locus-tag	class	description
LQS91_RS00005	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
LQS91_RS00010	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
LQS91_RS00015	COG0596	Alpha beta hydrolase
LQS91_RS00040	COG0488	(ABC) transporter
LQS91_RS00045	COG0586	Pfam SNARE associated Golgi protein
LQS91_RS00055	COG0187	DNA topoisomerase II activity
LQS91_RS00065	COG0592	DNA-directed DNA polymerase activity
LQS91_RS00090	COG0706	membrane insertase activity
LQS91_RS00105	COG1230	cation diffusion facilitator family transporter
LQS91_RS00110	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
LQS91_RS00125	COG0402	S-adenosylhomocysteine deaminase activity
LQS91_RS00135	COG0754	glutathionylspermidine amidase activity
LQS91_RS00145	COG0861	Integral membrane protein TerC family
LQS91_RS00150	COG0671	phosphoesterase, PA-phosphatase related
LQS91_RS00160	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
LQS91_RS00175	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
LQS91_RS00180	COG2951	lytic endotransglycosylase activity
LQS91_RS00210	COG0583	DNA-binding transcription factor activity
LQS91_RS00230	COG0657	acetylesterase activity
LQS91_RS00235	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
LQS91_RS00275	COG1047	Peptidyl-prolyl cis-trans
LQS91_RS00285	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
LQS91_RS00290	COG0196	riboflavin kinase activity
LQS91_RS00300	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
LQS91_RS00305	COG1309	transcriptional regulator
LQS91_RS00310	COG1116	anion transmembrane transporter activity
LQS91_RS00315	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
LQS91_RS00320	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LQS91_RS00325	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
LQS91_RS00330	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
LQS91_RS00350	COG1028	Short-chain dehydrogenase reductase Sdr
LQS91_RS00355	COG0546	phosphoglycolate phosphatase activity
LQS91_RS00410	COG3023	N-Acetylmuramoyl-L-alanine amidase
LQS91_RS00415	COG0728	peptidoglycan biosynthetic process
LQS91_RS00445	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
LQS91_RS00460	COG0438	transferase activity, transferring glycosyl groups
LQS91_RS00475	COG0438	transferase activity, transferring glycosyl groups
LQS91_RS00480	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
LQS91_RS00490	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
LQS91_RS00500	COG1210	Utp--glucose-1-phosphate uridylyltransferase
LQS91_RS00515	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
LQS91_RS00525	COG2186	Transcriptional regulator
LQS91_RS00535	COG0277	FAD linked oxidase domain protein
LQS91_RS00540	COG1448	Aminotransferase
LQS91_RS00545	COG1802	Transcriptional regulator
LQS91_RS00560	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
LQS91_RS00610	COG0564	pseudouridine synthase activity
LQS91_RS00650	COG0251	oxidation-reduction process
LQS91_RS00655	COG1113	amino acid transport
LQS91_RS00660	COG1113	amino acid transport
LQS91_RS00680	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
LQS91_RS00685	COG1960	acyl-CoA dehydrogenase activity
LQS91_RS00690	COG1024	Enoyl-CoA hydratase
LQS91_RS00695	COG1024	Enoyl-CoA hydratase
LQS91_RS00700	COG0477	Major facilitator Superfamily
LQS91_RS00705	COG3916	Acyl-homoserine-lactone synthase
LQS91_RS00715	COG2197	response regulator
LQS91_RS00725	COG1960	acyl-CoA dehydrogenase activity
LQS91_RS00730	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LQS91_RS00730	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
LQS91_RS00730	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
LQS91_RS00730	COG3321	synthase
LQS91_RS00750	COG2267	carboxylic ester hydrolase activity
LQS91_RS00770	COG0271	Belongs to the BolA IbaG family
LQS91_RS00780	COG1192	Involved in chromosome partitioning
LQS91_RS00795	COG0586	Pfam SNARE associated Golgi protein
LQS91_RS00800	COG2259	Doxx family
LQS91_RS00805	COG4399	Belongs to the UPF0754 family
LQS91_RS00810	COG0518	GMP synthase (glutamine-hydrolyzing) activity
LQS91_RS00810	COG0519	Catalyzes the synthesis of GMP from XMP
LQS91_RS00855	COG0281	malic enzyme
LQS91_RS00860	COG2837	iron assimilation
LQS91_RS00865	COG1280	lysine exporter protein (LysE YggA)
LQS91_RS00870	COG1108	ABC-type Mn2 Zn2 transport systems permease components
LQS91_RS00875	COG1121	(ABC) transporter
LQS91_RS00940	COG0386	Belongs to the glutathione peroxidase family
LQS91_RS00955	COG1309	transcriptional regulator
LQS91_RS00960	COG0697	spore germination
LQS91_RS00970	COG0758	DNA mediated transformation
LQS91_RS01040	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
LQS91_RS01090	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
LQS91_RS01100	COG0477	Major facilitator Superfamily
LQS91_RS01110	COG1253	flavin adenine dinucleotide binding
LQS91_RS01115	COG3012	SEC-C Motif Domain Protein
LQS91_RS01120	COG2860	membrane
LQS91_RS01125	COG0477	Major facilitator Superfamily
LQS91_RS01135	COG0318	PFAM AMP-dependent synthetase and ligase
LQS91_RS01150	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
LQS91_RS01170	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
LQS91_RS01270	COG0789	Transcriptional regulator
LQS91_RS01395	COG0789	Transcriptional regulator
LQS91_RS01520	COG0789	Transcriptional regulator
LQS91_RS01645	COG0789	Transcriptional regulator
LQS91_RS01770	COG0789	Transcriptional regulator
LQS91_RS01895	COG0789	Transcriptional regulator
LQS91_RS02020	COG0789	Transcriptional regulator
LQS91_RS02080	COG0347	Belongs to the P(II) protein family
LQS91_RS02085	COG0004	ammonium transporteR
LQS91_RS02095	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LQS91_RS02095	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LQS91_RS02135	COG0795	lipopolysaccharide-transporting ATPase activity
LQS91_RS02140	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
LQS91_RS02145	COG0793	Belongs to the peptidase S41A family
LQS91_RS02160	COG2197	response regulator
LQS91_RS02170	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
LQS91_RS02180	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
LQS91_RS02185	COG4974	Belongs to the 'phage' integrase family
LQS91_RS02210	COG0772	Belongs to the SEDS family
LQS91_RS02215	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
LQS91_RS02220	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
LQS91_RS02225	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
LQS91_RS02250	COG0697	spore germination
LQS91_RS02255	COG1538	Outer membrane efflux protein
LQS91_RS02275	COG3275	phosphorelay sensor kinase activity
LQS91_RS02285	COG0181	hydroxymethylbilane synthase activity
LQS91_RS02330	COG1716	ATPase activity
LQS91_RS02335	COG0546	phosphoglycolate phosphatase activity
LQS91_RS02435	COG2056	Na+-H+ antiporter family
LQS91_RS02445	COG2826	transposase and inactivated derivatives, IS30 family
LQS91_RS02455	COG0326	Molecular chaperone. Has ATPase activity
LQS91_RS02470	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
LQS91_RS02530	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
LQS91_RS02535	COG2169	Transcriptional regulator
LQS91_RS02535	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
LQS91_RS02565	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
LQS91_RS02575	COG0497	DNA recombination
LQS91_RS02590	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LQS91_RS02600	COG0237	dephospho-CoA kinase activity
LQS91_RS02655	COG0195	Participates in both transcription termination and antitermination
LQS91_RS02670	COG1320	monovalent cation:proton antiporter activity
LQS91_RS02675	COG2212	antiporter activity
LQS91_RS02680	COG1863	multisubunit Na H antiporter MnhE subunit
LQS91_RS02685	COG0651	ATP synthesis coupled electron transport
LQS91_RS02690	COG1006	Multisubunit Na H antiporter MnhC subunit
LQS91_RS02695	COG2111	Na H antiporter
LQS91_RS02695	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
LQS91_RS02710	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
LQS91_RS02715	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LQS91_RS02730	COG2226	methyltransferase
LQS91_RS02750	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
LQS91_RS02755	COG1074	ATP-dependent DNA helicase activity
LQS91_RS02760	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
LQS91_RS02765	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
LQS91_RS02780	COG0598	Magnesium transport protein CorA
LQS91_RS02785	COG0789	Transcriptional regulator
LQS91_RS02790	COG0484	heat shock protein binding
LQS91_RS02805	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
LQS91_RS02805	COG0475	glutathione-regulated potassium exporter activity
LQS91_RS02810	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
LQS91_RS02830	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LQS91_RS02840	COG4535	Mg2 and Co2 transporter CorC
LQS91_RS02845	COG0425	Belongs to the sulfur carrier protein TusA family
LQS91_RS02855	COG0644	oxidoreductase
LQS91_RS02855	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
LQS91_RS02865	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
LQS91_RS02880	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LQS91_RS02885	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
LQS91_RS02895	COG0493	'glutamate synthase
LQS91_RS02895	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
LQS91_RS02920	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
LQS91_RS02935	COG0534	Mate efflux family protein
LQS91_RS02945	COG0635	Involved in the biosynthesis of porphyrin-containing compound
LQS91_RS02950	COG4221	oxidoreductase activity
LQS91_RS02955	COG0583	DNA-binding transcription factor activity
LQS91_RS02970	COG0318	PFAM AMP-dependent synthetase and ligase
LQS91_RS02975	COG1530	ribonuclease E activity
LQS91_RS02990	COG0546	phosphoglycolate phosphatase activity
