locus-tag class description CV094_RS00005 PF00501 AMP-binding enzyme CV094_RS00005 PF13193 AMP-binding enzyme C-terminal domain CV094_RS00010 PF04341 Protein of unknown function, DUF485 CV094_RS00015 PF00474 Sodium:solute symporter family CV094_RS00020 PF08240 Alcohol dehydrogenase GroES-like domain CV094_RS00020 PF00107 Zinc-binding dehydrogenase CV094_RS00025 PF00171 Aldehyde dehydrogenase family CV094_RS00035 PF00561 alpha/beta hydrolase fold CV094_RS00040 PF00199 Catalase CV094_RS00040 PF06628 Catalase-related immune-responsive CV094_RS00060 PF07859 alpha/beta hydrolase fold CV094_RS00065 PF01047 MarR family CV094_RS00070 PF07992 Pyridine nucleotide-disulphide oxidoreductase CV094_RS00070 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CV094_RS00075 PF00106 short chain dehydrogenase CV094_RS00080 PF01872 RibD C-terminal domain CV094_RS00085 PF00376 MerR family regulatory protein CV094_RS00085 PF09278 MerR, DNA binding CV094_RS00095 PF07992 Pyridine nucleotide-disulphide oxidoreductase CV094_RS00105 PF12706 Beta-lactamase superfamily domain CV094_RS00110 PF08359 YsiA-like protein, C-terminal region CV094_RS00110 PF00440 Bacterial regulatory proteins, tetR family CV094_RS00120 PF00857 Isochorismatase family CV094_RS00125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CV094_RS00125 PF03466 LysR substrate binding domain CV094_RS00130 PF07995 Glucose / Sorbosone dehydrogenase CV094_RS00135 PF02254 TrkA-N domain CV094_RS00135 PF00999 Sodium/hydrogen exchanger family CV094_RS00145 PF01546 Peptidase family M20/M25/M40 CV094_RS00145 PF07687 Peptidase dimerisation domain CV094_RS00165 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CV094_RS00165 PF17287 POTRA domain CV094_RS00165 PF08479 POTRA domain, ShlB-type CV094_RS00185 PF07690 Major Facilitator Superfamily CV094_RS00190 PF04909 Amidohydrolase CV094_RS00200 PF00392 Bacterial regulatory proteins, gntR family CV094_RS00200 PF07702 UTRA domain CV094_RS00205 PF08450 SMP-30/Gluconolactonase/LRE-like region CV094_RS00215 PF03466 LysR substrate binding domain CV094_RS00215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CV094_RS00235 PF07690 Major Facilitator Superfamily CV094_RS00240 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CV094_RS00240 PF01842 ACT domain CV094_RS00240 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CV094_RS00245 PF03737 Aldolase/RraA CV094_RS00265 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CV094_RS00265 PF00529 HlyD membrane-fusion protein of T1SS CV094_RS00280 PF00171 Aldehyde dehydrogenase family CV094_RS00285 PF00920 Dehydratase family CV094_RS00295 PF03466 LysR substrate binding domain CV094_RS00295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CV094_RS00300 PF01370 NAD dependent epimerase/dehydratase family CV094_RS00305 PF07690 Major Facilitator Superfamily CV094_RS00310 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CV094_RS00310 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CV094_RS00315 PF06719 AraC-type transcriptional regulator N-terminus CV094_RS00315 PF12833 Helix-turn-helix domain CV094_RS00330 PF08240 Alcohol dehydrogenase GroES-like domain CV094_RS00330 PF00107 Zinc-binding dehydrogenase CV094_RS00340 PF01032 FecCD transport family CV094_RS00345 PF00005 ABC transporter CV094_RS00365 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CV094_RS00365 PF14572 Phosphoribosyl synthetase-associated domain CV094_RS00370 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CV094_RS00450 PF00196 Bacterial regulatory proteins, luxR family CV094_RS00455 PF01425 Amidase CV094_RS00460 PF13533 Biotin-lipoyl like CV094_RS00465 PF07690 Major Facilitator Superfamily CV094_RS00490 PF01975 