locus-tag class description H1D55_RS00005 PF00171 Aldehyde dehydrogenase family H1D55_RS00010 PF00378 Enoyl-CoA hydratase/isomerase H1D55_RS00015 PF07690 Major Facilitator Superfamily H1D55_RS00030 PF00111 2Fe-2S iron-sulfur cluster binding domain H1D55_RS00030 PF00175 Oxidoreductase NAD-binding domain H1D55_RS00035 PF00355 Rieske [2Fe-2S] domain H1D55_RS00040 PF07690 Major Facilitator Superfamily H1D55_RS00045 PF03573 outer membrane porin, OprD family H1D55_RS00050 PF05199 GMC oxidoreductase H1D55_RS00055 PF07859 alpha/beta hydrolase fold H1D55_RS00060 PF00106 short chain dehydrogenase H1D55_RS00065 PF00743 Flavin-binding monooxygenase-like H1D55_RS00070 PF12833 Helix-turn-helix domain H1D55_RS00070 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term H1D55_RS00075 PF04072 Leucine carboxyl methyltransferase H1D55_RS00080 PF00743 Flavin-binding monooxygenase-like H1D55_RS00085 PF00106 short chain dehydrogenase H1D55_RS00095 PF17932 Tetracyclin repressor-like, C-terminal domain H1D55_RS00095 PF00440 Bacterial regulatory proteins, tetR family H1D55_RS00100 PF02678 Pirin H1D55_RS00100 PF17954 Quercetinase C-terminal cupin domain H1D55_RS00110 PF00106 short chain dehydrogenase H1D55_RS00115 PF00743 Flavin-binding monooxygenase-like H1D55_RS00125 PF00860 Permease family H1D55_RS00130 PF00962 Adenosine/AMP deaminase H1D55_RS00135 PF01292 Prokaryotic cytochrome b561 H1D55_RS00145 PF01351 Ribonuclease HII H1D55_RS00150 PF02599 Global regulator protein family H1D55_RS00155 PF00696 Amino acid kinase family H1D55_RS00155 PF01842 ACT domain H1D55_RS00155 PF13840 ACT domain H1D55_RS00160 PF02272 DHHA1 domain H1D55_RS00160 PF01411 tRNA synthetases class II (A) H1D55_RS00160 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain H1D55_RS00165 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain H1D55_RS00165 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain H1D55_RS00170 PF13393 Histidyl-tRNA synthetase H1D55_RS00175 PF00709 Adenylosuccinate synthetase H1D55_RS00190 PF00248 Aldo/keto reductase family H1D55_RS00195 PF00027 Cyclic nucleotide-binding domain H1D55_RS00195 PF13545 Crp-like helix-turn-helix domain H1D55_RS00205 PF02566 OsmC-like protein H1D55_RS00220 PF00004 ATPase family associated with various cellular activities (AAA) H1D55_RS00220 PF10431 C-terminal, D2-small domain, of ClpB protein H1D55_RS00220 PF02861 Clp amino terminal domain, pathogenicity island component H1D55_RS00220 PF17871 AAA lid domain H1D55_RS00220 PF07724 AAA domain (Cdc48 subfamily) H1D55_RS00235 PF01170 Putative RNA methylase family UPF0020 H1D55_RS00235 PF02926 THUMP domain H1D55_RS00235 PF10672 S-adenosylmethionine-dependent methyltransferase H1D55_RS00245 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain H1D55_RS00245 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain H1D55_RS00250 PF01979 Amidohydrolase family H1D55_RS00255 PF13488 Glycine zipper H1D55_RS00255 PF00691 OmpA family H1D55_RS00265 PF13417 Glutathione S-transferase, N-terminal domain H1D55_RS00265 PF00043 Glutathione S-transferase, C-terminal domain H1D55_RS00285 PF02390 Putative methyltransferase H1D55_RS00295 PF02798 Glutathione S-transferase, N-terminal domain H1D55_RS00295 PF00043 Glutathione S-transferase, C-terminal domain H1D55_RS00305 PF07992 Pyridine nucleotide-disulphide oxidoreductase H1D55_RS00305 PF13192 Thioredoxin domain H1D55_RS00325 PF10417 C-terminal domain of 1-Cys peroxiredoxin H1D55_RS00325 PF00578 AhpC/TSA family H1D55_RS00330 PF00270 DEAD/DEAH box helicase H1D55_RS00330 PF11898 Domain of unknown function (DUF3418) H1D55_RS00330 PF04408 Helicase associated domain (HA2) H1D55_RS00330 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold H1D55_RS00330 PF00271 Helicase conserved C-terminal domain H1D55_RS00335 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III H1D55_RS00335 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal H1D55_RS00345 PF07690 Major Facilitator Superfamily H1D55_RS00350 PF03594 Benzoate membrane transport protein H1D55_RS00355 PF00106 short chain dehydrogenase H1D55_RS00360 PF00970 Oxidoreductase FAD-binding domain H1D55_RS00360 PF00111 2Fe-2S iron-sulfur cluster binding domain H1D55_RS00360 PF00175 Oxidoreductase NAD-binding domain H1D55_RS00365 PF00866 Ring hydroxylating beta subunit H1D55_RS00370 PF00848 Ring hydroxylating alpha subunit (catalytic domain) H1D55_RS00370 PF00355 Rieske [2Fe-2S] domain H1D55_RS00380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H1D55_RS00380 PF03466 LysR substrate binding domain H1D55_RS00390 PF00403 Heavy-metal-associated domain H1D55_RS00395 PF00376 MerR family regulatory protein H1D55_RS00395 PF09278 MerR, DNA binding H1D55_RS00430 PF13742 OB-fold nucleic acid binding domain H1D55_RS00430 PF02601 Exonuclease VII, large subunit H1D55_RS00460 PF01810 LysE type translocator H1D55_RS00465 PF00313 'Cold-shock' DNA-binding domain H1D55_RS00500 PF07690 Major Facilitator Superfamily H1D55_RS00505 PF01638 HxlR-like helix-turn-helix H1D55_RS00555 PF09190 DALR domain H1D55_RS00555 PF01406 tRNA synthetases class I (C) catalytic domain H1D55_RS00560 PF01380 SIS domain H1D55_RS00560 PF00571 CBS domain H1D55_RS00575 PF03968 OstA-like protein H1D55_RS00580 PF12399 Branched-chain amino acid ATP-binding cassette transporter H1D55_RS00580 PF00005 ABC transporter H1D55_RS00585 PF02321 Outer membrane efflux protein H1D55_RS00590 PF00664 ABC transporter transmembrane region H1D55_RS00590 PF03412 Peptidase C39 family H1D55_RS00590 PF00005 ABC transporter H1D55_RS00600 PF01205 Uncharacterized protein family UPF0029 H1D55_RS00605 PF00132 Bacterial transferase hexapeptide (six repeats) H1D55_RS00615 PF01596 O-methyltransferase H1D55_RS00625 PF00037 4Fe-4S binding domain H1D55_RS00625 PF11953 Domain of unknown function (DUF3470) H1D55_RS00635 PF00488 MutS domain V H1D55_RS00635 PF05190 MutS family domain IV H1D55_RS00635 PF05188 MutS domain II H1D55_RS00635 PF05192 MutS domain III H1D55_RS00635 PF01624 MutS domain I H1D55_RS00640 PF01037 Lrp/AsnC ligand binding domain H1D55_RS00645 PF00892 EamA-like transporter family H1D55_RS00650 PF03707 Bacterial signalling protein N terminal repeat H1D55_RS00650 PF00990 Diguanylate cyclase, GGDEF domain H1D55_RS00650 PF00563 EAL domain H1D55_RS00655 PF03279 Bacterial lipid A biosynthesis acyltransferase H1D55_RS00670 PF07690 Major Facilitator Superfamily H1D55_RS00690 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain H1D55_RS00690 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain H1D55_RS00710 PF13419 Haloacid dehalogenase-like hydrolase H1D55_RS00725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H1D55_RS00725 PF03466 LysR substrate binding domain H1D55_RS00730 PF01566 Natural resistance-associated macrophage protein H1D55_RS00735 PF03746 LamB/YcsF family H1D55_RS00740 PF07286 Protein of unknown function (DUF1445) H1D55_RS00750 PF00289 Biotin carboxylase, N-terminal domain H1D55_RS00750 PF00364 Biotin-requiring enzyme H1D55_RS00750 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain H1D55_RS00750 PF02785 Biotin carboxylase C-terminal domain H1D55_RS00755 PF00654 Voltage gated chloride channel H1D55_RS00760 PF17287 POTRA domain H1D55_RS00760 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB H1D55_RS00760 PF08479 POTRA domain, ShlB-type H1D55_RS00765 PF04829 Pre-toxin domain with VENN motif H1D55_RS00765 PF05860 haemagglutination activity domain H1D55_RS00765 PF13332 Hemagglutinin repeat H1D55_RS00765 PF13018 Extended Signal Peptide of Type V secretion system H1D55_RS00780 PF00440 Bacterial regulatory proteins, tetR family H1D55_RS00790 PF00107 Zinc-binding dehydrogenase H1D55_RS00790 PF13823 Alcohol dehydrogenase GroES-associated H1D55_RS00790 PF08240 Alcohol dehydrogenase GroES-like domain H1D55_RS00805 PF00289 Biotin carboxylase, N-terminal domain H1D55_RS00805 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain H1D55_RS00805 PF02785 Biotin carboxylase C-terminal domain H1D55_RS00810 PF02525 Flavodoxin-like fold H1D55_RS00815 PF01638 HxlR-like helix-turn-helix H1D55_RS00830 PF01402 Ribbon-helix-helix protein, copG family H1D55_RS00830 PF08753 NikR C terminal nickel binding domain H1D55_RS00835 PF01425 Amidase H1D55_RS00840 PF00497 Bacterial extracellular solute-binding proteins, family 3 H1D55_RS00845 PF00005 ABC transporter H1D55_RS00870 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath H1D55_RS00885 PF05947 Type VI secretion system, TssF H1D55_RS00900 PF06761 Intracellular multiplication and human macrophage-killing H1D55_RS00900 PF14331 ImcF-related N-terminal domain H1D55_RS00900 PF06744 Type VI secretion protein IcmF C-terminal H1D55_RS00910 PF01389 OmpA-like transmembrane domain H1D55_RS00910 PF00691 OmpA family H1D55_RS00925 PF07724 AAA domain (Cdc48 subfamily) H1D55_RS00925 PF17871 AAA lid domain H1D55_RS00925 PF10431 C-terminal, D2-small domain, of ClpB protein H1D55_RS00925 PF00004 ATPase family associated with various cellular activities (AAA) H1D55_RS00930 PF06812 ImpA, N-terminal, type VI secretion system H1D55_RS00935 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE H1D55_RS00955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H1D55_RS00955 PF03466 LysR substrate binding domain H1D55_RS00965 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region H1D55_RS00970 PF07690 Major Facilitator Superfamily H1D55_RS00985 PF02677 Epoxyqueuosine reductase QueH H1D55_RS00995 PF00376 MerR family regulatory protein H1D55_RS00995 PF09278 MerR, DNA binding H1D55_RS01005 PF00701 Dihydrodipicolinate synthetase family H1D55_RS01015 PF00392 Bacterial regulatory proteins, gntR family H1D55_RS01020 PF05544 Proline racemase H1D55_RS01025 PF01266 FAD dependent oxidoreductase H1D55_RS01025 PF01266 FAD dependent oxidoreductase H1D55_RS01035 PF07992 Pyridine nucleotide-disulphide oxidoreductase H1D55_RS01035 PF04324 BFD-like [2Fe-2S] binding domain H1D55_RS01045 PF00083 Sugar (and other) transporter H1D55_RS01050 PF00171 Aldehyde dehydrogenase family H1D55_RS01055 PF13520 Amino acid permease H1D55_RS01060 PF03315 Serine dehydratase beta chain H1D55_RS01060 PF03313 Serine dehydratase alpha chain H1D55_RS01065 PF01575 MaoC like domain H1D55_RS01065 PF00171 Aldehyde dehydrogenase family H1D55_RS01070 PF05138 Phenylacetic acid catabolic protein H1D55_RS01075 PF06243 Phenylacetic acid degradation B H1D55_RS01080 PF05138 Phenylacetic acid catabolic protein H1D55_RS01085 PF01883 Iron-sulfur cluster assembly protein H1D55_RS01090 PF00175 Oxidoreductase NAD-binding domain H1D55_RS01090 PF00970 Oxidoreductase FAD-binding domain H1D55_RS01090 PF00111 2Fe-2S iron-sulfur cluster binding domain H1D55_RS01095 PF00378 Enoyl-CoA hydratase/isomerase H1D55_RS01100 PF00378 Enoyl-CoA hydratase/isomerase H1D55_RS01105 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain H1D55_RS01105 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain H1D55_RS01105 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain H1D55_RS01110 PF00108 Thiolase, N-terminal domain H1D55_RS01110 PF02803 Thiolase, C-terminal domain H1D55_RS01115 PF00501 AMP-binding enzyme H1D55_RS01115 PF14535 AMP-binding enzyme C-terminal domain H1D55_RS01120 PF07848 PaaX-like protein H1D55_RS01120 PF08223 PaaX-like protein C-terminal domain H1D55_RS01125 PF00132 Bacterial transferase hexapeptide (six repeats) H1D55_RS01130 PF03061 Thioesterase superfamily H1D55_RS01135 PF13195 Protein of unknown function (DUF4011) H1D55_RS01135 PF13087 AAA domain H1D55_RS01135 PF13087 AAA domain H1D55_RS01135 PF13086 AAA domain H1D55_RS01135 PF13195 Protein of unknown function (DUF4011) H1D55_RS01135 PF13086 AAA domain H1D55_RS01180 PF12833 Helix-turn-helix domain H1D55_RS01180 PF06719 AraC-type transcriptional regulator N-terminus H1D55_RS01195 PF02515 CoA-transferase family III H1D55_RS01200 PF00682 HMGL-like H1D55_RS01205 PF07690 Major Facilitator Superfamily H1D55_RS01210 PF00199 Catalase H1D55_RS01215 PF01292 Prokaryotic cytochrome b561 H1D55_RS01235 PF12697 Alpha/beta hydrolase family H1D55_RS01240 PF01613 Flavin reductase like domain H1D55_RS01245 PF00296 Luciferase-like monooxygenase H1D55_RS01250 PF00171 Aldehyde dehydrogenase family H1D55_RS01260 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin H1D55_RS01270 PF00171 Aldehyde dehydrogenase family H1D55_RS01275 PF02627 Carboxymuconolactone decarboxylase family H1D55_RS01280 PF03466 LysR substrate binding domain H1D55_RS01280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H1D55_RS01285 PF02525 Flavodoxin-like fold H1D55_RS01290 PF09339 IclR helix-turn-helix domain H1D55_RS01290 PF01614 Bacterial transcriptional regulator H1D55_RS01295 PF01494 FAD binding domain H1D55_RS01300 PF07702 UTRA domain H1D55_RS01300 PF00392 Bacterial regulatory proteins, gntR family H1D55_RS01310 PF00005 ABC transporter H1D55_RS01310 PF08402 TOBE domain H1D55_RS01315 PF00528 Binding-protein-dependent transport system inner membrane component H1D55_RS01320 PF01266 FAD dependent oxidoreductase H1D55_RS01325 PF00266 Aminotransferase class-V H1D55_RS01330 PF13419 Haloacid dehalogenase-like hydrolase H1D55_RS01335 PF07690 Major Facilitator Superfamily H1D55_RS01340 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H1D55_RS01340 PF02770 Acyl-CoA dehydrogenase, middle domain H1D55_RS01340 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H1D55_RS01345 PF02515 CoA-transferase family III H1D55_RS01350 PF09339 IclR helix-turn-helix domain H1D55_RS01355 PF00378 Enoyl-CoA hydratase/isomerase H1D55_RS01360 PF03060 Nitronate monooxygenase H1D55_RS01365 PF07690 Major Facilitator Superfamily H1D55_RS01370 PF09339 IclR helix-turn-helix domain H1D55_RS01375 PF02803 Thiolase, C-terminal domain H1D55_RS01375 PF00108 Thiolase, N-terminal domain H1D55_RS01380 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain H1D55_RS01380 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain H1D55_RS01380 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain H1D55_RS01390 PF00378 Enoyl-CoA hydratase/isomerase H1D55_RS01395 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H1D55_RS01395 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H1D55_RS01395 PF02770 Acyl-CoA dehydrogenase, middle domain H1D55_RS01400 PF07690 Major Facilitator Superfamily H1D55_RS01405 PF01144 Coenzyme A transferase H1D55_RS01410 PF01144 Coenzyme A transferase H1D55_RS01420 PF07690 Major Facilitator Superfamily H1D55_RS01430 PF02770 Acyl-CoA dehydrogenase, middle domain H1D55_RS01430 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H1D55_RS01430 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H1D55_RS01430 PF12806 Acetyl-CoA dehydrogenase C-terminal like H1D55_RS01445 PF03466 LysR substrate binding domain H1D55_RS01445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H1D55_RS01450 PF00682 HMGL-like H1D55_RS01455 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain H1D55_RS01455 PF18140 Propionyl-coenzyme A carboxylase BT domain H1D55_RS01455 PF02785 Biotin carboxylase C-terminal domain H1D55_RS01455 PF00289 Biotin carboxylase, N-terminal domain H1D55_RS01455 PF00364 Biotin-requiring enzyme H1D55_RS01460 PF00378 Enoyl-CoA hydratase/isomerase H1D55_RS01465 PF01039 Carboxyl transferase domain H1D55_RS01470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H1D55_RS01470 PF02770 Acyl-CoA dehydrogenase, middle domain H1D55_RS01470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H1D55_RS01475 PF00440 Bacterial regulatory proteins, tetR family H1D55_RS01480 PF13193 AMP-binding enzyme C-terminal domain H1D55_RS01480 PF00501 AMP-binding enzyme H1D55_RS01500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H1D55_RS01500 PF03466 LysR substrate binding domain H1D55_RS01535 PF00994 Probable molybdopterin binding domain H1D55_RS01535 PF18146 Damage-inducible protein CinA KH domain H1D55_RS01535 PF02464 Competence-damaged protein H1D55_RS01545 PF06628 Catalase-related immune-responsive H1D55_RS01545 PF18011 C-terminal domain found in long catalases H1D55_RS01545 PF00199 Catalase H1D55_RS01575 PF00717 Peptidase S24-like H1D55_RS01585 PF01037 Lrp/AsnC ligand binding domain H1D55_RS01585 PF13404 AsnC-type helix-turn-helix domain H1D55_RS01595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H1D55_RS01595 PF00072 Response regulator receiver domain H1D55_RS01595 PF00512 His Kinase A (phospho-acceptor) domain H1D55_RS01595 PF09308 LuxQ, periplasmic H1D55_RS01600 PF00072 Response regulator receiver domain H1D55_RS01615 PF00528 Binding-protein-dependent transport system inner membrane component H1D55_RS01620 PF00528 Binding-protein-dependent transport system inner membrane component H1D55_RS01625 PF00005 ABC transporter H1D55_RS01630 PF00497 Bacterial extracellular solute-binding proteins, family 3 H1D55_RS01645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H1D55_RS01645 PF03466 LysR substrate binding domain H1D55_RS01650 PF01810 LysE type translocator H1D55_RS01655 PF00266 Aminotransferase class-V H1D55_RS01665 PF00132 Bacterial transferase hexapeptide (six repeats) H1D55_RS01670 PF00581 Rhodanese-like domain H1D55_RS01680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H1D55_RS01680 PF03466 LysR substrate binding domain H1D55_RS01685 PF02798 Glutathione S-transferase, N-terminal domain H1D55_RS01690 PF14834 Glutathione S-transferase, C-terminal domain H1D55_RS01690 PF02798 Glutathione S-transferase, N-terminal domain H1D55_RS01695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H1D55_RS01695 PF03466 LysR substrate binding domain H1D55_RS01700 PF03788 LrgA family H1D55_RS01705 PF04172 LrgB-like family H1D55_RS01710 PF00392 Bacterial regulatory proteins, gntR family H1D55_RS01710 PF00155 Aminotransferase class I and II H1D55_RS01725 PF07690 Major Facilitator Superfamily H1D55_RS01735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H1D55_RS01735 PF03466 LysR substrate binding domain H1D55_RS01740 PF16957 Malonate decarboxylase, alpha subunit, transporter H1D55_RS01750 PF06857 Malonate decarboxylase delta subunit (MdcD) H1D55_RS01755 PF01039 Carboxyl transferase domain H1D55_RS01765 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG H1D55_RS01770 PF00698 Acyl transferase domain H1D55_RS01785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H1D55_RS01785 PF03466 LysR substrate binding domain H1D55_RS01790 PF00392 Bacterial regulatory proteins, gntR family H1D55_RS01790 PF00155 Aminotransferase class I and II H1D55_RS01800 PF02322 Cytochrome bd terminal oxidase subunit II H1D55_RS01805 PF01654 Cytochrome bd terminal oxidase subunit I H1D55_RS01820 PF00296 Luciferase-like monooxygenase H1D55_RS01835 PF04069 Substrate binding domain of ABC-type glycine betaine transport system H1D55_RS01840 PF00005 ABC transporter H1D55_RS01845 PF00528 Binding-protein-dependent transport system inner membrane component H1D55_RS01850 PF02668 Taurine catabolism dioxygenase TauD, TfdA family H1D55_RS01855 PF01177 Asp/Glu/Hydantoin racemase H1D55_RS01860 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin H1D55_RS01870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H1D55_RS01870 PF03466 LysR substrate binding domain H1D55_RS01880 PF13382 Adenine deaminase C-terminal domain H1D55_RS01880 PF01979 Amidohydrolase family H1D55_RS01890 PF03960 ArsC family H1D55_RS01895 PF01022 Bacterial regulatory protein, arsR family H1D55_RS01900 PF01758 Sodium Bile acid symporter family H1D55_RS01905 PF03466 LysR substrate binding domain H1D55_RS01905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H1D55_RS01920 PF13192 Thioredoxin domain H1D55_RS01920 PF07992 Pyridine nucleotide-disulphide oxidoreductase H1D55_RS01935 PF00132 Bacterial transferase hexapeptide (six repeats) H1D55_RS01940 PF00588 SpoU rRNA Methylase family H1D55_RS01945 PF07733 Bacterial DNA polymerase III alpha NTPase domain H1D55_RS01945 PF17657 Bacterial DNA polymerase III alpha subunit finger domain H1D55_RS01945 PF14579 Helix-hairpin-helix motif H1D55_RS01945 PF02811 PHP domain H1D55_RS01945 PF01336 OB-fold nucleic acid binding domain H1D55_RS01950 PF17763 Glutaminase/Asparaginase C-terminal domain H1D55_RS01950 PF00710 Asparaginase, N-terminal H1D55_RS01955 PF00375 Sodium:dicarboxylate symporter family H1D55_RS01960 PF00155 Aminotransferase class I and II H1D55_RS01965 PF01641 SelR domain H1D55_RS01970 PF00255 Glutathione peroxidase H1D55_RS01975 PF12833 Helix-turn-helix domain H1D55_RS01975 PF12852 Cupin H1D55_RS01985 PF00155 Aminotransferase class I and II H1D55_RS01990 PF01909 Nucleotidyltransferase domain H1D55_RS01990 PF01966 HD domain H1D55_RS01990 PF08335 GlnD PII-uridylyltransferase H1D55_RS01995 PF02222 ATP-grasp domain H1D55_RS02005 PF05437 Branched-chain amino acid transport protein (AzlD) H1D55_RS02010 PF03591 AzlC protein H1D55_RS02035 PF06071 Protein of unknown function (DUF933) H1D55_RS02035 PF01926 50S ribosome-binding GTPase H1D55_RS02040 PF00528 Binding-protein-dependent transport system inner membrane component H1D55_RS02045 PF09383 NIL domain H1D55_RS02045 PF00005 ABC transporter H1D55_RS02050 PF03180 NLPA lipoprotein H1D55_RS02055 PF03180 NLPA lipoprotein H1D55_RS02060 PF00296 Luciferase-like monooxygenase H1D55_RS02070 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H1D55_RS02070 PF08028 Acyl-CoA dehydrogenase, C-terminal domain H1D55_RS02085 PF00528 Binding-protein-dependent transport system inner membrane component H1D55_RS02090 PF00528 Binding-protein-dependent transport system inner membrane component H1D55_RS02095 PF00005 ABC transporter H1D55_RS02105 PF01037 Lrp/AsnC ligand binding domain H1D55_RS02110 PF01709 Transcriptional regulator H1D55_RS02120 PF00440 Bacterial regulatory proteins, tetR family H1D55_RS02140 PF03466 LysR substrate binding domain H1D55_RS02140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H1D55_RS02150 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin H1D55_RS02160 PF00892 EamA-like transporter family H1D55_RS02180 PF13954 PapC N-terminal domain H1D55_RS02180 PF13953 PapC C-terminal domain H1D55_RS02180 PF00577 Outer membrane usher protein H1D55_RS02185 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain H1D55_RS02185 PF02753 Pili assembly chaperone PapD, C-terminal domain H1D55_RS02190 PF16970 Type-1 fimbrial protein, A H1D55_RS02205 PF06968 Biotin and Thiamin Synthesis associated domain H1D55_RS02205 PF04055 Radical SAM superfamily H1D55_RS02210 PF08331 Domain of unknown function (DUF1730) H1D55_RS02215 PF03853 YjeF-related protein N-terminus H1D55_RS02215 PF01256 Carbohydrate kinase H1D55_RS02220 PF02075 Crossover junction endodeoxyribonuclease RuvC H1D55_RS02235 PF00905 Penicillin binding protein transpeptidase domain H1D55_RS02255 PF02772 S-adenosylmethionine synthetase, central domain H1D55_RS02255 PF00438 S-adenosylmethionine synthetase, N-terminal domain H1D55_RS02255 PF02773 S-adenosylmethionine synthetase, C-terminal domain H1D55_RS02260 PF02779 Transketolase, pyrimidine binding domain H1D55_RS02260 PF02780 Transketolase, C-terminal domain H1D55_RS02260 PF00456 Transketolase, thiamine diphosphate binding domain H1D55_RS02270 PF04264 YceI-like domain H1D55_RS02280 PF09992 