LQS91_RS02995	COG2378	regulation of single-species biofilm formation
LQS91_RS03000	COG0625	glutathione transferase activity
LQS91_RS03010	COG0583	DNA-binding transcription factor activity
LQS91_RS03065	COG0473	3-isopropylmalate dehydrogenase activity
LQS91_RS03120	COG1301	dicarboxylic acid transport
LQS91_RS03130	COG1560	Kdo2-lipid A biosynthetic process
LQS91_RS03135	COG1280	lysine exporter protein (LysE YggA)
LQS91_RS03140	COG0488	(ABC) transporter
LQS91_RS03145	COG2900	Belongs to the SlyX family
LQS91_RS03155	COG1733	regulation of RNA biosynthetic process
LQS91_RS03180	COG0210	DNA helicase
LQS91_RS03185	COG0724	RNA recognition motif
LQS91_RS03205	COG4651	solute:proton antiporter activity
LQS91_RS03205	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
LQS91_RS03230	COG0788	formyltetrahydrofolate deformylase activity
LQS91_RS03330	COG2813	Specifically methylates the guanine in position
LQS91_RS03330	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
LQS91_RS03340	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
LQS91_RS03350	COG4774	siderophore transport
LQS91_RS03360	COG0740	serine-type endopeptidase activity
LQS91_RS03380	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
LQS91_RS03380	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
LQS91_RS03385	COG0280	phosphate acetyltransferase
LQS91_RS03385	COG0857	belongs to the CobB CobQ family
LQS91_RS03390	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
LQS91_RS03400	COG0800	Aldolase
LQS91_RS03410	COG3265	gluconokinase activity
LQS91_RS03415	COG1012	belongs to the aldehyde dehydrogenase family
LQS91_RS03425	COG2267	carboxylic ester hydrolase activity
LQS91_RS03440	COG0793	Belongs to the peptidase S41A family
LQS91_RS03475	COG1426	Protein conserved in bacteria
LQS91_RS03515	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
LQS91_RS03525	COG1162	GTPase activity
LQS91_RS03530	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
LQS91_RS03545	COG1538	Outer membrane efflux protein
LQS91_RS03550	COG0577	efflux transmembrane transporter activity
LQS91_RS03550	COG1136	(ABC) transporter
LQS91_RS03555	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LQS91_RS03580	COG0028	Belongs to the TPP enzyme family
LQS91_RS03585	COG0440	acetolactate synthase activity
LQS91_RS03620	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
LQS91_RS03635	COG0084	hydrolase, TatD family'
LQS91_RS03645	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
LQS91_RS03655	COG0583	DNA-binding transcription factor activity
LQS91_RS03665	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LQS91_RS03755	COG2205	protein histidine kinase activity
LQS91_RS03775	COG2132	Multicopper oxidase
LQS91_RS03795	COG2814	Major facilitator Superfamily
LQS91_RS03805	COG0697	spore germination
LQS91_RS03835	COG3622	Belongs to the hyi family
LQS91_RS03840	COG2084	Dehydrogenase
LQS91_RS03845	COG1024	Enoyl-CoA hydratase
LQS91_RS03850	COG0784	Response regulator, receiver
LQS91_RS03850	COG5002	protein histidine kinase activity
LQS91_RS03850	COG2205	protein histidine kinase activity
LQS91_RS03870	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
LQS91_RS03880	COG3956	TIGRFAM MazG family protein
LQS91_RS03885	COG1555	photosystem II stabilization
LQS91_RS03890	COG0617	tRNA 3'-terminal CCA addition
LQS91_RS03895	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
LQS91_RS03915	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
LQS91_RS03920	COG3028	Belongs to the UPF0307 family
LQS91_RS03925	COG0318	PFAM AMP-dependent synthetase and ligase
LQS91_RS03940	COG0625	glutathione transferase activity
LQS91_RS03945	COG1238	metal cluster binding
LQS91_RS03985	COG0072	phenylalanine-tRNA ligase activity
LQS91_RS04015	COG0248	Ppx GppA phosphatase
LQS91_RS04025	COG0037	tRNA processing
LQS91_RS04065	COG1764	response to oxidative stress
LQS91_RS04070	COG1846	Transcriptional regulator
LQS91_RS04080	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
LQS91_RS04140	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
LQS91_RS04145	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
LQS91_RS04150	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
LQS91_RS04160	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
LQS91_RS04210	COG1214	PFAM Peptidase M22, glycoprotease
LQS91_RS04225	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
LQS91_RS04235	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
LQS91_RS04240	COG0561	phosphatase activity
LQS91_RS04250	COG2132	Multicopper oxidase
LQS91_RS04255	COG3667	copper resistance
LQS91_RS04270	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
LQS91_RS04275	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
LQS91_RS04280	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
LQS91_RS04310	COG1063	alcohol dehydrogenase
LQS91_RS04315	COG0583	DNA-binding transcription factor activity
LQS91_RS04320	COG1960	acyl-CoA dehydrogenase activity
LQS91_RS04325	COG2814	Major facilitator Superfamily
LQS91_RS04330	COG1804	L-carnitine dehydratase bile acid-inducible protein F
LQS91_RS04340	COG1053	succinate dehydrogenase
LQS91_RS04345	COG0583	DNA-binding transcription factor activity
LQS91_RS04360	COG0583	DNA-binding transcription factor activity
LQS91_RS04390	COG0583	DNA-binding transcription factor activity
LQS91_RS04405	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
LQS91_RS04410	COG1309	transcriptional regulator
LQS91_RS04440	COG0384	phenazine biosynthesis protein PhzF
LQS91_RS04450	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LQS91_RS04470	COG0745	RESPONSE REGULATOR receiver
LQS91_RS04510	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
LQS91_RS04540	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
LQS91_RS04545	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LQS91_RS04570	COG0583	DNA-binding transcription factor activity
LQS91_RS04590	COG0668	transmembrane transport
LQS91_RS04600	COG2081	HI0933 family
LQS91_RS04605	COG2515	1-aminocyclopropane-1-carboxylate deaminase
LQS91_RS04635	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LQS91_RS04635	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LQS91_RS04645	COG0489	protein tyrosine kinase activity
LQS91_RS04695	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LQS91_RS04705	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
LQS91_RS04720	COG0730	response to heat
LQS91_RS04730	COG1196	nuclear chromosome segregation
LQS91_RS04750	COG2223	nitrite transmembrane transporter activity
LQS91_RS04755	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
LQS91_RS04760	COG1877	trehalose-phosphatase activity
LQS91_RS04765	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
LQS91_RS04765	COG2226	methyltransferase
LQS91_RS04765	COG0596	Alpha beta hydrolase
LQS91_RS04780	COG4106	trans-aconitate 2-methyltransferase activity
LQS91_RS04795	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
LQS91_RS04800	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
LQS91_RS04805	COG0009	L-threonylcarbamoyladenylate synthase
LQS91_RS04810	COG3101	peptidyl-lysine hydroxylation
LQS91_RS04815	COG1399	metal-binding, possibly nucleic acid-binding protein
LQS91_RS04840	COG1652	LysM domain
LQS91_RS04845	COG0351	phosphomethylpyrimidine kinase
LQS91_RS04845	COG0352	thiamine-phosphate diphosphorylase activity
LQS91_RS04845	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
LQS91_RS04855	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
LQS91_RS04885	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
LQS91_RS04915	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
LQS91_RS04930	COG0358	DNA primase activity
LQS91_RS04940	COG0564	pseudouridine synthase activity
LQS91_RS04965	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
LQS91_RS04985	COG0583	DNA-binding transcription factor activity
LQS91_RS04990	COG0473	3-isopropylmalate dehydrogenase activity
LQS91_RS05000	COG0657	acetylesterase activity
LQS91_RS05010	COG1012	belongs to the aldehyde dehydrogenase family
LQS91_RS05030	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
LQS91_RS05030	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
LQS91_RS05045	COG1981	membrane
LQS91_RS05090	COG0456	acetyltransferase
LQS91_RS05100	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
LQS91_RS05105	COG0492	ferredoxin-NADP+ reductase activity
LQS91_RS05110	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
LQS91_RS05110	COG1674	ftsk spoiiie
LQS91_RS05115	COG1280	lysine exporter protein (LysE YggA)
LQS91_RS05130	COG2894	cell division
LQS91_RS05145	COG0204	Acyl-transferase
LQS91_RS05150	COG2885	chlorophyll binding
LQS91_RS05155	COG0210	DNA helicase
LQS91_RS05165	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
LQS91_RS05180	COG0121	glutamine amidotransferase
LQS91_RS05200	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
LQS91_RS05205	COG0735	belongs to the Fur family
LQS91_RS05230	COG0420	3'-5' exonuclease activity
LQS91_RS05250	COG1090	epimerase
LQS91_RS05265	COG2050	protein possibly involved in aromatic compounds catabolism
LQS91_RS05275	COG2814	Major facilitator Superfamily
LQS91_RS05280	COG0405	Gamma-glutamyltransferase
LQS91_RS05325	COG0589	response to stress
LQS91_RS05330	COG0659	secondary active sulfate transmembrane transporter activity
LQS91_RS05340	COG1002	Type II restriction enzyme, methylase subunits
LQS91_RS05345	COG1061	Type III restriction enzyme res subunit
LQS91_RS05390	COG0084	hydrolase, TatD family'
LQS91_RS05410	COG0477	Major facilitator Superfamily
LQS91_RS05415	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
LQS91_RS05425	COG1595	DNA-templated transcription, initiation
LQS91_RS05480	COG0531	amino acid
LQS91_RS05485	COG2040	homocysteine
LQS91_RS05510	COG1309	transcriptional regulator
