RS01805 PF00296 Luciferase-like monooxygenase LO004_RS01810 PF03358 NADPH-dependent FMN reductase LO004_RS01815 PF00072 Response regulator receiver domain LO004_RS01815 PF00196 Bacterial regulatory proteins, luxR family LO004_RS01825 PF01627 Hpt domain LO004_RS01825 PF00072 Response regulator receiver domain LO004_RS01825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LO004_RS01825 PF00672 HAMP domain LO004_RS01825 PF00512 His Kinase A (phospho-acceptor) domain LO004_RS01830 PF04341 Protein of unknown function, DUF485 LO004_RS01835 PF00474 Sodium:solute symporter family LO004_RS01845 PF02028 BCCT, betaine/carnitine/choline family transporter LO004_RS01855 PF00990 Diguanylate cyclase, GGDEF domain LO004_RS01865 PF00005 ABC transporter LO004_RS01865 PF17755 UvrA DNA-binding domain LO004_RS01865 PF17760 UvrA interaction domain LO004_RS01870 PF16925 Tetracyclin repressor-like, C-terminal domain LO004_RS01870 PF00440 Bacterial regulatory proteins, tetR family LO004_RS01875 PF08240 Alcohol dehydrogenase GroES-like domain LO004_RS01875 PF00107 Zinc-binding dehydrogenase LO004_RS01885 PF06942 GlpM protein LO004_RS01890 PF08543 Phosphomethylpyrimidine kinase LO004_RS01890 PF03070 TENA/THI-4/PQQC family LO004_RS01890 PF02581 Thiamine monophosphate synthase LO004_RS01900 PF07690 Major Facilitator Superfamily LO004_RS01905 PF00436 Single-strand binding protein family LO004_RS01915 PF03591 AzlC protein LO004_RS01925 PF00324 Amino acid permease LO004_RS01930 PF00155 Aminotransferase class I and II LO004_RS01930 PF00392 Bacterial regulatory proteins, gntR family LO004_RS01935 PF00202 Aminotransferase class-III LO004_RS01940 PF00171 Aldehyde dehydrogenase family LO004_RS01945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LO004_RS01950 PF00857 Isochorismatase family LO004_RS01955 PF02678 Pirin LO004_RS01955 PF05726 Pirin C-terminal cupin domain LO004_RS01960 PF01593 Flavin containing amine oxidoreductase LO004_RS01980 PF07690 Major Facilitator Superfamily LO004_RS01985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LO004_RS01985 PF03466 LysR substrate binding domain LO004_RS02005 PF00248 Aldo/keto reductase family LO004_RS02010 PF02311 AraC-like ligand binding domain LO004_RS02010 PF12833 Helix-turn-helix domain LO004_RS02035 PF01638 HxlR-like helix-turn-helix LO004_RS02040 PF02525 Flavodoxin-like fold LO004_RS02060 PF02705 K+ potassium transporter LO004_RS02085 PF00230 Major intrinsic protein LO004_RS02100 PF00977 Histidine biosynthesis protein LO004_RS02105 PF01636 Phosphotransferase enzyme family LO004_RS02130 PF00977 Histidine biosynthesis protein LO004_RS02145 PF00117 Glutamine amidotransferase class-I LO004_RS02150 PF00475 Imidazoleglycerol-phosphate dehydratase LO004_RS02170 PF00583 Acetyltransferase (GNAT) family LO004_RS02175 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain LO004_RS02175 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain LO004_RS02185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LO004_RS02185 PF00672 HAMP domain LO004_RS02185 PF00512 His Kinase A (phospho-acceptor) domain LO004_RS02190 PF00072 Response regulator receiver domain LO004_RS02190 PF00486 Transcriptional regulatory protein, C terminal LO004_RS02195 PF17674 HHH domain LO004_RS02195 PF00575 S1 RNA binding domain LO004_RS02195 PF09371 Tex-like protein N-terminal domain LO004_RS02195 PF16921 Tex protein YqgF-like domain LO004_RS02200 PF01740 STAS domain LO004_RS02200 PF00916 Sulfate permease family LO004_RS02205 PF00106 short chain dehydrogenase LO004_RS02210 PF01053 Cys/Met metabolism PLP-dependent enzyme LO004_RS02215 PF00005 ABC transporter LO004_RS02215 PF12848 ABC transporter LO004_RS02240 PF04191 Phospholipid methyltransferase LO004_RS02260 PF00529 HlyD membrane-fusion protein of T1SS LO004_RS02260 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LO004_RS02265 PF00873 AcrB/AcrD/AcrF family LO004_RS02270 PF01545 Cation efflux family LO004_RS02300 PF00324 Amino acid permease LO004_RS02315 PF00749 tRNA synthetases class I (E and Q), catalytic domain LO004_RS02330 PF01795 MraW methylase family LO004_RS02340 PF03717 Penicillin-binding Protein dimerisation domain LO004_RS02340 PF00905 Penicillin binding protein transpeptidase domain LO004_RS02345 PF01225 Mur ligase family, catalytic domain LO004_RS02345 PF02875 Mur ligase family, glutamate ligase domain LO004_RS02345 PF08245 Mur ligase middle domain LO004_RS02350 PF08245 Mur ligase middle domain LO004_RS02350 PF01225 Mur ligase family, catalytic domain LO004_RS02350 PF02875 Mur ligase family, glutamate ligase domain LO004_RS02355 PF00953 Glycosyl transferase family 4 LO004_RS02365 PF13847 Methyltransferase domain LO004_RS02370 PF17092 Penicillin-binding protein OB-like domain LO004_RS02370 PF00912 Transglycosylase LO004_RS02370 PF00905 Penicillin binding protein transpeptidase domain LO004_RS02375 PF11104 Type IV pilus assembly protein PilM; LO004_RS02380 PF05137 Fimbrial assembly protein (PilN) LO004_RS02385 PF04350 Pilus assembly protein, PilO LO004_RS02395 PF11741 AMIN domain LO004_RS02395 PF00263 Bacterial type II and III secretion system protein LO004_RS02395 PF03958 Bacterial type II/III secretion system short domain LO004_RS02395 PF07660 Secretin and TonB N terminus short domain LO004_RS02400 PF01202 Shikimate kinase LO004_RS02405 PF01761 3-dehydroquinate synthase LO004_RS02415 PF00310 Glutamine amidotransferases class-II LO004_RS02415 PF04898 Glutamate synthase central domain LO004_RS02415 PF01645 Conserved region in glutamate synthase LO004_RS02415 PF01493 GXGXG motif LO004_RS02420 PF07992 Pyridine nucleotide-disulphide oxidoreductase LO004_RS02420 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LO004_RS02430 PF04011 LemA family LO004_RS02435 PF04536 TPM domain LO004_RS02445 PF07963 Prokaryotic N-terminal methylation motif LO004_RS02445 PF00114 Pilin (bacterial filament) LO004_RS02455 PF15864 Protein glycosylation ligase LO004_RS02455 PF11846 Virulence factor membrane-bound polymerase, C-terminal LO004_RS02455 PF04932 O-Antigen ligase LO004_RS02460 PF00210 Ferritin-like domain LO004_RS02465 PF04324 BFD-like [2Fe-2S] binding domain LO004_RS02470 PF01042 Endoribonuclease L-PSP LO004_RS02475 PF13291 ACT domain LO004_RS02475 PF04607 Region found in RelA / SpoT proteins LO004_RS02475 PF02824 TGS domain LO004_RS02485 PF01192 RNA polymerase Rpb6 LO004_RS02490 PF00625 Guanylate kinase LO004_RS02495 PF02401 LytB protein LO004_RS02535 PF00886 Ribosomal protein S16 LO004_RS02540 PF05239 PRC-barrel domain LO004_RS02540 PF01782 RimM N-terminal domain LO004_RS02545 PF01746 tRNA (Guanine-1)-methyltransferase LO004_RS02550 PF01245 Ribosomal protein L19 LO004_RS02555 PF00561 alpha/beta hydrolase fold LO004_RS02560 PF03280 Proteobacterial lipase chaperone protein LO004_RS02565 PF09157 Pseudouridine synthase II TruB, C-terminal LO004_RS02565 PF16198 tRNA pseudouridylate synthase B C-terminal domain LO004_RS02565 PF01509 TruB family pseudouridylate synthase (N terminal domain) LO004_RS02570 PF01925 Sulfite exporter TauE/SafE LO004_RS02580 PF00892 EamA-like transporter family LO004_RS02585 PF00892 EamA-like transporter family LO004_RS02590 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LO004_RS02590 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LO004_RS02595 PF02913 FAD linked oxidases, C-terminal domain LO004_RS02595 PF01565 FAD binding domain LO004_RS02605 PF03992 Antibiotic biosynthesis monooxygenase LO004_RS02610 PF02525 Flavodoxin-like fold LO004_RS02620 PF07690 Major Facilitator Superfamily LO004_RS02625 PF12805 FUSC-like inner membrane protein yccS LO004_RS02630 PF00080 Copper/zinc superoxide dismutase (SODC) LO004_RS02635 PF01594 AI-2E family transporter LO004_RS02640 PF13614 AAA domain LO004_RS02670 PF00324 Amino acid permease LO004_RS02675 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LO004_RS02675 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LO004_RS02680 PF00202 Aminotransferase class-III LO004_RS02685 PF04958 Arginine N-succinyltransferase beta subunit LO004_RS02690 PF00171 Aldehyde dehydrogenase family LO004_RS02695 PF04996 Succinylarginine dihydrolase LO004_RS02700 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family LO004_RS02715 PF00082 Subtilase family LO004_RS02715 PF05922 Peptidase inhibitor I9 LO004_RS02730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LO004_RS02730 PF03466 LysR substrate binding domain LO004_RS02735 PF00892 EamA-like transporter family LO004_RS02755 PF02092 Glycyl-tRNA synthetase beta subunit LO004_RS02755 PF05746 DALR anticodon binding domain LO004_RS02765 PF02092 Glycyl-tRNA synthetase beta subunit LO004_RS02765 PF05746 DALR anticodon binding domain LO004_RS02770 PF02091 Glycyl-tRNA synthetase alpha subunit LO004_RS02790 PF00571 CBS domain LO004_RS02795 PF04024 PspC domain LO004_RS02805 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LO004_RS02805 PF12806 Acetyl-CoA dehydrogenase C-terminal like LO004_RS02805 PF02770 Acyl-CoA dehydrogenase, middle domain LO004_RS02805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LO004_RS02815 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LO004_RS02815 PF01488 Shikimate / quinate 5-dehydrogenase LO004_RS02815 PF08501 Shikimate dehydrogenase substrate binding domain LO004_RS02820 PF01218 Coproporphyrinogen III oxidase LO004_RS02825 PF00925 GTP cyclohydrolase II LO004_RS02830 PF02779 Transketolase, pyrimidine binding domain LO004_RS02830 PF02780 Transketolase, C-terminal domain LO004_RS02830 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LO004_RS02835 PF00459 Inositol monophosphatase family LO004_RS02840 PF03880 DbpA RNA binding domain LO004_RS02840 PF00270 DEAD/DEAH box helicase LO004_RS02840 PF12343 Cold shock protein DEAD box A LO004_RS02840 PF00271 Helicase conserved C-terminal domain LO004_RS02850 PF00005 ABC transporter LO004_RS02855 PF02405 Permease MlaE LO004_RS02865 PF05494 MlaC protein LO004_RS02875 PF01544 CorA-like Mg2+ transporter protein LO004_RS02880 PF03641 Possible lysine decarboxylase LO004_RS02885 PF00293 NUDIX domain LO004_RS02890 PF00156 Phosphoribosyl transferase domain LO004_RS02895 PF17191 RecG wedge domain LO004_RS02895 PF00271 Helicase conserved C-terminal domain LO004_RS02895 PF00270 DEAD/DEAH box helicase LO004_RS02910 PF01553 Acyltransferase LO004_RS02920 PF00375 Sodium:dicarboxylate symporter family LO004_RS02930 PF01926 50S ribosome-binding GTPase LO004_RS02935 PF02082 Transcriptional regulator LO004_RS02940 PF00970 Oxidoreductase FAD-binding domain LO004_RS02940 PF00042 Globin LO004_RS02940 PF00175 Oxidoreductase NAD-binding domain LO004_RS02950 PF05872 Bacterial protein of unknown function (DUF853) LO004_RS02955 PF01053 Cys/Met metabolism PLP-dependent enzyme LO004_RS02960 PF00117 Glutamine amidotransferase class-I LO004_RS02965 PF00338 Ribosomal protein S10p/S20e LO004_RS02970 PF00297 Ribosomal protein L3 LO004_RS02975 PF00573 Ribosomal protein L4/L1 family LO004_RS02980 PF00276 Ribosomal protein L23 LO004_RS02985 PF00181 Ribosomal Proteins L2, RNA binding domain LO004_RS02985 PF03947 Ribosomal Proteins L2, C-terminal domain LO004_RS02990 PF00203 Ribosomal protein S19 LO004_RS02995 PF00237 Ribosomal protein L22p/L17e LO004_RS03005 PF00252 Ribosomal protein L16p/L10e LO004_RS03010 PF00831 Ribosomal L29 protein LO004_RS03015 PF00366 Ribosomal protein S17 LO004_RS03020 PF00238 Ribosomal protein L14p/L23e LO004_RS03025 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LO004_RS03025 PF00467 KOW motif LO004_RS03030 PF00673 ribosomal L5P family C-terminus LO004_RS03030 PF00281 Ribosomal protein L5 LO004_RS03035 PF00253 Ribosomal protein S14p/S29e LO004_RS03040 PF00410 Ribosomal protein S8 LO004_RS03045 PF00347 Ribosomal protein L6 LO004_RS03050 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LO004_RS03055 PF03719 Ribosomal protein S5, C-terminal domain LO004_RS03055 PF00333 Ribosomal protein S5, N-terminal domain LO004_RS03060 PF00327 Ribosomal protein L30p/L7e LO004_RS03065 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LO004_RS03070 PF00344 SecY translocase LO004_RS03075 PF00444 Ribosomal protein L36 LO004_RS03080 PF00416 Ribosomal protein S13/S18 LO004_RS03085 PF00411 Ribosomal protein S11 LO004_RS03090 PF00163 Ribosomal protein S4/S9 N-terminal domain LO004_RS03090 PF01479 S4 domain LO004_RS03095 PF01000 RNA polymerase Rpb3/RpoA insert domain LO004_RS03095 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LO004_RS03095 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LO004_RS03100 PF01196 Ribosomal protein L17 LO004_RS03105 PF00743 Flavin-binding monooxygenase-like LO004_RS03110 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LO004_RS03110 PF02770 Acyl-CoA dehydrogenase, middle domain LO004_RS03110 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LO004_RS03115 PF03937 Flavinator of succinate dehydrogenase LO004_RS03145 PF09526 Probable metal-binding protein (DUF2387) LO004_RS03150 PF01432 Peptidase family M3 LO004_RS03155 PF00773 RNB domain LO004_RS03155 PF00575 S1 RNA binding domain LO004_RS03155 PF08206 Ribonuclease B OB domain LO004_RS03155 PF08461 Ribonuclease R winged-helix domain LO004_RS03155 PF17876 Cold shock domain LO004_RS03200 PF01557 Fumarylacetoacetate (FAA) hydrolase family LO004_RS03205 PF12833 Helix-turn-helix domain LO004_RS03210 PF00892 EamA-like transporter family LO004_RS03215 PF03631 Virulence factor BrkB LO004_RS03220 PF03358 NADPH-dependent FMN reductase LO004_RS03245 PF02130 Uncharacterized protein family UPF0054 LO004_RS03250 PF02562 PhoH-like protein LO004_RS03255 PF00919 Uncharacterized protein family UPF0004 LO004_RS03255 PF01938 TRAM domain LO004_RS03255 PF04055 Radical SAM superfamily LO004_RS03260 PF01551 Peptidase family M23 LO004_RS03260 PF01464 Transglycosylase SLT domain LO004_RS03260 PF10145 Phage-related minor tail protein LO004_RS03270 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LO004_RS03270 PF00056 lactate/malate dehydrogenase, NAD binding domain LO004_RS03290 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ LO004_RS03295 PF01066 CDP-alcohol phosphatidyltransferase LO004_RS03340 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LO004_RS03340 PF02770 Acyl-CoA dehydrogenase, middle domain LO004_RS03340 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LO004_RS03345 PF00440 Bacterial regulatory proteins, tetR family LO004_RS03345 PF17932 Tetracyclin repressor-like, C-terminal domain LO004_RS03360 PF01039 Carboxyl transferase domain LO004_RS03365 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LO004_RS03365 PF02770 Acyl-CoA dehydrogenase, middle domain LO004_RS03365 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LO004_RS03375 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LO004_RS03375 PF00364 Biotin-requiring enzyme LO004_RS03375 PF02785 Biotin carboxylase C-terminal domain LO004_RS03375 PF00289 Biotin carboxylase, N-terminal domain LO004_RS03405 PF04386 Stringent starvation protein B LO004_RS03410 PF13417 Glutathione S-transferase, N-terminal domain LO004_RS03410 PF00043 Glutathione S-transferase, C-terminal domain LO004_RS03415 PF00380 Ribosomal protein S9/S16 LO004_RS03420 PF00572 Ribosomal protein L13 LO004_RS03425 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LO004_RS03430 PF00398 Ribosomal RNA adenine dimethylase LO004_RS03435 PF00149 Calcineurin-like phosphoesterase LO004_RS03455 PF16360 GTP-binding GTPase Middle Region LO004_RS03455 PF13167 GTP-binding GTPase N-terminal LO004_RS03455 PF01926 50S ribosome-binding GTPase LO004_RS03465 PF13091 PLD-like domain LO004_RS03470 PF00149 Calcineurin-like phosphoesterase LO004_RS03470 PF10518 TAT (twin-arginine translocation) pathway signal sequence LO004_RS03475 PF00691 OmpA family LO004_RS03475 PF01389 OmpA-like transmembrane domain LO004_RS03480 PF00990 Diguanylate cyclase, GGDEF domain LO004_RS03480 PF17152 Periplasmic sensor domain LO004_RS03515 PF07992 Pyridine nucleotide-disulphide oxidoreductase LO004_RS03515 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LO004_RS03525 PF04273 Putative phosphatase (DUF442) LO004_RS03525 PF00753 Metallo-beta-lactamase superfamily LO004_RS03530 PF00561 alpha/beta hydrolase fold LO004_RS03535 PF00085 Thioredoxin LO004_RS03540 PF03061 Thioesterase superfamily LO004_RS03550 PF04461 Protein of unknown function (DUF520) LO004_RS03560 PF01266 FAD dependent oxidoreductase LO004_RS03560 PF05430 S-adenosyl-L-methionine-dependent methyltransferase LO004_RS03570 PF03795 YCII-related domain LO004_RS03575 PF04279 Intracellular septation protein A LO004_RS03580 PF02811 PHP domain LO004_RS03585 PF01062 Bestrophin, RFP-TM, chloride channel LO004_RS03590 PF04002 RadC-like JAB domain LO004_RS03595 PF04127 DNA / pantothenate metabolism flavoprotein LO004_RS03595 PF02441 Flavoprotein LO004_RS03600 PF07549 SecD/SecF GG Motif LO004_RS03600 PF02355 Protein export membrane protein LO004_RS03605 PF13721 SecD export protein N-terminal TM region LO004_RS03605 PF02355 Protein export membrane protein LO004_RS03605 PF07549 SecD/SecF GG Motif LO004_RS03610 PF02699 Preprotein translocase subunit LO004_RS03615 PF01702 Queuine tRNA-ribosyltransferase LO004_RS03630 PF02547 Queuosine biosynthesis protein LO004_RS03640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LO004_RS03640 PF00512 His Kinase A (phospho-acceptor) domain LO004_RS03640 PF07689 KaiB domain LO004_RS03645 PF08335 GlnD PII-uridylyltransferase LO004_RS03645 PF03710 Glutamate-ammonia ligase adenylyltransferase LO004_RS03650 PF01063 Amino-transferase class IV LO004_RS03660 PF01522 Polysaccharide deacetylase LO004_RS03665 PF00534 Glycosyl transferases group 1 LO004_RS03665 PF13439 Glycosyltransferase Family 4 LO004_RS03675 PF16363 GDP-mannose 4,6 dehydratase LO004_RS03680 PF04321 RmlD substrate binding domain LO004_RS03685 PF00483 Nucleotidyl transferase LO004_RS03690 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LO004_RS03695 PF00535 Glycosyl transferase family 2 LO004_RS03710 PF01336 OB-fold nucleic acid binding domain LO004_RS03710 PF00152 tRNA synthetases class II (D, K and N) LO004_RS03710 PF02938 GAD domain LO004_RS03720 PF07715 TonB-dependent Receptor Plug Domain LO004_RS03720 PF00593 TonB dependent receptor LO004_RS03740 PF06146 Phosphate-starvation-inducible E LO004_RS03745 PF12806 Acetyl-CoA dehydrogenase C-terminal like LO004_RS03745 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LO004_RS03745 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LO004_RS03745 PF02770 Acyl-CoA dehydrogenase, middle domain LO004_RS03750 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LO004_RS03750 PF02770 Acyl-CoA dehydrogenase, middle domain LO004_RS03750 PF12806 Acetyl-CoA dehydrogenase C-terminal like LO004_RS03750 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LO004_RS03760 PF00672 HAMP domain LO004_RS03760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LO004_RS03760 PF00512 His Kinase A (phospho-acceptor) domain LO004_RS03765 PF00486 Transcriptional regulatory protein, C terminal LO004_RS03765 PF00072 Response regulator receiver domain LO004_RS03770 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LO004_RS03790 PF01923 Cobalamin adenosyltransferase LO004_RS03795 PF00593 TonB dependent receptor LO004_RS03795 PF07715 TonB-dependent Receptor Plug Domain LO004_RS03800 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LO004_RS03805 PF00291 Pyridoxal-phosphate dependent enzyme LO004_RS03830 PF00290 Tryptophan synthase alpha chain LO004_RS03835 PF01039 Carboxyl transferase domain LO004_RS03840 PF02875 Mur ligase family, glutamate ligase domain LO004_RS03840 PF08245 Mur ligase middle domain LO004_RS03855 PF00753 Metallo-beta-lactamase superfamily LO004_RS03860 PF10417 C-terminal domain of 1-Cys peroxiredoxin LO004_RS03860 PF00578 AhpC/TSA family LO004_RS03865 PF01043 SecA preprotein cross-linking domain LO004_RS03865 PF02810 SEC-C motif LO004_RS03865 PF07517 SecA DEAD-like domain LO004_RS03865 PF07516 SecA Wing and Scaffold domain LO004_RS03875 PF07690 Major Facilitator Superfamily LO004_RS03875 PF00083 Sugar (and other) transporter LO004_RS03880 PF03006 Haemolysin-III related LO004_RS03905 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LO004_RS03905 PF00378 Enoyl-CoA hydratase/isomerase LO004_RS03905 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LO004_RS03910 PF02803 Thiolase, C-terminal domain LO004_RS03910 PF00108 Thiolase, N-terminal domain LO004_RS03915 PF02311 AraC-like ligand binding domain LO004_RS03915 PF12833 Helix-turn-helix domain LO004_RS03920 PF02515 CoA-transferase family III LO004_RS03925 PF04966 Carbohydrate-selective porin, OprB family LO004_RS03930 PF01011 PQQ enzyme repeat LO004_RS03935 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LO004_RS03935 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LO004_RS03945 PF00893 Small Multidrug