Phosphodiester glycosidase H1D55_RS02290 PF05958 tRNA (Uracil-5-)-methyltransferase H1D55_RS02300 PF14850 DNA-binding domain of Proline dehydrogenase H1D55_RS02300 PF18327 Proline utilization A proline dehydrogenase N-terminal domain H1D55_RS02300 PF00171 Aldehyde dehydrogenase family H1D55_RS02300 PF01619 Proline dehydrogenase H1D55_RS02305 PF01037 Lrp/AsnC ligand binding domain H1D55_RS02310 PF00474 Sodium:solute symporter family H1D55_RS02315 PF02146 Sir2 family H1D55_RS02320 PF01597 Glycine cleavage H-protein H1D55_RS02325 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term H1D55_RS02325 PF12833 Helix-turn-helix domain H1D55_RS02335 PF00005 ABC transporter H1D55_RS02335 PF00664 ABC transporter transmembrane region H1D55_RS02340 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) H1D55_RS02345 PF06912 Protein of unknown function (DUF1275) H1D55_RS02350 PF00375 Sodium:dicarboxylate symporter family H1D55_RS02365 PF08007 Cupin superfamily protein H1D55_RS02370 PF02545 Maf-like protein H1D55_RS02380 PF00162 Phosphoglycerate kinase H1D55_RS02390 PF01116 Fructose-bisphosphate aldolase class-II H1D55_RS02395 PF09312 SurA N-terminal domain H1D55_RS02395 PF00639 PPIC-type PPIASE domain H1D55_RS02400 PF04453 LPS transport system D H1D55_RS02400 PF03968 OstA-like protein H1D55_RS02405 PF01636 Phosphotransferase enzyme family H1D55_RS02410 PF00483 Nucleotidyl transferase H1D55_RS02415 PF02527 rRNA small subunit methyltransferase G H1D55_RS02420 PF13614 AAA domain H1D55_RS02425 PF17762 HTH domain found in ParB protein H1D55_RS02425 PF02195 ParB-like nuclease domain H1D55_RS02430 PF01618 MotA/TolQ/ExbB proton channel family H1D55_RS02440 PF00664 ABC transporter transmembrane region H1D55_RS02440 PF00005 ABC transporter H1D55_RS02445 PF02606 Tetraacyldisaccharide-1-P 4'-kinase H1D55_RS02450 PF02348 Cytidylyltransferase H1D55_RS02455 PF09115 DNA polymerase III, delta subunit, C terminal H1D55_RS02465 PF01026 TatD related DNase H1D55_RS02480 PF07963 Prokaryotic N-terminal methylation motif H1D55_RS02480 PF02501 Type II secretion system (T2SS), protein I H1D55_RS02485 PF11612 Type II secretion system (T2SS), protein J H1D55_RS02485 PF07963 Prokaryotic N-terminal methylation motif H1D55_RS02490 PF03934 Type II secretion system (T2SS), protein K H1D55_RS02500 PF03167 Uracil DNA glycosylase superfamily H1D55_RS02510 PF14437 MafB19-like deaminase H1D55_RS02520 PF02224 Cytidylate kinase H1D55_RS02525 PF00575 S1 RNA binding domain H1D55_RS02530 PF00216 Bacterial DNA-binding protein H1D55_RS02540 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family H1D55_RS02550 PF00743 Flavin-binding monooxygenase-like H1D55_RS02560 PF03969 AFG1-like ATPase H1D55_RS02565 PF01274 Malate synthase H1D55_RS02575 PF02472 Biopolymer transport protein ExbD/TolR H1D55_RS02580 PF02472 Biopolymer transport protein ExbD/TolR H1D55_RS02585 PF01618 MotA/TolQ/ExbB proton channel family H1D55_RS02595 PF07715 TonB-dependent Receptor Plug Domain H1D55_RS02595 PF00593 TonB dependent receptor H1D55_RS02615 PF01432 Peptidase family M3 H1D55_RS02620 PF00528 Binding-protein-dependent transport system inner membrane component H1D55_RS02625 PF00528 Binding-protein-dependent transport system inner membrane component H1D55_RS02630 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H1D55_RS02630 PF00005 ABC transporter H1D55_RS02645 PF00459 Inositol monophosphatase family H1D55_RS02655 PF01649 Ribosomal protein S20 H1D55_RS02660 PF13460 NAD(P)H-binding H1D55_RS02665 PF03737 Aldolase/RraA H1D55_RS02685 PF17757 UvrB interaction domain H1D55_RS02685 PF00270 DEAD/DEAH box helicase H1D55_RS02685 PF00271 Helicase conserved C-terminal domain H1D55_RS02685 PF03461 TRCF domain H1D55_RS02685 PF02559 CarD-like/TRCF domain H1D55_RS02695 PF00211 Adenylate and Guanylate cyclase catalytic domain H1D55_RS02700 PF00111 2Fe-2S iron-sulfur cluster binding domain H1D55_RS02705 PF00012 Hsp70 protein H1D55_RS02710 PF00226 DnaJ domain H1D55_RS02710 PF07743 HSCB C-terminal oligomerisation domain H1D55_RS02715 PF01521 Iron-sulphur cluster biosynthesis H1D55_RS02720 PF01592 NifU-like N terminal domain H1D55_RS02725 PF00266 Aminotransferase class-V H1D55_RS02730 PF02082 Transcriptional regulator H1D55_RS02745 PF00216 Bacterial DNA-binding protein H1D55_RS02750 PF00639 PPIC-type PPIASE domain H1D55_RS02750 PF09312 SurA N-terminal domain H1D55_RS02755 PF12852 Cupin H1D55_RS02755 PF12833 Helix-turn-helix domain H1D55_RS02760 PF00487 Fatty acid desaturase H1D55_RS02765 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H1D55_RS02765 PF02770 Acyl-CoA dehydrogenase, middle domain H1D55_RS02765 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H1D55_RS02770 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H1D55_RS02770 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H1D55_RS02770 PF02770 Acyl-CoA dehydrogenase, middle domain H1D55_RS02775 PF03109 ABC1 family H1D55_RS02785 PF04073 Aminoacyl-tRNA editing domain H1D55_RS02790 PF04183 IucA / IucC family H1D55_RS02790 PF06276 Ferric iron reductase FhuF-like transporter H1D55_RS02795 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) H1D55_RS02800 PF07690 Major Facilitator Superfamily H1D55_RS02805 PF04183 IucA / IucC family H1D55_RS02805 PF06276 Ferric iron reductase FhuF-like transporter H1D55_RS02810 PF04183 IucA / IucC family H1D55_RS02810 PF06276 Ferric iron reductase FhuF-like transporter H1D55_RS02820 PF03737 Aldolase/RraA H1D55_RS02825 PF07715 TonB-dependent Receptor Plug Domain H1D55_RS02825 PF00593 TonB dependent receptor H1D55_RS02850 PF13419 Haloacid dehalogenase-like hydrolase H1D55_RS02860 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase H1D55_RS02865 PF02277 Phosphoribosyltransferase H1D55_RS02870 PF00300 Histidine phosphatase superfamily (branch 1) H1D55_RS02880 PF02654 Cobalamin-5-phosphate synthase H1D55_RS02885 PF00793 DAHP synthetase I family H1D55_RS02890 PF01925 Sulfite exporter TauE/SafE H1D55_RS02910 PF07715 TonB-dependent Receptor Plug Domain H1D55_RS02910 PF00593 TonB dependent receptor H1D55_RS02915 PF02684 Lipid-A-disaccharide synthetase H1D55_RS02925 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H1D55_RS02930 PF00005 ABC transporter H1D55_RS02965 PF01230 HIT domain H1D55_RS02995 PF08241 Methyltransferase domain H1D55_RS03000 PF00561 alpha/beta hydrolase fold H1D55_RS03005 PF01053 Cys/Met metabolism PLP-dependent enzyme H1D55_RS03015 PF02575 YbaB/EbfC DNA-binding family H1D55_RS03020 PF13662 Toprim domain H1D55_RS03020 PF02132 RecR protein H1D55_RS03025 PF01612 3'-5' exonuclease H1D55_RS03025 PF00570 HRDC domain H1D55_RS03045 PF05166 YcgL domain H1D55_RS03055 PF00004 ATPase family associated with various cellular activities (AAA) H1D55_RS03055 PF17862 AAA+ lid domain H1D55_RS03055 PF01434 Peptidase family M41 H1D55_RS03065 PF00291 Pyridoxal-phosphate dependent enzyme H1D55_RS03070 PF05175 Methyltransferase small domain H1D55_RS03075 PF01264 Chorismate synthase H1D55_RS03080 PF08448 PAS fold H1D55_RS03080 PF00990 Diguanylate cyclase, GGDEF domain H1D55_RS03095 PF04055 Radical SAM superfamily H1D55_RS03100 PF00676 Dehydrogenase E1 component H1D55_RS03105 PF02779 Transketolase, pyrimidine binding domain H1D55_RS03105 PF02780 Transketolase, C-terminal domain H1D55_RS03110 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) H1D55_RS03110 PF02817 e3 binding domain H1D55_RS03110 PF00364 Biotin-requiring enzyme H1D55_RS03115 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H1D55_RS03115 PF07992 Pyridine nucleotide-disulphide oxidoreductase H1D55_RS03120 PF00106 short chain dehydrogenase H1D55_RS03125 PF00107 Zinc-binding dehydrogenase H1D55_RS03125 PF08240 Alcohol dehydrogenase GroES-like domain H1D55_RS03130 PF01062 Bestrophin, RFP-TM, chloride channel H1D55_RS03135 PF00072 Response regulator receiver domain H1D55_RS03135 PF00158 Sigma-54 interaction domain H1D55_RS03135 PF02954 Bacterial regulatory protein, Fis family H1D55_RS03140 PF04273 Putative phosphatase (DUF442) H1D55_RS03140 PF00753 Metallo-beta-lactamase superfamily H1D55_RS03155 PF01925 Sulfite exporter TauE/SafE H1D55_RS03170 PF12833 Helix-turn-helix domain H1D55_RS03170 PF06445 GyrI-like small molecule binding domain H1D55_RS03175 PF01638 HxlR-like helix-turn-helix H1D55_RS03180 PF02525 Flavodoxin-like fold H1D55_RS03190 PF00392 Bacterial regulatory proteins, gntR family H1D55_RS03190 PF07702 UTRA domain H1D55_RS03205 PF04069 Substrate binding domain of ABC-type glycine betaine transport system H1D55_RS03210 PF00528 Binding-protein-dependent transport system inner membrane component H1D55_RS03215 PF00005 ABC transporter H1D55_RS03230 PF00083 Sugar (and other) transporter H1D55_RS03235 PF07715 TonB-dependent Receptor Plug Domain H1D55_RS03235 PF00593 TonB dependent receptor H1D55_RS03240 PF10415 Fumarase C C-terminus H1D55_RS03240 PF00206 Lyase H1D55_RS03255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H1D55_RS03255 PF03466 LysR substrate binding domain H1D55_RS03260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H1D55_RS03260 PF03466 LysR substrate binding domain H1D55_RS03265 PF02803 Thiolase, C-terminal domain H1D55_RS03265 PF00108 Thiolase, N-terminal domain H1D55_RS03270 PF02667 Short chain fatty acid transporter H1D55_RS03275 PF01144 Coenzyme A transferase H1D55_RS03280 PF01144 Coenzyme A transferase H1D55_RS03285 PF03466 LysR substrate binding domain H1D55_RS03285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H1D55_RS03305 PF00440 Bacterial regulatory proteins, tetR family H1D55_RS03325 PF12833 Helix-turn-helix domain H1D55_RS03325 PF06719 AraC-type transcriptional regulator N-terminus H1D55_RS03330 PF07690 Major Facilitator Superfamily H1D55_RS03335 PF01738 Dienelactone hydrolase family H1D55_RS03350 PF01613 Flavin reductase like domain H1D55_RS03360 PF14525 AraC-binding-like domain H1D55_RS03360 PF12833 Helix-turn-helix domain H1D55_RS03365 PF00970 Oxidoreductase FAD-binding domain H1D55_RS03365 PF00111 2Fe-2S iron-sulfur cluster binding domain H1D55_RS03365 PF00175 Oxidoreductase NAD-binding domain H1D55_RS03370 PF00866 Ring hydroxylating beta subunit H1D55_RS03375 PF00848 Ring hydroxylating alpha subunit (catalytic domain) H1D55_RS03375 PF00355 Rieske [2Fe-2S] domain H1D55_RS03380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H1D55_RS03380 PF03459 TOBE domain H1D55_RS03390 PF00528 Binding-protein-dependent transport system inner membrane component H1D55_RS03395 PF00005 ABC transporter H1D55_RS03395 PF03459 TOBE domain H1D55_RS03400 PF00106 short chain dehydrogenase H1D55_RS03405 PF00857 Isochorismatase family H1D55_RS03405 PF00550 Phosphopantetheine attachment site H1D55_RS03415 PF00149 Calcineurin-like phosphoesterase H1D55_RS03420 PF02503 Polyphosphate kinase middle domain H1D55_RS03420 PF13089 Polyphosphate kinase N-terminal domain H1D55_RS03420 PF17941 Polyphosphate kinase C-terminal domain 1 H1D55_RS03420 PF13090 Polyphosphate kinase C-terminal domain 2 H1D55_RS03425 PF08042 PqqA family H1D55_RS03430 PF12706 Beta-lactamase superfamily domain H1D55_RS03435 PF03070 TENA/THI-4/PQQC family H1D55_RS03440 PF05402 Coenzyme PQQ synthesis protein D (PqqD) H1D55_RS03445 PF13186 Iron-sulfur cluster-binding domain H1D55_RS03445 PF04055 Radical SAM superfamily H1D55_RS03450 PF01244 Membrane dipeptidase (Peptidase family M19) H1D55_RS03465 PF13091 PLD-like domain H1D55_RS03480 PF00199 Catalase H1D55_RS03490 PF08240 Alcohol dehydrogenase GroES-like domain H1D55_RS03490 PF00107 Zinc-binding dehydrogenase H1D55_RS03505 PF00577 Outer membrane usher protein H1D55_RS03505 PF13954 PapC N-terminal domain H1D55_RS03505 PF13953 PapC C-terminal domain H1D55_RS03510 PF02753 Pili assembly chaperone PapD, C-terminal domain H1D55_RS03510 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain H1D55_RS03515 PF16970 Type-1 fimbrial protein, A H1D55_RS03595 PF17760 UvrA interaction domain H1D55_RS03595 PF17755 UvrA DNA-binding domain H1D55_RS03595 PF00005 ABC transporter H1D55_RS03600 PF00873 AcrB/AcrD/AcrF family H1D55_RS03605 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H1D55_RS03605 PF00529 HlyD membrane-fusion protein of T1SS H1D55_RS03610 PF00486 Transcriptional regulatory protein, C terminal H1D55_RS03610 PF00072 Response regulator receiver domain H1D55_RS03615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H1D55_RS03615 PF00512 His Kinase A (phospho-acceptor) domain H1D55_RS03615 PF00672 HAMP domain H1D55_RS03625 PF02311 AraC-like ligand binding domain H1D55_RS03625 PF12833 Helix-turn-helix domain H1D55_RS03630 PF12146 Serine aminopeptidase, S33 H1D55_RS03655 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family H1D55_RS03670 PF13673 Acetyltransferase (GNAT) domain H1D55_RS03695 PF13291 ACT domain H1D55_RS03695 PF04607 Region found in RelA / SpoT proteins H1D55_RS03695 PF02824 TGS domain H1D55_RS03705 PF01975 Survival protein SurE H1D55_RS03730 PF07690 Major Facilitator Superfamily H1D55_RS03735 PF13533 Biotin-lipoyl like H1D55_RS03760 PF03852 DNA mismatch endonuclease Vsr H1D55_RS03765 PF00145 C-5 cytosine-specific DNA methylase H1D55_RS03765 PF01381 Helix-turn-helix H1D55_RS03770 PF07728 AAA domain (dynein-related subfamily) H1D55_RS03810 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family H1D55_RS03815 PF14572 Phosphoribosyl synthetase-associated domain H1D55_RS03815 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase H1D55_RS03835 PF00005 ABC transporter H1D55_RS03840 PF01032 FecCD transport family H1D55_RS03850 PF00107 Zinc-binding dehydrogenase H1D55_RS03850 PF08240 Alcohol dehydrogenase GroES-like domain H1D55_RS03865 PF12833 Helix-turn-helix domain H1D55_RS03865 PF06719 AraC-type transcriptional regulator N-terminus H1D55_RS03870 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase H1D55_RS03870 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase H1D55_RS03875 PF07690 Major Facilitator Superfamily H1D55_RS03880 PF01370 NAD dependent epimerase/dehydratase family H1D55_RS03885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H1D55_RS03885 PF03466 LysR substrate binding domain H1D55_RS03895 PF00920 Dehydratase family H1D55_RS03900 PF00171 Aldehyde dehydrogenase family H1D55_RS03915 PF00529 HlyD membrane-fusion protein of T1SS H1D55_RS03915 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H1D55_RS03930 PF03466 LysR substrate binding domain H1D55_RS03930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H1D55_RS03940 PF08450 SMP-30/Gluconolactonase/LRE-like region H1D55_RS03945 PF07702 UTRA domain H1D55_RS03945 PF00392 Bacterial regulatory proteins, gntR family H1D55_RS03955 PF04909 Amidohydrolase H1D55_RS03960 PF07690 Major Facilitator Superfamily H1D55_RS03980 PF13332 Hemagglutinin repeat H1D55_RS03980 PF05860 haemagglutination activity domain H1D55_RS03980 PF13018 Extended Signal Peptide of Type V secretion system H1D55_RS03980 PF04829 Pre-toxin domain with VENN motif H1D55_RS03985 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB H1D55_RS03985 PF17287 POTRA domain H1D55_RS03985 PF08479 POTRA domain, ShlB-type H1D55_RS04000 PF00501 AMP-binding enzyme H1D55_RS04000 PF13193 AMP-binding enzyme C-terminal domain H1D55_RS04010 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H1D55_RS04010 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H1D55_RS04010 PF12806 Acetyl-CoA dehydrogenase C-terminal like H1D55_RS04010 PF02770 Acyl-CoA dehydrogenase, middle domain H1D55_RS04015 PF01575 MaoC like domain H1D55_RS04020 PF00106 short chain dehydrogenase H1D55_RS04035 PF03466 LysR substrate binding domain H1D55_RS04035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H1D55_RS04040 PF08359 YsiA-like protein, C-terminal region H1D55_RS04040 PF00440 Bacterial regulatory proteins, tetR family H1D55_RS04045 PF12706 Beta-lactamase superfamily domain H1D55_RS04055 PF07992 Pyridine nucleotide-disulphide oxidoreductase H1D55_RS04065 PF09278 MerR, DNA binding H1D55_RS04065 PF00376 MerR family regulatory protein H1D55_RS04080 PF00724 NADH:flavin oxidoreductase / NADH oxidase family H1D55_RS04080 PF07992 Pyridine nucleotide-disulphide oxidoreductase H1D55_RS04085 PF00561 alpha/beta hydrolase fold H1D55_RS04095 PF00171 Aldehyde dehydrogenase family H1D55_RS04105 PF07690 Major Facilitator Superfamily H1D55_RS04110 PF00920 Dehydratase family H1D55_RS04115 PF00392 Bacterial regulatory proteins, gntR family H1D55_RS04115 PF07729 FCD domain H1D55_RS04125 PF03466 LysR substrate binding domain H1D55_RS04125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H1D55_RS04130 PF13378 Enolase C-terminal domain-like H1D55_RS04130 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain H1D55_RS04135 PF02426 Muconolactone delta-isomerase H1D55_RS04140 PF04444 Catechol dioxygenase N terminus H1D55_RS04140 PF00775 Dioxygenase H1D55_RS04145 PF01144 Coenzyme A transferase H1D55_RS04150 PF01144 Coenzyme A transferase H1D55_RS04155 PF00108 Thiolase, N-terminal domain H1D55_RS04155 PF02803 Thiolase, C-terminal domain H1D55_RS04160 PF12146 Serine aminopeptidase, S33 H1D55_RS04165 PF01804 Penicillin amidase H1D55_RS04170 PF00171 Aldehyde dehydrogenase family H1D55_RS04180 PF01179 Copper amine oxidase, enzyme domain H1D55_RS04180 PF02728 Copper amine oxidase, N3 domain H1D55_RS04180 PF02727 Copper amine oxidase, N2 domain H1D55_RS04180 PF07833 Copper amine oxidase N-terminal domain H1D55_RS04185 PF02311 AraC-like ligand binding domain H1D55_RS04185 PF12833 Helix-turn-helix domain H1D55_RS04190 PF01613 Flavin reductase like domain H1D55_RS04195 PF00111 2Fe-2S iron-sulfur cluster binding domain H1D55_RS04195 PF00175 Oxidoreductase NAD-binding domain H1D55_RS04210 PF00848 Ring hydroxylating alpha subunit (catalytic domain) H1D55_RS04210 PF00355 Rieske [2Fe-2S] domain H1D55_RS04225 PF08028 Acyl-CoA dehydrogenase, C-terminal domain H1D55_RS04230 PF01425 Amidase H1D55_RS04240 PF07690 Major Facilitator Superfamily H1D55_RS04250 PF00106 short chain dehydrogenase H1D55_RS04265 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H1D55_RS04265 PF02770 Acyl-CoA dehydrogenase, middle domain H1D55_RS04265 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H1D55_RS04270 PF03466 LysR substrate binding domain H1D55_RS04270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H1D55_RS04275 PF09339 IclR helix-turn-helix domain H1D55_RS04275 PF01614 Bacterial transcriptional regulator H1D55_RS04280 PF00753 Metallo-beta-lactamase superfamily H1D55_RS04290 PF04143 Sulphur transport H1D55_RS04300 PF13360 PQQ-like domain H1D55_RS04300 PF01011 PQQ enzyme repeat H1D55_RS04305 PF04966 Carbohydrate-selective porin, OprB family H1D55_RS04310 PF05048 Periplasmic copper-binding protein (NosD) H1D55_RS04315 PF01487 Type I 3-dehydroquinase H1D55_RS04320 PF00775 Dioxygenase H1D55_RS04325 PF00775 Dioxygenase H1D55_RS04325 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal H1D55_RS04330 PF02627 Carboxymuconolactone decarboxylase family H1D55_RS04335 PF07690 Major Facilitator Superfamily H1D55_RS04340 PF00561 alpha/beta hydrolase fold H1D55_RS04345 PF10397 Adenylosuccinate lyase C-terminus H1D55_RS04345 PF00206 Lyase H1D55_RS04350 PF00108 Thiolase, N-terminal domain H1D55_RS04350 PF02803 Thiolase, C-terminal domain H1D55_RS04355 PF01144 Coenzyme A transferase H1D55_RS04360 PF01144 Coenzyme A transferase H1D55_RS04365 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase H1D55_RS04370 PF04977 Septum formation initiator H1D55_RS04375 PF04239 Protein of unknown function (DUF421) H1D55_RS04380 PF00113 Enolase, C-terminal TIM barrel domain H1D55_RS04380 PF03952 Enolase, N-terminal domain H1D55_RS04385 PF00793 DAHP synthetase I family H1D55_RS04390 PF00117 Glutamine amidotransferase class-I H1D55_RS04390 PF06418 CTP synthase N-terminus H1D55_RS04420 PF07992 Pyridine nucleotide-disulphide oxidoreductase H1D55_RS04420 PF00724 NADH:flavin oxidoreductase / NADH oxidase family H1D55_RS04435 PF00793 DAHP synthetase I family H1D55_RS04440 PF02694 Uncharacterised BCR, YnfA/UPF0060 family H1D55_RS04445 PF00004 ATPase family associated with various cellular activities (AAA) H1D55_RS04445 PF17871 AAA lid domain H1D55_RS04445 PF02861 Clp amino terminal domain, pathogenicity island component H1D55_RS04445 PF10431 C-terminal, D2-small domain, of ClpB protein H1D55_RS04445 PF07724 AAA domain (Cdc48 subfamily) H1D55_RS04450 PF02617 ATP-dependent Clp protease adaptor protein ClpS H1D55_RS04460 PF01118 Semialdehyde dehydrogenase, NAD binding domain H1D55_RS04460 PF02774 Semialdehyde dehydrogenase, dimerisation domain H1D55_RS04475 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) H1D55_RS04480 PF00585 C-terminal regulatory domain of Threonine dehydratase H1D55_RS04480 PF00291 Pyridoxal-phosphate dependent enzyme H1D55_RS04485 PF02080 TrkA-C domain H1D55_RS04485 PF02254 TrkA-N domain H1D55_RS04490 PF02386 Cation transport protein H1D55_RS04495 PF02253 Phospholipase A1 H1D55_RS04500 PF05193 Peptidase M16 inactive domain H1D55_RS04500 PF08367 Peptidase M16C associated H1D55_RS04500 PF00675 Insulinase (Peptidase family M16) H1D55_RS04505 PF00593 TonB dependent receptor H1D55_RS04505 PF07715 TonB-dependent Receptor Plug Domain H1D55_RS04510 PF00294 pfkB family carbohydrate kinase H1D55_RS04520 PF07290 Protein of unknown function (DUF1449) H1D55_RS04530 PF01654 Cytochrome bd terminal oxidase subunit I H1D55_RS04535 PF02322 Cytochrome bd terminal oxidase subunit II H1D55_RS04540 PF08173 Membrane bound YbgT-like protein H1D55_RS04550 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) H1D55_RS04560 PF02881 SRP54-type protein, helical bundle domain H1D55_RS04560 PF00448 SRP54-type protein, GTPase domain H1D55_RS04585 PF00478 IMP dehydrogenase / GMP reductase domain H1D55_RS04585 PF00571 CBS domain H1D55_RS04590 PF00202 Aminotransferase class-III H1D55_RS04595 PF00462 Glutaredoxin H1D55_RS04605 PF03466 LysR substrate binding domain H1D55_RS04605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H1D55_RS04610 PF00557 Metallopeptidase family M24 H1D55_RS04615 PF05525 Branched-chain amino acid transport protein H1D55_RS04640 PF00381 PTS HPr component phosphorylation site H1D55_RS04640 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 H1D55_RS04640 PF02896 PEP-utilising enzyme, TIM barrel domain H1D55_RS04640 PF00391 PEP-utilising enzyme, mobile domain H1D55_RS04640 PF05524 PEP-utilising enzyme, N-terminal H1D55_RS04645 PF00294 pfkB family carbohydrate kinase H1D55_RS04650 PF02378 Phosphotransferase system, EIIC H1D55_RS04650 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit H1D55_RS04670 PF00563 EAL domain H1D55_RS04670 PF03707 Bacterial signalling protein N terminal repeat H1D55_RS04670 PF00990 Diguanylate cyclase, GGDEF domain H1D55_RS04680 PF07995 Glucose / Sorbosone dehydrogenase H1D55_RS04685 PF02586 SOS response associated peptidase (SRAP) H1D55_RS04690 PF00916 Sulfate permease family H1D55_RS04690 PF01740 STAS domain H1D55_RS04695 PF00082 Subtilase family H1D55_RS04695 PF05922 Peptidase inhibitor I9 H1D55_RS04710 PF00324 Amino acid permease H1D55_RS04715 PF00266 Aminotransferase class-V H1D55_RS04720 PF01037 Lrp/AsnC ligand binding domain H1D55_RS04745 PF13419 Haloacid