LQS91_RS05515	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
LQS91_RS05520	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
LQS91_RS05530	COG1607	acyl-coa hydrolase
LQS91_RS05540	COG0523	cobalamin synthesis protein
LQS91_RS05550	COG4681	YaeQ
LQS91_RS05560	COG0726	polysaccharide deacetylase
LQS91_RS05560	COG1649	PFAM Uncharacterised BCR, COG1649
LQS91_RS05565	COG1215	transferase activity, transferring glycosyl groups
LQS91_RS05575	COG1024	Enoyl-CoA hydratase
LQS91_RS05590	COG1414	Transcriptional regulator
LQS91_RS05610	COG1028	Short-chain dehydrogenase reductase Sdr
LQS91_RS05620	COG0446	pyridine nucleotide-disulphide oxidoreductase
LQS91_RS05625	COG2271	Major facilitator Superfamily
LQS91_RS05635	COG2267	carboxylic ester hydrolase activity
LQS91_RS05640	COG1028	Short-chain dehydrogenase reductase Sdr
LQS91_RS05655	COG0028	Belongs to the TPP enzyme family
LQS91_RS05665	COG0477	Major facilitator Superfamily
LQS91_RS05670	COG0242	peptide deformylase activity
LQS91_RS05675	COG2066	Belongs to the glutaminase family
LQS91_RS05680	COG2207	Transcriptional regulator
LQS91_RS05685	COG2223	nitrite transmembrane transporter activity
LQS91_RS05700	COG0583	DNA-binding transcription factor activity
LQS91_RS05705	COG1028	Short-chain dehydrogenase reductase Sdr
LQS91_RS05710	COG2271	Major facilitator Superfamily
LQS91_RS05715	COG3959	Transketolase, thiamine diphosphate binding domain
LQS91_RS05720	COG3958	Transketolase
LQS91_RS05730	COG0306	phosphate transporter
LQS91_RS05750	COG1262	PFAM Formylglycine-generating sulfatase enzyme
LQS91_RS05795	COG4181	ATPase activity
LQS91_RS05800	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
LQS91_RS05830	COG0583	DNA-binding transcription factor activity
LQS91_RS05840	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
LQS91_RS05845	COG1773	rubredoxin
LQS91_RS05895	COG2851	Citrate transporter
LQS91_RS05900	COG1253	flavin adenine dinucleotide binding
LQS91_RS05940	COG0804	urea catabolic process
LQS91_RS05950	COG0830	nickel cation binding
LQS91_RS05965	COG0742	ribosomal rna small subunit methyltransferase
LQS91_RS05970	COG0768	penicillin binding
LQS91_RS05995	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
LQS91_RS06000	COG2878	Part of a membrane complex involved in electron transport
LQS91_RS06005	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
LQS91_RS06015	COG3384	dioxygenase
LQS91_RS06035	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
LQS91_RS06120	COG3620	sequence-specific DNA binding
LQS91_RS06220	COG5410	chromosome segregation
LQS91_RS06330	COG3561	AntA/AntB antirepressor
LQS91_RS06345	COG0739	heme binding
LQS91_RS06400	COG1278	Cold shock
LQS91_RS06440	COG0006	proline dipeptidase activity
LQS91_RS06445	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LQS91_RS06450	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LQS91_RS06470	COG1279	arginine transmembrane transporter activity
LQS91_RS06475	COG0583	DNA-binding transcription factor activity
LQS91_RS06515	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
LQS91_RS06520	COG1388	LysM domain
LQS91_RS06520	COG0741	lytic transglycosylase activity
LQS91_RS06520	COG1388	LysM domain
LQS91_RS06520	COG0741	lytic transglycosylase activity
LQS91_RS06530	COG4174	ABC transporter (Permease)
LQS91_RS06535	COG4239	(ABC) transporter, permease
LQS91_RS06540	COG4172	Belongs to the ABC transporter superfamily
LQS91_RS06595	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
LQS91_RS06605	COG3706	GGDEF domain
LQS91_RS06605	COG4251	negative regulation of phosphorylation
LQS91_RS06605	COG5001	Diguanylate cyclase
LQS91_RS06605	COG2203	Gaf domain
LQS91_RS06615	COG0446	pyridine nucleotide-disulphide oxidoreductase
LQS91_RS06615	COG1902	pentaerythritol trinitrate reductase activity
LQS91_RS06625	COG0582	viral genome integration into host DNA
LQS91_RS06695	COG3152	Membrane
LQS91_RS06720	COG2184	nucleotidyltransferase activity
LQS91_RS06730	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
LQS91_RS06770	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
LQS91_RS06805	COG3209	COG3209 Rhs family protein
LQS91_RS06840	COG1113	amino acid transport
LQS91_RS06870	COG1012	belongs to the aldehyde dehydrogenase family
LQS91_RS06890	COG1113	amino acid transport
LQS91_RS06920	COG0697	spore germination
LQS91_RS06925	COG2721	sulfolactate sulfo-lyase activity
LQS91_RS06930	COG2271	Major facilitator Superfamily
LQS91_RS06935	COG4948	Mandelate Racemase Muconate Lactonizing
LQS91_RS06945	COG1012	belongs to the aldehyde dehydrogenase family
LQS91_RS06950	COG2186	Transcriptional regulator
LQS91_RS06975	COG1960	acyl-CoA dehydrogenase activity
LQS91_RS06985	COG1012	belongs to the aldehyde dehydrogenase family
LQS91_RS06990	COG1024	Enoyl-CoA hydratase
LQS91_RS06995	COG2814	Major facilitator Superfamily
LQS91_RS07010	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
LQS91_RS07055	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
LQS91_RS07060	COG2072	flavoprotein involved in K transport
LQS91_RS07065	COG0300	oxidoreductase activity
LQS91_RS07090	COG1741	Belongs to the pirin family
LQS91_RS07105	COG2072	flavoprotein involved in K transport
LQS91_RS07115	COG2252	PERMEase
LQS91_RS07120	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
LQS91_RS07125	COG3038	cytochrome b561
LQS91_RS07135	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
LQS91_RS07145	COG0527	aspartate kinase activity
LQS91_RS07155	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
LQS91_RS07165	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
LQS91_RS07180	COG0667	Aldo Keto reductase
LQS91_RS07195	COG1765	OsmC-like protein
LQS91_RS07210	COG0542	response to heat
LQS91_RS07245	COG2885	chlorophyll binding
LQS91_RS07255	COG0625	glutathione transferase activity
LQS91_RS07260	COG0220	tRNA (guanine-N7-)-methyltransferase activity
LQS91_RS07280	COG3634	alkyl hydroperoxide reductase activity
LQS91_RS07290	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
LQS91_RS07300	COG0450	alkyl hydroperoxide reductase
LQS91_RS07305	COG1643	Atp-dependent helicase
LQS91_RS07320	COG2814	Major facilitator Superfamily
LQS91_RS07325	COG3135	benzoate transporter
LQS91_RS07330	COG1028	Short-chain dehydrogenase reductase Sdr
LQS91_RS07335	COG0543	2 iron, 2 sulfur cluster binding
LQS91_RS07335	COG0633	Ferredoxin
LQS91_RS07345	COG4638	Rieske (2fe-2S)
LQS91_RS07355	COG0583	DNA-binding transcription factor activity
LQS91_RS07405	COG1570	exodeoxyribonuclease VII activity
LQS91_RS07435	COG1280	lysine exporter protein (LysE YggA)
LQS91_RS07440	COG1278	Cold shock
LQS91_RS07475	COG2814	Major facilitator Superfamily
LQS91_RS07545	COG5410	chromosome segregation
LQS91_RS07550	COG3567	Phage-associated protein, HI1409 family
LQS91_RS07570	COG3566	protein conserved in bacteria
LQS91_RS07585	COG5434	Belongs to the glycosyl hydrolase 28 family
LQS91_RS07645	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
LQS91_RS07655	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
LQS91_RS07660	COG1137	ATPase activity
LQS91_RS07665	COG1538	Outer membrane efflux protein
LQS91_RS07695	COG4122	O-methyltransferase activity
LQS91_RS07705	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
LQS91_RS07720	COG1522	sequence-specific DNA binding
LQS91_RS07725	COG5006	permease, DMT superfamily
LQS91_RS07735	COG1560	Kdo2-lipid A biosynthetic process
LQS91_RS07750	COG2814	Major facilitator Superfamily
LQS91_RS07770	COG1250	3-hydroxyacyl-CoA dehydrogenase
LQS91_RS07815	COG3209	COG3209 Rhs family protein
LQS91_RS07835	COG0583	DNA-binding transcription factor activity
LQS91_RS07840	COG1914	H( )-stimulated, divalent metal cation uptake system
LQS91_RS07860	COG4770	biotin carboxylase activity
LQS91_RS07865	COG0038	chloride channel
LQS91_RS07890	COG1309	transcriptional regulator
LQS91_RS07900	COG1063	alcohol dehydrogenase
LQS91_RS07915	COG0439	Biotin carboxylase
LQS91_RS07920	COG2249	NAD(P)H dehydrogenase (quinone) activity
LQS91_RS07925	COG1733	regulation of RNA biosynthetic process
LQS91_RS07935	COG0864	Transcriptional regulator
LQS91_RS07945	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LQS91_RS07950	COG1116	anion transmembrane transporter activity
LQS91_RS08080	COG0590	tRNA wobble adenosine to inosine editing
LQS91_RS08085	COG2807	transmembrane transport
LQS91_RS08100	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
LQS91_RS08110	COG0789	Transcriptional regulator
LQS91_RS08120	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
LQS91_RS08140	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LQS91_RS08165	COG1012	belongs to the aldehyde dehydrogenase family
LQS91_RS08170	COG0531	amino acid
LQS91_RS08175	COG1760	l-serine dehydratase
LQS91_RS08180	COG2030	dehydratase
LQS91_RS08180	COG1012	belongs to the aldehyde dehydrogenase family
LQS91_RS08185	COG3396	Phenylacetate-CoA oxygenase
LQS91_RS08190	COG3460	Phenylacetate-CoA oxygenase
LQS91_RS08195	COG3396	Phenylacetate-CoA oxygenase
LQS91_RS08200	COG2151	metal-sulfur cluster biosynthetic enzyme
LQS91_RS08205	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
LQS91_RS08210	COG1024	Enoyl-CoA hydratase
LQS91_RS08215	COG1024	Enoyl-CoA hydratase
LQS91_RS08220	COG1250	3-hydroxyacyl-CoA dehydrogenase
LQS91_RS08225	COG0183	Belongs to the thiolase family
LQS91_RS08230	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
LQS91_RS08235	COG3327	negative regulation of DNA-templated transcription, initiation
LQS91_RS08245	COG2050	protein possibly involved in aromatic compounds catabolism
LQS91_RS08250	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
LQS91_RS08255	COG0210	DNA helicase
LQS91_RS08290	COG1278	Cold shock
LQS91_RS08320	COG1804	L-carnitine dehydratase bile acid-inducible protein F
LQS91_RS08325	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
