locus-tag class description FED54_RS00010 PF01476 LysM domain FED54_RS00010 PF01551 Peptidase family M23 FED54_RS00015 PF01975 Survival protein SurE FED54_RS00030 PF07943 Penicillin-binding protein 5, C-terminal domain FED54_RS00030 PF00768 D-alanyl-D-alanine carboxypeptidase FED54_RS00035 PF00132 Bacterial transferase hexapeptide (six repeats) FED54_RS00040 PF13344 Haloacid dehalogenase-like hydrolase FED54_RS00040 PF00293 NUDIX domain FED54_RS00050 PF04356 Protein of unknown function (DUF489) FED54_RS00055 PF00206 Lyase FED54_RS00055 PF08328 Adenylosuccinate lyase C-terminal FED54_RS00070 PF01343 Peptidase family S49 FED54_RS00070 PF08496 Peptidase family S49 N-terminal FED54_RS00075 PF00005 ABC transporter FED54_RS00080 PF00528 Binding-protein-dependent transport system inner membrane component FED54_RS00085 PF00528 Binding-protein-dependent transport system inner membrane component FED54_RS00090 PF12849 PBP superfamily domain FED54_RS00095 PF00324 Amino acid permease FED54_RS00100 PF00205 Thiamine pyrophosphate enzyme, central domain FED54_RS00100 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FED54_RS00100 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FED54_RS00105 PF01037 Lrp/AsnC ligand binding domain FED54_RS00110 PF00171 Aldehyde dehydrogenase family FED54_RS00115 PF00282 Pyridoxal-dependent decarboxylase conserved domain FED54_RS00120 PF00202 Aminotransferase class-III FED54_RS00130 PF17754 MftR C-terminal domain FED54_RS00130 PF00440 Bacterial regulatory proteins, tetR family FED54_RS00140 PF00487 Fatty acid desaturase FED54_RS00145 PF00970 Oxidoreductase FAD-binding domain FED54_RS00145 PF00111 2Fe-2S iron-sulfur cluster binding domain FED54_RS00145 PF00175 Oxidoreductase NAD-binding domain FED54_RS00150 PF00440 Bacterial regulatory proteins, tetR family FED54_RS00160 PF18337 RapA N-terminal Tudor like domain FED54_RS00160 PF00271 Helicase conserved C-terminal domain FED54_RS00160 PF00176 SNF2 family N-terminal domain FED54_RS00160 PF12137 RNA polymerase recycling family C-terminal FED54_RS00160 PF18339 RapA N-terminal Tudor like domain 1 FED54_RS00165 PF00849 RNA pseudouridylate synthase FED54_RS00175 PF00202 Aminotransferase class-III FED54_RS00180 PF02581 Thiamine monophosphate synthase FED54_RS00190 PF09615 CRISPR-associated protein (Cas_Csy3) FED54_RS00195 PF09614 CRISPR-associated protein (Cas_Csy2) FED54_RS00200 PF09611 CRISPR-associated protein (Cas_Csy1) FED54_RS00210 PF01867 CRISPR associated protein Cas1 FED54_RS00235 PF05193 Peptidase M16 inactive domain FED54_RS00235 PF00675 Insulinase (Peptidase family M16) FED54_RS00240 PF02567 Phenazine biosynthesis-like protein FED54_RS00245 PF00375 Sodium:dicarboxylate symporter family FED54_RS00250 PF03466 LysR substrate binding domain FED54_RS00250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_RS00255 PF06779 Uncharacterised MFS-type transporter YbfB FED54_RS00275 PF00180 Isocitrate/isopropylmalate dehydrogenase FED54_RS00280 PF00849 RNA pseudouridylate synthase FED54_RS00285 PF03971 Monomeric isocitrate dehydrogenase FED54_RS00295 PF07943 Penicillin-binding protein 5, C-terminal domain FED54_RS00295 PF00768 D-alanyl-D-alanine carboxypeptidase FED54_RS00300 PF07992 Pyridine nucleotide-disulphide oxidoreductase FED54_RS00305 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FED54_RS00310 PF00875 DNA photolyase FED54_RS00310 PF03441 FAD binding domain of DNA photolyase FED54_RS00340 PF02350 UDP-N-acetylglucosamine 2-epimerase FED54_RS00360 PF01207 Dihydrouridine synthase (Dus) FED54_RS00365 PF07759 Protein of unknown function (DUF1615) FED54_RS00375 PF01472 PUA domain FED54_RS00375 PF00696 Amino acid kinase family FED54_RS00380 PF01018 GTP1/OBG FED54_RS00380 PF01926 50S ribosome-binding GTPase FED54_RS00395 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FED54_RS00395 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FED54_RS00400 PF00892 EamA-like transporter family FED54_RS00410 PF17757 UvrB interaction domain FED54_RS00410 PF12344 Ultra-violet resistance protein B FED54_RS00410 PF02151 UvrB/uvrC motif FED54_RS00410 PF04851 Type III restriction enzyme, res subunit FED54_RS00410 PF00271 Helicase conserved C-terminal domain FED54_RS00420 PF00990 Diguanylate cyclase, GGDEF domain FED54_RS00420 PF17151 Periplasmic sensor domain FED54_RS00430 PF00155 Aminotransferase class I and II FED54_RS00460 PF00106 short chain dehydrogenase FED54_RS00465 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) FED54_RS00470 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ FED54_RS00475 PF02565 Recombination protein O C terminal FED54_RS00475 PF11967 Recombination protein O N terminal FED54_RS00485 PF07650 KH domain FED54_RS00485 PF01926 50S ribosome-binding GTPase FED54_RS00490 PF00035 Double-stranded RNA binding motif FED54_RS00490 PF14622 Ribonuclease-III-like FED54_RS00500 PF10502 Signal peptidase, peptidase S26 FED54_RS00505 PF06421 GTP-binding protein LepA C-terminus FED54_RS00505 PF03144 Elongation factor Tu domain 2 FED54_RS00505 PF00679 Elongation factor G C-terminus FED54_RS00505 PF00009 Elongation factor Tu GTP binding domain FED54_RS00515 PF13180 PDZ domain FED54_RS00520 PF02910 Fumarate reductase flavoprotein C-term FED54_RS00520 PF00890 FAD binding domain FED54_RS00530 PF02223 Thymidylate kinase FED54_RS00535 PF02618 YceG-like family FED54_RS00540 PF01063 Amino-transferase class IV FED54_RS00555 PF00528 Binding-protein-dependent transport system inner membrane component FED54_RS00560 PF00528 Binding-protein-dependent transport system inner membrane component FED54_RS00565 PF00005 ABC transporter FED54_RS00565 PF12857 TOBE-like domain FED54_RS00570 PF03466 LysR substrate binding domain FED54_RS00570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_RS00580 PF00132 Bacterial transferase hexapeptide (six repeats) FED54_RS00580 PF14602 Hexapeptide repeat of succinyl-transferase FED54_RS00580 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal FED54_RS00590 PF06508 Queuosine biosynthesis protein QueC FED54_RS00605 PF00578 AhpC/TSA family FED54_RS00615 PF01467 Cytidylyltransferase-like FED54_RS00615 PF00293 NUDIX domain FED54_RS00620 PF00378 Enoyl-CoA hydratase/isomerase FED54_RS00625 PF01784 NIF3 (NGG1p interacting factor 3) FED54_RS00630 PF07690 Major Facilitator Superfamily FED54_RS00635 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal FED54_RS00635 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FED54_RS00635 PF02769 AIR synthase related protein, C-terminal domain FED54_RS00640 PF01966 HD domain FED54_RS00645 PF01330 RuvA N terminal domain FED54_RS00645 PF07499 RuvA, C-terminal domain FED54_RS00650 PF05496 Holliday junction DNA helicase RuvB P-loop domain FED54_RS00650 PF05491 RuvB C-terminal winged helix domain FED54_RS00650 PF17864 RuvB AAA lid domain FED54_RS00655 PF07687 Peptidase dimerisation domain FED54_RS00655 PF01546 Peptidase family M20/M25/M40 FED54_RS00660 PF03061 Thioesterase superfamily FED54_RS00665 PF01618 MotA/TolQ/ExbB proton channel family FED54_RS00670 PF02472 Biopolymer transport protein ExbD/TolR FED54_RS00680 PF04052 TolB amino-terminal domain FED54_RS00680 PF07676 WD40-like Beta Propeller Repeat FED54_RS00685 PF00691 OmpA family FED54_RS00695 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain FED54_RS00700 PF08032 RNA 2'-O ribose methyltransferase substrate binding FED54_RS00700 PF00588 SpoU rRNA Methylase family FED54_RS00730 PF11638 DnaA N-terminal domain FED54_RS00730 PF08299 Bacterial dnaA protein helix-turn-helix FED54_RS00730 PF00308 Bacterial dnaA protein FED54_RS00735 PF01594 AI-2E family transporter FED54_RS00740 PF00586 AIR synthase related protein, N-terminal domain FED54_RS00740 PF02769 AIR synthase related protein, C-terminal domain FED54_RS00745 PF00551 Formyl transferase FED54_RS00750 PF12697 Alpha/beta hydrolase family FED54_RS00755 PF06965 Na+/H+ antiporter 1 FED54_RS00755 PF01343 Peptidase family S49 FED54_RS00765 PF00753 Metallo-beta-lactamase superfamily FED54_RS00765 PF13567 Domain of unknown function (DUF4131) FED54_RS00765 PF03772 Competence protein FED54_RS00770 PF00005 ABC transporter FED54_RS00775 PF12704 MacB-like periplasmic core domain FED54_RS00775 PF02687 FtsX-like permease family FED54_RS00785 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 FED54_RS00795 PF00266 Aminotransferase class-V FED54_RS00805 PF13533 Biotin-lipoyl like FED54_RS00825 PF00535 Glycosyl transferase family 2 FED54_RS00855 PF03989 DNA gyrase C-terminal domain, beta-propeller FED54_RS00855 PF00521 DNA gyrase/topoisomerase IV, subunit A FED54_RS00860 PF00766 Electron transfer flavoprotein FAD-binding domain FED54_RS00860 PF01012 Electron transfer flavoprotein domain FED54_RS00865 PF01012 Electron transfer flavoprotein domain FED54_RS00870 PF00589 Phage integrase family FED54_RS00870 PF02899 Phage integrase, N-terminal SAM-like domain FED54_RS00875 PF01810 LysE type translocator FED54_RS00880 PF01678 Diaminopimelate epimerase FED54_RS00885 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FED54_RS00885 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FED54_RS00895 PF00324 Amino acid permease FED54_RS00900 PF18073 Rubredoxin metal binding domain FED54_RS00910 PF00152 tRNA synthetases class II (D, K and N) FED54_RS00915 PF11890 Domain of unknown function (DUF3410) FED54_RS00915 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FED54_RS00915 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FED54_RS00920 PF06803 Protein of unknown function (DUF1232) FED54_RS00925 PF02634 FdhD/NarQ family FED54_RS00930 PF00384 Molybdopterin oxidoreductase FED54_RS00935 PF02595 Glycerate kinase family FED54_RS00950 PF00881 Nitroreductase family FED54_RS00985 PF09857 Putative toxin of bacterial toxin-antitoxin pair FED54_RS01010 PF03449 Transcription elongation factor, N-terminal FED54_RS01010 PF01272 Transcription elongation factor, GreA/GreB, C-term FED54_RS01015 PF01464 Transglycosylase SLT domain FED54_RS01015 PF00497 Bacterial extracellular solute-binding proteins, family 3 FED54_RS01025 PF01171 PP-loop family FED54_RS01035 PF01464 Transglycosylase SLT domain FED54_RS01040 PF01435 Peptidase family M48 FED54_RS01050 PF00873 AcrB/AcrD/AcrF family FED54_RS01055 PF03009 Glycerophosphoryl diester phosphodiesterase family FED54_RS01065 PF01219 Prokaryotic diacylglycerol kinase FED54_RS01070 PF00118 TCP-1/cpn60 chaperonin family FED54_RS01075 PF00166 Chaperonin 10 Kd subunit FED54_RS01080 PF00149 Calcineurin-like phosphoesterase FED54_RS01085 PF00781 Diacylglycerol kinase catalytic domain FED54_RS01090 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain FED54_RS01090 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain FED54_RS01095 PF01266 FAD dependent oxidoreductase FED54_RS01095 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FED54_RS01100 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FED54_RS01100 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FED54_RS01105 PF00083 Sugar (and other) transporter FED54_RS01120 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FED54_RS01120 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FED54_RS01135 PF16655 PhoD-like phosphatase, N-terminal domain FED54_RS01135 PF09423 PhoD-like phosphatase FED54_RS01155 PF00809 Pterin binding enzyme FED54_RS01160 PF01434 Peptidase family M41 FED54_RS01160 PF06480 FtsH Extracellular FED54_RS01160 PF00004 ATPase family associated with various cellular activities (AAA) FED54_RS01160 PF17862 AAA+ lid domain FED54_RS01165 PF01728 FtsJ-like methyltransferase FED54_RS01170 PF01985 CRS1 / YhbY (CRM) domain FED54_RS01185 PF00117 Glutamine amidotransferase class-I FED54_RS01185 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FED54_RS01190 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FED54_RS01190 PF02142 MGS-like domain FED54_RS01190 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FED54_RS01195 PF03449 Transcription elongation factor, N-terminal FED54_RS01195 PF01272 Transcription elongation factor, GreA/GreB, C-term FED54_RS01200 PF00132 Bacterial transferase hexapeptide (six repeats) FED54_RS01205 PF00582 Universal stress protein family FED54_RS01210 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FED54_RS01220 PF09587 Bacterial capsule synthesis protein PGA_cap FED54_RS01235 PF00999 Sodium/hydrogen exchanger family FED54_RS01240 PF04228 Putative neutral zinc metallopeptidase FED54_RS01245 PF05661 Protein of unknown function (DUF808) FED54_RS01250 PF00579 tRNA synthetases class I (W and Y) FED54_RS01255 PF00549 CoA-ligase FED54_RS01255 PF02629 CoA binding domain FED54_RS01260 PF08442 ATP-grasp domain FED54_RS01260 PF00549 CoA-ligase FED54_RS01265 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FED54_RS01265 PF07992 Pyridine nucleotide-disulphide oxidoreductase FED54_RS01270 PF02817 e3 binding domain FED54_RS01270 PF00364 Biotin-requiring enzyme FED54_RS01270 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FED54_RS01275 PF16078 2-oxoglutarate dehydrogenase N-terminus FED54_RS01275 PF00676 Dehydrogenase E1 component FED54_RS01275 PF16870 2-oxoglutarate dehydrogenase C-terminal FED54_RS01275 PF02779 Transketolase, pyrimidine binding domain FED54_RS01290 PF13085 2Fe-2S iron-sulfur cluster binding domain FED54_RS01295 PF02910 Fumarate reductase flavoprotein C-term FED54_RS01295 PF00890 FAD binding domain FED54_RS01300 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FED54_RS01305 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FED54_RS01310 PF00285 Citrate synthase, C-terminal domain FED54_RS01320 PF17773 UPF0176 acylphosphatase like domain FED54_RS01320 PF00581 Rhodanese-like domain FED54_RS01335 PF04545 Sigma-70, region 4 FED54_RS01335 PF04539 Sigma-70 region 3 FED54_RS01335 PF04542 Sigma-70 region 2 FED54_RS01335 PF00140 Sigma-70 factor, region 1.2 FED54_RS01335 PF04546 Sigma-70, non-essential region FED54_RS01335 PF03979 Sigma-70 factor, region 1.1 FED54_RS01340 PF04359 Protein of unknown function (DUF493) FED54_RS01345 PF03099 Biotin/lipoate A/B protein ligase family FED54_RS01355 PF00465 Iron-containing alcohol dehydrogenase FED54_RS01360 PF13520 Amino acid permease FED54_RS01365 PF03358 NADPH-dependent FMN reductase FED54_RS01370 PF01638 HxlR-like helix-turn-helix FED54_RS01375 PF00588 SpoU rRNA Methylase family FED54_RS01380 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FED54_RS01380 PF14824 Sirohaem biosynthesis protein central FED54_RS01380 PF10414 Sirohaem synthase dimerisation region FED54_RS01385 PF02403 Seryl-tRNA synthetase N-terminal domain FED54_RS01385 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FED54_RS01395 PF03548 Outer membrane lipoprotein carrier protein LolA FED54_RS01400 PF01016 Ribosomal L27 protein FED54_RS01405 PF00829 Ribosomal prokaryotic L21 protein FED54_RS01415 PF00348 Polyprenyl synthetase FED54_RS01425 PF01569 PAP2 superfamily FED54_RS01430 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FED54_RS01430 PF00529 HlyD membrane-fusion protein of T1SS FED54_RS01435 PF00873 AcrB/AcrD/AcrF family FED54_RS01440 PF02321 Outer membrane efflux protein FED54_RS01445 PF01906 Putative heavy-metal-binding FED54_RS01450 PF01906 Putative heavy-metal-binding FED54_RS01470 PF08264 Anticodon-binding domain of tRNA FED54_RS01470 PF00133 tRNA synthetases class I (I, L, M and V) FED54_RS01470 PF10458 Valyl tRNA synthetase tRNA binding arm FED54_RS01490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_RS01490 PF03466 LysR substrate binding domain FED54_RS01500 PF00909 Ammonium Transporter Family FED54_RS01510 PF00512 His Kinase A (phospho-acceptor) domain FED54_RS01510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED54_RS01510 PF08521 Two-component sensor kinase N-terminal FED54_RS01515 PF00486 Transcriptional regulatory protein, C terminal FED54_RS01515 PF00072 Response regulator receiver domain FED54_RS01520 PF08019 Phosphoethanolamine transferase EptA/EptB FED54_RS01520 PF00884 Sulfatase FED54_RS01540 PF01734 Patatin-like phospholipase FED54_RS01550 PF01145 SPFH domain / Band 7 family FED54_RS01555 PF04237 YjbR FED54_RS01560 PF00348 Polyprenyl synthetase FED54_RS01565 PF04303 PrpF protein FED54_RS01570 PF00324 Amino acid permease FED54_RS01580 PF01965 DJ-1/PfpI family FED54_RS01585 PF08990 Erythronolide synthase docking FED54_RS01585 PF16197 Ketoacyl-synthetase C-terminal extension FED54_RS01585 PF02801 Beta-ketoacyl synthase, C-terminal domain FED54_RS01585 PF08659 KR domain FED54_RS01585 PF00109 Beta-ketoacyl synthase, N-terminal domain FED54_RS01585 PF00550 Phosphopantetheine attachment site FED54_RS01585 PF14765 Polyketide synthase dehydratase FED54_RS01585 PF08240 Alcohol dehydrogenase GroES-like domain FED54_RS01585 PF09277 Erythronolide synthase, docking FED54_RS01585 PF00698 Acyl transferase domain FED54_RS01590 PF06719 AraC-type transcriptional regulator N-terminus FED54_RS01590 PF12833 Helix-turn-helix domain FED54_RS01595 PF02673 Bacitracin resistance protein BacA FED54_RS01615 PF02525 Flavodoxin-like fold FED54_RS01630 PF01507 Phosphoadenosine phosphosulfate reductase family FED54_RS01635 PF06974 Protein of unknown function (DUF1298) FED54_RS01635 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain FED54_RS01645 PF10150 Ribonuclease E/G family FED54_RS01645 PF00575 S1 RNA binding domain FED54_RS01650 PF02545 Maf-like protein FED54_RS01655 PF04093 rod shape-determining protein MreD FED54_RS01660 PF04085 rod shape-determining protein MreC FED54_RS01670 PF02686 Glu-tRNAGln amidotransferase C subunit FED54_RS01675 PF01425 Amidase FED54_RS01680 PF02637 GatB domain FED54_RS01680 PF02934 GatB/GatE catalytic domain FED54_RS01705 PF05649 Peptidase family M13 FED54_RS01705 PF01431 Peptidase family M13 FED54_RS01710 PF05992 SbmA/BacA-like family FED54_RS01715 PF13291 ACT domain FED54_RS01715 PF00291 Pyridoxal-phosphate dependent enzyme FED54_RS01720 PF01734 Patatin-like phospholipase FED54_RS01725 PF01235 Sodium:alanine symporter family FED54_RS01740 PF00881 Nitroreductase family FED54_RS01745 PF07690 Major Facilitator Superfamily FED54_RS01750 PF12805 FUSC-like inner membrane protein yccS FED54_RS01760 PF00667 FAD binding domain FED54_RS01760 PF00258 Flavodoxin FED54_RS01760 PF00175 Oxidoreductase NAD-binding domain FED54_RS01800 PF03734 L,D-transpeptidase catalytic domain FED54_RS01800 PF17969 L,D-transpeptidase C-terminal domain FED54_RS01805 PF04304 Protein of unknown function (DUF454) FED54_RS01815 PF08085 Entericidin EcnA/B family FED54_RS01820 PF01546 Peptidase family M20/M25/M40 FED54_RS01820 PF07687 Peptidase dimerisation domain FED54_RS01830 PF00072 Response regulator receiver domain FED54_RS01830 PF01584 CheW-like domain FED54_RS01830 PF01627 Hpt domain FED54_RS01830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED54_RS01845 PF00072 Response regulator receiver domain FED54_RS01850 PF00072 Response regulator receiver domain FED54_RS01865 PF00873 AcrB/AcrD/AcrF family FED54_RS01870 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FED54_RS01870 PF03129 Anticodon binding domain FED54_RS01870 PF04073 Aminoacyl-tRNA editing domain FED54_RS01875 PF07411 Domain of unknown function (DUF1508) FED54_RS01880 PF08274 PhnA Zinc-Ribbon FED54_RS01880 PF03831 PhnA domain FED54_RS01895 PF01571 Aminomethyltransferase folate-binding domain FED54_RS01900 PF13098 Thioredoxin-like domain FED54_RS01900 PF10411 Disulfide bond isomerase protein N-terminus FED54_RS01910 PF03547 Membrane transport protein FED54_RS01915 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FED54_RS01920 PF00593 TonB dependent receptor FED54_RS01920 PF07715 TonB-dependent Receptor Plug Domain FED54_RS01925 PF02245 Methylpurine-DNA glycosylase (MPG) FED54_RS01930 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FED54_RS01930 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FED54_RS01930 PF06827 Zinc finger found in FPG and IleRS FED54_RS01945 PF01741 Large-conductance mechanosensitive channel, MscL FED54_RS01950 PF03144 Elongation factor Tu domain 2 FED54_RS01950 PF00009 Elongation factor Tu GTP binding domain FED54_RS01950 PF00679 Elongation factor G C-terminus FED54_RS01955 PF00860 Permease family FED54_RS01960 PF05175 Methyltransferase small domain FED54_RS01960 PF08468 Methyltransferase small domain N-terminal FED54_RS01965 PF00324 Amino acid permease FED54_RS01970 PF01139 tRNA-splicing ligase RtcB FED54_RS01975 PF13505 Outer membrane protein beta-barrel domain FED54_RS01975 PF00691 OmpA family FED54_RS01985 PF02803 Thiolase, C-terminal domain FED54_RS01985 PF00108 Thiolase, N-terminal domain FED54_RS01995 PF00893 Small Multidrug Resistance protein FED54_RS02005 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FED54_RS02005 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FED54_RS02010 PF01011 PQQ enzyme repeat FED54_RS02015 PF04966 Carbohydrate-selective porin, OprB family FED54_RS02020 PF02515 CoA-transferase family III FED54_RS02025 PF12833 Helix-turn-helix domain FED54_RS02025 PF02311 AraC-like ligand binding domain FED54_RS02030 PF00108 Thiolase, N-terminal domain FED54_RS02030 PF02803 Thiolase, C-terminal domain FED54_RS02035 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FED54_RS02035 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FED54_RS02035 PF00378 Enoyl-CoA hydratase/isomerase FED54_RS02060 PF03006 Haemolysin-III related FED54_RS02065 PF07690 Major Facilitator Superfamily FED54_RS02065 PF00083 Sugar (and other) transporter FED54_RS02075 PF07516 SecA Wing and Scaffold domain FED54_RS02075 PF01043 SecA preprotein cross-linking domain FED54_RS02075 PF02810 SEC-C motif FED54_RS02075 PF07517 SecA DEAD-like domain FED54_RS02080 PF10417 C-terminal domain of 1-Cys peroxiredoxin FED54_RS02080 PF00578 AhpC/TSA family FED54_RS02085 PF00753 Metallo-beta-lactamase superfamily FED54_RS02100 PF08245 Mur ligase middle domain FED54_RS02100 PF02875 Mur ligase family, glutamate ligase domain FED54_RS02105 PF01039 Carboxyl transferase domain FED54_RS02110 PF00290 Tryptophan synthase alpha chain FED54_RS02135 PF00291 Pyridoxal-phosphate dependent enzyme FED54_RS02140 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FED54_RS02145 PF00593 TonB dependent receptor FED54_RS02145 PF07715 TonB-dependent Receptor Plug Domain FED54_RS02150 PF01923 Cobalamin adenosyltransferase FED54_RS02155 PF03009 Glycerophosphoryl diester phosphodiesterase family FED54_RS02170 PF02696 Uncharacterized ACR, YdiU/UPF0061 family FED54_RS02175 PF00486 Transcriptional regulatory protein, C terminal FED54_RS02175 PF00072 Response regulator receiver domain FED54_RS02180 PF00672 HAMP domain FED54_RS02180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED54_RS02180 PF00512 His Kinase A (phospho-acceptor) domain FED54_RS02190 PF12806 Acetyl-CoA dehydrogenase C-terminal like FED54_RS02190 PF02770 Acyl-CoA dehydrogenase, middle domain FED54_RS02190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FED54_RS02190 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FED54_RS02195 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FED54_RS02195 PF02770 Acyl-CoA dehydrogenase, middle domain FED54_RS02195 PF12806 Acetyl-CoA dehydrogenase C-terminal like FED54_RS02195 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FED54_RS02200 PF06146 Phosphate-starvation-inducible E FED54_RS02225 PF07715 TonB-dependent Receptor Plug Domain FED54_RS02225 PF00593 TonB dependent receptor FED54_RS02235 PF02938 GAD domain FED54_RS02235 PF00152 tRNA synthetases class II (D, K and N) FED54_RS02235 PF01336 OB-fold nucleic acid binding domain FED54_RS02250 PF01501 Glycosyl transferase family 8 FED54_RS02250 PF08437 Glycosyl transferase family 8 C-terminal FED54_RS02255 PF09612 Bacterial protein of unknown function (HtrL_YibB) FED54_RS02265 PF13439 Glycosyltransferase Family 4 FED54_RS02265 PF00534 Glycosyl transferases group 1 FED54_RS02275 PF00534 Glycosyl transferases group 1 FED54_RS02275 PF13439 Glycosyltransferase