dehalogenase-like hydrolase H1D55_RS04750 PF01479 S4 domain H1D55_RS04755 PF00154 recA bacterial DNA recombination protein H1D55_RS04760 PF02631 RecX family H1D55_RS04775 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 H1D55_RS04775 PF00132 Bacterial transferase hexapeptide (six repeats) H1D55_RS04780 PF07977 FabA-like domain H1D55_RS04785 PF00132 Bacterial transferase hexapeptide (six repeats) H1D55_RS04785 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD H1D55_RS04795 PF01103 Surface antigen H1D55_RS04795 PF07244 Surface antigen variable number repeat H1D55_RS04800 PF02163 Peptidase family M50 H1D55_RS04800 PF13180 PDZ domain H1D55_RS04800 PF17820 PDZ domain H1D55_RS04805 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase H1D55_RS04805 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain H1D55_RS04805 PF13288 DXP reductoisomerase C-terminal domain H1D55_RS04815 PF01255 Putative undecaprenyl diphosphate synthase H1D55_RS04820 PF01765 Ribosome recycling factor H1D55_RS04825 PF00696 Amino acid kinase family H1D55_RS04830 PF18693 TRAM domain H1D55_RS04830 PF04055 Radical SAM superfamily H1D55_RS04830 PF00919 Uncharacterized protein family UPF0004 H1D55_RS04840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H1D55_RS04840 PF00512 His Kinase A (phospho-acceptor) domain H1D55_RS04840 PF00989 PAS fold H1D55_RS04845 PF00158 Sigma-54 interaction domain H1D55_RS04845 PF02954 Bacterial regulatory protein, Fis family H1D55_RS04845 PF00072 Response regulator receiver domain H1D55_RS04850 PF00440 Bacterial regulatory proteins, tetR family H1D55_RS04855 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain H1D55_RS04855 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain H1D55_RS04865 PF02542 YgbB family H1D55_RS04875 PF01266 FAD dependent oxidoreductase H1D55_RS04895 PF10415 Fumarase C C-terminus H1D55_RS04895 PF00206 Lyase H1D55_RS04900 PF16363 GDP-mannose 4,6 dehydratase H1D55_RS04905 PF02635 DsrE/DsrF-like family H1D55_RS04925 PF00892 EamA-like transporter family H1D55_RS04930 PF00392 Bacterial regulatory proteins, gntR family H1D55_RS04930 PF00155 Aminotransferase class I and II H1D55_RS04935 PF01638 HxlR-like helix-turn-helix H1D55_RS04940 PF03454 MoeA C-terminal region (domain IV) H1D55_RS04940 PF03453 MoeA N-terminal region (domain I and II) H1D55_RS04940 PF00994 Probable molybdopterin binding domain H1D55_RS04945 PF01967 MoaC family H1D55_RS04945 PF00994 Probable molybdopterin binding domain H1D55_RS04950 PF02391 MoaE protein H1D55_RS04960 PF06463 Molybdenum Cofactor Synthesis C H1D55_RS04960 PF04055 Radical SAM superfamily H1D55_RS04965 PF00384 Molybdopterin oxidoreductase H1D55_RS04965 PF01568 Molydopterin dinucleotide binding domain H1D55_RS04965 PF04879 Molybdopterin oxidoreductase Fe4S4 domain H1D55_RS04970 PF12804 MobA-like NTP transferase domain H1D55_RS04975 PF00384 Molybdopterin oxidoreductase H1D55_RS04975 PF04879 Molybdopterin oxidoreductase Fe4S4 domain H1D55_RS04975 PF01568 Molydopterin dinucleotide binding domain H1D55_RS04975 PF04324 BFD-like [2Fe-2S] binding domain H1D55_RS04980 PF07992 Pyridine nucleotide-disulphide oxidoreductase H1D55_RS04980 PF04324 BFD-like [2Fe-2S] binding domain H1D55_RS04980 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain H1D55_RS04980 PF18267 Rubredoxin NAD+ reductase C-terminal domain H1D55_RS04980 PF01077 Nitrite and sulphite reductase 4Fe-4S domain H1D55_RS04985 PF04324 BFD-like [2Fe-2S] binding domain H1D55_RS04985 PF01077 Nitrite and sulphite reductase 4Fe-4S domain H1D55_RS04985 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain H1D55_RS04985 PF07992 Pyridine nucleotide-disulphide oxidoreductase H1D55_RS04985 PF13806 Rieske-like [2Fe-2S] domain H1D55_RS04985 PF18267 Rubredoxin NAD+ reductase C-terminal domain H1D55_RS04995 PF00072 Response regulator receiver domain H1D55_RS04995 PF00486 Transcriptional regulatory protein, C terminal H1D55_RS05000 PF00005 ABC transporter H1D55_RS05010 PF13438 Domain of unknown function (DUF4113) H1D55_RS05010 PF00817 impB/mucB/samB family H1D55_RS05010 PF11799 impB/mucB/samB family C-terminal domain H1D55_RS05015 PF01220 Dehydroquinase class II H1D55_RS05020 PF00364 Biotin-requiring enzyme H1D55_RS05025 PF02785 Biotin carboxylase C-terminal domain H1D55_RS05025 PF00289 Biotin carboxylase, N-terminal domain H1D55_RS05025 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain H1D55_RS05035 PF12832 MFS_1 like family H1D55_RS05055 PF01645 Conserved region in glutamate synthase H1D55_RS05070 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain H1D55_RS05070 PF01565 FAD binding domain H1D55_RS05075 PF01451 Low molecular weight phosphotyrosine protein phosphatase H1D55_RS05085 PF00465 Iron-containing alcohol dehydrogenase H1D55_RS05090 PF03061 Thioesterase superfamily H1D55_RS05095 PF05506 Domain of unknown function (DUF756) H1D55_RS05095 PF04185 Phosphoesterase family H1D55_RS05105 PF12169 DNA polymerase III subunits gamma and tau domain III H1D55_RS05105 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding H1D55_RS05105 PF12170 DNA polymerase III tau subunit V interacting with alpha H1D55_RS05110 PF07690 Major Facilitator Superfamily H1D55_RS05125 PF01575 MaoC like domain H1D55_RS05135 PF00108 Thiolase, N-terminal domain H1D55_RS05135 PF02803 Thiolase, C-terminal domain H1D55_RS05145 PF03466 LysR substrate binding domain H1D55_RS05145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H1D55_RS05150 PF00923 Transaldolase/Fructose-6-phosphate aldolase H1D55_RS05155 PF01810 LysE type translocator H1D55_RS05160 PF01037 Lrp/AsnC ligand binding domain H1D55_RS05165 PF03594 Benzoate membrane transport protein H1D55_RS05170 PF02308 MgtC family H1D55_RS05175 PF00689 Cation transporting ATPase, C-terminus H1D55_RS05175 PF00690 Cation transporter/ATPase, N-terminus H1D55_RS05200 PF00582 Universal stress protein family H1D55_RS05205 PF00005 ABC transporter H1D55_RS05205 PF12848 ABC transporter H1D55_RS05225 PF07715 TonB-dependent Receptor Plug Domain H1D55_RS05225 PF00593 TonB dependent receptor H1D55_RS05255 PF00924 Mechanosensitive ion channel H1D55_RS05260 PF07715 TonB-dependent Receptor Plug Domain H1D55_RS05260 PF00593 TonB dependent receptor H1D55_RS05265 PF00440 Bacterial regulatory proteins, tetR family H1D55_RS05280 PF01037 Lrp/AsnC ligand binding domain H1D55_RS05285 PF01817 Chorismate mutase type II H1D55_RS05310 PF13953 PapC C-terminal domain H1D55_RS05310 PF13954 PapC N-terminal domain H1D55_RS05310 PF00577 Outer membrane usher protein H1D55_RS05325 PF17432 Domain of unknown function (DUF3458_C) ARM repeats H1D55_RS05325 PF01433 Peptidase family M1 domain H1D55_RS05325 PF11940 Domain of unknown function (DUF3458) Ig-like fold H1D55_RS05340 PF02110 Hydroxyethylthiazole kinase family H1D55_RS05350 PF14493 Helix-turn-helix domain H1D55_RS05350 PF05970 PIF1-like helicase H1D55_RS05355 PF00465 Iron-containing alcohol dehydrogenase H1D55_RS05370 PF00171 Aldehyde dehydrogenase family H1D55_RS05375 PF13520 Amino acid permease H1D55_RS05380 PF06751 Ethanolamine ammonia lyase large subunit (EutB) H1D55_RS05385 PF05985 Ethanolamine ammonia-lyase light chain (EutC) H1D55_RS05390 PF00117 Glutamine amidotransferase class-I H1D55_RS05390 PF00958 GMP synthase C terminal domain H1D55_RS05390 PF02540 NAD synthase H1D55_RS05395 PF00749 tRNA synthetases class I (E and Q), catalytic domain H1D55_RS05395 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain H1D55_RS05400 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD H1D55_RS05405 PF00149 Calcineurin-like phosphoesterase H1D55_RS05415 PF00881 Nitroreductase family H1D55_RS05425 PF17209 Hfq protein H1D55_RS05435 PF01119 DNA mismatch repair protein, C-terminal domain H1D55_RS05435 PF08676 MutL C terminal dimerisation domain H1D55_RS05440 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE H1D55_RS05445 PF00849 RNA pseudouridylate synthase H1D55_RS05445 PF01479 S4 domain H1D55_RS05460 PF00849 RNA pseudouridylate synthase H1D55_RS05460 PF01479 S4 domain H1D55_RS05470 PF04284 Protein of unknown function (DUF441) H1D55_RS05475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H1D55_RS05475 PF03466 LysR substrate binding domain H1D55_RS05490 PF07690 Major Facilitator Superfamily H1D55_RS05495 PF00027 Cyclic nucleotide-binding domain H1D55_RS05495 PF00520 Ion transport protein H1D55_RS05505 PF00330 Aconitase family (aconitate hydratase) H1D55_RS05505 PF06434 Aconitate hydratase 2 N-terminus H1D55_RS05505 PF11791 Aconitate B N-terminal domain H1D55_RS05520 PF01103 Surface antigen H1D55_RS05520 PF07244 Surface antigen variable number repeat H1D55_RS05520 PF17243 POTRA domain TamA domain 1 H1D55_RS05525 PF07690 Major Facilitator Superfamily H1D55_RS05530 PF03232 Ubiquinone biosynthesis protein COQ7 H1D55_RS05540 PF00120 Glutamine synthetase, catalytic domain H1D55_RS05545 PF00072 Response regulator receiver domain H1D55_RS05545 PF00486 Transcriptional regulatory protein, C terminal H1D55_RS05550 PF02702 Osmosensitive K+ channel His kinase sensor domain H1D55_RS05550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H1D55_RS05550 PF00512 His Kinase A (phospho-acceptor) domain H1D55_RS05550 PF13493 Domain of unknown function (DUF4118) H1D55_RS05555 PF02669 K+-transporting ATPase, c chain H1D55_RS05565 PF03814 Potassium-transporting ATPase A subunit H1D55_RS05580 PF03109 ABC1 family H1D55_RS05585 PF00899 ThiF family H1D55_RS05590 PF01613 Flavin reductase like domain H1D55_RS05595 PF00501 AMP-binding enzyme H1D55_RS05595 PF13193 AMP-binding enzyme C-terminal domain H1D55_RS05600 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H1D55_RS05600 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H1D55_RS05600 PF02770 Acyl-CoA dehydrogenase, middle domain H1D55_RS05605 PF00106 short chain dehydrogenase H1D55_RS05610 PF12833 Helix-turn-helix domain H1D55_RS05615 PF17827 PrmC N-terminal domain H1D55_RS05615 PF13847 Methyltransferase domain H1D55_RS05620 PF00472 RF-1 domain H1D55_RS05620 PF03462 PCRF domain H1D55_RS05630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H1D55_RS05630 PF03466 LysR substrate binding domain H1D55_RS05645 PF00296 Luciferase-like monooxygenase H1D55_RS05655 PF13994 PgaD-like protein H1D55_RS05660 PF00535 Glycosyl transferase family 2 H1D55_RS05665 PF14883 Hypothetical glycosyl hydrolase family 13 H1D55_RS05665 PF01522 Polysaccharide deacetylase H1D55_RS05675 PF03618 Kinase/pyrophosphorylase H1D55_RS05680 PF00391 PEP-utilising enzyme, mobile domain H1D55_RS05680 PF02896 PEP-utilising enzyme, TIM barrel domain H1D55_RS05680 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain H1D55_RS05690 PF00116 Cytochrome C oxidase subunit II, periplasmic domain H1D55_RS05690 PF06481 COX Aromatic Rich Motif H1D55_RS05695 PF00115 Cytochrome C and Quinol oxidase polypeptide I H1D55_RS05700 PF00510 Cytochrome c oxidase subunit III H1D55_RS05705 PF03626 Prokaryotic Cytochrome C oxidase subunit IV H1D55_RS05710 PF01040 UbiA prenyltransferase family H1D55_RS05715 PF01250 Ribosomal protein S6 H1D55_RS05720 PF01084 Ribosomal protein S18 H1D55_RS05725 PF03948 Ribosomal protein L9, C-terminal domain H1D55_RS05725 PF01281 Ribosomal protein L9, N-terminal domain H1D55_RS05730 PF00772 DnaB-like helicase N terminal domain H1D55_RS05730 PF03796 DnaB-like helicase C terminal domain H1D55_RS05735 PF00842 Alanine racemase, C-terminal domain H1D55_RS05735 PF01168 Alanine racemase, N-terminal domain H1D55_RS05745 PF01841 Transglutaminase-like superfamily H1D55_RS05745 PF08379 Bacterial transglutaminase-like N-terminal region H1D55_RS05755 PF14403 Circularly permuted ATP-grasp type 2 H1D55_RS05765 PF01134 Glucose inhibited division protein A H1D55_RS05765 PF13932 GidA associated domain H1D55_RS05785 PF02954 Bacterial regulatory protein, Fis family H1D55_RS05790 PF01808 AICARFT/IMPCHase bienzyme H1D55_RS05790 PF02142 MGS-like domain H1D55_RS05795 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain H1D55_RS05795 PF02843 Phosphoribosylglycinamide synthetase, C domain H1D55_RS05795 PF02844 Phosphoribosylglycinamide synthetase, N domain H1D55_RS05800 PF03180 NLPA lipoprotein H1D55_RS05805 PF00005 ABC transporter H1D55_RS05805 PF09383 NIL domain H1D55_RS05810 PF00528 Binding-protein-dependent transport system inner membrane component H1D55_RS05815 PF16123 Hydroxyacylglutathione hydrolase C-terminus H1D55_RS05815 PF00753 Metallo-beta-lactamase superfamily H1D55_RS05825 PF00375 Sodium:dicarboxylate symporter family H1D55_RS05845 PF07995 Glucose / Sorbosone dehydrogenase H1D55_RS05850 PF00892 EamA-like transporter family H1D55_RS05855 PF01177 Asp/Glu/Hydantoin racemase H1D55_RS05875 PF00072 Response regulator receiver domain H1D55_RS05875 PF00486 Transcriptional regulatory protein, C terminal H1D55_RS05880 PF00512 His Kinase A (phospho-acceptor) domain H1D55_RS05880 PF08521 Two-component sensor kinase N-terminal H1D55_RS05880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H1D55_RS05920 PF00672 HAMP domain H1D55_RS05920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H1D55_RS05920 PF00512 His Kinase A (phospho-acceptor) domain H1D55_RS05925 PF00072 Response regulator receiver domain H1D55_RS05925 PF00486 Transcriptional regulatory protein, C terminal H1D55_RS05935 PF00576 HIUase/Transthyretin family H1D55_RS05945 PF02470 MlaD protein H1D55_RS05950 PF04403 Paraquat-inducible protein A H1D55_RS05985 PF00293 NUDIX domain H1D55_RS05990 PF00083 Sugar (and other) transporter H1D55_RS05990 PF08946 Osmosensory transporter coiled coil H1D55_RS06040 PF00392 Bacterial regulatory proteins, gntR family H1D55_RS06040 PF07729 FCD domain H1D55_RS06050 PF03616 Sodium/glutamate symporter H1D55_RS06055 PF00561 alpha/beta hydrolase fold H1D55_RS06080 PF04076 Bacterial OB fold (BOF) protein H1D55_RS06110 PF00324 Amino acid permease H1D55_RS06115 PF00171 Aldehyde dehydrogenase family H1D55_RS06120 PF00202 Aminotransferase class-III H1D55_RS06125 PF03466 LysR substrate binding domain H1D55_RS06125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H1D55_RS06150 PF00069 Protein kinase domain H1D55_RS06170 PF00814 Glycoprotease family H1D55_RS06175 PF01165 Ribosomal protein S21 H1D55_RS06180 PF09424 Yqey-like protein H1D55_RS06185 PF01435 Peptidase family M48 H1D55_RS06190 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H1D55_RS06190 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H1D55_RS06205 PF00156 Phosphoribosyl transferase domain H1D55_RS06210 PF02674 Colicin V production protein H1D55_RS06215 PF01180 Dihydroorotate dehydrogenase H1D55_RS06235 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus H1D55_RS06235 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus H1D55_RS06240 PF00881 Nitroreductase family H1D55_RS06250 PF00270 DEAD/DEAH box helicase H1D55_RS06250 PF00271 Helicase conserved C-terminal domain H1D55_RS06255 PF00313 'Cold-shock' DNA-binding domain H1D55_RS06270 PF00140 Sigma-70 factor, region 1.2 H1D55_RS06270 PF04542 Sigma-70 region 2 H1D55_RS06270 PF04545 Sigma-70, region 4 H1D55_RS06275 PF04241 Protein of unknown function (DUF423) H1D55_RS06285 PF05690 Thiazole biosynthesis protein ThiG H1D55_RS06295 PF03883 Peroxide stress protein YaaA H1D55_RS06305 PF00753 Metallo-beta-lactamase superfamily H1D55_RS06310 PF07687 Peptidase dimerisation domain H1D55_RS06310 PF01546 Peptidase family M20/M25/M40 H1D55_RS06320 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) H1D55_RS06325 PF01842 ACT domain H1D55_RS06325 PF00800 Prephenate dehydratase H1D55_RS06325 PF01817 Chorismate mutase type II H1D55_RS06330 PF00756 Putative esterase H1D55_RS06335 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H1D55_RS06335 PF02770 Acyl-CoA dehydrogenase, middle domain H1D55_RS06335 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H1D55_RS06340 PF00375 Sodium:dicarboxylate symporter family H1D55_RS06345 PF02885 Glycosyl transferase family, helical bundle domain H1D55_RS06345 PF00591 Glycosyl transferase family, a/b domain H1D55_RS06350 PF07023 Protein of unknown function (DUF1315) H1D55_RS06355 PF01513 ATP-NAD kinase H1D55_RS06360 PF00912 Transglycosylase H1D55_RS06360 PF00905 Penicillin binding protein transpeptidase domain H1D55_RS06360 PF14814 Bifunctional transglycosylase second domain H1D55_RS06370 PF00293 NUDIX domain H1D55_RS06380 PF08521 Two-component sensor kinase N-terminal H1D55_RS06380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H1D55_RS06380 PF00512 His Kinase A (phospho-acceptor) domain H1D55_RS06385 PF00486 Transcriptional regulatory protein, C terminal H1D55_RS06385 PF00072 Response regulator receiver domain H1D55_RS06390 PF04076 Bacterial OB fold (BOF) protein H1D55_RS06395 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain H1D55_RS06395 PF00437 Type II/IV secretion system protein H1D55_RS06405 PF18389 TrmO C-terminal domain H1D55_RS06405 PF01980 tRNA-methyltransferase O H1D55_RS06410 PF00970 Oxidoreductase FAD-binding domain H1D55_RS06410 PF00175 Oxidoreductase NAD-binding domain H1D55_RS06415 PF02567 Phenazine biosynthesis-like protein H1D55_RS06420 PF00392 Bacterial regulatory proteins, gntR family H1D55_RS06420 PF00155 Aminotransferase class I and II H1D55_RS06425 PF16325 Peptidase family U32 C-terminal domain H1D55_RS06425 PF01136 Peptidase family U32 H1D55_RS06430 PF00037 4Fe-4S binding domain H1D55_RS06435 PF00893 Small Multidrug Resistance protein H1D55_RS06440 PF00005 ABC transporter H1D55_RS06445 PF00528 Binding-protein-dependent transport system inner membrane component H1D55_RS06450 PF00528 Binding-protein-dependent transport system inner membrane component H1D55_RS06455 PF00497 Bacterial extracellular solute-binding proteins, family 3 H1D55_RS06460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H1D55_RS06460 PF03466 LysR substrate binding domain H1D55_RS06465 PF13533 Biotin-lipoyl like H1D55_RS06470 PF00873 AcrB/AcrD/AcrF family H1D55_RS06475 PF02321 Outer membrane efflux protein H1D55_RS06480 PF00464 Serine hydroxymethyltransferase H1D55_RS06510 PF00005 ABC transporter H1D55_RS06515 PF01061 ABC-2 type transporter H1D55_RS06520 PF14489 QueF-like protein H1D55_RS06520 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term H1D55_RS06530 PF01098 Cell cycle protein H1D55_RS06535 PF13406 Transglycosylase SLT domain H1D55_RS06540 PF05036 Sporulation related domain H1D55_RS06540 PF03330 Lytic transglycolase H1D55_RS06560 PF12833 Helix-turn-helix domain H1D55_RS06570 PF00889 Elongation factor TS H1D55_RS06575 PF00318 Ribosomal protein S2 H1D55_RS06580 PF00557 Metallopeptidase family M24 H1D55_RS06590 PF07690 Major Facilitator Superfamily H1D55_RS06600 PF07992 Pyridine nucleotide-disulphide oxidoreductase H1D55_RS06600 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H1D55_RS06605 PF04055 Radical SAM superfamily H1D55_RS06610 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H1D55_RS06610 PF09317 Domain of unknown function (DUF1974) H1D55_RS06610 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H1D55_RS06625 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain H1D55_RS06625 PF05221 S-adenosyl-L-homocysteine hydrolase H1D55_RS06630 PF02219 Methylenetetrahydrofolate reductase H1D55_RS06635 PF04452 RNA methyltransferase H1D55_RS06640 PF00990 Diguanylate cyclase, GGDEF domain H1D55_RS06640 PF03707 Bacterial signalling protein N terminal repeat H1D55_RS06640 PF00563 EAL domain H1D55_RS06645 PF01515 Phosphate acetyl/butaryl transferase H1D55_RS06645 PF00390 Malic enzyme, N-terminal domain H1D55_RS06645 PF03949 Malic enzyme, NAD binding domain H1D55_RS06650 PF01743 Poly A polymerase head domain H1D55_RS06650 PF12627 Probable RNA and SrmB- binding site of polymerase A H1D55_RS06655 PF13180 PDZ domain H1D55_RS06660 PF01784 NIF3 (NGG1p interacting factor 3) H1D55_RS06665 PF02777 Iron/manganese superoxide dismutases, C-terminal domain H1D55_RS06665 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain H1D55_RS06700 PF01040 UbiA prenyltransferase family H1D55_RS06705 PF04345 Chorismate lyase H1D55_RS06710 PF00120 Glutamine synthetase, catalytic domain H1D55_RS06710 PF03951 Glutamine synthetase, beta-Grasp domain H1D55_RS06715 PF00854 POT family H1D55_RS06725 PF00117 Glutamine amidotransferase class-I H1D55_RS06730 PF11838 ERAP1-like C-terminal domain H1D55_RS06730 PF01433 Peptidase family M1 domain H1D55_RS06735 PF07715 TonB-dependent Receptor Plug Domain H1D55_RS06735 PF00593 TonB dependent receptor H1D55_RS06740 PF02885 Glycosyl transferase family, helical bundle domain H1D55_RS06740 PF00591 Glycosyl transferase family, a/b domain H1D55_RS06745 PF00218 Indole-3-glycerol phosphate synthase H1D55_RS06760 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain H1D55_RS06760 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase H1D55_RS06765 PF00111 2Fe-2S iron-sulfur cluster binding domain H1D55_RS06765 PF01799 [2Fe-2S] binding domain H1D55_RS06770 PF01227 GTP cyclohydrolase I H1D55_RS06775 PF00144 Beta-lactamase H1D55_RS06790 PF05675 Protein of unknown function (DUF817) H1D55_RS06795 PF01208 Uroporphyrinogen decarboxylase (URO-D) H1D55_RS06805 PF00425 chorismate binding enzyme H1D55_RS06815 PF00975 Thioesterase domain H1D55_RS06820 PF00005 ABC transporter H1D55_RS06825 PF00664 ABC transporter transmembrane region H1D55_RS06825 PF00005 ABC transporter H1D55_RS06830 PF00282 Pyridoxal-dependent decarboxylase conserved domain H1D55_RS06835 PF00857 Isochorismatase family H1D55_RS06835 PF00550 Phosphopantetheine attachment site H1D55_RS06840 PF13193 AMP-binding enzyme C-terminal domain H1D55_RS06840 PF00501 AMP-binding enzyme H1D55_RS06845 PF00550 Phosphopantetheine attachment site H1D55_RS06845 PF00668 Condensation domain H1D55_RS06845 PF00501 AMP-binding enzyme H1D55_RS06850 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) H1D55_RS06855 PF07715 TonB-dependent Receptor Plug Domain H1D55_RS06855 PF00593 TonB dependent receptor H1D55_RS06860 PF01497 Periplasmic binding protein H1D55_RS06865 PF00005 ABC transporter H1D55_RS06870 PF01032 FecCD transport family H1D55_RS06875 PF01032 FecCD transport family H1D55_RS06880 PF00501 AMP-binding enzyme H1D55_RS06880 PF13193 AMP-binding enzyme C-terminal domain H1D55_RS06880 PF00668 Condensation domain H1D55_RS06880 PF00550 Phosphopantetheine attachment site H1D55_RS06880 PF00975 Thioesterase domain H1D55_RS06885 PF00550 Phosphopantetheine attachment site H1D55_RS06885 PF00501 AMP-binding enzyme H1D55_RS06885 PF00668 Condensation domain H1D55_RS06885 PF13193 AMP-binding enzyme C-terminal domain H1D55_RS06895 PF08348 YheO-like PAS domain H1D55_RS06895 PF13309 HTH domain H1D55_RS06900 PF00291 Pyridoxal-phosphate dependent enzyme H1D55_RS06905 PF17954 Quercetinase C-terminal cupin domain H1D55_RS06905 PF02678 Pirin H1D55_RS06940 PF04328 Selenoprotein, putative H1D55_RS06945 PF02554 Carbon starvation protein CstA H1D55_RS06945 PF13722 5TM C-terminal transporter carbon starvation CstA H1D55_RS06950 PF01132 Elongation factor P (EF-P) OB domain H1D55_RS06950 PF09285 Elongation factor P, C-terminal H1D55_RS06950 PF08207 Elongation factor P (EF-P) KOW-like domain H1D55_RS06955 PF04055 Radical SAM superfamily H1D55_RS06965 