Resistance protein LO004_RS03955 PF02803 Thiolase, C-terminal domain LO004_RS03955 PF00108 Thiolase, N-terminal domain LO004_RS03965 PF13505 Outer membrane protein beta-barrel domain LO004_RS03965 PF00691 OmpA family LO004_RS03975 PF01139 tRNA-splicing ligase RtcB LO004_RS03980 PF00324 Amino acid permease LO004_RS03985 PF08468 Methyltransferase small domain N-terminal LO004_RS03985 PF05175 Methyltransferase small domain LO004_RS03990 PF00860 Permease family LO004_RS03995 PF00679 Elongation factor G C-terminus LO004_RS03995 PF00009 Elongation factor Tu GTP binding domain LO004_RS03995 PF03144 Elongation factor Tu domain 2 LO004_RS04000 PF01741 Large-conductance mechanosensitive channel, MscL LO004_RS04015 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LO004_RS04015 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LO004_RS04015 PF06827 Zinc finger found in FPG and IleRS LO004_RS04020 PF02245 Methylpurine-DNA glycosylase (MPG) LO004_RS04025 PF00593 TonB dependent receptor LO004_RS04025 PF07715 TonB-dependent Receptor Plug Domain LO004_RS04030 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LO004_RS04045 PF10411 Disulfide bond isomerase protein N-terminus LO004_RS04045 PF13098 Thioredoxin-like domain LO004_RS04050 PF01571 Aminomethyltransferase folate-binding domain LO004_RS04060 PF04343 Protein of unknown function, DUF488 LO004_RS04065 PF03831 PhnA domain LO004_RS04065 PF08274 PhnA Zinc-Ribbon LO004_RS04070 PF07411 Domain of unknown function (DUF1508) LO004_RS04075 PF03129 Anticodon binding domain LO004_RS04075 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LO004_RS04075 PF04073 Aminoacyl-tRNA editing domain LO004_RS04080 PF00873 AcrB/AcrD/AcrF family LO004_RS04095 PF00072 Response regulator receiver domain LO004_RS04100 PF00072 Response regulator receiver domain LO004_RS04105 PF01584 CheW-like domain LO004_RS04110 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LO004_RS04110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LO004_RS04115 PF01584 CheW-like domain LO004_RS04115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LO004_RS04115 PF01627 Hpt domain LO004_RS04115 PF00072 Response regulator receiver domain LO004_RS04125 PF04055 Radical SAM superfamily LO004_RS04125 PF06969 HemN C-terminal domain LO004_RS04135 PF01546 Peptidase family M20/M25/M40 LO004_RS04135 PF07687 Peptidase dimerisation domain LO004_RS04140 PF08085 Entericidin EcnA/B family LO004_RS04150 PF04304 Protein of unknown function (DUF454) LO004_RS04155 PF01476 LysM domain LO004_RS04155 PF03734 L,D-transpeptidase catalytic domain LO004_RS04195 PF00667 FAD binding domain LO004_RS04195 PF00175 Oxidoreductase NAD-binding domain LO004_RS04195 PF00258 Flavodoxin LO004_RS04205 PF12805 FUSC-like inner membrane protein yccS LO004_RS04210 PF07690 Major Facilitator Superfamily LO004_RS04215 PF00881 Nitroreductase family LO004_RS04230 PF01235 Sodium:alanine symporter family LO004_RS04235 PF01734 Patatin-like phospholipase LO004_RS04240 PF13291 ACT domain LO004_RS04240 PF00291 Pyridoxal-phosphate dependent enzyme LO004_RS04245 PF05992 SbmA/BacA-like family LO004_RS04275 PF02934 GatB/GatE catalytic domain LO004_RS04275 PF02637 GatB domain LO004_RS04280 PF01425 Amidase LO004_RS04285 PF02686 Glu-tRNAGln amidotransferase C subunit LO004_RS04295 PF04085 rod shape-determining protein MreC LO004_RS04300 PF04093 rod shape-determining protein MreD LO004_RS04305 PF02545 Maf-like protein LO004_RS04310 PF10150 Ribonuclease E/G family LO004_RS04310 PF00575 S1 RNA binding domain LO004_RS04320 PF06974 Protein of unknown function (DUF1298) LO004_RS04320 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain LO004_RS04325 PF01507 Phosphoadenosine phosphosulfate reductase family LO004_RS04340 PF02525 Flavodoxin-like fold LO004_RS04360 PF02673 Bacitracin resistance protein BacA LO004_RS04365 PF06719 AraC-type transcriptional regulator N-terminus LO004_RS04365 PF12833 Helix-turn-helix domain LO004_RS04370 PF14765 Polyketide synthase dehydratase LO004_RS04370 PF00109 Beta-ketoacyl synthase, N-terminal domain LO004_RS04370 PF00698 Acyl transferase domain LO004_RS04370 PF08659 KR domain LO004_RS04370 PF08240 Alcohol dehydrogenase GroES-like domain LO004_RS04370 PF02801 Beta-ketoacyl synthase, C-terminal domain LO004_RS04370 PF08990 Erythronolide synthase docking LO004_RS04370 PF00550 Phosphopantetheine attachment site LO004_RS04370 PF09277 Erythronolide synthase, docking LO004_RS04370 PF16197 Ketoacyl-synthetase C-terminal extension LO004_RS04375 PF01965 DJ-1/PfpI family LO004_RS04385 PF00324 Amino acid permease LO004_RS04390 PF04303 PrpF protein LO004_RS04395 PF00348 Polyprenyl synthetase LO004_RS04400 PF04237 YjbR LO004_RS04405 PF01145 SPFH domain / Band 7 family LO004_RS04415 PF01734 Patatin-like phospholipase LO004_RS04435 PF00884 Sulfatase LO004_RS04435 PF08019 Phosphoethanolamine transferase EptA/EptB LO004_RS04440 PF00072 Response regulator receiver domain LO004_RS04440 PF00486 Transcriptional regulatory protein, C terminal LO004_RS04445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LO004_RS04445 PF08521 Two-component sensor kinase N-terminal LO004_RS04445 PF00512 His Kinase A (phospho-acceptor) domain LO004_RS04455 PF00909 Ammonium Transporter Family LO004_RS04460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LO004_RS04460 PF03466 LysR substrate binding domain LO004_RS04480 PF08264 Anticodon-binding domain of tRNA LO004_RS04480 PF00133 tRNA synthetases class I (I, L, M and V) LO004_RS04480 PF10458 Valyl tRNA synthetase tRNA binding arm LO004_RS04500 PF01906 Putative heavy-metal-binding LO004_RS04505 PF01906 Putative heavy-metal-binding LO004_RS04510 PF02321 Outer membrane efflux protein LO004_RS04515 PF00873 AcrB/AcrD/AcrF family LO004_RS04520 PF00529 HlyD membrane-fusion protein of T1SS LO004_RS04520 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LO004_RS04525 PF01569 PAP2 superfamily LO004_RS04535 PF00348 Polyprenyl synthetase LO004_RS04545 PF00829 Ribosomal prokaryotic L21 protein LO004_RS04550 PF01016 Ribosomal L27 protein LO004_RS04555 PF03548 Outer membrane lipoprotein carrier protein LolA LO004_RS04565 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LO004_RS04565 PF02403 Seryl-tRNA synthetase N-terminal domain LO004_RS04570 PF14824 Sirohaem biosynthesis protein central LO004_RS04570 PF10414 Sirohaem synthase dimerisation region LO004_RS04570 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LO004_RS04575 PF00588 SpoU rRNA Methylase family LO004_RS04580 PF01638 HxlR-like helix-turn-helix LO004_RS04585 PF03358 NADPH-dependent FMN reductase LO004_RS04590 PF13520 Amino acid permease LO004_RS04595 PF00465 Iron-containing alcohol dehydrogenase LO004_RS04605 PF03099 Biotin/lipoate A/B protein ligase family LO004_RS04610 PF04359 Protein of unknown function (DUF493) LO004_RS04615 PF04539 Sigma-70 region 3 LO004_RS04615 PF04546 Sigma-70, non-essential region LO004_RS04615 PF03979 Sigma-70 factor, region 1.1 LO004_RS04615 PF00140 Sigma-70 factor, region 1.2 LO004_RS04615 PF04542 Sigma-70 region 2 LO004_RS04615 PF04545 Sigma-70, region 4 LO004_RS04630 PF00581 Rhodanese-like domain LO004_RS04630 PF17773 UPF0176 acylphosphatase like domain LO004_RS04640 PF00285 Citrate synthase, C-terminal domain LO004_RS04645 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LO004_RS04650 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LO004_RS04655 PF02910 Fumarate reductase flavoprotein C-term LO004_RS04655 PF00890 FAD binding domain LO004_RS04660 PF13085 2Fe-2S iron-sulfur cluster binding domain LO004_RS04675 PF16078 2-oxoglutarate dehydrogenase N-terminus LO004_RS04675 PF00676 Dehydrogenase E1 component LO004_RS04675 PF16870 2-oxoglutarate dehydrogenase C-terminal LO004_RS04675 PF02779 Transketolase, pyrimidine binding domain LO004_RS04680 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LO004_RS04680 PF02817 e3 binding domain LO004_RS04680 PF00364 Biotin-requiring enzyme LO004_RS04685 PF07992 Pyridine nucleotide-disulphide oxidoreductase LO004_RS04685 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LO004_RS04690 PF00549 CoA-ligase LO004_RS04690 PF08442 ATP-grasp domain LO004_RS04695 PF00549 CoA-ligase LO004_RS04695 PF02629 CoA binding domain LO004_RS04700 PF00579 tRNA synthetases class I (W and Y) LO004_RS04705 PF05661 Protein of unknown function (DUF808) LO004_RS04710 PF04228 Putative neutral zinc metallopeptidase LO004_RS04715 PF00999 Sodium/hydrogen exchanger family LO004_RS04730 PF09587 Bacterial capsule synthesis protein PGA_cap LO004_RS04740 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LO004_RS04745 PF00582 Universal stress protein family LO004_RS04750 PF00132 Bacterial transferase hexapeptide (six repeats) LO004_RS04755 PF01042 Endoribonuclease L-PSP LO004_RS04765 PF01272 Transcription elongation factor, GreA/GreB, C-term LO004_RS04765 PF03449 Transcription elongation factor, N-terminal LO004_RS04770 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LO004_RS04770 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LO004_RS04770 PF02142 MGS-like domain LO004_RS04775 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LO004_RS04775 PF00117 Glutamine amidotransferase class-I LO004_RS04790 PF01985 CRS1 / YhbY (CRM) domain LO004_RS04795 PF01728 FtsJ-like methyltransferase LO004_RS04800 PF01434 Peptidase family M41 LO004_RS04800 PF00004 ATPase family associated with various cellular activities (AAA) LO004_RS04800 PF17862 AAA+ lid domain LO004_RS04800 PF06480 FtsH Extracellular LO004_RS04805 PF00809 Pterin binding enzyme LO004_RS04840 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LO004_RS04840 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LO004_RS04855 PF00083 Sugar (and other) transporter LO004_RS04860 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LO004_RS04860 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LO004_RS04865 PF01266 FAD dependent oxidoreductase LO004_RS04865 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LO004_RS04870 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain LO004_RS04870 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain LO004_RS04875 PF00781 Diacylglycerol kinase catalytic domain LO004_RS04880 PF00149 Calcineurin-like phosphoesterase LO004_RS04890 PF00166 Chaperonin 10 Kd subunit LO004_RS04895 PF00118 TCP-1/cpn60 chaperonin family LO004_RS04900 PF01219 Prokaryotic diacylglycerol kinase LO004_RS04905 PF00753 Metallo-beta-lactamase superfamily LO004_RS04910 PF03009 Glycerophosphoryl diester phosphodiesterase family LO004_RS04915 PF00873 AcrB/AcrD/AcrF family LO004_RS04925 PF01435 Peptidase family M48 LO004_RS04930 PF01464 Transglycosylase SLT domain LO004_RS04935 PF01171 PP-loop family LO004_RS04945 PF00497 Bacterial extracellular solute-binding proteins, family 3 LO004_RS04945 PF01464 Transglycosylase SLT domain LO004_RS04950 PF03449 Transcription elongation factor, N-terminal LO004_RS04950 PF01272 Transcription elongation factor, GreA/GreB, C-term LO004_RS04965 PF00975 Thioesterase domain LO004_RS04965 PF00550 Phosphopantetheine attachment site LO004_RS04965 PF00668 Condensation domain LO004_RS04965 PF00501 AMP-binding enzyme LO004_RS04965 PF13193 AMP-binding enzyme C-terminal domain LO004_RS04990 PF09857 Putative toxin of bacterial toxin-antitoxin pair LO004_RS05000 PF00881 Nitroreductase family LO004_RS05015 PF02595 Glycerate kinase family LO004_RS05020 PF00384 Molybdopterin oxidoreductase LO004_RS05025 PF02634 FdhD/NarQ family LO004_RS05030 PF06803 Protein of unknown function (DUF1232) LO004_RS05035 PF11890 Domain of unknown function (DUF3410) LO004_RS05035 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LO004_RS05035 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LO004_RS05040 PF00152 tRNA synthetases class II (D, K and N) LO004_RS05050 PF18073 Rubredoxin metal binding domain LO004_RS05055 PF01235 Sodium:alanine symporter family LO004_RS05060 PF00324 Amino acid permease LO004_RS05070 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LO004_RS05070 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LO004_RS05075 PF01678 Diaminopimelate epimerase LO004_RS05080 PF00561 alpha/beta hydrolase fold LO004_RS05085 PF01810 LysE type translocator LO004_RS05090 PF02899 Phage integrase, N-terminal SAM-like domain LO004_RS05090 PF00589 Phage integrase family LO004_RS05095 PF01012 Electron transfer flavoprotein domain LO004_RS05100 PF01012 Electron transfer flavoprotein domain LO004_RS05100 PF00766 Electron transfer flavoprotein FAD-binding domain LO004_RS05105 PF03989 DNA gyrase C-terminal domain, beta-propeller LO004_RS05105 PF00521 DNA gyrase/topoisomerase IV, subunit A LO004_RS05120 PF00535 Glycosyl transferase family 2 LO004_RS05140 PF13533 Biotin-lipoyl like LO004_RS05150 PF00266 Aminotransferase class-V LO004_RS05160 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 LO004_RS05170 PF02687 FtsX-like permease family LO004_RS05170 PF12704 MacB-like periplasmic core domain LO004_RS05175 PF00005 ABC transporter LO004_RS05180 PF03772 Competence protein LO004_RS05180 PF13567 Domain of unknown function (DUF4131) LO004_RS05180 PF00753 Metallo-beta-lactamase superfamily LO004_RS05190 PF06965 Na+/H+ antiporter 1 LO004_RS05190 PF01343 Peptidase family S49 LO004_RS05195 PF12697 Alpha/beta hydrolase family LO004_RS05200 PF00551 Formyl transferase LO004_RS05205 PF00586 AIR synthase related protein, N-terminal domain LO004_RS05205 PF02769 AIR synthase related protein, C-terminal domain LO004_RS05210 PF01594 AI-2E family transporter LO004_RS05215 PF00308 Bacterial dnaA protein LO004_RS05215 PF08299 Bacterial dnaA protein helix-turn-helix LO004_RS05215 PF11638 DnaA N-terminal domain LO004_RS05245 PF00588 SpoU rRNA Methylase family LO004_RS05245 PF08032 RNA 2'-O ribose methyltransferase substrate binding LO004_RS05250 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain LO004_RS05260 PF00691 OmpA family LO004_RS05265 PF07676 WD40-like Beta Propeller Repeat LO004_RS05265 PF04052 TolB amino-terminal domain LO004_RS05275 PF02472 Biopolymer transport protein ExbD/TolR LO004_RS05280 PF01618 MotA/TolQ/ExbB proton channel family LO004_RS05285 PF03061 Thioesterase superfamily LO004_RS05290 PF07687 Peptidase dimerisation domain LO004_RS05290 PF01546 Peptidase family M20/M25/M40 LO004_RS05295 PF17864 RuvB AAA lid domain LO004_RS05295 PF05491 RuvB C-terminal winged helix domain LO004_RS05295 PF05496 Holliday junction DNA helicase RuvB P-loop domain LO004_RS05300 PF07499 RuvA, C-terminal domain LO004_RS05300 PF01330 RuvA N terminal domain LO004_RS05305 PF01966 HD domain LO004_RS05310 PF02769 AIR synthase related protein, C-terminal domain LO004_RS05310 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LO004_RS05310 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal LO004_RS05315 PF07690 Major Facilitator Superfamily LO004_RS05325 PF01784 NIF3 (NGG1p interacting factor 3) LO004_RS05330 PF00378 Enoyl-CoA hydratase/isomerase LO004_RS05335 PF01467 Cytidylyltransferase-like LO004_RS05335 PF00293 NUDIX domain LO004_RS05345 PF00578 AhpC/TSA family LO004_RS05360 PF06508 Queuosine biosynthesis protein QueC LO004_RS05370 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal LO004_RS05370 PF00132 Bacterial transferase hexapeptide (six repeats) LO004_RS05370 PF14602 Hexapeptide repeat of succinyl-transferase LO004_RS05380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LO004_RS05380 PF03466 LysR substrate binding domain LO004_RS05385 PF00005 ABC transporter LO004_RS05385 PF12857 TOBE-like domain LO004_RS05390 PF00528 Binding-protein-dependent transport system inner membrane component LO004_RS05395 PF00528 Binding-protein-dependent transport system inner membrane component LO004_RS05410 PF01063 Amino-transferase class IV LO004_RS05415 PF02618 YceG-like family LO004_RS05420 PF02223 Thymidylate kinase LO004_RS05430 PF02910 Fumarate reductase flavoprotein C-term LO004_RS05430 PF00890 FAD binding domain LO004_RS05435 PF13180 PDZ domain LO004_RS05445 PF13302 Acetyltransferase (GNAT) domain LO004_RS05450 PF00679 Elongation factor G C-terminus LO004_RS05450 PF00009 Elongation factor Tu GTP binding domain LO004_RS05450 PF03144 Elongation factor Tu domain 2 LO004_RS05450 PF06421 GTP-binding protein LepA C-terminus LO004_RS05455 PF10502 Signal peptidase, peptidase S26 LO004_RS05465 PF00035 Double-stranded RNA binding motif LO004_RS05465 PF14622 Ribonuclease-III-like LO004_RS05470 PF07650 KH domain LO004_RS05470 PF01926 50S ribosome-binding GTPase LO004_RS05480 PF02565 Recombination protein O C terminal LO004_RS05480 PF11967 Recombination protein O N terminal LO004_RS05485 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LO004_RS05490 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) LO004_RS05495 PF00106 short chain dehydrogenase LO004_RS05525 PF00155 Aminotransferase class I and II LO004_RS05535 PF17151 Periplasmic sensor domain LO004_RS05535 PF00990 Diguanylate cyclase, GGDEF domain LO004_RS05545 PF04851 Type III restriction enzyme, res subunit LO004_RS05545 PF02151 UvrB/uvrC motif LO004_RS05545 PF12344 Ultra-violet resistance protein B LO004_RS05545 PF17757 UvrB interaction domain LO004_RS05545 PF00271 Helicase conserved C-terminal domain LO004_RS05555 PF00892 EamA-like transporter family LO004_RS05560 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LO004_RS05560 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LO004_RS05575 PF01018 GTP1/OBG LO004_RS05575 PF01926 50S ribosome-binding GTPase LO004_RS05580 PF01472 PUA domain LO004_RS05580 PF00696 Amino acid kinase family LO004_RS05590 PF07759 Protein of unknown function (DUF1615) LO004_RS05595 PF01207 Dihydrouridine synthase (Dus) LO004_RS05600 PF03060 Nitronate monooxygenase LO004_RS05615 PF02350 UDP-N-acetylglucosamine 2-epimerase LO004_RS05645 PF00875 DNA photolyase LO004_RS05645 PF03441 FAD binding domain of DNA photolyase LO004_RS05650 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LO004_RS05655 PF07992 Pyridine nucleotide-disulphide oxidoreductase LO004_RS05660 PF00768 D-alanyl-D-alanine carboxypeptidase LO004_RS05660 PF07943 Penicillin-binding protein 5, C-terminal domain LO004_RS05670 PF03971 Monomeric isocitrate dehydrogenase LO004_RS05675 PF00849 RNA pseudouridylate synthase LO004_RS05680 PF00180 Isocitrate/isopropylmalate dehydrogenase LO004_RS05700 PF06779 Uncharacterised MFS-type transporter YbfB LO004_RS05705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LO004_RS05705 PF03466 LysR substrate binding domain LO004_RS05710 PF00375 Sodium:dicarboxylate symporter family LO004_RS05715 PF02567 Phenazine biosynthesis-like protein LO004_RS05720 PF00675 Insulinase (Peptidase family M16) LO004_RS05720 PF05193 Peptidase M16 inactive domain LO004_RS05745 PF02581 Thiamine monophosphate synthase LO004_RS05750 PF00202 Aminotransferase class-III LO004_RS05760 PF00849 RNA pseudouridylate synthase LO004_RS05765 PF00271 Helicase conserved C-terminal domain LO004_RS05765 PF12137 RNA polymerase recycling family C-terminal LO004_RS05765 PF00176 SNF2 family N-terminal domain LO004_RS05765 PF18339 RapA N-terminal Tudor like domain 1 LO004_RS05765 PF18337 RapA N-terminal Tudor like domain LO004_RS05775 PF00440 Bacterial regulatory proteins, tetR family LO004_RS05780 PF00970 Oxidoreductase FAD-binding domain LO004_RS05780 PF00111 2Fe-2S iron-sulfur cluster binding domain LO004_RS05780 PF00175 Oxidoreductase NAD-binding domain LO004_RS05785 PF00487 Fatty acid desaturase LO004_RS05795 PF17754 MftR C-terminal domain LO004_RS05795 PF00440 Bacterial regulatory proteins, tetR family LO004_RS05805 PF00202 Aminotransferase class-III LO004_RS05810 PF00282 Pyridoxal-dependent decarboxylase conserved domain LO004_RS05815 PF00171 Aldehyde dehydrogenase family LO004_RS05820 PF01037 Lrp/AsnC ligand binding domain LO004_RS05825 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LO004_RS05825 PF00205 Thiamine pyrophosphate enzyme, central domain LO004_RS05825 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LO004_RS05830 PF00324 Amino acid permease LO004_RS05835 PF12849 PBP superfamily domain LO004_RS05840 PF00528 Binding-protein-dependent transport system inner membrane component LO004_RS05845 PF00528 Binding-protein-dependent transport system inner membrane component LO004_RS05850 PF00005 ABC transporter LO004_RS05855 PF01343 Peptidase family S49 LO004_RS05855 PF08496 Peptidase family S49 N-terminal LO004_RS05870 PF08328 Adenylosuccinate lyase C-terminal LO004_RS05870 PF00206 Lyase LO004_RS05875 PF04356 Protein of unknown function (DUF489) LO004_RS05885 PF13344 Haloacid dehalogenase-like hydrolase LO004_RS05885 PF00293 NUDIX domain LO004_RS05890 PF00132 Bacterial transferase hexapeptide (six repeats) LO004_RS05895 PF00768 D-alanyl-D-alanine carboxypeptidase LO004_RS05895 PF07943 Penicillin-binding protein 5, C-terminal domain LO004_RS05910 