Family 4 FED54_RS02280 PF01522 Polysaccharide deacetylase FED54_RS02290 PF01063 Amino-transferase class IV FED54_RS02295 PF03710 Glutamate-ammonia ligase adenylyltransferase FED54_RS02295 PF08335 GlnD PII-uridylyltransferase FED54_RS02300 PF07689 KaiB domain FED54_RS02300 PF00512 His Kinase A (phospho-acceptor) domain FED54_RS02300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED54_RS02310 PF02547 Queuosine biosynthesis protein FED54_RS02325 PF01702 Queuine tRNA-ribosyltransferase FED54_RS02330 PF02699 Preprotein translocase subunit FED54_RS02335 PF07549 SecD/SecF GG Motif FED54_RS02335 PF13721 SecD export protein N-terminal TM region FED54_RS02335 PF02355 Protein export membrane protein FED54_RS02340 PF02355 Protein export membrane protein FED54_RS02340 PF07549 SecD/SecF GG Motif FED54_RS02345 PF02441 Flavoprotein FED54_RS02345 PF04127 DNA / pantothenate metabolism flavoprotein FED54_RS02350 PF04002 RadC-like JAB domain FED54_RS02355 PF01062 Bestrophin, RFP-TM, chloride channel FED54_RS02360 PF02811 PHP domain FED54_RS02365 PF04279 Intracellular septation protein A FED54_RS02370 PF03795 YCII-related domain FED54_RS02380 PF01266 FAD dependent oxidoreductase FED54_RS02380 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FED54_RS02390 PF04461 Protein of unknown function (DUF520) FED54_RS02400 PF03061 Thioesterase superfamily FED54_RS02405 PF00085 Thioredoxin FED54_RS02410 PF00561 alpha/beta hydrolase fold FED54_RS02415 PF04273 Putative phosphatase (DUF442) FED54_RS02415 PF00753 Metallo-beta-lactamase superfamily FED54_RS02425 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FED54_RS02425 PF07992 Pyridine nucleotide-disulphide oxidoreductase FED54_RS02460 PF00990 Diguanylate cyclase, GGDEF domain FED54_RS02460 PF17152 Periplasmic sensor domain FED54_RS02465 PF01389 OmpA-like transmembrane domain FED54_RS02465 PF00691 OmpA family FED54_RS02470 PF10518 TAT (twin-arginine translocation) pathway signal sequence FED54_RS02470 PF00149 Calcineurin-like phosphoesterase FED54_RS02475 PF13091 PLD-like domain FED54_RS02485 PF01926 50S ribosome-binding GTPase FED54_RS02485 PF13167 GTP-binding GTPase N-terminal FED54_RS02485 PF16360 GTP-binding GTPase Middle Region FED54_RS02505 PF00149 Calcineurin-like phosphoesterase FED54_RS02510 PF00398 Ribosomal RNA adenine dimethylase FED54_RS02515 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FED54_RS02520 PF00572 Ribosomal protein L13 FED54_RS02525 PF00380 Ribosomal protein S9/S16 FED54_RS02530 PF00043 Glutathione S-transferase, C-terminal domain FED54_RS02530 PF13417 Glutathione S-transferase, N-terminal domain FED54_RS02535 PF04386 Stringent starvation protein B FED54_RS02545 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FED54_RS02545 PF02785 Biotin carboxylase C-terminal domain FED54_RS02545 PF00289 Biotin carboxylase, N-terminal domain FED54_RS02545 PF00364 Biotin-requiring enzyme FED54_RS02555 PF02770 Acyl-CoA dehydrogenase, middle domain FED54_RS02555 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FED54_RS02555 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FED54_RS02560 PF01039 Carboxyl transferase domain FED54_RS02575 PF00440 Bacterial regulatory proteins, tetR family FED54_RS02575 PF17932 Tetracyclin repressor-like, C-terminal domain FED54_RS02625 PF01066 CDP-alcohol phosphatidyltransferase FED54_RS02630 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ FED54_RS02650 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FED54_RS02650 PF00056 lactate/malate dehydrogenase, NAD binding domain FED54_RS02660 PF01551 Peptidase family M23 FED54_RS02660 PF01464 Transglycosylase SLT domain FED54_RS02660 PF10145 Phage-related minor tail protein FED54_RS02665 PF04055 Radical SAM superfamily FED54_RS02665 PF01938 TRAM domain FED54_RS02665 PF00919 Uncharacterized protein family UPF0004 FED54_RS02670 PF02562 PhoH-like protein FED54_RS02675 PF02130 Uncharacterized protein family UPF0054 FED54_RS02700 PF03358 NADPH-dependent FMN reductase FED54_RS02705 PF03631 Virulence factor BrkB FED54_RS02710 PF00892 EamA-like transporter family FED54_RS02715 PF12833 Helix-turn-helix domain FED54_RS02720 PF01557 Fumarylacetoacetate (FAA) hydrolase family FED54_RS02765 PF17876 Cold shock domain FED54_RS02765 PF00773 RNB domain FED54_RS02765 PF00575 S1 RNA binding domain FED54_RS02765 PF08461 Ribonuclease R winged-helix domain FED54_RS02765 PF08206 Ribonuclease B OB domain FED54_RS02770 PF01432 Peptidase family M3 FED54_RS02775 PF09526 Probable metal-binding protein (DUF2387) FED54_RS02805 PF03937 Flavinator of succinate dehydrogenase FED54_RS02810 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FED54_RS02810 PF02770 Acyl-CoA dehydrogenase, middle domain FED54_RS02810 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FED54_RS02815 PF00743 Flavin-binding monooxygenase-like FED54_RS02820 PF01196 Ribosomal protein L17 FED54_RS02825 PF01000 RNA polymerase Rpb3/RpoA insert domain FED54_RS02825 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FED54_RS02825 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FED54_RS02830 PF01479 S4 domain FED54_RS02830 PF00163 Ribosomal protein S4/S9 N-terminal domain FED54_RS02835 PF00411 Ribosomal protein S11 FED54_RS02840 PF00416 Ribosomal protein S13/S18 FED54_RS02845 PF00444 Ribosomal protein L36 FED54_RS02850 PF00344 SecY translocase FED54_RS02855 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FED54_RS02860 PF00327 Ribosomal protein L30p/L7e FED54_RS02865 PF03719 Ribosomal protein S5, C-terminal domain FED54_RS02865 PF00333 Ribosomal protein S5, N-terminal domain FED54_RS02870 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FED54_RS02875 PF00347 Ribosomal protein L6 FED54_RS02880 PF00410 Ribosomal protein S8 FED54_RS02885 PF00253 Ribosomal protein S14p/S29e FED54_RS02890 PF00281 Ribosomal protein L5 FED54_RS02890 PF00673 ribosomal L5P family C-terminus FED54_RS02895 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FED54_RS02895 PF00467 KOW motif FED54_RS02900 PF00238 Ribosomal protein L14p/L23e FED54_RS02905 PF00366 Ribosomal protein S17 FED54_RS02910 PF00831 Ribosomal L29 protein FED54_RS02915 PF00252 Ribosomal protein L16p/L10e FED54_RS02920 PF07650 KH domain FED54_RS02920 PF00189 Ribosomal protein S3, C-terminal domain FED54_RS02925 PF00237 Ribosomal protein L22p/L17e FED54_RS02930 PF00203 Ribosomal protein S19 FED54_RS02935 PF00181 Ribosomal Proteins L2, RNA binding domain FED54_RS02935 PF03947 Ribosomal Proteins L2, C-terminal domain FED54_RS02940 PF00276 Ribosomal protein L23 FED54_RS02945 PF00573 Ribosomal protein L4/L1 family FED54_RS02950 PF00297 Ribosomal protein L3 FED54_RS02955 PF00338 Ribosomal protein S10p/S20e FED54_RS02960 PF00117 Glutamine amidotransferase class-I FED54_RS02965 PF01053 Cys/Met metabolism PLP-dependent enzyme FED54_RS02970 PF05872 Bacterial protein of unknown function (DUF853) FED54_RS02980 PF00970 Oxidoreductase FAD-binding domain FED54_RS02980 PF00042 Globin FED54_RS02980 PF00175 Oxidoreductase NAD-binding domain FED54_RS02985 PF02082 Transcriptional regulator FED54_RS02990 PF01926 50S ribosome-binding GTPase FED54_RS03000 PF00375 Sodium:dicarboxylate symporter family FED54_RS03010 PF01553 Acyltransferase FED54_RS03025 PF00270 DEAD/DEAH box helicase FED54_RS03025 PF17191 RecG wedge domain FED54_RS03025 PF00271 Helicase conserved C-terminal domain FED54_RS03030 PF00156 Phosphoribosyl transferase domain FED54_RS03035 PF00293 NUDIX domain FED54_RS03040 PF03641 Possible lysine decarboxylase FED54_RS03045 PF01544 CorA-like Mg2+ transporter protein FED54_RS03055 PF05494 MlaC protein FED54_RS03065 PF02405 Permease MlaE FED54_RS03070 PF00005 ABC transporter FED54_RS03075 PF03880 DbpA RNA binding domain FED54_RS03075 PF12343 Cold shock protein DEAD box A FED54_RS03075 PF00271 Helicase conserved C-terminal domain FED54_RS03075 PF00270 DEAD/DEAH box helicase FED54_RS03080 PF00459 Inositol monophosphatase family FED54_RS03085 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FED54_RS03085 PF02779 Transketolase, pyrimidine binding domain FED54_RS03085 PF02780 Transketolase, C-terminal domain FED54_RS03090 PF00925 GTP cyclohydrolase II FED54_RS03095 PF01218 Coproporphyrinogen III oxidase FED54_RS03100 PF08501 Shikimate dehydrogenase substrate binding domain FED54_RS03100 PF01488 Shikimate / quinate 5-dehydrogenase FED54_RS03100 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FED54_RS03110 PF12806 Acetyl-CoA dehydrogenase C-terminal like FED54_RS03110 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FED54_RS03110 PF02770 Acyl-CoA dehydrogenase, middle domain FED54_RS03110 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FED54_RS03120 PF04024 PspC domain FED54_RS03125 PF00571 CBS domain FED54_RS03150 PF02091 Glycyl-tRNA synthetase alpha subunit FED54_RS03155 PF05746 DALR anticodon binding domain FED54_RS03155 PF02092 Glycyl-tRNA synthetase beta subunit FED54_RS03160 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system FED54_RS03175 PF00892 EamA-like transporter family FED54_RS03180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_RS03180 PF03466 LysR substrate binding domain FED54_RS03195 PF00082 Subtilase family FED54_RS03195 PF05922 Peptidase inhibitor I9 FED54_RS03210 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family FED54_RS03215 PF04996 Succinylarginine dihydrolase FED54_RS03220 PF00171 Aldehyde dehydrogenase family FED54_RS03225 PF04958 Arginine N-succinyltransferase beta subunit FED54_RS03230 PF00202 Aminotransferase class-III FED54_RS03235 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FED54_RS03235 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FED54_RS03240 PF00324 Amino acid permease FED54_RS03250 PF08241 Methyltransferase domain FED54_RS03270 PF13614 AAA domain FED54_RS03280 PF00080 Copper/zinc superoxide dismutase (SODC) FED54_RS03285 PF12805 FUSC-like inner membrane protein yccS FED54_RS03290 PF07690 Major Facilitator Superfamily FED54_RS03300 PF02525 Flavodoxin-like fold FED54_RS03305 PF03992 Antibiotic biosynthesis monooxygenase FED54_RS03315 PF01565 FAD binding domain FED54_RS03315 PF02913 FAD linked oxidases, C-terminal domain FED54_RS03320 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FED54_RS03320 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FED54_RS03325 PF00892 EamA-like transporter family FED54_RS03330 PF00892 EamA-like transporter family FED54_RS03340 PF01925 Sulfite exporter TauE/SafE FED54_RS03345 PF09157 Pseudouridine synthase II TruB, C-terminal FED54_RS03345 PF01509 TruB family pseudouridylate synthase (N terminal domain) FED54_RS03345 PF16198 tRNA pseudouridylate synthase B C-terminal domain FED54_RS03355 PF00561 alpha/beta hydrolase fold FED54_RS03360 PF01245 Ribosomal protein L19 FED54_RS03365 PF01746 tRNA (Guanine-1)-methyltransferase FED54_RS03370 PF05239 PRC-barrel domain FED54_RS03370 PF01782 RimM N-terminal domain FED54_RS03375 PF00886 Ribosomal protein S16 FED54_RS03415 PF02401 LytB protein FED54_RS03420 PF00625 Guanylate kinase FED54_RS03425 PF01192 RNA polymerase Rpb6 FED54_RS03435 PF04607 Region found in RelA / SpoT proteins FED54_RS03435 PF13291 ACT domain FED54_RS03435 PF02824 TGS domain FED54_RS03440 PF01042 Endoribonuclease L-PSP FED54_RS03445 PF04324 BFD-like [2Fe-2S] binding domain FED54_RS03450 PF00210 Ferritin-like domain FED54_RS03455 PF04932 O-Antigen ligase FED54_RS03455 PF11846 Virulence factor membrane-bound polymerase, C-terminal FED54_RS03455 PF15864 Protein glycosylation ligase FED54_RS03460 PF07963 Prokaryotic N-terminal methylation motif FED54_RS03460 PF00114 Pilin (bacterial filament) FED54_RS03470 PF04536 TPM domain FED54_RS03475 PF04011 LemA family FED54_RS03485 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FED54_RS03485 PF07992 Pyridine nucleotide-disulphide oxidoreductase FED54_RS03490 PF01645 Conserved region in glutamate synthase FED54_RS03490 PF04898 Glutamate synthase central domain FED54_RS03490 PF00310 Glutamine amidotransferases class-II FED54_RS03490 PF01493 GXGXG motif FED54_RS03500 PF01761 3-dehydroquinate synthase FED54_RS03505 PF01202 Shikimate kinase FED54_RS03510 PF07660 Secretin and TonB N terminus short domain FED54_RS03510 PF00263 Bacterial type II and III secretion system protein FED54_RS03510 PF11741 AMIN domain FED54_RS03510 PF03958 Bacterial type II/III secretion system short domain FED54_RS03520 PF04350 Pilus assembly protein, PilO FED54_RS03525 PF05137 Fimbrial assembly protein (PilN) FED54_RS03530 PF11104 Type IV pilus assembly protein PilM; FED54_RS03535 PF00905 Penicillin binding protein transpeptidase domain FED54_RS03535 PF17092 Penicillin-binding protein OB-like domain FED54_RS03535 PF00912 Transglycosylase FED54_RS03540 PF13847 Methyltransferase domain FED54_RS03550 PF00953 Glycosyl transferase family 4 FED54_RS03555 PF08245 Mur ligase middle domain FED54_RS03555 PF01225 Mur ligase family, catalytic domain FED54_RS03555 PF02875 Mur ligase family, glutamate ligase domain FED54_RS03560 PF01225 Mur ligase family, catalytic domain FED54_RS03560 PF02875 Mur ligase family, glutamate ligase domain FED54_RS03560 PF08245 Mur ligase middle domain FED54_RS03565 PF03717 Penicillin-binding Protein dimerisation domain FED54_RS03565 PF00905 Penicillin binding protein transpeptidase domain FED54_RS03575 PF01795 MraW methylase family FED54_RS03590 PF00749 tRNA synthetases class I (E and Q), catalytic domain FED54_RS03605 PF00324 Amino acid permease FED54_RS03635 PF01545 Cation efflux family FED54_RS03640 PF00873 AcrB/AcrD/AcrF family FED54_RS03645 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FED54_RS03645 PF00529 HlyD membrane-fusion protein of T1SS FED54_RS03665 PF04191 Phospholipid methyltransferase FED54_RS03690 PF12848 ABC transporter FED54_RS03690 PF00005 ABC transporter FED54_RS03700 PF00106 short chain dehydrogenase FED54_RS03705 PF01740 STAS domain FED54_RS03705 PF00916 Sulfate permease family FED54_RS03710 PF16921 Tex protein YqgF-like domain FED54_RS03710 PF09371 Tex-like protein N-terminal domain FED54_RS03710 PF00575 S1 RNA binding domain FED54_RS03710 PF17674 HHH domain FED54_RS03715 PF00486 Transcriptional regulatory protein, C terminal FED54_RS03715 PF00072 Response regulator receiver domain FED54_RS03720 PF00512 His Kinase A (phospho-acceptor) domain FED54_RS03720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED54_RS03720 PF00672 HAMP domain FED54_RS03730 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain FED54_RS03730 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain FED54_RS03735 PF00583 Acetyltransferase (GNAT) family FED54_RS03755 PF00475 Imidazoleglycerol-phosphate dehydratase FED54_RS03760 PF00117 Glutamine amidotransferase class-I FED54_RS03775 PF00977 Histidine biosynthesis protein FED54_RS03780 PF00005 ABC transporter FED54_RS03780 PF00664 ABC transporter transmembrane region FED54_RS03795 PF03992 Antibiotic biosynthesis monooxygenase FED54_RS03810 PF01636 Phosphotransferase enzyme family FED54_RS03815 PF00977 Histidine biosynthesis protein FED54_RS03830 PF00230 Major intrinsic protein FED54_RS03855 PF02705 K+ potassium transporter FED54_RS03890 PF02525 Flavodoxin-like fold FED54_RS03900 PF01638 HxlR-like helix-turn-helix FED54_RS03930 PF01638 HxlR-like helix-turn-helix FED54_RS03955 PF12833 Helix-turn-helix domain FED54_RS03955 PF02311 AraC-like ligand binding domain FED54_RS03960 PF00248 Aldo/keto reductase family FED54_RS03980 PF03466 LysR substrate binding domain FED54_RS03980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_RS03985 PF07690 Major Facilitator Superfamily FED54_RS04005 PF01593 Flavin containing amine oxidoreductase FED54_RS04010 PF02678 Pirin FED54_RS04010 PF05726 Pirin C-terminal cupin domain FED54_RS04015 PF00857 Isochorismatase family FED54_RS04020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_RS04025 PF00171 Aldehyde dehydrogenase family FED54_RS04030 PF00202 Aminotransferase class-III FED54_RS04035 PF00392 Bacterial regulatory proteins, gntR family FED54_RS04035 PF00155 Aminotransferase class I and II FED54_RS04040 PF00324 Amino acid permease FED54_RS04050 PF03591 AzlC protein FED54_RS04060 PF00436 Single-strand binding protein family FED54_RS04065 PF07690 Major Facilitator Superfamily FED54_RS04075 PF02581 Thiamine monophosphate synthase FED54_RS04075 PF03070 TENA/THI-4/PQQC family FED54_RS04075 PF08543 Phosphomethylpyrimidine kinase FED54_RS04080 PF06942 GlpM protein FED54_RS04090 PF08240 Alcohol dehydrogenase GroES-like domain FED54_RS04090 PF00107 Zinc-binding dehydrogenase FED54_RS04095 PF00440 Bacterial regulatory proteins, tetR family FED54_RS04095 PF16925 Tetracyclin repressor-like, C-terminal domain FED54_RS04100 PF17760 UvrA interaction domain FED54_RS04100 PF17755 UvrA DNA-binding domain FED54_RS04105 PF00990 Diguanylate cyclase, GGDEF domain FED54_RS04115 PF02028 BCCT, betaine/carnitine/choline family transporter FED54_RS04125 PF00474 Sodium:solute symporter family FED54_RS04130 PF04341 Protein of unknown function, DUF485 FED54_RS04135 PF01627 Hpt domain FED54_RS04135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED54_RS04135 PF00512 His Kinase A (phospho-acceptor) domain FED54_RS04135 PF00072 Response regulator receiver domain FED54_RS04135 PF00672 HAMP domain FED54_RS04145 PF00072 Response regulator receiver domain FED54_RS04145 PF00196 Bacterial regulatory proteins, luxR family FED54_RS04150 PF03358 NADPH-dependent FMN reductase FED54_RS04155 PF00296 Luciferase-like monooxygenase FED54_RS04160 PF01037 Lrp/AsnC ligand binding domain FED54_RS04165 PF00857 Isochorismatase family FED54_RS04170 PF16177 Acetyl-coenzyme A synthetase N-terminus FED54_RS04170 PF00501 AMP-binding enzyme FED54_RS04170 PF13193 AMP-binding enzyme C-terminal domain FED54_RS04180 PF00924 Mechanosensitive ion channel FED54_RS04185 PF04452 RNA methyltransferase FED54_RS04190 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) FED54_RS04195 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FED54_RS04220 PF02272 DHHA1 domain FED54_RS04220 PF01368 DHH family FED54_RS04220 PF17768 RecJ OB domain FED54_RS04225 PF01243 Pyridoxamine 5'-phosphate oxidase FED54_RS04225 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region FED54_RS04230 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FED54_RS04230 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FED54_RS04230 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FED54_RS04230 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FED54_RS04235 PF00478 IMP dehydrogenase / GMP reductase domain FED54_RS04235 PF00571 CBS domain FED54_RS04240 PF03692 Putative zinc- or iron-chelating domain FED54_RS04245 PF00258 Flavodoxin FED54_RS04245 PF01613 Flavin reductase like domain FED54_RS04250 PF00593 TonB dependent receptor FED54_RS04250 PF07715 TonB-dependent Receptor Plug Domain FED54_RS04255 PF01169 Uncharacterized protein family UPF0016 FED54_RS04265 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FED54_RS04265 PF02817 e3 binding domain FED54_RS04265 PF00364 Biotin-requiring enzyme FED54_RS04270 PF17831 Pyruvate dehydrogenase E1 component middle domain FED54_RS04270 PF00456 Transketolase, thiamine diphosphate binding domain FED54_RS04275 PF01551 Peptidase family M23 FED54_RS04285 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase FED54_RS04290 PF00091 Tubulin/FtsZ family, GTPase domain FED54_RS04290 PF12327 FtsZ family, C-terminal domain FED54_RS04295 PF02491 SHS2 domain inserted in FTSA FED54_RS04300 PF03799 Cell division protein FtsQ FED54_RS04300 PF08478 POTRA domain, FtsQ-type FED54_RS04305 PF01820 D-ala D-ala ligase N-terminus FED54_RS04305 PF07478 D-ala D-ala ligase C-terminus FED54_RS04310 PF08245 Mur ligase middle domain FED54_RS04310 PF01225 Mur ligase family, catalytic domain FED54_RS04310 PF02875 Mur ligase family, glutamate ligase domain FED54_RS04315 PF03033 Glycosyltransferase family 28 N-terminal domain FED54_RS04315 PF04101 Glycosyltransferase family 28 C-terminal domain FED54_RS04320 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FED54_RS04320 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FED54_RS04335 PF07715 TonB-dependent Receptor Plug Domain FED54_RS04335 PF00593 TonB dependent receptor FED54_RS04345 PF00156 Phosphoribosyl transferase domain FED54_RS04350 PF03372 Endonuclease/Exonuclease/phosphatase family FED54_RS04355 PF03960 ArsC family FED54_RS04365 PF07859 alpha/beta hydrolase fold FED54_RS04370 PF07694 5TMR of 5TMR-LYT FED54_RS04370 PF00990 Diguanylate cyclase, GGDEF domain FED54_RS04375 PF11412 Disulphide bond corrector protein DsbC FED54_RS04375 PF02683 Cytochrome C biogenesis protein transmembrane region FED54_RS04405 PF00576 HIUase/Transthyretin family FED54_RS04410 PF00860 Permease family FED54_RS04420 PF01494 FAD binding domain FED54_RS04425 PF03561 Allantoicase repeat FED54_RS04430 PF04115 Ureidoglycolate lyase FED54_RS04435 PF00106 short chain dehydrogenase FED54_RS04440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED54_RS04440 PF00986 DNA gyrase B subunit, carboxyl terminus FED54_RS04440 PF00204 DNA gyrase B FED54_RS04440 PF01751 Toprim domain FED54_RS04445 PF05728 Uncharacterised protein family (UPF0227) FED54_RS04495 PF01510 N-acetylmuramoyl-L-alanine amidase FED54_RS04495 PF01476 LysM domain FED54_RS04495 PF01471 Putative peptidoglycan binding domain FED54_RS04500 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) FED54_RS04500 PF04717 Type VI secretion system, phage-baseplate injector FED54_RS04500 PF13296 Putative type VI secretion system Rhs element Vgr FED54_RS04505 PF02600 Disulfide bond formation protein DsbB FED54_RS04510 PF04262 Glutamate-cysteine ligase FED54_RS04525 PF04286 Protein of unknown function (DUF445) FED54_RS04530 PF00155 Aminotransferase class I and II FED54_RS04535 PF01554 MatE FED54_RS04540 PF00106 short chain dehydrogenase FED54_RS04550 PF00486 Transcriptional regulatory protein, C terminal FED54_RS04550 PF00072 Response regulator receiver domain FED54_RS04555 PF11808 Phosphate regulon sensor protein PhoR FED54_RS04555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED54_RS04555 PF00989 PAS fold FED54_RS04555 PF00512 His Kinase A (phospho-acceptor) domain FED54_RS04565 PF02666 Phosphatidylserine decarboxylase FED54_RS04570 PF00581 Rhodanese-like domain FED54_RS04575 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FED54_RS04575 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain FED54_RS04610 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FED54_RS04610 PF00925 GTP cyclohydrolase II FED54_RS04615 PF00885 6,7-dimethyl-8-ribityllumazine synthase FED54_RS04620 PF01029 NusB family FED54_RS04625 PF00586 AIR synthase related protein, N-terminal domain FED54_RS04625 PF02769 AIR synthase related protein, C-terminal domain FED54_RS04630 PF04608 Phosphatidylglycerophosphatase A FED54_RS04635 PF14602 Hexapeptide repeat of succinyl-transferase FED54_RS04635 PF12804 MobA-like NTP transferase domain FED54_RS04635 PF00132 Bacterial transferase hexapeptide (six repeats) FED54_RS04640 PF01380 SIS domain FED54_RS04645 PF08721 TnsA endonuclease C terminal FED54_RS04645 PF08722 TnsA endonuclease N terminal FED54_RS04650 PF00665 Integrase core domain FED54_RS04655 PF11426 Tn7 transposition regulator TnsC FED54_RS04655 PF13401 AAA domain FED54_RS04660 PF06527 TniQ FED54_RS04660 PF15978 Tn7-like transposition protein D FED54_RS04685 PF00873 AcrB/AcrD/AcrF family FED54_RS04690 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FED54_RS04740 PF01177 Asp/Glu/Hydantoin racemase FED54_RS04745 PF13419 Haloacid dehalogenase-like hydrolase FED54_RS04755 PF00491 Arginase family FED54_RS04760 PF01979 Amidohydrolase family FED54_RS04765 PF00324 Amino acid permease FED54_RS04770 PF00221 Aromatic amino acid lyase FED54_RS04775 PF01175 Urocanase Rossmann-like domain FED54_RS04775 PF17391 Urocanase N-terminal domain FED54_RS04775 PF17392 Urocanase C-terminal domain FED54_RS04780 PF05962 HutD