PF00563 EAL domain H1D55_RS06965 PF12792 CSS motif domain associated with EAL H1D55_RS06970 PF01197 Ribosomal protein L31 H1D55_RS06975 PF13593 SBF-like CPA transporter family (DUF4137) H1D55_RS06980 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H1D55_RS06985 PF07690 Major Facilitator Superfamily H1D55_RS06990 PF05362 Lon protease (S16) C-terminal proteolytic domain H1D55_RS06990 PF13654 AAA domain H1D55_RS06995 PF03466 LysR substrate binding domain H1D55_RS06995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H1D55_RS07000 PF01476 LysM domain H1D55_RS07000 PF01551 Peptidase family M23 H1D55_RS07005 PF01975 Survival protein SurE H1D55_RS07020 PF07943 Penicillin-binding protein 5, C-terminal domain H1D55_RS07020 PF00768 D-alanyl-D-alanine carboxypeptidase H1D55_RS07025 PF00132 Bacterial transferase hexapeptide (six repeats) H1D55_RS07030 PF13344 Haloacid dehalogenase-like hydrolase H1D55_RS07030 PF00293 NUDIX domain H1D55_RS07040 PF04356 Protein of unknown function (DUF489) H1D55_RS07045 PF08328 Adenylosuccinate lyase C-terminal H1D55_RS07045 PF00206 Lyase H1D55_RS07060 PF01343 Peptidase family S49 H1D55_RS07060 PF08496 Peptidase family S49 N-terminal H1D55_RS07065 PF00005 ABC transporter H1D55_RS07070 PF00528 Binding-protein-dependent transport system inner membrane component H1D55_RS07075 PF00528 Binding-protein-dependent transport system inner membrane component H1D55_RS07080 PF12849 PBP superfamily domain H1D55_RS07085 PF00324 Amino acid permease H1D55_RS07090 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain H1D55_RS07090 PF00205 Thiamine pyrophosphate enzyme, central domain H1D55_RS07090 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain H1D55_RS07095 PF01037 Lrp/AsnC ligand binding domain H1D55_RS07100 PF00171 Aldehyde dehydrogenase family H1D55_RS07105 PF00282 Pyridoxal-dependent decarboxylase conserved domain H1D55_RS07110 PF00202 Aminotransferase class-III H1D55_RS07125 PF02525 Flavodoxin-like fold H1D55_RS07130 PF00487 Fatty acid desaturase H1D55_RS07135 PF00970 Oxidoreductase FAD-binding domain H1D55_RS07135 PF00111 2Fe-2S iron-sulfur cluster binding domain H1D55_RS07135 PF00175 Oxidoreductase NAD-binding domain H1D55_RS07140 PF00440 Bacterial regulatory proteins, tetR family H1D55_RS07150 PF00271 Helicase conserved C-terminal domain H1D55_RS07150 PF12137 RNA polymerase recycling family C-terminal H1D55_RS07150 PF00176 SNF2 family N-terminal domain H1D55_RS07150 PF18339 RapA N-terminal Tudor like domain 1 H1D55_RS07150 PF18337 RapA N-terminal Tudor like domain H1D55_RS07155 PF00849 RNA pseudouridylate synthase H1D55_RS07165 PF00202 Aminotransferase class-III H1D55_RS07170 PF02581 Thiamine monophosphate synthase H1D55_RS07195 PF05193 Peptidase M16 inactive domain H1D55_RS07195 PF00675 Insulinase (Peptidase family M16) H1D55_RS07200 PF02567 Phenazine biosynthesis-like protein H1D55_RS07205 PF00375 Sodium:dicarboxylate symporter family H1D55_RS07210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H1D55_RS07210 PF03466 LysR substrate binding domain H1D55_RS07215 PF06779 Uncharacterised MFS-type transporter YbfB H1D55_RS07235 PF00180 Isocitrate/isopropylmalate dehydrogenase H1D55_RS07240 PF00849 RNA pseudouridylate synthase H1D55_RS07245 PF03971 Monomeric isocitrate dehydrogenase H1D55_RS07255 PF07943 Penicillin-binding protein 5, C-terminal domain H1D55_RS07255 PF00768 D-alanyl-D-alanine carboxypeptidase H1D55_RS07260 PF07992 Pyridine nucleotide-disulphide oxidoreductase H1D55_RS07265 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H1D55_RS07270 PF00875 DNA photolyase H1D55_RS07270 PF03441 FAD binding domain of DNA photolyase H1D55_RS07300 PF02350 UDP-N-acetylglucosamine 2-epimerase H1D55_RS07315 PF03060 Nitronate monooxygenase H1D55_RS07320 PF01207 Dihydrouridine synthase (Dus) H1D55_RS07325 PF07759 Protein of unknown function (DUF1615) H1D55_RS07335 PF00696 Amino acid kinase family H1D55_RS07335 PF01472 PUA domain H1D55_RS07340 PF01926 50S ribosome-binding GTPase H1D55_RS07340 PF01018 GTP1/OBG H1D55_RS07355 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain H1D55_RS07355 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain H1D55_RS07360 PF00892 EamA-like transporter family H1D55_RS07370 PF00271 Helicase conserved C-terminal domain H1D55_RS07370 PF17757 UvrB interaction domain H1D55_RS07370 PF12344 Ultra-violet resistance protein B H1D55_RS07370 PF02151 UvrB/uvrC motif H1D55_RS07370 PF04851 Type III restriction enzyme, res subunit H1D55_RS07380 PF00990 Diguanylate cyclase, GGDEF domain H1D55_RS07380 PF17151 Periplasmic sensor domain H1D55_RS07390 PF00155 Aminotransferase class I and II H1D55_RS07400 PF00012 Hsp70 protein H1D55_RS07430 PF00106 short chain dehydrogenase H1D55_RS07435 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) H1D55_RS07440 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ H1D55_RS07445 PF11967 Recombination protein O N terminal H1D55_RS07445 PF02565 Recombination protein O C terminal H1D55_RS07455 PF01926 50S ribosome-binding GTPase H1D55_RS07455 PF07650 KH domain H1D55_RS07460 PF14622 Ribonuclease-III-like H1D55_RS07460 PF00035 Double-stranded RNA binding motif H1D55_RS07470 PF10502 Signal peptidase, peptidase S26 H1D55_RS07475 PF00679 Elongation factor G C-terminus H1D55_RS07475 PF06421 GTP-binding protein LepA C-terminus H1D55_RS07475 PF03144 Elongation factor Tu domain 2 H1D55_RS07475 PF00009 Elongation factor Tu GTP binding domain H1D55_RS07485 PF13180 PDZ domain H1D55_RS07490 PF02910 Fumarate reductase flavoprotein C-term H1D55_RS07490 PF00890 FAD binding domain H1D55_RS07500 PF02223 Thymidylate kinase H1D55_RS07505 PF02618 YceG-like family H1D55_RS07510 PF01063 Amino-transferase class IV H1D55_RS07525 PF00528 Binding-protein-dependent transport system inner membrane component H1D55_RS07530 PF00528 Binding-protein-dependent transport system inner membrane component H1D55_RS07535 PF12857 TOBE-like domain H1D55_RS07535 PF00005 ABC transporter H1D55_RS07540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H1D55_RS07540 PF03466 LysR substrate binding domain H1D55_RS07550 PF00132 Bacterial transferase hexapeptide (six repeats) H1D55_RS07550 PF14602 Hexapeptide repeat of succinyl-transferase H1D55_RS07550 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal H1D55_RS07560 PF06508 Queuosine biosynthesis protein QueC H1D55_RS07575 PF00578 AhpC/TSA family H1D55_RS07585 PF00293 NUDIX domain H1D55_RS07585 PF01467 Cytidylyltransferase-like H1D55_RS07590 PF00378 Enoyl-CoA hydratase/isomerase H1D55_RS07595 PF01784 NIF3 (NGG1p interacting factor 3) H1D55_RS07600 PF07690 Major Facilitator Superfamily H1D55_RS07605 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal H1D55_RS07605 PF02769 AIR synthase related protein, C-terminal domain H1D55_RS07605 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain H1D55_RS07610 PF01966 HD domain H1D55_RS07615 PF07499 RuvA, C-terminal domain H1D55_RS07615 PF01330 RuvA N terminal domain H1D55_RS07620 PF05491 RuvB C-terminal winged helix domain H1D55_RS07620 PF17864 RuvB AAA lid domain H1D55_RS07620 PF05496 Holliday junction DNA helicase RuvB P-loop domain H1D55_RS07625 PF07687 Peptidase dimerisation domain H1D55_RS07625 PF01546 Peptidase family M20/M25/M40 H1D55_RS07630 PF03061 Thioesterase superfamily H1D55_RS07635 PF01618 MotA/TolQ/ExbB proton channel family H1D55_RS07640 PF02472 Biopolymer transport protein ExbD/TolR H1D55_RS07650 PF04052 TolB amino-terminal domain H1D55_RS07650 PF07676 WD40-like Beta Propeller Repeat H1D55_RS07655 PF00691 OmpA family H1D55_RS07665 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain H1D55_RS07670 PF00588 SpoU rRNA Methylase family H1D55_RS07670 PF08032 RNA 2'-O ribose methyltransferase substrate binding H1D55_RS07700 PF00308 Bacterial dnaA protein H1D55_RS07700 PF08299 Bacterial dnaA protein helix-turn-helix H1D55_RS07700 PF11638 DnaA N-terminal domain H1D55_RS07705 PF01594 AI-2E family transporter H1D55_RS07710 PF00586 AIR synthase related protein, N-terminal domain H1D55_RS07710 PF02769 AIR synthase related protein, C-terminal domain H1D55_RS07715 PF00551 Formyl transferase H1D55_RS07720 PF12697 Alpha/beta hydrolase family H1D55_RS07725 PF06965 Na+/H+ antiporter 1 H1D55_RS07725 PF01343 Peptidase family S49 H1D55_RS07735 PF03772 Competence protein H1D55_RS07735 PF13567 Domain of unknown function (DUF4131) H1D55_RS07735 PF00753 Metallo-beta-lactamase superfamily H1D55_RS07740 PF00005 ABC transporter H1D55_RS07745 PF02687 FtsX-like permease family H1D55_RS07745 PF12704 MacB-like periplasmic core domain H1D55_RS07755 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 H1D55_RS07770 PF00266 Aminotransferase class-V H1D55_RS07780 PF13533 Biotin-lipoyl like H1D55_RS07800 PF00535 Glycosyl transferase family 2 H1D55_RS07815 PF03989 DNA gyrase C-terminal domain, beta-propeller H1D55_RS07815 PF00521 DNA gyrase/topoisomerase IV, subunit A H1D55_RS07820 PF01012 Electron transfer flavoprotein domain H1D55_RS07820 PF00766 Electron transfer flavoprotein FAD-binding domain H1D55_RS07825 PF01012 Electron transfer flavoprotein domain H1D55_RS07830 PF02899 Phage integrase, N-terminal SAM-like domain H1D55_RS07830 PF00589 Phage integrase family H1D55_RS07835 PF01810 LysE type translocator H1D55_RS07840 PF00561 alpha/beta hydrolase fold H1D55_RS07845 PF03747 ADP-ribosylglycohydrolase H1D55_RS07850 PF01678 Diaminopimelate epimerase H1D55_RS07855 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain H1D55_RS07855 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain H1D55_RS07865 PF00324 Amino acid permease H1D55_RS07870 PF18073 Rubredoxin metal binding domain H1D55_RS07880 PF00152 tRNA synthetases class II (D, K and N) H1D55_RS07885 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H1D55_RS07885 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H1D55_RS07885 PF11890 Domain of unknown function (DUF3410) H1D55_RS07890 PF06803 Protein of unknown function (DUF1232) H1D55_RS07895 PF02634 FdhD/NarQ family H1D55_RS07900 PF00384 Molybdopterin oxidoreductase H1D55_RS07905 PF02595 Glycerate kinase family H1D55_RS07920 PF00881 Nitroreductase family H1D55_RS07945 PF00668 Condensation domain H1D55_RS07945 PF00975 Thioesterase domain H1D55_RS07945 PF00501 AMP-binding enzyme H1D55_RS07945 PF00550 Phosphopantetheine attachment site H1D55_RS07945 PF13193 AMP-binding enzyme C-terminal domain H1D55_RS07960 PF01272 Transcription elongation factor, GreA/GreB, C-term H1D55_RS07960 PF03449 Transcription elongation factor, N-terminal H1D55_RS07965 PF00497 Bacterial extracellular solute-binding proteins, family 3 H1D55_RS07965 PF01464 Transglycosylase SLT domain H1D55_RS07975 PF01171 PP-loop family H1D55_RS07980 PF01464 Transglycosylase SLT domain H1D55_RS07985 PF01435 Peptidase family M48 H1D55_RS07995 PF00873 AcrB/AcrD/AcrF family H1D55_RS08000 PF03009 Glycerophosphoryl diester phosphodiesterase family H1D55_RS08005 PF00753 Metallo-beta-lactamase superfamily H1D55_RS08010 PF01219 Prokaryotic diacylglycerol kinase H1D55_RS08015 PF00118 TCP-1/cpn60 chaperonin family H1D55_RS08020 PF00166 Chaperonin 10 Kd subunit H1D55_RS08030 PF00149 Calcineurin-like phosphoesterase H1D55_RS08035 PF00781 Diacylglycerol kinase catalytic domain H1D55_RS08040 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain H1D55_RS08040 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain H1D55_RS08045 PF01266 FAD dependent oxidoreductase H1D55_RS08045 PF16901 C-terminal domain of alpha-glycerophosphate oxidase H1D55_RS08050 PF02782 FGGY family of carbohydrate kinases, C-terminal domain H1D55_RS08050 PF00370 FGGY family of carbohydrate kinases, N-terminal domain H1D55_RS08055 PF00083 Sugar (and other) transporter H1D55_RS08070 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain H1D55_RS08070 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain H1D55_RS08085 PF09423 PhoD-like phosphatase H1D55_RS08085 PF16655 PhoD-like phosphatase, N-terminal domain H1D55_RS08105 PF00809 Pterin binding enzyme H1D55_RS08110 PF00004 ATPase family associated with various cellular activities (AAA) H1D55_RS08110 PF17862 AAA+ lid domain H1D55_RS08110 PF06480 FtsH Extracellular H1D55_RS08110 PF01434 Peptidase family M41 H1D55_RS08115 PF01728 FtsJ-like methyltransferase H1D55_RS08120 PF01985 CRS1 / YhbY (CRM) domain H1D55_RS08135 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain H1D55_RS08135 PF00117 Glutamine amidotransferase class-I H1D55_RS08140 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain H1D55_RS08140 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain H1D55_RS08140 PF02142 MGS-like domain H1D55_RS08145 PF01272 Transcription elongation factor, GreA/GreB, C-term H1D55_RS08145 PF03449 Transcription elongation factor, N-terminal H1D55_RS08150 PF00132 Bacterial transferase hexapeptide (six repeats) H1D55_RS08155 PF00582 Universal stress protein family H1D55_RS08160 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain H1D55_RS08170 PF09587 Bacterial capsule synthesis protein PGA_cap H1D55_RS08185 PF00999 Sodium/hydrogen exchanger family H1D55_RS08190 PF04228 Putative neutral zinc metallopeptidase H1D55_RS08195 PF05661 Protein of unknown function (DUF808) H1D55_RS08200 PF00579 tRNA synthetases class I (W and Y) H1D55_RS08205 PF00549 CoA-ligase H1D55_RS08205 PF02629 CoA binding domain H1D55_RS08210 PF00549 CoA-ligase H1D55_RS08210 PF08442 ATP-grasp domain H1D55_RS08215 PF07992 Pyridine nucleotide-disulphide oxidoreductase H1D55_RS08215 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H1D55_RS08220 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) H1D55_RS08220 PF00364 Biotin-requiring enzyme H1D55_RS08220 PF02817 e3 binding domain H1D55_RS08225 PF16078 2-oxoglutarate dehydrogenase N-terminus H1D55_RS08225 PF16870 2-oxoglutarate dehydrogenase C-terminal H1D55_RS08225 PF00676 Dehydrogenase E1 component H1D55_RS08225 PF02779 Transketolase, pyrimidine binding domain H1D55_RS08240 PF13085 2Fe-2S iron-sulfur cluster binding domain H1D55_RS08245 PF00890 FAD binding domain H1D55_RS08245 PF02910 Fumarate reductase flavoprotein C-term H1D55_RS08250 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit H1D55_RS08255 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit H1D55_RS08260 PF00285 Citrate synthase, C-terminal domain H1D55_RS08270 PF00581 Rhodanese-like domain H1D55_RS08270 PF17773 UPF0176 acylphosphatase like domain H1D55_RS08285 PF04545 Sigma-70, region 4 H1D55_RS08285 PF04546 Sigma-70, non-essential region H1D55_RS08285 PF04542 Sigma-70 region 2 H1D55_RS08285 PF04539 Sigma-70 region 3 H1D55_RS08285 PF00140 Sigma-70 factor, region 1.2 H1D55_RS08285 PF03979 Sigma-70 factor, region 1.1 H1D55_RS08290 PF04359 Protein of unknown function (DUF493) H1D55_RS08295 PF03099 Biotin/lipoate A/B protein ligase family H1D55_RS08305 PF00465 Iron-containing alcohol dehydrogenase H1D55_RS08310 PF13520 Amino acid permease H1D55_RS08315 PF03358 NADPH-dependent FMN reductase H1D55_RS08325 PF00588 SpoU rRNA Methylase family H1D55_RS08330 PF10414 Sirohaem synthase dimerisation region H1D55_RS08330 PF14824 Sirohaem biosynthesis protein central H1D55_RS08330 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases H1D55_RS08335 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) H1D55_RS08335 PF02403 Seryl-tRNA synthetase N-terminal domain H1D55_RS08345 PF03548 Outer membrane lipoprotein carrier protein LolA H1D55_RS08350 PF01016 Ribosomal L27 protein H1D55_RS08355 PF00829 Ribosomal prokaryotic L21 protein H1D55_RS08365 PF00348 Polyprenyl synthetase H1D55_RS08375 PF01569 PAP2 superfamily H1D55_RS08380 PF00529 HlyD membrane-fusion protein of T1SS H1D55_RS08380 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H1D55_RS08385 PF00873 AcrB/AcrD/AcrF family H1D55_RS08390 PF02321 Outer membrane efflux protein H1D55_RS08395 PF01906 Putative heavy-metal-binding H1D55_RS08400 PF01906 Putative heavy-metal-binding H1D55_RS08420 PF08264 Anticodon-binding domain of tRNA H1D55_RS08420 PF00133 tRNA synthetases class I (I, L, M and V) H1D55_RS08420 PF10458 Valyl tRNA synthetase tRNA binding arm H1D55_RS08440 PF03466 LysR substrate binding domain H1D55_RS08440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H1D55_RS08445 PF00909 Ammonium Transporter Family H1D55_RS08460 PF00512 His Kinase A (phospho-acceptor) domain H1D55_RS08460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H1D55_RS08460 PF08521 Two-component sensor kinase N-terminal H1D55_RS08465 PF00072 Response regulator receiver domain H1D55_RS08465 PF00486 Transcriptional regulatory protein, C terminal H1D55_RS08470 PF00884 Sulfatase H1D55_RS08470 PF08019 Phosphoethanolamine transferase EptA/EptB H1D55_RS08490 PF01734 Patatin-like phospholipase H1D55_RS08500 PF01145 SPFH domain / Band 7 family H1D55_RS08505 PF04237 YjbR H1D55_RS08510 PF00348 Polyprenyl synthetase H1D55_RS08515 PF04303 PrpF protein H1D55_RS08520 PF00324 Amino acid permease H1D55_RS08530 PF01965 DJ-1/PfpI family H1D55_RS08535 PF08240 Alcohol dehydrogenase GroES-like domain H1D55_RS08535 PF09277 Erythronolide synthase, docking H1D55_RS08535 PF16197 Ketoacyl-synthetase C-terminal extension H1D55_RS08535 PF00109 Beta-ketoacyl synthase, N-terminal domain H1D55_RS08535 PF02801 Beta-ketoacyl synthase, C-terminal domain H1D55_RS08535 PF08659 KR domain H1D55_RS08535 PF00550 Phosphopantetheine attachment site H1D55_RS08535 PF14765 Polyketide synthase dehydratase H1D55_RS08535 PF08990 Erythronolide synthase docking H1D55_RS08535 PF00698 Acyl transferase domain H1D55_RS08540 PF12833 Helix-turn-helix domain H1D55_RS08540 PF06719 AraC-type transcriptional regulator N-terminus H1D55_RS08545 PF02673 Bacitracin resistance protein BacA H1D55_RS08565 PF02525 Flavodoxin-like fold H1D55_RS08580 PF01507 Phosphoadenosine phosphosulfate reductase family H1D55_RS08585 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain H1D55_RS08585 PF06974 Protein of unknown function (DUF1298) H1D55_RS08595 PF00575 S1 RNA binding domain H1D55_RS08595 PF10150 Ribonuclease E/G family H1D55_RS08600 PF02545 Maf-like protein H1D55_RS08605 PF04093 rod shape-determining protein MreD H1D55_RS08610 PF04085 rod shape-determining protein MreC H1D55_RS08620 PF02686 Glu-tRNAGln amidotransferase C subunit H1D55_RS08625 PF01425 Amidase H1D55_RS08630 PF02637 GatB domain H1D55_RS08630 PF02934 GatB/GatE catalytic domain H1D55_RS08655 PF05992 SbmA/BacA-like family H1D55_RS08660 PF13291 ACT domain H1D55_RS08660 PF00291 Pyridoxal-phosphate dependent enzyme H1D55_RS08665 PF01734 Patatin-like phospholipase H1D55_RS08670 PF01235 Sodium:alanine symporter family H1D55_RS08685 PF00881 Nitroreductase family H1D55_RS08690 PF07690 Major Facilitator Superfamily H1D55_RS08695 PF12805 FUSC-like inner membrane protein yccS H1D55_RS08705 PF00667 FAD binding domain H1D55_RS08705 PF00258 Flavodoxin H1D55_RS08705 PF00175 Oxidoreductase NAD-binding domain H1D55_RS08745 PF17969 L,D-transpeptidase C-terminal domain H1D55_RS08745 PF03734 L,D-transpeptidase catalytic domain H1D55_RS08750 PF04304 Protein of unknown function (DUF454) H1D55_RS08760 PF08085 Entericidin EcnA/B family H1D55_RS08765 PF07687 Peptidase dimerisation domain H1D55_RS08765 PF01546 Peptidase family M20/M25/M40 H1D55_RS08775 PF01584 CheW-like domain H1D55_RS08775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H1D55_RS08775 PF01627 Hpt domain H1D55_RS08775 PF00072 Response regulator receiver domain H1D55_RS08780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H1D55_RS08780 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term H1D55_RS08785 PF01584 CheW-like domain H1D55_RS08790 PF00072 Response regulator receiver domain H1D55_RS08795 PF00072 Response regulator receiver domain H1D55_RS08810 PF00873 AcrB/AcrD/AcrF family H1D55_RS08815 PF03129 Anticodon binding domain H1D55_RS08815 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) H1D55_RS08815 PF04073 Aminoacyl-tRNA editing domain H1D55_RS08820 PF07411 Domain of unknown function (DUF1508) H1D55_RS08825 PF08274 PhnA Zinc-Ribbon H1D55_RS08825 PF03831 PhnA domain H1D55_RS08830 PF04343 Protein of unknown function, DUF488 H1D55_RS08840 PF01571 Aminomethyltransferase folate-binding domain H1D55_RS08845 PF10411 Disulfide bond isomerase protein N-terminus H1D55_RS08845 PF13098 Thioredoxin-like domain H1D55_RS08855 PF03547 Membrane transport protein H1D55_RS08860 PF00724 NADH:flavin oxidoreductase / NADH oxidase family H1D55_RS08865 PF00593 TonB dependent receptor H1D55_RS08865 PF07715 TonB-dependent Receptor Plug Domain H1D55_RS08870 PF02245 Methylpurine-DNA glycosylase (MPG) H1D55_RS08875 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain H1D55_RS08875 PF06827 Zinc finger found in FPG and IleRS H1D55_RS08875 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain H1D55_RS08890 PF01741 Large-conductance mechanosensitive channel, MscL H1D55_RS08895 PF00679 Elongation factor G C-terminus H1D55_RS08895 PF00009 Elongation factor Tu GTP binding domain H1D55_RS08895 PF03144 Elongation factor Tu domain 2 H1D55_RS08900 PF00860 Permease family H1D55_RS08905 PF08468 Methyltransferase small domain N-terminal H1D55_RS08905 PF05175 Methyltransferase small domain H1D55_RS08910 PF00324 Amino acid permease H1D55_RS08915 PF01139 tRNA-splicing ligase RtcB H1D55_RS08925 PF00691 OmpA family H1D55_RS08925 PF13505 Outer membrane protein beta-barrel domain H1D55_RS08935 PF00108 Thiolase, N-terminal domain H1D55_RS08935 PF02803 Thiolase, C-terminal domain H1D55_RS08945 PF00893 Small Multidrug Resistance protein H1D55_RS08955 PF01077 Nitrite and sulphite reductase 4Fe-4S domain H1D55_RS08955 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain H1D55_RS08960 PF01011 PQQ enzyme repeat H1D55_RS08965 PF04966 Carbohydrate-selective porin, OprB family H1D55_RS08970 PF02515 CoA-transferase family III H1D55_RS08975 PF12833 Helix-turn-helix domain H1D55_RS08975 PF02311 AraC-like ligand binding domain H1D55_RS08980 PF02803 Thiolase, C-terminal domain H1D55_RS08980 PF00108 Thiolase, N-terminal domain H1D55_RS08985 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain H1D55_RS08985 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain H1D55_RS08985 PF00378 Enoyl-CoA hydratase/isomerase H1D55_RS09010 PF03006 Haemolysin-III related H1D55_RS09015 PF00083 Sugar (and other) transporter H1D55_RS09015 PF07690 Major Facilitator Superfamily H1D55_RS09025 PF07516 SecA Wing and Scaffold domain H1D55_RS09025 PF01043 SecA preprotein cross-linking domain H1D55_RS09025 PF07517 SecA DEAD-like domain H1D55_RS09025 PF02810 SEC-C motif H1D55_RS09030 PF00578 AhpC/TSA family H1D55_RS09030 PF10417 C-terminal domain of 1-Cys peroxiredoxin H1D55_RS09035 PF00753 Metallo-beta-lactamase superfamily H1D55_RS09050 PF02875 Mur ligase family, glutamate ligase domain H1D55_RS09050 PF08245 Mur ligase middle domain H1D55_RS09055 PF01039 Carboxyl transferase domain H1D55_RS09060 PF00290 Tryptophan synthase alpha chain H1D55_RS09085 PF00291 Pyridoxal-phosphate dependent enzyme H1D55_RS09090 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase H1D55_RS09095 PF00593 TonB dependent receptor H1D55_RS09095 PF07715 TonB-dependent Receptor