PF01975 Survival protein SurE LO004_RS05915 PF01476 LysM domain LO004_RS05915 PF01551 Peptidase family M23 LO004_RS05920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LO004_RS05920 PF03466 LysR substrate binding domain LO004_RS05925 PF13654 AAA domain LO004_RS05925 PF05362 Lon protease (S16) C-terminal proteolytic domain LO004_RS05930 PF07690 Major Facilitator Superfamily LO004_RS05935 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LO004_RS05940 PF13593 SBF-like CPA transporter family (DUF4137) LO004_RS05945 PF01197 Ribosomal protein L31 LO004_RS05950 PF12792 CSS motif domain associated with EAL LO004_RS05950 PF00563 EAL domain LO004_RS05960 PF04055 Radical SAM superfamily LO004_RS05965 PF01132 Elongation factor P (EF-P) OB domain LO004_RS05965 PF08207 Elongation factor P (EF-P) KOW-like domain LO004_RS05965 PF09285 Elongation factor P, C-terminal LO004_RS05970 PF02554 Carbon starvation protein CstA LO004_RS05970 PF13722 5TM C-terminal transporter carbon starvation CstA LO004_RS05975 PF04328 Selenoprotein, putative LO004_RS06025 PF02678 Pirin LO004_RS06025 PF17954 Quercetinase C-terminal cupin domain LO004_RS06030 PF00291 Pyridoxal-phosphate dependent enzyme LO004_RS06035 PF13309 HTH domain LO004_RS06035 PF08348 YheO-like PAS domain LO004_RS06045 PF00501 AMP-binding enzyme LO004_RS06045 PF13193 AMP-binding enzyme C-terminal domain LO004_RS06045 PF00668 Condensation domain LO004_RS06050 PF00501 AMP-binding enzyme LO004_RS06050 PF13193 AMP-binding enzyme C-terminal domain LO004_RS06050 PF00550 Phosphopantetheine attachment site LO004_RS06050 PF00975 Thioesterase domain LO004_RS06050 PF00668 Condensation domain LO004_RS06055 PF01032 FecCD transport family LO004_RS06060 PF01032 FecCD transport family LO004_RS06065 PF00005 ABC transporter LO004_RS06070 PF01497 Periplasmic binding protein LO004_RS06075 PF00593 TonB dependent receptor LO004_RS06075 PF07715 TonB-dependent Receptor Plug Domain LO004_RS06080 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) LO004_RS06085 PF00501 AMP-binding enzyme LO004_RS06085 PF00668 Condensation domain LO004_RS06085 PF00550 Phosphopantetheine attachment site LO004_RS06090 PF00501 AMP-binding enzyme LO004_RS06090 PF13193 AMP-binding enzyme C-terminal domain LO004_RS06095 PF00550 Phosphopantetheine attachment site LO004_RS06095 PF00857 Isochorismatase family LO004_RS06100 PF00282 Pyridoxal-dependent decarboxylase conserved domain LO004_RS06110 PF00005 ABC transporter LO004_RS06110 PF00664 ABC transporter transmembrane region LO004_RS06115 PF00005 ABC transporter LO004_RS06120 PF00975 Thioesterase domain LO004_RS06130 PF00425 chorismate binding enzyme LO004_RS06140 PF01208 Uroporphyrinogen decarboxylase (URO-D) LO004_RS06145 PF05675 Protein of unknown function (DUF817) LO004_RS06160 PF00144 Beta-lactamase LO004_RS06165 PF01227 GTP cyclohydrolase I LO004_RS06170 PF01799 [2Fe-2S] binding domain LO004_RS06170 PF00111 2Fe-2S iron-sulfur cluster binding domain LO004_RS06175 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LO004_RS06175 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LO004_RS06190 PF00218 Indole-3-glycerol phosphate synthase LO004_RS06195 PF00591 Glycosyl transferase family, a/b domain LO004_RS06195 PF02885 Glycosyl transferase family, helical bundle domain LO004_RS06200 PF00593 TonB dependent receptor LO004_RS06200 PF07715 TonB-dependent Receptor Plug Domain LO004_RS06205 PF01433 Peptidase family M1 domain LO004_RS06205 PF11838 ERAP1-like C-terminal domain LO004_RS06210 PF00117 Glutamine amidotransferase class-I LO004_RS06220 PF00854 POT family LO004_RS06225 PF00120 Glutamine synthetase, catalytic domain LO004_RS06225 PF03951 Glutamine synthetase, beta-Grasp domain LO004_RS06230 PF04345 Chorismate lyase LO004_RS06235 PF01040 UbiA prenyltransferase family LO004_RS06270 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LO004_RS06270 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LO004_RS06275 PF01784 NIF3 (NGG1p interacting factor 3) LO004_RS06280 PF13180 PDZ domain LO004_RS06285 PF01743 Poly A polymerase head domain LO004_RS06285 PF12627 Probable RNA and SrmB- binding site of polymerase A LO004_RS06290 PF01515 Phosphate acetyl/butaryl transferase LO004_RS06290 PF00390 Malic enzyme, N-terminal domain LO004_RS06290 PF03949 Malic enzyme, NAD binding domain LO004_RS06295 PF00990 Diguanylate cyclase, GGDEF domain LO004_RS06295 PF03707 Bacterial signalling protein N terminal repeat LO004_RS06295 PF00563 EAL domain LO004_RS06300 PF04452 RNA methyltransferase LO004_RS06305 PF02219 Methylenetetrahydrofolate reductase LO004_RS06310 PF05221 S-adenosyl-L-homocysteine hydrolase LO004_RS06310 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain LO004_RS06325 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LO004_RS06325 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LO004_RS06325 PF09317 Domain of unknown function (DUF1974) LO004_RS06330 PF04055 Radical SAM superfamily LO004_RS06335 PF07992 Pyridine nucleotide-disulphide oxidoreductase LO004_RS06335 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LO004_RS06345 PF07690 Major Facilitator Superfamily LO004_RS06355 PF00557 Metallopeptidase family M24 LO004_RS06360 PF00318 Ribosomal protein S2 LO004_RS06365 PF00889 Elongation factor TS LO004_RS06375 PF12833 Helix-turn-helix domain LO004_RS06395 PF03330 Lytic transglycolase LO004_RS06395 PF05036 Sporulation related domain LO004_RS06400 PF13406 Transglycosylase SLT domain LO004_RS06405 PF01098 Cell cycle protein LO004_RS06415 PF14489 QueF-like protein LO004_RS06415 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term LO004_RS06420 PF01061 ABC-2 type transporter LO004_RS06425 PF00005 ABC transporter LO004_RS06430 PF00589 Phage integrase family LO004_RS06470 PF12684 PDDEXK-like domain of unknown function (DUF3799) LO004_RS06470 PF06630 Enterobacterial exodeoxyribonuclease VIII LO004_RS06545 PF00772 DnaB-like helicase N terminal domain LO004_RS06545 PF03796 DnaB-like helicase C terminal domain LO004_RS06625 PF03592 Terminase small subunit LO004_RS06810 PF00464 Serine hydroxymethyltransferase LO004_RS06815 PF02321 Outer membrane efflux protein LO004_RS06820 PF00873 AcrB/AcrD/AcrF family LO004_RS06825 PF13533 Biotin-lipoyl like LO004_RS06830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LO004_RS06830 PF03466 LysR substrate binding domain LO004_RS06835 PF00893 Small Multidrug Resistance protein LO004_RS06840 PF00037 4Fe-4S binding domain LO004_RS06845 PF01136 Peptidase family U32 LO004_RS06845 PF16325 Peptidase family U32 C-terminal domain LO004_RS06855 PF02567 Phenazine biosynthesis-like protein LO004_RS06860 PF00175 Oxidoreductase NAD-binding domain LO004_RS06860 PF00970 Oxidoreductase FAD-binding domain LO004_RS06865 PF18389 TrmO C-terminal domain LO004_RS06865 PF01980 tRNA-methyltransferase O LO004_RS06875 PF00437 Type II/IV secretion system protein LO004_RS06875 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LO004_RS06885 PF00072 Response regulator receiver domain LO004_RS06885 PF00486 Transcriptional regulatory protein, C terminal LO004_RS06890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LO004_RS06890 PF00512 His Kinase A (phospho-acceptor) domain LO004_RS06890 PF08521 Two-component sensor kinase N-terminal LO004_RS06900 PF00293 NUDIX domain LO004_RS06910 PF00912 Transglycosylase LO004_RS06910 PF00905 Penicillin binding protein transpeptidase domain LO004_RS06910 PF14814 Bifunctional transglycosylase second domain LO004_RS06915 PF01513 ATP-NAD kinase LO004_RS06920 PF07023 Protein of unknown function (DUF1315) LO004_RS06925 PF02885 Glycosyl transferase family, helical bundle domain LO004_RS06925 PF00591 Glycosyl transferase family, a/b domain LO004_RS06930 PF00375 Sodium:dicarboxylate symporter family LO004_RS06935 PF02770 Acyl-CoA dehydrogenase, middle domain LO004_RS06935 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LO004_RS06935 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LO004_RS06945 PF01842 ACT domain LO004_RS06945 PF00800 Prephenate dehydratase LO004_RS06945 PF01817 Chorismate mutase type II LO004_RS06950 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LO004_RS06960 PF07687 Peptidase dimerisation domain LO004_RS06960 PF01546 Peptidase family M20/M25/M40 LO004_RS06965 PF01137 RNA 3'-terminal phosphate cyclase LO004_RS06965 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain LO004_RS06980 PF01139 tRNA-splicing ligase RtcB LO004_RS06985 PF00753 Metallo-beta-lactamase superfamily LO004_RS06990 PF06956 Regulator of RNA terminal phosphate cyclase LO004_RS06990 PF00158 Sigma-54 interaction domain LO004_RS07000 PF03883 Peroxide stress protein YaaA LO004_RS07010 PF05690 Thiazole biosynthesis protein ThiG LO004_RS07020 PF04241 Protein of unknown function (DUF423) LO004_RS07025 PF00140 Sigma-70 factor, region 1.2 LO004_RS07025 PF04542 Sigma-70 region 2 LO004_RS07025 PF04545 Sigma-70, region 4 LO004_RS07040 PF00313 'Cold-shock' DNA-binding domain LO004_RS07045 PF00270 DEAD/DEAH box helicase LO004_RS07045 PF00271 Helicase conserved C-terminal domain LO004_RS07055 PF00881 Nitroreductase family LO004_RS07060 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LO004_RS07060 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LO004_RS07080 PF01180 Dihydroorotate dehydrogenase LO004_RS07085 PF02674 Colicin V production protein LO004_RS07090 PF00156 Phosphoribosyl transferase domain LO004_RS07105 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LO004_RS07105 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LO004_RS07110 PF01435 Peptidase family M48 LO004_RS07115 PF09424 Yqey-like protein LO004_RS07120 PF01165 Ribosomal protein S21 LO004_RS07125 PF00814 Glycoprotease family LO004_RS07145 PF00069 Protein kinase domain LO004_RS07170 PF08479 POTRA domain, ShlB-type LO004_RS07170 PF17287 POTRA domain LO004_RS07170 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB LO004_RS07175 PF13018 Extended Signal Peptide of Type V secretion system LO004_RS07175 PF13332 Hemagglutinin repeat LO004_RS07175 PF05860 haemagglutination activity domain LO004_RS07175 PF04829 Pre-toxin domain with VENN motif LO004_RS07185 PF04829 Pre-toxin domain with VENN motif LO004_RS07185 PF13332 Hemagglutinin repeat LO004_RS07185 PF05594 Haemagluttinin repeat LO004_RS07235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LO004_RS07235 PF03466 LysR substrate binding domain LO004_RS07240 PF00202 Aminotransferase class-III LO004_RS07245 PF00171 Aldehyde dehydrogenase family LO004_RS07250 PF00324 Amino acid permease LO004_RS07280 PF04076 Bacterial OB fold (BOF) protein LO004_RS07305 PF00561 alpha/beta hydrolase fold LO004_RS07310 PF03616 Sodium/glutamate symporter LO004_RS07320 PF00392 Bacterial regulatory proteins, gntR family LO004_RS07320 PF07729 FCD domain LO004_RS07370 PF08946 Osmosensory transporter coiled coil LO004_RS07370 PF00083 Sugar (and other) transporter LO004_RS07375 PF00293 NUDIX domain LO004_RS07410 PF04403 Paraquat-inducible protein A LO004_RS07415 PF02470 MlaD protein LO004_RS07425 PF00576 HIUase/Transthyretin family LO004_RS07435 PF00072 Response regulator receiver domain LO004_RS07435 PF00486 Transcriptional regulatory protein, C terminal LO004_RS07440 PF00672 HAMP domain LO004_RS07440 PF00512 His Kinase A (phospho-acceptor) domain LO004_RS07440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LO004_RS07480 PF00512 His Kinase A (phospho-acceptor) domain LO004_RS07480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LO004_RS07480 PF08521 Two-component sensor kinase N-terminal LO004_RS07485 PF00072 Response regulator receiver domain LO004_RS07485 PF00486 Transcriptional regulatory protein, C terminal LO004_RS07505 PF01177 Asp/Glu/Hydantoin racemase LO004_RS07510 PF00892 EamA-like transporter family LO004_RS07515 PF07995 Glucose / Sorbosone dehydrogenase LO004_RS07535 PF00375 Sodium:dicarboxylate symporter family LO004_RS07545 PF00753 Metallo-beta-lactamase superfamily LO004_RS07545 PF16123 Hydroxyacylglutathione hydrolase C-terminus LO004_RS07550 PF00528 Binding-protein-dependent transport system inner membrane component LO004_RS07555 PF00005 ABC transporter LO004_RS07555 PF09383 NIL domain LO004_RS07560 PF03180 NLPA lipoprotein LO004_RS07565 PF02844 Phosphoribosylglycinamide synthetase, N domain LO004_RS07565 PF02843 Phosphoribosylglycinamide synthetase, C domain LO004_RS07565 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LO004_RS07570 PF02142 MGS-like domain LO004_RS07570 PF01808 AICARFT/IMPCHase bienzyme LO004_RS07575 PF02954 Bacterial regulatory protein, Fis family LO004_RS07595 PF13932 GidA associated domain LO004_RS07595 PF01134 Glucose inhibited division protein A LO004_RS07605 PF14403 Circularly permuted ATP-grasp type 2 LO004_RS07615 PF08379 Bacterial transglutaminase-like N-terminal region LO004_RS07615 PF01841 Transglutaminase-like superfamily LO004_RS07625 PF00842 Alanine racemase, C-terminal domain LO004_RS07625 PF01168 Alanine racemase, N-terminal domain LO004_RS07630 PF00772 DnaB-like helicase N terminal domain LO004_RS07630 PF03796 DnaB-like helicase C terminal domain LO004_RS07635 PF01281 Ribosomal protein L9, N-terminal domain LO004_RS07635 PF03948 Ribosomal protein L9, C-terminal domain LO004_RS07640 PF01084 Ribosomal protein S18 LO004_RS07645 PF01250 Ribosomal protein S6 LO004_RS07650 PF01040 UbiA prenyltransferase family LO004_RS07655 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LO004_RS07660 PF00510 Cytochrome c oxidase subunit III LO004_RS07665 PF00115 Cytochrome C and Quinol oxidase polypeptide I LO004_RS07670 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LO004_RS07670 PF06481 COX Aromatic Rich Motif LO004_RS07680 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LO004_RS07680 PF02896 PEP-utilising enzyme, TIM barrel domain LO004_RS07680 PF00391 PEP-utilising enzyme, mobile domain LO004_RS07685 PF03618 Kinase/pyrophosphorylase LO004_RS07695 PF01522 Polysaccharide deacetylase LO004_RS07695 PF14883 Hypothetical glycosyl hydrolase family 13 LO004_RS07700 PF00535 Glycosyl transferase family 2 LO004_RS07705 PF13994 PgaD-like protein LO004_RS07715 PF00296 Luciferase-like monooxygenase LO004_RS07730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LO004_RS07730 PF03466 LysR substrate binding domain LO004_RS07740 PF03462 PCRF domain LO004_RS07740 PF00472 RF-1 domain LO004_RS07745 PF13847 Methyltransferase domain LO004_RS07745 PF17827 PrmC N-terminal domain LO004_RS07750 PF00528 Binding-protein-dependent transport system inner membrane component LO004_RS07755 PF09084 NMT1/THI5 like LO004_RS07760 PF12833 Helix-turn-helix domain LO004_RS07765 PF00106 short chain dehydrogenase LO004_RS07770 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LO004_RS07770 PF02770 Acyl-CoA dehydrogenase, middle domain LO004_RS07770 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LO004_RS07775 PF13193 AMP-binding enzyme C-terminal domain LO004_RS07775 PF00501 AMP-binding enzyme LO004_RS07780 PF01613 Flavin reductase like domain LO004_RS07785 PF00899 ThiF family LO004_RS07790 PF03109 ABC1 family LO004_RS07805 PF03814 Potassium-transporting ATPase A subunit LO004_RS07815 PF02669 K+-transporting ATPase, c chain LO004_RS07820 PF13493 Domain of unknown function (DUF4118) LO004_RS07820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LO004_RS07820 PF00512 His Kinase A (phospho-acceptor) domain LO004_RS07820 PF02702 Osmosensitive K+ channel His kinase sensor domain LO004_RS07825 PF00072 Response regulator receiver domain LO004_RS07825 PF00486 Transcriptional regulatory protein, C terminal LO004_RS07830 PF00120 Glutamine synthetase, catalytic domain LO004_RS07840 PF03232 Ubiquinone biosynthesis protein COQ7 LO004_RS07845 PF07690 Major Facilitator Superfamily LO004_RS07850 PF01103 Surface antigen LO004_RS07850 PF07244 Surface antigen variable number repeat LO004_RS07850 PF17243 POTRA domain TamA domain 1 LO004_RS07865 PF00330 Aconitase family (aconitate hydratase) LO004_RS07865 PF06434 Aconitate hydratase 2 N-terminus LO004_RS07865 PF11791 Aconitate B N-terminal domain LO004_RS07875 PF00520 Ion transport protein LO004_RS07875 PF00027 Cyclic nucleotide-binding domain LO004_RS07880 PF07690 Major Facilitator Superfamily LO004_RS07895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LO004_RS07895 PF03466 LysR substrate binding domain LO004_RS07900 PF04284 Protein of unknown function (DUF441) LO004_RS07910 PF01479 S4 domain LO004_RS07910 PF00849 RNA pseudouridylate synthase LO004_RS07925 PF01479 S4 domain LO004_RS07925 PF00849 RNA pseudouridylate synthase LO004_RS07930 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LO004_RS07935 PF01119 DNA mismatch repair protein, C-terminal domain LO004_RS07935 PF08676 MutL C terminal dimerisation domain LO004_RS07945 PF17209 Hfq protein LO004_RS07955 PF00881 Nitroreductase family LO004_RS07965 PF00149 Calcineurin-like phosphoesterase LO004_RS07970 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LO004_RS07975 PF00749 tRNA synthetases class I (E and Q), catalytic domain LO004_RS07975 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LO004_RS07980 PF00117 Glutamine amidotransferase class-I LO004_RS07980 PF00958 GMP synthase C terminal domain LO004_RS07980 PF02540 NAD synthase LO004_RS07985 PF05985 Ethanolamine ammonia-lyase light chain (EutC) LO004_RS07990 PF06751 Ethanolamine ammonia lyase large subunit (EutB) LO004_RS07995 PF13520 Amino acid permease LO004_RS08000 PF00171 Aldehyde dehydrogenase family LO004_RS08015 PF00465 Iron-containing alcohol dehydrogenase LO004_RS08020 PF14493 Helix-turn-helix domain LO004_RS08020 PF05970 PIF1-like helicase LO004_RS08030 PF02110 Hydroxyethylthiazole kinase family LO004_RS08045 PF01433 Peptidase family M1 domain LO004_RS08045 PF17432 Domain of unknown function (DUF3458_C) ARM repeats LO004_RS08045 PF11940 Domain of unknown function (DUF3458) Ig-like fold LO004_RS08060 PF13953 PapC C-terminal domain LO004_RS08060 PF13954 PapC N-terminal domain LO004_RS08060 PF00577 Outer membrane usher protein LO004_RS08085 PF01817 Chorismate mutase type II LO004_RS08090 PF01037 Lrp/AsnC ligand binding domain LO004_RS08100 PF02224 Cytidylate kinase LO004_RS08115 PF00440 Bacterial regulatory proteins, tetR family LO004_RS08120 PF07715 TonB-dependent Receptor Plug Domain LO004_RS08120 PF00593 TonB dependent receptor LO004_RS08125 PF00924 Mechanosensitive ion channel LO004_RS08155 PF07715 TonB-dependent Receptor Plug Domain LO004_RS08155 PF00593 TonB dependent receptor LO004_RS08180 PF00005 ABC transporter LO004_RS08180 PF12848 ABC transporter LO004_RS08185 PF00582 Universal stress protein family LO004_RS08210 PF00689 Cation transporting ATPase, C-terminus LO004_RS08210 PF00690 Cation transporter/ATPase, N-terminus LO004_RS08215 PF02308 MgtC family LO004_RS08220 PF03594 Benzoate membrane transport protein LO004_RS08225 PF01037 Lrp/AsnC ligand binding domain LO004_RS08230 PF01810 LysE type translocator LO004_RS08235 PF00923 Transaldolase/Fructose-6-phosphate aldolase LO004_RS08240 PF03466 LysR substrate binding domain LO004_RS08240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LO004_RS08250 PF00108 Thiolase, N-terminal domain LO004_RS08250 PF02803 Thiolase, C-terminal domain LO004_RS08260 PF01575 MaoC like domain LO004_RS08265 PF00144 Beta-lactamase LO004_RS08275 PF07690 Major Facilitator Superfamily LO004_RS08290 PF12169 DNA polymerase III subunits gamma and tau domain III LO004_RS08290 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding LO004_RS08290 PF12170 DNA polymerase III tau subunit V interacting with alpha LO004_RS08295 PF05506 Domain of unknown function (DUF756) LO004_RS08295 PF04185 Phosphoesterase family LO004_RS08300 PF03061 Thioesterase superfamily LO004_RS08305 PF00465 Iron-containing alcohol dehydrogenase LO004_RS08315 PF01451 Low molecular weight phosphotyrosine protein phosphatase LO004_RS08320 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LO004_RS08320 PF01565 FAD binding domain LO004_RS08345 PF01645 Conserved region in glutamate synthase LO004_RS08365 PF12832 MFS_1 like family LO004_RS08375 PF02785 Biotin carboxylase C-terminal domain LO004_RS08375 PF00289 Biotin carboxylase, N-terminal domain LO004_RS08375 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LO004_RS08380 PF00364 Biotin-requiring enzyme LO004_RS08385 PF01220 Dehydroquinase class II LO004_RS08390 PF13438 Domain of unknown function (DUF4113) LO004_RS08390 PF00817 impB/mucB/samB family LO004_RS08390 PF11799 impB/mucB/samB family C-terminal domain LO004_RS08400 PF00005 ABC transporter LO004_RS08405 PF00486 Transcriptional regulatory protein, C terminal LO004_RS08405 PF00072 Response regulator receiver domain LO004_RS08415 PF07992 Pyridine nucleotide-disulphide oxidoreductase LO004_RS08415 PF04324 BFD-like [2Fe-2S] binding domain LO004_RS08415 