LQS91_RS08330	COG2271	Major facilitator Superfamily
LQS91_RS08335	COG0753	catalase activity
LQS91_RS08340	COG3038	cytochrome b561
LQS91_RS08360	COG2267	carboxylic ester hydrolase activity
LQS91_RS08365	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
LQS91_RS08370	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LQS91_RS08375	COG1012	belongs to the aldehyde dehydrogenase family
LQS91_RS08385	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
LQS91_RS08395	COG1012	belongs to the aldehyde dehydrogenase family
LQS91_RS08400	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
LQS91_RS08405	COG0583	DNA-binding transcription factor activity
LQS91_RS08415	COG1414	Transcriptional regulator
LQS91_RS08420	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LQS91_RS08430	COG1840	ABC-type Fe3 transport system, periplasmic component
LQS91_RS08435	COG3842	ATPase activity
LQS91_RS08450	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
LQS91_RS08455	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
LQS91_RS08460	COG2814	Major facilitator Superfamily
LQS91_RS08465	COG1960	acyl-CoA dehydrogenase activity
LQS91_RS08470	COG1804	L-carnitine dehydratase bile acid-inducible protein F
LQS91_RS08480	COG1024	Enoyl-CoA hydratase
LQS91_RS08490	COG2814	Major facilitator Superfamily
LQS91_RS08500	COG0183	Belongs to the thiolase family
LQS91_RS08505	COG1250	3-hydroxyacyl-CoA dehydrogenase
LQS91_RS08510	COG1028	Short-chain dehydrogenase reductase Sdr
LQS91_RS08515	COG1024	Enoyl-CoA hydratase
LQS91_RS08520	COG1960	acyl-CoA dehydrogenase activity
LQS91_RS08525	COG2814	Major facilitator Superfamily
LQS91_RS08530	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
LQS91_RS08535	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
LQS91_RS08545	COG2814	Major facilitator Superfamily
LQS91_RS08555	COG1960	acyl-CoA dehydrogenase activity
LQS91_RS08570	COG0583	DNA-binding transcription factor activity
LQS91_RS08580	COG4770	biotin carboxylase activity
LQS91_RS08585	COG1024	Enoyl-CoA hydratase
LQS91_RS08590	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
LQS91_RS08595	COG1960	acyl-CoA dehydrogenase activity
LQS91_RS08600	COG1309	transcriptional regulator
LQS91_RS08605	COG0318	PFAM AMP-dependent synthetase and ligase
LQS91_RS08625	COG0583	DNA-binding transcription factor activity
LQS91_RS08675	COG1028	Short-chain dehydrogenase reductase Sdr
LQS91_RS08720	COG2205	protein histidine kinase activity
LQS91_RS08720	COG0784	Response regulator, receiver
LQS91_RS08740	COG0765	amino acid transport
LQS91_RS08745	COG0765	amino acid transport
LQS91_RS08750	COG1126	abc transporter atp-binding protein
LQS91_RS08755	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LQS91_RS08760	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LQS91_RS08775	COG1280	lysine exporter protein (LysE YggA)
LQS91_RS08785	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
LQS91_RS08790	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
LQS91_RS08795	COG1045	serine acetyltransferase
LQS91_RS08810	COG0583	DNA-binding transcription factor activity
LQS91_RS08815	COG0625	glutathione transferase activity
LQS91_RS08820	COG0625	glutathione transferase activity
LQS91_RS08825	COG0583	DNA-binding transcription factor activity
LQS91_RS08835	COG1346	cytolysis
LQS91_RS08840	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LQS91_RS08855	COG2814	Major facilitator Superfamily
LQS91_RS08865	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
LQS91_RS08870	COG3052	prosthetic group binding
LQS91_RS08890	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
LQS91_RS08910	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LQS91_RS08920	COG1294	oxidase, subunit
LQS91_RS08925	COG1271	oxidase subunit
LQS91_RS08945	COG0477	Major facilitator Superfamily
LQS91_RS08955	COG4521	taurine ABC transporter
LQS91_RS08960	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
LQS91_RS08965	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
LQS91_RS08970	COG2175	clavaminate synthase activity
LQS91_RS08980	COG1953	Uracil, thiamine, allantoin
LQS91_RS08990	COG0583	DNA-binding transcription factor activity
LQS91_RS09000	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
LQS91_RS09015	COG0640	Transcriptional regulator
LQS91_RS09020	COG0798	PFAM Bile acid sodium symporter
LQS91_RS09025	COG0583	DNA-binding transcription factor activity
LQS91_RS09040	COG3634	alkyl hydroperoxide reductase activity
LQS91_RS09075	COG1301	dicarboxylic acid transport
LQS91_RS09080	COG0436	Aminotransferase
LQS91_RS09090	COG0386	Belongs to the glutathione peroxidase family
LQS91_RS09130	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
LQS91_RS09155	COG0012	GTP binding
LQS91_RS09160	COG2011	ABC-type metal ion transport system permease component
LQS91_RS09165	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
LQS91_RS09175	COG1464	Belongs to the NlpA lipoprotein family
LQS91_RS09205	COG0765	amino acid transport
LQS91_RS09210	COG0765	amino acid transport
LQS91_RS09215	COG1126	abc transporter atp-binding protein
LQS91_RS09225	COG1522	sequence-specific DNA binding
LQS91_RS09240	COG1309	transcriptional regulator
LQS91_RS09260	COG0583	DNA-binding transcription factor activity
LQS91_RS09270	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
LQS91_RS09280	COG0697	spore germination
LQS91_RS09305	COG3121	Chaperone
LQS91_RS09310	COG3539	Fimbrial protein
LQS91_RS09335	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
LQS91_RS09335	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
LQS91_RS09380	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
LQS91_RS09390	COG2353	YceI-like domain
LQS91_RS09400	COG3698	Phosphodiester glycosidase
LQS91_RS09415	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
LQS91_RS09420	COG0506	proline dehydrogenase activity
LQS91_RS09420	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
LQS91_RS09420	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
LQS91_RS09430	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LQS91_RS09435	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
LQS91_RS09455	COG1132	(ABC) transporter
LQS91_RS09460	COG3122	Protein conserved in bacteria
LQS91_RS09465	COG3619	membrane
LQS91_RS09475	COG0640	Transcriptional regulator
LQS91_RS09485	COG2850	peptidyl-arginine hydroxylation
LQS91_RS09490	COG0424	maF-like protein
LQS91_RS09510	COG0191	fructose-bisphosphate aldolase activity
LQS91_RS09515	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
LQS91_RS09530	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
LQS91_RS09540	COG1192	Involved in chromosome partitioning
LQS91_RS09545	COG1475	DNA binding
LQS91_RS09550	COG0811	peptide transport
LQS91_RS09560	COG1132	(ABC) transporter
LQS91_RS09565	COG1663	tetraacyldisaccharide 4'-kinase activity
LQS91_RS09585	COG0084	hydrolase, TatD family'
LQS91_RS09650	COG0776	regulation of translation
LQS91_RS09680	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
LQS91_RS09685	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
LQS91_RS09710	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
LQS91_RS09730	COG0339	signal peptide processing
LQS91_RS09740	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LQS91_RS09775	COG0702	epimerase
LQS91_RS09780	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
LQS91_RS09800	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
LQS91_RS09830	COG0316	Belongs to the HesB IscA family
LQS91_RS09835	COG0822	iron-sulfur transferase activity
LQS91_RS09860	COG0776	regulation of translation
LQS91_RS09865	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
LQS91_RS09870	COG2207	Transcriptional regulator
LQS91_RS09875	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LQS91_RS09880	COG1960	acyl-CoA dehydrogenase activity
LQS91_RS09885	COG1960	acyl-CoA dehydrogenase activity
LQS91_RS09900	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
LQS91_RS09915	COG2814	Major facilitator Superfamily
LQS91_RS09920	COG4264	IucA IucC family
LQS91_RS09925	COG4264	IucA IucC family
LQS91_RS09935	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
LQS91_RS09965	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
LQS91_RS09980	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
LQS91_RS09985	COG0406	alpha-ribazole phosphatase activity
LQS91_RS10000	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
LQS91_RS10005	COG0730	response to heat
LQS91_RS10025	COG4773	Receptor
LQS91_RS10030	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
LQS91_RS10085	COG2226	methyltransferase
LQS91_RS10110	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
LQS91_RS10145	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
LQS91_RS10155	COG0133	tryptophan synthase activity
LQS91_RS10170	COG3706	GGDEF domain
LQS91_RS10185	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
LQS91_RS10190	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
LQS91_RS10195	COG0022	dehydrogenase e1 component
LQS91_RS10200	COG0508	dehydrogenase complex catalyzes the overall conversion of
LQS91_RS10205	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LQS91_RS10215	COG1063	alcohol dehydrogenase
LQS91_RS10220	COG3781	membrane
LQS91_RS10230	COG3453	Protein conserved in bacteria
LQS91_RS10230	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LQS91_RS10245	COG0730	response to heat
LQS91_RS10260	COG3708	Transcriptional regulator
LQS91_RS10260	COG2207	Transcriptional regulator
LQS91_RS10265	COG1733	regulation of RNA biosynthetic process
LQS91_RS10270	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
LQS91_RS10280	COG2188	Transcriptional regulator
LQS91_RS10295	COG4521	taurine ABC transporter
LQS91_RS10300	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
LQS91_RS10320	COG0477	Major facilitator Superfamily
LQS91_RS10330	COG1027	Aspartate ammonia-lyase