Plug Domain H1D55_RS09100 PF01923 Cobalamin adenosyltransferase H1D55_RS09120 PF02696 Uncharacterized ACR, YdiU/UPF0061 family H1D55_RS09125 PF00072 Response regulator receiver domain H1D55_RS09125 PF00486 Transcriptional regulatory protein, C terminal H1D55_RS09130 PF00672 HAMP domain H1D55_RS09130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H1D55_RS09130 PF00512 His Kinase A (phospho-acceptor) domain H1D55_RS09140 PF12806 Acetyl-CoA dehydrogenase C-terminal like H1D55_RS09140 PF02770 Acyl-CoA dehydrogenase, middle domain H1D55_RS09140 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H1D55_RS09140 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H1D55_RS09145 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H1D55_RS09145 PF02770 Acyl-CoA dehydrogenase, middle domain H1D55_RS09145 PF12806 Acetyl-CoA dehydrogenase C-terminal like H1D55_RS09145 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H1D55_RS09150 PF03466 LysR substrate binding domain H1D55_RS09150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H1D55_RS09155 PF02798 Glutathione S-transferase, N-terminal domain H1D55_RS09155 PF00043 Glutathione S-transferase, C-terminal domain H1D55_RS09160 PF06146 Phosphate-starvation-inducible E H1D55_RS09180 PF00593 TonB dependent receptor H1D55_RS09180 PF07715 TonB-dependent Receptor Plug Domain H1D55_RS09190 PF02938 GAD domain H1D55_RS09190 PF00152 tRNA synthetases class II (D, K and N) H1D55_RS09190 PF01336 OB-fold nucleic acid binding domain H1D55_RS09195 PF17101 Stealth protein CR1, conserved region 1 H1D55_RS09195 PF11380 Stealth protein CR2, conserved region 2 H1D55_RS09195 PF17102 Stealth protein CR3, conserved region 3 H1D55_RS09220 PF13439 Glycosyltransferase Family 4 H1D55_RS09220 PF00534 Glycosyl transferases group 1 H1D55_RS09225 PF00535 Glycosyl transferase family 2 H1D55_RS09230 PF01522 Polysaccharide deacetylase H1D55_RS09245 PF01063 Amino-transferase class IV H1D55_RS09250 PF08335 GlnD PII-uridylyltransferase H1D55_RS09250 PF03710 Glutamate-ammonia ligase adenylyltransferase H1D55_RS09255 PF00512 His Kinase A (phospho-acceptor) domain H1D55_RS09255 PF07689 KaiB domain H1D55_RS09255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H1D55_RS09355 PF13356 Arm DNA-binding domain H1D55_RS09355 PF00589 Phage integrase family H1D55_RS09365 PF02547 Queuosine biosynthesis protein H1D55_RS09385 PF01702 Queuine tRNA-ribosyltransferase H1D55_RS09390 PF02699 Preprotein translocase subunit H1D55_RS09395 PF07549 SecD/SecF GG Motif H1D55_RS09395 PF13721 SecD export protein N-terminal TM region H1D55_RS09395 PF02355 Protein export membrane protein H1D55_RS09400 PF07549 SecD/SecF GG Motif H1D55_RS09400 PF02355 Protein export membrane protein H1D55_RS09405 PF04127 DNA / pantothenate metabolism flavoprotein H1D55_RS09405 PF02441 Flavoprotein H1D55_RS09410 PF04002 RadC-like JAB domain H1D55_RS09415 PF01062 Bestrophin, RFP-TM, chloride channel H1D55_RS09420 PF02811 PHP domain H1D55_RS09425 PF04279 Intracellular septation protein A H1D55_RS09430 PF03795 YCII-related domain H1D55_RS09440 PF01266 FAD dependent oxidoreductase H1D55_RS09440 PF05430 S-adenosyl-L-methionine-dependent methyltransferase H1D55_RS09450 PF04461 Protein of unknown function (DUF520) H1D55_RS09460 PF03061 Thioesterase superfamily H1D55_RS09465 PF00085 Thioredoxin H1D55_RS09470 PF00561 alpha/beta hydrolase fold H1D55_RS09475 PF04273 Putative phosphatase (DUF442) H1D55_RS09475 PF00753 Metallo-beta-lactamase superfamily H1D55_RS09485 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H1D55_RS09485 PF07992 Pyridine nucleotide-disulphide oxidoreductase H1D55_RS09520 PF00990 Diguanylate cyclase, GGDEF domain H1D55_RS09520 PF17152 Periplasmic sensor domain H1D55_RS09525 PF00691 OmpA family H1D55_RS09525 PF01389 OmpA-like transmembrane domain H1D55_RS09530 PF00149 Calcineurin-like phosphoesterase H1D55_RS09530 PF10518 TAT (twin-arginine translocation) pathway signal sequence H1D55_RS09535 PF13091 PLD-like domain H1D55_RS09545 PF16360 GTP-binding GTPase Middle Region H1D55_RS09545 PF13167 GTP-binding GTPase N-terminal H1D55_RS09545 PF01926 50S ribosome-binding GTPase H1D55_RS09565 PF00149 Calcineurin-like phosphoesterase H1D55_RS09570 PF00398 Ribosomal RNA adenine dimethylase H1D55_RS09575 PF04166 Pyridoxal phosphate biosynthetic protein PdxA H1D55_RS09580 PF00572 Ribosomal protein L13 H1D55_RS09585 PF00380 Ribosomal protein S9/S16 H1D55_RS09590 PF00043 Glutathione S-transferase, C-terminal domain H1D55_RS09590 PF13417 Glutathione S-transferase, N-terminal domain H1D55_RS09595 PF04386 Stringent starvation protein B H1D55_RS09605 PF02785 Biotin carboxylase C-terminal domain H1D55_RS09605 PF00289 Biotin carboxylase, N-terminal domain H1D55_RS09605 PF00364 Biotin-requiring enzyme H1D55_RS09605 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain H1D55_RS09610 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain H1D55_RS09610 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain H1D55_RS09610 PF00378 Enoyl-CoA hydratase/isomerase H1D55_RS09615 PF02770 Acyl-CoA dehydrogenase, middle domain H1D55_RS09615 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H1D55_RS09615 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H1D55_RS09620 PF01039 Carboxyl transferase domain H1D55_RS09635 PF00440 Bacterial regulatory proteins, tetR family H1D55_RS09635 PF17932 Tetracyclin repressor-like, C-terminal domain H1D55_RS09640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H1D55_RS09640 PF02770 Acyl-CoA dehydrogenase, middle domain H1D55_RS09640 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H1D55_RS09685 PF01066 CDP-alcohol phosphatidyltransferase H1D55_RS09690 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ H1D55_RS09710 PF00056 lactate/malate dehydrogenase, NAD binding domain H1D55_RS09710 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain H1D55_RS09720 PF01551 Peptidase family M23 H1D55_RS09720 PF10145 Phage-related minor tail protein H1D55_RS09720 PF01464 Transglycosylase SLT domain H1D55_RS09725 PF00919 Uncharacterized protein family UPF0004 H1D55_RS09725 PF04055 Radical SAM superfamily H1D55_RS09725 PF01938 TRAM domain H1D55_RS09730 PF02562 PhoH-like protein H1D55_RS09735 PF02130 Uncharacterized protein family UPF0054 H1D55_RS09760 PF03358 NADPH-dependent FMN reductase H1D55_RS09765 PF03631 Virulence factor BrkB H1D55_RS09770 PF00892 EamA-like transporter family H1D55_RS09775 PF12833 Helix-turn-helix domain H1D55_RS09780 PF01557 Fumarylacetoacetate (FAA) hydrolase family H1D55_RS09825 PF00575 S1 RNA binding domain H1D55_RS09825 PF17876 Cold shock domain H1D55_RS09825 PF08206 Ribonuclease B OB domain H1D55_RS09825 PF08461 Ribonuclease R winged-helix domain H1D55_RS09825 PF00773 RNB domain H1D55_RS09830 PF01432 Peptidase family M3 H1D55_RS09835 PF09526 Probable metal-binding protein (DUF2387) H1D55_RS09865 PF03937 Flavinator of succinate dehydrogenase H1D55_RS09870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H1D55_RS09870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H1D55_RS09870 PF02770 Acyl-CoA dehydrogenase, middle domain H1D55_RS09875 PF00743 Flavin-binding monooxygenase-like H1D55_RS09880 PF01196 Ribosomal protein L17 H1D55_RS09885 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain H1D55_RS09885 PF01000 RNA polymerase Rpb3/RpoA insert domain H1D55_RS09885 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain H1D55_RS09890 PF00163 Ribosomal protein S4/S9 N-terminal domain H1D55_RS09890 PF01479 S4 domain H1D55_RS09895 PF00411 Ribosomal protein S11 H1D55_RS09900 PF00416 Ribosomal protein S13/S18 H1D55_RS09905 PF00444 Ribosomal protein L36 H1D55_RS09910 PF00344 SecY translocase H1D55_RS09915 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A H1D55_RS09920 PF00327 Ribosomal protein L30p/L7e H1D55_RS09925 PF00333 Ribosomal protein S5, N-terminal domain H1D55_RS09925 PF03719 Ribosomal protein S5, C-terminal domain H1D55_RS09930 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast H1D55_RS09935 PF00347 Ribosomal protein L6 H1D55_RS09940 PF00410 Ribosomal protein S8 H1D55_RS09945 PF00253 Ribosomal protein S14p/S29e H1D55_RS09950 PF00281 Ribosomal protein L5 H1D55_RS09950 PF00673 ribosomal L5P family C-terminus H1D55_RS09955 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 H1D55_RS09955 PF00467 KOW motif H1D55_RS09960 PF00238 Ribosomal protein L14p/L23e H1D55_RS09965 PF00366 Ribosomal protein S17 H1D55_RS09970 PF00831 Ribosomal L29 protein H1D55_RS09975 PF00252 Ribosomal protein L16p/L10e H1D55_RS09985 PF00237 Ribosomal protein L22p/L17e H1D55_RS09990 PF00203 Ribosomal protein S19 H1D55_RS09995 PF00181 Ribosomal Proteins L2, RNA binding domain H1D55_RS09995 PF03947 Ribosomal Proteins L2, C-terminal domain H1D55_RS10000 PF00276 Ribosomal protein L23 H1D55_RS10005 PF00573 Ribosomal protein L4/L1 family H1D55_RS10010 PF00297 Ribosomal protein L3 H1D55_RS10015 PF00338 Ribosomal protein S10p/S20e H1D55_RS10020 PF00117 Glutamine amidotransferase class-I H1D55_RS10025 PF01053 Cys/Met metabolism PLP-dependent enzyme H1D55_RS10030 PF05872 Bacterial protein of unknown function (DUF853) H1D55_RS10035 PF00970 Oxidoreductase FAD-binding domain H1D55_RS10035 PF00042 Globin H1D55_RS10035 PF00175 Oxidoreductase NAD-binding domain H1D55_RS10040 PF02082 Transcriptional regulator H1D55_RS10045 PF01926 50S ribosome-binding GTPase H1D55_RS10055 PF00375 Sodium:dicarboxylate symporter family H1D55_RS10065 PF01553 Acyltransferase H1D55_RS10080 PF17191 RecG wedge domain H1D55_RS10080 PF00271 Helicase conserved C-terminal domain H1D55_RS10080 PF00270 DEAD/DEAH box helicase H1D55_RS10085 PF00156 Phosphoribosyl transferase domain H1D55_RS10090 PF00293 NUDIX domain H1D55_RS10095 PF03641 Possible lysine decarboxylase H1D55_RS10100 PF01544 CorA-like Mg2+ transporter protein H1D55_RS10110 PF05494 MlaC protein H1D55_RS10120 PF02405 Permease MlaE H1D55_RS10125 PF00005 ABC transporter H1D55_RS10135 PF03880 DbpA RNA binding domain H1D55_RS10135 PF00270 DEAD/DEAH box helicase H1D55_RS10135 PF12343 Cold shock protein DEAD box A H1D55_RS10135 PF00271 Helicase conserved C-terminal domain H1D55_RS10140 PF00459 Inositol monophosphatase family H1D55_RS10145 PF02780 Transketolase, C-terminal domain H1D55_RS10145 PF02779 Transketolase, pyrimidine binding domain H1D55_RS10145 PF13292 1-deoxy-D-xylulose-5-phosphate synthase H1D55_RS10150 PF00925 GTP cyclohydrolase II H1D55_RS10155 PF01218 Coproporphyrinogen III oxidase H1D55_RS10160 PF18317 Shikimate 5'-dehydrogenase C-terminal domain H1D55_RS10160 PF01488 Shikimate / quinate 5-dehydrogenase H1D55_RS10160 PF08501 Shikimate dehydrogenase substrate binding domain H1D55_RS10170 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H1D55_RS10170 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H1D55_RS10170 PF02770 Acyl-CoA dehydrogenase, middle domain H1D55_RS10170 PF12806 Acetyl-CoA dehydrogenase C-terminal like H1D55_RS10180 PF04024 PspC domain H1D55_RS10185 PF00571 CBS domain H1D55_RS10200 PF07690 Major Facilitator Superfamily H1D55_RS10205 PF02091 Glycyl-tRNA synthetase alpha subunit H1D55_RS10210 PF05746 DALR anticodon binding domain H1D55_RS10210 PF02092 Glycyl-tRNA synthetase beta subunit H1D55_RS10220 PF00892 EamA-like transporter family H1D55_RS10225 PF03466 LysR substrate binding domain H1D55_RS10225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H1D55_RS10240 PF05922 Peptidase inhibitor I9 H1D55_RS10240 PF00082 Subtilase family H1D55_RS10255 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family H1D55_RS10260 PF04996 Succinylarginine dihydrolase H1D55_RS10265 PF00171 Aldehyde dehydrogenase family H1D55_RS10270 PF04958 Arginine N-succinyltransferase beta subunit H1D55_RS10275 PF00202 Aminotransferase class-III H1D55_RS10280 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain H1D55_RS10280 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase H1D55_RS10285 PF00324 Amino acid permease H1D55_RS10295 PF08241 Methyltransferase domain H1D55_RS10315 PF13614 AAA domain H1D55_RS10320 PF01594 AI-2E family transporter H1D55_RS10325 PF00080 Copper/zinc superoxide dismutase (SODC) H1D55_RS10330 PF12805 FUSC-like inner membrane protein yccS H1D55_RS10335 PF07690 Major Facilitator Superfamily H1D55_RS10345 PF02525 Flavodoxin-like fold H1D55_RS10350 PF03992 Antibiotic biosynthesis monooxygenase H1D55_RS10360 PF01565 FAD binding domain H1D55_RS10360 PF02913 FAD linked oxidases, C-terminal domain H1D55_RS10365 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H1D55_RS10365 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H1D55_RS10370 PF00892 EamA-like transporter family H1D55_RS10375 PF00892 EamA-like transporter family H1D55_RS10385 PF01925 Sulfite exporter TauE/SafE H1D55_RS10390 PF09157 Pseudouridine synthase II TruB, C-terminal H1D55_RS10390 PF16198 tRNA pseudouridylate synthase B C-terminal domain H1D55_RS10390 PF01509 TruB family pseudouridylate synthase (N terminal domain) H1D55_RS10395 PF03280 Proteobacterial lipase chaperone protein H1D55_RS10400 PF00561 alpha/beta hydrolase fold H1D55_RS10405 PF01245 Ribosomal protein L19 H1D55_RS10410 PF01746 tRNA (Guanine-1)-methyltransferase H1D55_RS10415 PF01782 RimM N-terminal domain H1D55_RS10415 PF05239 PRC-barrel domain H1D55_RS10420 PF00886 Ribosomal protein S16 H1D55_RS10460 PF02401 LytB protein H1D55_RS10465 PF00625 Guanylate kinase H1D55_RS10470 PF01192 RNA polymerase Rpb6 H1D55_RS10480 PF02824 TGS domain H1D55_RS10480 PF04607 Region found in RelA / SpoT proteins H1D55_RS10480 PF13291 ACT domain H1D55_RS10485 PF01042 Endoribonuclease L-PSP H1D55_RS10490 PF04324 BFD-like [2Fe-2S] binding domain H1D55_RS10495 PF00210 Ferritin-like domain H1D55_RS10500 PF15864 Protein glycosylation ligase H1D55_RS10500 PF04932 O-Antigen ligase H1D55_RS10500 PF11846 Virulence factor membrane-bound polymerase, C-terminal H1D55_RS10510 PF07963 Prokaryotic N-terminal methylation motif H1D55_RS10510 PF00114 Pilin (bacterial filament) H1D55_RS10520 PF04536 TPM domain H1D55_RS10525 PF04011 LemA family H1D55_RS10535 PF07992 Pyridine nucleotide-disulphide oxidoreductase H1D55_RS10535 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster H1D55_RS10540 PF00310 Glutamine amidotransferases class-II H1D55_RS10540 PF01645 Conserved region in glutamate synthase H1D55_RS10540 PF01493 GXGXG motif H1D55_RS10540 PF04898 Glutamate synthase central domain H1D55_RS10550 PF01761 3-dehydroquinate synthase H1D55_RS10555 PF01202 Shikimate kinase H1D55_RS10560 PF11741 AMIN domain H1D55_RS10560 PF00263 Bacterial type II and III secretion system protein H1D55_RS10560 PF03958 Bacterial type II/III secretion system short domain H1D55_RS10560 PF07660 Secretin and TonB N terminus short domain H1D55_RS10570 PF04350 Pilus assembly protein, PilO H1D55_RS10575 PF05137 Fimbrial assembly protein (PilN) H1D55_RS10580 PF11104 Type IV pilus assembly protein PilM; H1D55_RS10585 PF00905 Penicillin binding protein transpeptidase domain H1D55_RS10585 PF17092 Penicillin-binding protein OB-like domain H1D55_RS10585 PF00912 Transglycosylase H1D55_RS10590 PF13847 Methyltransferase domain H1D55_RS10600 PF00953 Glycosyl transferase family 4 H1D55_RS10605 PF01225 Mur ligase family, catalytic domain H1D55_RS10605 PF02875 Mur ligase family, glutamate ligase domain H1D55_RS10605 PF08245 Mur ligase middle domain H1D55_RS10610 PF01225 Mur ligase family, catalytic domain H1D55_RS10610 PF02875 Mur ligase family, glutamate ligase domain H1D55_RS10610 PF08245 Mur ligase middle domain H1D55_RS10615 PF03717 Penicillin-binding Protein dimerisation domain H1D55_RS10615 PF00905 Penicillin binding protein transpeptidase domain H1D55_RS10625 PF01795 MraW methylase family H1D55_RS10640 PF00749 tRNA synthetases class I (E and Q), catalytic domain H1D55_RS10655 PF00324 Amino acid permease H1D55_RS10685 PF01545 Cation efflux family H1D55_RS10690 PF00873 AcrB/AcrD/AcrF family H1D55_RS10695 PF00529 HlyD membrane-fusion protein of T1SS H1D55_RS10695 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H1D55_RS10720 PF00005 ABC transporter H1D55_RS10720 PF12848 ABC transporter H1D55_RS10725 PF01053 Cys/Met metabolism PLP-dependent enzyme H1D55_RS10730 PF00106 short chain dehydrogenase H1D55_RS10735 PF01740 STAS domain H1D55_RS10735 PF00916 Sulfate permease family H1D55_RS10740 PF17674 HHH domain H1D55_RS10740 PF00575 S1 RNA binding domain H1D55_RS10740 PF09371 Tex-like protein N-terminal domain H1D55_RS10740 PF16921 Tex protein YqgF-like domain H1D55_RS10745 PF00072 Response regulator receiver domain H1D55_RS10745 PF00486 Transcriptional regulatory protein, C terminal H1D55_RS10750 PF00512 His Kinase A (phospho-acceptor) domain H1D55_RS10750 PF00672 HAMP domain H1D55_RS10750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H1D55_RS10760 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain H1D55_RS10760 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain H1D55_RS10765 PF00583 Acetyltransferase (GNAT) family H1D55_RS10785 PF00475 Imidazoleglycerol-phosphate dehydratase H1D55_RS10790 PF00117 Glutamine amidotransferase class-I H1D55_RS10805 PF00977 Histidine biosynthesis protein H1D55_RS10830 PF01636 Phosphotransferase enzyme family H1D55_RS10835 PF00977 Histidine biosynthesis protein H1D55_RS10850 PF00230 Major intrinsic protein H1D55_RS10875 PF02705 K+ potassium transporter H1D55_RS10900 PF02525 Flavodoxin-like fold H1D55_RS10905 PF01638 HxlR-like helix-turn-helix H1D55_RS10930 PF02311 AraC-like ligand binding domain H1D55_RS10930 PF12833 Helix-turn-helix domain H1D55_RS10935 PF00248 Aldo/keto reductase family H1D55_RS10955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H1D55_RS10955 PF03466 LysR substrate binding domain H1D55_RS10960 PF07690 Major Facilitator Superfamily H1D55_RS10980 PF01593 Flavin containing amine oxidoreductase H1D55_RS10985 PF02678 Pirin H1D55_RS10985 PF05726 Pirin C-terminal cupin domain H1D55_RS10990 PF00857 Isochorismatase family H1D55_RS10995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H1D55_RS11000 PF00171 Aldehyde dehydrogenase family H1D55_RS11005 PF00202 Aminotransferase class-III H1D55_RS11010 PF00392 Bacterial regulatory proteins, gntR family H1D55_RS11010 PF00155 Aminotransferase class I and II H1D55_RS11015 PF00324 Amino acid permease H1D55_RS11025 PF03591 AzlC protein H1D55_RS11035 PF00436 Single-strand binding protein family H1D55_RS11040 PF07690 Major Facilitator Superfamily H1D55_RS11050 PF03070 TENA/THI-4/PQQC family H1D55_RS11050 PF08543 Phosphomethylpyrimidine kinase H1D55_RS11050 PF02581 Thiamine monophosphate synthase H1D55_RS11055 PF06942 GlpM protein H1D55_RS11065 PF08240 Alcohol dehydrogenase GroES-like domain H1D55_RS11065 PF00107 Zinc-binding dehydrogenase H1D55_RS11070 PF16925 Tetracyclin repressor-like, C-terminal domain H1D55_RS11070 PF00440 Bacterial regulatory proteins, tetR family H1D55_RS11075 PF17755 UvrA DNA-binding domain H1D55_RS11075 PF00005 ABC transporter H1D55_RS11075 PF17760 UvrA interaction domain H1D55_RS11080 PF00990 Diguanylate cyclase, GGDEF domain H1D55_RS11090 PF02028 BCCT, betaine/carnitine/choline family transporter H1D55_RS11100 PF00474 Sodium:solute symporter family H1D55_RS11105 PF04341 Protein of unknown function, DUF485 H1D55_RS11110 PF00672 HAMP domain H1D55_RS11110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H1D55_RS11110 PF00512 His Kinase A (phospho-acceptor) domain H1D55_RS11110 PF01627 Hpt domain H1D55_RS11110 PF00072 Response regulator receiver domain H1D55_RS11120 PF00196 Bacterial regulatory proteins, luxR family H1D55_RS11120 PF00072 Response regulator receiver domain H1D55_RS11125 PF03358 NADPH-dependent FMN reductase H1D55_RS11130 PF00296 Luciferase-like monooxygenase H1D55_RS11135 PF01037 Lrp/AsnC ligand binding domain H1D55_RS11140 PF00857 Isochorismatase family H1D55_RS11145 PF00501 AMP-binding enzyme H1D55_RS11145 PF13193 AMP-binding enzyme C-terminal domain H1D55_RS11145 PF16177 Acetyl-coenzyme A synthetase N-terminus H1D55_RS11155 PF00924 Mechanosensitive ion channel H1D55_RS11160 PF04452 RNA methyltransferase H1D55_RS11165 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) H1D55_RS11170 PF00724 NADH:flavin oxidoreductase / NADH oxidase family H1D55_RS11190 PF01368 DHH family H1D55_RS11190 PF02272 DHHA1 domain H1D55_RS11190 PF17768 RecJ OB domain H1D55_RS11195 PF01243 Pyridoxamine 5'-phosphate oxidase H1D55_RS11195 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region H1D55_RS11200 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain H1D55_RS11200 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III H1D55_RS11200 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I H1D55_RS11200 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II H1D55_RS11205 PF00571 CBS domain H1D55_RS11205 PF00478 IMP dehydrogenase / GMP reductase domain H1D55_RS11210 PF03692 Putative zinc- or iron-chelating domain H1D55_RS11215 PF01613 Flavin reductase like domain H1D55_RS11215 PF00258 Flavodoxin H1D55_RS11220 PF07715 TonB-dependent Receptor Plug Domain H1D55_RS11220 PF00593 TonB dependent receptor H1D55_RS11225 PF01169 Uncharacterized protein family UPF0016 H1D55_RS11235 PF02817 e3 binding domain H1D55_RS11235 PF00364 Biotin-requiring enzyme H1D55_RS11235 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) H1D55_RS11240 PF17831 Pyruvate dehydrogenase E1 component middle domain H1D55_RS11240 PF00456 Transketolase, thiamine diphosphate binding domain H1D55_RS11245 PF01551 Peptidase family M23 H1D55_RS11255 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase H1D55_RS11260 PF12327 FtsZ family, C-terminal domain H1D55_RS11260 PF00091 Tubulin/FtsZ family, GTPase domain H1D55_RS11265 PF02491 SHS2 domain inserted in FTSA H1D55_RS11270 PF03799 Cell division protein FtsQ H1D55_RS11270 PF08478 POTRA domain, FtsQ-type H1D55_RS11275 PF07478 D-ala D-ala ligase C-terminus H1D55_RS11275 PF01820 D-ala D-ala ligase N-terminus H1D55_RS11280 PF01225 Mur ligase family, catalytic domain H1D55_RS11280 PF02875 Mur ligase family, glutamate ligase domain H1D55_RS11280 PF08245 Mur ligase middle domain H1D55_RS11285 PF04101 Glycosyltransferase family 28 C-terminal domain H1D55_RS11285 PF03033 Glycosyltransferase family 28 N-terminal domain H1D55_RS11290 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain H1D55_RS11290 PF02951 Prokaryotic glutathione synthetase, N-terminal domain H1D55_RS11300 PF07715 TonB-dependent Receptor Plug Domain H1D55_RS11300 PF00593 TonB dependent receptor H1D55_RS11305 PF00156 Phosphoribosyl transferase domain H1D55_RS11310 PF03372 Endonuclease/Exonuclease/phosphatase family H1D55_RS11315 PF03960 ArsC family H1D55_RS11325 PF07859 alpha/beta hydrolase fold H1D55_RS11330 PF00990 Diguanylate cyclase, GGDEF domain H1D55_RS11330 PF07694 5TMR of 5TMR-LYT H1D55_RS11335 PF02683 Cytochrome C biogenesis protein transmembrane region H1D55_RS11335 PF11412 Disulphide bond corrector protein DsbC H1D55_RS11365 PF00576 HIUase/Transthyretin family H1D55_RS11370 PF00860 Permease family H1D55_RS11380 PF01494 FAD binding domain H1D55_RS11385 PF03561 Allantoicase repeat H1D55_RS11390 PF04115 Ureidoglycolate lyase H1D55_RS11395 