FED54_RS04795 PF02492 CobW/HypB/UreG, nucleotide-binding domain FED54_RS04795 PF07683 Cobalamin synthesis protein cobW C-terminal domain FED54_RS04805 PF00324 Amino acid permease FED54_RS04815 PF02798 Glutathione S-transferase, N-terminal domain FED54_RS04815 PF14497 Glutathione S-transferase, C-terminal domain FED54_RS04820 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FED54_RS04830 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FED54_RS04835 PF04463 Protein of unknown function (DUF523) FED54_RS04840 PF01554 MatE FED54_RS04845 PF01758 Sodium Bile acid symporter family FED54_RS04850 PF00857 Isochorismatase family FED54_RS04855 PF00701 Dihydrodipicolinate synthetase family FED54_RS04865 PF01259 SAICAR synthetase FED54_RS04875 PF01226 Formate/nitrite transporter FED54_RS04880 PF12002 MgsA AAA+ ATPase C terminal FED54_RS04880 PF00004 ATPase family associated with various cellular activities (AAA) FED54_RS04880 PF16193 AAA C-terminal domain FED54_RS04885 PF07995 Glucose / Sorbosone dehydrogenase FED54_RS04890 PF03692 Putative zinc- or iron-chelating domain FED54_RS04895 PF07043 Protein of unknown function (DUF1328) FED54_RS04910 PF00633 Helix-hairpin-helix motif FED54_RS04910 PF14815 NUDIX domain FED54_RS04910 PF00730 HhH-GPD superfamily base excision DNA repair protein FED54_RS04910 PF10576 Iron-sulfur binding domain of endonuclease III FED54_RS04925 PF03352 Methyladenine glycosylase FED54_RS04930 PF08240 Alcohol dehydrogenase GroES-like domain FED54_RS04930 PF00107 Zinc-binding dehydrogenase FED54_RS04935 PF00155 Aminotransferase class I and II FED54_RS04935 PF00392 Bacterial regulatory proteins, gntR family FED54_RS04950 PF03466 LysR substrate binding domain FED54_RS04950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_RS04955 PF00248 Aldo/keto reductase family FED54_RS04960 PF07690 Major Facilitator Superfamily FED54_RS04970 PF05173 Dihydrodipicolinate reductase, C-terminus FED54_RS04970 PF01113 Dihydrodipicolinate reductase, N-terminus FED54_RS04980 PF00226 DnaJ domain FED54_RS04980 PF01556 DnaJ C terminal domain FED54_RS04980 PF00684 DnaJ central domain FED54_RS04990 PF00873 AcrB/AcrD/AcrF family FED54_RS04995 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FED54_RS05000 PF00440 Bacterial regulatory proteins, tetR family FED54_RS05000 PF08361 MAATS-type transcriptional repressor, C-terminal region FED54_RS05005 PF00311 Phosphoenolpyruvate carboxylase FED54_RS05010 PF00860 Permease family FED54_RS05015 PF03466 LysR substrate binding domain FED54_RS05015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_RS05030 PF00920 Dehydratase family FED54_RS05035 PF02911 Formyl transferase, C-terminal domain FED54_RS05035 PF00551 Formyl transferase FED54_RS05040 PF01029 NusB family FED54_RS05040 PF01189 16S rRNA methyltransferase RsmB/F FED54_RS05050 PF00209 Sodium:neurotransmitter symporter family FED54_RS05090 PF00579 tRNA synthetases class I (W and Y) FED54_RS05095 PF03702 Anhydro-N-acetylmuramic acid kinase FED54_RS05100 PF00561 alpha/beta hydrolase fold FED54_RS05105 PF01521 Iron-sulphur cluster biosynthesis FED54_RS05125 PF00005 ABC transporter FED54_RS05125 PF12848 ABC transporter FED54_RS05130 PF09335 SNARE associated Golgi protein FED54_RS05140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED54_RS05140 PF00204 DNA gyrase B FED54_RS05140 PF18053 DNA gyrase B subunit insert domain FED54_RS05140 PF00986 DNA gyrase B subunit, carboxyl terminus FED54_RS05140 PF01751 Toprim domain FED54_RS05145 PF02463 RecF/RecN/SMC N terminal domain FED54_RS05150 PF02767 DNA polymerase III beta subunit, central domain FED54_RS05150 PF02768 DNA polymerase III beta subunit, C-terminal domain FED54_RS05150 PF00712 DNA polymerase III beta subunit, N-terminal domain FED54_RS05155 PF11638 DnaA N-terminal domain FED54_RS05155 PF00308 Bacterial dnaA protein FED54_RS05155 PF08299 Bacterial dnaA protein helix-turn-helix FED54_RS05160 PF00468 Ribosomal protein L34 FED54_RS05165 PF00825 Ribonuclease P FED54_RS05170 PF01809 Putative membrane protein insertion efficiency factor FED54_RS05175 PF14849 YidC periplasmic domain FED54_RS05175 PF02096 60Kd inner membrane protein FED54_RS05180 PF10396 GTP-binding protein TrmE N-terminus FED54_RS05180 PF01926 50S ribosome-binding GTPase FED54_RS05180 PF12631 MnmE helical domain FED54_RS05185 PF02583 Metal-sensitive transcriptional repressor FED54_RS05190 PF01545 Cation efflux family FED54_RS05190 PF16916 Dimerisation domain of Zinc Transporter FED54_RS05195 PF13098 Thioredoxin-like domain FED54_RS05195 PF10411 Disulfide bond isomerase protein N-terminus FED54_RS05205 PF00156 Phosphoribosyl transferase domain FED54_RS05210 PF01979 Amidohydrolase family FED54_RS05215 PF00355 Rieske [2Fe-2S] domain FED54_RS05220 PF03738 Glutathionylspermidine synthase preATP-grasp FED54_RS05230 PF03741 Integral membrane protein TerC family FED54_RS05235 PF01569 PAP2 superfamily FED54_RS05245 PF08245 Mur ligase middle domain FED54_RS05245 PF01225 Mur ligase family, catalytic domain FED54_RS05245 PF02875 Mur ligase family, glutamate ligase domain FED54_RS05260 PF00731 AIR carboxylase FED54_RS05265 PF02222 ATP-grasp domain FED54_RS05265 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain FED54_RS05270 PF13406 Transglycosylase SLT domain FED54_RS05290 PF00012 Hsp70 protein FED54_RS05295 PF01025 GrpE FED54_RS05320 PF07859 alpha/beta hydrolase fold FED54_RS05325 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FED54_RS05365 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FED54_RS05370 PF01252 Signal peptidase (SPase) II FED54_RS05375 PF00133 tRNA synthetases class I (I, L, M and V) FED54_RS05375 PF08264 Anticodon-binding domain of tRNA FED54_RS05375 PF06827 Zinc finger found in FPG and IleRS FED54_RS05380 PF06574 FAD synthetase FED54_RS05380 PF01687 Riboflavin kinase FED54_RS05390 PF01048 Phosphorylase superfamily FED54_RS05395 PF08362 YcdC-like protein, C-terminal region FED54_RS05395 PF00440 Bacterial regulatory proteins, tetR family FED54_RS05400 PF00005 ABC transporter FED54_RS05405 PF00528 Binding-protein-dependent transport system inner membrane component FED54_RS05410 PF00296 Luciferase-like monooxygenase FED54_RS05415 PF09084 NMT1/THI5 like FED54_RS05420 PF09084 NMT1/THI5 like FED54_RS05425 PF00696 Amino acid kinase family FED54_RS05425 PF00583 Acetyltransferase (GNAT) family FED54_RS05440 PF00106 short chain dehydrogenase FED54_RS05445 PF13419 Haloacid dehalogenase-like hydrolase FED54_RS05455 PF01323 DSBA-like thioredoxin domain FED54_RS05460 PF08360 QacR-like protein, C-terminal region FED54_RS05460 PF00440 Bacterial regulatory proteins, tetR family FED54_RS05465 PF00440 Bacterial regulatory proteins, tetR family FED54_RS05470 PF00175 Oxidoreductase NAD-binding domain FED54_RS05475 PF00487 Fatty acid desaturase FED54_RS05480 PF01138 3' exoribonuclease family, domain 1 FED54_RS05480 PF03725 3' exoribonuclease family, domain 2 FED54_RS05485 PF04185 Phosphoesterase family FED54_RS05485 PF05506 Domain of unknown function (DUF756) FED54_RS05495 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FED54_RS05495 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FED54_RS05500 PF01510 N-acetylmuramoyl-L-alanine amidase FED54_RS05505 PF03023 Lipid II flippase MurJ FED54_RS05510 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FED54_RS05510 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FED54_RS05515 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FED54_RS05515 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FED54_RS05520 PF13807 G-rich domain on putative tyrosine kinase FED54_RS05520 PF02706 Chain length determinant protein FED54_RS05520 PF13614 AAA domain FED54_RS05525 PF01451 Low molecular weight phosphotyrosine protein phosphatase FED54_RS05530 PF02563 Polysaccharide biosynthesis/export protein FED54_RS05530 PF18412 Outer-membrane lipoprotein Wza C-terminal domain FED54_RS05530 PF10531 SLBB domain FED54_RS05535 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FED54_RS05535 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FED54_RS05535 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FED54_RS05540 PF02719 Polysaccharide biosynthesis protein FED54_RS05545 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FED54_RS05550 PF02350 UDP-N-acetylglucosamine 2-epimerase FED54_RS05555 PF08666 SAF domain FED54_RS05555 PF03102 NeuB family FED54_RS05565 PF00483 Nucleotidyl transferase FED54_RS05570 PF02348 Cytidylyltransferase FED54_RS05615 PF01370 NAD dependent epimerase/dehydratase family FED54_RS05620 PF02350 UDP-N-acetylglucosamine 2-epimerase FED54_RS05625 PF13579 Glycosyl transferase 4-like domain FED54_RS05630 PF01370 NAD dependent epimerase/dehydratase family FED54_RS05635 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 FED54_RS05635 PF00953 Glycosyl transferase family 4 FED54_RS05645 PF02719 Polysaccharide biosynthesis protein FED54_RS05650 PF00483 Nucleotidyl transferase FED54_RS05655 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FED54_RS05655 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FED54_RS05655 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FED54_RS05660 PF00342 Phosphoglucose isomerase FED54_RS05665 PF16363 GDP-mannose 4,6 dehydratase FED54_RS05670 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FED54_RS05670 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FED54_RS05670 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FED54_RS05670 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FED54_RS05675 PF02652 L-lactate permease FED54_RS05680 PF07729 FCD domain FED54_RS05680 PF00392 Bacterial regulatory proteins, gntR family FED54_RS05685 PF01070 FMN-dependent dehydrogenase FED54_RS05690 PF09330 D-lactate dehydrogenase, membrane binding FED54_RS05690 PF01565 FAD binding domain FED54_RS05695 PF00155 Aminotransferase class I and II FED54_RS05700 PF07729 FCD domain FED54_RS05700 PF00392 Bacterial regulatory proteins, gntR family FED54_RS05710 PF00285 Citrate synthase, C-terminal domain FED54_RS05715 PF00694 Aconitase C-terminal domain FED54_RS05715 PF00330 Aconitase family (aconitate hydratase) FED54_RS05755 PF02801 Beta-ketoacyl synthase, C-terminal domain FED54_RS05755 PF00109 Beta-ketoacyl synthase, N-terminal domain FED54_RS05765 PF13296 Putative type VI secretion system Rhs element Vgr FED54_RS05765 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) FED54_RS05765 PF04717 Type VI secretion system, phage-baseplate injector FED54_RS05810 PF00849 RNA pseudouridylate synthase FED54_RS05825 PF00593 TonB dependent receptor FED54_RS05825 PF07715 TonB-dependent Receptor Plug Domain FED54_RS05835 PF01037 Lrp/AsnC ligand binding domain FED54_RS05840 PF01266 FAD dependent oxidoreductase FED54_RS05845 PF00842 Alanine racemase, C-terminal domain FED54_RS05845 PF01168 Alanine racemase, N-terminal domain FED54_RS05850 PF01042 Endoribonuclease L-PSP FED54_RS05855 PF00324 Amino acid permease FED54_RS05860 PF00324 Amino acid permease FED54_RS05870 PF00171 Aldehyde dehydrogenase family FED54_RS05875 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FED54_RS05875 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FED54_RS05880 PF13193 AMP-binding enzyme C-terminal domain FED54_RS05880 PF00501 AMP-binding enzyme FED54_RS05885 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FED54_RS05885 PF02770 Acyl-CoA dehydrogenase, middle domain FED54_RS05885 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FED54_RS05890 PF00378 Enoyl-CoA hydratase/isomerase FED54_RS05895 PF00378 Enoyl-CoA hydratase/isomerase FED54_RS05900 PF00083 Sugar (and other) transporter FED54_RS05900 PF07690 Major Facilitator Superfamily FED54_RS05905 PF00765 Autoinducer synthase FED54_RS05915 PF00196 Bacterial regulatory proteins, luxR family FED54_RS05915 PF03472 Autoinducer binding domain FED54_RS05920 PF00501 AMP-binding enzyme FED54_RS05925 PF02770 Acyl-CoA dehydrogenase, middle domain FED54_RS05925 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FED54_RS05925 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FED54_RS05930 PF00975 Thioesterase domain FED54_RS05930 PF14765 Polyketide synthase dehydratase FED54_RS05930 PF08242 Methyltransferase domain FED54_RS05930 PF02801 Beta-ketoacyl synthase, C-terminal domain FED54_RS05930 PF00109 Beta-ketoacyl synthase, N-terminal domain FED54_RS05930 PF16197 Ketoacyl-synthetase C-terminal extension FED54_RS05930 PF00550 Phosphopantetheine attachment site FED54_RS05950 PF16363 GDP-mannose 4,6 dehydratase FED54_RS05955 PF01648 4'-phosphopantetheinyl transferase superfamily FED54_RS05970 PF01722 BolA-like protein FED54_RS05980 PF13614 AAA domain FED54_RS05995 PF09335 SNARE associated Golgi protein FED54_RS06000 PF07681 DoxX FED54_RS06005 PF04286 Protein of unknown function (DUF445) FED54_RS06010 PF00117 Glutamine amidotransferase class-I FED54_RS06010 PF00958 GMP synthase C terminal domain FED54_RS06010 PF02540 NAD synthase FED54_RS06015 PF13427 Domain of unknown function (DUF4111) FED54_RS06015 PF01909 Nucleotidyltransferase domain FED54_RS06020 PF03551 Transcriptional regulator PadR-like family FED54_RS06030 PF05726 Pirin C-terminal cupin domain FED54_RS06030 PF02678 Pirin FED54_RS06050 PF03485 Arginyl tRNA synthetase N terminal domain FED54_RS06050 PF05746 DALR anticodon binding domain FED54_RS06050 PF00750 tRNA synthetases class I (R) FED54_RS06055 PF03949 Malic enzyme, NAD binding domain FED54_RS06055 PF00390 Malic enzyme, N-terminal domain FED54_RS06060 PF04261 Dyp-type peroxidase family FED54_RS06065 PF01810 LysE type translocator FED54_RS06070 PF00950 ABC 3 transport family FED54_RS06075 PF00005 ABC transporter FED54_RS06095 PF00119 ATP synthase A chain FED54_RS06100 PF00137 ATP synthase subunit C FED54_RS06105 PF00430 ATP synthase B/B' CF(0) FED54_RS06110 PF00213 ATP synthase delta (OSCP) subunit FED54_RS06115 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FED54_RS06115 PF00306 ATP synthase alpha/beta chain, C terminal domain FED54_RS06115 PF02874 ATP synthase alpha/beta family, beta-barrel domain FED54_RS06120 PF00231 ATP synthase FED54_RS06125 PF02874 ATP synthase alpha/beta family, beta-barrel domain FED54_RS06125 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FED54_RS06130 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FED54_RS06140 PF00255 Glutathione peroxidase FED54_RS06150 PF07690 Major Facilitator Superfamily FED54_RS06155 PF00440 Bacterial regulatory proteins, tetR family FED54_RS06160 PF00892 EamA-like transporter family FED54_RS06165 PF01300 Telomere recombination FED54_RS06170 PF02481 DNA recombination-mediator protein A FED54_RS06170 PF17782 DprA winged helix domain FED54_RS06180 PF01327 Polypeptide deformylase FED54_RS06205 PF00440 Bacterial regulatory proteins, tetR family FED54_RS06240 PF00291 Pyridoxal-phosphate dependent enzyme FED54_RS06250 PF03358 NADPH-dependent FMN reductase FED54_RS06270 PF11842 Domain of unknown function (DUF3362) FED54_RS06270 PF08497 Radical SAM N-terminal FED54_RS06270 PF04055 Radical SAM superfamily FED54_RS06290 PF06123 Inner membrane protein CreD FED54_RS06295 PF00672 HAMP domain FED54_RS06295 PF00512 His Kinase A (phospho-acceptor) domain FED54_RS06295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED54_RS06300 PF00072 Response regulator receiver domain FED54_RS06300 PF00486 Transcriptional regulatory protein, C terminal FED54_RS06305 PF11799 impB/mucB/samB family C-terminal domain FED54_RS06305 PF11798 IMS family HHH motif FED54_RS06305 PF00817 impB/mucB/samB family FED54_RS06315 PF07690 Major Facilitator Superfamily FED54_RS06320 PF03641 Possible lysine decarboxylase FED54_RS06325 PF03741 Integral membrane protein TerC family FED54_RS06325 PF03471 Transporter associated domain FED54_RS06330 PF02810 SEC-C motif FED54_RS06335 PF03458 UPF0126 domain FED54_RS06340 PF07690 Major Facilitator Superfamily FED54_RS06345 PF00521 DNA gyrase/topoisomerase IV, subunit A FED54_RS06345 PF03989 DNA gyrase C-terminal domain, beta-propeller FED54_RS06350 PF00501 AMP-binding enzyme FED54_RS06350 PF13193 AMP-binding enzyme C-terminal domain FED54_RS06365 PF00719 Inorganic pyrophosphatase FED54_RS06370 PF03573 outer membrane porin, OprD family FED54_RS06380 PF00701 Dihydrodipicolinate synthetase family FED54_RS06390 PF00155 Aminotransferase class I and II FED54_RS06390 PF00392 Bacterial regulatory proteins, gntR family FED54_RS06395 PF01078 Magnesium chelatase, subunit ChlI FED54_RS06395 PF13335 Magnesium chelatase, subunit ChlI C-terminal FED54_RS06405 PF00665 Integrase core domain FED54_RS06480 PF13335 Magnesium chelatase, subunit ChlI C-terminal FED54_RS06480 PF01078 Magnesium chelatase, subunit ChlI FED54_RS06490 PF00543 Nitrogen regulatory protein P-II FED54_RS06495 PF00909 Ammonium Transporter Family FED54_RS06500 PF03477 ATP cone domain FED54_RS06505 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FED54_RS06505 PF01872 RibD C-terminal domain FED54_RS06515 PF00677 Lumazine binding domain FED54_RS06535 PF00883 Cytosol aminopeptidase family, catalytic domain FED54_RS06535 PF02789 Cytosol aminopeptidase family, N-terminal domain FED54_RS06545 PF03739 Lipopolysaccharide export system permease LptF/LptG FED54_RS06550 PF01676 Metalloenzyme superfamily FED54_RS06550 PF06415 BPG-independent PGAM N-terminus (iPGM_N) FED54_RS06555 PF03572 Peptidase family S41 FED54_RS06555 PF00595 PDZ domain FED54_RS06560 PF00072 Response regulator receiver domain FED54_RS06560 PF00158 Sigma-54 interaction domain FED54_RS06560 PF02954 Bacterial regulatory protein, Fis family FED54_RS06565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED54_RS06565 PF00512 His Kinase A (phospho-acceptor) domain FED54_RS06570 PF00072 Response regulator receiver domain FED54_RS06570 PF00196 Bacterial regulatory proteins, luxR family FED54_RS06575 PF00768 D-alanyl-D-alanine carboxypeptidase FED54_RS06580 PF00291 Pyridoxal-phosphate dependent enzyme FED54_RS06585 PF01842 ACT domain FED54_RS06585 PF00742 Homoserine dehydrogenase FED54_RS06585 PF03447 Homoserine dehydrogenase, NAD binding domain FED54_RS06590 PF13098 Thioredoxin-like domain FED54_RS06590 PF10411 Disulfide bond isomerase protein N-terminus FED54_RS06595 PF00589 Phage integrase family FED54_RS06595 PF02899 Phage integrase, N-terminal SAM-like domain FED54_RS06605 PF07664 Ferrous iron transport protein B C terminus FED54_RS06605 PF07670 Nucleoside recognition FED54_RS06605 PF02421 Ferrous iron transport protein B FED54_RS06615 PF08245 Mur ligase middle domain FED54_RS06615 PF02875 Mur ligase family, glutamate ligase domain FED54_RS06620 PF01098 Cell cycle protein FED54_RS06625 PF00749 tRNA synthetases class I (E and Q), catalytic domain FED54_RS06630 PF01258 Prokaryotic dksA/traR C4-type zinc finger FED54_RS06635 PF00149 Calcineurin-like phosphoesterase FED54_RS06640 PF00293 NUDIX domain FED54_RS06645 PF13667 ThiC-associated domain FED54_RS06645 PF01964 Radical SAM ThiC family FED54_RS06660 PF00892 EamA-like transporter family FED54_RS06665 PF02321 Outer membrane efflux protein FED54_RS06670 PF01895 PhoU domain FED54_RS06675 PF04362 Bacterial Fe(2+) trafficking FED54_RS06680 PF00206 Lyase FED54_RS06680 PF14698 Argininosuccinate lyase C-terminal FED54_RS06685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED54_RS06685 PF07694 5TMR of 5TMR-LYT FED54_RS06685 PF06580 Histidine kinase FED54_RS06690 PF04397 LytTr DNA-binding domain FED54_RS06690 PF00072 Response regulator receiver domain FED54_RS06695 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FED54_RS06695 PF03900 Porphobilinogen deaminase, C-terminal domain FED54_RS06720 PF00816 H-NS histone family FED54_RS06735 PF00263 Bacterial type II and III secretion system protein FED54_RS06735 PF03958 Bacterial type II/III secretion system short domain FED54_RS06740 PF00498 FHA domain FED54_RS06740 PF12401 Protein of unknown function (DUF2662) FED54_RS06745 PF13419 Haloacid dehalogenase-like hydrolase FED54_RS06750 PF04715 Anthranilate synthase component I, N terminal region FED54_RS06750 PF00425 chorismate binding enzyme FED54_RS06785 PF00584 SecE/Sec61-gamma subunits of protein translocation complex FED54_RS06790 PF02357 Transcription termination factor nusG FED54_RS06790 PF00467 KOW motif FED54_RS06795 PF03946 Ribosomal protein L11, N-terminal domain FED54_RS06795 PF00298 Ribosomal protein L11, RNA binding domain FED54_RS06800 PF00687 Ribosomal protein L1p/L10e family FED54_RS06805 PF00466 Ribosomal protein L10 FED54_RS06810 PF00542 Ribosomal protein L7/L12 C-terminal domain FED54_RS06810 PF16320 Ribosomal protein L7/L12 dimerisation domain FED54_RS06815 PF04563 RNA polymerase beta subunit FED54_RS06815 PF04561 RNA polymerase Rpb2, domain 2 FED54_RS06815 PF04565 RNA polymerase Rpb2, domain 3 FED54_RS06815 PF10385 RNA polymerase beta subunit external 1 domain FED54_RS06815 PF00562 RNA polymerase Rpb2, domain 6 FED54_RS06815 PF04560 RNA polymerase Rpb2, domain 7 FED54_RS06820 PF00623 RNA polymerase Rpb1, domain 2 FED54_RS06820 PF04983 RNA polymerase Rpb1, domain 3 FED54_RS06820 PF05000 RNA polymerase Rpb1, domain 4 FED54_RS06820 PF04998 RNA polymerase Rpb1, domain 5 FED54_RS06820 PF04997 RNA polymerase Rpb1, domain 1 FED54_RS06845 PF13726 Na+-H+ antiporter family FED54_RS06845 PF03553 Na+/H+ antiporter family FED54_RS06860 PF00183 Hsp90 protein FED54_RS06860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED54_RS06875 PF01323 DSBA-like thioredoxin domain FED54_RS06885 PF09278 MerR, DNA binding FED54_RS06885 PF00376 MerR family regulatory protein FED54_RS06905 PF00108 Thiolase, N-terminal domain FED54_RS06905 PF02803 Thiolase, C-terminal domain FED54_RS06910 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FED54_RS06910 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FED54_RS06910 PF00378 Enoyl-CoA hydratase/isomerase FED54_RS06930 PF08459 UvrC Helix-hairpin-helix N-terminal FED54_RS06930 PF02151 UvrB/uvrC motif FED54_RS06930 PF01541 GIY-YIG catalytic domain FED54_RS06940 PF01066 CDP-alcohol phosphatidyltransferase FED54_RS06945 PF02805 Metal binding domain of Ada FED54_RS06945 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FED54_RS06945 PF12833 Helix-turn-helix domain FED54_RS06945 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FED54_RS06970 PF13533 Biotin-lipoyl like FED54_RS06975 PF03652 Holliday junction resolvase FED54_RS06980 PF02622 Uncharacterized ACR, COG1678 FED54_RS06985 PF02463 RecF/RecN/SMC N terminal domain FED54_RS06995 PF06865 Pyrimidine/purine nucleoside phosphorylase FED54_RS07000 PF00588 SpoU rRNA Methylase family FED54_RS07000 PF08032 RNA 2'-O ribose methyltransferase substrate binding FED54_RS07010 PF01121 Dephospho-CoA kinase FED54_RS07015 PF01478 Type IV leader peptidase family FED54_RS07015 PF06750 Bacterial Peptidase A24 N-terminal domain FED54_RS07020 PF00482 Type II secretion system (T2SS), protein F FED54_RS07025 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FED54_RS07025 PF00437 Type II/IV secretion system protein FED54_RS07030 PF00121 Triosephosphate isomerase FED54_RS07035 PF03840 Preprotein translocase SecG subunit FED54_RS07055 PF17384 RimP C-terminal SH3 domain FED54_RS07055 PF02576 RimP N-terminal domain FED54_RS07060 PF08529 NusA N-terminal domain FED54_RS07060 PF00575 S1 RNA binding domain FED54_RS07060 PF13184 NusA-like KH domain FED54_RS07065 PF11987 Translation-initiation factor 2 FED54_RS07065 PF04760 Translation initiation factor IF-2, N-terminal region FED54_RS07065 PF00009 Elongation factor Tu GTP binding domain FED54_RS07065 PF08364 Bacterial translation initiation factor IF-2 associated region FED54_RS07070 PF02033 Ribosome-binding factor A FED54_RS07075 PF03334 Na+/H+ antiporter subunit FED54_RS07080 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) FED54_RS07085 PF01899 Na+/H+ ion antiporter subunit FED54_RS07090 PF00361 Proton-conducting membrane transporter FED54_RS07095 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FED54_RS07100 