Survival protein SurE CV094_RS00500 PF04607 Region found in RelA / SpoT proteins CV094_RS00500 PF02824 TGS domain CV094_RS00500 PF13291 ACT domain CV094_RS00555 PF12146 Serine aminopeptidase, S33 CV094_RS00560 PF12833 Helix-turn-helix domain CV094_RS00560 PF02311 AraC-like ligand binding domain CV094_RS00570 PF00672 HAMP domain CV094_RS00570 PF00512 His Kinase A (phospho-acceptor) domain CV094_RS00570 PF16527 Two-component sensor protein CpxA, periplasmic domain CV094_RS00570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CV094_RS00575 PF00072 Response regulator receiver domain CV094_RS00575 PF00486 Transcriptional regulatory protein, C terminal CV094_RS00580 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CV094_RS00580 PF00529 HlyD membrane-fusion protein of T1SS CV094_RS00585 PF00873 AcrB/AcrD/AcrF family CV094_RS00590 PF02321 Outer membrane efflux protein CV094_RS00595 PF12146 Serine aminopeptidase, S33 CV094_RS00600 PF00743 Flavin-binding monooxygenase-like CV094_RS00605 PF01593 Flavin containing amine oxidoreductase CV094_RS00620 PF01266 FAD dependent oxidoreductase CV094_RS00640 PF16970 Type-1 fimbrial protein, A CV094_RS00650 PF02753 Pili assembly chaperone PapD, C-terminal domain CV094_RS00650 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CV094_RS00655 PF13954 PapC N-terminal domain CV094_RS00655 PF13953 PapC C-terminal domain CV094_RS00655 PF00577 Outer membrane usher protein CV094_RS00660 PF00419 Fimbrial protein CV094_RS00670 PF08240 Alcohol dehydrogenase GroES-like domain CV094_RS00670 PF00107 Zinc-binding dehydrogenase CV094_RS00680 PF00199 Catalase CV094_RS00695 PF13091 PLD-like domain CV094_RS00715 PF01244 Membrane dipeptidase (Peptidase family M19) CV094_RS00720 PF13186 Iron-sulfur cluster-binding domain CV094_RS00720 PF04055 Radical SAM superfamily CV094_RS00725 PF05402 Coenzyme PQQ synthesis protein D (PqqD) CV094_RS00730 PF03070 TENA/THI-4/PQQC family CV094_RS00735 PF12706 Beta-lactamase superfamily domain CV094_RS00740 PF08042 PqqA family CV094_RS00745 PF13090 Polyphosphate kinase C-terminal domain 2 CV094_RS00745 PF13089 Polyphosphate kinase N-terminal domain CV094_RS00745 PF02503 Polyphosphate kinase middle domain CV094_RS00745 PF17941 Polyphosphate kinase C-terminal domain 1 CV094_RS00750 PF00149 Calcineurin-like phosphoesterase CV094_RS00760 PF00550 Phosphopantetheine attachment site CV094_RS00760 PF00857 Isochorismatase family CV094_RS00765 PF00106 short chain dehydrogenase CV094_RS00770 PF03459 TOBE domain CV094_RS00770 PF00005 ABC transporter CV094_RS00775 PF00528 Binding-protein-dependent transport system inner membrane component CV094_RS00785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CV094_RS00785 PF03459 TOBE domain CV094_RS00790 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CV094_RS00790 PF00355 Rieske [2Fe-2S] domain CV094_RS00795 PF00866 Ring hydroxylating beta subunit CV094_RS00800 PF00175 Oxidoreductase NAD-binding domain CV094_RS00800 PF00111 2Fe-2S iron-sulfur cluster binding domain CV094_RS00800 PF00970 Oxidoreductase FAD-binding domain CV094_RS00805 PF12833 Helix-turn-helix domain CV094_RS00805 PF14525 AraC-binding-like domain CV094_RS00815 PF01613 Flavin reductase like domain CV094_RS00830 PF01738 Dienelactone hydrolase family CV094_RS00835 PF07690 Major Facilitator Superfamily CV094_RS00840 PF12833 Helix-turn-helix domain CV094_RS00840 PF06719 AraC-type transcriptional regulator N-terminus CV094_RS00865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CV094_RS00865 PF03466 LysR substrate binding domain CV094_RS00870 PF01144 Coenzyme A transferase CV094_RS00875 PF01144 Coenzyme A transferase CV094_RS00880 PF02667 Short chain fatty acid transporter