LQS91_RS10345	COG0583	DNA-binding transcription factor activity
LQS91_RS10350	COG0583	DNA-binding transcription factor activity
LQS91_RS10355	COG0183	Belongs to the thiolase family
LQS91_RS10360	COG2031	fatty acid transporter
LQS91_RS10375	COG0583	DNA-binding transcription factor activity
LQS91_RS10385	COG2610	gluconate transmembrane transporter activity
LQS91_RS10390	COG1028	Short-chain dehydrogenase reductase Sdr
LQS91_RS10395	COG2207	Transcriptional regulator
LQS91_RS10410	COG1028	Short-chain dehydrogenase reductase Sdr
LQS91_RS10420	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
LQS91_RS10435	COG0543	2 iron, 2 sulfur cluster binding
LQS91_RS10435	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
LQS91_RS10440	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
LQS91_RS10445	COG4638	Rieske (2fe-2S)
LQS91_RS10455	COG0725	ABC transporter, periplasmic molybdate-binding protein
LQS91_RS10465	COG4149	molybdate abc transporter
LQS91_RS10470	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
LQS91_RS10475	COG1028	Short-chain dehydrogenase reductase Sdr
LQS91_RS10480	COG1535	isochorismatase
LQS91_RS10480	COG3433	isochorismatase activity
LQS91_RS10540	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LQS91_RS10555	COG0753	catalase activity
LQS91_RS10565	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
LQS91_RS10590	COG3539	Fimbrial protein
LQS91_RS10610	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LQS91_RS10625	COG2072	flavoprotein involved in K transport
LQS91_RS10635	COG1538	Outer membrane efflux protein
LQS91_RS10640	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LQS91_RS10645	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LQS91_RS10650	COG0745	RESPONSE REGULATOR receiver
LQS91_RS10655	COG2205	protein histidine kinase activity
LQS91_RS10665	COG2207	Transcriptional regulator
LQS91_RS10680	COG1028	Short-chain dehydrogenase reductase Sdr
LQS91_RS10690	COG1073	alpha beta
LQS91_RS10725	COG0556	nucleotide-excision repair
LQS91_RS10740	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
LQS91_RS10800	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
LQS91_RS10815	COG2084	Dehydrogenase
LQS91_RS10825	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LQS91_RS10830	COG0583	DNA-binding transcription factor activity
LQS91_RS10840	COG0129	dihydroxy-acid dehydratase activity
LQS91_RS10845	COG1012	belongs to the aldehyde dehydrogenase family
LQS91_RS10860	COG1566	PFAM secretion protein HlyD family protein
LQS91_RS10875	COG0583	DNA-binding transcription factor activity
LQS91_RS10965	COG2188	Transcriptional regulator
LQS91_RS11025	COG1473	amidohydrolase
LQS91_RS11035	COG0475	glutathione-regulated potassium exporter activity
LQS91_RS11035	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
LQS91_RS11045	COG0583	DNA-binding transcription factor activity
LQS91_RS11050	COG1335	isochorismatase
LQS91_RS11070	COG1902	pentaerythritol trinitrate reductase activity
LQS91_RS11080	COG4689	acetoacetate decarboxylase
LQS91_RS11095	COG1309	transcriptional regulator
LQS91_RS11135	COG0446	pyridine nucleotide-disulphide oxidoreductase
LQS91_RS11135	COG1902	pentaerythritol trinitrate reductase activity
LQS91_RS11150	COG1012	belongs to the aldehyde dehydrogenase family
LQS91_RS11170	COG2186	Transcriptional regulator
LQS91_RS11180	COG0583	DNA-binding transcription factor activity
LQS91_RS11185	COG4948	Mandelate Racemase Muconate Lactonizing
LQS91_RS11190	COG4829	muconolactone delta-isomerase
LQS91_RS11200	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
LQS91_RS11205	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
LQS91_RS11210	COG0183	Belongs to the thiolase family
LQS91_RS11215	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
LQS91_RS11225	COG1012	belongs to the aldehyde dehydrogenase family
LQS91_RS11235	COG3733	amine oxidase
LQS91_RS11245	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
LQS91_RS11255	COG1028	Short-chain dehydrogenase reductase Sdr
LQS91_RS11265	COG4638	Rieske (2fe-2S)
LQS91_RS11285	COG0154	amidase activity
LQS91_RS11300	COG2814	Major facilitator Superfamily
LQS91_RS11325	COG1960	acyl-CoA dehydrogenase activity
LQS91_RS11330	COG0583	DNA-binding transcription factor activity
LQS91_RS11335	COG1414	Transcriptional regulator
LQS91_RS11350	COG2391	methyltransferase activity
LQS91_RS11360	COG4993	Dehydrogenase
LQS91_RS11365	COG3659	wide pore channel activity
LQS91_RS11370	COG3420	alginic acid biosynthetic process
LQS91_RS11375	COG0710	3-dehydroquinate dehydratase activity
LQS91_RS11380	COG3485	protocatechuate 3,4-dioxygenase
LQS91_RS11385	COG3485	protocatechuate 3,4-dioxygenase
LQS91_RS11390	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
LQS91_RS11395	COG2271	Major facilitator Superfamily
LQS91_RS11400	COG0596	Alpha beta hydrolase
LQS91_RS11405	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
LQS91_RS11410	COG0183	Belongs to the thiolase family
LQS91_RS11415	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
LQS91_RS11420	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
LQS91_RS11430	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
LQS91_RS11435	COG2323	membrane
LQS91_RS11480	COG1902	pentaerythritol trinitrate reductase activity
LQS91_RS11480	COG0446	pyridine nucleotide-disulphide oxidoreductase
LQS91_RS11505	COG0542	response to heat
LQS91_RS11510	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
LQS91_RS11540	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
LQS91_RS11545	COG0569	domain protein
LQS91_RS11550	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
LQS91_RS11570	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LQS91_RS11580	COG1585	Membrane protein implicated in regulation of membrane protease activity
LQS91_RS11595	COG1294	oxidase, subunit
LQS91_RS11600	COG4890	Cyd operon protein YbgT
LQS91_RS11610	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
LQS91_RS11620	COG0552	protein localization to endoplasmic reticulum
LQS91_RS11645	COG0517	IMP dehydrogenase activity
LQS91_RS11645	COG0516	GMP reductase activity
LQS91_RS11650	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
LQS91_RS11655	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
LQS91_RS11665	COG0583	DNA-binding transcription factor activity
LQS91_RS11670	COG0024	Methionine aminopeptidase
LQS91_RS11700	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
LQS91_RS11700	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
LQS91_RS11705	COG1105	Belongs to the carbohydrate kinase PfkB family
LQS91_RS11710	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
LQS91_RS11710	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LQS91_RS11710	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LQS91_RS11730	COG5001	Diguanylate cyclase
LQS91_RS11730	COG3300	MHYT domain
LQS91_RS11745	COG2135	peptidase activity
LQS91_RS11750	COG0659	secondary active sulfate transmembrane transporter activity
LQS91_RS11770	COG1113	amino acid transport
LQS91_RS11780	COG1522	sequence-specific DNA binding
LQS91_RS11805	COG1011	Hydrolase
LQS91_RS11810	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
LQS91_RS11820	COG2137	regulation of response to DNA damage stimulus
LQS91_RS11835	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
LQS91_RS11870	COG0575	Belongs to the CDS family
LQS91_RS11875	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
LQS91_RS11900	COG3852	Histidine kinase
LQS91_RS11905	COG2204	response regulator
LQS91_RS11960	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
LQS91_RS11965	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
LQS91_RS11985	COG0697	spore germination
LQS91_RS12000	COG0303	'Molybdopterin
LQS91_RS12005	COG0315	cyclic pyranopterin monophosphate synthase activity
LQS91_RS12005	COG0521	Mo-molybdopterin cofactor biosynthetic process
LQS91_RS12020	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
LQS91_RS12025	COG0243	molybdopterin cofactor binding
LQS91_RS12035	COG0243	molybdopterin cofactor binding
LQS91_RS12040	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
LQS91_RS12045	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
LQS91_RS12045	COG2146	nitrite reductase [NAD(P)H] activity
LQS91_RS12055	COG0745	RESPONSE REGULATOR receiver
LQS91_RS12060	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
LQS91_RS12060	COG1116	anion transmembrane transporter activity
LQS91_RS12080	COG0511	ligase activity, forming carbon-carbon bonds
LQS91_RS12095	COG2814	Major facilitator Superfamily
LQS91_RS12115	COG0069	glutamate synthase activity
LQS91_RS12135	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
LQS91_RS12145	COG1454	alcohol dehydrogenase
LQS91_RS12150	COG0824	Thioesterase
LQS91_RS12160	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
LQS91_RS12175	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
LQS91_RS12180	COG2030	dehydratase
LQS91_RS12190	COG0183	Belongs to the thiolase family
LQS91_RS12200	COG0583	DNA-binding transcription factor activity
LQS91_RS12205	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
LQS91_RS12215	COG1522	sequence-specific DNA binding
LQS91_RS12220	COG3135	benzoate transporter
LQS91_RS12230	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
LQS91_RS12250	COG0589	response to stress
LQS91_RS12255	COG0488	(ABC) transporter
LQS91_RS12275	COG4773	Receptor
LQS91_RS12310	COG0668	transmembrane transport
LQS91_RS12320	COG1309	transcriptional regulator
LQS91_RS12335	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
LQS91_RS12350	COG1605	Chorismate mutase
LQS91_RS12390	COG2826	transposase and inactivated derivatives, IS30 family
LQS91_RS12395	COG0308	aminopeptidase N
LQS91_RS12420	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
LQS91_RS12425	COG1454	alcohol dehydrogenase