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter FED54_RS07100 PF00361 Proton-conducting membrane transporter FED54_RS07100 PF13244 Domain of unknown function (DUF4040) FED54_RS07100 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FED54_RS07115 PF01502 Phosphoribosyl-AMP cyclohydrolase FED54_RS07125 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FED54_RS07130 PF01494 FAD binding domain FED54_RS07135 PF03109 ABC1 family FED54_RS07145 PF01209 ubiE/COQ5 methyltransferase family FED54_RS07155 PF03976 Polyphosphate kinase 2 (PPK2) FED54_RS07165 PF17946 RecC C-terminal domain FED54_RS07170 PF13361 UvrD-like helicase C-terminal domain FED54_RS07170 PF00580 UvrD/REP helicase N-terminal domain FED54_RS07170 PF12705 PD-(D/E)XK nuclease superfamily FED54_RS07175 PF13538 UvrD-like helicase C-terminal domain FED54_RS07180 PF00144 Beta-lactamase FED54_RS07185 PF00312 Ribosomal protein S15 FED54_RS07190 PF03725 3' exoribonuclease family, domain 2 FED54_RS07190 PF00575 S1 RNA binding domain FED54_RS07190 PF01138 3' exoribonuclease family, domain 1 FED54_RS07190 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FED54_RS07190 PF00013 KH domain FED54_RS07195 PF01544 CorA-like Mg2+ transporter protein FED54_RS07205 PF00226 DnaJ domain FED54_RS07205 PF01556 DnaJ C terminal domain FED54_RS07215 PF01430 Hsp33 protein FED54_RS07220 PF02254 TrkA-N domain FED54_RS07220 PF00999 Sodium/hydrogen exchanger family FED54_RS07225 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FED54_RS07225 PF00271 Helicase conserved C-terminal domain FED54_RS07225 PF18074 Primosomal protein N C-terminal domain FED54_RS07225 PF00270 DEAD/DEAH box helicase FED54_RS07225 PF17764 3′ DNA-binding domain (3′BD) FED54_RS07230 PF00482 Type II secretion system (T2SS), protein F FED54_RS07235 PF08334 Type II secretion system (T2SS), protein G FED54_RS07235 PF07963 Prokaryotic N-terminal methylation motif FED54_RS07245 PF01588 Putative tRNA binding domain FED54_RS07250 PF00795 Carbon-nitrogen hydrolase FED54_RS07255 PF03471 Transporter associated domain FED54_RS07255 PF00571 CBS domain FED54_RS07260 PF01206 Sulfurtransferase TusA FED54_RS07280 PF01177 Asp/Glu/Hydantoin racemase FED54_RS07290 PF00762 Ferrochelatase FED54_RS07295 PF00753 Metallo-beta-lactamase superfamily FED54_RS07300 PF03884 DNA gyrase inhibitor YacG FED54_RS07310 PF13247 4Fe-4S dicluster domain FED54_RS07310 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FED54_RS07310 PF07992 Pyridine nucleotide-disulphide oxidoreductase FED54_RS07320 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FED54_RS07335 PF01197 Ribosomal protein L31 FED54_RS07340 PF03109 ABC1 family FED54_RS07345 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FED54_RS07345 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FED54_RS07350 PF02770 Acyl-CoA dehydrogenase, middle domain FED54_RS07350 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FED54_RS07350 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FED54_RS07355 PF01554 MatE FED54_RS07365 PF06969 HemN C-terminal domain FED54_RS07365 PF04055 Radical SAM superfamily FED54_RS07370 PF00106 short chain dehydrogenase FED54_RS07375 PF03466 LysR substrate binding domain FED54_RS07375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_RS07395 PF12111 Polyribonucleotide phosphorylase C terminal FED54_RS07395 PF00575 S1 RNA binding domain FED54_RS07395 PF10150 Ribonuclease E/G family FED54_RS07405 PF01479 S4 domain FED54_RS07405 PF00849 RNA pseudouridylate synthase FED54_RS07410 PF13419 Haloacid dehalogenase-like hydrolase FED54_RS07415 PF13280 WYL domain FED54_RS07415 PF08279 HTH domain FED54_RS07420 PF02798 Glutathione S-transferase, N-terminal domain FED54_RS07430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_RS07430 PF03466 LysR substrate binding domain FED54_RS07435 PF12706 Beta-lactamase superfamily domain FED54_RS07440 PF00141 Peroxidase FED54_RS07445 PF01590 GAF domain FED54_RS07445 PF02896 PEP-utilising enzyme, TIM barrel domain FED54_RS07445 PF05524 PEP-utilising enzyme, N-terminal FED54_RS07445 PF00391 PEP-utilising enzyme, mobile domain FED54_RS07450 PF00293 NUDIX domain FED54_RS07460 PF03466 LysR substrate binding domain FED54_RS07460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_RS07470 PF00330 Aconitase family (aconitate hydratase) FED54_RS07475 PF00694 Aconitase C-terminal domain FED54_RS07485 PF00180 Isocitrate/isopropylmalate dehydrogenase FED54_RS07500 PF01176 Translation initiation factor 1A / IF-1 FED54_RS07510 PF01416 tRNA pseudouridine synthase FED54_RS07530 PF02774 Semialdehyde dehydrogenase, dimerisation domain FED54_RS07530 PF01118 Semialdehyde dehydrogenase, NAD binding domain FED54_RS07560 PF00905 Penicillin binding protein transpeptidase domain FED54_RS07575 PF00375 Sodium:dicarboxylate symporter family FED54_RS07585 PF03279 Bacterial lipid A biosynthesis acyltransferase FED54_RS07590 PF01810 LysE type translocator FED54_RS07600 PF00005 ABC transporter FED54_RS07600 PF12848 ABC transporter FED54_RS07600 PF16326 ABC transporter C-terminal domain FED54_RS07605 PF04102 SlyX FED54_RS07610 PF08240 Alcohol dehydrogenase GroES-like domain FED54_RS07610 PF00107 Zinc-binding dehydrogenase FED54_RS07615 PF01638 HxlR-like helix-turn-helix FED54_RS07625 PF08272 Topoisomerase I zinc-ribbon-like FED54_RS07625 PF01751 Toprim domain FED54_RS07625 PF01131 DNA topoisomerase FED54_RS07625 PF01396 Topoisomerase DNA binding C4 zinc finger FED54_RS07640 PF13361 UvrD-like helicase C-terminal domain FED54_RS07640 PF00580 UvrD/REP helicase N-terminal domain FED54_RS07645 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) FED54_RS07665 PF00999 Sodium/hydrogen exchanger family FED54_RS07665 PF02254 TrkA-N domain FED54_RS07670 PF00471 Ribosomal protein L33 FED54_RS07675 PF00830 Ribosomal L28 family FED54_RS07680 PF00171 Aldehyde dehydrogenase family FED54_RS07690 PF00551 Formyl transferase FED54_RS07690 PF01842 ACT domain FED54_RS07700 PF01618 MotA/TolQ/ExbB proton channel family FED54_RS07710 PF01625 Peptide methionine sulfoxide reductase FED54_RS07720 PF00186 Dihydrofolate reductase FED54_RS07725 PF00303 Thymidylate synthase FED54_RS07740 PF01790 Prolipoprotein diacylglyceryl transferase FED54_RS07760 PF00902 Sec-independent protein translocase protein (TatC) FED54_RS07765 PF02416 mttA/Hcf106 family FED54_RS07770 PF02416 mttA/Hcf106 family FED54_RS07780 PF01725 Ham1 family FED54_RS07795 PF07021 Methionine biosynthesis protein MetW FED54_RS07795 PF00561 alpha/beta hydrolase fold FED54_RS07800 PF00561 alpha/beta hydrolase fold FED54_RS07805 PF08502 LeuA allosteric (dimerisation) domain FED54_RS07805 PF00682 HMGL-like FED54_RS07810 PF18331 PKHD-type hydroxylase C-terminal domain FED54_RS07810 PF13640 2OG-Fe(II) oxygenase superfamily FED54_RS07815 PF07715 TonB-dependent Receptor Plug Domain FED54_RS07815 PF00593 TonB dependent receptor FED54_RS07865 PF00216 Bacterial DNA-binding protein FED54_RS07890 PF13401 AAA domain FED54_RS07890 PF01471 Putative peptidoglycan binding domain FED54_RS07915 PF10502 Signal peptidase, peptidase S26 FED54_RS07945 PF11985 Protein of unknown function (DUF3486) FED54_RS07950 PF03237 Terminase-like family FED54_RS07965 PF06074 Protein of unknown function (DUF935) FED54_RS07970 PF04233 Phage Mu protein F like protein FED54_RS07975 PF05069 Phage virion morphogenesis family FED54_RS07990 PF10124 Mu-like prophage major head subunit gpT FED54_RS08085 PF05698 Bacterial trigger factor protein (TF) C-terminus FED54_RS08085 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FED54_RS08085 PF05697 Bacterial trigger factor protein (TF) FED54_RS08090 PF00574 Clp protease FED54_RS08095 PF10431 C-terminal, D2-small domain, of ClpB protein FED54_RS08095 PF06689 ClpX C4-type zinc finger FED54_RS08095 PF07724 AAA domain (Cdc48 subfamily) FED54_RS08110 PF05681 Fumarate hydratase (Fumerase) FED54_RS08110 PF05683 Fumarase C-terminus FED54_RS08115 PF07085 DRTGG domain FED54_RS08115 PF01515 Phosphate acetyl/butaryl transferase FED54_RS08120 PF00871 Acetokinase family FED54_RS08125 PF00920 Dehydratase family FED54_RS08130 PF01081 KDPG and KHG aldolase FED54_RS08135 PF02447 GntP family permease FED54_RS08140 PF01202 Shikimate kinase FED54_RS08145 PF00171 Aldehyde dehydrogenase family FED54_RS08150 PF00171 Aldehyde dehydrogenase family FED54_RS08155 PF00561 alpha/beta hydrolase fold FED54_RS08165 PF00933 Glycosyl hydrolase family 3 N terminal domain FED54_RS08170 PF17804 Tail specific protease N-terminal domain FED54_RS08170 PF03572 Peptidase family S41 FED54_RS08170 PF00595 PDZ domain FED54_RS08170 PF11818 C-terminal domain of tail specific protease (DUF3340) FED54_RS08175 PF13439 Glycosyltransferase Family 4 FED54_RS08175 PF00534 Glycosyl transferases group 1 FED54_RS08180 PF01569 PAP2 superfamily FED54_RS08185 PF04384 Iron-sulphur cluster assembly FED54_RS08190 PF00334 Nucleoside diphosphate kinase FED54_RS08195 PF04055 Radical SAM superfamily FED54_RS08205 PF13464 Domain of unknown function (DUF4115) FED54_RS08210 PF04551 GcpE protein FED54_RS08215 PF13393 Histidyl-tRNA synthetase FED54_RS08215 PF03129 Anticodon binding domain FED54_RS08225 PF13360 PQQ-like domain FED54_RS08230 PF01926 50S ribosome-binding GTPase FED54_RS08230 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FED54_RS08240 PF02556 Preprotein translocase subunit SecB FED54_RS08245 PF00462 Glutaredoxin FED54_RS08255 PF03193 RsgA GTPase FED54_RS08260 PF00929 Exonuclease FED54_RS08275 PF02321 Outer membrane efflux protein FED54_RS08280 PF02687 FtsX-like permease family FED54_RS08280 PF00005 ABC transporter FED54_RS08280 PF12704 MacB-like periplasmic core domain FED54_RS08285 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FED54_RS08300 PF09334 tRNA synthetases class I (M) FED54_RS08300 PF13603 Leucyl-tRNA synthetase, Domain 2 FED54_RS08300 PF08264 Anticodon-binding domain of tRNA FED54_RS08300 PF00133 tRNA synthetases class I (I, L, M and V) FED54_RS08310 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FED54_RS08310 PF00205 Thiamine pyrophosphate enzyme, central domain FED54_RS08310 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FED54_RS08315 PF10369 Small subunit of acetolactate synthase FED54_RS08320 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FED54_RS08320 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FED54_RS08325 PF00990 Diguanylate cyclase, GGDEF domain FED54_RS08325 PF00563 EAL domain FED54_RS08325 PF03707 Bacterial signalling protein N terminal repeat FED54_RS08350 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) FED54_RS08350 PF04717 Type VI secretion system, phage-baseplate injector FED54_RS08350 PF13296 Putative type VI secretion system Rhs element Vgr FED54_RS08375 PF16658 Class II release factor RF3, C-terminal domain FED54_RS08375 PF03144 Elongation factor Tu domain 2 FED54_RS08375 PF00009 Elongation factor Tu GTP binding domain FED54_RS08390 PF01026 TatD related DNase FED54_RS08395 PF00330 Aconitase family (aconitate hydratase) FED54_RS08395 PF00694 Aconitase C-terminal domain FED54_RS08405 PF00899 ThiF family FED54_RS08415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_RS08415 PF03466 LysR substrate binding domain FED54_RS08425 PF01207 Dihydrouridine synthase (Dus) FED54_RS08430 PF00589 Phage integrase family FED54_RS08525 PF00512 His Kinase A (phospho-acceptor) domain FED54_RS08525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED54_RS08525 PF00672 HAMP domain FED54_RS08530 PF00486 Transcriptional regulatory protein, C terminal FED54_RS08530 PF00072 Response regulator receiver domain FED54_RS08540 PF00394 Multicopper oxidase FED54_RS08540 PF07732 Multicopper oxidase FED54_RS08540 PF07731 Multicopper oxidase FED54_RS08550 PF13411 MerR HTH family regulatory protein FED54_RS08555 PF01545 Cation efflux family FED54_RS08565 PF07664 Ferrous iron transport protein B C terminus FED54_RS08565 PF02421 Ferrous iron transport protein B FED54_RS08565 PF07670 Nucleoside recognition FED54_RS08580 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FED54_RS08585 PF00873 AcrB/AcrD/AcrF family FED54_RS08595 PF03960 ArsC family FED54_RS08600 PF01022 Bacterial regulatory protein, arsR family FED54_RS08610 PF01758 Sodium Bile acid symporter family FED54_RS08615 PF03358 NADPH-dependent FMN reductase FED54_RS08630 PF07690 Major Facilitator Superfamily FED54_RS08640 PF00892 EamA-like transporter family FED54_RS08645 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FED54_RS08645 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FED54_RS08650 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch FED54_RS08655 PF02233 NAD(P) transhydrogenase beta subunit FED54_RS08660 PF00106 short chain dehydrogenase FED54_RS08670 PF01261 Xylose isomerase-like TIM barrel FED54_RS08675 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FED54_RS08675 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FED54_RS08680 PF00378 Enoyl-CoA hydratase/isomerase FED54_RS08685 PF01627 Hpt domain FED54_RS08685 PF00072 Response regulator receiver domain FED54_RS08685 PF00672 HAMP domain FED54_RS08685 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FED54_RS08685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED54_RS08685 PF00512 His Kinase A (phospho-acceptor) domain FED54_RS08690 PF00291 Pyridoxal-phosphate dependent enzyme FED54_RS08700 PF05958 tRNA (Uracil-5-)-methyltransferase FED54_RS08705 PF02824 TGS domain FED54_RS08705 PF04607 Region found in RelA / SpoT proteins FED54_RS08705 PF13291 ACT domain FED54_RS08715 PF03819 MazG nucleotide pyrophosphohydrolase domain FED54_RS08725 PF12626 Polymerase A arginine-rich C-terminus FED54_RS08725 PF12627 Probable RNA and SrmB- binding site of polymerase A FED54_RS08725 PF01743 Poly A polymerase head domain FED54_RS08730 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FED54_RS08735 PF02548 Ketopantoate hydroxymethyltransferase FED54_RS08740 PF02569 Pantoate-beta-alanine ligase FED54_RS08745 PF03668 P-loop ATPase protein family FED54_RS08750 PF00381 PTS HPr component phosphorylation site FED54_RS08755 PF04751 Protein of unknown function (DUF615) FED54_RS08775 PF03129 Anticodon binding domain FED54_RS08775 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FED54_RS08775 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FED54_RS08775 PF02824 TGS domain FED54_RS08780 PF05198 Translation initiation factor IF-3, N-terminal domain FED54_RS08780 PF00707 Translation initiation factor IF-3, C-terminal domain FED54_RS08790 PF02798 Glutathione S-transferase, N-terminal domain FED54_RS08790 PF00043 Glutathione S-transferase, C-terminal domain FED54_RS08795 PF09335 SNARE associated Golgi protein FED54_RS08800 PF07690 Major Facilitator Superfamily FED54_RS08805 PF01632 Ribosomal protein L35 FED54_RS08810 PF00453 Ribosomal protein L20 FED54_RS08830 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FED54_RS08830 PF01409 tRNA synthetases class II core domain (F) FED54_RS08835 PF03483 B3/4 domain FED54_RS08835 PF03484 tRNA synthetase B5 domain FED54_RS08835 PF03147 Ferredoxin-fold anticodon binding domain FED54_RS08835 PF01588 Putative tRNA binding domain FED54_RS08835 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FED54_RS08840 PF00216 Bacterial DNA-binding protein FED54_RS08855 PF07497 Rho termination factor, RNA-binding domain FED54_RS08855 PF07498 Rho termination factor, N-terminal domain FED54_RS08855 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FED54_RS08860 PF00085 Thioredoxin FED54_RS08865 PF02541 Ppx/GppA phosphatase family FED54_RS08870 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FED54_RS08875 PF01171 PP-loop family FED54_RS08875 PF09179 TilS substrate binding domain FED54_RS08875 PF11734 TilS substrate C-terminal domain FED54_RS08880 PF03807 NADP oxidoreductase coenzyme F420-dependent FED54_RS08880 PF14748 Pyrroline-5-carboxylate reductase dimerisation FED54_RS08885 PF02325 YGGT family FED54_RS08890 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FED54_RS08890 PF00476 DNA polymerase family A FED54_RS08890 PF01367 5'-3' exonuclease, C-terminal SAM fold FED54_RS08890 PF01612 3'-5' exonuclease FED54_RS08910 PF00437 Type II/IV secretion system protein FED54_RS08915 PF02566 OsmC-like protein FED54_RS08920 PF01047 MarR family FED54_RS08930 PF00795 Carbon-nitrogen hydrolase FED54_RS08975 PF00309 Sigma-54 factor, Activator interacting domain (AID) FED54_RS08975 PF04963 Sigma-54 factor, core binding domain FED54_RS08975 PF04552 Sigma-54, DNA binding domain FED54_RS08980 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FED54_RS08985 PF01722 BolA-like protein FED54_RS08990 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FED54_RS08995 PF01634 ATP phosphoribosyltransferase FED54_RS09000 PF00815 Histidinol dehydrogenase FED54_RS09005 PF00155 Aminotransferase class I and II FED54_RS09010 PF04715 Anthranilate synthase component I, N terminal region FED54_RS09010 PF00425 chorismate binding enzyme FED54_RS09050 PF00293 NUDIX domain FED54_RS09055 PF00132 Bacterial transferase hexapeptide (six repeats) FED54_RS09060 PF00814 Glycoprotease family FED54_RS09065 PF04445 Putative SAM-dependent methyltransferase FED54_RS09075 PF00756 Putative esterase FED54_RS09085 PF00834 Ribulose-phosphate 3 epimerase family FED54_RS09100 PF00394 Multicopper oxidase FED54_RS09100 PF07732 Multicopper oxidase FED54_RS09100 PF07731 Multicopper oxidase FED54_RS09115 PF00893 Small Multidrug Resistance protein FED54_RS09120 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FED54_RS09120 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FED54_RS09125 PF01960 ArgJ family FED54_RS09130 PF02445 Quinolinate synthetase A protein FED54_RS09155 PF00962 Adenosine/AMP deaminase FED54_RS09175 PF00107 Zinc-binding dehydrogenase FED54_RS09175 PF08240 Alcohol dehydrogenase GroES-like domain FED54_RS09180 PF03466 LysR substrate binding domain FED54_RS09180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_RS09185 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FED54_RS09185 PF02770 Acyl-CoA dehydrogenase, middle domain FED54_RS09185 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FED54_RS09190 PF07690 Major Facilitator Superfamily FED54_RS09195 PF02515 CoA-transferase family III FED54_RS09205 PF00890 FAD binding domain FED54_RS09205 PF14537 Cytochrome c3 FED54_RS09210 PF03466 LysR substrate binding domain FED54_RS09210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_RS09220 PF07690 Major Facilitator Superfamily FED54_RS09230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_RS09230 PF03466 LysR substrate binding domain FED54_RS09240 PF01546 Peptidase family M20/M25/M40 FED54_RS09240 PF07687 Peptidase dimerisation domain FED54_RS09245 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term FED54_RS09245 PF12833 Helix-turn-helix domain FED54_RS09260 PF03466 LysR substrate binding domain FED54_RS09260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_RS09270 PF01717 Cobalamin-independent synthase, Catalytic domain FED54_RS09270 PF08267 Cobalamin-independent synthase, N-terminal domain FED54_RS09275 PF01613 Flavin reductase like domain FED54_RS09285 PF16925 Tetracyclin repressor-like, C-terminal domain FED54_RS09285 PF00440 Bacterial regulatory proteins, tetR family FED54_RS09295 PF17074 Darcynin, domain of unknown function FED54_RS09305 PF02567 Phenazine biosynthesis-like protein FED54_RS09315 PF00268 Ribonucleotide reductase, small chain FED54_RS09325 PF03477 ATP cone domain FED54_RS09325 PF00317 Ribonucleotide reductase, all-alpha domain FED54_RS09325 PF02867 Ribonucleotide reductase, barrel domain FED54_RS09335 PF00486 Transcriptional regulatory protein, C terminal FED54_RS09335 PF00072 Response regulator receiver domain FED54_RS09340 PF00672 HAMP domain FED54_RS09340 PF00512 His Kinase A (phospho-acceptor) domain FED54_RS09340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED54_RS09350 PF00990 Diguanylate cyclase, GGDEF domain FED54_RS09350 PF17151 Periplasmic sensor domain FED54_RS09355 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 FED54_RS09360 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FED54_RS09365 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FED54_RS09365 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FED54_RS09375 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FED54_RS09375 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FED54_RS09375 PF10531 SLBB domain FED54_RS09380 PF00384 Molybdopterin oxidoreductase FED54_RS09380 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FED54_RS09380 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FED54_RS09385 PF00146 NADH dehydrogenase FED54_RS09390 PF12838 4Fe-4S dicluster domain FED54_RS09395 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 FED54_RS09400 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FED54_RS09405 PF00361 Proton-conducting membrane transporter FED54_RS09405 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FED54_RS09410 PF00361 Proton-conducting membrane transporter FED54_RS09415 PF00361 Proton-conducting membrane transporter FED54_RS09425 PF00313 'Cold-shock' DNA-binding domain FED54_RS09430 PF03466 LysR substrate binding domain FED54_RS09430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_RS09435 PF00970 Oxidoreductase FAD-binding domain FED54_RS09435 PF00175 Oxidoreductase NAD-binding domain FED54_RS09450 PF05552 Conserved TM helix FED54_RS09465 PF00291 Pyridoxal-phosphate dependent enzyme FED54_RS09470 PF13533 Biotin-lipoyl like FED54_RS09495 PF01588 Putative tRNA binding domain FED54_RS09495 PF09334 tRNA synthetases class I (M) FED54_RS09505 PF10609 NUBPL iron-transfer P-loop NTPase FED54_RS09515 PF01048 Phosphorylase superfamily FED54_RS09530 PF00692 dUTPase FED54_RS09565 PF01207 Dihydrouridine synthase (Dus) FED54_RS09575 PF02978 Signal peptide binding domain FED54_RS09575 PF00448 SRP54-type protein, GTPase domain FED54_RS09575 PF02881 SRP54-type protein, helical bundle domain FED54_RS09580 PF03309 Type III pantothenate kinase FED54_RS09590 PF01925 Sulfite exporter TauE/SafE FED54_RS09600 PF06470 SMC proteins Flexible Hinge Domain FED54_RS09600 PF02463 RecF/RecN/SMC N terminal domain FED54_RS09610 PF03120 NAD-dependent DNA ligase OB-fold domain FED54_RS09610 PF12826 Helix-hairpin-helix motif FED54_RS09610 PF03119 NAD-dependent DNA ligase C4 zinc finger domain FED54_RS09610 PF01653 NAD-dependent DNA ligase adenylation domain FED54_RS09610 PF00533 BRCA1 C Terminus (BRCT) domain FED54_RS09615 PF00210 Ferritin-like domain FED54_RS09620 PF07690 Major Facilitator Superfamily FED54_RS09625 PF00982 Glycosyltransferase family 20 FED54_RS09630 PF02358 Trehalose-phosphatase FED54_RS09635 PF08241 Methyltransferase domain FED54_RS09635 PF12697 Alpha/beta hydrolase family FED54_RS09640 PF00202 Aminotransferase class-III FED54_RS09640 PF06968 Biotin and Thiamin Synthesis associated domain FED54_RS09640 PF04055 Radical SAM superfamily FED54_RS09645 PF00155 Aminotransferase class I and II FED54_RS09660 PF00849 RNA pseudouridylate synthase FED54_RS09660 PF01479 S4 domain FED54_RS09665 PF04079 Segregation and condensation complex subunit ScpB FED54_RS09670 PF02616 Segregation and condensation protein ScpA FED54_RS09675 PF01300 Telomere recombination FED54_RS09680 PF04315 Elongation factor P hydroxylase FED54_RS09685 PF02620 Large ribosomal RNA subunit accumulation protein YceD FED54_RS09690 PF01783 Ribosomal L32p protein family FED54_RS09695 PF00698 Acyl transferase domain FED54_RS09705 PF00550 Phosphopantetheine attachment site FED54_RS09710 PF01476 LysM domain FED54_RS09710 PF04972 BON domain FED54_RS09715 PF08543 Phosphomethylpyrimidine kinase FED54_RS09715 PF03070 TENA/THI-4/PQQC family FED54_RS09715 PF02581 Thiamine monophosphate synthase FED54_RS09725 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FED54_RS09740 PF02261 Aspartate decarboxylase FED54_RS09745 PF01195 Peptidyl-tRNA hydrolase FED54_RS09750 