PF00106 short chain dehydrogenase H1D55_RS11400 PF00986 DNA gyrase B subunit, carboxyl terminus H1D55_RS11400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H1D55_RS11400 PF01751 Toprim domain H1D55_RS11400 PF00204 DNA gyrase B H1D55_RS11405 PF05728 Uncharacterised protein family (UPF0227) H1D55_RS11420 PF00182 Chitinase class I H1D55_RS11425 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) H1D55_RS11425 PF04717 Type VI secretion system, phage-baseplate injector H1D55_RS11425 PF13296 Putative type VI secretion system Rhs element Vgr H1D55_RS11430 PF02600 Disulfide bond formation protein DsbB H1D55_RS11435 PF04262 Glutamate-cysteine ligase H1D55_RS11450 PF04286 Protein of unknown function (DUF445) H1D55_RS11455 PF00155 Aminotransferase class I and II H1D55_RS11460 PF01554 MatE H1D55_RS11465 PF00106 short chain dehydrogenase H1D55_RS11475 PF00072 Response regulator receiver domain H1D55_RS11475 PF00486 Transcriptional regulatory protein, C terminal H1D55_RS11480 PF11808 Phosphate regulon sensor protein PhoR H1D55_RS11480 PF00989 PAS fold H1D55_RS11480 PF00512 His Kinase A (phospho-acceptor) domain H1D55_RS11480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H1D55_RS11490 PF02666 Phosphatidylserine decarboxylase H1D55_RS11495 PF00581 Rhodanese-like domain H1D55_RS11500 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain H1D55_RS11500 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family H1D55_RS11510 PF00199 Catalase H1D55_RS11510 PF06628 Catalase-related immune-responsive H1D55_RS11515 PF02580 D-Tyr-tRNA(Tyr) deacylase H1D55_RS11540 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase H1D55_RS11540 PF00925 GTP cyclohydrolase II H1D55_RS11545 PF00885 6,7-dimethyl-8-ribityllumazine synthase H1D55_RS11550 PF01029 NusB family H1D55_RS11555 PF02769 AIR synthase related protein, C-terminal domain H1D55_RS11555 PF00586 AIR synthase related protein, N-terminal domain H1D55_RS11560 PF04608 Phosphatidylglycerophosphatase A H1D55_RS11565 PF14602 Hexapeptide repeat of succinyl-transferase H1D55_RS11565 PF12804 MobA-like NTP transferase domain H1D55_RS11565 PF00132 Bacterial transferase hexapeptide (six repeats) H1D55_RS11570 PF01380 SIS domain H1D55_RS11575 PF01177 Asp/Glu/Hydantoin racemase H1D55_RS11580 PF13419 Haloacid dehalogenase-like hydrolase H1D55_RS11590 PF00491 Arginase family H1D55_RS11595 PF01979 Amidohydrolase family H1D55_RS11600 PF00324 Amino acid permease H1D55_RS11605 PF00221 Aromatic amino acid lyase H1D55_RS11610 PF17392 Urocanase C-terminal domain H1D55_RS11610 PF01175 Urocanase Rossmann-like domain H1D55_RS11610 PF17391 Urocanase N-terminal domain H1D55_RS11615 PF05962 HutD H1D55_RS11620 PF00392 Bacterial regulatory proteins, gntR family H1D55_RS11620 PF07702 UTRA domain H1D55_RS11630 PF02492 CobW/HypB/UreG, nucleotide-binding domain H1D55_RS11630 PF07683 Cobalamin synthesis protein cobW C-terminal domain H1D55_RS11640 PF00324 Amino acid permease H1D55_RS11650 PF02798 Glutathione S-transferase, N-terminal domain H1D55_RS11650 PF14497 Glutathione S-transferase, C-terminal domain H1D55_RS11655 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H1D55_RS11665 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H1D55_RS11670 PF04463 Protein of unknown function (DUF523) H1D55_RS11680 PF01758 Sodium Bile acid symporter family H1D55_RS11685 PF00857 Isochorismatase family H1D55_RS11690 PF00701 Dihydrodipicolinate synthetase family H1D55_RS11700 PF01259 SAICAR synthetase H1D55_RS11710 PF01226 Formate/nitrite transporter H1D55_RS11715 PF00004 ATPase family associated with various cellular activities (AAA) H1D55_RS11715 PF16193 AAA C-terminal domain H1D55_RS11715 PF12002 MgsA AAA+ ATPase C terminal H1D55_RS11720 PF07995 Glucose / Sorbosone dehydrogenase H1D55_RS11725 PF03692 Putative zinc- or iron-chelating domain H1D55_RS11730 PF07043 Protein of unknown function (DUF1328) H1D55_RS11745 PF14815 NUDIX domain H1D55_RS11745 PF00730 HhH-GPD superfamily base excision DNA repair protein H1D55_RS11745 PF00633 Helix-hairpin-helix motif H1D55_RS11745 PF10576 Iron-sulfur binding domain of endonuclease III H1D55_RS11760 PF03352 Methyladenine glycosylase H1D55_RS11765 PF08240 Alcohol dehydrogenase GroES-like domain H1D55_RS11765 PF00107 Zinc-binding dehydrogenase H1D55_RS11770 PF00155 Aminotransferase class I and II H1D55_RS11770 PF00392 Bacterial regulatory proteins, gntR family H1D55_RS11785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H1D55_RS11785 PF03466 LysR substrate binding domain H1D55_RS11790 PF00248 Aldo/keto reductase family H1D55_RS11795 PF07690 Major Facilitator Superfamily H1D55_RS11805 PF05173 Dihydrodipicolinate reductase, C-terminus H1D55_RS11805 PF01113 Dihydrodipicolinate reductase, N-terminus H1D55_RS11815 PF00226 DnaJ domain H1D55_RS11815 PF00684 DnaJ central domain H1D55_RS11815 PF01556 DnaJ C terminal domain H1D55_RS11825 PF00873 AcrB/AcrD/AcrF family H1D55_RS11830 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H1D55_RS11835 PF00440 Bacterial regulatory proteins, tetR family H1D55_RS11835 PF08361 MAATS-type transcriptional repressor, C-terminal region H1D55_RS11840 PF00311 Phosphoenolpyruvate carboxylase H1D55_RS11845 PF00860 Permease family H1D55_RS11850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H1D55_RS11850 PF03466 LysR substrate binding domain H1D55_RS11865 PF00920 Dehydratase family H1D55_RS11870 PF02911 Formyl transferase, C-terminal domain H1D55_RS11870 PF00551 Formyl transferase H1D55_RS11875 PF01189 16S rRNA methyltransferase RsmB/F H1D55_RS11875 PF01029 NusB family H1D55_RS11885 PF00209 Sodium:neurotransmitter symporter family H1D55_RS11895 PF02798 Glutathione S-transferase, N-terminal domain H1D55_RS11895 PF00043 Glutathione S-transferase, C-terminal domain H1D55_RS11925 PF00579 tRNA synthetases class I (W and Y) H1D55_RS11930 PF03702 Anhydro-N-acetylmuramic acid kinase H1D55_RS11935 PF00561 alpha/beta hydrolase fold H1D55_RS11940 PF01521 Iron-sulphur cluster biosynthesis H1D55_RS11960 PF00005 ABC transporter H1D55_RS11960 PF12848 ABC transporter H1D55_RS11965 PF09335 SNARE associated Golgi protein H1D55_RS11975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H1D55_RS11975 PF18053 DNA gyrase B subunit insert domain H1D55_RS11975 PF01751 Toprim domain H1D55_RS11975 PF00204 DNA gyrase B H1D55_RS11975 PF00986 DNA gyrase B subunit, carboxyl terminus H1D55_RS11980 PF02463 RecF/RecN/SMC N terminal domain H1D55_RS11985 PF02768 DNA polymerase III beta subunit, C-terminal domain H1D55_RS11985 PF00712 DNA polymerase III beta subunit, N-terminal domain H1D55_RS11985 PF02767 DNA polymerase III beta subunit, central domain H1D55_RS11990 PF11638 DnaA N-terminal domain H1D55_RS11990 PF08299 Bacterial dnaA protein helix-turn-helix H1D55_RS11990 PF00308 Bacterial dnaA protein H1D55_RS11995 PF00468 Ribosomal protein L34 H1D55_RS12000 PF00825 Ribonuclease P H1D55_RS12005 PF01809 Putative membrane protein insertion efficiency factor H1D55_RS12010 PF14849 YidC periplasmic domain H1D55_RS12010 PF02096 60Kd inner membrane protein H1D55_RS12015 PF10396 GTP-binding protein TrmE N-terminus H1D55_RS12015 PF12631 MnmE helical domain H1D55_RS12015 PF01926 50S ribosome-binding GTPase H1D55_RS12020 PF02583 Metal-sensitive transcriptional repressor H1D55_RS12025 PF01545 Cation efflux family H1D55_RS12025 PF16916 Dimerisation domain of Zinc Transporter H1D55_RS12030 PF10411 Disulfide bond isomerase protein N-terminus H1D55_RS12030 PF13098 Thioredoxin-like domain H1D55_RS12040 PF00156 Phosphoribosyl transferase domain H1D55_RS12045 PF01979 Amidohydrolase family H1D55_RS12050 PF00355 Rieske [2Fe-2S] domain H1D55_RS12055 PF03738 Glutathionylspermidine synthase preATP-grasp H1D55_RS12065 PF03741 Integral membrane protein TerC family H1D55_RS12070 PF01569 PAP2 superfamily H1D55_RS12080 PF01225 Mur ligase family, catalytic domain H1D55_RS12080 PF02875 Mur ligase family, glutamate ligase domain H1D55_RS12080 PF08245 Mur ligase middle domain H1D55_RS12090 PF00731 AIR carboxylase H1D55_RS12095 PF02222 ATP-grasp domain H1D55_RS12095 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain H1D55_RS12100 PF13406 Transglycosylase SLT domain H1D55_RS12120 PF00012 Hsp70 protein H1D55_RS12125 PF01025 GrpE H1D55_RS12130 PF03466 LysR substrate binding domain H1D55_RS12130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H1D55_RS12150 PF07859 alpha/beta hydrolase fold H1D55_RS12155 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD H1D55_RS12195 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H1D55_RS12200 PF01252 Signal peptidase (SPase) II H1D55_RS12205 PF08264 Anticodon-binding domain of tRNA H1D55_RS12205 PF00133 tRNA synthetases class I (I, L, M and V) H1D55_RS12205 PF06827 Zinc finger found in FPG and IleRS H1D55_RS12210 PF06574 FAD synthetase H1D55_RS12210 PF01687 Riboflavin kinase H1D55_RS12220 PF01048 Phosphorylase superfamily H1D55_RS12225 PF08362 YcdC-like protein, C-terminal region H1D55_RS12225 PF00440 Bacterial regulatory proteins, tetR family H1D55_RS12230 PF00005 ABC transporter H1D55_RS12235 PF00528 Binding-protein-dependent transport system inner membrane component H1D55_RS12240 PF00296 Luciferase-like monooxygenase H1D55_RS12245 PF09084 NMT1/THI5 like H1D55_RS12250 PF09084 NMT1/THI5 like H1D55_RS12255 PF00696 Amino acid kinase family H1D55_RS12255 PF00583 Acetyltransferase (GNAT) family H1D55_RS12270 PF00106 short chain dehydrogenase H1D55_RS12275 PF13419 Haloacid dehalogenase-like hydrolase H1D55_RS12285 PF01323 DSBA-like thioredoxin domain H1D55_RS12290 PF08360 QacR-like protein, C-terminal region H1D55_RS12290 PF00440 Bacterial regulatory proteins, tetR family H1D55_RS12295 PF00440 Bacterial regulatory proteins, tetR family H1D55_RS12300 PF00175 Oxidoreductase NAD-binding domain H1D55_RS12305 PF00487 Fatty acid desaturase H1D55_RS12310 PF01138 3' exoribonuclease family, domain 1 H1D55_RS12310 PF03725 3' exoribonuclease family, domain 2 H1D55_RS12315 PF05506 Domain of unknown function (DUF756) H1D55_RS12315 PF04185 Phosphoesterase family H1D55_RS12325 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain H1D55_RS12325 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain H1D55_RS12330 PF01510 N-acetylmuramoyl-L-alanine amidase H1D55_RS12335 PF03023 Lipid II flippase MurJ H1D55_RS12340 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H1D55_RS12340 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase H1D55_RS12345 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase H1D55_RS12345 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H1D55_RS12350 PF02706 Chain length determinant protein H1D55_RS12350 PF13807 G-rich domain on putative tyrosine kinase H1D55_RS12350 PF13614 AAA domain H1D55_RS12355 PF01451 Low molecular weight phosphotyrosine protein phosphatase H1D55_RS12360 PF02563 Polysaccharide biosynthesis/export protein H1D55_RS12360 PF10531 SLBB domain H1D55_RS12360 PF18412 Outer-membrane lipoprotein Wza C-terminal domain H1D55_RS12365 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain H1D55_RS12365 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain H1D55_RS12365 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain H1D55_RS12375 PF01501 Glycosyl transferase family 8 H1D55_RS12375 PF00535 Glycosyl transferase family 2 H1D55_RS12380 PF00534 Glycosyl transferases group 1 H1D55_RS12380 PF13439 Glycosyltransferase Family 4 H1D55_RS12390 PF13439 Glycosyltransferase Family 4 H1D55_RS12390 PF00534 Glycosyl transferases group 1 H1D55_RS12395 PF13477 Glycosyl transferase 4-like H1D55_RS12395 PF00534 Glycosyl transferases group 1 H1D55_RS12400 PF02397 Bacterial sugar transferase H1D55_RS12405 PF00483 Nucleotidyl transferase H1D55_RS12410 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain H1D55_RS12410 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain H1D55_RS12410 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain H1D55_RS12415 PF00342 Phosphoglucose isomerase H1D55_RS12420 PF16363 GDP-mannose 4,6 dehydratase H1D55_RS12430 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I H1D55_RS12430 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II H1D55_RS12430 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III H1D55_RS12430 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain H1D55_RS12435 PF02652 L-lactate permease H1D55_RS12440 PF00392 Bacterial regulatory proteins, gntR family H1D55_RS12440 PF07729 FCD domain H1D55_RS12445 PF01070 FMN-dependent dehydrogenase H1D55_RS12450 PF01565 FAD binding domain H1D55_RS12450 PF09330 D-lactate dehydrogenase, membrane binding H1D55_RS12455 PF00155 Aminotransferase class I and II H1D55_RS12460 PF07729 FCD domain H1D55_RS12460 PF00392 Bacterial regulatory proteins, gntR family H1D55_RS12470 PF00285 Citrate synthase, C-terminal domain H1D55_RS12475 PF00330 Aconitase family (aconitate hydratase) H1D55_RS12475 PF00694 Aconitase C-terminal domain H1D55_RS12520 PF02801 Beta-ketoacyl synthase, C-terminal domain H1D55_RS12520 PF00109 Beta-ketoacyl synthase, N-terminal domain H1D55_RS12530 PF04717 Type VI secretion system, phage-baseplate injector H1D55_RS12530 PF13296 Putative type VI secretion system Rhs element Vgr H1D55_RS12530 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) H1D55_RS12560 PF00849 RNA pseudouridylate synthase H1D55_RS12575 PF07715 TonB-dependent Receptor Plug Domain H1D55_RS12575 PF00593 TonB dependent receptor H1D55_RS12585 PF01037 Lrp/AsnC ligand binding domain H1D55_RS12590 PF01266 FAD dependent oxidoreductase H1D55_RS12595 PF00842 Alanine racemase, C-terminal domain H1D55_RS12595 PF01168 Alanine racemase, N-terminal domain H1D55_RS12600 PF01042 Endoribonuclease L-PSP H1D55_RS12605 PF00324 Amino acid permease H1D55_RS12610 PF00324 Amino acid permease H1D55_RS12620 PF00171 Aldehyde dehydrogenase family H1D55_RS12625 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase H1D55_RS12625 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase H1D55_RS12630 PF13193 AMP-binding enzyme C-terminal domain H1D55_RS12630 PF00501 AMP-binding enzyme H1D55_RS12635 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H1D55_RS12635 PF02770 Acyl-CoA dehydrogenase, middle domain H1D55_RS12635 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H1D55_RS12640 PF00378 Enoyl-CoA hydratase/isomerase H1D55_RS12645 PF00378 Enoyl-CoA hydratase/isomerase H1D55_RS12650 PF07690 Major Facilitator Superfamily H1D55_RS12650 PF00083 Sugar (and other) transporter H1D55_RS12655 PF00765 Autoinducer synthase H1D55_RS12665 PF03472 Autoinducer binding domain H1D55_RS12665 PF00196 Bacterial regulatory proteins, luxR family H1D55_RS12670 PF00501 AMP-binding enzyme H1D55_RS12675 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H1D55_RS12675 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H1D55_RS12675 PF02770 Acyl-CoA dehydrogenase, middle domain H1D55_RS12680 PF16197 Ketoacyl-synthetase C-terminal extension H1D55_RS12680 PF00109 Beta-ketoacyl synthase, N-terminal domain H1D55_RS12680 PF02801 Beta-ketoacyl synthase, C-terminal domain H1D55_RS12680 PF08242 Methyltransferase domain H1D55_RS12680 PF00550 Phosphopantetheine attachment site H1D55_RS12680 PF14765 Polyketide synthase dehydratase H1D55_RS12680 PF00975 Thioesterase domain H1D55_RS12685 PF00975 Thioesterase domain H1D55_RS12685 PF00550 Phosphopantetheine attachment site H1D55_RS12685 PF13193 AMP-binding enzyme C-terminal domain H1D55_RS12685 PF00668 Condensation domain H1D55_RS12685 PF00501 AMP-binding enzyme H1D55_RS12700 PF12697 Alpha/beta hydrolase family H1D55_RS12705 PF01648 4'-phosphopantetheinyl transferase superfamily H1D55_RS12720 PF01722 BolA-like protein H1D55_RS12730 PF13614 AAA domain H1D55_RS12745 PF09335 SNARE associated Golgi protein H1D55_RS12750 PF07681 DoxX H1D55_RS12755 PF04286 Protein of unknown function (DUF445) H1D55_RS12760 PF00117 Glutamine amidotransferase class-I H1D55_RS12760 PF00958 GMP synthase C terminal domain H1D55_RS12760 PF02540 NAD synthase H1D55_RS12765 PF13427 Domain of unknown function (DUF4111) H1D55_RS12765 PF01909 Nucleotidyltransferase domain H1D55_RS12770 PF03551 Transcriptional regulator PadR-like family H1D55_RS12780 PF02678 Pirin H1D55_RS12780 PF05726 Pirin C-terminal cupin domain H1D55_RS12800 PF03485 Arginyl tRNA synthetase N terminal domain H1D55_RS12800 PF05746 DALR anticodon binding domain H1D55_RS12800 PF00750 tRNA synthetases class I (R) H1D55_RS12805 PF00390 Malic enzyme, N-terminal domain H1D55_RS12805 PF03949 Malic enzyme, NAD binding domain H1D55_RS12810 PF04261 Dyp-type peroxidase family H1D55_RS12815 PF01810 LysE type translocator H1D55_RS12820 PF00950 ABC 3 transport family H1D55_RS12825 PF00005 ABC transporter H1D55_RS12845 PF00119 ATP synthase A chain H1D55_RS12850 PF00137 ATP synthase subunit C H1D55_RS12855 PF00430 ATP synthase B/B' CF(0) H1D55_RS12860 PF00213 ATP synthase delta (OSCP) subunit H1D55_RS12865 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H1D55_RS12865 PF00306 ATP synthase alpha/beta chain, C terminal domain H1D55_RS12865 PF02874 ATP synthase alpha/beta family, beta-barrel domain H1D55_RS12870 PF00231 ATP synthase H1D55_RS12875 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H1D55_RS12875 PF02874 ATP synthase alpha/beta family, beta-barrel domain H1D55_RS12880 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain H1D55_RS12890 PF00255 Glutathione peroxidase H1D55_RS12900 PF07690 Major Facilitator Superfamily H1D55_RS12905 PF00440 Bacterial regulatory proteins, tetR family H1D55_RS12910 PF00892 EamA-like transporter family H1D55_RS12915 PF01300 Telomere recombination H1D55_RS12920 PF02481 DNA recombination-mediator protein A H1D55_RS12920 PF17782 DprA winged helix domain H1D55_RS12930 PF01327 Polypeptide deformylase H1D55_RS12990 PF00291 Pyridoxal-phosphate dependent enzyme H1D55_RS13000 PF03358 NADPH-dependent FMN reductase H1D55_RS13020 PF11842 Domain of unknown function (DUF3362) H1D55_RS13020 PF04055 Radical SAM superfamily H1D55_RS13020 PF08497 Radical SAM N-terminal H1D55_RS13040 PF00817 impB/mucB/samB family H1D55_RS13040 PF11799 impB/mucB/samB family C-terminal domain H1D55_RS13040 PF11798 IMS family HHH motif H1D55_RS13050 PF07690 Major Facilitator Superfamily H1D55_RS13055 PF03641 Possible lysine decarboxylase H1D55_RS13060 PF03741 Integral membrane protein TerC family H1D55_RS13060 PF03471 Transporter associated domain H1D55_RS13065 PF02810 SEC-C motif H1D55_RS13070 PF03458 UPF0126 domain H1D55_RS13075 PF07690 Major Facilitator Superfamily H1D55_RS13080 PF03989 DNA gyrase C-terminal domain, beta-propeller H1D55_RS13080 PF00521 DNA gyrase/topoisomerase IV, subunit A H1D55_RS13085 PF00501 AMP-binding enzyme H1D55_RS13085 PF13193 AMP-binding enzyme C-terminal domain H1D55_RS13100 PF00719 Inorganic pyrophosphatase H1D55_RS13105 PF03573 outer membrane porin, OprD family H1D55_RS13115 PF00701 Dihydrodipicolinate synthetase family H1D55_RS13130 PF01078 Magnesium chelatase, subunit ChlI H1D55_RS13130 PF13335 Magnesium chelatase, subunit ChlI C-terminal H1D55_RS13140 PF00543 Nitrogen regulatory protein P-II H1D55_RS13145 PF00909 Ammonium Transporter Family H1D55_RS13150 PF03477 ATP cone domain H1D55_RS13155 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region H1D55_RS13155 PF01872 RibD C-terminal domain H1D55_RS13165 PF00677 Lumazine binding domain H1D55_RS13185 PF00883 Cytosol aminopeptidase family, catalytic domain H1D55_RS13185 PF02789 Cytosol aminopeptidase family, N-terminal domain H1D55_RS13195 PF03739 Lipopolysaccharide export system permease LptF/LptG H1D55_RS13200 PF06415 BPG-independent PGAM N-terminus (iPGM_N) H1D55_RS13200 PF01676 Metalloenzyme superfamily H1D55_RS13205 PF00595 PDZ domain H1D55_RS13205 PF03572 Peptidase family S41 H1D55_RS13210 PF00158 Sigma-54 interaction domain H1D55_RS13210 PF00072 Response regulator receiver domain H1D55_RS13210 PF02954 Bacterial regulatory protein, Fis family H1D55_RS13215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H1D55_RS13215 PF00512 His Kinase A (phospho-acceptor) domain H1D55_RS13220 PF00196 Bacterial regulatory proteins, luxR family H1D55_RS13220 PF00072 Response regulator receiver domain H1D55_RS13225 PF00768 D-alanyl-D-alanine carboxypeptidase H1D55_RS13230 PF00291 Pyridoxal-phosphate dependent enzyme H1D55_RS13235 PF03447 Homoserine dehydrogenase, NAD binding domain H1D55_RS13235 PF00742 Homoserine dehydrogenase H1D55_RS13235 PF01842 ACT domain H1D55_RS13240 PF13098 Thioredoxin-like domain H1D55_RS13240 PF10411 Disulfide bond isomerase protein N-terminus H1D55_RS13245 PF02899 Phage integrase, N-terminal SAM-like domain H1D55_RS13245 PF00589 Phage integrase family H1D55_RS13255 PF07670 Nucleoside recognition H1D55_RS13255 PF07664 Ferrous iron transport protein B C terminus H1D55_RS13255 PF02421 Ferrous iron transport protein B H1D55_RS13265 PF02875 Mur ligase family, glutamate ligase domain H1D55_RS13265 PF08245 Mur ligase middle domain H1D55_RS13270 PF01098 Cell cycle protein H1D55_RS13275 PF00749 tRNA synthetases class I (E and Q), catalytic domain H1D55_RS13280 PF01258 Prokaryotic dksA/traR C4-type zinc finger H1D55_RS13285 PF00149 Calcineurin-like phosphoesterase H1D55_RS13290 PF00293 NUDIX domain H1D55_RS13295 PF13667 ThiC-associated domain H1D55_RS13295 PF01964 Radical SAM ThiC family H1D55_RS13310 PF00892 EamA-like transporter family H1D55_RS13315 PF02321 Outer membrane efflux protein H1D55_RS13320 PF01895 PhoU domain H1D55_RS13325 PF04362 Bacterial Fe(2+) trafficking H1D55_RS13330 PF14698 Argininosuccinate lyase C-terminal H1D55_RS13330 PF00206 Lyase H1D55_RS13335 PF07694 5TMR of 5TMR-LYT H1D55_RS13335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H1D55_RS13335 PF06580 Histidine kinase H1D55_RS13340 PF04397 LytTr DNA-binding domain H1D55_RS13340 PF00072 Response regulator receiver domain H1D55_RS13345 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain H1D55_RS13345 PF03900 Porphobilinogen deaminase, C-terminal domain H1D55_RS13370 PF00816 H-NS histone family H1D55_RS13385 PF00263 Bacterial type II and III secretion system protein H1D55_RS13385 PF03958 Bacterial type II/III secretion system short domain H1D55_RS13390 PF00498 FHA domain H1D55_RS13390 PF12401 Protein of unknown function (DUF2662) H1D55_RS13395 PF13419 Haloacid dehalogenase-like hydrolase H1D55_RS13400 PF04715 Anthranilate synthase component I, N terminal region H1D55_RS13400 PF00425 chorismate binding enzyme H1D55_RS13425 PF03143 Elongation factor Tu C-terminal domain H1D55_RS13425 PF03144 Elongation factor Tu domain 2 H1D55_RS13425 PF00009 Elongation factor Tu GTP binding domain H1D55_RS13435 PF00584 SecE/Sec61-gamma subunits of protein translocation complex H1D55_RS13440 PF00467 KOW motif H1D55_RS13440 PF02357 Transcription termination factor nusG H1D55_RS13445 PF00298 Ribosomal protein L11, RNA binding domain H1D55_RS13445 PF03946 Ribosomal protein L11, N-terminal domain H1D55_RS13450 PF00687 Ribosomal protein L1p/L10e family H1D55_RS13455 PF00466 Ribosomal protein L10 H1D55_RS13460 PF00542 Ribosomal protein L7/L12 C-terminal domain H1D55_RS13460 PF16320 Ribosomal protein L7/L12 dimerisation domain H1D55_RS13465 