LQS91_RS12445	COG0531	amino acid
LQS91_RS12450	COG4303	Ethanolamine ammonia lyase large subunit
LQS91_RS12455	COG4302	ethanolamine ammonia-lyase activity
LQS91_RS12460	COG0519	Catalyzes the synthesis of GMP from XMP
LQS91_RS12460	COG0518	GMP synthase (glutamine-hydrolyzing) activity
LQS91_RS12465	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
LQS91_RS12490	COG0697	spore germination
LQS91_RS12495	COG1923	regulation of RNA biosynthetic process
LQS91_RS12505	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
LQS91_RS12510	COG0802	atpase or kinase
LQS91_RS12530	COG1187	pseudouridine synthase activity
LQS91_RS12545	COG0583	DNA-binding transcription factor activity
LQS91_RS12620	COG3409	Peptidoglycan-binding domain 1 protein
LQS91_RS12620	COG3267	Type II secretory pathway component ExeA
LQS91_RS12690	COG4373	Mu-like prophage FluMu protein gp28
LQS91_RS12700	COG4383	Mu-like prophage protein gp29
LQS91_RS12705	COG2369	cell adhesion
LQS91_RS12710	COG5005	Phage virion morphogenesis
LQS91_RS12725	COG4397	Mu-like prophage major head subunit gpT
LQS91_RS12820	COG2814	Major facilitator Superfamily
LQS91_RS12825	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
LQS91_RS12850	COG0729	surface antigen
LQS91_RS12870	COG0174	glutamine synthetase
LQS91_RS12875	COG0745	RESPONSE REGULATOR receiver
LQS91_RS12880	COG2205	protein histidine kinase activity
LQS91_RS12890	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
LQS91_RS12895	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
LQS91_RS12920	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
LQS91_RS12925	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
LQS91_RS12930	COG1960	acyl-CoA dehydrogenase activity
LQS91_RS12950	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
LQS91_RS12955	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
LQS91_RS12975	COG0583	DNA-binding transcription factor activity
LQS91_RS12990	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LQS91_RS13000	COG3658	cytochrome
LQS91_RS13005	COG1215	transferase activity, transferring glycosyl groups
LQS91_RS13010	COG0726	polysaccharide deacetylase
LQS91_RS13010	COG1649	PFAM Uncharacterised BCR, COG1649
LQS91_RS13035	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
LQS91_RS13040	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
LQS91_RS13050	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
LQS91_RS13075	COG0305	Participates in initiation and elongation during chromosome replication
LQS91_RS13080	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
LQS91_RS13090	COG1305	Transglutaminase-like
LQS91_RS13100	COG2308	Evidence 4 Homologs of previously reported genes of
LQS91_RS13130	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
LQS91_RS13135	COG0138	bifunctional purine biosynthesis protein purh
LQS91_RS13140	COG0151	Belongs to the GarS family
LQS91_RS13145	COG1464	Belongs to the NlpA lipoprotein family
LQS91_RS13150	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
LQS91_RS13155	COG2011	ABC-type metal ion transport system permease component
LQS91_RS13160	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LQS91_RS13170	COG1301	dicarboxylic acid transport
LQS91_RS13200	COG1794	racemase activity, acting on amino acids and derivatives
LQS91_RS13220	COG0745	RESPONSE REGULATOR receiver
LQS91_RS13225	COG0642	Histidine kinase
LQS91_RS13230	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
LQS91_RS13240	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
LQS91_RS13280	COG2351	hydroxyisourate hydrolase activity
LQS91_RS13290	COG3008	intermembrane lipid transfer
LQS91_RS13290	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
LQS91_RS13295	COG2995	paraquat-inducible protein a
LQS91_RS13320	COG0477	Major facilitator Superfamily
LQS91_RS13380	COG2186	Transcriptional regulator
LQS91_RS13395	COG1028	Short-chain dehydrogenase reductase Sdr
LQS91_RS13405	COG0583	DNA-binding transcription factor activity
LQS91_RS13415	COG0786	glutamate:sodium symporter activity
LQS91_RS13420	COG3243	poly(R)-hydroxyalkanoic acid synthase
LQS91_RS13445	COG3111	PFAM Bacterial OB fold (BOF) protein
LQS91_RS13545	COG1610	YqeY-like protein
LQS91_RS13550	COG4783	chaperone-mediated protein folding
LQS91_RS13575	COG1286	toxin biosynthetic process
LQS91_RS13605	COG0778	Nitroreductase
LQS91_RS13615	COG0513	Belongs to the DEAD box helicase family
LQS91_RS13640	COG2363	Small membrane protein
LQS91_RS13665	COG1234	tRNA 3'-trailer cleavage
LQS91_RS13670	COG2195	Cleaves the N-terminal amino acid of tripeptides
LQS91_RS13680	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
LQS91_RS13690	COG2819	hydrolase of the alpha beta superfamily
LQS91_RS13695	COG1960	acyl-CoA dehydrogenase activity
LQS91_RS13700	COG1301	dicarboxylic acid transport
LQS91_RS13705	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
LQS91_RS13710	COG3139	Protein of unknown function (DUF1315)
LQS91_RS13715	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
LQS91_RS13720	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
LQS91_RS13730	COG0494	nUDIX hydrolase
LQS91_RS13740	COG0642	Histidine kinase
LQS91_RS13755	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
LQS91_RS13765	COG1720	tRNA m6t6A37 methyltransferase activity
LQS91_RS13780	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LQS91_RS13785	COG0826	peptidase U32
LQS91_RS13790	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
LQS91_RS13800	COG4598	ABC transporter
LQS91_RS13805	COG4160	amino acid transport
LQS91_RS13810	COG4215	(ABC) transporter
LQS91_RS13825	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LQS91_RS13920	COG0739	heme binding
LQS91_RS14240	COG0582	viral genome integration into host DNA
LQS91_RS14245	COG1131	(ABC) transporter
LQS91_RS14250	COG0842	Transport permease protein
LQS91_RS14265	COG0772	Belongs to the SEDS family
LQS91_RS14270	COG2951	lytic endotransglycosylase activity
LQS91_RS14295	COG2207	Transcriptional regulator
LQS91_RS14310	COG0052	Belongs to the universal ribosomal protein uS2 family
LQS91_RS14315	COG0024	Methionine aminopeptidase
LQS91_RS14325	COG2223	nitrite transmembrane transporter activity
LQS91_RS14335	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LQS91_RS14340	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
LQS91_RS14345	COG1960	acyl-CoA dehydrogenase activity
LQS91_RS14360	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
LQS91_RS14365	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
LQS91_RS14370	COG1385	rRNA (uridine-N3-)-methyltransferase activity
LQS91_RS14390	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LQS91_RS14395	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
LQS91_RS14400	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
LQS91_RS14435	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
LQS91_RS14445	COG0174	glutamine synthetase
LQS91_RS14460	COG0512	Glutamine amidotransferase of anthranilate synthase
LQS91_RS14495	COG1529	Aldehyde oxidase and xanthine dehydrogenase
LQS91_RS14505	COG0302	gtp cyclohydrolase
LQS91_RS14530	COG3739	integral membrane protein
LQS91_RS14545	COG1169	isochorismate synthase
LQS91_RS14555	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
LQS91_RS14560	COG1132	(ABC) transporter
LQS91_RS14565	COG1132	(ABC) transporter
LQS91_RS14580	COG1535	isochorismatase
LQS91_RS14580	COG3433	isochorismatase activity
LQS91_RS14585	COG1021	2,3-dihydroxybenzoate-AMP ligase
LQS91_RS14590	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LQS91_RS14600	COG4774	siderophore transport
LQS91_RS14605	COG4607	ABC-type enterochelin transport system periplasmic component
LQS91_RS14610	COG4604	ABC transporter, ATP-binding protein
LQS91_RS14615	COG4605	iron ion homeostasis
LQS91_RS14620	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LQS91_RS14625	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LQS91_RS14640	COG2964	Protein conserved in bacteria
LQS91_RS14650	COG1741	Belongs to the pirin family
LQS91_RS14710	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LQS91_RS14710	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
LQS91_RS14715	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
LQS91_RS14725	COG1012	belongs to the aldehyde dehydrogenase family
LQS91_RS14735	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
LQS91_RS14740	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
LQS91_RS14745	COG0006	proline dipeptidase activity
LQS91_RS14750	COG0583	DNA-binding transcription factor activity
LQS91_RS14760	COG2879	small protein
LQS91_RS14765	COG1966	Carbon starvation protein
LQS91_RS14785	COG4943	cyclic-guanylate-specific phosphodiesterase activity
LQS91_RS14810	COG1067	ATP-dependent peptidase activity
LQS91_RS14815	COG0583	DNA-binding transcription factor activity
LQS91_RS14840	COG1686	Belongs to the peptidase S11 family
LQS91_RS14845	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
LQS91_RS14880	COG0616	signal peptide processing
LQS91_RS14885	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
LQS91_RS14895	COG0573	inorganic phosphate transmembrane transporter activity
LQS91_RS14900	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
LQS91_RS14905	COG1113	amino acid transport
LQS91_RS14910	COG3961	Belongs to the TPP enzyme family
LQS91_RS14915	COG1522	sequence-specific DNA binding
LQS91_RS14925	COG0076	glutamate decarboxylase activity
LQS91_RS14930	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
LQS91_RS14940	COG1309	transcriptional regulator
LQS91_RS14955	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
LQS91_RS14990	COG0352	thiamine-phosphate diphosphorylase activity
LQS91_RS15015	COG1203	CRISPR-associated helicase, Cas3
LQS91_RS15045	COG0612	Peptidase, M16
LQS91_RS15055	COG1823	symporter activity
LQS91_RS15060	COG0583	DNA-binding transcription factor activity