PF01386 Ribosomal L25p family FED54_RS09755 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FED54_RS09755 PF14572 Phosphoribosyl synthetase-associated domain FED54_RS09780 PF08544 GHMP kinases C terminal FED54_RS09780 PF00288 GHMP kinases N terminal domain FED54_RS09785 PF03550 Outer membrane lipoprotein LolB FED54_RS09795 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain FED54_RS09795 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain FED54_RS09795 PF01488 Shikimate / quinate 5-dehydrogenase FED54_RS09800 PF08275 DNA primase catalytic core, N-terminal domain FED54_RS09800 PF10410 DnaB-helicase binding domain of primase FED54_RS09800 PF01807 CHC2 zinc finger FED54_RS09800 PF08278 DNA primase DnaG DnaB-binding FED54_RS09805 PF13525 Outer membrane lipoprotein FED54_RS09810 PF01479 S4 domain FED54_RS09810 PF00849 RNA pseudouridylate synthase FED54_RS09815 PF02578 Multi-copper polyphenol oxidoreductase laccase FED54_RS09820 PF03358 NADPH-dependent FMN reductase FED54_RS09825 PF01668 SmpB protein FED54_RS09830 PF01467 Cytidylyltransferase-like FED54_RS09835 PF00037 4Fe-4S binding domain FED54_RS09855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_RS09855 PF03466 LysR substrate binding domain FED54_RS09860 PF00180 Isocitrate/isopropylmalate dehydrogenase FED54_RS09865 PF02028 BCCT, betaine/carnitine/choline family transporter FED54_RS09870 PF07859 alpha/beta hydrolase fold FED54_RS09875 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FED54_RS09875 PF00355 Rieske [2Fe-2S] domain FED54_RS09880 PF00171 Aldehyde dehydrogenase family FED54_RS09885 PF00111 2Fe-2S iron-sulfur cluster binding domain FED54_RS09885 PF00970 Oxidoreductase FAD-binding domain FED54_RS09885 PF00175 Oxidoreductase NAD-binding domain FED54_RS09900 PF02540 NAD synthase FED54_RS09900 PF00795 Carbon-nitrogen hydrolase FED54_RS09910 PF02678 Pirin FED54_RS09910 PF05726 Pirin C-terminal cupin domain FED54_RS09915 PF03653 Uncharacterised protein family (UPF0093) FED54_RS09920 PF00109 Beta-ketoacyl synthase, N-terminal domain FED54_RS09920 PF02801 Beta-ketoacyl synthase, C-terminal domain FED54_RS09930 PF00164 Ribosomal protein S12/S23 FED54_RS09935 PF00177 Ribosomal protein S7p/S5e FED54_RS09940 PF03144 Elongation factor Tu domain 2 FED54_RS09940 PF00009 Elongation factor Tu GTP binding domain FED54_RS09940 PF03764 Elongation factor G, domain IV FED54_RS09940 PF00679 Elongation factor G C-terminus FED54_RS09940 PF14492 Elongation Factor G, domain II FED54_RS09945 PF03143 Elongation factor Tu C-terminal domain FED54_RS09945 PF03144 Elongation factor Tu domain 2 FED54_RS09945 PF00009 Elongation factor Tu GTP binding domain FED54_RS09960 PF00583 Acetyltransferase (GNAT) family FED54_RS09965 PF04377 Arginine-tRNA-protein transferase, C terminus FED54_RS09965 PF04376 Arginine-tRNA-protein transferase, N terminus FED54_RS09970 PF03588 Leucyl/phenylalanyl-tRNA protein transferase FED54_RS09975 PF07992 Pyridine nucleotide-disulphide oxidoreductase FED54_RS09980 PF17854 FtsK alpha domain FED54_RS09980 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FED54_RS09980 PF09397 Ftsk gamma domain FED54_RS09980 PF01580 FtsK/SpoIIIE family FED54_RS09985 PF01810 LysE type translocator FED54_RS10000 PF03776 Septum formation topological specificity factor MinE FED54_RS10005 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FED54_RS10010 PF03775 Septum formation inhibitor MinC, C-terminal domain FED54_RS10020 PF01553 Acyltransferase FED54_RS10025 PF13488 Glycine zipper FED54_RS10025 PF00691 OmpA family FED54_RS10030 PF00580 UvrD/REP helicase N-terminal domain FED54_RS10030 PF13361 UvrD-like helicase C-terminal domain FED54_RS10035 PF00692 dUTPase FED54_RS10040 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FED54_RS10040 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FED54_RS10040 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FED54_RS10040 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FED54_RS10045 PF00696 Amino acid kinase family FED54_RS10055 PF13230 Glutamine amidotransferases class-II FED54_RS10060 PF01814 Hemerythrin HHE cation binding domain FED54_RS10075 PF03658 RnfH family Ubiquitin FED54_RS10080 PF04355 SmpA / OmlA family FED54_RS10085 PF01475 Ferric uptake regulator family FED54_RS10090 PF00437 Type II/IV secretion system protein FED54_RS10095 PF00437 Type II/IV secretion system protein FED54_RS10100 PF01168 Alanine racemase, N-terminal domain FED54_RS10110 PF12320 Type 5 capsule protein repressor C-terminal domain FED54_RS10110 PF00149 Calcineurin-like phosphoesterase FED54_RS10135 PF01370 NAD dependent epimerase/dehydratase family FED54_RS10135 PF08338 Domain of unknown function (DUF1731) FED54_RS10140 PF01266 FAD dependent oxidoreductase FED54_RS10145 PF00490 Delta-aminolevulinic acid dehydratase FED54_RS10150 PF03061 Thioesterase superfamily FED54_RS10155 PF13533 Biotin-lipoyl like FED54_RS10160 PF07690 Major Facilitator Superfamily FED54_RS10220 PF02384 N-6 DNA Methylase FED54_RS10220 PF12161 HsdM N-terminal domain FED54_RS10230 PF08463 EcoEI R protein C-terminal FED54_RS10230 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) FED54_RS10230 PF04851 Type III restriction enzyme, res subunit FED54_RS10230 PF00271 Helicase conserved C-terminal domain FED54_RS10240 PF00083 Sugar (and other) transporter FED54_RS10245 PF00701 Dihydrodipicolinate synthetase family FED54_RS10255 PF04542 Sigma-70 region 2 FED54_RS10255 PF08281 Sigma-70, region 4 FED54_RS10265 PF00593 TonB dependent receptor FED54_RS10265 PF07715 TonB-dependent Receptor Plug Domain FED54_RS10275 PF04575 Protein of unknown function (DUF560) FED54_RS10285 PF01126 Heme oxygenase FED54_RS10310 PF13520 Amino acid permease FED54_RS10315 PF02574 Homocysteine S-methyltransferase FED54_RS10325 PF06039 Malate:quinone oxidoreductase (Mqo) FED54_RS10330 PF00732 GMC oxidoreductase FED54_RS10330 PF05199 GMC oxidoreductase FED54_RS10335 PF00171 Aldehyde dehydrogenase family FED54_RS10340 PF13977 BetI-type transcriptional repressor, C-terminal FED54_RS10340 PF00440 Bacterial regulatory proteins, tetR family FED54_RS10345 PF02028 BCCT, betaine/carnitine/choline family transporter FED54_RS10350 PF02028 BCCT, betaine/carnitine/choline family transporter FED54_RS10360 PF03061 Thioesterase superfamily FED54_RS10370 PF07683 Cobalamin synthesis protein cobW C-terminal domain FED54_RS10370 PF02492 CobW/HypB/UreG, nucleotide-binding domain FED54_RS10375 PF00375 Sodium:dicarboxylate symporter family FED54_RS10380 PF07152 YaeQ protein FED54_RS10385 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FED54_RS10390 PF01522 Polysaccharide deacetylase FED54_RS10390 PF14883 Hypothetical glycosyl hydrolase family 13 FED54_RS10395 PF00535 Glycosyl transferase family 2 FED54_RS10405 PF00378 Enoyl-CoA hydratase/isomerase FED54_RS10420 PF09339 IclR helix-turn-helix domain FED54_RS10420 PF01614 Bacterial transcriptional regulator FED54_RS10425 PF00355 Rieske [2Fe-2S] domain FED54_RS10435 PF00355 Rieske [2Fe-2S] domain FED54_RS10445 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FED54_RS10450 PF14759 Reductase C-terminal FED54_RS10450 PF07992 Pyridine nucleotide-disulphide oxidoreductase FED54_RS10455 PF07690 Major Facilitator Superfamily FED54_RS10465 PF12697 Alpha/beta hydrolase family FED54_RS10475 PF01958 Domain of unknown function DUF108 FED54_RS10475 PF03447 Homoserine dehydrogenase, NAD binding domain FED54_RS10480 PF00171 Aldehyde dehydrogenase family FED54_RS10485 PF00205 Thiamine pyrophosphate enzyme, central domain FED54_RS10485 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FED54_RS10485 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FED54_RS10495 PF07690 Major Facilitator Superfamily FED54_RS10500 PF01327 Polypeptide deformylase FED54_RS10505 PF04960 Glutaminase FED54_RS10510 PF02311 AraC-like ligand binding domain FED54_RS10510 PF12833 Helix-turn-helix domain FED54_RS10515 PF07690 Major Facilitator Superfamily FED54_RS10520 PF01263 Aldose 1-epimerase FED54_RS10535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_RS10535 PF03466 LysR substrate binding domain FED54_RS10545 PF07690 Major Facilitator Superfamily FED54_RS10550 PF00456 Transketolase, thiamine diphosphate binding domain FED54_RS10555 PF02779 Transketolase, pyrimidine binding domain FED54_RS10555 PF02780 Transketolase, C-terminal domain FED54_RS10560 PF02574 Homocysteine S-methyltransferase FED54_RS10560 PF00809 Pterin binding enzyme FED54_RS10560 PF02310 B12 binding domain FED54_RS10560 PF02607 B12 binding domain FED54_RS10560 PF02965 Vitamin B12 dependent methionine synthase, activation domain FED54_RS10565 PF01384 Phosphate transporter family FED54_RS10570 PF00291 Pyridoxal-phosphate dependent enzyme FED54_RS10585 PF03781 Sulfatase-modifying factor enzyme 1 FED54_RS10590 PF00884 Sulfatase FED54_RS10600 PF01521 Iron-sulphur cluster biosynthesis FED54_RS10600 PF01106 NifU-like domain FED54_RS10605 PF07715 TonB-dependent Receptor Plug Domain FED54_RS10605 PF00593 TonB dependent receptor FED54_RS10615 PF00561 alpha/beta hydrolase fold FED54_RS10620 PF00484 Carbonic anhydrase FED54_RS10625 PF13472 GDSL-like Lipase/Acylhydrolase family FED54_RS10630 PF00005 ABC transporter FED54_RS10640 PF01694 Rhomboid family FED54_RS10645 PF00912 Transglycosylase FED54_RS10650 PF17941 Polyphosphate kinase C-terminal domain 1 FED54_RS10650 PF13090 Polyphosphate kinase C-terminal domain 2 FED54_RS10650 PF02503 Polyphosphate kinase middle domain FED54_RS10650 PF13089 Polyphosphate kinase N-terminal domain FED54_RS10665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_RS10665 PF03466 LysR substrate binding domain FED54_RS10670 PF00561 alpha/beta hydrolase fold FED54_RS10675 PF07992 Pyridine nucleotide-disulphide oxidoreductase FED54_RS10675 PF18113 Rubredoxin binding C-terminal domain FED54_RS10680 PF00301 Rubredoxin FED54_RS10695 PF01336 OB-fold nucleic acid binding domain FED54_RS10695 PF00152 tRNA synthetases class II (D, K and N) FED54_RS10700 PF14052 Capsule assembly protein Wzi FED54_RS10710 PF01507 Phosphoadenosine phosphosulfate reductase family FED54_RS10715 PF00009 Elongation factor Tu GTP binding domain FED54_RS10730 PF03600 Citrate transporter FED54_RS10740 PF00571 CBS domain FED54_RS10740 PF03471 Transporter associated domain FED54_RS10740 PF01595 Cyclin M transmembrane N-terminal domain FED54_RS10745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_RS10745 PF03466 LysR substrate binding domain FED54_RS10750 PF00463 Isocitrate lyase family FED54_RS10765 PF01774 UreD urease accessory protein FED54_RS10770 PF00547 Urease, gamma subunit FED54_RS10775 PF00699 Urease beta subunit FED54_RS10780 PF01979 Amidohydrolase family FED54_RS10780 PF00449 Urease alpha-subunit, N-terminal domain FED54_RS10785 PF02814 UreE urease accessory protein, N-terminal domain FED54_RS10785 PF05194 UreE urease accessory protein, C-terminal domain FED54_RS10790 PF01730 UreF FED54_RS10795 PF02492 CobW/HypB/UreG, nucleotide-binding domain FED54_RS10810 PF00905 Penicillin binding protein transpeptidase domain FED54_RS10810 PF03717 Penicillin-binding Protein dimerisation domain FED54_RS10825 PF05191 Adenylate kinase, active site lid FED54_RS10835 PF10576 Iron-sulfur binding domain of endonuclease III FED54_RS10835 PF00730 HhH-GPD superfamily base excision DNA repair protein FED54_RS10835 PF00633 Helix-hairpin-helix motif FED54_RS10840 PF04060 Putative Fe-S cluster FED54_RS10845 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FED54_RS10845 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FED54_RS10855 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase FED54_RS10860 PF02590 Predicted SPOUT methyltransferase FED54_RS10865 PF00004 ATPase family associated with various cellular activities (AAA) FED54_RS10865 PF05362 Lon protease (S16) C-terminal proteolytic domain FED54_RS10865 PF02190 ATP-dependent protease La (LON) substrate-binding domain FED54_RS10875 PF01812 5-formyltetrahydrofolate cyclo-ligase family FED54_RS10915 PF00557 Metallopeptidase family M24 FED54_RS10915 PF05195 Aminopeptidase P, N-terminal domain FED54_RS10920 PF01494 FAD binding domain FED54_RS10925 PF01494 FAD binding domain FED54_RS10935 PF13411 MerR HTH family regulatory protein FED54_RS10945 PF01810 LysE type translocator FED54_RS10950 PF03466 LysR substrate binding domain FED54_RS10950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_RS10960 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FED54_RS10965 PF02021 Uncharacterised protein family UPF0102 FED54_RS10970 PF04972 BON domain FED54_RS10980 PF00293 NUDIX domain FED54_RS10980 PF09297 NADH pyrophosphatase zinc ribbon domain FED54_RS10990 PF00929 Exonuclease FED54_RS10995 PF01464 Transglycosylase SLT domain FED54_RS10995 PF01464 Transglycosylase SLT domain FED54_RS10995 PF01476 LysM domain FED54_RS10995 PF01476 LysM domain FED54_RS11000 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FED54_RS11005 PF00528 Binding-protein-dependent transport system inner membrane component FED54_RS11010 PF00528 Binding-protein-dependent transport system inner membrane component FED54_RS11010 PF12911 N-terminal TM domain of oligopeptide transport permease C FED54_RS11015 PF00005 ABC transporter FED54_RS11015 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FED54_RS11020 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FED54_RS11020 PF07992 Pyridine nucleotide-disulphide oxidoreductase FED54_RS11035 PF00593 TonB dependent receptor FED54_RS11035 PF07715 TonB-dependent Receptor Plug Domain FED54_RS11045 PF00929 Exonuclease FED54_RS11050 PF01979 Amidohydrolase family FED54_RS11055 PF00563 EAL domain FED54_RS11055 PF01590 GAF domain FED54_RS11055 PF00990 Diguanylate cyclase, GGDEF domain FED54_RS11055 PF00360 Phytochrome region FED54_RS11060 PF00764 Arginosuccinate synthase FED54_RS11070 PF07992 Pyridine nucleotide-disulphide oxidoreductase FED54_RS11070 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FED54_RS11080 PF03180 NLPA lipoprotein FED54_RS11095 PF00884 Sulfatase FED54_RS11100 PF03781 Sulfatase-modifying factor enzyme 1 FED54_RS11110 PF03466 LysR substrate binding domain FED54_RS11110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_RS11115 PF07690 Major Facilitator Superfamily FED54_RS11130 PF00171 Aldehyde dehydrogenase family FED54_RS11135 PF00465 Iron-containing alcohol dehydrogenase FED54_RS11140 PF04444 Catechol dioxygenase N terminus FED54_RS11140 PF00775 Dioxygenase FED54_RS11155 PF01144 Coenzyme A transferase FED54_RS11160 PF01144 Coenzyme A transferase FED54_RS11165 PF02803 Thiolase, C-terminal domain FED54_RS11165 PF00108 Thiolase, N-terminal domain FED54_RS11180 PF03783 Curli production assembly/transport component CsgG FED54_RS11190 PF05643 Putative bacterial lipoprotein (DUF799) FED54_RS11200 PF00324 Amino acid permease FED54_RS11205 PF01266 FAD dependent oxidoreductase FED54_RS11210 PF00324 Amino acid permease FED54_RS11220 PF07729 FCD domain FED54_RS11220 PF00392 Bacterial regulatory proteins, gntR family FED54_RS11230 PF00171 Aldehyde dehydrogenase family FED54_RS11240 PF00202 Aminotransferase class-III FED54_RS11245 PF04958 Arginine N-succinyltransferase beta subunit FED54_RS11250 PF00324 Amino acid permease FED54_RS11255 PF00171 Aldehyde dehydrogenase family FED54_RS11260 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term FED54_RS11260 PF12833 Helix-turn-helix domain FED54_RS11265 PF00892 EamA-like transporter family FED54_RS11270 PF08666 SAF domain FED54_RS11270 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus FED54_RS11275 PF07690 Major Facilitator Superfamily FED54_RS11280 PF13378 Enolase C-terminal domain-like FED54_RS11285 PF00701 Dihydrodipicolinate synthetase family FED54_RS11290 PF00171 Aldehyde dehydrogenase family FED54_RS11295 PF07729 FCD domain FED54_RS11295 PF00392 Bacterial regulatory proteins, gntR family FED54_RS11300 PF07519 Tannase and feruloyl esterase FED54_RS11315 PF03573 outer membrane porin, OprD family FED54_RS11320 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FED54_RS11320 PF02770 Acyl-CoA dehydrogenase, middle domain FED54_RS11320 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FED54_RS11330 PF00171 Aldehyde dehydrogenase family FED54_RS11335 PF00378 Enoyl-CoA hydratase/isomerase FED54_RS11340 PF07690 Major Facilitator Superfamily FED54_RS11355 PF00111 2Fe-2S iron-sulfur cluster binding domain FED54_RS11355 PF00175 Oxidoreductase NAD-binding domain FED54_RS11360 PF00355 Rieske [2Fe-2S] domain FED54_RS11370 PF03781 Sulfatase-modifying factor enzyme 1 FED54_RS11375 PF00884 Sulfatase FED54_RS11380 PF07690 Major Facilitator Superfamily FED54_RS11385 PF03573 outer membrane porin, OprD family FED54_RS11390 PF05199 GMC oxidoreductase FED54_RS11395 PF07859 alpha/beta hydrolase fold FED54_RS11400 PF00106 short chain dehydrogenase FED54_RS11405 PF00743 Flavin-binding monooxygenase-like FED54_RS11410 PF12833 Helix-turn-helix domain FED54_RS11415 PF04072 Leucine carboxyl methyltransferase FED54_RS11420 PF00743 Flavin-binding monooxygenase-like FED54_RS11425 PF00106 short chain dehydrogenase FED54_RS11435 PF00440 Bacterial regulatory proteins, tetR family FED54_RS11435 PF17932 Tetracyclin repressor-like, C-terminal domain FED54_RS11440 PF02678 Pirin FED54_RS11440 PF17954 Quercetinase C-terminal cupin domain FED54_RS11450 PF00106 short chain dehydrogenase FED54_RS11455 PF00743 Flavin-binding monooxygenase-like FED54_RS11465 PF00860 Permease family FED54_RS11470 PF00962 Adenosine/AMP deaminase FED54_RS11475 PF01292 Prokaryotic cytochrome b561 FED54_RS11485 PF01351 Ribonuclease HII FED54_RS11490 PF02599 Global regulator protein family FED54_RS11495 PF01842 ACT domain FED54_RS11495 PF13840 ACT domain FED54_RS11495 PF00696 Amino acid kinase family FED54_RS11500 PF02272 DHHA1 domain FED54_RS11500 PF01411 tRNA synthetases class II (A) FED54_RS11500 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FED54_RS11505 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FED54_RS11505 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FED54_RS11510 PF13393 Histidyl-tRNA synthetase FED54_RS11515 PF00709 Adenylosuccinate synthetase FED54_RS11530 PF00248 Aldo/keto reductase family FED54_RS11535 PF00027 Cyclic nucleotide-binding domain FED54_RS11535 PF13545 Crp-like helix-turn-helix domain FED54_RS11555 PF00004 ATPase family associated with various cellular activities (AAA) FED54_RS11555 PF07724 AAA domain (Cdc48 subfamily) FED54_RS11555 PF17871 AAA lid domain FED54_RS11555 PF02861 Clp amino terminal domain, pathogenicity island component FED54_RS11555 PF10431 C-terminal, D2-small domain, of ClpB protein FED54_RS11570 PF01170 Putative RNA methylase family UPF0020 FED54_RS11570 PF02926 THUMP domain FED54_RS11570 PF10672 S-adenosylmethionine-dependent methyltransferase FED54_RS11580 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FED54_RS11580 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FED54_RS11585 PF01979 Amidohydrolase family FED54_RS11590 PF00691 OmpA family FED54_RS11590 PF13488 Glycine zipper FED54_RS11600 PF13417 Glutathione S-transferase, N-terminal domain FED54_RS11600 PF00043 Glutathione S-transferase, C-terminal domain FED54_RS11605 PF02390 Putative methyltransferase FED54_RS11625 PF07992 Pyridine nucleotide-disulphide oxidoreductase FED54_RS11625 PF13192 Thioredoxin domain FED54_RS11645 PF10417 C-terminal domain of 1-Cys peroxiredoxin FED54_RS11645 PF00578 AhpC/TSA family FED54_RS11650 PF00271 Helicase conserved C-terminal domain FED54_RS11650 PF00270 DEAD/DEAH box helicase FED54_RS11650 PF11898 Domain of unknown function (DUF3418) FED54_RS11650 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold FED54_RS11650 PF04408 Helicase associated domain (HA2) FED54_RS11655 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FED54_RS11655 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FED54_RS11670 PF03594 Benzoate membrane transport protein FED54_RS11675 PF00106 short chain dehydrogenase FED54_RS11680 PF00970 Oxidoreductase FAD-binding domain FED54_RS11680 PF00175 Oxidoreductase NAD-binding domain FED54_RS11680 PF00111 2Fe-2S iron-sulfur cluster binding domain FED54_RS11685 PF00866 Ring hydroxylating beta subunit FED54_RS11690 PF00355 Rieske [2Fe-2S] domain FED54_RS11690 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FED54_RS11700 PF03466 LysR substrate binding domain FED54_RS11700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_RS11710 PF00970 Oxidoreductase FAD-binding domain FED54_RS11710 PF00111 2Fe-2S iron-sulfur cluster binding domain FED54_RS11710 PF00175 Oxidoreductase NAD-binding domain FED54_RS11720 PF04945 YHS domain FED54_RS11720 PF02332 Methane/Phenol/Toluene Hydroxylase FED54_RS11725 PF02406 MmoB/DmpM family FED54_RS11730 PF02332 Methane/Phenol/Toluene Hydroxylase FED54_RS11735 PF06099 Phenol hydroxylase subunit FED54_RS11740 PF02954 Bacterial regulatory protein, Fis family FED54_RS11740 PF06505 Activator of aromatic catabolism FED54_RS11740 PF02830 V4R domain FED54_RS11740 PF00158 Sigma-54 interaction domain FED54_RS11750 PF00403 Heavy-metal-associated domain FED54_RS11755 PF00376 MerR family regulatory protein FED54_RS11755 PF09278 MerR, DNA binding FED54_RS11795 PF13742 OB-fold nucleic acid binding domain FED54_RS11795 PF02601 Exonuclease VII, large subunit FED54_RS11830 PF01810 LysE type translocator FED54_RS11835 PF00313 'Cold-shock' DNA-binding domain FED54_RS11875 PF07690 Major Facilitator Superfamily FED54_RS11880 PF01638 HxlR-like helix-turn-helix FED54_RS11950 PF01555 DNA methylase FED54_RS11955 PF00717 Peptidase S24-like FED54_RS11955 PF01726 LexA DNA binding domain FED54_RS12050 PF06381 Protein of unknown function (DUF1073) FED54_RS12070 PF09979 Uncharacterized protein conserved in bacteria (DUF2213) FED54_RS12210 PF00589 Phage integrase family FED54_RS12220 PF01406 tRNA synthetases class I (C) catalytic domain FED54_RS12220 PF09190 DALR domain FED54_RS12225 PF01380 SIS domain FED54_RS12225 PF00571 CBS domain FED54_RS12240 PF03968 OstA-like protein FED54_RS12245 PF12399 Branched-chain amino acid ATP-binding cassette transporter FED54_RS12245 PF00005 ABC transporter FED54_RS12250 PF02321 Outer membrane efflux protein FED54_RS12255 PF00664 ABC transporter transmembrane region FED54_RS12255 PF00005 ABC transporter FED54_RS12255 PF03412 Peptidase C39 family FED54_RS12265 PF01205 Uncharacterized protein family UPF0029 FED54_RS12270 PF00132 Bacterial transferase hexapeptide (six repeats) FED54_RS12280 PF01596 O-methyltransferase FED54_RS12290 PF11953 Domain of unknown function (DUF3470) FED54_RS12290 PF00037 4Fe-4S binding domain FED54_RS12300 PF05188 MutS domain II FED54_RS12300 PF00488 MutS domain V FED54_RS12300 PF05190 MutS family domain IV FED54_RS12300 PF01624 MutS domain I FED54_RS12300 PF05192 MutS domain III FED54_RS12305 PF01037 Lrp/AsnC ligand binding domain FED54_RS12310 PF00892 EamA-like transporter family FED54_RS12315 PF03707 Bacterial signalling protein N terminal repeat FED54_RS12315 PF00563 EAL domain FED54_RS12315 PF00990 Diguanylate cyclase, GGDEF domain FED54_RS12320 PF03279 Bacterial lipid A biosynthesis acyltransferase FED54_RS12325 PF01544 CorA-like Mg2+ transporter protein FED54_RS12345 PF07690 Major Facilitator Superfamily FED54_RS12365 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FED54_RS12365 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FED54_RS12385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_RS12385 PF03466 LysR substrate binding domain FED54_RS12390 PF01566 Natural resistance-associated macrophage protein FED54_RS12395 PF03746 LamB/YcsF family FED54_RS12400 PF07286 Protein of unknown function (DUF1445) FED54_RS12410 PF02785 Biotin carboxylase C-terminal domain FED54_RS12410 PF00289 Biotin carboxylase, N-terminal domain FED54_RS12410 PF00364 Biotin-requiring enzyme FED54_RS12410 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FED54_RS12415 PF00654 Voltage gated chloride channel