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LO004_RS08415 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LO004_RS08415 PF18267 Rubredoxin NAD+ reductase C-terminal domain LO004_RS08415 PF13806 Rieske-like [2Fe-2S] domain LO004_RS08420 PF07992 Pyridine nucleotide-disulphide oxidoreductase LO004_RS08420 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LO004_RS08420 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LO004_RS08420 PF04324 BFD-like [2Fe-2S] binding domain LO004_RS08420 PF18267 Rubredoxin NAD+ reductase C-terminal domain LO004_RS08425 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LO004_RS08425 PF00384 Molybdopterin oxidoreductase LO004_RS08425 PF01568 Molydopterin dinucleotide binding domain LO004_RS08425 PF04324 BFD-like [2Fe-2S] binding domain LO004_RS08430 PF12804 MobA-like NTP transferase domain LO004_RS08435 PF00384 Molybdopterin oxidoreductase LO004_RS08435 PF01568 Molydopterin dinucleotide binding domain LO004_RS08435 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LO004_RS08440 PF04055 Radical SAM superfamily LO004_RS08440 PF06463 Molybdenum Cofactor Synthesis C LO004_RS08450 PF02391 MoaE protein LO004_RS08455 PF00994 Probable molybdopterin binding domain LO004_RS08455 PF01967 MoaC family LO004_RS08460 PF00994 Probable molybdopterin binding domain LO004_RS08460 PF03453 MoeA N-terminal region (domain I and II) LO004_RS08460 PF03454 MoeA C-terminal region (domain IV) LO004_RS08465 PF01638 HxlR-like helix-turn-helix LO004_RS08470 PF00155 Aminotransferase class I and II LO004_RS08470 PF00392 Bacterial regulatory proteins, gntR family LO004_RS08475 PF00892 EamA-like transporter family LO004_RS08495 PF02635 DsrE/DsrF-like family LO004_RS08500 PF16363 GDP-mannose 4,6 dehydratase LO004_RS08505 PF10415 Fumarase C C-terminus LO004_RS08505 PF00206 Lyase LO004_RS08525 PF01266 FAD dependent oxidoreductase LO004_RS08535 PF02542 YgbB family LO004_RS08545 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LO004_RS08545 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LO004_RS08550 PF00440 Bacterial regulatory proteins, tetR family LO004_RS08555 PF00072 Response regulator receiver domain LO004_RS08555 PF02954 Bacterial regulatory protein, Fis family LO004_RS08555 PF00158 Sigma-54 interaction domain LO004_RS08560 PF00989 PAS fold LO004_RS08560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LO004_RS08560 PF00512 His Kinase A (phospho-acceptor) domain LO004_RS08565 PF04055 Radical SAM superfamily LO004_RS08565 PF18693 TRAM domain LO004_RS08565 PF00919 Uncharacterized protein family UPF0004 LO004_RS08570 PF00696 Amino acid kinase family LO004_RS08575 PF01765 Ribosome recycling factor LO004_RS08580 PF01255 Putative undecaprenyl diphosphate synthase LO004_RS08590 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LO004_RS08590 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LO004_RS08590 PF13288 DXP reductoisomerase C-terminal domain LO004_RS08595 PF13180 PDZ domain LO004_RS08595 PF17820 PDZ domain LO004_RS08595 PF02163 Peptidase family M50 LO004_RS08600 PF07244 Surface antigen variable number repeat LO004_RS08600 PF01103 Surface antigen LO004_RS08610 PF00132 Bacterial transferase hexapeptide (six repeats) LO004_RS08610 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LO004_RS08615 PF07977 FabA-like domain LO004_RS08620 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LO004_RS08620 PF00132 Bacterial transferase hexapeptide (six repeats) LO004_RS08635 PF02631 RecX family LO004_RS08640 PF00154 recA bacterial DNA recombination protein LO004_RS08645 PF01479 S4 domain LO004_RS08650 PF13419 Haloacid dehalogenase-like hydrolase LO004_RS08680 PF00266 Aminotransferase class-V LO004_RS08685 PF00324 Amino acid permease LO004_RS08700 PF00082 Subtilase family LO004_RS08700 PF05922 Peptidase inhibitor I9 LO004_RS08705 PF00916 Sulfate permease family LO004_RS08705 PF01740 STAS domain LO004_RS08710 PF02586 SOS response associated peptidase (SRAP) LO004_RS08715 PF07995 Glucose / Sorbosone dehydrogenase LO004_RS08725 PF00563 EAL domain LO004_RS08725 PF00990 Diguanylate cyclase, GGDEF domain LO004_RS08725 PF03707 Bacterial signalling protein N terminal repeat LO004_RS08745 PF02378 Phosphotransferase system, EIIC LO004_RS08745 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LO004_RS08750 PF00294 pfkB family carbohydrate kinase LO004_RS08755 PF00391 PEP-utilising enzyme, mobile domain LO004_RS08755 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LO004_RS08755 PF05524 PEP-utilising enzyme, N-terminal LO004_RS08755 PF00381 PTS HPr component phosphorylation site LO004_RS08755 PF02896 PEP-utilising enzyme, TIM barrel domain LO004_RS08780 PF05525 Branched-chain amino acid transport protein LO004_RS08785 PF00557 Metallopeptidase family M24 LO004_RS08790 PF03466 LysR substrate binding domain LO004_RS08790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LO004_RS08800 PF00462 Glutaredoxin LO004_RS08805 PF00202 Aminotransferase class-III LO004_RS08810 PF00478 IMP dehydrogenase / GMP reductase domain LO004_RS08810 PF00571 CBS domain LO004_RS08835 PF00448 SRP54-type protein, GTPase domain LO004_RS08835 PF02881 SRP54-type protein, helical bundle domain LO004_RS08845 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) LO004_RS08855 PF08173 Membrane bound YbgT-like protein LO004_RS08860 PF02322 Cytochrome bd terminal oxidase subunit II LO004_RS08865 PF01654 Cytochrome bd terminal oxidase subunit I LO004_RS08875 PF07290 Protein of unknown function (DUF1449) LO004_RS08885 PF00294 pfkB family carbohydrate kinase LO004_RS08890 PF07715 TonB-dependent Receptor Plug Domain LO004_RS08890 PF00593 TonB dependent receptor LO004_RS08895 PF05193 Peptidase M16 inactive domain LO004_RS08895 PF00675 Insulinase (Peptidase family M16) LO004_RS08895 PF08367 Peptidase M16C associated LO004_RS08900 PF02253 Phospholipase A1 LO004_RS08905 PF02386 Cation transport protein LO004_RS08910 PF02080 TrkA-C domain LO004_RS08910 PF02254 TrkA-N domain LO004_RS08915 PF00291 Pyridoxal-phosphate dependent enzyme LO004_RS08915 PF00585 C-terminal regulatory domain of Threonine dehydratase LO004_RS08920 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LO004_RS08935 PF01118 Semialdehyde dehydrogenase, NAD binding domain LO004_RS08935 PF02774 Semialdehyde dehydrogenase, dimerisation domain LO004_RS08945 PF02617 ATP-dependent Clp protease adaptor protein ClpS LO004_RS08950 PF00004 ATPase family associated with various cellular activities (AAA) LO004_RS08950 PF17871 AAA lid domain LO004_RS08950 PF02861 Clp amino terminal domain, pathogenicity island component LO004_RS08950 PF10431 C-terminal, D2-small domain, of ClpB protein LO004_RS08950 PF07724 AAA domain (Cdc48 subfamily) LO004_RS08955 PF02694 Uncharacterised BCR, YnfA/UPF0060 family LO004_RS08960 PF00793 DAHP synthetase I family LO004_RS08975 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LO004_RS08975 PF07992 Pyridine nucleotide-disulphide oxidoreductase LO004_RS09005 PF06418 CTP synthase N-terminus LO004_RS09005 PF00117 Glutamine amidotransferase class-I LO004_RS09010 PF00793 DAHP synthetase I family LO004_RS09015 PF00113 Enolase, C-terminal TIM barrel domain LO004_RS09015 PF03952 Enolase, N-terminal domain LO004_RS09020 PF04239 Protein of unknown function (DUF421) LO004_RS09025 PF04977 Septum formation initiator LO004_RS09030 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LO004_RS09035 PF01144 Coenzyme A transferase LO004_RS09040 PF01144 Coenzyme A transferase LO004_RS09045 PF02803 Thiolase, C-terminal domain LO004_RS09045 PF00108 Thiolase, N-terminal domain LO004_RS09050 PF10397 Adenylosuccinate lyase C-terminus LO004_RS09050 PF00206 Lyase LO004_RS09055 PF00561 alpha/beta hydrolase fold LO004_RS09060 PF07690 Major Facilitator Superfamily LO004_RS09065 PF02627 Carboxymuconolactone decarboxylase family LO004_RS09070 PF00775 Dioxygenase LO004_RS09070 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal LO004_RS09075 PF00775 Dioxygenase LO004_RS09080 PF01487 Type I 3-dehydroquinase LO004_RS09085 PF05048 Periplasmic copper-binding protein (NosD) LO004_RS09090 PF04966 Carbohydrate-selective porin, OprB family LO004_RS09095 PF01011 PQQ enzyme repeat LO004_RS09095 PF13360 PQQ-like domain LO004_RS09105 PF04143 Sulphur transport LO004_RS09115 PF00753 Metallo-beta-lactamase superfamily LO004_RS09120 PF09339 IclR helix-turn-helix domain LO004_RS09120 PF01614 Bacterial transcriptional regulator LO004_RS09125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LO004_RS09125 PF03466 LysR substrate binding domain LO004_RS09130 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LO004_RS09130 PF02770 Acyl-CoA dehydrogenase, middle domain LO004_RS09130 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LO004_RS09145 PF00106 short chain dehydrogenase LO004_RS09155 PF07690 Major Facilitator Superfamily LO004_RS09165 PF01425 Amidase LO004_RS09170 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LO004_RS09185 PF00355 Rieske [2Fe-2S] domain LO004_RS09185 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LO004_RS09200 PF00111 2Fe-2S iron-sulfur cluster binding domain LO004_RS09200 PF00175 Oxidoreductase NAD-binding domain LO004_RS09205 PF01613 Flavin reductase like domain LO004_RS09210 PF02311 AraC-like ligand binding domain LO004_RS09210 PF12833 Helix-turn-helix domain LO004_RS09215 PF02727 Copper amine oxidase, N2 domain LO004_RS09215 PF07833 Copper amine oxidase N-terminal domain LO004_RS09215 PF02728 Copper amine oxidase, N3 domain LO004_RS09215 PF01179 Copper amine oxidase, enzyme domain LO004_RS09225 PF00171 Aldehyde dehydrogenase family LO004_RS09230 PF01804 Penicillin amidase LO004_RS09235 PF12146 Serine aminopeptidase, S33 LO004_RS09240 PF00108 Thiolase, N-terminal domain LO004_RS09240 PF02803 Thiolase, C-terminal domain LO004_RS09245 PF01144 Coenzyme A transferase LO004_RS09250 PF01144 Coenzyme A transferase LO004_RS09255 PF00775 Dioxygenase LO004_RS09255 PF04444 Catechol dioxygenase N terminus LO004_RS09260 PF02426 Muconolactone delta-isomerase LO004_RS09265 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LO004_RS09265 PF13378 Enolase C-terminal domain-like LO004_RS09270 PF03466 LysR substrate binding domain LO004_RS09270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LO004_RS09280 PF07729 FCD domain LO004_RS09280 PF00392 Bacterial regulatory proteins, gntR family LO004_RS09285 PF00920 Dehydratase family LO004_RS09290 PF07690 Major Facilitator Superfamily LO004_RS09300 PF00171 Aldehyde dehydrogenase family LO004_RS09310 PF00561 alpha/beta hydrolase fold LO004_RS09315 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LO004_RS09315 PF07992 Pyridine nucleotide-disulphide oxidoreductase LO004_RS09320 PF00106 short chain dehydrogenase LO004_RS09330 PF13411 MerR HTH family regulatory protein LO004_RS09340 PF07992 Pyridine nucleotide-disulphide oxidoreductase LO004_RS09350 PF12706 Beta-lactamase superfamily domain LO004_RS09355 PF08359 YsiA-like protein, C-terminal region LO004_RS09355 PF00440 Bacterial regulatory proteins, tetR family LO004_RS09360 PF03466 LysR substrate binding domain LO004_RS09360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LO004_RS09375 PF00106 short chain dehydrogenase LO004_RS09380 PF01575 MaoC like domain LO004_RS09385 PF02770 Acyl-CoA dehydrogenase, middle domain LO004_RS09385 PF12806 Acetyl-CoA dehydrogenase C-terminal like LO004_RS09385 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LO004_RS09385 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LO004_RS09395 PF00501 AMP-binding enzyme LO004_RS09395 PF13193 AMP-binding enzyme C-terminal domain LO004_RS09425 PF07690 Major Facilitator Superfamily LO004_RS09430 PF04909 Amidohydrolase LO004_RS09440 PF00392 Bacterial regulatory proteins, gntR family LO004_RS09440 PF07702 UTRA domain LO004_RS09445 PF08450 SMP-30/Gluconolactonase/LRE-like region LO004_RS09455 PF03466 LysR substrate binding domain LO004_RS09455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LO004_RS09480 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LO004_RS09480 PF00529 HlyD membrane-fusion protein of T1SS LO004_RS09495 PF00171 Aldehyde dehydrogenase family LO004_RS09500 PF00920 Dehydratase family LO004_RS09510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LO004_RS09510 PF03466 LysR substrate binding domain LO004_RS09515 PF01370 NAD dependent epimerase/dehydratase family LO004_RS09520 PF07690 Major Facilitator Superfamily LO004_RS09525 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LO004_RS09525 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LO004_RS09530 PF12833 Helix-turn-helix domain LO004_RS09530 PF06719 AraC-type transcriptional regulator N-terminus LO004_RS09535 PF08240 Alcohol dehydrogenase GroES-like domain LO004_RS09535 PF00107 Zinc-binding dehydrogenase LO004_RS09545 PF01032 FecCD transport family LO004_RS09550 PF00005 ABC transporter LO004_RS09570 PF14572 Phosphoribosyl synthetase-associated domain LO004_RS09570 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LO004_RS09575 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LO004_RS09595 PF13533 Biotin-lipoyl like LO004_RS09600 PF07690 Major Facilitator Superfamily LO004_RS09625 PF01975 Survival protein SurE LO004_RS09635 PF13291 ACT domain LO004_RS09635 PF02824 TGS domain LO004_RS09635 PF04607 Region found in RelA / SpoT proteins LO004_RS09670 PF01734 Patatin-like phospholipase LO004_RS09675 PF13673 Acetyltransferase (GNAT) domain LO004_RS09700 PF12146 Serine aminopeptidase, S33 LO004_RS09705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LO004_RS09705 PF03466 LysR substrate binding domain LO004_RS09720 PF12146 Serine aminopeptidase, S33 LO004_RS09725 PF02311 AraC-like ligand binding domain LO004_RS09725 PF12833 Helix-turn-helix domain LO004_RS09735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LO004_RS09735 PF00512 His Kinase A (phospho-acceptor) domain LO004_RS09735 PF00672 HAMP domain LO004_RS09735 PF18698 Histidine kinase sensor domain LO004_RS09740 PF00072 Response regulator receiver domain LO004_RS09740 PF00486 Transcriptional regulatory protein, C terminal LO004_RS09745 PF00529 HlyD membrane-fusion protein of T1SS LO004_RS09745 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LO004_RS09750 PF00873 AcrB/AcrD/AcrF family LO004_RS09755 PF02321 Outer membrane efflux protein LO004_RS09760 PF12146 Serine aminopeptidase, S33 LO004_RS09765 PF00743 Flavin-binding monooxygenase-like LO004_RS09770 PF01593 Flavin containing amine oxidoreductase LO004_RS09785 PF01266 FAD dependent oxidoreductase LO004_RS09875 PF16970 Type-1 fimbrial protein, A LO004_RS09880 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LO004_RS09880 PF02753 Pili assembly chaperone PapD, C-terminal domain LO004_RS09885 PF00577 Outer membrane usher protein LO004_RS09885 PF13953 PapC C-terminal domain LO004_RS09885 PF13954 PapC N-terminal domain LO004_RS09900 PF08240 Alcohol dehydrogenase GroES-like domain LO004_RS09900 PF00107 Zinc-binding dehydrogenase LO004_RS09910 PF00199 Catalase LO004_RS09925 PF13091 PLD-like domain LO004_RS09940 PF01244 Membrane dipeptidase (Peptidase family M19) LO004_RS09945 PF13186 Iron-sulfur cluster-binding domain LO004_RS09945 PF04055 Radical SAM superfamily LO004_RS09950 PF05402 Coenzyme PQQ synthesis protein D (PqqD) LO004_RS09955 PF03070 TENA/THI-4/PQQC family LO004_RS09960 PF12706 Beta-lactamase superfamily domain LO004_RS09965 PF08042 PqqA family LO004_RS09970 PF02503 Polyphosphate kinase middle domain LO004_RS09970 PF13090 Polyphosphate kinase C-terminal domain 2 LO004_RS09970 PF17941 Polyphosphate kinase C-terminal domain 1 LO004_RS09970 PF13089 Polyphosphate kinase N-terminal domain LO004_RS09975 PF00149 Calcineurin-like phosphoesterase LO004_RS09985 PF00550 Phosphopantetheine attachment site LO004_RS09985 PF00857 Isochorismatase family LO004_RS09990 PF00106 short chain dehydrogenase LO004_RS09995 PF00005 ABC transporter LO004_RS09995 PF03459 TOBE domain LO004_RS10000 PF00528 Binding-protein-dependent transport system inner membrane component LO004_RS10010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LO004_RS10010 PF03459 TOBE domain LO004_RS10015 PF00355 Rieske [2Fe-2S] domain LO004_RS10015 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LO004_RS10020 PF00866 Ring hydroxylating beta subunit LO004_RS10025 PF00970 Oxidoreductase FAD-binding domain LO004_RS10025 PF00111 2Fe-2S iron-sulfur cluster binding domain LO004_RS10025 PF00175 Oxidoreductase NAD-binding domain LO004_RS10030 PF14525 AraC-binding-like domain LO004_RS10030 PF12833 Helix-turn-helix domain LO004_RS10040 PF01613 Flavin reductase like domain LO004_RS10055 PF01738 Dienelactone hydrolase family LO004_RS10060 PF07690 Major Facilitator Superfamily LO004_RS10065 PF12833 Helix-turn-helix domain LO004_RS10065 PF06719 AraC-type transcriptional regulator N-terminus LO004_RS10105 PF03466 LysR substrate binding domain LO004_RS10105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LO004_RS10110 PF01144 Coenzyme A transferase LO004_RS10115 PF01144 Coenzyme A transferase LO004_RS10120 PF02667 Short chain fatty acid transporter LO004_RS10125 PF00108 Thiolase, N-terminal domain LO004_RS10125 PF02803 Thiolase, C-terminal domain LO004_RS10130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LO004_RS10130 PF03466 LysR substrate binding domain LO004_RS10135 PF03466 LysR substrate binding domain LO004_RS10135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LO004_RS10150 PF10415 Fumarase C C-terminus LO004_RS10150 PF00206 Lyase LO004_RS10155 PF07715 TonB-dependent Receptor Plug Domain LO004_RS10155 PF00593 TonB dependent receptor LO004_RS10160 PF00083 Sugar (and other) transporter LO004_RS10175 PF00005 ABC transporter LO004_RS10180 PF00528 Binding-protein-dependent transport system inner membrane component LO004_RS10185 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LO004_RS10200 PF00392 Bacterial regulatory proteins, gntR family LO004_RS10200 PF07702 UTRA domain LO004_RS10210 PF02525 Flavodoxin-like fold LO004_RS10215 PF01638 HxlR-like helix-turn-helix LO004_RS10220 PF06445 GyrI-like small molecule binding domain LO004_RS10220 PF12833 Helix-turn-helix domain LO004_RS10235 PF01925 Sulfite exporter TauE/SafE LO004_RS10250 PF00753 Metallo-beta-lactamase superfamily LO004_RS10255 PF02954 Bacterial regulatory protein, Fis family LO004_RS10255 PF00072 Response regulator receiver domain LO004_RS10255 PF00158 Sigma-54 interaction domain LO004_RS10260 PF01062 Bestrophin, RFP-TM, chloride channel LO004_RS10265 PF08240 Alcohol dehydrogenase GroES-like domain LO004_RS10265 PF00107 Zinc-binding dehydrogenase LO004_RS10270 PF00106 short chain dehydrogenase LO004_RS10275 PF07992 Pyridine nucleotide-disulphide oxidoreductase LO004_RS10275 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LO004_RS10280 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LO004_RS10280 PF00364 Biotin-requiring enzyme LO004_RS10280 PF02817 e3 binding domain LO004_RS10285 PF02780 Transketolase, C-terminal domain LO004_RS10285 PF02779 Transketolase, pyrimidine binding domain LO004_RS10290 PF00676 Dehydrogenase E1 component LO004_RS10295 PF04055 Radical SAM superfamily LO004_RS10310 PF00990 Diguanylate cyclase, GGDEF domain LO004_RS10310 PF08448 PAS fold LO004_RS10315 PF01264 Chorismate synthase LO004_RS10320 PF05175 Methyltransferase small domain LO004_RS10325 PF00291 Pyridoxal-phosphate dependent enzyme LO004_RS10335 PF17862 AAA+ lid domain LO004_RS10335 PF01434 Peptidase family M41 LO004_RS10335 PF00004 ATPase family associated with various cellular activities (AAA) LO004_RS10345 PF05166 YcgL domain LO004_RS10370 PF02132 RecR protein LO004_RS10370 PF13662 Toprim domain LO004_RS10375 PF02575 YbaB/EbfC DNA-binding family LO004_RS10385 PF01053 Cys/Met metabolism PLP-dependent enzyme LO004_RS10390 PF00561 alpha/beta hydrolase fold LO004_RS10395 PF08241 Methyltransferase domain LO004_RS10425 PF01230 HIT domain LO004_RS10460 PF00005 ABC transporter LO004_RS10465 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LO004_RS10475 PF02684 Lipid-A-disaccharide synthetase LO004_RS10480 PF00593 TonB dependent receptor LO004_RS10480 PF07715 TonB-dependent Receptor Plug Domain LO004_RS10500 PF01925 Sulfite exporter TauE/SafE LO004_RS10505 PF00793 DAHP synthetase I family LO004_RS10510 PF02654 Cobalamin-5-phosphate synthase LO004_RS10520 PF00300 Histidine phosphatase superfamily (branch 1) LO004_RS10525 PF02277 Phosphoribosyltransferase LO004_RS10530 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase LO004_RS10540 PF13419 Haloacid dehalogenase-like hydrolase LO004_RS10565 PF00593 TonB dependent receptor LO004_RS10565 PF07715 TonB-dependent Receptor Plug Domain LO004_RS10570 PF03737 Aldolase/RraA LO004_RS10580 PF06276 Ferric iron reductase FhuF-like transporter LO004_RS10580 PF04183 IucA / IucC