LQS91_RS15065	COG0477	Major facilitator Superfamily
LQS91_RS15085	COG1187	pseudouridine synthase activity
LQS91_RS15100	COG1686	Belongs to the peptidase S11 family
LQS91_RS15105	COG1252	NADH dehydrogenase
LQS91_RS15115	COG0415	Belongs to the DNA photolyase family
LQS91_RS15130	COG1215	transferase activity, transferring glycosyl groups
LQS91_RS15160	COG2070	2-Nitropropane dioxygenase
LQS91_RS15215	COG0556	nucleotide-excision repair
LQS91_RS15235	COG0436	Aminotransferase
LQS91_RS15265	COG4221	oxidoreductase activity
LQS91_RS15275	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
LQS91_RS15280	COG1381	Involved in DNA repair and RecF pathway recombination
LQS91_RS15290	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
LQS91_RS15305	COG0681	Belongs to the peptidase S26 family
LQS91_RS15320	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LQS91_RS15340	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
LQS91_RS15345	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
LQS91_RS15350	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
LQS91_RS15360	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
LQS91_RS15365	COG4208	sulfate ABC transporter
LQS91_RS15370	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
LQS91_RS15375	COG0583	DNA-binding transcription factor activity
LQS91_RS15380	COG4625	pathogenesis
LQS91_RS15395	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
LQS91_RS15410	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
LQS91_RS15420	COG1056	cytidyltransferase-related domain
LQS91_RS15420	COG1051	belongs to the nudix hydrolase family
LQS91_RS15425	COG1024	Enoyl-CoA hydratase
LQS91_RS15435	COG2814	Major facilitator Superfamily
LQS91_RS15440	COG0047	phosphoribosylformylglycinamidine synthase activity
LQS91_RS15440	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
LQS91_RS15460	COG1473	amidohydrolase
LQS91_RS15465	COG0824	Thioesterase
LQS91_RS15485	COG0823	Involved in the tonB-independent uptake of proteins
LQS91_RS15505	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LQS91_RS15540	COG0628	permease
LQS91_RS15550	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
LQS91_RS15555	COG0596	Alpha beta hydrolase
LQS91_RS15560	COG0616	signal peptide processing
LQS91_RS15560	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
LQS91_RS15570	COG0658	competence protein
LQS91_RS15570	COG2333	competence protein COMEC
LQS91_RS15575	COG1136	(ABC) transporter
LQS91_RS15580	COG4591	ABC-type transport system involved in lipoprotein release permease component
LQS91_RS15620	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LQS91_RS15640	COG0463	Glycosyl transferase, family 2
LQS91_RS15670	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
LQS91_RS15675	COG1280	lysine exporter protein (LysE YggA)
LQS91_RS15680	COG2267	carboxylic ester hydrolase activity
LQS91_RS15690	COG0019	diaminopimelate decarboxylase activity
LQS91_RS15700	COG1113	amino acid transport
LQS91_RS15715	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
LQS91_RS15725	COG3339	Conserved Protein
LQS91_RS15730	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
LQS91_RS15735	COG0243	molybdopterin cofactor binding
LQS91_RS15740	COG1929	Belongs to the glycerate kinase type-1 family
LQS91_RS15755	COG0778	Nitroreductase
LQS91_RS15790	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LQS91_RS15805	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
LQS91_RS15825	COG0741	lytic transglycosylase activity
LQS91_RS15845	COG0584	glycerophosphoryl diester phosphodiesterase
LQS91_RS15850	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LQS91_RS15875	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
LQS91_RS15880	COG1597	lipid kinase activity
LQS91_RS15895	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
LQS91_RS15900	COG0477	Major facilitator Superfamily
LQS91_RS15950	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
LQS91_RS15955	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
LQS91_RS15980	COG0505	Belongs to the CarA family
LQS91_RS16000	COG0589	response to stress
LQS91_RS16015	COG2843	Capsule synthesis protein
LQS91_RS16035	COG2321	neutral zinc metallopeptidase
LQS91_RS16040	COG2354	Protein conserved in bacteria
LQS91_RS16070	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LQS91_RS16095	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
LQS91_RS16100	COG1053	succinate dehydrogenase
LQS91_RS16105	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
LQS91_RS16110	COG2009	succinate dehydrogenase
LQS91_RS16145	COG2921	Belongs to the UPF0250 family
LQS91_RS16150	COG0321	lipoyl(octanoyl) transferase activity
LQS91_RS16165	COG0531	amino acid
LQS91_RS16175	COG1733	regulation of RNA biosynthetic process
LQS91_RS16180	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
LQS91_RS16185	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
LQS91_RS16185	COG1648	precorrin-2 dehydrogenase activity
LQS91_RS16200	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
LQS91_RS16230	COG0671	phosphoesterase, PA-phosphatase related
LQS91_RS16235	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LQS91_RS16245	COG1538	Outer membrane efflux protein
LQS91_RS16250	COG0393	Putative heavy-metal-binding
LQS91_RS16255	COG0393	Putative heavy-metal-binding
LQS91_RS16265	COG1028	Short-chain dehydrogenase reductase Sdr
LQS91_RS16275	COG0525	valine-tRNA ligase activity
LQS91_RS16295	COG0583	DNA-binding transcription factor activity
LQS91_RS16300	COG0004	ammonium transporteR
LQS91_RS16310	COG0642	Histidine kinase
LQS91_RS16315	COG0745	RESPONSE REGULATOR receiver
LQS91_RS16320	COG2194	sulfuric ester hydrolase activity
LQS91_RS16340	COG1752	Esterase of the alpha-beta hydrolase superfamily
LQS91_RS16355	COG2315	Protein conserved in bacteria
LQS91_RS16360	COG0142	geranyltranstransferase activity
LQS91_RS16365	COG2828	Protein conserved in bacteria
LQS91_RS16370	COG1113	amino acid transport
LQS91_RS16430	COG0739	heme binding
LQS91_RS16430	COG0741	lytic transglycosylase activity
LQS91_RS16430	COG1196	nuclear chromosome segregation
LQS91_RS16485	COG0740	serine-type endopeptidase activity
LQS91_RS16490	COG4695	Portal protein
LQS91_RS16495	COG1802	Transcriptional regulator
LQS91_RS16495	COG4626	Terminase
LQS91_RS16550	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
LQS91_RS16575	COG0305	Participates in initiation and elongation during chromosome replication
LQS91_RS16610	COG4197	protein conserved in bacteria, prophage-related
LQS91_RS16615	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
LQS91_RS16670	COG2207	Transcriptional regulator
LQS91_RS16695	COG2249	NAD(P)H dehydrogenase (quinone) activity
LQS91_RS16705	COG0560	Phosphoserine phosphatase
LQS91_RS16715	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LQS91_RS16725	COG1530	ribonuclease E activity
LQS91_RS16730	COG0424	maF-like protein
LQS91_RS16735	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
LQS91_RS16740	COG1792	Involved in formation and maintenance of cell shape
LQS91_RS16745	COG1077	Cell shape determining protein MreB Mrl
LQS91_RS16750	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
LQS91_RS16760	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
LQS91_RS16785	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
LQS91_RS16790	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
LQS91_RS16795	COG1752	Esterase of the alpha-beta hydrolase superfamily
LQS91_RS16800	COG1115	amino acid carrier protein
LQS91_RS16820	COG2814	Major facilitator Superfamily
LQS91_RS16825	COG1289	transmembrane transporter activity
LQS91_RS16835	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
LQS91_RS16875	COG1376	ErfK ybiS ycfS ynhG family protein
LQS91_RS16880	COG2832	Protein of unknown function (DUF454)
LQS91_RS16890	COG5510	response to toxic substance
LQS91_RS16905	COG0635	Involved in the biosynthesis of porphyrin-containing compound
LQS91_RS16920	COG0840	transmembrane signaling receptor activity
LQS91_RS16960	COG3422	double-strand break repair
LQS91_RS16965	COG2824	Alkylphosphonate utilization operon protein PhnA
LQS91_RS16970	COG3189	MarR family transcriptional regulator
LQS91_RS16980	COG0354	folic acid binding
LQS91_RS16985	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
LQS91_RS16995	COG0679	Auxin Efflux Carrier
LQS91_RS17000	COG1902	pentaerythritol trinitrate reductase activity
LQS91_RS17005	COG4772	TonB-dependent receptor
LQS91_RS17010	COG2094	Belongs to the DNA glycosylase MPG family
LQS91_RS17035	COG1217	gtp-binding protein TYPA
LQS91_RS17040	COG2233	PERMEase
LQS91_RS17050	COG0833	amino acid
LQS91_RS17055	COG1690	Belongs to the RtcB family
LQS91_RS17065	COG2885	chlorophyll binding
LQS91_RS17065	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
LQS91_RS17095	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
LQS91_RS17115	COG2207	Transcriptional regulator
LQS91_RS17120	COG0183	Belongs to the thiolase family
LQS91_RS17140	COG2153	protein acetylation
LQS91_RS17150	COG1272	protein, Hemolysin III
LQS91_RS17155	COG0477	Major facilitator Superfamily
LQS91_RS17170	COG0450	alkyl hydroperoxide reductase
LQS91_RS17190	COG0285	dihydrofolate synthase activity
LQS91_RS17240	COG2096	Adenosyltransferase
LQS91_RS17260	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
LQS91_RS17265	COG0745	RESPONSE REGULATOR receiver
LQS91_RS17270	COG2205	protein histidine kinase activity
LQS91_RS17280	COG1960	acyl-CoA dehydrogenase activity
LQS91_RS17285	COG1960	acyl-CoA dehydrogenase activity
LQS91_RS17350	COG0438	transferase activity, transferring glycosyl groups
LQS91_RS17355	COG0463	Glycosyl transferase, family 2
LQS91_RS17360	COG0726	polysaccharide deacetylase
LQS91_RS17380	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
LQS91_RS17385	COG2205	protein histidine kinase activity