FED54_RS12420 PF08479 POTRA domain, ShlB-type FED54_RS12420 PF17287 POTRA domain FED54_RS12420 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB FED54_RS12425 PF13332 Hemagglutinin repeat FED54_RS12425 PF13018 Extended Signal Peptide of Type V secretion system FED54_RS12425 PF04829 Pre-toxin domain with VENN motif FED54_RS12425 PF05860 haemagglutination activity domain FED54_RS12440 PF00440 Bacterial regulatory proteins, tetR family FED54_RS12450 PF00107 Zinc-binding dehydrogenase FED54_RS12450 PF13823 Alcohol dehydrogenase GroES-associated FED54_RS12450 PF08240 Alcohol dehydrogenase GroES-like domain FED54_RS12465 PF00289 Biotin carboxylase, N-terminal domain FED54_RS12465 PF02785 Biotin carboxylase C-terminal domain FED54_RS12465 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FED54_RS12470 PF02525 Flavodoxin-like fold FED54_RS12475 PF01638 HxlR-like helix-turn-helix FED54_RS12485 PF08753 NikR C terminal nickel binding domain FED54_RS12485 PF01402 Ribbon-helix-helix protein, copG family FED54_RS12490 PF01425 Amidase FED54_RS12495 PF00497 Bacterial extracellular solute-binding proteins, family 3 FED54_RS12500 PF00005 ABC transporter FED54_RS12515 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) FED54_RS12515 PF13296 Putative type VI secretion system Rhs element Vgr FED54_RS12515 PF04717 Type VI secretion system, phage-baseplate injector FED54_RS12570 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath FED54_RS12585 PF05947 Type VI secretion system, TssF FED54_RS12600 PF06744 Type VI secretion protein IcmF C-terminal FED54_RS12600 PF06761 Intracellular multiplication and human macrophage-killing FED54_RS12600 PF14331 ImcF-related N-terminal domain FED54_RS12610 PF01389 OmpA-like transmembrane domain FED54_RS12610 PF00691 OmpA family FED54_RS12620 PF00004 ATPase family associated with various cellular activities (AAA) FED54_RS12620 PF10431 C-terminal, D2-small domain, of ClpB protein FED54_RS12620 PF17871 AAA lid domain FED54_RS12620 PF07724 AAA domain (Cdc48 subfamily) FED54_RS12625 PF06812 ImpA, N-terminal, type VI secretion system FED54_RS12630 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE FED54_RS12650 PF03466 LysR substrate binding domain FED54_RS12650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_RS12660 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FED54_RS12665 PF07690 Major Facilitator Superfamily FED54_RS12680 PF02677 Epoxyqueuosine reductase QueH FED54_RS12690 PF09278 MerR, DNA binding FED54_RS12690 PF00376 MerR family regulatory protein FED54_RS12705 PF00701 Dihydrodipicolinate synthetase family FED54_RS12725 PF00392 Bacterial regulatory proteins, gntR family FED54_RS12730 PF05544 Proline racemase FED54_RS12735 PF01266 FAD dependent oxidoreductase FED54_RS12745 PF04324 BFD-like [2Fe-2S] binding domain FED54_RS12745 PF07992 Pyridine nucleotide-disulphide oxidoreductase FED54_RS12755 PF00083 Sugar (and other) transporter FED54_RS12760 PF00171 Aldehyde dehydrogenase family FED54_RS12765 PF13520 Amino acid permease FED54_RS12770 PF03315 Serine dehydratase beta chain FED54_RS12770 PF03313 Serine dehydratase alpha chain FED54_RS12775 PF01575 MaoC like domain FED54_RS12775 PF00171 Aldehyde dehydrogenase family FED54_RS12780 PF05138 Phenylacetic acid catabolic protein FED54_RS12785 PF06243 Phenylacetic acid degradation B FED54_RS12790 PF05138 Phenylacetic acid catabolic protein FED54_RS12795 PF01883 Iron-sulfur cluster assembly protein FED54_RS12800 PF00970 Oxidoreductase FAD-binding domain FED54_RS12800 PF00111 2Fe-2S iron-sulfur cluster binding domain FED54_RS12800 PF00175 Oxidoreductase NAD-binding domain FED54_RS12805 PF00378 Enoyl-CoA hydratase/isomerase FED54_RS12810 PF00378 Enoyl-CoA hydratase/isomerase FED54_RS12815 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain FED54_RS12815 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FED54_RS12815 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FED54_RS12820 PF02803 Thiolase, C-terminal domain FED54_RS12820 PF00108 Thiolase, N-terminal domain FED54_RS12825 PF14535 AMP-binding enzyme C-terminal domain FED54_RS12825 PF00501 AMP-binding enzyme FED54_RS12830 PF08223 PaaX-like protein C-terminal domain FED54_RS12830 PF07848 PaaX-like protein FED54_RS12835 PF00132 Bacterial transferase hexapeptide (six repeats) FED54_RS12840 PF03061 Thioesterase superfamily FED54_RS12850 PF17757 UvrB interaction domain FED54_RS12850 PF12344 Ultra-violet resistance protein B FED54_RS12850 PF00271 Helicase conserved C-terminal domain FED54_RS12850 PF04851 Type III restriction enzyme, res subunit FED54_RS12850 PF02151 UvrB/uvrC motif FED54_RS12870 PF12833 Helix-turn-helix domain FED54_RS12870 PF06719 AraC-type transcriptional regulator N-terminus FED54_RS12885 PF02515 CoA-transferase family III FED54_RS12890 PF00682 HMGL-like FED54_RS12895 PF07690 Major Facilitator Superfamily FED54_RS12900 PF00199 Catalase FED54_RS12905 PF01292 Prokaryotic cytochrome b561 FED54_RS12925 PF12697 Alpha/beta hydrolase family FED54_RS12930 PF01613 Flavin reductase like domain FED54_RS12935 PF00296 Luciferase-like monooxygenase FED54_RS12940 PF00171 Aldehyde dehydrogenase family FED54_RS12950 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin FED54_RS12960 PF00171 Aldehyde dehydrogenase family FED54_RS12965 PF02627 Carboxymuconolactone decarboxylase family FED54_RS12970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_RS12970 PF03466 LysR substrate binding domain FED54_RS12975 PF02525 Flavodoxin-like fold FED54_RS12980 PF01614 Bacterial transcriptional regulator FED54_RS12980 PF09339 IclR helix-turn-helix domain FED54_RS12985 PF01494 FAD binding domain FED54_RS12990 PF00392 Bacterial regulatory proteins, gntR family FED54_RS12990 PF07702 UTRA domain FED54_RS13000 PF00005 ABC transporter FED54_RS13000 PF08402 TOBE domain FED54_RS13005 PF00528 Binding-protein-dependent transport system inner membrane component FED54_RS13010 PF01266 FAD dependent oxidoreductase FED54_RS13015 PF00266 Aminotransferase class-V FED54_RS13020 PF13419 Haloacid dehalogenase-like hydrolase FED54_RS13025 PF07690 Major Facilitator Superfamily FED54_RS13030 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FED54_RS13030 PF02770 Acyl-CoA dehydrogenase, middle domain FED54_RS13030 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FED54_RS13035 PF02515 CoA-transferase family III FED54_RS13040 PF09339 IclR helix-turn-helix domain FED54_RS13045 PF00378 Enoyl-CoA hydratase/isomerase FED54_RS13050 PF03060 Nitronate monooxygenase FED54_RS13055 PF07690 Major Facilitator Superfamily FED54_RS13060 PF09339 IclR helix-turn-helix domain FED54_RS13065 PF00108 Thiolase, N-terminal domain FED54_RS13065 PF02803 Thiolase, C-terminal domain FED54_RS13070 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain FED54_RS13070 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FED54_RS13070 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FED54_RS13080 PF00378 Enoyl-CoA hydratase/isomerase FED54_RS13085 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FED54_RS13085 PF02770 Acyl-CoA dehydrogenase, middle domain FED54_RS13085 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FED54_RS13095 PF01144 Coenzyme A transferase FED54_RS13100 PF01144 Coenzyme A transferase FED54_RS13110 PF07690 Major Facilitator Superfamily FED54_RS13120 PF12806 Acetyl-CoA dehydrogenase C-terminal like FED54_RS13120 PF02770 Acyl-CoA dehydrogenase, middle domain FED54_RS13120 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FED54_RS13120 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FED54_RS13135 PF03466 LysR substrate binding domain FED54_RS13135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_RS13140 PF00682 HMGL-like FED54_RS13145 PF00364 Biotin-requiring enzyme FED54_RS13145 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FED54_RS13145 PF18140 Propionyl-coenzyme A carboxylase BT domain FED54_RS13145 PF02785 Biotin carboxylase C-terminal domain FED54_RS13145 PF00289 Biotin carboxylase, N-terminal domain FED54_RS13150 PF00378 Enoyl-CoA hydratase/isomerase FED54_RS13155 PF01039 Carboxyl transferase domain FED54_RS13160 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FED54_RS13160 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FED54_RS13160 PF02770 Acyl-CoA dehydrogenase, middle domain FED54_RS13165 PF00440 Bacterial regulatory proteins, tetR family FED54_RS13170 PF13193 AMP-binding enzyme C-terminal domain FED54_RS13170 PF00501 AMP-binding enzyme FED54_RS13190 PF03466 LysR substrate binding domain FED54_RS13190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_RS13220 PF18146 Damage-inducible protein CinA KH domain FED54_RS13220 PF02464 Competence-damaged protein FED54_RS13220 PF00994 Probable molybdopterin binding domain FED54_RS13230 PF00199 Catalase FED54_RS13230 PF18011 C-terminal domain found in long catalases FED54_RS13230 PF06628 Catalase-related immune-responsive FED54_RS13255 PF00717 Peptidase S24-like FED54_RS13265 PF13404 AsnC-type helix-turn-helix domain FED54_RS13265 PF01037 Lrp/AsnC ligand binding domain FED54_RS13275 PF09308 LuxQ, periplasmic FED54_RS13275 PF00512 His Kinase A (phospho-acceptor) domain FED54_RS13275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED54_RS13275 PF00072 Response regulator receiver domain FED54_RS13280 PF00072 Response regulator receiver domain FED54_RS13285 PF02129 X-Pro dipeptidyl-peptidase (S15 family) FED54_RS13295 PF03466 LysR substrate binding domain FED54_RS13295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_RS13300 PF07690 Major Facilitator Superfamily FED54_RS13315 PF00528 Binding-protein-dependent transport system inner membrane component FED54_RS13320 PF00528 Binding-protein-dependent transport system inner membrane component FED54_RS13325 PF00005 ABC transporter FED54_RS13330 PF00497 Bacterial extracellular solute-binding proteins, family 3 FED54_RS13335 PF00497 Bacterial extracellular solute-binding proteins, family 3 FED54_RS13345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_RS13345 PF03466 LysR substrate binding domain FED54_RS13350 PF01810 LysE type translocator FED54_RS13355 PF00266 Aminotransferase class-V FED54_RS13365 PF00132 Bacterial transferase hexapeptide (six repeats) FED54_RS13370 PF00581 Rhodanese-like domain FED54_RS13380 PF03466 LysR substrate binding domain FED54_RS13380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_RS13385 PF02798 Glutathione S-transferase, N-terminal domain FED54_RS13390 PF14834 Glutathione S-transferase, C-terminal domain FED54_RS13390 PF02798 Glutathione S-transferase, N-terminal domain FED54_RS13395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_RS13395 PF03466 LysR substrate binding domain FED54_RS13400 PF03788 LrgA family FED54_RS13405 PF04172 LrgB-like family FED54_RS13410 PF00155 Aminotransferase class I and II FED54_RS13410 PF00392 Bacterial regulatory proteins, gntR family FED54_RS13430 PF00106 short chain dehydrogenase FED54_RS13435 PF16957 Malonate decarboxylase, alpha subunit, transporter FED54_RS13440 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase FED54_RS13445 PF06857 Malonate decarboxylase delta subunit (MdcD) FED54_RS13450 PF01039 Carboxyl transferase domain FED54_RS13460 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG FED54_RS13465 PF00698 Acyl transferase domain FED54_RS13480 PF03466 LysR substrate binding domain FED54_RS13480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_RS13485 PF00155 Aminotransferase class I and II FED54_RS13485 PF00392 Bacterial regulatory proteins, gntR family FED54_RS13495 PF02322 Cytochrome bd terminal oxidase subunit II FED54_RS13500 PF01654 Cytochrome bd terminal oxidase subunit I FED54_RS13525 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FED54_RS13525 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FED54_RS13525 PF02770 Acyl-CoA dehydrogenase, middle domain FED54_RS13530 PF00296 Luciferase-like monooxygenase FED54_RS13535 PF00083 Sugar (and other) transporter FED54_RS13545 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FED54_RS13550 PF00005 ABC transporter FED54_RS13555 PF00528 Binding-protein-dependent transport system inner membrane component FED54_RS13560 PF02668 Taurine catabolism dioxygenase TauD, TfdA family FED54_RS13565 PF01177 Asp/Glu/Hydantoin racemase FED54_RS13570 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin FED54_RS13590 PF01979 Amidohydrolase family FED54_RS13590 PF13382 Adenine deaminase C-terminal domain FED54_RS13600 PF03960 ArsC family FED54_RS13605 PF01022 Bacterial regulatory protein, arsR family FED54_RS13610 PF01758 Sodium Bile acid symporter family FED54_RS13615 PF03466 LysR substrate binding domain FED54_RS13615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_RS13630 PF13192 Thioredoxin domain FED54_RS13630 PF07992 Pyridine nucleotide-disulphide oxidoreductase FED54_RS13645 PF00132 Bacterial transferase hexapeptide (six repeats) FED54_RS13650 PF00588 SpoU rRNA Methylase family FED54_RS13655 PF01336 OB-fold nucleic acid binding domain FED54_RS13655 PF07733 Bacterial DNA polymerase III alpha NTPase domain FED54_RS13655 PF02811 PHP domain FED54_RS13655 PF14579 Helix-hairpin-helix motif FED54_RS13655 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FED54_RS13660 PF00710 Asparaginase, N-terminal FED54_RS13660 PF17763 Glutaminase/Asparaginase C-terminal domain FED54_RS13665 PF00375 Sodium:dicarboxylate symporter family FED54_RS13670 PF00155 Aminotransferase class I and II FED54_RS13675 PF01641 SelR domain FED54_RS13680 PF00255 Glutathione peroxidase FED54_RS13685 PF12833 Helix-turn-helix domain FED54_RS13685 PF12852 Cupin FED54_RS13695 PF00155 Aminotransferase class I and II FED54_RS13700 PF01966 HD domain FED54_RS13700 PF08335 GlnD PII-uridylyltransferase FED54_RS13700 PF01909 Nucleotidyltransferase domain FED54_RS13705 PF02222 ATP-grasp domain FED54_RS13715 PF05437 Branched-chain amino acid transport protein (AzlD) FED54_RS13720 PF03591 AzlC protein FED54_RS13745 PF01926 50S ribosome-binding GTPase FED54_RS13745 PF06071 Protein of unknown function (DUF933) FED54_RS13750 PF00528 Binding-protein-dependent transport system inner membrane component FED54_RS13755 PF00005 ABC transporter FED54_RS13755 PF09383 NIL domain FED54_RS13760 PF03180 NLPA lipoprotein FED54_RS13765 PF03180 NLPA lipoprotein FED54_RS13770 PF00296 Luciferase-like monooxygenase FED54_RS13780 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FED54_RS13780 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FED54_RS13795 PF00528 Binding-protein-dependent transport system inner membrane component FED54_RS13800 PF00528 Binding-protein-dependent transport system inner membrane component FED54_RS13805 PF00005 ABC transporter FED54_RS13815 PF01037 Lrp/AsnC ligand binding domain FED54_RS13820 PF01709 Transcriptional regulator FED54_RS13830 PF00440 Bacterial regulatory proteins, tetR family FED54_RS13855 PF03466 LysR substrate binding domain FED54_RS13855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_RS13870 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin FED54_RS13880 PF00892 EamA-like transporter family FED54_RS13905 PF00577 Outer membrane usher protein FED54_RS13905 PF13954 PapC N-terminal domain FED54_RS13905 PF13953 PapC C-terminal domain FED54_RS13910 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FED54_RS13910 PF02753 Pili assembly chaperone PapD, C-terminal domain FED54_RS13915 PF16970 Type-1 fimbrial protein, A FED54_RS13930 PF06968 Biotin and Thiamin Synthesis associated domain FED54_RS13930 PF04055 Radical SAM superfamily FED54_RS13935 PF08331 Domain of unknown function (DUF1730) FED54_RS13940 PF01256 Carbohydrate kinase FED54_RS13940 PF03853 YjeF-related protein N-terminus FED54_RS13945 PF02075 Crossover junction endodeoxyribonuclease RuvC FED54_RS13960 PF00905 Penicillin binding protein transpeptidase domain FED54_RS13980 PF02772 S-adenosylmethionine synthetase, central domain FED54_RS13980 PF00438 S-adenosylmethionine synthetase, N-terminal domain FED54_RS13980 PF02773 S-adenosylmethionine synthetase, C-terminal domain FED54_RS13985 PF02780 Transketolase, C-terminal domain FED54_RS13985 PF00456 Transketolase, thiamine diphosphate binding domain FED54_RS13985 PF02779 Transketolase, pyrimidine binding domain FED54_RS13995 PF04264 YceI-like domain FED54_RS14005 PF09992 Phosphodiester glycosidase FED54_RS14015 PF05958 tRNA (Uracil-5-)-methyltransferase FED54_RS14020 PF04229 GrpB protein FED54_RS14025 PF18327 Proline utilization A proline dehydrogenase N-terminal domain FED54_RS14025 PF14850 DNA-binding domain of Proline dehydrogenase FED54_RS14025 PF01619 Proline dehydrogenase FED54_RS14025 PF00171 Aldehyde dehydrogenase family FED54_RS14030 PF01037 Lrp/AsnC ligand binding domain FED54_RS14035 PF00474 Sodium:solute symporter family FED54_RS14040 PF02146 Sir2 family FED54_RS14045 PF01597 Glycine cleavage H-protein FED54_RS14050 PF12833 Helix-turn-helix domain FED54_RS14050 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term FED54_RS14060 PF00005 ABC transporter FED54_RS14060 PF00664 ABC transporter transmembrane region FED54_RS14065 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) FED54_RS14070 PF06912 Protein of unknown function (DUF1275) FED54_RS14075 PF00375 Sodium:dicarboxylate symporter family FED54_RS14090 PF08007 Cupin superfamily protein FED54_RS14095 PF02545 Maf-like protein FED54_RS14105 PF00162 Phosphoglycerate kinase FED54_RS14115 PF01116 Fructose-bisphosphate aldolase class-II FED54_RS14120 PF09312 SurA N-terminal domain FED54_RS14120 PF00639 PPIC-type PPIASE domain FED54_RS14125 PF04453 LPS transport system D FED54_RS14125 PF03968 OstA-like protein FED54_RS14130 PF01636 Phosphotransferase enzyme family FED54_RS14135 PF00483 Nucleotidyl transferase FED54_RS14140 PF02527 rRNA small subunit methyltransferase G FED54_RS14145 PF13614 AAA domain FED54_RS14150 PF02195 ParB-like nuclease domain FED54_RS14150 PF17762 HTH domain found in ParB protein FED54_RS14155 PF01618 MotA/TolQ/ExbB proton channel family FED54_RS14165 PF00005 ABC transporter FED54_RS14165 PF00664 ABC transporter transmembrane region FED54_RS14170 PF02606 Tetraacyldisaccharide-1-P 4'-kinase FED54_RS14175 PF02348 Cytidylyltransferase FED54_RS14180 PF09115 DNA polymerase III, delta subunit, C terminal FED54_RS14190 PF01026 TatD related DNase FED54_RS14205 PF02501 Type II secretion system (T2SS), protein I FED54_RS14205 PF07963 Prokaryotic N-terminal methylation motif FED54_RS14210 PF11612 Type II secretion system (T2SS), protein J FED54_RS14210 PF07963 Prokaryotic N-terminal methylation motif FED54_RS14225 PF03167 Uracil DNA glycosylase superfamily FED54_RS14235 PF14437 MafB19-like deaminase FED54_RS14245 PF02224 Cytidylate kinase FED54_RS14250 PF00575 S1 RNA binding domain FED54_RS14255 PF00216 Bacterial DNA-binding protein FED54_RS14265 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FED54_RS14275 PF00743 Flavin-binding monooxygenase-like FED54_RS14285 PF03969 AFG1-like ATPase FED54_RS14290 PF01274 Malate synthase FED54_RS14300 PF02472 Biopolymer transport protein ExbD/TolR FED54_RS14305 PF02472 Biopolymer transport protein ExbD/TolR FED54_RS14310 PF01618 MotA/TolQ/ExbB proton channel family FED54_RS14320 PF00593 TonB dependent receptor FED54_RS14320 PF07715 TonB-dependent Receptor Plug Domain FED54_RS14330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FED54_RS14340 PF01432 Peptidase family M3 FED54_RS14345 PF00528 Binding-protein-dependent transport system inner membrane component FED54_RS14350 PF00528 Binding-protein-dependent transport system inner membrane component FED54_RS14355 PF00005 ABC transporter FED54_RS14355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FED54_RS14370 PF00459 Inositol monophosphatase family FED54_RS14380 PF01649 Ribosomal protein S20 FED54_RS14385 PF13460 NAD(P)H-binding FED54_RS14390 PF03737 Aldolase/RraA FED54_RS14410 PF02559 CarD-like/TRCF domain FED54_RS14410 PF17757 UvrB interaction domain FED54_RS14410 PF00270 DEAD/DEAH box helicase FED54_RS14410 PF00271 Helicase conserved C-terminal domain FED54_RS14410 PF03461 TRCF domain FED54_RS14420 PF00211 Adenylate and Guanylate cyclase catalytic domain FED54_RS14425 PF00111 2Fe-2S iron-sulfur cluster binding domain FED54_RS14430 PF00012 Hsp70 protein FED54_RS14435 PF07743 HSCB C-terminal oligomerisation domain FED54_RS14435 PF00226 DnaJ domain FED54_RS14440 PF01521 Iron-sulphur cluster biosynthesis FED54_RS14445 PF01592 NifU-like N terminal domain FED54_RS14450 PF00266 Aminotransferase class-V FED54_RS14455 PF02082 Transcriptional regulator FED54_RS14470 PF00216 Bacterial DNA-binding protein FED54_RS14475 PF09312 SurA N-terminal domain FED54_RS14475 PF00639 PPIC-type PPIASE domain FED54_RS14480 PF12833 Helix-turn-helix domain FED54_RS14480 PF12852 Cupin FED54_RS14485 PF00487 Fatty acid desaturase FED54_RS14490 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FED54_RS14490 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FED54_RS14490 PF02770 Acyl-CoA dehydrogenase, middle domain FED54_RS14495 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FED54_RS14495 PF02770 Acyl-CoA dehydrogenase, middle domain FED54_RS14495 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FED54_RS14500 PF03109 ABC1 family FED54_RS14510 PF04073 Aminoacyl-tRNA editing domain FED54_RS14515 PF04183 IucA / IucC family FED54_RS14515 PF06276 Ferric iron reductase FhuF-like transporter FED54_RS14520 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) FED54_RS14525 PF07690 Major Facilitator Superfamily FED54_RS14530 PF06276 Ferric iron reductase FhuF-like transporter FED54_RS14530 PF04183 IucA / IucC family FED54_RS14535 PF04183 IucA / IucC family FED54_RS14535 PF06276 Ferric iron reductase FhuF-like transporter FED54_RS14545 PF03737 Aldolase/RraA FED54_RS14550 PF00593 TonB dependent receptor FED54_RS14550 PF07715 TonB-dependent Receptor Plug Domain FED54_RS14590 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase FED54_RS14595 PF02277 Phosphoribosyltransferase FED54_RS14600 PF00300 Histidine phosphatase superfamily (branch 1) FED54_RS14610 PF02654 Cobalamin-5-phosphate synthase FED54_RS14615 PF00793 DAHP synthetase I family FED54_RS14625 PF01925 Sulfite exporter TauE/SafE FED54_RS14650 PF02684 Lipid-A-disaccharide synthetase FED54_RS14660 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FED54_RS14665 PF00005 ABC transporter FED54_RS14700 PF01230 HIT domain FED54_RS14730 PF08241 Methyltransferase domain FED54_RS14735 PF00561 alpha/beta hydrolase fold FED54_RS14740 PF01053 Cys/Met metabolism PLP-dependent enzyme FED54_RS14755 PF02575 YbaB/EbfC DNA-binding family FED54_RS14760 PF02132 RecR protein FED54_RS14760 PF13662 Toprim domain FED54_RS14785 PF05166 YcgL domain FED54_RS14795 PF01434 Peptidase family M41 FED54_RS14795 PF00004 ATPase family associated with various cellular activities (AAA) FED54_RS14795 PF17862 AAA+ lid domain FED54_RS14805 PF00291 Pyridoxal-phosphate dependent enzyme FED54_RS14810 PF05175 Methyltransferase small domain FED54_RS14815 PF01264 Chorismate synthase FED54_RS14820 PF08448 PAS fold FED54_RS14820 PF00990 Diguanylate cyclase, GGDEF domain FED54_RS14835 PF04055 Radical SAM superfamily FED54_RS14840 PF00676 Dehydrogenase E1 component FED54_RS14845 PF02780 Transketolase, C-terminal domain FED54_RS14845 PF02779 Transketolase, pyrimidine binding domain FED54_RS14850 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FED54_RS14850 PF02817 e3 binding domain FED54_RS14850 PF00364 Biotin-requiring enzyme FED54_RS14855 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FED54_RS14855 PF07992 Pyridine nucleotide-disulphide oxidoreductase FED54_RS14860 PF00106 short chain dehydrogenase FED54_RS14865 PF00107 Zinc-binding dehydrogenase FED54_RS14865 PF08240 Alcohol dehydrogenase GroES-like domain FED54_RS14870 PF01062 Bestrophin, RFP-TM, chloride channel FED54_RS14875 PF00158 Sigma-54 interaction domain