family LO004_RS10585 PF06276 Ferric iron reductase FhuF-like transporter LO004_RS10585 PF04183 IucA / IucC family LO004_RS10590 PF07690 Major Facilitator Superfamily LO004_RS10595 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) LO004_RS10600 PF04183 IucA / IucC family LO004_RS10600 PF06276 Ferric iron reductase FhuF-like transporter LO004_RS10605 PF04073 Aminoacyl-tRNA editing domain LO004_RS10615 PF03109 ABC1 family LO004_RS10620 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LO004_RS10620 PF02770 Acyl-CoA dehydrogenase, middle domain LO004_RS10620 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LO004_RS10625 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LO004_RS10625 PF02770 Acyl-CoA dehydrogenase, middle domain LO004_RS10625 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LO004_RS10630 PF00487 Fatty acid desaturase LO004_RS10635 PF12833 Helix-turn-helix domain LO004_RS10635 PF12852 Cupin LO004_RS10640 PF00639 PPIC-type PPIASE domain LO004_RS10640 PF09312 SurA N-terminal domain LO004_RS10645 PF00216 Bacterial DNA-binding protein LO004_RS10660 PF02082 Transcriptional regulator LO004_RS10665 PF00266 Aminotransferase class-V LO004_RS10670 PF01592 NifU-like N terminal domain LO004_RS10675 PF01521 Iron-sulphur cluster biosynthesis LO004_RS10680 PF07743 HSCB C-terminal oligomerisation domain LO004_RS10680 PF00226 DnaJ domain LO004_RS10685 PF00012 Hsp70 protein LO004_RS10690 PF00111 2Fe-2S iron-sulfur cluster binding domain LO004_RS10695 PF00211 Adenylate and Guanylate cyclase catalytic domain LO004_RS10705 PF00270 DEAD/DEAH box helicase LO004_RS10705 PF02559 CarD-like/TRCF domain LO004_RS10705 PF17757 UvrB interaction domain LO004_RS10705 PF00271 Helicase conserved C-terminal domain LO004_RS10705 PF03461 TRCF domain LO004_RS10725 PF03737 Aldolase/RraA LO004_RS10730 PF13460 NAD(P)H-binding LO004_RS10735 PF01649 Ribosomal protein S20 LO004_RS10745 PF00459 Inositol monophosphatase family LO004_RS10760 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LO004_RS10760 PF00005 ABC transporter LO004_RS10765 PF00528 Binding-protein-dependent transport system inner membrane component LO004_RS10770 PF00528 Binding-protein-dependent transport system inner membrane component LO004_RS10775 PF01432 Peptidase family M3 LO004_RS10785 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LO004_RS10790 PF07715 TonB-dependent Receptor Plug Domain LO004_RS10790 PF00593 TonB dependent receptor LO004_RS10800 PF01618 MotA/TolQ/ExbB proton channel family LO004_RS10805 PF02472 Biopolymer transport protein ExbD/TolR LO004_RS10810 PF02472 Biopolymer transport protein ExbD/TolR LO004_RS10820 PF01274 Malate synthase LO004_RS10885 PF01551 Peptidase family M23 LO004_RS10885 PF10145 Phage-related minor tail protein LO004_RS10885 PF01464 Transglycosylase SLT domain LO004_RS11035 PF03796 DnaB-like helicase C terminal domain LO004_RS11035 PF00772 DnaB-like helicase N terminal domain LO004_RS11050 PF00717 Peptidase S24-like LO004_RS11050 PF01726 LexA DNA binding domain LO004_RS11090 PF02899 Phage integrase, N-terminal SAM-like domain LO004_RS11090 PF00589 Phage integrase family LO004_RS11095 PF03969 AFG1-like ATPase LO004_RS11105 PF00743 Flavin-binding monooxygenase-like LO004_RS11115 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LO004_RS11125 PF00216 Bacterial DNA-binding protein LO004_RS11130 PF00575 S1 RNA binding domain LO004_RS11135 PF02224 Cytidylate kinase LO004_RS11145 PF14437 MafB19-like deaminase LO004_RS11155 PF03167 Uracil DNA glycosylase superfamily LO004_RS11165 PF03934 Type II secretion system (T2SS), protein K LO004_RS11170 PF07963 Prokaryotic N-terminal methylation motif LO004_RS11170 PF11612 Type II secretion system (T2SS), protein J LO004_RS11175 PF07963 Prokaryotic N-terminal methylation motif LO004_RS11175 PF02501 Type II secretion system (T2SS), protein I LO004_RS11190 PF01026 TatD related DNase LO004_RS11200 PF09115 DNA polymerase III, delta subunit, C terminal LO004_RS11205 PF02348 Cytidylyltransferase LO004_RS11210 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LO004_RS11215 PF00664 ABC transporter transmembrane region LO004_RS11215 PF00005 ABC transporter LO004_RS11225 PF01618 MotA/TolQ/ExbB proton channel family LO004_RS11230 PF17762 HTH domain found in ParB protein LO004_RS11230 PF02195 ParB-like nuclease domain LO004_RS11235 PF13614 AAA domain LO004_RS11240 PF02527 rRNA small subunit methyltransferase G LO004_RS11245 PF00483 Nucleotidyl transferase LO004_RS11250 PF01636 Phosphotransferase enzyme family LO004_RS11255 PF04453 LPS transport system D LO004_RS11255 PF03968 OstA-like protein LO004_RS11260 PF09312 SurA N-terminal domain LO004_RS11260 PF00639 PPIC-type PPIASE domain LO004_RS11265 PF01116 Fructose-bisphosphate aldolase class-II LO004_RS11275 PF00162 Phosphoglycerate kinase LO004_RS11285 PF02545 Maf-like protein LO004_RS11290 PF08007 Cupin superfamily protein LO004_RS11305 PF00375 Sodium:dicarboxylate symporter family LO004_RS11310 PF06912 Protein of unknown function (DUF1275) LO004_RS11315 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) LO004_RS11320 PF00005 ABC transporter LO004_RS11320 PF00664 ABC transporter transmembrane region LO004_RS11330 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LO004_RS11330 PF12833 Helix-turn-helix domain LO004_RS11335 PF01597 Glycine cleavage H-protein LO004_RS11340 PF02146 Sir2 family LO004_RS11345 PF00474 Sodium:solute symporter family LO004_RS11350 PF01037 Lrp/AsnC ligand binding domain LO004_RS11355 PF00171 Aldehyde dehydrogenase family LO004_RS11355 PF01619 Proline dehydrogenase LO004_RS11355 PF14850 DNA-binding domain of Proline dehydrogenase LO004_RS11355 PF18327 Proline utilization A proline dehydrogenase N-terminal domain LO004_RS11360 PF04229 GrpB protein LO004_RS11365 PF05958 tRNA (Uracil-5-)-methyltransferase LO004_RS11375 PF09992 Phosphodiester glycosidase LO004_RS11385 PF04264 YceI-like domain LO004_RS11395 PF02779 Transketolase, pyrimidine binding domain LO004_RS11395 PF00456 Transketolase, thiamine diphosphate binding domain LO004_RS11395 PF02780 Transketolase, C-terminal domain LO004_RS11400 PF00438 S-adenosylmethionine synthetase, N-terminal domain LO004_RS11400 PF02773 S-adenosylmethionine synthetase, C-terminal domain LO004_RS11400 PF02772 S-adenosylmethionine synthetase, central domain LO004_RS11420 PF00905 Penicillin binding protein transpeptidase domain LO004_RS11435 PF02075 Crossover junction endodeoxyribonuclease RuvC LO004_RS11440 PF01256 Carbohydrate kinase LO004_RS11440 PF03853 YjeF-related protein N-terminus LO004_RS11445 PF08331 Domain of unknown function (DUF1730) LO004_RS11450 PF04055 Radical SAM superfamily LO004_RS11450 PF06968 Biotin and Thiamin Synthesis associated domain LO004_RS11465 PF16970 Type-1 fimbrial protein, A LO004_RS11470 PF02753 Pili assembly chaperone PapD, C-terminal domain LO004_RS11470 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LO004_RS11475 PF13954 PapC N-terminal domain LO004_RS11475 PF13953 PapC C-terminal domain LO004_RS11475 PF00577 Outer membrane usher protein LO004_RS11495 PF00892 EamA-like transporter family LO004_RS11505 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LO004_RS11515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LO004_RS11515 PF03466 LysR substrate binding domain LO004_RS11535 PF00440 Bacterial regulatory proteins, tetR family LO004_RS11545 PF01709 Transcriptional regulator LO004_RS11550 PF01037 Lrp/AsnC ligand binding domain LO004_RS11560 PF00005 ABC transporter LO004_RS11565 PF00528 Binding-protein-dependent transport system inner membrane component LO004_RS11570 PF00528 Binding-protein-dependent transport system inner membrane component LO004_RS11585 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LO004_RS11585 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LO004_RS11595 PF00296 Luciferase-like monooxygenase LO004_RS11600 PF03180 NLPA lipoprotein LO004_RS11605 PF03180 NLPA lipoprotein LO004_RS11610 PF00005 ABC transporter LO004_RS11610 PF09383 NIL domain LO004_RS11615 PF00528 Binding-protein-dependent transport system inner membrane component LO004_RS11620 PF01926 50S ribosome-binding GTPase LO004_RS11620 PF06071 Protein of unknown function (DUF933) LO004_RS11645 PF03591 AzlC protein LO004_RS11650 PF05437 Branched-chain amino acid transport protein (AzlD) LO004_RS11660 PF02222 ATP-grasp domain LO004_RS11665 PF01966 HD domain LO004_RS11665 PF08335 GlnD PII-uridylyltransferase LO004_RS11665 PF01909 Nucleotidyltransferase domain LO004_RS11670 PF00155 Aminotransferase class I and II LO004_RS11680 PF12852 Cupin LO004_RS11680 PF12833 Helix-turn-helix domain LO004_RS11685 PF00255 Glutathione peroxidase LO004_RS11690 PF01641 SelR domain LO004_RS11695 PF00155 Aminotransferase class I and II LO004_RS11700 PF00375 Sodium:dicarboxylate symporter family LO004_RS11705 PF00710 Asparaginase, N-terminal LO004_RS11705 PF17763 Glutaminase/Asparaginase C-terminal domain LO004_RS11710 PF02811 PHP domain LO004_RS11710 PF01336 OB-fold nucleic acid binding domain LO004_RS11710 PF14579 Helix-hairpin-helix motif LO004_RS11710 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LO004_RS11710 PF07733 Bacterial DNA polymerase III alpha NTPase domain LO004_RS11715 PF00588 SpoU rRNA Methylase family LO004_RS11720 PF00132 Bacterial transferase hexapeptide (six repeats) LO004_RS11735 PF07992 Pyridine nucleotide-disulphide oxidoreductase LO004_RS11735 PF13192 Thioredoxin domain LO004_RS11750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LO004_RS11750 PF03466 LysR substrate binding domain LO004_RS11755 PF01758 Sodium Bile acid symporter family LO004_RS11760 PF01022 Bacterial regulatory protein, arsR family LO004_RS11765 PF03960 ArsC family LO004_RS11775 PF13382 Adenine deaminase C-terminal domain LO004_RS11775 PF01979 Amidohydrolase family LO004_RS11785 PF03466 LysR substrate binding domain LO004_RS11785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LO004_RS11795 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LO004_RS11800 PF01177 Asp/Glu/Hydantoin racemase LO004_RS11805 PF02668 Taurine catabolism dioxygenase TauD, TfdA family LO004_RS11810 PF00528 Binding-protein-dependent transport system inner membrane component LO004_RS11815 PF00005 ABC transporter LO004_RS11820 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LO004_RS11830 PF00083 Sugar (and other) transporter LO004_RS11835 PF00296 Luciferase-like monooxygenase LO004_RS11840 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LO004_RS11840 PF02770 Acyl-CoA dehydrogenase, middle domain LO004_RS11840 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LO004_RS11850 PF01654 Cytochrome bd terminal oxidase subunit I LO004_RS11855 PF02322 Cytochrome bd terminal oxidase subunit II LO004_RS11865 PF00155 Aminotransferase class I and II LO004_RS11865 PF00392 Bacterial regulatory proteins, gntR family LO004_RS11870 PF03466 LysR substrate binding domain LO004_RS11870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LO004_RS11885 PF00698 Acyl transferase domain LO004_RS11890 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG LO004_RS11900 PF01039 Carboxyl transferase domain LO004_RS11905 PF06857 Malonate decarboxylase delta subunit (MdcD) LO004_RS11910 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase LO004_RS11915 PF16957 Malonate decarboxylase, alpha subunit, transporter LO004_RS11920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LO004_RS11920 PF03466 LysR substrate binding domain LO004_RS11930 PF07690 Major Facilitator Superfamily LO004_RS11945 PF00155 Aminotransferase class I and II LO004_RS11945 PF00392 Bacterial regulatory proteins, gntR family LO004_RS11950 PF04172 LrgB-like family LO004_RS11955 PF03788 LrgA family LO004_RS11960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LO004_RS11960 PF03466 LysR substrate binding domain LO004_RS11965 PF14834 Glutathione S-transferase, C-terminal domain LO004_RS11965 PF02798 Glutathione S-transferase, N-terminal domain LO004_RS11970 PF02798 Glutathione S-transferase, N-terminal domain LO004_RS11975 PF03466 LysR substrate binding domain LO004_RS11975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LO004_RS11985 PF00581 Rhodanese-like domain LO004_RS11990 PF00132 Bacterial transferase hexapeptide (six repeats) LO004_RS12000 PF00266 Aminotransferase class-V LO004_RS12005 PF01810 LysE type translocator LO004_RS12010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LO004_RS12010 PF03466 LysR substrate binding domain LO004_RS12015 PF00497 Bacterial extracellular solute-binding proteins, family 3 LO004_RS12020 PF00497 Bacterial extracellular solute-binding proteins, family 3 LO004_RS12025 PF00005 ABC transporter LO004_RS12030 PF00528 Binding-protein-dependent transport system inner membrane component LO004_RS12035 PF00528 Binding-protein-dependent transport system inner membrane component LO004_RS12050 PF00072 Response regulator receiver domain LO004_RS12055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LO004_RS12055 PF00512 His Kinase A (phospho-acceptor) domain LO004_RS12055 PF09308 LuxQ, periplasmic LO004_RS12055 PF00072 Response regulator receiver domain LO004_RS12065 PF01037 Lrp/AsnC ligand binding domain LO004_RS12065 PF13404 AsnC-type helix-turn-helix domain LO004_RS12075 PF00717 Peptidase S24-like LO004_RS12100 PF00199 Catalase LO004_RS12100 PF06628 Catalase-related immune-responsive LO004_RS12100 PF18011 C-terminal domain found in long catalases LO004_RS12110 PF00994 Probable molybdopterin binding domain LO004_RS12110 PF02464 Competence-damaged protein LO004_RS12110 PF18146 Damage-inducible protein CinA KH domain LO004_RS12145 PF03466 LysR substrate binding domain LO004_RS12145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LO004_RS12165 PF00501 AMP-binding enzyme LO004_RS12165 PF13193 AMP-binding enzyme C-terminal domain LO004_RS12170 PF00440 Bacterial regulatory proteins, tetR family LO004_RS12175 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LO004_RS12175 PF02770 Acyl-CoA dehydrogenase, middle domain LO004_RS12175 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LO004_RS12180 PF01039 Carboxyl transferase domain LO004_RS12185 PF00378 Enoyl-CoA hydratase/isomerase LO004_RS12190 PF02785 Biotin carboxylase C-terminal domain LO004_RS12190 PF00289 Biotin carboxylase, N-terminal domain LO004_RS12190 PF00364 Biotin-requiring enzyme LO004_RS12190 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LO004_RS12190 PF18140 Propionyl-coenzyme A carboxylase BT domain LO004_RS12195 PF00682 HMGL-like LO004_RS12200 PF03466 LysR substrate binding domain LO004_RS12200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LO004_RS12215 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LO004_RS12215 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LO004_RS12215 PF12806 Acetyl-CoA dehydrogenase C-terminal like LO004_RS12215 PF02770 Acyl-CoA dehydrogenase, middle domain LO004_RS12225 PF07690 Major Facilitator Superfamily LO004_RS12235 PF01144 Coenzyme A transferase LO004_RS12240 PF01144 Coenzyme A transferase LO004_RS12245 PF07690 Major Facilitator Superfamily LO004_RS12250 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LO004_RS12250 PF02770 Acyl-CoA dehydrogenase, middle domain LO004_RS12250 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LO004_RS12255 PF00378 Enoyl-CoA hydratase/isomerase LO004_RS12265 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain LO004_RS12265 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LO004_RS12265 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LO004_RS12270 PF02803 Thiolase, C-terminal domain LO004_RS12270 PF00108 Thiolase, N-terminal domain LO004_RS12275 PF09339 IclR helix-turn-helix domain LO004_RS12285 PF01810 LysE type translocator LO004_RS12290 PF16861 Carbamoyltransferase C-terminus LO004_RS12290 PF02543 Carbamoyltransferase N-terminus LO004_RS12300 PF03060 Nitronate monooxygenase LO004_RS12305 PF00378 Enoyl-CoA hydratase/isomerase LO004_RS12310 PF09339 IclR helix-turn-helix domain LO004_RS12315 PF02515 CoA-transferase family III LO004_RS12320 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LO004_RS12320 PF02770 Acyl-CoA dehydrogenase, middle domain LO004_RS12320 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LO004_RS12325 PF07690 Major Facilitator Superfamily LO004_RS12330 PF13419 Haloacid dehalogenase-like hydrolase LO004_RS12335 PF00266 Aminotransferase class-V LO004_RS12340 PF01266 FAD dependent oxidoreductase LO004_RS12345 PF00528 Binding-protein-dependent transport system inner membrane component LO004_RS12350 PF00005 ABC transporter LO004_RS12350 PF08402 TOBE domain LO004_RS12360 PF00392 Bacterial regulatory proteins, gntR family LO004_RS12360 PF07702 UTRA domain LO004_RS12365 PF01494 FAD binding domain LO004_RS12370 PF09339 IclR helix-turn-helix domain LO004_RS12370 PF01614 Bacterial transcriptional regulator LO004_RS12375 PF02525 Flavodoxin-like fold LO004_RS12380 PF03466 LysR substrate binding domain LO004_RS12380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LO004_RS12385 PF02627 Carboxymuconolactone decarboxylase family LO004_RS12390 PF00171 Aldehyde dehydrogenase family LO004_RS12400 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LO004_RS12410 PF00171 Aldehyde dehydrogenase family LO004_RS12415 PF00296 Luciferase-like monooxygenase LO004_RS12420 PF01613 Flavin reductase like domain LO004_RS12425 PF12697 Alpha/beta hydrolase family LO004_RS12445 PF01292 Prokaryotic cytochrome b561 LO004_RS12450 PF00199 Catalase LO004_RS12465 PF00580 UvrD/REP helicase N-terminal domain LO004_RS12465 PF13361 UvrD-like helicase C-terminal domain LO004_RS12470 PF02463 RecF/RecN/SMC N terminal domain LO004_RS12475 PF03061 Thioesterase superfamily LO004_RS12480 PF00132 Bacterial transferase hexapeptide (six repeats) LO004_RS12485 PF07848 PaaX-like protein LO004_RS12485 PF08223 PaaX-like protein C-terminal domain LO004_RS12490 PF00501 AMP-binding enzyme LO004_RS12490 PF14535 AMP-binding enzyme C-terminal domain LO004_RS12495 PF00108 Thiolase, N-terminal domain LO004_RS12495 PF02803 Thiolase, C-terminal domain LO004_RS12500 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain LO004_RS12500 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LO004_RS12500 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LO004_RS12505 PF00378 Enoyl-CoA hydratase/isomerase LO004_RS12510 PF00378 Enoyl-CoA hydratase/isomerase LO004_RS12515 PF00175 Oxidoreductase NAD-binding domain LO004_RS12515 PF00111 2Fe-2S iron-sulfur cluster binding domain LO004_RS12515 PF00970 Oxidoreductase FAD-binding domain LO004_RS12520 PF01883 Iron-sulfur cluster assembly protein LO004_RS12525 PF05138 Phenylacetic acid catabolic protein LO004_RS12535 PF05138 Phenylacetic acid catabolic protein LO004_RS12540 PF01575 MaoC like domain LO004_RS12540 PF00171 Aldehyde dehydrogenase family LO004_RS12545 PF03315 Serine dehydratase beta chain LO004_RS12545 PF03313 Serine dehydratase alpha chain LO004_RS12550 PF13520 Amino acid permease LO004_RS12555 PF00171 Aldehyde dehydrogenase family LO004_RS12560 PF00083 Sugar (and other) transporter LO004_RS12570 PF04324 BFD-like [2Fe-2S] binding domain LO004_RS12570 PF07992 Pyridine nucleotide-disulphide oxidoreductase LO004_RS12580 PF01266 FAD dependent oxidoreductase LO004_RS12585 PF05544 Proline racemase LO004_RS12590 PF00392 Bacterial regulatory proteins, gntR family LO004_RS12600 PF00701 Dihydrodipicolinate synthetase family LO004_RS12610 PF09278 MerR, DNA binding LO004_RS12610 PF00376 MerR family regulatory protein LO004_RS12620 PF02677 Epoxyqueuosine reductase QueH LO004_RS12635 PF07690 Major Facilitator Superfamily LO004_RS12640 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LO004_RS12650 PF03466 LysR substrate binding domain LO004_RS12650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LO004_RS12675 PF06812 ImpA, N-terminal, type VI secretion system LO004_RS12680 PF00004 ATPase family associated with various cellular activities (AAA) LO004_RS12680 PF07724 AAA domain (Cdc48 subfamily) LO004_RS12680 PF17871 AAA lid domain LO004_RS12680 PF10431 C-terminal, D2-small domain, of ClpB protein LO004_RS12695 PF00691 OmpA family LO004_RS12695 PF01389 OmpA-like transmembrane domain LO004_RS12705 PF06761 Intracellular multiplication and human macrophage-killing LO004_RS12705 PF06744 Type VI secretion protein IcmF C-terminal LO004_RS12705 PF14331 ImcF-related N-terminal domain LO004_RS12720 PF05947 Type VI secretion system, TssF LO004_RS12735 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath LO004_RS12760 PF00005 ABC transporter LO004_RS12765 PF00497 Bacterial extracellular solute-binding proteins, family 3 LO004_RS12770 PF01425 Amidase LO004_RS12775 PF08753 NikR C terminal nickel binding domain LO004_RS12775 PF01402 Ribbon-helix-helix protein, copG family