PF04563 RNA polymerase beta subunit H1D55_RS13465 PF04561 RNA polymerase Rpb2, domain 2 H1D55_RS13465 PF10385 RNA polymerase beta subunit external 1 domain H1D55_RS13465 PF00562 RNA polymerase Rpb2, domain 6 H1D55_RS13465 PF04560 RNA polymerase Rpb2, domain 7 H1D55_RS13465 PF04565 RNA polymerase Rpb2, domain 3 H1D55_RS13470 PF04997 RNA polymerase Rpb1, domain 1 H1D55_RS13470 PF00623 RNA polymerase Rpb1, domain 2 H1D55_RS13470 PF04983 RNA polymerase Rpb1, domain 3 H1D55_RS13470 PF05000 RNA polymerase Rpb1, domain 4 H1D55_RS13470 PF04998 RNA polymerase Rpb1, domain 5 H1D55_RS13495 PF13726 Na+-H+ antiporter family H1D55_RS13495 PF03553 Na+/H+ antiporter family H1D55_RS13510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H1D55_RS13510 PF00183 Hsp90 protein H1D55_RS13525 PF01323 DSBA-like thioredoxin domain H1D55_RS13535 PF09278 MerR, DNA binding H1D55_RS13535 PF00376 MerR family regulatory protein H1D55_RS13550 PF02803 Thiolase, C-terminal domain H1D55_RS13550 PF00108 Thiolase, N-terminal domain H1D55_RS13555 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain H1D55_RS13555 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain H1D55_RS13555 PF00378 Enoyl-CoA hydratase/isomerase H1D55_RS13575 PF01541 GIY-YIG catalytic domain H1D55_RS13575 PF02151 UvrB/uvrC motif H1D55_RS13575 PF08459 UvrC Helix-hairpin-helix N-terminal H1D55_RS13585 PF01066 CDP-alcohol phosphatidyltransferase H1D55_RS13590 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain H1D55_RS13590 PF02805 Metal binding domain of Ada H1D55_RS13590 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain H1D55_RS13590 PF12833 Helix-turn-helix domain H1D55_RS13615 PF13533 Biotin-lipoyl like H1D55_RS13620 PF03652 Holliday junction resolvase H1D55_RS13625 PF02622 Uncharacterized ACR, COG1678 H1D55_RS13630 PF02463 RecF/RecN/SMC N terminal domain H1D55_RS13640 PF06865 Pyrimidine/purine nucleoside phosphorylase H1D55_RS13645 PF00588 SpoU rRNA Methylase family H1D55_RS13645 PF08032 RNA 2'-O ribose methyltransferase substrate binding H1D55_RS13655 PF01121 Dephospho-CoA kinase H1D55_RS13660 PF06750 Bacterial Peptidase A24 N-terminal domain H1D55_RS13660 PF01478 Type IV leader peptidase family H1D55_RS13670 PF00482 Type II secretion system (T2SS), protein F H1D55_RS13675 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain H1D55_RS13675 PF00437 Type II/IV secretion system protein H1D55_RS13680 PF00121 Triosephosphate isomerase H1D55_RS13685 PF03840 Preprotein translocase SecG subunit H1D55_RS13705 PF02576 RimP N-terminal domain H1D55_RS13705 PF17384 RimP C-terminal SH3 domain H1D55_RS13710 PF13184 NusA-like KH domain H1D55_RS13710 PF08529 NusA N-terminal domain H1D55_RS13710 PF00575 S1 RNA binding domain H1D55_RS13715 PF08364 Bacterial translation initiation factor IF-2 associated region H1D55_RS13715 PF04760 Translation initiation factor IF-2, N-terminal region H1D55_RS13715 PF00009 Elongation factor Tu GTP binding domain H1D55_RS13715 PF11987 Translation-initiation factor 2 H1D55_RS13720 PF02033 Ribosome-binding factor A H1D55_RS13725 PF03334 Na+/H+ antiporter subunit H1D55_RS13730 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) H1D55_RS13735 PF01899 Na+/H+ ion antiporter subunit H1D55_RS13740 PF00361 Proton-conducting membrane transporter H1D55_RS13745 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L H1D55_RS13750 PF13244 Domain of unknown function (DUF4040) H1D55_RS13750 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter H1D55_RS13750 PF00361 Proton-conducting membrane transporter H1D55_RS13750 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus H1D55_RS13765 PF01502 Phosphoribosyl-AMP cyclohydrolase H1D55_RS13770 PF01494 FAD binding domain H1D55_RS13775 PF03109 ABC1 family H1D55_RS13785 PF01209 ubiE/COQ5 methyltransferase family H1D55_RS13795 PF03976 Polyphosphate kinase 2 (PPK2) H1D55_RS13805 PF17946 RecC C-terminal domain H1D55_RS13810 PF12705 PD-(D/E)XK nuclease superfamily H1D55_RS13810 PF00580 UvrD/REP helicase N-terminal domain H1D55_RS13810 PF13361 UvrD-like helicase C-terminal domain H1D55_RS13815 PF13538 UvrD-like helicase C-terminal domain H1D55_RS13820 PF00144 Beta-lactamase H1D55_RS13825 PF00312 Ribosomal protein S15 H1D55_RS13830 PF00013 KH domain H1D55_RS13830 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain H1D55_RS13830 PF01138 3' exoribonuclease family, domain 1 H1D55_RS13830 PF03725 3' exoribonuclease family, domain 2 H1D55_RS13830 PF00575 S1 RNA binding domain H1D55_RS13835 PF01544 CorA-like Mg2+ transporter protein H1D55_RS13845 PF00226 DnaJ domain H1D55_RS13845 PF01556 DnaJ C terminal domain H1D55_RS13855 PF01430 Hsp33 protein H1D55_RS13860 PF00999 Sodium/hydrogen exchanger family H1D55_RS13860 PF02254 TrkA-N domain H1D55_RS13865 PF17764 3′ DNA-binding domain (3′BD) H1D55_RS13865 PF00270 DEAD/DEAH box helicase H1D55_RS13865 PF00271 Helicase conserved C-terminal domain H1D55_RS13865 PF18074 Primosomal protein N C-terminal domain H1D55_RS13865 PF18319 PriA DNA helicase Cys-rich region (CRR) domain H1D55_RS13870 PF00482 Type II secretion system (T2SS), protein F H1D55_RS13875 PF07963 Prokaryotic N-terminal methylation motif H1D55_RS13875 PF08334 Type II secretion system (T2SS), protein G H1D55_RS13885 PF01588 Putative tRNA binding domain H1D55_RS13890 PF00795 Carbon-nitrogen hydrolase H1D55_RS13895 PF00571 CBS domain H1D55_RS13895 PF03471 Transporter associated domain H1D55_RS13900 PF01206 Sulfurtransferase TusA H1D55_RS13915 PF01177 Asp/Glu/Hydantoin racemase H1D55_RS13925 PF00762 Ferrochelatase H1D55_RS13930 PF00753 Metallo-beta-lactamase superfamily H1D55_RS13935 PF03884 DNA gyrase inhibitor YacG H1D55_RS13945 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster H1D55_RS13945 PF13247 4Fe-4S dicluster domain H1D55_RS13945 PF07992 Pyridine nucleotide-disulphide oxidoreductase H1D55_RS13955 PF02537 CrcB-like protein, Camphor Resistance (CrcB) H1D55_RS13965 PF01197 Ribosomal protein L31 H1D55_RS13970 PF03109 ABC1 family H1D55_RS13980 PF08028 Acyl-CoA dehydrogenase, C-terminal domain H1D55_RS13980 PF02770 Acyl-CoA dehydrogenase, middle domain H1D55_RS13980 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H1D55_RS13985 PF01554 MatE H1D55_RS13995 PF06969 HemN C-terminal domain H1D55_RS13995 PF04055 Radical SAM superfamily H1D55_RS14000 PF00106 short chain dehydrogenase H1D55_RS14005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H1D55_RS14005 PF03466 LysR substrate binding domain H1D55_RS14020 PF13193 AMP-binding enzyme C-terminal domain H1D55_RS14020 PF00501 AMP-binding enzyme H1D55_RS14025 PF12111 Polyribonucleotide phosphorylase C terminal H1D55_RS14025 PF10150 Ribonuclease E/G family H1D55_RS14025 PF00575 S1 RNA binding domain H1D55_RS14030 PF01479 S4 domain H1D55_RS14030 PF00849 RNA pseudouridylate synthase H1D55_RS14035 PF13419 Haloacid dehalogenase-like hydrolase H1D55_RS14040 PF13280 WYL domain H1D55_RS14040 PF08279 HTH domain H1D55_RS14045 PF02798 Glutathione S-transferase, N-terminal domain H1D55_RS14055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H1D55_RS14055 PF03466 LysR substrate binding domain H1D55_RS14060 PF12706 Beta-lactamase superfamily domain H1D55_RS14065 PF00141 Peroxidase H1D55_RS14070 PF01590 GAF domain H1D55_RS14070 PF05524 PEP-utilising enzyme, N-terminal H1D55_RS14070 PF00391 PEP-utilising enzyme, mobile domain H1D55_RS14070 PF02896 PEP-utilising enzyme, TIM barrel domain H1D55_RS14075 PF00293 NUDIX domain H1D55_RS14095 PF03466 LysR substrate binding domain H1D55_RS14095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H1D55_RS14105 PF00330 Aconitase family (aconitate hydratase) H1D55_RS14110 PF00694 Aconitase C-terminal domain H1D55_RS14120 PF00180 Isocitrate/isopropylmalate dehydrogenase H1D55_RS14135 PF01176 Translation initiation factor 1A / IF-1 H1D55_RS14145 PF01416 tRNA pseudouridine synthase H1D55_RS14165 PF01118 Semialdehyde dehydrogenase, NAD binding domain H1D55_RS14165 PF02774 Semialdehyde dehydrogenase, dimerisation domain H1D55_RS14175 PF00375 Sodium:dicarboxylate symporter family H1D55_RS14185 PF03279 Bacterial lipid A biosynthesis acyltransferase H1D55_RS14190 PF01810 LysE type translocator H1D55_RS14195 PF00005 ABC transporter H1D55_RS14195 PF16326 ABC transporter C-terminal domain H1D55_RS14195 PF12848 ABC transporter H1D55_RS14200 PF04102 SlyX H1D55_RS14205 PF08240 Alcohol dehydrogenase GroES-like domain H1D55_RS14205 PF00107 Zinc-binding dehydrogenase H1D55_RS14210 PF01638 HxlR-like helix-turn-helix H1D55_RS14220 PF08272 Topoisomerase I zinc-ribbon-like H1D55_RS14220 PF01131 DNA topoisomerase H1D55_RS14220 PF01751 Toprim domain H1D55_RS14220 PF01396 Topoisomerase DNA binding C4 zinc finger H1D55_RS14235 PF00580 UvrD/REP helicase N-terminal domain H1D55_RS14235 PF13361 UvrD-like helicase C-terminal domain H1D55_RS14240 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) H1D55_RS14260 PF02254 TrkA-N domain H1D55_RS14260 PF00999 Sodium/hydrogen exchanger family H1D55_RS14265 PF00471 Ribosomal protein L33 H1D55_RS14270 PF00830 Ribosomal L28 family H1D55_RS14275 PF00171 Aldehyde dehydrogenase family H1D55_RS14285 PF01842 ACT domain H1D55_RS14285 PF00551 Formyl transferase H1D55_RS14295 PF01618 MotA/TolQ/ExbB proton channel family H1D55_RS14305 PF01625 Peptide methionine sulfoxide reductase H1D55_RS14315 PF00186 Dihydrofolate reductase H1D55_RS14320 PF00303 Thymidylate synthase H1D55_RS14335 PF01790 Prolipoprotein diacylglyceryl transferase H1D55_RS14355 PF00902 Sec-independent protein translocase protein (TatC) H1D55_RS14360 PF02416 mttA/Hcf106 family H1D55_RS14365 PF02416 mttA/Hcf106 family H1D55_RS14375 PF01725 Ham1 family H1D55_RS14385 PF00561 alpha/beta hydrolase fold H1D55_RS14385 PF07021 Methionine biosynthesis protein MetW H1D55_RS14390 PF00561 alpha/beta hydrolase fold H1D55_RS14395 PF00682 HMGL-like H1D55_RS14395 PF08502 LeuA allosteric (dimerisation) domain H1D55_RS14400 PF18331 PKHD-type hydroxylase C-terminal domain H1D55_RS14400 PF13640 2OG-Fe(II) oxygenase superfamily H1D55_RS14405 PF00593 TonB dependent receptor H1D55_RS14405 PF07715 TonB-dependent Receptor Plug Domain H1D55_RS14410 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H1D55_RS14410 PF05697 Bacterial trigger factor protein (TF) H1D55_RS14410 PF05698 Bacterial trigger factor protein (TF) C-terminus H1D55_RS14415 PF00574 Clp protease H1D55_RS14420 PF07724 AAA domain (Cdc48 subfamily) H1D55_RS14420 PF06689 ClpX C4-type zinc finger H1D55_RS14420 PF10431 C-terminal, D2-small domain, of ClpB protein H1D55_RS14435 PF05681 Fumarate hydratase (Fumerase) H1D55_RS14435 PF05683 Fumarase C-terminus H1D55_RS14440 PF07085 DRTGG domain H1D55_RS14440 PF01515 Phosphate acetyl/butaryl transferase H1D55_RS14445 PF00871 Acetokinase family H1D55_RS14450 PF00920 Dehydratase family H1D55_RS14455 PF01081 KDPG and KHG aldolase H1D55_RS14460 PF02447 GntP family permease H1D55_RS14465 PF01202 Shikimate kinase H1D55_RS14470 PF00171 Aldehyde dehydrogenase family H1D55_RS14475 PF00171 Aldehyde dehydrogenase family H1D55_RS14480 PF00561 alpha/beta hydrolase fold H1D55_RS14490 PF00933 Glycosyl hydrolase family 3 N terminal domain H1D55_RS14495 PF11818 C-terminal domain of tail specific protease (DUF3340) H1D55_RS14495 PF00595 PDZ domain H1D55_RS14495 PF03572 Peptidase family S41 H1D55_RS14495 PF17804 Tail specific protease N-terminal domain H1D55_RS14500 PF00534 Glycosyl transferases group 1 H1D55_RS14500 PF13439 Glycosyltransferase Family 4 H1D55_RS14505 PF01569 PAP2 superfamily H1D55_RS14510 PF04384 Iron-sulphur cluster assembly H1D55_RS14515 PF00334 Nucleoside diphosphate kinase H1D55_RS14520 PF04055 Radical SAM superfamily H1D55_RS14530 PF13464 Domain of unknown function (DUF4115) H1D55_RS14535 PF04551 GcpE protein H1D55_RS14540 PF03129 Anticodon binding domain H1D55_RS14540 PF13393 Histidyl-tRNA synthetase H1D55_RS14550 PF13360 PQQ-like domain H1D55_RS14555 PF01926 50S ribosome-binding GTPase H1D55_RS14555 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal H1D55_RS14565 PF02556 Preprotein translocase subunit SecB H1D55_RS14570 PF00462 Glutaredoxin H1D55_RS14580 PF03193 RsgA GTPase H1D55_RS14585 PF00929 Exonuclease H1D55_RS14600 PF02321 Outer membrane efflux protein H1D55_RS14605 PF00005 ABC transporter H1D55_RS14605 PF02687 FtsX-like permease family H1D55_RS14605 PF12704 MacB-like periplasmic core domain H1D55_RS14610 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H1D55_RS14625 PF09334 tRNA synthetases class I (M) H1D55_RS14625 PF13603 Leucyl-tRNA synthetase, Domain 2 H1D55_RS14625 PF00133 tRNA synthetases class I (I, L, M and V) H1D55_RS14625 PF08264 Anticodon-binding domain of tRNA H1D55_RS14635 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain H1D55_RS14635 PF00205 Thiamine pyrophosphate enzyme, central domain H1D55_RS14635 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain H1D55_RS14640 PF10369 Small subunit of acetolactate synthase H1D55_RS14645 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain H1D55_RS14645 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain H1D55_RS14650 PF03707 Bacterial signalling protein N terminal repeat H1D55_RS14650 PF00990 Diguanylate cyclase, GGDEF domain H1D55_RS14650 PF00563 EAL domain H1D55_RS14670 PF00009 Elongation factor Tu GTP binding domain H1D55_RS14670 PF03144 Elongation factor Tu domain 2 H1D55_RS14670 PF16658 Class II release factor RF3, C-terminal domain H1D55_RS14685 PF01026 TatD related DNase H1D55_RS14690 PF00330 Aconitase family (aconitate hydratase) H1D55_RS14690 PF00694 Aconitase C-terminal domain H1D55_RS14700 PF00899 ThiF family H1D55_RS14710 PF03466 LysR substrate binding domain H1D55_RS14710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H1D55_RS14720 PF01207 Dihydrouridine synthase (Dus) H1D55_RS14725 PF07690 Major Facilitator Superfamily H1D55_RS14735 PF00892 EamA-like transporter family H1D55_RS14740 PF01262 Alanine dehydrogenase/PNT, C-terminal domain H1D55_RS14740 PF05222 Alanine dehydrogenase/PNT, N-terminal domain H1D55_RS14745 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch H1D55_RS14750 PF02233 NAD(P) transhydrogenase beta subunit H1D55_RS14755 PF00106 short chain dehydrogenase H1D55_RS14765 PF01261 Xylose isomerase-like TIM barrel H1D55_RS14770 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase H1D55_RS14770 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase H1D55_RS14775 PF00378 Enoyl-CoA hydratase/isomerase H1D55_RS14780 PF00672 HAMP domain H1D55_RS14780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H1D55_RS14780 PF00512 His Kinase A (phospho-acceptor) domain H1D55_RS14780 PF01627 Hpt domain H1D55_RS14780 PF00072 Response regulator receiver domain H1D55_RS14780 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) H1D55_RS14785 PF00291 Pyridoxal-phosphate dependent enzyme H1D55_RS14795 PF05958 tRNA (Uracil-5-)-methyltransferase H1D55_RS14800 PF13291 ACT domain H1D55_RS14800 PF04607 Region found in RelA / SpoT proteins H1D55_RS14800 PF02824 TGS domain H1D55_RS14810 PF03819 MazG nucleotide pyrophosphohydrolase domain H1D55_RS14820 PF12626 Polymerase A arginine-rich C-terminus H1D55_RS14820 PF01743 Poly A polymerase head domain H1D55_RS14820 PF12627 Probable RNA and SrmB- binding site of polymerase A H1D55_RS14825 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) H1D55_RS14830 PF02548 Ketopantoate hydroxymethyltransferase H1D55_RS14835 PF02569 Pantoate-beta-alanine ligase H1D55_RS14840 PF03668 P-loop ATPase protein family H1D55_RS14845 PF00381 PTS HPr component phosphorylation site H1D55_RS14850 PF04751 Protein of unknown function (DUF615) H1D55_RS14855 PF00501 AMP-binding enzyme H1D55_RS14855 PF13193 AMP-binding enzyme C-terminal domain H1D55_RS14860 PF03129 Anticodon binding domain H1D55_RS14860 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) H1D55_RS14860 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain H1D55_RS14860 PF02824 TGS domain H1D55_RS14865 PF00707 Translation initiation factor IF-3, C-terminal domain H1D55_RS14865 PF05198 Translation initiation factor IF-3, N-terminal domain H1D55_RS14870 PF02798 Glutathione S-transferase, N-terminal domain H1D55_RS14870 PF00043 Glutathione S-transferase, C-terminal domain H1D55_RS14875 PF09335 SNARE associated Golgi protein H1D55_RS14880 PF07690 Major Facilitator Superfamily H1D55_RS14890 PF01632 Ribosomal protein L35 H1D55_RS14895 PF00453 Ribosomal protein L20 H1D55_RS14915 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain H1D55_RS14915 PF01409 tRNA synthetases class II core domain (F) H1D55_RS14920 PF03483 B3/4 domain H1D55_RS14920 PF03484 tRNA synthetase B5 domain H1D55_RS14920 PF03147 Ferredoxin-fold anticodon binding domain H1D55_RS14920 PF01588 Putative tRNA binding domain H1D55_RS14920 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain H1D55_RS14925 PF00216 Bacterial DNA-binding protein H1D55_RS14940 PF07498 Rho termination factor, N-terminal domain H1D55_RS14940 PF07497 Rho termination factor, RNA-binding domain H1D55_RS14940 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H1D55_RS14945 PF00085 Thioredoxin H1D55_RS14950 PF02541 Ppx/GppA phosphatase family H1D55_RS14955 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit H1D55_RS14960 PF01171 PP-loop family H1D55_RS14960 PF09179 TilS substrate binding domain H1D55_RS14960 PF11734 TilS substrate C-terminal domain H1D55_RS14965 PF03807 NADP oxidoreductase coenzyme F420-dependent H1D55_RS14965 PF14748 Pyrroline-5-carboxylate reductase dimerisation H1D55_RS14970 PF02325 YGGT family H1D55_RS14975 PF01367 5'-3' exonuclease, C-terminal SAM fold H1D55_RS14975 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain H1D55_RS14975 PF01612 3'-5' exonuclease H1D55_RS14975 PF00476 DNA polymerase family A H1D55_RS14995 PF00437 Type II/IV secretion system protein H1D55_RS15000 PF02566 OsmC-like protein H1D55_RS15005 PF01047 MarR family H1D55_RS15015 PF00795 Carbon-nitrogen hydrolase H1D55_RS15060 PF00309 Sigma-54 factor, Activator interacting domain (AID) H1D55_RS15060 PF04963 Sigma-54 factor, core binding domain H1D55_RS15060 PF04552 Sigma-54, DNA binding domain H1D55_RS15065 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein H1D55_RS15070 PF01722 BolA-like protein H1D55_RS15075 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) H1D55_RS15080 PF01634 ATP phosphoribosyltransferase H1D55_RS15085 PF00815 Histidinol dehydrogenase H1D55_RS15090 PF00155 Aminotransferase class I and II H1D55_RS15095 PF00425 chorismate binding enzyme H1D55_RS15095 PF04715 Anthranilate synthase component I, N terminal region H1D55_RS15135 PF00293 NUDIX domain H1D55_RS15140 PF00132 Bacterial transferase hexapeptide (six repeats) H1D55_RS15145 PF00814 Glycoprotease family H1D55_RS15150 PF04445 Putative SAM-dependent methyltransferase H1D55_RS15160 PF00756 Putative esterase H1D55_RS15170 PF00834 Ribulose-phosphate 3 epimerase family H1D55_RS15185 PF00394 Multicopper oxidase H1D55_RS15185 PF07731 Multicopper oxidase H1D55_RS15185 PF07732 Multicopper oxidase H1D55_RS15200 PF00893 Small Multidrug Resistance protein H1D55_RS15205 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain H1D55_RS15205 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain H1D55_RS15210 PF01960 ArgJ family H1D55_RS15215 PF02445 Quinolinate synthetase A protein H1D55_RS15240 PF00962 Adenosine/AMP deaminase H1D55_RS15245 PF08240 Alcohol dehydrogenase GroES-like domain H1D55_RS15245 PF00107 Zinc-binding dehydrogenase H1D55_RS15250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H1D55_RS15250 PF03466 LysR substrate binding domain H1D55_RS15255 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H1D55_RS15255 PF02770 Acyl-CoA dehydrogenase, middle domain H1D55_RS15255 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H1D55_RS15260 PF07690 Major Facilitator Superfamily H1D55_RS15265 PF02515 CoA-transferase family III H1D55_RS15270 PF17932 Tetracyclin repressor-like, C-terminal domain H1D55_RS15270 PF00440 Bacterial regulatory proteins, tetR family H1D55_RS15285 PF00890 FAD binding domain H1D55_RS15285 PF14537 Cytochrome c3 H1D55_RS15290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H1D55_RS15290 PF03466 LysR substrate binding domain H1D55_RS15300 PF07690 Major Facilitator Superfamily H1D55_RS15305 PF03466 LysR substrate binding domain H1D55_RS15305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H1D55_RS15310 PF01810 LysE type translocator H1D55_RS15315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H1D55_RS15315 PF03466 LysR substrate binding domain H1D55_RS15325 PF08267 Cobalamin-independent synthase, N-terminal domain H1D55_RS15325 PF01717 Cobalamin-independent synthase, Catalytic domain H1D55_RS15330 PF01613 Flavin reductase like domain H1D55_RS15370 PF17074 Darcynin, domain of unknown function H1D55_RS15385 PF00268 Ribonucleotide reductase, small chain H1D55_RS15395 PF02867 Ribonucleotide reductase, barrel domain H1D55_RS15395 PF00317 Ribonucleotide reductase, all-alpha domain H1D55_RS15395 PF03477 ATP cone domain H1D55_RS15405 PF00072 Response regulator receiver domain H1D55_RS15405 PF00486 Transcriptional regulatory protein, C terminal H1D55_RS15410 PF00672 HAMP domain H1D55_RS15410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H1D55_RS15410 PF00512 His Kinase A (phospho-acceptor) domain H1D55_RS15420 PF00990 Diguanylate cyclase, GGDEF domain H1D55_RS15420 PF17151 Periplasmic sensor domain H1D55_RS15425 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 H1D55_RS15430 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit H1D55_RS15435 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit H1D55_RS15435 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit H1D55_RS15445 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit H1D55_RS15445 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region H1D55_RS15445 PF10531 SLBB domain H1D55_RS15450 PF04879 Molybdopterin oxidoreductase Fe4S4 domain H1D55_RS15450 PF00384 Molybdopterin oxidoreductase H1D55_RS15450 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region H1D55_RS15455 PF00146 NADH dehydrogenase H1D55_RS15460 PF12838 4Fe-4S dicluster domain H1D55_RS15465 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 H1D55_RS15470 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L H1D55_RS15475 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus H1D55_RS15475 PF00361 Proton-conducting membrane transporter H1D55_RS15480 PF00361 Proton-conducting membrane transporter H1D55_RS15485 PF00361 Proton-conducting membrane transporter H1D55_RS15495 PF00313 'Cold-shock' DNA-binding domain H1D55_RS15500 PF03466 LysR substrate binding domain H1D55_RS15500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H1D55_RS15505 PF00970 Oxidoreductase FAD-binding domain H1D55_RS15505 PF00175 Oxidoreductase NAD-binding domain H1D55_RS15520 PF05552 Conserved TM helix H1D55_RS15535 PF00291 Pyridoxal-phosphate dependent enzyme H1D55_RS15540 PF13533 Biotin-lipoyl like H1D55_RS15565 PF01588 Putative tRNA binding domain H1D55_RS15565 PF09334 tRNA synthetases class I (M) H1D55_RS15575 PF10609 NUBPL iron-transfer P-loop NTPase