FED54_RS14875 PF00072 Response regulator receiver domain FED54_RS14875 PF02954 Bacterial regulatory protein, Fis family FED54_RS14880 PF00753 Metallo-beta-lactamase superfamily FED54_RS14880 PF04273 Putative phosphatase (DUF442) FED54_RS14885 PF04273 Putative phosphatase (DUF442) FED54_RS14885 PF00753 Metallo-beta-lactamase superfamily FED54_RS14890 PF01925 Sulfite exporter TauE/SafE FED54_RS14905 PF06445 GyrI-like small molecule binding domain FED54_RS14905 PF12833 Helix-turn-helix domain FED54_RS14910 PF01638 HxlR-like helix-turn-helix FED54_RS14915 PF02525 Flavodoxin-like fold FED54_RS14925 PF00392 Bacterial regulatory proteins, gntR family FED54_RS14925 PF07702 UTRA domain FED54_RS14945 PF00528 Binding-protein-dependent transport system inner membrane component FED54_RS14950 PF00005 ABC transporter FED54_RS14965 PF00083 Sugar (and other) transporter FED54_RS14970 PF00593 TonB dependent receptor FED54_RS14970 PF07715 TonB-dependent Receptor Plug Domain FED54_RS14975 PF10415 Fumarase C C-terminus FED54_RS14975 PF00206 Lyase FED54_RS14990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_RS14990 PF03466 LysR substrate binding domain FED54_RS14995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_RS14995 PF03466 LysR substrate binding domain FED54_RS15000 PF02803 Thiolase, C-terminal domain FED54_RS15000 PF00108 Thiolase, N-terminal domain FED54_RS15005 PF02667 Short chain fatty acid transporter FED54_RS15010 PF01144 Coenzyme A transferase FED54_RS15015 PF01144 Coenzyme A transferase FED54_RS15020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_RS15020 PF03466 LysR substrate binding domain FED54_RS15040 PF00440 Bacterial regulatory proteins, tetR family FED54_RS15060 PF12833 Helix-turn-helix domain FED54_RS15060 PF06719 AraC-type transcriptional regulator N-terminus FED54_RS15065 PF07690 Major Facilitator Superfamily FED54_RS15070 PF01738 Dienelactone hydrolase family FED54_RS15085 PF01613 Flavin reductase like domain FED54_RS15100 PF00970 Oxidoreductase FAD-binding domain FED54_RS15100 PF00111 2Fe-2S iron-sulfur cluster binding domain FED54_RS15100 PF00175 Oxidoreductase NAD-binding domain FED54_RS15105 PF00866 Ring hydroxylating beta subunit FED54_RS15110 PF00355 Rieske [2Fe-2S] domain FED54_RS15110 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FED54_RS15115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_RS15115 PF03459 TOBE domain FED54_RS15125 PF00528 Binding-protein-dependent transport system inner membrane component FED54_RS15130 PF03459 TOBE domain FED54_RS15130 PF00005 ABC transporter FED54_RS15135 PF00106 short chain dehydrogenase FED54_RS15140 PF00550 Phosphopantetheine attachment site FED54_RS15140 PF00857 Isochorismatase family FED54_RS15150 PF00149 Calcineurin-like phosphoesterase FED54_RS15155 PF02503 Polyphosphate kinase middle domain FED54_RS15155 PF13090 Polyphosphate kinase C-terminal domain 2 FED54_RS15155 PF17941 Polyphosphate kinase C-terminal domain 1 FED54_RS15155 PF13089 Polyphosphate kinase N-terminal domain FED54_RS15160 PF08042 PqqA family FED54_RS15165 PF12706 Beta-lactamase superfamily domain FED54_RS15170 PF03070 TENA/THI-4/PQQC family FED54_RS15175 PF05402 Coenzyme PQQ synthesis protein D (PqqD) FED54_RS15180 PF13186 Iron-sulfur cluster-binding domain FED54_RS15180 PF04055 Radical SAM superfamily FED54_RS15185 PF01244 Membrane dipeptidase (Peptidase family M19) FED54_RS15205 PF13091 PLD-like domain FED54_RS15220 PF00199 Catalase FED54_RS15235 PF00107 Zinc-binding dehydrogenase FED54_RS15235 PF08240 Alcohol dehydrogenase GroES-like domain FED54_RS15250 PF00419 Fimbrial protein FED54_RS15255 PF00577 Outer membrane usher protein FED54_RS15255 PF13953 PapC C-terminal domain FED54_RS15255 PF13954 PapC N-terminal domain FED54_RS15260 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FED54_RS15260 PF02753 Pili assembly chaperone PapD, C-terminal domain FED54_RS15265 PF16970 Type-1 fimbrial protein, A FED54_RS15285 PF00296 Luciferase-like monooxygenase FED54_RS15290 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FED54_RS15295 PF00528 Binding-protein-dependent transport system inner membrane component FED54_RS15300 PF12911 N-terminal TM domain of oligopeptide transport permease C FED54_RS15300 PF00528 Binding-protein-dependent transport system inner membrane component FED54_RS15305 PF00005 ABC transporter FED54_RS15305 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FED54_RS15310 PF02770 Acyl-CoA dehydrogenase, middle domain FED54_RS15310 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FED54_RS15310 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FED54_RS15320 PF00005 ABC transporter FED54_RS15320 PF00664 ABC transporter transmembrane region FED54_RS15325 PF00005 ABC transporter FED54_RS15325 PF00664 ABC transporter transmembrane region FED54_RS15335 PF00593 TonB dependent receptor FED54_RS15335 PF07715 TonB-dependent Receptor Plug Domain FED54_RS15345 PF00296 Luciferase-like monooxygenase FED54_RS15350 PF00158 Sigma-54 interaction domain FED54_RS15355 PF00902 Sec-independent protein translocase protein (TatC) FED54_RS15360 PF02416 mttA/Hcf106 family FED54_RS15365 PF02416 mttA/Hcf106 family FED54_RS15370 PF00005 ABC transporter FED54_RS15375 PF00528 Binding-protein-dependent transport system inner membrane component FED54_RS15380 PF00528 Binding-protein-dependent transport system inner membrane component FED54_RS15385 PF09084 NMT1/THI5 like FED54_RS15390 PF00296 Luciferase-like monooxygenase FED54_RS15395 PF03544 Gram-negative bacterial TonB protein C-terminal FED54_RS15400 PF01618 MotA/TolQ/ExbB proton channel family FED54_RS15405 PF02472 Biopolymer transport protein ExbD/TolR FED54_RS15410 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FED54_RS15420 PF00593 TonB dependent receptor FED54_RS15420 PF07715 TonB-dependent Receptor Plug Domain FED54_RS15425 PF00296 Luciferase-like monooxygenase FED54_RS15435 PF00005 ABC transporter FED54_RS15435 PF17755 UvrA DNA-binding domain FED54_RS15435 PF17760 UvrA interaction domain FED54_RS15440 PF00873 AcrB/AcrD/AcrF family FED54_RS15445 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FED54_RS15445 PF00529 HlyD membrane-fusion protein of T1SS FED54_RS15450 PF00072 Response regulator receiver domain FED54_RS15450 PF00486 Transcriptional regulatory protein, C terminal FED54_RS15455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED54_RS15455 PF00672 HAMP domain FED54_RS15455 PF00512 His Kinase A (phospho-acceptor) domain FED54_RS15455 PF16527 Two-component sensor protein CpxA, periplasmic domain FED54_RS15465 PF12833 Helix-turn-helix domain FED54_RS15465 PF02311 AraC-like ligand binding domain FED54_RS15470 PF12146 Serine aminopeptidase, S33 FED54_RS15505 PF04607 Region found in RelA / SpoT proteins FED54_RS15505 PF13291 ACT domain FED54_RS15505 PF02824 TGS domain FED54_RS15515 PF01975 Survival protein SurE FED54_RS15540 PF07690 Major Facilitator Superfamily FED54_RS15545 PF13533 Biotin-lipoyl like FED54_RS15560 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FED54_RS15565 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FED54_RS15565 PF14572 Phosphoribosyl synthetase-associated domain FED54_RS15585 PF00005 ABC transporter FED54_RS15590 PF01032 FecCD transport family FED54_RS15600 PF00107 Zinc-binding dehydrogenase FED54_RS15600 PF08240 Alcohol dehydrogenase GroES-like domain FED54_RS15615 PF06719 AraC-type transcriptional regulator N-terminus FED54_RS15615 PF12833 Helix-turn-helix domain FED54_RS15620 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FED54_RS15620 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FED54_RS15625 PF07690 Major Facilitator Superfamily FED54_RS15630 PF01370 NAD dependent epimerase/dehydratase family FED54_RS15635 PF03466 LysR substrate binding domain FED54_RS15635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_RS15645 PF00920 Dehydratase family FED54_RS15650 PF00171 Aldehyde dehydrogenase family FED54_RS15665 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FED54_RS15665 PF00529 HlyD membrane-fusion protein of T1SS FED54_RS15675 PF07690 Major Facilitator Superfamily FED54_RS15680 PF01557 Fumarylacetoacetate (FAA) hydrolase family FED54_RS15685 PF13417 Glutathione S-transferase, N-terminal domain FED54_RS15690 PF01494 FAD binding domain FED54_RS15695 PF07883 Cupin domain FED54_RS15700 PF03466 LysR substrate binding domain FED54_RS15700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_RS15715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_RS15715 PF03466 LysR substrate binding domain FED54_RS15725 PF08450 SMP-30/Gluconolactonase/LRE-like region FED54_RS15730 PF00392 Bacterial regulatory proteins, gntR family FED54_RS15730 PF07702 UTRA domain FED54_RS15740 PF04909 Amidohydrolase FED54_RS15745 PF07690 Major Facilitator Superfamily FED54_RS15775 PF13360 PQQ-like domain FED54_RS15780 PF01638 HxlR-like helix-turn-helix FED54_RS15790 PF02798 Glutathione S-transferase, N-terminal domain FED54_RS15790 PF00043 Glutathione S-transferase, C-terminal domain FED54_RS15795 PF07681 DoxX FED54_RS15800 PF02525 Flavodoxin-like fold FED54_RS15805 PF03466 LysR substrate binding domain FED54_RS15805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_RS15820 PF07690 Major Facilitator Superfamily FED54_RS15850 PF00440 Bacterial regulatory proteins, tetR family FED54_RS15850 PF08359 YsiA-like protein, C-terminal region FED54_RS15855 PF12706 Beta-lactamase superfamily domain FED54_RS15865 PF07992 Pyridine nucleotide-disulphide oxidoreductase FED54_RS15875 PF09278 MerR, DNA binding FED54_RS15875 PF00376 MerR family regulatory protein FED54_RS15880 PF01872 RibD C-terminal domain FED54_RS15885 PF00106 short chain dehydrogenase FED54_RS15890 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FED54_RS15890 PF07992 Pyridine nucleotide-disulphide oxidoreductase FED54_RS15895 PF01047 MarR family FED54_RS15900 PF07859 alpha/beta hydrolase fold FED54_RS15930 PF00199 Catalase FED54_RS15930 PF06628 Catalase-related immune-responsive FED54_RS15935 PF00561 alpha/beta hydrolase fold FED54_RS15945 PF00171 Aldehyde dehydrogenase family FED54_RS15950 PF08240 Alcohol dehydrogenase GroES-like domain FED54_RS15950 PF00107 Zinc-binding dehydrogenase FED54_RS15955 PF00474 Sodium:solute symporter family FED54_RS15960 PF04341 Protein of unknown function, DUF485 FED54_RS15965 PF00501 AMP-binding enzyme FED54_RS15965 PF13193 AMP-binding enzyme C-terminal domain FED54_RS15975 PF02954 Bacterial regulatory protein, Fis family FED54_RS15975 PF06506 Propionate catabolism activator FED54_RS15975 PF00158 Sigma-54 interaction domain FED54_RS15985 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FED54_RS15985 PF02770 Acyl-CoA dehydrogenase, middle domain FED54_RS15985 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FED54_RS16000 PF01636 Phosphotransferase enzyme family FED54_RS16005 PF00171 Aldehyde dehydrogenase family FED54_RS16015 PF07690 Major Facilitator Superfamily FED54_RS16020 PF00920 Dehydratase family FED54_RS16025 PF07729 FCD domain FED54_RS16025 PF00392 Bacterial regulatory proteins, gntR family FED54_RS16035 PF03466 LysR substrate binding domain FED54_RS16035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_RS16040 PF13378 Enolase C-terminal domain-like FED54_RS16040 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FED54_RS16045 PF02426 Muconolactone delta-isomerase FED54_RS16050 PF04444 Catechol dioxygenase N terminus FED54_RS16050 PF00775 Dioxygenase FED54_RS16055 PF01144 Coenzyme A transferase FED54_RS16060 PF01144 Coenzyme A transferase FED54_RS16065 PF00108 Thiolase, N-terminal domain FED54_RS16065 PF02803 Thiolase, C-terminal domain FED54_RS16070 PF12146 Serine aminopeptidase, S33 FED54_RS16075 PF00171 Aldehyde dehydrogenase family FED54_RS16085 PF07833 Copper amine oxidase N-terminal domain FED54_RS16085 PF02728 Copper amine oxidase, N3 domain FED54_RS16085 PF02727 Copper amine oxidase, N2 domain FED54_RS16085 PF01179 Copper amine oxidase, enzyme domain FED54_RS16090 PF12833 Helix-turn-helix domain FED54_RS16090 PF02311 AraC-like ligand binding domain FED54_RS16095 PF01613 Flavin reductase like domain FED54_RS16100 PF00175 Oxidoreductase NAD-binding domain FED54_RS16100 PF00111 2Fe-2S iron-sulfur cluster binding domain FED54_RS16115 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FED54_RS16115 PF00355 Rieske [2Fe-2S] domain FED54_RS16130 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FED54_RS16135 PF01425 Amidase FED54_RS16145 PF07690 Major Facilitator Superfamily FED54_RS16155 PF00106 short chain dehydrogenase FED54_RS16170 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FED54_RS16170 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FED54_RS16170 PF02770 Acyl-CoA dehydrogenase, middle domain FED54_RS16175 PF03466 LysR substrate binding domain FED54_RS16175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_RS16180 PF09339 IclR helix-turn-helix domain FED54_RS16180 PF01614 Bacterial transcriptional regulator FED54_RS16185 PF00753 Metallo-beta-lactamase superfamily FED54_RS16195 PF04143 Sulphur transport FED54_RS16205 PF13360 PQQ-like domain FED54_RS16205 PF01011 PQQ enzyme repeat FED54_RS16210 PF04966 Carbohydrate-selective porin, OprB family FED54_RS16215 PF05048 Periplasmic copper-binding protein (NosD) FED54_RS16220 PF01487 Type I 3-dehydroquinase FED54_RS16225 PF00775 Dioxygenase FED54_RS16230 PF00775 Dioxygenase FED54_RS16230 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal FED54_RS16235 PF02627 Carboxymuconolactone decarboxylase family FED54_RS16240 PF07690 Major Facilitator Superfamily FED54_RS16245 PF00561 alpha/beta hydrolase fold FED54_RS16250 PF00206 Lyase FED54_RS16250 PF10397 Adenylosuccinate lyase C-terminus FED54_RS16255 PF02803 Thiolase, C-terminal domain FED54_RS16255 PF00108 Thiolase, N-terminal domain FED54_RS16260 PF01144 Coenzyme A transferase FED54_RS16265 PF01144 Coenzyme A transferase FED54_RS16270 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FED54_RS16275 PF04977 Septum formation initiator FED54_RS16285 PF00113 Enolase, C-terminal TIM barrel domain FED54_RS16285 PF03952 Enolase, N-terminal domain FED54_RS16290 PF00793 DAHP synthetase I family FED54_RS16295 PF00117 Glutamine amidotransferase class-I FED54_RS16295 PF06418 CTP synthase N-terminus FED54_RS16325 PF07992 Pyridine nucleotide-disulphide oxidoreductase FED54_RS16325 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FED54_RS16340 PF00793 DAHP synthetase I family FED54_RS16345 PF02694 Uncharacterised BCR, YnfA/UPF0060 family FED54_RS16350 PF17871 AAA lid domain FED54_RS16350 PF10431 C-terminal, D2-small domain, of ClpB protein FED54_RS16350 PF07724 AAA domain (Cdc48 subfamily) FED54_RS16350 PF02861 Clp amino terminal domain, pathogenicity island component FED54_RS16350 PF00004 ATPase family associated with various cellular activities (AAA) FED54_RS16355 PF02617 ATP-dependent Clp protease adaptor protein ClpS FED54_RS16365 PF01118 Semialdehyde dehydrogenase, NAD binding domain FED54_RS16365 PF02774 Semialdehyde dehydrogenase, dimerisation domain FED54_RS16380 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FED54_RS16385 PF00585 C-terminal regulatory domain of Threonine dehydratase FED54_RS16385 PF00291 Pyridoxal-phosphate dependent enzyme FED54_RS16390 PF02080 TrkA-C domain FED54_RS16390 PF02254 TrkA-N domain FED54_RS16395 PF02386 Cation transport protein FED54_RS16400 PF02253 Phospholipase A1 FED54_RS16405 PF05193 Peptidase M16 inactive domain FED54_RS16405 PF08367 Peptidase M16C associated FED54_RS16405 PF00675 Insulinase (Peptidase family M16) FED54_RS16410 PF00593 TonB dependent receptor FED54_RS16410 PF07715 TonB-dependent Receptor Plug Domain FED54_RS16415 PF00294 pfkB family carbohydrate kinase FED54_RS16425 PF07290 Protein of unknown function (DUF1449) FED54_RS16435 PF01654 Cytochrome bd terminal oxidase subunit I FED54_RS16440 PF02322 Cytochrome bd terminal oxidase subunit II FED54_RS16445 PF08173 Membrane bound YbgT-like protein FED54_RS16455 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) FED54_RS16465 PF00448 SRP54-type protein, GTPase domain FED54_RS16465 PF02881 SRP54-type protein, helical bundle domain FED54_RS16495 PF00478 IMP dehydrogenase / GMP reductase domain FED54_RS16495 PF00571 CBS domain FED54_RS16500 PF00202 Aminotransferase class-III FED54_RS16505 PF00462 Glutaredoxin FED54_RS16515 PF03466 LysR substrate binding domain FED54_RS16515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_RS16520 PF00557 Metallopeptidase family M24 FED54_RS16525 PF05525 Branched-chain amino acid transport protein FED54_RS16550 PF02896 PEP-utilising enzyme, TIM barrel domain FED54_RS16550 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FED54_RS16550 PF00391 PEP-utilising enzyme, mobile domain FED54_RS16550 PF05524 PEP-utilising enzyme, N-terminal FED54_RS16550 PF00381 PTS HPr component phosphorylation site FED54_RS16555 PF00294 pfkB family carbohydrate kinase FED54_RS16560 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FED54_RS16560 PF02378 Phosphotransferase system, EIIC FED54_RS16575 PF03707 Bacterial signalling protein N terminal repeat FED54_RS16575 PF00990 Diguanylate cyclase, GGDEF domain FED54_RS16575 PF00563 EAL domain FED54_RS16585 PF07995 Glucose / Sorbosone dehydrogenase FED54_RS16600 PF02586 SOS response associated peptidase (SRAP) FED54_RS16610 PF05922 Peptidase inhibitor I9 FED54_RS16610 PF00082 Subtilase family FED54_RS16620 PF00324 Amino acid permease FED54_RS16625 PF00266 Aminotransferase class-V FED54_RS16630 PF01037 Lrp/AsnC ligand binding domain FED54_RS16655 PF13419 Haloacid dehalogenase-like hydrolase FED54_RS16660 PF01479 S4 domain FED54_RS16665 PF00154 recA bacterial DNA recombination protein FED54_RS16670 PF02631 RecX family FED54_RS16685 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FED54_RS16685 PF00132 Bacterial transferase hexapeptide (six repeats) FED54_RS16690 PF07977 FabA-like domain FED54_RS16695 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FED54_RS16695 PF00132 Bacterial transferase hexapeptide (six repeats) FED54_RS16705 PF07244 Surface antigen variable number repeat FED54_RS16705 PF01103 Surface antigen FED54_RS16710 PF13180 PDZ domain FED54_RS16710 PF17820 PDZ domain FED54_RS16710 PF02163 Peptidase family M50 FED54_RS16715 PF13288 DXP reductoisomerase C-terminal domain FED54_RS16715 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FED54_RS16715 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FED54_RS16725 PF01255 Putative undecaprenyl diphosphate synthase FED54_RS16730 PF01765 Ribosome recycling factor FED54_RS16735 PF00696 Amino acid kinase family FED54_RS16740 PF04055 Radical SAM superfamily FED54_RS16740 PF18693 TRAM domain FED54_RS16740 PF00919 Uncharacterized protein family UPF0004 FED54_RS16750 PF00512 His Kinase A (phospho-acceptor) domain FED54_RS16750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED54_RS16750 PF00989 PAS fold FED54_RS16755 PF00158 Sigma-54 interaction domain FED54_RS16755 PF00072 Response regulator receiver domain FED54_RS16755 PF02954 Bacterial regulatory protein, Fis family FED54_RS16760 PF00440 Bacterial regulatory proteins, tetR family FED54_RS16765 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FED54_RS16765 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FED54_RS16775 PF02542 YgbB family FED54_RS16785 PF01266 FAD dependent oxidoreductase FED54_RS16810 PF10415 Fumarase C C-terminus FED54_RS16810 PF00206 Lyase FED54_RS16815 PF16363 GDP-mannose 4,6 dehydratase FED54_RS16820 PF02635 DsrE/DsrF-like family FED54_RS16840 PF00892 EamA-like transporter family FED54_RS16845 PF00155 Aminotransferase class I and II FED54_RS16845 PF00392 Bacterial regulatory proteins, gntR family FED54_RS16850 PF01638 HxlR-like helix-turn-helix FED54_RS16855 PF03453 MoeA N-terminal region (domain I and II) FED54_RS16855 PF03454 MoeA C-terminal region (domain IV) FED54_RS16855 PF00994 Probable molybdopterin binding domain FED54_RS16860 PF00994 Probable molybdopterin binding domain FED54_RS16860 PF01967 MoaC family FED54_RS16865 PF02391 MoaE protein FED54_RS16875 PF04055 Radical SAM superfamily FED54_RS16875 PF06463 Molybdenum Cofactor Synthesis C FED54_RS16885 PF12804 MobA-like NTP transferase domain FED54_RS16890 PF04324 BFD-like [2Fe-2S] binding domain FED54_RS16890 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FED54_RS16890 PF00384 Molybdopterin oxidoreductase FED54_RS16890 PF01568 Molydopterin dinucleotide binding domain FED54_RS16895 PF18267 Rubredoxin NAD+ reductase C-terminal domain FED54_RS16895 PF07992 Pyridine nucleotide-disulphide oxidoreductase FED54_RS16895 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FED54_RS16895 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FED54_RS16895 PF04324 BFD-like [2Fe-2S] binding domain FED54_RS16900 PF04324 BFD-like [2Fe-2S] binding domain FED54_RS16900 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FED54_RS16900 PF07992 Pyridine nucleotide-disulphide oxidoreductase FED54_RS16900 PF13806 Rieske-like [2Fe-2S] domain FED54_RS16900 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FED54_RS16900 PF18267 Rubredoxin NAD+ reductase C-terminal domain FED54_RS16910 PF00072 Response regulator receiver domain FED54_RS16910 PF00486 Transcriptional regulatory protein, C terminal FED54_RS16915 PF00005 ABC transporter FED54_RS16925 PF00817 impB/mucB/samB family FED54_RS16925 PF11799 impB/mucB/samB family C-terminal domain FED54_RS16925 PF13438 Domain of unknown function (DUF4113) FED54_RS16930 PF01220 Dehydroquinase class II FED54_RS16935 PF00364 Biotin-requiring enzyme FED54_RS16940 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FED54_RS16940 PF02785 Biotin carboxylase C-terminal domain FED54_RS16940 PF00289 Biotin carboxylase, N-terminal domain FED54_RS16950 PF12832 MFS_1 like family FED54_RS16990 PF07484 Phage Tail Collar Domain FED54_RS16990 PF08400 Prophage tail fibre N-terminal FED54_RS16990 PF03335 Phage tail fibre repeat FED54_RS17095 PF13276 HTH-like domain FED54_RS17095 PF00665 Integrase core domain FED54_RS17095 PF13333 Integrase core domain FED54_RS17285 PF01645 Conserved region in glutamate synthase FED54_RS17300 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FED54_RS17300 PF01565 FAD binding domain FED54_RS17305 PF01451 Low molecular weight phosphotyrosine protein phosphatase FED54_RS17315 PF00465 Iron-containing alcohol dehydrogenase FED54_RS17320 PF03061 Thioesterase superfamily FED54_RS17325 PF05506 Domain of unknown function (DUF756) FED54_RS17325 PF04185 Phosphoesterase family FED54_RS17330 PF12169 DNA polymerase III subunits gamma and tau domain III FED54_RS17330 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding FED54_RS17330 PF12170 DNA polymerase III tau subunit V interacting with alpha FED54_RS17345 PF07690 Major Facilitator Superfamily FED54_RS17355 PF00144 Beta-lactamase FED54_RS17360 PF01575 MaoC like domain FED54_RS17370 PF02803 Thiolase, C-terminal domain FED54_RS17370 PF00108 Thiolase, N-terminal domain FED54_RS17380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_RS17380 PF03466 LysR substrate binding domain FED54_RS17385 PF00923 Transaldolase/Fructose-6-phosphate aldolase FED54_RS17390 PF01810 LysE type translocator FED54_RS17395 PF01037 Lrp/AsnC ligand binding domain FED54_RS17400 PF03594 Benzoate membrane transport protein FED54_RS17405 PF02308 MgtC family FED54_RS17410 PF00690 Cation transporter/ATPase, N-terminus FED54_RS17410 PF00689 Cation transporting ATPase, C-terminus FED54_RS17425 PF00582 Universal stress protein family FED54_RS17430 PF00005 ABC transporter FED54_RS17430 PF12848 ABC transporter FED54_RS17455 PF00593 TonB dependent receptor FED54_RS17455 PF07715 TonB-dependent Receptor Plug Domain FED54_RS17485 PF00924 Mechanosensitive ion channel FED54_RS17490 PF00593 TonB dependent receptor FED54_RS17490 PF07715 TonB-dependent Receptor Plug Domain FED54_RS17530 PF01494 