LQS91_RS17415	COG1862	Preprotein translocase
LQS91_RS17430	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
LQS91_RS17440	COG3781	membrane
LQS91_RS17445	COG0613	PHP domain protein
LQS91_RS17455	COG2350	Protein conserved in bacteria
LQS91_RS17485	COG1607	acyl-coa hydrolase
LQS91_RS17545	COG2199	diguanylate cyclase activity
LQS91_RS17555	COG1408	metallophosphoesterase
LQS91_RS17560	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LQS91_RS17570	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
LQS91_RS17590	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
LQS91_RS17595	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
LQS91_RS17610	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
LQS91_RS17620	COG2969	positive regulation of protein catabolic process
LQS91_RS17640	COG1960	acyl-CoA dehydrogenase activity
LQS91_RS17645	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
LQS91_RS17660	COG1309	transcriptional regulator
LQS91_RS17665	COG1960	acyl-CoA dehydrogenase activity
LQS91_RS17710	COG1183	phosphatidylcholine synthase activity
LQS91_RS17715	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
LQS91_RS17745	COG0739	heme binding
LQS91_RS17745	COG0741	lytic transglycosylase activity
LQS91_RS17745	COG1196	nuclear chromosome segregation
LQS91_RS17755	COG1702	phosphate starvation-inducible protein PhoH
LQS91_RS17790	COG1295	ribonuclease BN
LQS91_RS17795	COG0697	spore germination
LQS91_RS17800	COG2169	Transcriptional regulator
LQS91_RS17805	COG0179	Fumarylacetoacetate (FAA) hydrolase
LQS91_RS17850	COG0557	exoribonuclease II activity
LQS91_RS17855	COG0339	signal peptide processing
LQS91_RS17860	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
LQS91_RS17890	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
LQS91_RS17895	COG1960	acyl-CoA dehydrogenase activity
LQS91_RS18050	COG0626	cystathionine gamma-synthase activity
LQS91_RS18055	COG0433	COG0433 Predicted ATPase
LQS91_RS18060	COG1017	nitric oxide dioxygenase activity
LQS91_RS18060	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
LQS91_RS18065	COG1959	2 iron, 2 sulfur cluster binding
LQS91_RS18080	COG1301	dicarboxylic acid transport
LQS91_RS18085	COG1946	Acyl-CoA thioesterase
LQS91_RS18105	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
LQS91_RS18110	COG1040	competence protein
LQS91_RS18115	COG0494	nUDIX hydrolase
LQS91_RS18125	COG0598	Magnesium transport protein CorA
LQS91_RS18135	COG2854	intermembrane phospholipid transfer
LQS91_RS18145	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
LQS91_RS18150	COG1127	ABC transporter
LQS91_RS18160	COG0513	Belongs to the DEAD box helicase family
LQS91_RS18180	COG0408	coproporphyrinogen oxidase activity
LQS91_RS18195	COG1960	acyl-CoA dehydrogenase activity
LQS91_RS18205	COG1983	PspC domain protein
LQS91_RS18210	COG0517	IMP dehydrogenase activity
LQS91_RS18260	COG0583	DNA-binding transcription factor activity
LQS91_RS18300	COG1012	belongs to the aldehyde dehydrogenase family
LQS91_RS18310	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
LQS91_RS18315	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
LQS91_RS18320	COG0833	amino acid
LQS91_RS18350	COG1192	Involved in chromosome partitioning
LQS91_RS18355	COG0628	permease
LQS91_RS18365	COG1289	transmembrane transporter activity
LQS91_RS18380	COG2249	NAD(P)H dehydrogenase (quinone) activity
LQS91_RS18385	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
LQS91_RS18395	COG0277	FAD linked oxidase domain protein
LQS91_RS18400	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
LQS91_RS18425	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
LQS91_RS18430	COG5380	lipid catabolic process
LQS91_RS18450	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
LQS91_RS18500	COG0194	GDP metabolic process
LQS91_RS18515	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
LQS91_RS18535	COG3307	-O-antigen
LQS91_RS18550	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
LQS91_RS18555	COG1704	LemA family
LQS91_RS18565	COG0493	'glutamate synthase
LQS91_RS18570	COG0069	glutamate synthase activity
LQS91_RS18570	COG0070	glutamate synthase
LQS91_RS18570	COG0067	glutamate synthase
LQS91_RS18620	COG2226	methyltransferase
LQS91_RS18635	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
LQS91_RS18640	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
LQS91_RS18685	COG0833	amino acid
LQS91_RS18750	COG0488	(ABC) transporter
LQS91_RS18755	COG2873	o-acetylhomoserine
LQS91_RS18760	COG4221	oxidoreductase activity
LQS91_RS18765	COG0659	secondary active sulfate transmembrane transporter activity
LQS91_RS18790	COG0427	acetyl-CoA hydrolase
LQS91_RS18820	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
LQS91_RS18860	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
LQS91_RS18920	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LQS91_RS18930	COG2249	NAD(P)H dehydrogenase (quinone) activity
LQS91_RS18935	COG1733	regulation of RNA biosynthetic process
LQS91_RS18950	COG1733	regulation of RNA biosynthetic process
LQS91_RS18970	COG0667	Aldo Keto reductase
LQS91_RS18990	COG0583	DNA-binding transcription factor activity
LQS91_RS18995	COG2814	Major facilitator Superfamily
LQS91_RS19025	COG1335	isochorismatase
LQS91_RS19035	COG1012	belongs to the aldehyde dehydrogenase family
LQS91_RS19040	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
LQS91_RS19050	COG1113	amino acid transport
LQS91_RS19060	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
LQS91_RS19075	COG2814	Major facilitator Superfamily
LQS91_RS19085	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
LQS91_RS19085	COG0352	thiamine-phosphate diphosphorylase activity
LQS91_RS19085	COG0351	phosphomethylpyrimidine kinase
LQS91_RS19105	COG1309	transcriptional regulator
LQS91_RS19110	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
LQS91_RS19125	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
LQS91_RS19135	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LQS91_RS19140	COG3162	membrane
LQS91_RS19145	COG2205	protein histidine kinase activity
LQS91_RS19145	COG2198	Histidine kinase
LQS91_RS19145	COG0784	Response regulator, receiver
LQS91_RS19170	COG1522	sequence-specific DNA binding
LQS91_RS19175	COG1335	isochorismatase
LQS91_RS19180	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
LQS91_RS19190	COG0668	transmembrane transport
LQS91_RS19195	COG1385	rRNA (uridine-N3-)-methyltransferase activity
LQS91_RS19200	COG1519	Transferase
LQS91_RS19205	COG1902	pentaerythritol trinitrate reductase activity
LQS91_RS19225	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
LQS91_RS19250	COG0426	domain, Protein
LQS91_RS19250	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
LQS91_RS19255	COG4774	siderophore transport
LQS91_RS19260	COG2119	membrane
LQS91_RS19270	COG0508	dehydrogenase complex catalyzes the overall conversion of
LQS91_RS19280	COG4942	peptidase
LQS91_RS19295	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
LQS91_RS19305	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
LQS91_RS19325	COG0189	ligase activity
LQS91_RS19345	COG0708	Exodeoxyribonuclease III
LQS91_RS19350	COG1393	Belongs to the ArsC family
LQS91_RS19365	COG3706	GGDEF domain
LQS91_RS19400	COG2351	hydroxyisourate hydrolase activity
LQS91_RS19405	COG2233	PERMEase
LQS91_RS19415	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LQS91_RS19425	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
LQS91_RS19435	COG3150	esterase
LQS91_RS19465	COG5632	N-Acetylmuramoyl-L-alanine amidase
LQS91_RS19465	COG3409	Peptidoglycan-binding domain 1 protein
LQS91_RS19465	COG1388	LysM domain
LQS91_RS19480	COG2918	glutathione biosynthetic process
LQS91_RS19495	COG2733	membrane
LQS91_RS19500	COG0436	Aminotransferase
LQS91_RS19505	COG0534	Mate efflux family protein
LQS91_RS19570	COG1061	Type III restriction enzyme res subunit
LQS91_RS19575	COG1002	Type II restriction enzyme, methylase subunits
LQS91_RS19620	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
LQS91_RS19625	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
LQS91_RS19635	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
LQS91_RS19740	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
LQS91_RS19785	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
LQS91_RS19815	COG0659	secondary active sulfate transmembrane transporter activity
LQS91_RS19820	COG0589	response to stress
LQS91_RS19860	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
LQS91_RS19875	COG0010	Belongs to the arginase family
LQS91_RS19905	COG2188	Transcriptional regulator
LQS91_RS19915	COG0523	cobalamin synthesis protein
LQS91_RS19925	COG1113	amino acid transport
LQS91_RS19935	COG0625	glutathione transferase activity
LQS91_RS19955	COG1683	Conserved Protein
LQS91_RS19960	COG0534	Mate efflux family protein
LQS91_RS19965	COG0385	Bile acid
LQS91_RS19970	COG1335	isochorismatase
LQS91_RS19975	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
LQS91_RS19995	COG2116	formate transmembrane transporter activity
LQS91_RS20000	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
LQS91_RS20005	COG2133	pyrroloquinoline quinone binding
LQS91_RS20010	COG2983	Belongs to the UPF0260 family
LQS91_RS20030	COG1194	a g-specific adenine glycosylase
LQS91_RS20045	COG2818	Glycosylase
LQS91_RS20050	COG1064	alcohol dehydrogenase
LQS91_RS20055	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LQS91_RS20070	COG0583	DNA-binding transcription factor activity
LQS91_RS20075	COG0656	L-ascorbic acid biosynthetic process
LQS91_RS20080	COG2814	Major facilitator Superfamily
LQS91_RS20115	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LQS91_RS20130	COG2233	PERMEase
LQS91_RS20135	COG0583	DNA-binding transcription factor activity
LQS91_RS20170	COG0733	neurotransmitter:sodium symporter activity