H1D55_RS15580 PF01048 Phosphorylase superfamily H1D55_RS15595 PF00692 dUTPase H1D55_RS15625 PF01207 Dihydrouridine synthase (Dus) H1D55_RS15635 PF00448 SRP54-type protein, GTPase domain H1D55_RS15635 PF02881 SRP54-type protein, helical bundle domain H1D55_RS15635 PF02978 Signal peptide binding domain H1D55_RS15640 PF03309 Type III pantothenate kinase H1D55_RS15650 PF01925 Sulfite exporter TauE/SafE H1D55_RS15660 PF06470 SMC proteins Flexible Hinge Domain H1D55_RS15660 PF02463 RecF/RecN/SMC N terminal domain H1D55_RS15670 PF12826 Helix-hairpin-helix motif H1D55_RS15670 PF03120 NAD-dependent DNA ligase OB-fold domain H1D55_RS15670 PF01653 NAD-dependent DNA ligase adenylation domain H1D55_RS15670 PF00533 BRCA1 C Terminus (BRCT) domain H1D55_RS15670 PF03119 NAD-dependent DNA ligase C4 zinc finger domain H1D55_RS15675 PF00210 Ferritin-like domain H1D55_RS15680 PF07690 Major Facilitator Superfamily H1D55_RS15685 PF00982 Glycosyltransferase family 20 H1D55_RS15690 PF02358 Trehalose-phosphatase H1D55_RS15695 PF12697 Alpha/beta hydrolase family H1D55_RS15695 PF08241 Methyltransferase domain H1D55_RS15700 PF00202 Aminotransferase class-III H1D55_RS15700 PF06968 Biotin and Thiamin Synthesis associated domain H1D55_RS15700 PF04055 Radical SAM superfamily H1D55_RS15705 PF00155 Aminotransferase class I and II H1D55_RS15720 PF01479 S4 domain H1D55_RS15720 PF00849 RNA pseudouridylate synthase H1D55_RS15725 PF04079 Segregation and condensation complex subunit ScpB H1D55_RS15730 PF02616 Segregation and condensation protein ScpA H1D55_RS15735 PF01300 Telomere recombination H1D55_RS15740 PF04315 Elongation factor P hydroxylase H1D55_RS15745 PF02620 Large ribosomal RNA subunit accumulation protein YceD H1D55_RS15750 PF01783 Ribosomal L32p protein family H1D55_RS15755 PF00698 Acyl transferase domain H1D55_RS15765 PF00550 Phosphopantetheine attachment site H1D55_RS15770 PF01476 LysM domain H1D55_RS15770 PF04972 BON domain H1D55_RS15775 PF02581 Thiamine monophosphate synthase H1D55_RS15775 PF08543 Phosphomethylpyrimidine kinase H1D55_RS15775 PF03070 TENA/THI-4/PQQC family H1D55_RS15785 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase H1D55_RS15800 PF02261 Aspartate decarboxylase H1D55_RS15805 PF01195 Peptidyl-tRNA hydrolase H1D55_RS15810 PF01386 Ribosomal L25p family H1D55_RS15815 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase H1D55_RS15815 PF14572 Phosphoribosyl synthetase-associated domain H1D55_RS15840 PF08544 GHMP kinases C terminal H1D55_RS15840 PF00288 GHMP kinases N terminal domain H1D55_RS15845 PF03550 Outer membrane lipoprotein LolB H1D55_RS15855 PF01488 Shikimate / quinate 5-dehydrogenase H1D55_RS15855 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain H1D55_RS15855 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain H1D55_RS15860 PF01807 CHC2 zinc finger H1D55_RS15860 PF08278 DNA primase DnaG DnaB-binding H1D55_RS15860 PF08275 DNA primase catalytic core, N-terminal domain H1D55_RS15860 PF10410 DnaB-helicase binding domain of primase H1D55_RS15865 PF13525 Outer membrane lipoprotein H1D55_RS15870 PF01479 S4 domain H1D55_RS15870 PF00849 RNA pseudouridylate synthase H1D55_RS15875 PF02578 Multi-copper polyphenol oxidoreductase laccase H1D55_RS15880 PF03358 NADPH-dependent FMN reductase H1D55_RS15885 PF01668 SmpB protein H1D55_RS15890 PF01467 Cytidylyltransferase-like H1D55_RS15895 PF00037 4Fe-4S binding domain H1D55_RS15915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H1D55_RS15915 PF03466 LysR substrate binding domain H1D55_RS15920 PF00180 Isocitrate/isopropylmalate dehydrogenase H1D55_RS15925 PF02028 BCCT, betaine/carnitine/choline family transporter H1D55_RS15930 PF07859 alpha/beta hydrolase fold H1D55_RS15935 PF00355 Rieske [2Fe-2S] domain H1D55_RS15935 PF00848 Ring hydroxylating alpha subunit (catalytic domain) H1D55_RS15940 PF00171 Aldehyde dehydrogenase family H1D55_RS15945 PF00111 2Fe-2S iron-sulfur cluster binding domain H1D55_RS15945 PF00175 Oxidoreductase NAD-binding domain H1D55_RS15945 PF00970 Oxidoreductase FAD-binding domain H1D55_RS15960 PF00795 Carbon-nitrogen hydrolase H1D55_RS15960 PF02540 NAD synthase H1D55_RS15970 PF02678 Pirin H1D55_RS15970 PF05726 Pirin C-terminal cupin domain H1D55_RS15975 PF03653 Uncharacterised protein family (UPF0093) H1D55_RS15980 PF02801 Beta-ketoacyl synthase, C-terminal domain H1D55_RS15980 PF00109 Beta-ketoacyl synthase, N-terminal domain H1D55_RS15990 PF00164 Ribosomal protein S12/S23 H1D55_RS15995 PF00177 Ribosomal protein S7p/S5e H1D55_RS16000 PF14492 Elongation Factor G, domain II H1D55_RS16000 PF03764 Elongation factor G, domain IV H1D55_RS16000 PF00009 Elongation factor Tu GTP binding domain H1D55_RS16000 PF03144 Elongation factor Tu domain 2 H1D55_RS16000 PF00679 Elongation factor G C-terminus H1D55_RS16005 PF03144 Elongation factor Tu domain 2 H1D55_RS16005 PF00009 Elongation factor Tu GTP binding domain H1D55_RS16005 PF03143 Elongation factor Tu C-terminal domain H1D55_RS16020 PF00583 Acetyltransferase (GNAT) family H1D55_RS16025 PF04376 Arginine-tRNA-protein transferase, N terminus H1D55_RS16025 PF04377 Arginine-tRNA-protein transferase, C terminus H1D55_RS16030 PF03588 Leucyl/phenylalanyl-tRNA protein transferase H1D55_RS16035 PF07992 Pyridine nucleotide-disulphide oxidoreductase H1D55_RS16040 PF13491 4TM region of DNA translocase FtsK/SpoIIIE H1D55_RS16040 PF17854 FtsK alpha domain H1D55_RS16040 PF09397 Ftsk gamma domain H1D55_RS16040 PF01580 FtsK/SpoIIIE family H1D55_RS16045 PF01810 LysE type translocator H1D55_RS16055 PF03776 Septum formation topological specificity factor MinE H1D55_RS16060 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain H1D55_RS16065 PF03775 Septum formation inhibitor MinC, C-terminal domain H1D55_RS16075 PF01553 Acyltransferase H1D55_RS16080 PF00691 OmpA family H1D55_RS16080 PF13488 Glycine zipper H1D55_RS16085 PF00580 UvrD/REP helicase N-terminal domain H1D55_RS16085 PF13361 UvrD-like helicase C-terminal domain H1D55_RS16090 PF00692 dUTPase H1D55_RS16095 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I H1D55_RS16095 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II H1D55_RS16095 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III H1D55_RS16095 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain H1D55_RS16100 PF00696 Amino acid kinase family H1D55_RS16110 PF13230 Glutamine amidotransferases class-II H1D55_RS16115 PF01814 Hemerythrin HHE cation binding domain H1D55_RS16125 PF03658 RnfH family Ubiquitin H1D55_RS16130 PF04355 SmpA / OmlA family H1D55_RS16135 PF01475 Ferric uptake regulator family H1D55_RS16140 PF00437 Type II/IV secretion system protein H1D55_RS16145 PF00437 Type II/IV secretion system protein H1D55_RS16150 PF01168 Alanine racemase, N-terminal domain H1D55_RS16160 PF00149 Calcineurin-like phosphoesterase H1D55_RS16160 PF12320 Type 5 capsule protein repressor C-terminal domain H1D55_RS16180 PF08338 Domain of unknown function (DUF1731) H1D55_RS16180 PF01370 NAD dependent epimerase/dehydratase family H1D55_RS16185 PF01266 FAD dependent oxidoreductase H1D55_RS16190 PF00490 Delta-aminolevulinic acid dehydratase H1D55_RS16195 PF03061 Thioesterase superfamily H1D55_RS16200 PF13533 Biotin-lipoyl like H1D55_RS16205 PF07690 Major Facilitator Superfamily H1D55_RS16220 PF13356 Arm DNA-binding domain H1D55_RS16220 PF00589 Phage integrase family H1D55_RS16280 PF10549 ORF11CD3 domain H1D55_RS16280 PF09669 Phage regulatory protein Rha (Phage_pRha) H1D55_RS16450 PF01867 CRISPR associated protein Cas1 H1D55_RS16460 PF09615 CRISPR-associated protein (Cas_Csy3) H1D55_RS16480 PF18019 HD domain H1D55_RS16540 PF00083 Sugar (and other) transporter H1D55_RS16545 PF00701 Dihydrodipicolinate synthetase family H1D55_RS16560 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) H1D55_RS16560 PF04717 Type VI secretion system, phage-baseplate injector H1D55_RS16560 PF13296 Putative type VI secretion system Rhs element Vgr H1D55_RS16590 PF13520 Amino acid permease H1D55_RS16595 PF02574 Homocysteine S-methyltransferase H1D55_RS16605 PF06039 Malate:quinone oxidoreductase (Mqo) H1D55_RS16610 PF05199 GMC oxidoreductase H1D55_RS16610 PF00732 GMC oxidoreductase H1D55_RS16615 PF00171 Aldehyde dehydrogenase family H1D55_RS16620 PF00440 Bacterial regulatory proteins, tetR family H1D55_RS16620 PF13977 BetI-type transcriptional repressor, C-terminal H1D55_RS16625 PF02028 BCCT, betaine/carnitine/choline family transporter H1D55_RS16630 PF02028 BCCT, betaine/carnitine/choline family transporter H1D55_RS16640 PF03061 Thioesterase superfamily H1D55_RS16650 PF02492 CobW/HypB/UreG, nucleotide-binding domain H1D55_RS16650 PF07683 Cobalamin synthesis protein cobW C-terminal domain H1D55_RS16655 PF00375 Sodium:dicarboxylate symporter family H1D55_RS16660 PF07152 YaeQ protein H1D55_RS16665 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H1D55_RS16670 PF14883 Hypothetical glycosyl hydrolase family 13 H1D55_RS16670 PF01522 Polysaccharide deacetylase H1D55_RS16675 PF00535 Glycosyl transferase family 2 H1D55_RS16685 PF00378 Enoyl-CoA hydratase/isomerase H1D55_RS16700 PF09339 IclR helix-turn-helix domain H1D55_RS16700 PF01614 Bacterial transcriptional regulator H1D55_RS16705 PF00355 Rieske [2Fe-2S] domain H1D55_RS16715 PF00355 Rieske [2Fe-2S] domain H1D55_RS16725 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H1D55_RS16730 PF14759 Reductase C-terminal H1D55_RS16730 PF07992 Pyridine nucleotide-disulphide oxidoreductase H1D55_RS16735 PF07690 Major Facilitator Superfamily H1D55_RS16745 PF12697 Alpha/beta hydrolase family H1D55_RS16755 PF01958 Domain of unknown function DUF108 H1D55_RS16755 PF03447 Homoserine dehydrogenase, NAD binding domain H1D55_RS16760 PF00171 Aldehyde dehydrogenase family H1D55_RS16765 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain H1D55_RS16765 PF00205 Thiamine pyrophosphate enzyme, central domain H1D55_RS16765 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain H1D55_RS16775 PF07690 Major Facilitator Superfamily H1D55_RS16780 PF01327 Polypeptide deformylase H1D55_RS16785 PF04960 Glutaminase H1D55_RS16790 PF12833 Helix-turn-helix domain H1D55_RS16790 PF02311 AraC-like ligand binding domain H1D55_RS16795 PF07690 Major Facilitator Superfamily H1D55_RS16800 PF01263 Aldose 1-epimerase H1D55_RS16810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H1D55_RS16810 PF03466 LysR substrate binding domain H1D55_RS16820 PF07690 Major Facilitator Superfamily H1D55_RS16825 PF00456 Transketolase, thiamine diphosphate binding domain H1D55_RS16830 PF02779 Transketolase, pyrimidine binding domain H1D55_RS16830 PF02780 Transketolase, C-terminal domain H1D55_RS16835 PF02607 B12 binding domain H1D55_RS16835 PF02965 Vitamin B12 dependent methionine synthase, activation domain H1D55_RS16835 PF00809 Pterin binding enzyme H1D55_RS16835 PF02574 Homocysteine S-methyltransferase H1D55_RS16835 PF02310 B12 binding domain H1D55_RS16840 PF01384 Phosphate transporter family H1D55_RS16845 PF00291 Pyridoxal-phosphate dependent enzyme H1D55_RS16860 PF03781 Sulfatase-modifying factor enzyme 1 H1D55_RS16865 PF00884 Sulfatase H1D55_RS16875 PF01521 Iron-sulphur cluster biosynthesis H1D55_RS16875 PF01106 NifU-like domain H1D55_RS16880 PF00593 TonB dependent receptor H1D55_RS16880 PF07715 TonB-dependent Receptor Plug Domain H1D55_RS16890 PF00561 alpha/beta hydrolase fold H1D55_RS16895 PF00484 Carbonic anhydrase H1D55_RS16900 PF13472 GDSL-like Lipase/Acylhydrolase family H1D55_RS16905 PF00005 ABC transporter H1D55_RS16915 PF01694 Rhomboid family H1D55_RS16920 PF00912 Transglycosylase H1D55_RS16925 PF17941 Polyphosphate kinase C-terminal domain 1 H1D55_RS16925 PF13089 Polyphosphate kinase N-terminal domain H1D55_RS16925 PF13090 Polyphosphate kinase C-terminal domain 2 H1D55_RS16925 PF02503 Polyphosphate kinase middle domain H1D55_RS16940 PF03466 LysR substrate binding domain H1D55_RS16940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H1D55_RS16945 PF00561 alpha/beta hydrolase fold H1D55_RS16950 PF18113 Rubredoxin binding C-terminal domain H1D55_RS16950 PF07992 Pyridine nucleotide-disulphide oxidoreductase H1D55_RS16955 PF00301 Rubredoxin H1D55_RS16970 PF00152 tRNA synthetases class II (D, K and N) H1D55_RS16970 PF01336 OB-fold nucleic acid binding domain H1D55_RS16975 PF14052 Capsule assembly protein Wzi H1D55_RS16985 PF01507 Phosphoadenosine phosphosulfate reductase family H1D55_RS16990 PF00009 Elongation factor Tu GTP binding domain H1D55_RS17005 PF03600 Citrate transporter H1D55_RS17010 PF00571 CBS domain H1D55_RS17010 PF01595 Cyclin M transmembrane N-terminal domain H1D55_RS17010 PF03471 Transporter associated domain H1D55_RS17015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H1D55_RS17015 PF03466 LysR substrate binding domain H1D55_RS17020 PF00463 Isocitrate lyase family H1D55_RS17035 PF01774 UreD urease accessory protein H1D55_RS17040 PF00547 Urease, gamma subunit H1D55_RS17045 PF00699 Urease beta subunit H1D55_RS17050 PF01979 Amidohydrolase family H1D55_RS17050 PF00449 Urease alpha-subunit, N-terminal domain H1D55_RS17055 PF05194 UreE urease accessory protein, C-terminal domain H1D55_RS17055 PF02814 UreE urease accessory protein, N-terminal domain H1D55_RS17060 PF01730 UreF H1D55_RS17065 PF02492 CobW/HypB/UreG, nucleotide-binding domain H1D55_RS17080 PF03717 Penicillin-binding Protein dimerisation domain H1D55_RS17080 PF00905 Penicillin binding protein transpeptidase domain H1D55_RS17095 PF05191 Adenylate kinase, active site lid H1D55_RS17105 PF00730 HhH-GPD superfamily base excision DNA repair protein H1D55_RS17105 PF10576 Iron-sulfur binding domain of endonuclease III H1D55_RS17105 PF00633 Helix-hairpin-helix motif H1D55_RS17110 PF04060 Putative Fe-S cluster H1D55_RS17115 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase H1D55_RS17115 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain H1D55_RS17125 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase H1D55_RS17130 PF02590 Predicted SPOUT methyltransferase H1D55_RS17135 PF02190 ATP-dependent protease La (LON) substrate-binding domain H1D55_RS17135 PF05362 Lon protease (S16) C-terminal proteolytic domain H1D55_RS17135 PF00004 ATPase family associated with various cellular activities (AAA) H1D55_RS17140 PF05662 Coiled stalk of trimeric autotransporter adhesin H1D55_RS17140 PF13018 Extended Signal Peptide of Type V secretion system H1D55_RS17140 PF03895 YadA-like membrane anchor domain H1D55_RS17140 PF05658 Head domain of trimeric autotransporter adhesin H1D55_RS17145 PF00691 OmpA family H1D55_RS17145 PF04355 SmpA / OmlA family H1D55_RS17150 PF01812 5-formyltetrahydrofolate cyclo-ligase family H1D55_RS17470 PF01476 LysM domain H1D55_RS17470 PF08525 Opacity-associated protein A N-terminal motif H1D55_RS17470 PF01551 Peptidase family M23 H1D55_RS17520 PF08019 Phosphoethanolamine transferase EptA/EptB H1D55_RS17520 PF00884 Sulfatase H1D55_RS17555 PF05195 Aminopeptidase P, N-terminal domain H1D55_RS17555 PF00557 Metallopeptidase family M24 H1D55_RS17560 PF01494 FAD binding domain H1D55_RS17565 PF01494 FAD binding domain H1D55_RS17575 PF13411 MerR HTH family regulatory protein H1D55_RS17585 PF01810 LysE type translocator H1D55_RS17590 PF03466 LysR substrate binding domain H1D55_RS17590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H1D55_RS17600 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases H1D55_RS17605 PF02021 Uncharacterised protein family UPF0102 H1D55_RS17610 PF04972 BON domain H1D55_RS17620 PF09297 NADH pyrophosphatase zinc ribbon domain H1D55_RS17620 PF00293 NUDIX domain H1D55_RS17630 PF00929 Exonuclease H1D55_RS17635 PF01476 LysM domain H1D55_RS17635 PF01464 Transglycosylase SLT domain H1D55_RS17635 PF01476 LysM domain H1D55_RS17635 PF01464 Transglycosylase SLT domain H1D55_RS17640 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H1D55_RS17645 PF00528 Binding-protein-dependent transport system inner membrane component H1D55_RS17650 PF12911 N-terminal TM domain of oligopeptide transport permease C H1D55_RS17650 PF00528 Binding-protein-dependent transport system inner membrane component H1D55_RS17655 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H1D55_RS17655 PF00005 ABC transporter H1D55_RS17660 PF07992 Pyridine nucleotide-disulphide oxidoreductase H1D55_RS17660 PF00724 NADH:flavin oxidoreductase / NADH oxidase family H1D55_RS17665 PF07715 TonB-dependent Receptor Plug Domain H1D55_RS17665 PF00593 TonB dependent receptor H1D55_RS17675 PF00929 Exonuclease H1D55_RS17680 PF01979 Amidohydrolase family H1D55_RS17685 PF00360 Phytochrome region H1D55_RS17685 PF01590 GAF domain H1D55_RS17685 PF00563 EAL domain H1D55_RS17685 PF00990 Diguanylate cyclase, GGDEF domain H1D55_RS17690 PF00764 Arginosuccinate synthase H1D55_RS17695 PF07992 Pyridine nucleotide-disulphide oxidoreductase H1D55_RS17695 PF00724 NADH:flavin oxidoreductase / NADH oxidase family H1D55_RS17710 PF05987 Bacterial protein of unknown function (DUF898) H1D55_RS17715 PF03180 NLPA lipoprotein H1D55_RS17730 PF03783 Curli production assembly/transport component CsgG H1D55_RS17740 PF05643 Putative bacterial lipoprotein (DUF799) H1D55_RS17750 PF00324 Amino acid permease H1D55_RS17755 PF01266 FAD dependent oxidoreductase H1D55_RS17760 PF00324 Amino acid permease H1D55_RS17770 PF00392 Bacterial regulatory proteins, gntR family H1D55_RS17770 PF07729 FCD domain H1D55_RS17780 PF00171 Aldehyde dehydrogenase family H1D55_RS17790 PF00202 Aminotransferase class-III H1D55_RS17795 PF04958 Arginine N-succinyltransferase beta subunit H1D55_RS17800 PF00324 Amino acid permease H1D55_RS17825 PF00171 Aldehyde dehydrogenase family H1D55_RS17830 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term H1D55_RS17830 PF12833 Helix-turn-helix domain H1D55_RS17835 PF00892 EamA-like transporter family H1D55_RS17840 PF08666 SAF domain H1D55_RS17840 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus H1D55_RS17845 PF07690 Major Facilitator Superfamily H1D55_RS17850 PF13378 Enolase C-terminal domain-like H1D55_RS17855 PF00701 Dihydrodipicolinate synthetase family H1D55_RS17860 PF00171 Aldehyde dehydrogenase family H1D55_RS17865 PF00392 Bacterial regulatory proteins, gntR family H1D55_RS17865 PF07729 FCD domain H1D55_RS17870 PF07519 Tannase and feruloyl esterase H1D55_RS17885 PF03573 outer membrane porin, OprD family H1D55_RS17890 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H1D55_RS17890 PF02770 Acyl-CoA dehydrogenase, middle domain H1D55_RS17890 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H1D55_RS17910 PF13737 Transposase DDE domain H1D55_RS17915 PF18766 SWI2/SNF2 ATPase H1D55_RS17915 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) H1D55_RS17915 PF12008 Type I restriction and modification enzyme - subunit R C terminal H1D55_RS17925 PF01420 Type I restriction modification DNA specificity domain H1D55_RS17930 PF12161 HsdM N-terminal domain H1D55_RS17930 PF02384 N-6 DNA Methylase H1D55_RS17980 PF02216 B domain H1D55_RS17980 PF00746 LPXTG cell wall anchor motif H1D55_RS17980 PF01476 LysM domain H1D55_RS17980 PF03373 Octapeptide repeat H1D55_RS17980 PF04650 YSIRK type signal peptide H1D55_RS17995 PF02559 CarD-like/TRCF domain H1D55_RS17995 PF00270 DEAD/DEAH box helicase H1D55_RS17995 PF00271 Helicase conserved C-terminal domain H1D55_RS17995 PF03461 TRCF domain H1D55_RS17995 PF17757 UvrB interaction domain H1D55_RS18015 PF09383 NIL domain H1D55_RS18015 PF00005 ABC transporter H1D55_RS18195 PF01807 CHC2 zinc finger H1D55_RS18195 PF10410 DnaB-helicase binding domain of primase H1D55_RS18195 PF08275 DNA primase catalytic core, N-terminal domain H1D55_RS18230 PF00625 Guanylate kinase H1D55_RS18245 PF07015 VirC1 protein H1D55_RS18255 PF02899 Phage integrase, N-terminal SAM-like domain H1D55_RS18255 PF00589 Phage integrase family H1D55_RS18290 PF07733 Bacterial DNA polymerase III alpha NTPase domain H1D55_RS18290 PF17657 Bacterial DNA polymerase III alpha subunit finger domain H1D55_RS18290 PF14579 Helix-hairpin-helix motif H1D55_RS18290 PF02811 PHP domain H1D55_RS18300 PF07733 Bacterial DNA polymerase III alpha NTPase domain H1D55_RS18300 PF17657 Bacterial DNA polymerase III alpha subunit finger domain H1D55_RS18300 PF14579 Helix-hairpin-helix motif H1D55_RS18300 PF02811 PHP domain H1D55_RS18310 PF14579 Helix-hairpin-helix motif H1D55_RS18310 PF02811 PHP domain H1D55_RS18310 PF17657 Bacterial DNA polymerase III alpha subunit finger domain H1D55_RS18310 PF07733 Bacterial DNA polymerase III alpha NTPase domain H1D55_RS18325 PF01367 5'-3' exonuclease, C-terminal SAM fold H1D55_RS18325 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain H1D55_RS18325 PF00476 DNA polymerase family A H1D55_RS18325 PF01612 3'-5' exonuclease H1D55_RS18330 PF03161 LAGLIDADG DNA endonuclease family H1D55_RS18330 PF00154 recA bacterial DNA recombination protein H1D55_RS18355 PF06470 SMC proteins Flexible Hinge Domain H1D55_RS18355 PF02463 RecF/RecN/SMC N terminal domain H1D55_RS18375 PF03477 ATP cone domain H1D55_RS18375 PF02867 Ribonucleotide reductase, barrel domain H1D55_RS18375 PF00317 Ribonucleotide reductase, all-alpha domain H1D55_RS18380 PF00268 Ribonucleotide reductase, small chain H1D55_RS18415 PF13610 DDE domain H1D55_RS18425 PF00440 Bacterial regulatory proteins, tetR family H1D55_RS18425 PF02909 Tetracyclin repressor-like, C-terminal domain H1D55_RS18430 PF07690 Major Facilitator Superfamily H1D55_RS18440 PF00809 Pterin binding enzyme H1D55_RS18455 PF00929 Exonuclease H1D55_RS18535 PF12161 HsdM N-terminal domain H1D55_RS18535 PF02384 N-6 DNA Methylase H1D55_RS18550 PF12008 Type I restriction and modification enzyme - subunit R C terminal H1D55_RS18550 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) H1D55_RS18550 PF18766 SWI2/SNF2 ATPase H1D55_RS18560 PF05016 ParE toxin of type II toxin-antitoxin system, parDE H1D55_RS18565 PF02796 Helix-turn-helix domain of resolvase H1D55_RS18565 PF00239 Resolvase, N terminal domain H1D55_RS18575 PF13610 DDE domain H1D55_RS18580 PF01636 Phosphotransferase enzyme family H1D55_RS18585 PF13610 DDE domain H1D55_RS18595 PF00186 Dihydrofolate reductase H1D55_RS18615 PF02522 Aminoglycoside 3-N-acetyltransferase H1D55_RS18625 PF13610 DDE domain H1D55_RS18630 PF02796 Helix-turn-helix domain of resolvase H1D55_RS18630 PF00239 Resolvase, N terminal domain H1D55_RS18640 PF07690 Major Facilitator Superfamily H1D55_RS18655 PF00679 Elongation factor G C-terminus H1D55_RS18655 PF14492 Elongation Factor G, domain II H1D55_RS18655 PF03764 Elongation factor G, domain IV H1D55_RS18655 PF00009 Elongation factor Tu GTP binding domain H1D55_RS18690 PF02195 ParB-like nuclease domain H1D55_RS18690 PF08535 KorB domain H1D55_RS18690 PF06613 KorB C-terminal beta-barrel domain H1D55_RS18695 PF13614 AAA domain H1D55_RS18745 PF01131 DNA topoisomerase H1D55_RS18745 PF01751 Toprim domain H1D55_RS18745 PF01396 Topoisomerase DNA binding C4 zinc finger H1D55_RS18760 PF05101 Type IV secretory pathway, VirB3-like protein H1D55_RS18765 PF03135 CagE, TrbE, VirB family, component of type IV transporter system H1D55_RS18795 PF03743 Bacterial conjugation TrbI-like protein H1D55_RS18800 PF00437 Type II/IV secretion system protein