LO004_RS12785 PF01638 HxlR-like helix-turn-helix LO004_RS12790 PF02525 Flavodoxin-like fold LO004_RS12795 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LO004_RS12795 PF00289 Biotin carboxylase, N-terminal domain LO004_RS12795 PF02785 Biotin carboxylase C-terminal domain LO004_RS12810 PF08240 Alcohol dehydrogenase GroES-like domain LO004_RS12810 PF13823 Alcohol dehydrogenase GroES-associated LO004_RS12810 PF00107 Zinc-binding dehydrogenase LO004_RS12820 PF00440 Bacterial regulatory proteins, tetR family LO004_RS12835 PF13018 Extended Signal Peptide of Type V secretion system LO004_RS12835 PF13332 Hemagglutinin repeat LO004_RS12835 PF05860 haemagglutination activity domain LO004_RS12835 PF04829 Pre-toxin domain with VENN motif LO004_RS12840 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB LO004_RS12840 PF08479 POTRA domain, ShlB-type LO004_RS12840 PF17287 POTRA domain LO004_RS12845 PF00654 Voltage gated chloride channel LO004_RS12850 PF00289 Biotin carboxylase, N-terminal domain LO004_RS12850 PF00364 Biotin-requiring enzyme LO004_RS12850 PF02785 Biotin carboxylase C-terminal domain LO004_RS12850 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LO004_RS12860 PF07286 Protein of unknown function (DUF1445) LO004_RS12865 PF03746 LamB/YcsF family LO004_RS12870 PF01566 Natural resistance-associated macrophage protein LO004_RS12875 PF03466 LysR substrate binding domain LO004_RS12875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LO004_RS12905 PF05593 RHS Repeat LO004_RS12905 PF03527 RHS protein LO004_RS12910 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) LO004_RS12910 PF04717 Type VI secretion system, phage-baseplate injector LO004_RS12910 PF13296 Putative type VI secretion system Rhs element Vgr LO004_RS12935 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LO004_RS12935 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LO004_RS12960 PF07690 Major Facilitator Superfamily LO004_RS12975 PF03279 Bacterial lipid A biosynthesis acyltransferase LO004_RS12980 PF00563 EAL domain LO004_RS12980 PF00990 Diguanylate cyclase, GGDEF domain LO004_RS12980 PF03707 Bacterial signalling protein N terminal repeat LO004_RS12985 PF00892 EamA-like transporter family LO004_RS12990 PF01037 Lrp/AsnC ligand binding domain LO004_RS12995 PF00488 MutS domain V LO004_RS12995 PF01624 MutS domain I LO004_RS12995 PF05188 MutS domain II LO004_RS12995 PF05192 MutS domain III LO004_RS12995 PF05190 MutS family domain IV LO004_RS13005 PF00037 4Fe-4S binding domain LO004_RS13005 PF11953 Domain of unknown function (DUF3470) LO004_RS13015 PF01596 O-methyltransferase LO004_RS13025 PF00132 Bacterial transferase hexapeptide (six repeats) LO004_RS13030 PF01205 Uncharacterized protein family UPF0029 LO004_RS13040 PF03412 Peptidase C39 family LO004_RS13040 PF00005 ABC transporter LO004_RS13040 PF00664 ABC transporter transmembrane region LO004_RS13045 PF02321 Outer membrane efflux protein LO004_RS13050 PF12399 Branched-chain amino acid ATP-binding cassette transporter LO004_RS13050 PF00005 ABC transporter LO004_RS13055 PF03968 OstA-like protein LO004_RS13070 PF01380 SIS domain LO004_RS13070 PF00571 CBS domain LO004_RS13075 PF09190 DALR domain LO004_RS13075 PF01406 tRNA synthetases class I (C) catalytic domain LO004_RS13085 PF00589 Phage integrase family LO004_RS13205 PF10668 Phage terminase small subunit LO004_RS13205 PF03592 Terminase small subunit LO004_RS13235 PF01381 Helix-turn-helix LO004_RS13335 PF01638 HxlR-like helix-turn-helix LO004_RS13340 PF07690 Major Facilitator Superfamily LO004_RS13365 PF14748 Pyrroline-5-carboxylate reductase dimerisation LO004_RS13365 PF03807 NADP oxidoreductase coenzyme F420-dependent LO004_RS13375 PF00313 'Cold-shock' DNA-binding domain LO004_RS13380 PF01810 LysE type translocator LO004_RS13410 PF13742 OB-fold nucleic acid binding domain LO004_RS13410 PF02601 Exonuclease VII, large subunit LO004_RS13445 PF09278 MerR, DNA binding LO004_RS13445 PF00376 MerR family regulatory protein LO004_RS13450 PF00403 Heavy-metal-associated domain LO004_RS13455 PF00403 Heavy-metal-associated domain LO004_RS13460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LO004_RS13460 PF03466 LysR substrate binding domain LO004_RS13470 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LO004_RS13470 PF00355 Rieske [2Fe-2S] domain LO004_RS13475 PF00866 Ring hydroxylating beta subunit LO004_RS13480 PF00970 Oxidoreductase FAD-binding domain LO004_RS13480 PF00111 2Fe-2S iron-sulfur cluster binding domain LO004_RS13480 PF00175 Oxidoreductase NAD-binding domain LO004_RS13485 PF00106 short chain dehydrogenase LO004_RS13490 PF03594 Benzoate membrane transport protein LO004_RS13495 PF07690 Major Facilitator Superfamily LO004_RS13505 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LO004_RS13505 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LO004_RS13510 PF00270 DEAD/DEAH box helicase LO004_RS13510 PF11898 Domain of unknown function (DUF3418) LO004_RS13510 PF04408 Helicase associated domain (HA2) LO004_RS13510 PF00271 Helicase conserved C-terminal domain LO004_RS13510 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LO004_RS13515 PF10417 C-terminal domain of 1-Cys peroxiredoxin LO004_RS13515 PF00578 AhpC/TSA family LO004_RS13535 PF07992 Pyridine nucleotide-disulphide oxidoreductase LO004_RS13535 PF13192 Thioredoxin domain LO004_RS13600 PF02798 Glutathione S-transferase, N-terminal domain LO004_RS13600 PF00043 Glutathione S-transferase, C-terminal domain LO004_RS13610 PF02390 Putative methyltransferase LO004_RS13615 PF00043 Glutathione S-transferase, C-terminal domain LO004_RS13615 PF13417 Glutathione S-transferase, N-terminal domain LO004_RS13625 PF13488 Glycine zipper LO004_RS13625 PF00691 OmpA family LO004_RS13630 PF01979 Amidohydrolase family LO004_RS13635 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LO004_RS13635 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LO004_RS13645 PF10672 S-adenosylmethionine-dependent methyltransferase LO004_RS13645 PF01170 Putative RNA methylase family UPF0020 LO004_RS13645 PF02926 THUMP domain LO004_RS13660 PF00004 ATPase family associated with various cellular activities (AAA) LO004_RS13660 PF07724 AAA domain (Cdc48 subfamily) LO004_RS13660 PF17871 AAA lid domain LO004_RS13660 PF02861 Clp amino terminal domain, pathogenicity island component LO004_RS13660 PF10431 C-terminal, D2-small domain, of ClpB protein LO004_RS13675 PF02566 OsmC-like protein LO004_RS13685 PF00027 Cyclic nucleotide-binding domain LO004_RS13685 PF13545 Crp-like helix-turn-helix domain LO004_RS13690 PF00248 Aldo/keto reductase family LO004_RS13705 PF00709 Adenylosuccinate synthetase LO004_RS13710 PF13393 Histidyl-tRNA synthetase LO004_RS13720 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LO004_RS13720 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LO004_RS13725 PF02272 DHHA1 domain LO004_RS13725 PF01411 tRNA synthetases class II (A) LO004_RS13725 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LO004_RS13730 PF13356 Arm DNA-binding domain LO004_RS13730 PF00589 Phage integrase family LO004_RS13735 PF00717 Peptidase S24-like LO004_RS13740 PF11799 impB/mucB/samB family C-terminal domain LO004_RS13740 PF00817 impB/mucB/samB family LO004_RS13740 PF13438 Domain of unknown function (DUF4113) LO004_RS13800 PF01551 Peptidase family M23 LO004_RS13800 PF10145 Phage-related minor tail protein LO004_RS13800 PF01464 Transglycosylase SLT domain LO004_RS13815 PF03869 Arc-like DNA binding domain LO004_RS13825 PF13737 Transposase DDE domain LO004_RS13840 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system LO004_RS14020 PF00145 C-5 cytosine-specific DNA methylase LO004_RS14120 PF00696 Amino acid kinase family LO004_RS14120 PF13840 ACT domain LO004_RS14120 PF01842 ACT domain LO004_RS14125 PF02599 Global regulator protein family LO004_RS14130 PF01351 Ribonuclease HII LO004_RS14140 PF01292 Prokaryotic cytochrome b561 LO004_RS14145 PF00962 Adenosine/AMP deaminase LO004_RS14150 PF00860 Permease family LO004_RS14160 PF00743 Flavin-binding monooxygenase-like LO004_RS14165 PF00106 short chain dehydrogenase LO004_RS14175 PF02678 Pirin LO004_RS14175 PF17954 Quercetinase C-terminal cupin domain LO004_RS14180 PF17932 Tetracyclin repressor-like, C-terminal domain LO004_RS14180 PF00440 Bacterial regulatory proteins, tetR family LO004_RS14190 PF00106 short chain dehydrogenase LO004_RS14195 PF00743 Flavin-binding monooxygenase-like LO004_RS14200 PF04072 Leucine carboxyl methyltransferase LO004_RS14205 PF12833 Helix-turn-helix domain LO004_RS14205 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LO004_RS14210 PF00743 Flavin-binding monooxygenase-like LO004_RS14215 PF00106 short chain dehydrogenase LO004_RS14220 PF07859 alpha/beta hydrolase fold LO004_RS14225 PF05199 GMC oxidoreductase LO004_RS14230 PF03573 outer membrane porin, OprD family LO004_RS14235 PF07690 Major Facilitator Superfamily LO004_RS14240 PF00884 Sulfatase LO004_RS14245 PF03781 Sulfatase-modifying factor enzyme 1 LO004_RS14255 PF00355 Rieske [2Fe-2S] domain LO004_RS14260 PF00111 2Fe-2S iron-sulfur cluster binding domain LO004_RS14260 PF00175 Oxidoreductase NAD-binding domain LO004_RS14275 PF07690 Major Facilitator Superfamily LO004_RS14280 PF00378 Enoyl-CoA hydratase/isomerase LO004_RS14285 PF00171 Aldehyde dehydrogenase family LO004_RS14295 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LO004_RS14295 PF02770 Acyl-CoA dehydrogenase, middle domain LO004_RS14295 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LO004_RS14300 PF03573 outer membrane porin, OprD family LO004_RS14315 PF07519 Tannase and feruloyl esterase LO004_RS14320 PF00392 Bacterial regulatory proteins, gntR family LO004_RS14320 PF07729 FCD domain LO004_RS14325 PF00171 Aldehyde dehydrogenase family LO004_RS14330 PF00701 Dihydrodipicolinate synthetase family LO004_RS14335 PF13378 Enolase C-terminal domain-like LO004_RS14340 PF07690 Major Facilitator Superfamily LO004_RS14345 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus LO004_RS14345 PF08666 SAF domain LO004_RS14350 PF00892 EamA-like transporter family LO004_RS14360 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LO004_RS14360 PF12833 Helix-turn-helix domain LO004_RS14365 PF00171 Aldehyde dehydrogenase family LO004_RS14385 PF00324 Amino acid permease LO004_RS14390 PF04958 Arginine N-succinyltransferase beta subunit LO004_RS14395 PF00202 Aminotransferase class-III LO004_RS14405 PF00171 Aldehyde dehydrogenase family LO004_RS14415 PF07729 FCD domain LO004_RS14415 PF00392 Bacterial regulatory proteins, gntR family LO004_RS14425 PF00324 Amino acid permease LO004_RS14430 PF01266 FAD dependent oxidoreductase LO004_RS14435 PF00324 Amino acid permease LO004_RS14495 PF03527 RHS protein LO004_RS14495 PF05593 RHS Repeat LO004_RS14500 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) LO004_RS14500 PF13296 Putative type VI secretion system Rhs element Vgr LO004_RS14500 PF04717 Type VI secretion system, phage-baseplate injector LO004_RS14510 PF03180 NLPA lipoprotein LO004_RS14530 PF07992 Pyridine nucleotide-disulphide oxidoreductase LO004_RS14530 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LO004_RS14535 PF00764 Arginosuccinate synthase LO004_RS14545 PF13737 Transposase DDE domain LO004_RS14555 PF01979 Amidohydrolase family LO004_RS14560 PF00929 Exonuclease LO004_RS14570 PF07715 TonB-dependent Receptor Plug Domain LO004_RS14570 PF00593 TonB dependent receptor LO004_RS14575 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LO004_RS14575 PF07992 Pyridine nucleotide-disulphide oxidoreductase LO004_RS14580 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LO004_RS14580 PF00005 ABC transporter LO004_RS14585 PF00528 Binding-protein-dependent transport system inner membrane component LO004_RS14585 PF12911 N-terminal TM domain of oligopeptide transport permease C LO004_RS14590 PF00528 Binding-protein-dependent transport system inner membrane component LO004_RS14595 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LO004_RS14600 PF01476 LysM domain LO004_RS14600 PF01464 Transglycosylase SLT domain LO004_RS14600 PF01476 LysM domain LO004_RS14600 PF01464 Transglycosylase SLT domain LO004_RS14605 PF00929 Exonuclease LO004_RS14615 PF09297 NADH pyrophosphatase zinc ribbon domain LO004_RS14615 PF00293 NUDIX domain LO004_RS14625 PF04972 BON domain LO004_RS14630 PF02021 Uncharacterised protein family UPF0102 LO004_RS14635 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LO004_RS14645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LO004_RS14645 PF03466 LysR substrate binding domain LO004_RS14650 PF01810 LysE type translocator LO004_RS14660 PF13411 MerR HTH family regulatory protein LO004_RS14670 PF01494 FAD binding domain LO004_RS14675 PF01494 FAD binding domain LO004_RS14680 PF05195 Aminopeptidase P, N-terminal domain LO004_RS14680 PF00557 Metallopeptidase family M24 LO004_RS14720 PF01812 5-formyltetrahydrofolate cyclo-ligase family LO004_RS14730 PF00004 ATPase family associated with various cellular activities (AAA) LO004_RS14730 PF05362 Lon protease (S16) C-terminal proteolytic domain LO004_RS14730 PF02190 ATP-dependent protease La (LON) substrate-binding domain LO004_RS14735 PF02590 Predicted SPOUT methyltransferase LO004_RS14740 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LO004_RS14750 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LO004_RS14750 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LO004_RS14755 PF04060 Putative Fe-S cluster LO004_RS14760 PF10576 Iron-sulfur binding domain of endonuclease III LO004_RS14760 PF00633 Helix-hairpin-helix motif LO004_RS14760 PF00730 HhH-GPD superfamily base excision DNA repair protein LO004_RS14770 PF05191 Adenylate kinase, active site lid LO004_RS14785 PF03717 Penicillin-binding Protein dimerisation domain LO004_RS14785 PF00905 Penicillin binding protein transpeptidase domain LO004_RS14800 PF02492 CobW/HypB/UreG, nucleotide-binding domain LO004_RS14805 PF01730 UreF LO004_RS14810 PF05194 UreE urease accessory protein, C-terminal domain LO004_RS14810 PF02814 UreE urease accessory protein, N-terminal domain LO004_RS14815 PF01979 Amidohydrolase family LO004_RS14815 PF00449 Urease alpha-subunit, N-terminal domain LO004_RS14820 PF00699 Urease beta subunit LO004_RS14825 PF00547 Urease, gamma subunit LO004_RS14830 PF01774 UreD urease accessory protein LO004_RS14845 PF00463 Isocitrate lyase family LO004_RS14850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LO004_RS14850 PF03466 LysR substrate binding domain LO004_RS14855 PF00571 CBS domain LO004_RS14855 PF01595 Cyclin M transmembrane N-terminal domain LO004_RS14855 PF03471 Transporter associated domain LO004_RS14860 PF03600 Citrate transporter LO004_RS14875 PF00009 Elongation factor Tu GTP binding domain LO004_RS14880 PF01507 Phosphoadenosine phosphosulfate reductase family LO004_RS14890 PF14052 Capsule assembly protein Wzi LO004_RS14895 PF00152 tRNA synthetases class II (D, K and N) LO004_RS14895 PF01336 OB-fold nucleic acid binding domain LO004_RS14910 PF00301 Rubredoxin LO004_RS14915 PF07992 Pyridine nucleotide-disulphide oxidoreductase LO004_RS14915 PF18113 Rubredoxin binding C-terminal domain LO004_RS14920 PF00561 alpha/beta hydrolase fold LO004_RS14925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LO004_RS14925 PF03466 LysR substrate binding domain LO004_RS14940 PF17941 Polyphosphate kinase C-terminal domain 1 LO004_RS14940 PF13089 Polyphosphate kinase N-terminal domain LO004_RS14940 PF13090 Polyphosphate kinase C-terminal domain 2 LO004_RS14940 PF02503 Polyphosphate kinase middle domain LO004_RS14945 PF00912 Transglycosylase LO004_RS14950 PF01694 Rhomboid family LO004_RS14960 PF00005 ABC transporter LO004_RS14965 PF13472 GDSL-like Lipase/Acylhydrolase family LO004_RS14970 PF00484 Carbonic anhydrase LO004_RS14975 PF00561 alpha/beta hydrolase fold LO004_RS14985 PF07715 TonB-dependent Receptor Plug Domain LO004_RS14985 PF00593 TonB dependent receptor LO004_RS14990 PF01106 NifU-like domain LO004_RS14990 PF01521 Iron-sulphur cluster biosynthesis LO004_RS15000 PF00884 Sulfatase LO004_RS15005 PF03781 Sulfatase-modifying factor enzyme 1 LO004_RS15020 PF00291 Pyridoxal-phosphate dependent enzyme LO004_RS15025 PF01384 Phosphate transporter family LO004_RS15030 PF02965 Vitamin B12 dependent methionine synthase, activation domain LO004_RS15030 PF02607 B12 binding domain LO004_RS15030 PF00809 Pterin binding enzyme LO004_RS15030 PF02310 B12 binding domain LO004_RS15030 PF02574 Homocysteine S-methyltransferase LO004_RS15035 PF02780 Transketolase, C-terminal domain LO004_RS15035 PF02779 Transketolase, pyrimidine binding domain LO004_RS15040 PF00456 Transketolase, thiamine diphosphate binding domain LO004_RS15045 PF07690 Major Facilitator Superfamily LO004_RS15055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LO004_RS15055 PF03466 LysR substrate binding domain LO004_RS15065 PF01263 Aldose 1-epimerase LO004_RS15070 PF07690 Major Facilitator Superfamily LO004_RS15075 PF12833 Helix-turn-helix domain LO004_RS15075 PF02311 AraC-like ligand binding domain LO004_RS15080 PF04960 Glutaminase LO004_RS15085 PF01327 Polypeptide deformylase LO004_RS15090 PF07690 Major Facilitator Superfamily LO004_RS15100 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LO004_RS15100 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LO004_RS15100 PF00205 Thiamine pyrophosphate enzyme, central domain LO004_RS15105 PF00171 Aldehyde dehydrogenase family LO004_RS15110 PF03447 Homoserine dehydrogenase, NAD binding domain LO004_RS15110 PF01958 Domain of unknown function DUF108 LO004_RS15120 PF12697 Alpha/beta hydrolase family LO004_RS15130 PF07690 Major Facilitator Superfamily LO004_RS15135 PF14759 Reductase C-terminal LO004_RS15135 PF07992 Pyridine nucleotide-disulphide oxidoreductase LO004_RS15140 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LO004_RS15150 PF00355 Rieske [2Fe-2S] domain LO004_RS15160 PF00355 Rieske [2Fe-2S] domain LO004_RS15165 PF09339 IclR helix-turn-helix domain LO004_RS15165 PF01614 Bacterial transcriptional regulator LO004_RS15180 PF00378 Enoyl-CoA hydratase/isomerase LO004_RS15190 PF00535 Glycosyl transferase family 2 LO004_RS15195 PF14883 Hypothetical glycosyl hydrolase family 13 LO004_RS15195 PF01522 Polysaccharide deacetylase LO004_RS15200 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LO004_RS15205 PF07152 YaeQ protein LO004_RS15210 PF00375 Sodium:dicarboxylate symporter family LO004_RS15215 PF02492 CobW/HypB/UreG, nucleotide-binding domain LO004_RS15215 PF07683 Cobalamin synthesis protein cobW C-terminal domain LO004_RS15225 PF03061 Thioesterase superfamily LO004_RS15235 PF02028 BCCT, betaine/carnitine/choline family transporter LO004_RS15240 PF02028 BCCT, betaine/carnitine/choline family transporter LO004_RS15245 PF00440 Bacterial regulatory proteins, tetR family LO004_RS15245 PF13977 BetI-type transcriptional repressor, C-terminal LO004_RS15250 PF00171 Aldehyde dehydrogenase family LO004_RS15255 PF05199 GMC oxidoreductase LO004_RS15255 PF00732 GMC oxidoreductase LO004_RS15260 PF06039 Malate:quinone oxidoreductase (Mqo) LO004_RS15270 PF02574 Homocysteine S-methyltransferase LO004_RS15275 PF13520 Amino acid permease LO004_RS15300 PF00701 Dihydrodipicolinate synthetase family LO004_RS15305 PF00083 Sugar (and other) transporter LO004_RS15335 PF07728 AAA domain (dynein-related subfamily) LO004_RS15335 PF12102 Domain of unknown function (DUF3578) LO004_RS15355 PF02384 N-6 DNA Methylase LO004_RS15370 PF07690 Major Facilitator Superfamily LO004_RS15375 PF13533 Biotin-lipoyl like LO004_RS15380 PF03061 Thioesterase superfamily LO004_RS15385 PF00490 Delta-aminolevulinic acid dehydratase LO004_RS15390 PF01266 FAD dependent oxidoreductase LO004_RS15395 PF08338 Domain of unknown function (DUF1731) LO004_RS15395 PF01370 NAD dependent epimerase/dehydratase family LO004_RS15415 PF00149 Calcineurin-like phosphoesterase LO004_RS15415 PF12320 Type 5 capsule protein repressor C-terminal domain LO004_RS15425 PF01168 Alanine racemase, N-terminal domain LO004_RS15430 PF00437 Type II/IV secretion system protein LO004_RS15435 PF00437 Type II/IV secretion system protein LO004_RS15440 PF01475 Ferric uptake regulator family LO004_RS15445 PF04355 SmpA / OmlA family LO004_RS15450 PF03658 RnfH family Ubiquitin LO004_RS15460 PF01814 Hemerythrin HHE cation binding domain LO004_RS15465 PF13230 Glutamine amidotransferases class-II LO004_RS15475 PF00696 Amino acid kinase family LO004_RS15480 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LO004_RS15480 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LO004_RS15480 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LO004_RS15480 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LO004_RS15485 PF00692 dUTPase LO004_RS15490 PF13361 UvrD-like helicase C-terminal domain LO004_RS15490 PF00580 