FAD binding domain FED54_RS17555 PF07690 Major Facilitator Superfamily FED54_RS17560 PF07690 Major Facilitator Superfamily FED54_RS17565 PF07992 Pyridine nucleotide-disulphide oxidoreductase FED54_RS17565 PF14759 Reductase C-terminal FED54_RS17570 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase FED54_RS17575 PF00106 short chain dehydrogenase FED54_RS17580 PF00355 Rieske [2Fe-2S] domain FED54_RS17585 PF00866 Ring hydroxylating beta subunit FED54_RS17590 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FED54_RS17590 PF00355 Rieske [2Fe-2S] domain FED54_RS17595 PF03466 LysR substrate binding domain FED54_RS17595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_RS17600 PF00561 alpha/beta hydrolase fold FED54_RS17605 PF03573 outer membrane porin, OprD family FED54_RS17610 PF07836 DmpG-like communication domain FED54_RS17610 PF00682 HMGL-like FED54_RS17615 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation FED54_RS17615 PF01118 Semialdehyde dehydrogenase, NAD binding domain FED54_RS17620 PF01557 Fumarylacetoacetate (FAA) hydrolase family FED54_RS17630 PF07690 Major Facilitator Superfamily FED54_RS17635 PF12706 Beta-lactamase superfamily domain FED54_RS17645 PF02656 Domain of unknown function (DUF202) FED54_RS17665 PF00005 ABC transporter FED54_RS17665 PF03412 Peptidase C39 family FED54_RS17665 PF00664 ABC transporter transmembrane region FED54_RS17670 PF02321 Outer membrane efflux protein FED54_RS17690 PF01389 OmpA-like transmembrane domain FED54_RS17690 PF00691 OmpA family FED54_RS17720 PF00691 OmpA family FED54_RS17720 PF01389 OmpA-like transmembrane domain FED54_RS17725 PF05658 Head domain of trimeric autotransporter adhesin FED54_RS17725 PF13018 Extended Signal Peptide of Type V secretion system FED54_RS17725 PF03895 YadA-like membrane anchor domain FED54_RS17725 PF05662 Coiled stalk of trimeric autotransporter adhesin FED54_RS17740 PF01037 Lrp/AsnC ligand binding domain FED54_RS17745 PF01817 Chorismate mutase type II FED54_RS17765 PF11940 Domain of unknown function (DUF3458) Ig-like fold FED54_RS17765 PF01433 Peptidase family M1 domain FED54_RS17765 PF17432 Domain of unknown function (DUF3458_C) ARM repeats FED54_RS17780 PF02110 Hydroxyethylthiazole kinase family FED54_RS17785 PF06445 GyrI-like small molecule binding domain FED54_RS17795 PF05970 PIF1-like helicase FED54_RS17795 PF14493 Helix-turn-helix domain FED54_RS17800 PF00465 Iron-containing alcohol dehydrogenase FED54_RS17815 PF00171 Aldehyde dehydrogenase family FED54_RS17820 PF13520 Amino acid permease FED54_RS17825 PF06751 Ethanolamine ammonia lyase large subunit (EutB) FED54_RS17830 PF05985 Ethanolamine ammonia-lyase light chain (EutC) FED54_RS17835 PF00117 Glutamine amidotransferase class-I FED54_RS17835 PF02540 NAD synthase FED54_RS17835 PF00958 GMP synthase C terminal domain FED54_RS17840 PF00749 tRNA synthetases class I (E and Q), catalytic domain FED54_RS17840 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain FED54_RS17845 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FED54_RS17850 PF00149 Calcineurin-like phosphoesterase FED54_RS17860 PF00881 Nitroreductase family FED54_RS17870 PF17209 Hfq protein FED54_RS17880 PF01119 DNA mismatch repair protein, C-terminal domain FED54_RS17880 PF08676 MutL C terminal dimerisation domain FED54_RS17885 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE FED54_RS17890 PF00849 RNA pseudouridylate synthase FED54_RS17890 PF01479 S4 domain FED54_RS17905 PF01479 S4 domain FED54_RS17905 PF00849 RNA pseudouridylate synthase FED54_RS17915 PF04284 Protein of unknown function (DUF441) FED54_RS17920 PF03466 LysR substrate binding domain FED54_RS17920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_RS17940 PF07690 Major Facilitator Superfamily FED54_RS17945 PF00520 Ion transport protein FED54_RS17945 PF00027 Cyclic nucleotide-binding domain FED54_RS17975 PF17243 POTRA domain TamA domain 1 FED54_RS17975 PF07244 Surface antigen variable number repeat FED54_RS17975 PF01103 Surface antigen FED54_RS17980 PF07690 Major Facilitator Superfamily FED54_RS17985 PF03232 Ubiquinone biosynthesis protein COQ7 FED54_RS17995 PF00120 Glutamine synthetase, catalytic domain FED54_RS18000 PF00486 Transcriptional regulatory protein, C terminal FED54_RS18000 PF00072 Response regulator receiver domain FED54_RS18005 PF00512 His Kinase A (phospho-acceptor) domain FED54_RS18005 PF13493 Domain of unknown function (DUF4118) FED54_RS18005 PF02702 Osmosensitive K+ channel His kinase sensor domain FED54_RS18005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED54_RS18010 PF02669 K+-transporting ATPase, c chain FED54_RS18020 PF03814 Potassium-transporting ATPase A subunit FED54_RS18035 PF03109 ABC1 family FED54_RS18040 PF00899 ThiF family FED54_RS18045 PF01613 Flavin reductase like domain FED54_RS18050 PF13193 AMP-binding enzyme C-terminal domain FED54_RS18050 PF00501 AMP-binding enzyme FED54_RS18055 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FED54_RS18055 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FED54_RS18055 PF02770 Acyl-CoA dehydrogenase, middle domain FED54_RS18060 PF00106 short chain dehydrogenase FED54_RS18065 PF12833 Helix-turn-helix domain FED54_RS18070 PF13847 Methyltransferase domain FED54_RS18070 PF17827 PrmC N-terminal domain FED54_RS18075 PF00472 RF-1 domain FED54_RS18075 PF03462 PCRF domain FED54_RS18085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_RS18085 PF03466 LysR substrate binding domain FED54_RS18105 PF00296 Luciferase-like monooxygenase FED54_RS18115 PF13994 PgaD-like protein FED54_RS18120 PF00535 Glycosyl transferase family 2 FED54_RS18125 PF01522 Polysaccharide deacetylase FED54_RS18125 PF14883 Hypothetical glycosyl hydrolase family 13 FED54_RS18135 PF03618 Kinase/pyrophosphorylase FED54_RS18140 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FED54_RS18140 PF00391 PEP-utilising enzyme, mobile domain FED54_RS18140 PF02896 PEP-utilising enzyme, TIM barrel domain FED54_RS18150 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FED54_RS18150 PF06481 COX Aromatic Rich Motif FED54_RS18155 PF00115 Cytochrome C and Quinol oxidase polypeptide I FED54_RS18160 PF00510 Cytochrome c oxidase subunit III FED54_RS18165 PF03626 Prokaryotic Cytochrome C oxidase subunit IV FED54_RS18170 PF01040 UbiA prenyltransferase family FED54_RS18175 PF01250 Ribosomal protein S6 FED54_RS18180 PF01084 Ribosomal protein S18 FED54_RS18185 PF01281 Ribosomal protein L9, N-terminal domain FED54_RS18185 PF03948 Ribosomal protein L9, C-terminal domain FED54_RS18190 PF03796 DnaB-like helicase C terminal domain FED54_RS18190 PF00772 DnaB-like helicase N terminal domain FED54_RS18195 PF00842 Alanine racemase, C-terminal domain FED54_RS18195 PF01168 Alanine racemase, N-terminal domain FED54_RS18205 PF08379 Bacterial transglutaminase-like N-terminal region FED54_RS18205 PF01841 Transglutaminase-like superfamily FED54_RS18215 PF14403 Circularly permuted ATP-grasp type 2 FED54_RS18225 PF01134 Glucose inhibited division protein A FED54_RS18225 PF13932 GidA associated domain FED54_RS18245 PF02954 Bacterial regulatory protein, Fis family FED54_RS18255 PF02844 Phosphoribosylglycinamide synthetase, N domain FED54_RS18255 PF02843 Phosphoribosylglycinamide synthetase, C domain FED54_RS18255 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FED54_RS18260 PF03180 NLPA lipoprotein FED54_RS18265 PF09383 NIL domain FED54_RS18265 PF00005 ABC transporter FED54_RS18270 PF00528 Binding-protein-dependent transport system inner membrane component FED54_RS18275 PF16123 Hydroxyacylglutathione hydrolase C-terminus FED54_RS18275 PF00753 Metallo-beta-lactamase superfamily FED54_RS18285 PF00375 Sodium:dicarboxylate symporter family FED54_RS18305 PF03466 LysR substrate binding domain FED54_RS18305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED54_RS18310 PF07690 Major Facilitator Superfamily FED54_RS18315 PF01494 FAD binding domain FED54_RS18325 PF00440 Bacterial regulatory proteins, tetR family FED54_RS18325 PF17932 Tetracyclin repressor-like, C-terminal domain FED54_RS18335 PF07995 Glucose / Sorbosone dehydrogenase FED54_RS18340 PF00892 EamA-like transporter family FED54_RS18345 PF01177 Asp/Glu/Hydantoin racemase FED54_RS18350 PF00085 Thioredoxin FED54_RS18350 PF07992 Pyridine nucleotide-disulphide oxidoreductase FED54_RS18365 PF02470 MlaD protein FED54_RS18370 PF04403 Paraquat-inducible protein A FED54_RS18410 PF00293 NUDIX domain FED54_RS18415 PF00083 Sugar (and other) transporter FED54_RS18415 PF08946 Osmosensory transporter coiled coil FED54_RS18470 PF00392 Bacterial regulatory proteins, gntR family FED54_RS18470 PF07729 FCD domain FED54_RS18480 PF03616 Sodium/glutamate symporter FED54_RS18485 PF00561 alpha/beta hydrolase fold FED54_RS18510 PF04076 Bacterial OB fold (BOF) protein FED54_RS18520 PF13649 Methyltransferase domain FED54_RS18540 PF00324 Amino acid permease FED54_RS18545 PF00171 Aldehyde dehydrogenase family FED54_RS18605 PF13332 Hemagglutinin repeat FED54_RS18605 PF13018 Extended Signal Peptide of Type V secretion system FED54_RS18605 PF13018 Extended Signal Peptide of Type V secretion system FED54_RS18605 PF05860 haemagglutination activity domain FED54_RS18605 PF13332 Hemagglutinin repeat FED54_RS18605 PF05860 haemagglutination activity domain FED54_RS18605 PF04829 Pre-toxin domain with VENN motif FED54_RS18605 PF04829 Pre-toxin domain with VENN motif FED54_RS18610 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB FED54_RS18610 PF08479 POTRA domain, ShlB-type FED54_RS18610 PF17287 POTRA domain FED54_RS18635 PF03793 PASTA domain FED54_RS18635 PF00069 Protein kinase domain FED54_RS18655 PF00814 Glycoprotease family FED54_RS18660 PF01165 Ribosomal protein S21 FED54_RS18665 PF09424 Yqey-like protein FED54_RS18670 PF01435 Peptidase family M48 FED54_RS18675 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FED54_RS18675 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FED54_RS18690 PF00156 Phosphoribosyl transferase domain FED54_RS18695 PF02674 Colicin V production protein FED54_RS18700 PF01180 Dihydroorotate dehydrogenase FED54_RS18720 PF00182 Chitinase class I FED54_RS18975 PF00772 DnaB-like helicase N terminal domain FED54_RS18975 PF03796 DnaB-like helicase C terminal domain FED54_RS19080 PF00589 Phage integrase family FED54_RS19090 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FED54_RS19090 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FED54_RS19095 PF00881 Nitroreductase family FED54_RS19105 PF00271 Helicase conserved C-terminal domain FED54_RS19105 PF00270 DEAD/DEAH box helicase FED54_RS19110 PF00313 'Cold-shock' DNA-binding domain FED54_RS19120 PF04542 Sigma-70 region 2 FED54_RS19120 PF00140 Sigma-70 factor, region 1.2 FED54_RS19120 PF04545 Sigma-70, region 4 FED54_RS19125 PF04241 Protein of unknown function (DUF423) FED54_RS19135 PF05690 Thiazole biosynthesis protein ThiG FED54_RS19145 PF03883 Peroxide stress protein YaaA FED54_RS19155 PF06956 Regulator of RNA terminal phosphate cyclase FED54_RS19155 PF00158 Sigma-54 interaction domain FED54_RS19160 PF00753 Metallo-beta-lactamase superfamily FED54_RS19165 PF01139 tRNA-splicing ligase RtcB FED54_RS19180 PF01137 RNA 3'-terminal phosphate cyclase FED54_RS19180 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain FED54_RS19185 PF07687 Peptidase dimerisation domain FED54_RS19185 PF01546 Peptidase family M20/M25/M40 FED54_RS19195 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FED54_RS19200 PF01842 ACT domain FED54_RS19200 PF01817 Chorismate mutase type II FED54_RS19200 PF00800 Prephenate dehydratase FED54_RS19205 PF00756 Putative esterase FED54_RS19210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FED54_RS19210 PF02770 Acyl-CoA dehydrogenase, middle domain FED54_RS19210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FED54_RS19215 PF00375 Sodium:dicarboxylate symporter family FED54_RS19225 PF02885 Glycosyl transferase family, helical bundle domain FED54_RS19225 PF00591 Glycosyl transferase family, a/b domain FED54_RS19230 PF07023 Protein of unknown function (DUF1315) FED54_RS19235 PF01513 ATP-NAD kinase FED54_RS19240 PF14814 Bifunctional transglycosylase second domain FED54_RS19240 PF00905 Penicillin binding protein transpeptidase domain FED54_RS19240 PF00912 Transglycosylase FED54_RS19250 PF00293 NUDIX domain FED54_RS19260 PF00512 His Kinase A (phospho-acceptor) domain FED54_RS19260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED54_RS19260 PF08521 Two-component sensor kinase N-terminal FED54_RS19265 PF00072 Response regulator receiver domain FED54_RS19265 PF00486 Transcriptional regulatory protein, C terminal FED54_RS19275 PF00437 Type II/IV secretion system protein FED54_RS19275 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FED54_RS19285 PF01980 tRNA-methyltransferase O FED54_RS19285 PF18389 TrmO C-terminal domain FED54_RS19290 PF00175 Oxidoreductase NAD-binding domain FED54_RS19290 PF00970 Oxidoreductase FAD-binding domain FED54_RS19295 PF02567 Phenazine biosynthesis-like protein FED54_RS19300 PF00392 Bacterial regulatory proteins, gntR family FED54_RS19300 PF00155 Aminotransferase class I and II FED54_RS19305 PF16325 Peptidase family U32 C-terminal domain FED54_RS19305 PF01136 Peptidase family U32 FED54_RS19310 PF00037 4Fe-4S binding domain FED54_RS19315 PF00893 Small Multidrug Resistance protein FED54_RS19320 PF00005 ABC transporter FED54_RS19325 PF00528 Binding-protein-dependent transport system inner membrane component FED54_RS19330 PF00528 Binding-protein-dependent transport system inner membrane component FED54_RS19335 PF00497 Bacterial extracellular solute-binding proteins, family 3 FED54_RS19355 PF13533 Biotin-lipoyl like FED54_RS19360 PF00873 AcrB/AcrD/AcrF family FED54_RS19365 PF02321 Outer membrane efflux protein FED54_RS19370 PF00464 Serine hydroxymethyltransferase FED54_RS19465 PF00583 Acetyltransferase (GNAT) family FED54_RS19555 PF01695 IstB-like ATP binding protein FED54_RS19580 PF00717 Peptidase S24-like FED54_RS19640 PF00589 Phage integrase family FED54_RS19645 PF00005 ABC transporter FED54_RS19650 PF01061 ABC-2 type transporter FED54_RS19655 PF14489 QueF-like protein FED54_RS19655 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term FED54_RS19665 PF01098 Cell cycle protein FED54_RS19670 PF13406 Transglycosylase SLT domain FED54_RS19675 PF05036 Sporulation related domain FED54_RS19675 PF03330 Lytic transglycolase FED54_RS19695 PF12833 Helix-turn-helix domain FED54_RS19705 PF00889 Elongation factor TS FED54_RS19710 PF00318 Ribosomal protein S2 FED54_RS19715 PF00557 Metallopeptidase family M24 FED54_RS19725 PF07690 Major Facilitator Superfamily FED54_RS19735 PF07992 Pyridine nucleotide-disulphide oxidoreductase FED54_RS19735 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FED54_RS19740 PF04055 Radical SAM superfamily FED54_RS19745 PF09317 Domain of unknown function (DUF1974) FED54_RS19745 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FED54_RS19745 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FED54_RS19760 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain FED54_RS19760 PF05221 S-adenosyl-L-homocysteine hydrolase FED54_RS19765 PF02219 Methylenetetrahydrofolate reductase FED54_RS19770 PF04452 RNA methyltransferase FED54_RS19775 PF03707 Bacterial signalling protein N terminal repeat FED54_RS19775 PF00990 Diguanylate cyclase, GGDEF domain FED54_RS19775 PF00563 EAL domain FED54_RS19780 PF00390 Malic enzyme, N-terminal domain FED54_RS19780 PF01515 Phosphate acetyl/butaryl transferase FED54_RS19780 PF03949 Malic enzyme, NAD binding domain FED54_RS19785 PF01743 Poly A polymerase head domain FED54_RS19785 PF12627 Probable RNA and SrmB- binding site of polymerase A FED54_RS19790 PF13180 PDZ domain FED54_RS19795 PF01784 NIF3 (NGG1p interacting factor 3) FED54_RS19800 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FED54_RS19800 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FED54_RS19835 PF01040 UbiA prenyltransferase family FED54_RS19840 PF04345 Chorismate lyase FED54_RS19845 PF00120 Glutamine synthetase, catalytic domain FED54_RS19845 PF03951 Glutamine synthetase, beta-Grasp domain FED54_RS19850 PF00854 POT family FED54_RS19860 PF00117 Glutamine amidotransferase class-I FED54_RS19865 PF01433 Peptidase family M1 domain FED54_RS19865 PF11838 ERAP1-like C-terminal domain FED54_RS19870 PF00593 TonB dependent receptor FED54_RS19870 PF07715 TonB-dependent Receptor Plug Domain FED54_RS19875 PF02885 Glycosyl transferase family, helical bundle domain FED54_RS19875 PF00591 Glycosyl transferase family, a/b domain FED54_RS19885 PF01713 Smr domain FED54_RS19895 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FED54_RS19895 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FED54_RS19900 PF00111 2Fe-2S iron-sulfur cluster binding domain FED54_RS19900 PF01799 [2Fe-2S] binding domain FED54_RS19905 PF01227 GTP cyclohydrolase I FED54_RS19910 PF00144 Beta-lactamase FED54_RS19925 PF05675 Protein of unknown function (DUF817) FED54_RS19930 PF01208 Uroporphyrinogen decarboxylase (URO-D) FED54_RS19940 PF00425 chorismate binding enzyme FED54_RS19945 PF01648 4'-phosphopantetheinyl transferase superfamily FED54_RS19945 PF17837 4'-phosphopantetheinyl transferase N-terminal domain FED54_RS19950 PF00975 Thioesterase domain FED54_RS19955 PF00005 ABC transporter FED54_RS19960 PF00005 ABC transporter FED54_RS19970 PF00282 Pyridoxal-dependent decarboxylase conserved domain FED54_RS19975 PF00550 Phosphopantetheine attachment site FED54_RS19975 PF00857 Isochorismatase family FED54_RS19980 PF13193 AMP-binding enzyme C-terminal domain FED54_RS19980 PF00501 AMP-binding enzyme FED54_RS19985 PF00501 AMP-binding enzyme FED54_RS19985 PF00668 Condensation domain FED54_RS19985 PF00550 Phosphopantetheine attachment site FED54_RS19990 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) FED54_RS19995 PF00593 TonB dependent receptor FED54_RS19995 PF07715 TonB-dependent Receptor Plug Domain FED54_RS20000 PF01497 Periplasmic binding protein FED54_RS20005 PF00005 ABC transporter FED54_RS20010 PF01032 FecCD transport family FED54_RS20015 PF01032 FecCD transport family FED54_RS20020 PF00668 Condensation domain FED54_RS20020 PF00550 Phosphopantetheine attachment site FED54_RS20020 PF00975 Thioesterase domain FED54_RS20020 PF13193 AMP-binding enzyme C-terminal domain FED54_RS20020 PF00501 AMP-binding enzyme FED54_RS20025 PF00501 AMP-binding enzyme FED54_RS20025 PF00668 Condensation domain FED54_RS20025 PF00550 Phosphopantetheine attachment site FED54_RS20025 PF13193 AMP-binding enzyme C-terminal domain FED54_RS20035 PF08348 YheO-like PAS domain FED54_RS20035 PF13309 HTH domain FED54_RS20040 PF00291 Pyridoxal-phosphate dependent enzyme FED54_RS20045 PF02678 Pirin FED54_RS20045 PF17954 Quercetinase C-terminal cupin domain FED54_RS20090 PF04328 Selenoprotein, putative FED54_RS20095 PF13722 5TM C-terminal transporter carbon starvation CstA FED54_RS20095 PF02554 Carbon starvation protein CstA FED54_RS20100 PF08207 Elongation factor P (EF-P) KOW-like domain FED54_RS20100 PF09285 Elongation factor P, C-terminal FED54_RS20100 PF01132 Elongation factor P (EF-P) OB domain FED54_RS20105 PF04055 Radical SAM superfamily FED54_RS20115 PF00563 EAL domain FED54_RS20115 PF12792 CSS motif domain associated with EAL FED54_RS20120 PF01197 Ribosomal protein L31 FED54_RS20125 PF13593 SBF-like CPA transporter family (DUF4137) FED54_RS20130 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FED54_RS20135 PF07690 Major Facilitator Superfamily FED54_RS20140 PF05362 Lon protease (S16) C-terminal proteolytic domain FED54_RS20140 PF13654 AAA domain FED54_RS20145 PF11799 impB/mucB/samB family C-terminal domain FED54_RS20145 PF00817 impB/mucB/samB family FED54_RS20145 PF11798 IMS family HHH motif FED54_RS20145 PF13438 Domain of unknown function (DUF4113) FED54_RS20150 PF00717 Peptidase S24-like FED54_RS20175 PF01551 Peptidase family M23 FED54_RS20175 PF04225 Opacity-associated protein A LysM-like domain FED54_RS20295 PF13737 Transposase DDE domain FED54_RS20365 PF01435 Peptidase family M48 FED54_RS20395 PF00665 Integrase core domain FED54_RS20415 PF00582 Universal stress protein family FED54_RS20420 PF01740 STAS domain FED54_RS20420 PF00916 Sulfate permease family FED54_RS20450 PF02899 Phage integrase, N-terminal SAM-like domain FED54_RS20450 PF00589 Phage integrase family FED54_RS20475 PF00665 Integrase core domain FED54_RS20495 PF00809 Pterin binding enzyme FED54_RS20500 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FED54_RS20500 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FED54_RS20500 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FED54_RS20500 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FED54_RS20510 PF07690 Major Facilitator Superfamily FED54_RS20515 PF00440 Bacterial regulatory proteins, tetR family FED54_RS20515 PF02909 Tetracyclin repressor-like, C-terminal domain FED54_RS20540 PF00239 Resolvase, N terminal domain FED54_RS20540 PF02796 Helix-turn-helix domain of resolvase FED54_RS20550 PF13610 DDE domain FED54_RS20555 PF01051 Initiator Replication protein FED54_RS20565 PF01636 Phosphotransferase enzyme family FED54_RS20570 PF00005 ABC transporter FED54_RS20570 PF12848 ABC transporter FED54_RS20590 PF07091 Ribosomal RNA methyltransferase (FmrO) FED54_RS20615 PF00809 Pterin binding enzyme FED54_RS20645 PF00809 Pterin binding enzyme FED54_RS20650 PF00893 Small Multidrug Resistance protein FED54_RS20660 PF07690 Major Facilitator Superfamily FED54_RS20670 PF00589 Phage integrase family FED54_RS20670 PF13495 Phage integrase, N-terminal SAM-like domain FED54_RS20675 PF13610 DDE domain FED54_RS20735 PF08535 KorB domain FED54_RS20735 PF02195 ParB-like nuclease domain FED54_RS20735 PF06613 KorB C-terminal beta-barrel domain FED54_RS20740 PF13614 AAA domain FED54_RS20755 PF00809 Pterin binding enzyme FED54_RS20760 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FED54_RS20760 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FED54_RS20760 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FED54_RS20760 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FED54_RS20785 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase FED54_RS20790 PF01636 Phosphotransferase enzyme family FED54_RS20810 PF01396 Topoisomerase DNA binding C4 zinc finger FED54_RS20810 PF01751 Toprim domain FED54_RS20810 PF01131 DNA topoisomerase FED54_RS20890 PF13610 DDE domain FED54_RS20900 PF08240 Alcohol dehydrogenase GroES-like domain FED54_RS20900 PF00107 Zinc-binding dehydrogenase FED54_RS20905 PF02583 Metal-sensitive transcriptional repressor FED54_RS20930 PF13610 DDE domain FED54_RS20980 PF05973 Phage derived protein Gp49-like (DUF891) FED54_RS21000 PF13086 AAA domain FED54_RS21000 PF13087 AAA domain FED54_RS21000 PF13195 Protein of unknown function (DUF4011) FED54_RS21010 PF00239 Resolvase, N terminal domain FED54_RS21010 PF02796 Helix-turn-helix domain of resolvase FED54_RS21030 PF00916 Sulfate permease family FED54_RS21030 PF01740 STAS domain FED54_RS21035 PF13610 DDE domain FED54_RS21090 PF13635 Domain of unknown function (DUF4143) FED54_RS21090 PF13173 AAA domain FED54_RS21105 PF13737 Transposase DDE domain FED54_RS21145 PF13610 DDE domain FED54_RS21170 PF01636 Phosphotransferase enzyme family FED54_RS21210 PF00437 Type II/IV secretion system protein FED54_RS21210 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FED54_RS21260 PF13614 AAA domain FED54_RS21265 PF02195 ParB-like nuclease domain FED54_RS21265 PF17762 HTH domain found in ParB protein FED54_RS21300 PF00593 TonB dependent receptor FED54_RS21300 PF07715 TonB-dependent Receptor Plug Domain FED54_RS21320 PF00239 Resolvase, N terminal domain FED54_RS21320 PF02796 Helix-turn-helix domain of resolvase FED54_RS21325 PF01126 Heme oxygenase FED54_RS21330 PF00593 TonB dependent receptor FED54_RS21330 PF07715 TonB-dependent Receptor Plug Domain FED54_RS21335 PF04304 Protein of unknown function (DUF454)