UvrD/REP helicase N-terminal domain LO004_RS15495 PF00691 OmpA family LO004_RS15495 PF13488 Glycine zipper LO004_RS15500 PF01553 Acyltransferase LO004_RS15510 PF03775 Septum formation inhibitor MinC, C-terminal domain LO004_RS15515 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LO004_RS15520 PF03776 Septum formation topological specificity factor MinE LO004_RS15530 PF01810 LysE type translocator LO004_RS15535 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LO004_RS15535 PF17854 FtsK alpha domain LO004_RS15535 PF09397 Ftsk gamma domain LO004_RS15535 PF01580 FtsK/SpoIIIE family LO004_RS15540 PF07992 Pyridine nucleotide-disulphide oxidoreductase LO004_RS15545 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LO004_RS15550 PF04376 Arginine-tRNA-protein transferase, N terminus LO004_RS15550 PF04377 Arginine-tRNA-protein transferase, C terminus LO004_RS15555 PF00583 Acetyltransferase (GNAT) family LO004_RS15570 PF03143 Elongation factor Tu C-terminal domain LO004_RS15570 PF00009 Elongation factor Tu GTP binding domain LO004_RS15570 PF03144 Elongation factor Tu domain 2 LO004_RS15575 PF03144 Elongation factor Tu domain 2 LO004_RS15575 PF00009 Elongation factor Tu GTP binding domain LO004_RS15575 PF03764 Elongation factor G, domain IV LO004_RS15575 PF14492 Elongation Factor G, domain II LO004_RS15575 PF00679 Elongation factor G C-terminus LO004_RS15580 PF00177 Ribosomal protein S7p/S5e LO004_RS15585 PF00164 Ribosomal protein S12/S23 LO004_RS15595 PF00109 Beta-ketoacyl synthase, N-terminal domain LO004_RS15595 PF02801 Beta-ketoacyl synthase, C-terminal domain LO004_RS15600 PF03653 Uncharacterised protein family (UPF0093) LO004_RS15605 PF02678 Pirin LO004_RS15605 PF05726 Pirin C-terminal cupin domain LO004_RS15615 PF02540 NAD synthase LO004_RS15615 PF00795 Carbon-nitrogen hydrolase LO004_RS15630 PF00111 2Fe-2S iron-sulfur cluster binding domain LO004_RS15630 PF00970 Oxidoreductase FAD-binding domain LO004_RS15630 PF00175 Oxidoreductase NAD-binding domain LO004_RS15635 PF00171 Aldehyde dehydrogenase family LO004_RS15640 PF00355 Rieske [2Fe-2S] domain LO004_RS15640 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LO004_RS15645 PF07859 alpha/beta hydrolase fold LO004_RS15650 PF02028 BCCT, betaine/carnitine/choline family transporter LO004_RS15655 PF00180 Isocitrate/isopropylmalate dehydrogenase LO004_RS15660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LO004_RS15660 PF03466 LysR substrate binding domain LO004_RS15680 PF00037 4Fe-4S binding domain LO004_RS15685 PF01467 Cytidylyltransferase-like LO004_RS15690 PF01668 SmpB protein LO004_RS15695 PF03358 NADPH-dependent FMN reductase LO004_RS15700 PF02578 Multi-copper polyphenol oxidoreductase laccase LO004_RS15705 PF00849 RNA pseudouridylate synthase LO004_RS15705 PF01479 S4 domain LO004_RS15710 PF13525 Outer membrane lipoprotein LO004_RS15715 PF08275 DNA primase catalytic core, N-terminal domain LO004_RS15715 PF10410 DnaB-helicase binding domain of primase LO004_RS15715 PF01807 CHC2 zinc finger LO004_RS15715 PF08278 DNA primase DnaG DnaB-binding LO004_RS15720 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LO004_RS15720 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LO004_RS15720 PF01488 Shikimate / quinate 5-dehydrogenase LO004_RS15730 PF03550 Outer membrane lipoprotein LolB LO004_RS15735 PF00288 GHMP kinases N terminal domain LO004_RS15735 PF08544 GHMP kinases C terminal LO004_RS15760 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LO004_RS15760 PF14572 Phosphoribosyl synthetase-associated domain LO004_RS15765 PF01386 Ribosomal L25p family LO004_RS15770 PF01195 Peptidyl-tRNA hydrolase LO004_RS15775 PF02261 Aspartate decarboxylase LO004_RS15790 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LO004_RS15800 PF03070 TENA/THI-4/PQQC family LO004_RS15800 PF08543 Phosphomethylpyrimidine kinase LO004_RS15800 PF02581 Thiamine monophosphate synthase LO004_RS15805 PF04972 BON domain LO004_RS15805 PF01476 LysM domain LO004_RS15810 PF00550 Phosphopantetheine attachment site LO004_RS15820 PF00698 Acyl transferase domain LO004_RS15825 PF01783 Ribosomal L32p protein family LO004_RS15830 PF02620 Large ribosomal RNA subunit accumulation protein YceD LO004_RS15835 PF04315 Elongation factor P hydroxylase LO004_RS15840 PF01300 Telomere recombination LO004_RS15845 PF02616 Segregation and condensation protein ScpA LO004_RS15850 PF04079 Segregation and condensation complex subunit ScpB LO004_RS15855 PF01479 S4 domain LO004_RS15855 PF00849 RNA pseudouridylate synthase LO004_RS15870 PF00155 Aminotransferase class I and II LO004_RS15875 PF06968 Biotin and Thiamin Synthesis associated domain LO004_RS15875 PF04055 Radical SAM superfamily LO004_RS15875 PF00202 Aminotransferase class-III LO004_RS15880 PF12697 Alpha/beta hydrolase family LO004_RS15880 PF08241 Methyltransferase domain LO004_RS15885 PF02358 Trehalose-phosphatase LO004_RS15890 PF00982 Glycosyltransferase family 20 LO004_RS15895 PF07690 Major Facilitator Superfamily LO004_RS15900 PF00210 Ferritin-like domain LO004_RS15905 PF12826 Helix-hairpin-helix motif LO004_RS15905 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LO004_RS15905 PF03120 NAD-dependent DNA ligase OB-fold domain LO004_RS15905 PF01653 NAD-dependent DNA ligase adenylation domain LO004_RS15905 PF00533 BRCA1 C Terminus (BRCT) domain LO004_RS15915 PF06470 SMC proteins Flexible Hinge Domain LO004_RS15915 PF02463 RecF/RecN/SMC N terminal domain LO004_RS15925 PF01925 Sulfite exporter TauE/SafE LO004_RS15935 PF03309 Type III pantothenate kinase LO004_RS15940 PF00448 SRP54-type protein, GTPase domain LO004_RS15940 PF02881 SRP54-type protein, helical bundle domain LO004_RS15940 PF02978 Signal peptide binding domain LO004_RS15950 PF01207 Dihydrouridine synthase (Dus) LO004_RS15980 PF00692 dUTPase LO004_RS15995 PF01048 Phosphorylase superfamily LO004_RS16000 PF10609 NUBPL iron-transfer P-loop NTPase LO004_RS16010 PF09334 tRNA synthetases class I (M) LO004_RS16010 PF01588 Putative tRNA binding domain LO004_RS16035 PF13533 Biotin-lipoyl like LO004_RS16040 PF00291 Pyridoxal-phosphate dependent enzyme LO004_RS16055 PF05552 Conserved TM helix LO004_RS16070 PF00175 Oxidoreductase NAD-binding domain LO004_RS16070 PF00970 Oxidoreductase FAD-binding domain LO004_RS16075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LO004_RS16075 PF03466 LysR substrate binding domain LO004_RS16080 PF00313 'Cold-shock' DNA-binding domain LO004_RS16090 PF00361 Proton-conducting membrane transporter LO004_RS16095 PF00361 Proton-conducting membrane transporter LO004_RS16100 PF00361 Proton-conducting membrane transporter LO004_RS16100 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LO004_RS16105 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LO004_RS16110 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LO004_RS16115 PF12838 4Fe-4S dicluster domain LO004_RS16120 PF00146 NADH dehydrogenase LO004_RS16125 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LO004_RS16125 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LO004_RS16125 PF00384 Molybdopterin oxidoreductase LO004_RS16130 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LO004_RS16130 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LO004_RS16130 PF10531 SLBB domain LO004_RS16140 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LO004_RS16140 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LO004_RS16145 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LO004_RS16150 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LO004_RS16155 PF17151 Periplasmic sensor domain LO004_RS16155 PF00990 Diguanylate cyclase, GGDEF domain LO004_RS16165 PF00512 His Kinase A (phospho-acceptor) domain LO004_RS16165 PF00672 HAMP domain LO004_RS16165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LO004_RS16170 PF00486 Transcriptional regulatory protein, C terminal LO004_RS16170 PF00072 Response regulator receiver domain LO004_RS16180 PF02867 Ribonucleotide reductase, barrel domain LO004_RS16180 PF03477 ATP cone domain LO004_RS16180 PF00317 Ribonucleotide reductase, all-alpha domain LO004_RS16190 PF00268 Ribonucleotide reductase, small chain LO004_RS16205 PF02567 Phenazine biosynthesis-like protein LO004_RS16235 PF16295 Tetracyclin repressor-like, C-terminal domain LO004_RS16235 PF00440 Bacterial regulatory proteins, tetR family LO004_RS16240 PF01613 Flavin reductase like domain LO004_RS16245 PF08267 Cobalamin-independent synthase, N-terminal domain LO004_RS16245 PF01717 Cobalamin-independent synthase, Catalytic domain LO004_RS16255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LO004_RS16255 PF03466 LysR substrate binding domain LO004_RS16260 PF01810 LysE type translocator LO004_RS16270 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LO004_RS16270 PF12833 Helix-turn-helix domain LO004_RS16275 PF01546 Peptidase family M20/M25/M40 LO004_RS16275 PF07687 Peptidase dimerisation domain LO004_RS16285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LO004_RS16285 PF03466 LysR substrate binding domain LO004_RS16290 PF07690 Major Facilitator Superfamily LO004_RS16300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LO004_RS16300 PF03466 LysR substrate binding domain LO004_RS16305 PF14537 Cytochrome c3 LO004_RS16305 PF00890 FAD binding domain LO004_RS16315 PF02515 CoA-transferase family III LO004_RS16320 PF07690 Major Facilitator Superfamily LO004_RS16325 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LO004_RS16325 PF02770 Acyl-CoA dehydrogenase, middle domain LO004_RS16325 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LO004_RS16330 PF03466 LysR substrate binding domain LO004_RS16330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LO004_RS16335 PF00107 Zinc-binding dehydrogenase LO004_RS16335 PF08240 Alcohol dehydrogenase GroES-like domain LO004_RS16340 PF00962 Adenosine/AMP deaminase LO004_RS16365 PF02445 Quinolinate synthetase A protein LO004_RS16370 PF01960 ArgJ family LO004_RS16375 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LO004_RS16375 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LO004_RS16380 PF00893 Small Multidrug Resistance protein LO004_RS16395 PF07731 Multicopper oxidase LO004_RS16395 PF00394 Multicopper oxidase LO004_RS16395 PF07732 Multicopper oxidase LO004_RS16410 PF00834 Ribulose-phosphate 3 epimerase family LO004_RS16420 PF00756 Putative esterase LO004_RS16430 PF04445 Putative SAM-dependent methyltransferase LO004_RS16435 PF00814 Glycoprotease family LO004_RS16440 PF00132 Bacterial transferase hexapeptide (six repeats) LO004_RS16445 PF00293 NUDIX domain LO004_RS16485 PF04715 Anthranilate synthase component I, N terminal region LO004_RS16485 PF00425 chorismate binding enzyme LO004_RS16490 PF00155 Aminotransferase class I and II LO004_RS16495 PF00815 Histidinol dehydrogenase LO004_RS16500 PF01634 ATP phosphoribosyltransferase LO004_RS16505 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LO004_RS16510 PF01722 BolA-like protein LO004_RS16515 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LO004_RS16520 PF00309 Sigma-54 factor, Activator interacting domain (AID) LO004_RS16520 PF04963 Sigma-54 factor, core binding domain LO004_RS16520 PF04552 Sigma-54, DNA binding domain LO004_RS16565 PF00795 Carbon-nitrogen hydrolase LO004_RS16575 PF01047 MarR family LO004_RS16580 PF02566 OsmC-like protein LO004_RS16585 PF00437 Type II/IV secretion system protein LO004_RS16605 PF01367 5'-3' exonuclease, C-terminal SAM fold LO004_RS16605 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LO004_RS16605 PF00476 DNA polymerase family A LO004_RS16605 PF01612 3'-5' exonuclease LO004_RS16610 PF02325 YGGT family LO004_RS16615 PF14748 Pyrroline-5-carboxylate reductase dimerisation LO004_RS16615 PF03807 NADP oxidoreductase coenzyme F420-dependent LO004_RS16620 PF01171 PP-loop family LO004_RS16620 PF09179 TilS substrate binding domain LO004_RS16620 PF11734 TilS substrate C-terminal domain LO004_RS16625 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LO004_RS16630 PF02541 Ppx/GppA phosphatase family LO004_RS16635 PF00085 Thioredoxin LO004_RS16640 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LO004_RS16640 PF07498 Rho termination factor, N-terminal domain LO004_RS16640 PF07497 Rho termination factor, RNA-binding domain LO004_RS16655 PF00216 Bacterial DNA-binding protein LO004_RS16660 PF03483 B3/4 domain LO004_RS16660 PF03484 tRNA synthetase B5 domain LO004_RS16660 PF03147 Ferredoxin-fold anticodon binding domain LO004_RS16660 PF01588 Putative tRNA binding domain LO004_RS16660 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LO004_RS16665 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LO004_RS16665 PF01409 tRNA synthetases class II core domain (F) LO004_RS16685 PF00453 Ribosomal protein L20 LO004_RS16690 PF01632 Ribosomal protein L35 LO004_RS16700 PF07690 Major Facilitator Superfamily LO004_RS16705 PF09335 SNARE associated Golgi protein LO004_RS16710 PF02798 Glutathione S-transferase, N-terminal domain LO004_RS16710 PF00043 Glutathione S-transferase, C-terminal domain LO004_RS16715 PF05198 Translation initiation factor IF-3, N-terminal domain LO004_RS16715 PF00707 Translation initiation factor IF-3, C-terminal domain LO004_RS16720 PF03129 Anticodon binding domain LO004_RS16720 PF02824 TGS domain LO004_RS16720 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LO004_RS16720 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LO004_RS16725 PF00501 AMP-binding enzyme LO004_RS16725 PF13193 AMP-binding enzyme C-terminal domain LO004_RS16730 PF04751 Protein of unknown function (DUF615) LO004_RS16735 PF00381 PTS HPr component phosphorylation site LO004_RS16740 PF03668 P-loop ATPase protein family LO004_RS16745 PF02569 Pantoate-beta-alanine ligase LO004_RS16750 PF02548 Ketopantoate hydroxymethyltransferase LO004_RS16755 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LO004_RS16760 PF01743 Poly A polymerase head domain LO004_RS16760 PF12626 Polymerase A arginine-rich C-terminus LO004_RS16760 PF12627 Probable RNA and SrmB- binding site of polymerase A LO004_RS16770 PF03819 MazG nucleotide pyrophosphohydrolase domain LO004_RS16780 PF13291 ACT domain LO004_RS16780 PF02824 TGS domain LO004_RS16780 PF04607 Region found in RelA / SpoT proteins LO004_RS16785 PF05958 tRNA (Uracil-5-)-methyltransferase LO004_RS16795 PF00291 Pyridoxal-phosphate dependent enzyme LO004_RS16800 PF00672 HAMP domain LO004_RS16800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LO004_RS16800 PF00512 His Kinase A (phospho-acceptor) domain LO004_RS16800 PF01627 Hpt domain LO004_RS16800 PF00072 Response regulator receiver domain LO004_RS16800 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LO004_RS16805 PF00378 Enoyl-CoA hydratase/isomerase LO004_RS16810 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LO004_RS16810 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LO004_RS16815 PF01261 Xylose isomerase-like TIM barrel LO004_RS16825 PF00106 short chain dehydrogenase LO004_RS16830 PF02233 NAD(P) transhydrogenase beta subunit LO004_RS16835 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch LO004_RS16840 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LO004_RS16840 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LO004_RS16845 PF00892 EamA-like transporter family LO004_RS16855 PF07690 Major Facilitator Superfamily LO004_RS16885 PF07992 Pyridine nucleotide-disulphide oxidoreductase LO004_RS16890 PF03358 NADPH-dependent FMN reductase LO004_RS16895 PF01758 Sodium Bile acid symporter family LO004_RS16905 PF01022 Bacterial regulatory protein, arsR family LO004_RS16910 PF03960 ArsC family LO004_RS16915 PF13411 MerR HTH family regulatory protein LO004_RS16930 PF07664 Ferrous iron transport protein B C terminus LO004_RS16930 PF02421 Ferrous iron transport protein B LO004_RS16930 PF07670 Nucleoside recognition LO004_RS16940 PF00873 AcrB/AcrD/AcrF family LO004_RS16945 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LO004_RS16965 PF00394 Multicopper oxidase LO004_RS16965 PF07732 Multicopper oxidase LO004_RS16965 PF07731 Multicopper oxidase LO004_RS16975 PF00072 Response regulator receiver domain LO004_RS16975 PF00486 Transcriptional regulatory protein, C terminal LO004_RS16980 PF00512 His Kinase A (phospho-acceptor) domain LO004_RS16980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LO004_RS16980 PF00672 HAMP domain LO004_RS16985 PF04945 YHS domain LO004_RS17060 PF00589 Phage integrase family LO004_RS17065 PF01207 Dihydrouridine synthase (Dus) LO004_RS17075 PF03466 LysR substrate binding domain LO004_RS17075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LO004_RS17085 PF00899 ThiF family LO004_RS17090 PF00330 Aconitase family (aconitate hydratase) LO004_RS17090 PF00694 Aconitase C-terminal domain LO004_RS17095 PF01026 TatD related DNase LO004_RS17110 PF00009 Elongation factor Tu GTP binding domain LO004_RS17110 PF03144 Elongation factor Tu domain 2 LO004_RS17110 PF16658 Class II release factor RF3, C-terminal domain LO004_RS17130 PF03707 Bacterial signalling protein N terminal repeat LO004_RS17130 PF00563 EAL domain LO004_RS17130 PF00990 Diguanylate cyclase, GGDEF domain LO004_RS17135 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LO004_RS17135 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LO004_RS17140 PF10369 Small subunit of acetolactate synthase LO004_RS17145 PF00205 Thiamine pyrophosphate enzyme, central domain LO004_RS17145 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LO004_RS17145 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LO004_RS17155 PF08264 Anticodon-binding domain of tRNA LO004_RS17155 PF13603 Leucyl-tRNA synthetase, Domain 2 LO004_RS17155 PF00133 tRNA synthetases class I (I, L, M and V) LO004_RS17155 PF09334 tRNA synthetases class I (M) LO004_RS17170 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LO004_RS17175 PF00005 ABC transporter LO004_RS17175 PF02687 FtsX-like permease family LO004_RS17175 PF12704 MacB-like periplasmic core domain LO004_RS17180 PF02321 Outer membrane efflux protein LO004_RS17195 PF00929 Exonuclease LO004_RS17200 PF03193 RsgA GTPase LO004_RS17210 PF00462 Glutaredoxin LO004_RS17215 PF02556 Preprotein translocase subunit SecB LO004_RS17225 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LO004_RS17225 PF01926 50S ribosome-binding GTPase LO004_RS17230 PF13360 PQQ-like domain LO004_RS17240 PF03129 Anticodon binding domain LO004_RS17240 PF13393 Histidyl-tRNA synthetase LO004_RS17245 PF04551 GcpE protein LO004_RS17250 PF13464 Domain of unknown function (DUF4115) LO004_RS17260 PF04055 Radical SAM superfamily LO004_RS17265 PF00334 Nucleoside diphosphate kinase LO004_RS17270 PF04384 Iron-sulphur cluster assembly LO004_RS17275 PF01569 PAP2 superfamily LO004_RS17280 PF00534 Glycosyl transferases group 1 LO004_RS17280 PF13439 Glycosyltransferase Family 4 LO004_RS17285 PF17804 Tail specific protease N-terminal domain LO004_RS17285 PF03572 Peptidase family S41 LO004_RS17285 PF11818 C-terminal domain of tail specific protease (DUF3340) LO004_RS17285 PF00595 PDZ domain LO004_RS17290 PF00933 Glycosyl hydrolase family 3 N terminal domain LO004_RS17300 PF00561 alpha/beta hydrolase fold LO004_RS17305 PF00171 Aldehyde dehydrogenase family LO004_RS17310 PF00171 Aldehyde dehydrogenase family LO004_RS17315 PF01202 Shikimate kinase LO004_RS17320 PF02447 GntP family permease LO004_RS17325 PF01081 KDPG and KHG aldolase LO004_RS17330 PF00920 Dehydratase family LO004_RS17335 PF00871 Acetokinase family LO004_RS17340 PF07085 DRTGG domain LO004_RS17340 PF01515 Phosphate acetyl/butaryl transferase LO004_RS17345 PF05681 Fumarate hydratase (Fumerase) LO004_RS17345 PF05683 Fumarase C-terminus LO004_RS17360 PF07724 AAA domain (Cdc48 subfamily) LO004_RS17360 PF10431 C-terminal, D2-small domain, of ClpB protein LO004_RS17360 PF06689 ClpX C4-type zinc finger LO004_RS17365 PF00574 Clp protease LO004_RS17370 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LO004_RS17370 PF05698 Bacterial trigger factor protein (TF) C-terminus LO004_RS17370 PF05697 Bacterial trigger factor protein (TF) LO004_RS17375 PF07715 TonB-dependent Receptor Plug Domain LO004_RS17375 PF00593 TonB dependent receptor LO004_RS17380 PF13640 2OG-Fe(II) oxygenase superfamily LO004_RS17380 PF18331 PKHD-type hydroxylase C-terminal domain LO004_RS17385 PF00682 HMGL-like LO004_RS17385 PF08502 LeuA allosteric (dimerisation) domain LO004_RS17390 PF00561 alpha/beta hydrolase fold LO004_RS17395 PF00561 alpha/beta hydrolase fold LO004_RS17395 PF07021 Methionine biosynthesis protein MetW LO004_RS17405 PF01725 Ham1 family LO004_RS17415 PF02416 mttA/Hcf106 family LO004_RS17420 PF02416 mttA/Hcf106 family LO004_RS17425 PF00902 Sec-independent protein translocase protein (TatC) LO004_RS17490 PF01790 Prolipoprotein diacylglyceryl transferase LO004_RS17505 PF00303 Thymidylate synthase LO004_RS17510 PF00186 Dihydrofolate reductase LO004_RS17520 PF01625 Peptide methionine sulfoxide reductase LO004_RS17530 PF01618 MotA/TolQ/ExbB proton channel family LO004_RS17540 PF00551 Formyl transferase LO004_RS17540 PF01842 ACT domain LO004_RS17550 PF00171 Aldehyde dehydrogenase family LO004_RS17555 PF00830 Ribosomal L28 family LO004_RS17560 PF00471 Ribosomal protein L33 LO004_RS17565 PF00999 Sodium/hydrogen exchanger family LO004_RS17565 PF02254 TrkA-N domain LO004_RS17585 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) LO004_RS17590 PF00580 UvrD/REP helicase N-terminal domain LO004_RS17590 PF13361 UvrD-like helicase C-terminal domain LO004_RS17605 PF08272 Topoisomerase I zinc-ribbon-like LO004_RS17605 PF01131 DNA topoisomerase LO004_RS17605 PF01751 Toprim domain LO004_RS17605 PF01396 Topoisomerase DNA binding C4 zinc finger LO004_RS17615 PF01638 HxlR-like helix-turn-helix LO004_RS17620 PF00107 Zinc-binding dehydrogenase LO004_RS17620 PF08240 Alcohol dehydrogenase GroES-like domain LO004_RS17625 PF04102 SlyX LO004_RS17630 PF00005 ABC transporter LO004_RS17630 PF16326 ABC transporter C-terminal domain LO004_RS17630 PF12848 ABC transporter LO004_RS17635 PF01810 LysE type translocator LO004_RS17640 PF03279 Bacterial lipid A biosynthesis acyltransferase LO004_RS17650 PF00375 Sodium:dicarboxylate symporter family LO004_RS17660 PF01118 Semialdehyde dehydrogenase, NAD binding domain LO004_RS17660 PF02774 Semialdehyde dehydrogenase, dimerisation domain LO004_RS17680 PF01416 tRNA pseudouridine synthase LO004_RS17690 PF01176 Translation initiation factor 1A / IF-1 LO004_RS17705 PF00180 Isocitrate/isopropylmalate dehydrogenase LO004_RS17715 PF00694 Aconitase C-terminal domain LO004_RS17720 PF00330 Aconitase family (aconitate hydratase) LO004_RS17730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LO004_RS17730 PF03466 LysR substrate binding domain LO004_RS17740 PF00293 NUDIX domain LO004_RS17745 PF01590 GAF domain LO004_RS17745 PF00391 PEP-utilising enzyme, mobile domain LO004_RS17745 PF02896 PEP-utilising enzyme, TIM barrel domain LO004_RS17745 PF05524 PEP-utilising enzyme, N-terminal LO004_RS17750 PF00141 Peroxidase LO004_RS17755 PF12706 Beta-lactamase superfamily domain LO004_RS17760 PF03466 LysR substrate binding domain LO004_RS17760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LO004_RS17770 PF02798 Glutathione S-transferase, N-terminal domain LO004_RS17775 PF08279 HTH domain LO004_RS17775 PF13280 WYL domain LO004_RS17780 PF13419 Haloacid dehalogenase-like hydrolase LO004_RS17785 PF00849 RNA pseudouridylate synthase LO004_RS17785 PF01479 S4 domain LO004_RS17790 PF12111 Polyribonucleotide phosphorylase C terminal LO004_RS17790 PF10150 Ribonuclease E/G family LO004_RS17790 PF00575 S1 RNA binding domain LO004_RS17795 PF00501 AMP-binding enzyme LO004_RS17795 PF13193 AMP-binding enzyme C-terminal domain LO004_RS17805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LO004_RS17805 PF03466 LysR substrate binding domain LO004_RS17810 PF00106 short chain dehydrogenase LO004_RS17815 PF04055 Radical SAM superfamily LO004_RS17815 PF06969 HemN C-terminal domain LO004_RS17825 PF01554 MatE LO004_RS17830 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LO004_RS17830 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LO004_RS17830 PF02770 Acyl-CoA dehydrogenase, middle domain LO004_RS17835 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LO004_RS17835 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LO004_RS17840 PF03109 ABC1 family LO004_RS17845 PF01197 Ribosomal protein L31 LO004_RS17855 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LO004_RS17865 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LO004_RS17865 PF13247 4Fe-4S dicluster domain LO004_RS17865 PF07992 Pyridine nucleotide-disulphide oxidoreductase LO004_RS17875 PF03884 DNA gyrase inhibitor YacG LO004_RS17880 PF00753 Metallo-beta-lactamase superfamily LO004_RS17885 PF00762 Ferrochelatase LO004_RS17895 PF01177 Asp/Glu/Hydantoin racemase LO004_RS17915 PF01206 Sulfurtransferase TusA LO004_RS17920 PF03471 Transporter associated domain LO004_RS17920 PF00571 CBS domain LO004_RS17925 PF00795 Carbon-nitrogen hydrolase LO004_RS17930 PF01588 Putative tRNA binding domain LO004_RS17940 PF07963 Prokaryotic N-terminal methylation motif LO004_RS17940 PF08334 Type II secretion system (T2SS), protein G LO004_RS17945 PF00482 Type II secretion system (T2SS), protein F LO004_RS17950 PF00270 DEAD/DEAH box helicase LO004_RS17950 PF00271 Helicase conserved C-terminal domain LO004_RS17950 PF17764 3′ DNA-binding domain (3′BD) LO004_RS17950 PF18074 Primosomal protein N C-terminal domain LO004_RS17950 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LO004_RS17955 PF00999 Sodium/hydrogen exchanger family LO004_RS17955 PF02254 TrkA-N domain LO004_RS17960 PF01430 Hsp33 protein LO004_RS17970 PF01556 DnaJ C terminal domain LO004_RS17970 PF00226 DnaJ domain LO004_RS17980 PF01544 CorA-like Mg2+ transporter protein LO004_RS17985 PF00013 KH domain LO004_RS17985 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LO004_RS17985 PF01138 3' exoribonuclease family, domain 1 LO004_RS17985 PF03725 3' exoribonuclease family, domain 2 LO004_RS17985 PF00575 S1 RNA binding domain LO004_RS17990 PF00312 Ribosomal protein S15 LO004_RS17995 PF00144 Beta-lactamase LO004_RS18000 PF13538 UvrD-like helicase C-terminal domain LO004_RS18005 PF12705 PD-(D/E)XK nuclease superfamily LO004_RS18005 PF00580 UvrD/REP helicase N-terminal domain LO004_RS18005 PF13361 UvrD-like helicase C-terminal domain LO004_RS18010 PF17946 RecC C-terminal domain LO004_RS18020 PF03976 Polyphosphate kinase 2 (PPK2) LO004_RS18030 PF01209 ubiE/COQ5 methyltransferase family LO004_RS18040 PF03109 ABC1 family LO004_RS18045 PF01494 FAD binding domain LO004_RS18050 PF01502 Phosphoribosyl-AMP cyclohydrolase LO004_RS18065 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter LO004_RS18065 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LO004_RS18065 PF13244 Domain of unknown function (DUF4040) LO004_RS18065 PF00361 Proton-conducting membrane transporter LO004_RS18070 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LO004_RS18075 PF00361 Proton-conducting membrane transporter LO004_RS18080 PF01899 Na+/H+ ion antiporter subunit LO004_RS18085 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) LO004_RS18090 PF03334 Na+/H+ antiporter subunit LO004_RS18095 PF02033 Ribosome-binding factor A LO004_RS18100 PF00009 Elongation factor Tu GTP binding domain LO004_RS18100 PF11987 Translation-initiation factor 2 LO004_RS18100 PF08364 Bacterial translation initiation factor IF-2 associated region LO004_RS18100 PF04760 Translation initiation factor IF-2, N-terminal region LO004_RS18105 PF00575 S1 RNA binding domain LO004_RS18105 PF13184 NusA-like KH domain LO004_RS18105 PF08529 NusA N-terminal domain LO004_RS18110 PF02576 RimP N-terminal domain LO004_RS18110 PF17384 RimP C-terminal SH3 domain LO004_RS18130 PF03840 Preprotein translocase SecG subunit LO004_RS18135 PF00121 Triosephosphate isomerase LO004_RS18140 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LO004_RS18140 PF00437 Type II/IV secretion system protein LO004_RS18145 PF00482 Type II secretion system (T2SS), protein F LO004_RS18150 PF06750 Bacterial Peptidase A24 N-terminal domain LO004_RS18150 PF01478 Type IV leader peptidase family LO004_RS18155 PF01121 Dephospho-CoA kinase LO004_RS18165 PF00588 SpoU rRNA Methylase family LO004_RS18165 PF08032 RNA 2'-O ribose methyltransferase substrate binding LO004_RS18170 PF06865 Pyrimidine/purine nucleoside phosphorylase LO004_RS18180 PF02463 RecF/RecN/SMC N terminal domain LO004_RS18185 PF02622 Uncharacterized ACR, COG1678 LO004_RS18190 PF03652 Holliday junction resolvase LO004_RS18195 PF13533 Biotin-lipoyl like LO004_RS18220 PF02805 Metal binding domain of Ada LO004_RS18220 PF12833 Helix-turn-helix domain LO004_RS18220 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LO004_RS18220 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LO004_RS18225 PF01066 CDP-alcohol phosphatidyltransferase LO004_RS18235 PF01541 GIY-YIG catalytic domain LO004_RS18235 PF02151 UvrB/uvrC motif LO004_RS18235 PF08459 UvrC Helix-hairpin-helix N-terminal LO004_RS18250 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LO004_RS18250 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LO004_RS18250 PF00378 Enoyl-CoA hydratase/isomerase LO004_RS18255 PF02803 Thiolase, C-terminal domain LO004_RS18255 PF00108 Thiolase, N-terminal domain LO004_RS18275 PF09278 MerR, DNA binding LO004_RS18275 PF00376 MerR family regulatory protein LO004_RS18285 PF01323 DSBA-like thioredoxin domain LO004_RS18295 PF13340 Putative transposase of IS4/5 family (DUF4096) LO004_RS18305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LO004_RS18305 PF00183 Hsp90 protein LO004_RS18320 PF13726 Na+-H+ antiporter family LO004_RS18320 PF03553 Na+/H+ antiporter family LO004_RS18325 PF00561 alpha/beta hydrolase fold LO004_RS18345 PF04997 RNA polymerase Rpb1, domain 1 LO004_RS18345 PF00623 RNA polymerase Rpb1, domain 2 LO004_RS18345 PF04983 RNA polymerase Rpb1, domain 3 LO004_RS18345 PF05000 RNA polymerase Rpb1, domain 4 LO004_RS18345 PF04998 RNA polymerase Rpb1, domain 5 LO004_RS18350 PF04563 RNA polymerase beta subunit LO004_RS18350 PF04561 RNA polymerase Rpb2, domain 2 LO004_RS18350 PF04565 RNA polymerase Rpb2, domain 3 LO004_RS18350 PF10385 RNA polymerase beta subunit external 1 domain LO004_RS18350 PF00562 RNA polymerase Rpb2, domain 6 LO004_RS18350 PF04560 RNA polymerase Rpb2, domain 7 LO004_RS18355 PF00542 Ribosomal protein L7/L12 C-terminal domain LO004_RS18355 PF16320 Ribosomal protein L7/L12 dimerisation domain LO004_RS18360 PF00466 Ribosomal protein L10 LO004_RS18365 PF00687 Ribosomal protein L1p/L10e family LO004_RS18370 PF00298 Ribosomal protein L11, RNA binding domain LO004_RS18370 PF03946 Ribosomal protein L11, N-terminal domain LO004_RS18375 PF00467 KOW motif LO004_RS18375 PF02357 Transcription termination factor nusG LO004_RS18380 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LO004_RS18390 PF03143 Elongation factor Tu C-terminal domain LO004_RS18390 PF03144 Elongation factor Tu domain 2 LO004_RS18390 PF00009 Elongation factor Tu GTP binding domain LO004_RS18415 PF00425 chorismate binding enzyme LO004_RS18415 PF04715 Anthranilate synthase component I, N terminal region LO004_RS18420 PF13419 Haloacid dehalogenase-like hydrolase LO004_RS18425 PF12401 Protein of unknown function (DUF2662) LO004_RS18425 PF00498 FHA domain LO004_RS18430 PF00263 Bacterial type II and III secretion system protein LO004_RS18430 PF03958 Bacterial type II/III secretion system short domain LO004_RS18445 PF00816 H-NS histone family LO004_RS18470 PF03900 Porphobilinogen deaminase, C-terminal domain LO004_RS18470 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LO004_RS18475 PF04397 LytTr DNA-binding domain LO004_RS18475 PF00072 Response regulator receiver domain LO004_RS18480 PF07694 5TMR of 5TMR-LYT LO004_RS18480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LO004_RS18480 PF06580 Histidine kinase LO004_RS18485 PF00206 Lyase LO004_RS18485 PF14698 Argininosuccinate lyase C-terminal LO004_RS18490 PF04362 Bacterial Fe(2+) trafficking LO004_RS18495 PF01895 PhoU domain LO004_RS18500 PF02321 Outer membrane efflux protein LO004_RS18505 PF00892 EamA-like transporter family LO004_RS18520 PF13667 ThiC-associated domain LO004_RS18520 PF01964 Radical SAM ThiC family LO004_RS18525 PF00293 NUDIX domain LO004_RS18530 PF00149 Calcineurin-like phosphoesterase LO004_RS18535 PF01258 Prokaryotic dksA/traR C4-type zinc finger LO004_RS18540 PF00749 tRNA synthetases class I (E and Q), catalytic domain LO004_RS18545 PF01098 Cell cycle protein LO004_RS18550 PF02875 Mur ligase family, glutamate ligase domain LO004_RS18550 PF08245 Mur ligase middle domain LO004_RS18560 PF07670 Nucleoside recognition LO004_RS18560 PF02421 Ferrous iron transport protein B LO004_RS18560 PF07664 Ferrous iron transport protein B C terminus LO004_RS18570 PF02899 Phage integrase, N-terminal SAM-like domain LO004_RS18570 PF00589 Phage integrase family LO004_RS18575 PF13098 Thioredoxin-like domain LO004_RS18575 PF10411 Disulfide bond isomerase protein N-terminus LO004_RS18580 PF01842 ACT domain LO004_RS18580 PF00742 Homoserine dehydrogenase LO004_RS18580 PF03447 Homoserine dehydrogenase, NAD binding domain LO004_RS18585 PF00291 Pyridoxal-phosphate dependent enzyme LO004_RS18590 PF00768 D-alanyl-D-alanine carboxypeptidase LO004_RS18595 PF00196 Bacterial regulatory proteins, luxR family LO004_RS18595 PF00072 Response regulator receiver domain LO004_RS18600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LO004_RS18600 PF00512 His Kinase A (phospho-acceptor) domain LO004_RS18605 PF02954 Bacterial regulatory protein, Fis family LO004_RS18605 PF00072 Response regulator receiver domain LO004_RS18605 PF00158 Sigma-54 interaction domain LO004_RS18610 PF03572 Peptidase family S41 LO004_RS18610 PF00595 PDZ domain LO004_RS18615 PF01676 Metalloenzyme superfamily LO004_RS18615 PF06415 BPG-independent PGAM N-terminus (iPGM_N) LO004_RS18620 PF03739 Lipopolysaccharide export system permease LptF/LptG LO004_RS18630 PF00883 Cytosol aminopeptidase family, catalytic domain LO004_RS18630 PF02789 Cytosol aminopeptidase family, N-terminal domain LO004_RS18650 PF00677 Lumazine binding domain LO004_RS18660 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LO004_RS18660 PF01872 RibD C-terminal domain LO004_RS18665 PF03477 ATP cone domain LO004_RS18670 PF00909 Ammonium Transporter Family LO004_RS18675 PF00543 Nitrogen regulatory protein P-II LO004_RS18685 PF01078 Magnesium chelatase, subunit ChlI LO004_RS18685 PF13335 Magnesium chelatase, subunit ChlI C-terminal LO004_RS18700 PF00701 Dihydrodipicolinate synthetase family LO004_RS18715 PF03573 outer membrane porin, OprD family LO004_RS18720 PF00719 Inorganic pyrophosphatase LO004_RS18735 PF00501 AMP-binding enzyme LO004_RS18735 PF13193 AMP-binding enzyme C-terminal domain LO004_RS18740 PF03989 DNA gyrase C-terminal domain, beta-propeller LO004_RS18740 PF00521 DNA gyrase/topoisomerase IV, subunit A LO004_RS18745 PF07690 Major Facilitator Superfamily LO004_RS18750 PF03458 UPF0126 domain LO004_RS18755 PF02810 SEC-C motif LO004_RS18760 PF03471 Transporter associated domain LO004_RS18760 PF03741 Integral membrane protein TerC family LO004_RS18765 PF03641 Possible lysine decarboxylase LO004_RS18770 PF07690 Major Facilitator Superfamily LO004_RS18780 PF00817 impB/mucB/samB family LO004_RS18780 PF11799 impB/mucB/samB family C-terminal domain LO004_RS18780 PF11798 IMS family HHH motif LO004_RS18800 PF08497 Radical SAM N-terminal LO004_RS18800 PF11842 Domain of unknown function (DUF3362) LO004_RS18800 PF04055 Radical SAM superfamily LO004_RS18820 PF03358 NADPH-dependent FMN reductase LO004_RS18830 PF00291 Pyridoxal-phosphate dependent enzyme LO004_RS18865 PF00579 tRNA synthetases class I (W and Y) LO004_RS18870 PF03702 Anhydro-N-acetylmuramic acid kinase LO004_RS18875 PF00561 alpha/beta hydrolase fold LO004_RS18880 PF01521 Iron-sulphur cluster biosynthesis LO004_RS18900 PF00005 ABC transporter LO004_RS18900 PF12848 ABC transporter LO004_RS18905 PF09335 SNARE associated Golgi protein LO004_RS18915 PF00986 DNA gyrase B subunit, carboxyl terminus LO004_RS18915 PF18053 DNA gyrase B subunit insert domain LO004_RS18915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LO004_RS18915 PF01751 Toprim domain LO004_RS18915 PF00204 DNA gyrase B LO004_RS18920 PF02463 RecF/RecN/SMC N terminal domain LO004_RS18925 PF00712 DNA polymerase III beta subunit, N-terminal domain LO004_RS18925 PF02767 DNA polymerase III beta subunit, central domain LO004_RS18925 PF02768 DNA polymerase III beta subunit, C-terminal domain LO004_RS18930 PF11638 DnaA N-terminal domain LO004_RS18930 PF08299 Bacterial dnaA protein helix-turn-helix LO004_RS18930 PF00308 Bacterial dnaA protein LO004_RS18965 PF13737 Transposase DDE domain LO004_RS19025 PF01435 Peptidase family M48 LO004_RS19055 PF00665 Integrase core domain LO004_RS19085 PF00582 Universal stress protein family LO004_RS19090 PF00916 Sulfate permease family LO004_RS19090 PF01740 STAS domain LO004_RS19120 PF00589 Phage integrase family LO004_RS19120 PF02899 Phage integrase, N-terminal SAM-like domain LO004_RS19145 PF00665 Integrase core domain LO004_RS19160 PF00809 Pterin binding enzyme LO004_RS19180 PF00239 Resolvase, N terminal domain LO004_RS19180 PF02796 Helix-turn-helix domain of resolvase LO004_RS19190 PF03358 NADPH-dependent FMN reductase LO004_RS19200 PF01758 Sodium Bile acid symporter family LO004_RS19300 PF07670 Nucleoside recognition LO004_RS19300 PF07664 Ferrous iron transport protein B C terminus LO004_RS19300 PF02421 Ferrous iron transport protein B LO004_RS19320 PF01131 DNA topoisomerase LO004_RS19320 PF01751 Toprim domain LO004_RS19320 PF01396 Topoisomerase DNA binding C4 zinc finger LO004_RS19390 PF00565 Staphylococcal nuclease homologue LO004_RS19510 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LO004_RS19510 PF00437 Type II/IV secretion system protein LO004_RS19560 PF13614 AAA domain LO004_RS19565 PF02195 ParB-like nuclease domain LO004_RS19565 PF17762 HTH domain found in ParB protein LO004_RS19575 PF11798 IMS family HHH motif LO004_RS19575 PF11799 impB/mucB/samB family C-terminal domain LO004_RS19575 PF00817 impB/mucB/samB family LO004_RS19575 PF13438 Domain of unknown function (DUF4113) LO004_RS19580 PF00717 Peptidase S24-like LO004_RS19605 PF04225 Opacity-associated protein A LysM-like domain LO004_RS19605 PF01551 Peptidase family M23 LO004_RS19860 PF10410 DnaB-helicase binding domain of primase LO004_RS19860 PF08275 DNA primase catalytic core, N-terminal domain LO004_RS19860 PF01807 CHC2 zinc finger LO004_RS19895 PF00625 Guanylate kinase LO004_RS19910 PF07015 VirC1 protein LO004_RS19920 PF00589 Phage integrase family LO004_RS19920 PF02899 Phage integrase, N-terminal SAM-like domain LO004_RS19955 PF07733 Bacterial DNA polymerase III alpha NTPase domain LO004_RS19955 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LO004_RS19955 PF14579 Helix-hairpin-helix motif LO004_RS19955 PF02811 PHP domain LO004_RS19965 PF07733 Bacterial DNA polymerase III alpha NTPase domain LO004_RS19965 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LO004_RS19965 PF14579 Helix-hairpin-helix motif LO004_RS19965 PF02811 PHP domain LO004_RS19980 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LO004_RS19980 PF01612 3'-5' exonuclease LO004_RS19980 PF00476 DNA polymerase family A LO004_RS19980 PF01367 5'-3' exonuclease, C-terminal SAM fold LO004_RS19985 PF00154 recA bacterial DNA recombination protein LO004_RS19985 PF03161 LAGLIDADG DNA endonuclease family LO004_RS20010 PF02463 RecF/RecN/SMC N terminal domain LO004_RS20010 PF06470 SMC proteins Flexible Hinge Domain LO004_RS20030 PF03477 ATP cone domain LO004_RS20030 PF00317 Ribonucleotide reductase, all-alpha domain LO004_RS20030 PF02867 Ribonucleotide reductase, barrel domain LO004_RS20035 PF00268 Ribonucleotide reductase, small chain LO004_RS20080 PF00929 Exonuclease LO004_RS20120 PF12161 HsdM N-terminal domain LO004_RS20120 PF02384 N-6 DNA Methylase LO004_RS20125 PF01420 Type I restriction modification DNA specificity domain LO004_RS20135 PF12008 Type I restriction and modification enzyme - subunit R C terminal LO004_RS20135 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LO004_RS20135 PF18766 SWI2/SNF2 ATPase LO004_RS20140 PF13737 Transposase DDE domain LO004_RS20145 PF11809 Domain of unknown function (DUF3330) LO004_RS20145 PF00563 EAL domain LO004_RS20150 PF05052 MerE protein LO004_RS20155 PF13411 MerR HTH family regulatory protein LO004_RS20160 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LO004_RS20160 PF00403 Heavy-metal-associated domain LO004_RS20160 PF07992 Pyridine nucleotide-disulphide oxidoreductase LO004_RS20165 PF03203 MerC mercury resistance protein LO004_RS20170 PF00403 Heavy-metal-associated domain LO004_RS20175 PF02411 MerT mercuric transport protein LO004_RS20180 PF09278 MerR, DNA binding LO004_RS20180 PF00376 MerR family regulatory protein LO004_RS20190 PF13737 Transposase DDE domain LO004_RS20250 PF04650 YSIRK type signal peptide LO004_RS20250 PF02216 B domain LO004_RS20250 PF00746 LPXTG cell wall anchor motif LO004_RS20250 PF01476 LysM domain LO004_RS20250 PF03373 Octapeptide repeat LO004_RS20265 PF02559 CarD-like/TRCF domain LO004_RS20265 PF00270 DEAD/DEAH box helicase LO004_RS20265 PF00271 Helicase conserved C-terminal domain LO004_RS20265 PF03461 TRCF domain LO004_RS20265 PF17757 UvrB interaction domain LO004_RS20285 PF00005 ABC transporter LO004_RS20285 PF09383 NIL domain LO004_RS20295 PF00210 Ferritin-like domain LO004_RS20310 PF01051 Initiator Replication protein LO004_RS20345 PF00313 'Cold-shock' DNA-binding domain