CV094_RS00885 PF00108 Thiolase, N-terminal domain CV094_RS00885 PF02803 Thiolase, C-terminal domain CV094_RS00890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CV094_RS00890 PF03466 LysR substrate binding domain CV094_RS00895 PF03466 LysR substrate binding domain CV094_RS00895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CV094_RS00910 PF00206 Lyase CV094_RS00910 PF10415 Fumarase C C-terminus CV094_RS00915 PF07715 TonB-dependent Receptor Plug Domain CV094_RS00915 PF00593 TonB dependent receptor CV094_RS00920 PF00083 Sugar (and other) transporter CV094_RS00935 PF00005 ABC transporter CV094_RS00940 PF00528 Binding-protein-dependent transport system inner membrane component CV094_RS00945 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CV094_RS00960 PF00392 Bacterial regulatory proteins, gntR family CV094_RS00960 PF07702 UTRA domain CV094_RS00970 PF02525 Flavodoxin-like fold CV094_RS00975 PF01638 HxlR-like helix-turn-helix CV094_RS00980 PF12833 Helix-turn-helix domain CV094_RS00980 PF06445 GyrI-like small molecule binding domain CV094_RS00995 PF01925 Sulfite exporter TauE/SafE CV094_RS01000 PF04273 Putative phosphatase (DUF442) CV094_RS01000 PF00753 Metallo-beta-lactamase superfamily CV094_RS01005 PF00753 Metallo-beta-lactamase superfamily CV094_RS01005 PF04273 Putative phosphatase (DUF442) CV094_RS01010 PF00072 Response regulator receiver domain CV094_RS01010 PF02954 Bacterial regulatory protein, Fis family CV094_RS01010 PF00158 Sigma-54 interaction domain CV094_RS01015 PF01062 Bestrophin, RFP-TM, chloride channel CV094_RS01020 PF00107 Zinc-binding dehydrogenase CV094_RS01020 PF08240 Alcohol dehydrogenase GroES-like domain CV094_RS01025 PF00106 short chain dehydrogenase CV094_RS01030 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CV094_RS01030 PF07992 Pyridine nucleotide-disulphide oxidoreductase CV094_RS01035 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CV094_RS01035 PF02817 e3 binding domain CV094_RS01035 PF00364 Biotin-requiring enzyme CV094_RS01040 PF02779 Transketolase, pyrimidine binding domain CV094_RS01040 PF02780 Transketolase, C-terminal domain CV094_RS01045 PF00676 Dehydrogenase E1 component CV094_RS01050 PF04055 Radical SAM superfamily CV094_RS01065 PF00990 Diguanylate cyclase, GGDEF domain CV094_RS01065 PF08448 PAS fold CV094_RS01070 PF01264 Chorismate synthase CV094_RS01075 PF05175 Methyltransferase small domain CV094_RS01080 PF00291 Pyridoxal-phosphate dependent enzyme CV094_RS01090 PF01434 Peptidase family M41 CV094_RS01090 PF17862 AAA+ lid domain CV094_RS01090 PF00004 ATPase family associated with various cellular activities (AAA) CV094_RS01100 PF05166 YcgL domain CV094_RS01120 PF00570 HRDC domain CV094_RS01120 PF01612 3'-5' exonuclease CV094_RS01125 PF02132 RecR protein CV094_RS01125 PF13662 Toprim domain CV094_RS01130 PF02575 YbaB/EbfC DNA-binding family CV094_RS01140 PF01053 Cys/Met metabolism PLP-dependent enzyme CV094_RS01145 PF00561 alpha/beta hydrolase fold CV094_RS01150 PF08241 Methyltransferase domain CV094_RS01180 PF01230 HIT domain CV094_RS01215 PF00005 ABC transporter CV094_RS01220 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CV094_RS01230 PF02684 Lipid-A-disaccharide synthetase CV094_RS01235 PF00593 TonB dependent receptor CV094_RS01235 PF07715 TonB-dependent Receptor Plug Domain CV094_RS01255 PF01925 Sulfite exporter TauE/SafE CV094_RS01260 PF00793 DAHP synthetase I family CV094_RS01265 PF02654 Cobalamin-5-phosphate synthase CV094_RS01280 PF02277 Phosphoribosyltransferase CV094_RS01285 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CV094_RS01325 PF00593 TonB dependent receptor CV094_RS01325 PF07715 TonB-dependent Receptor Plug Domain CV094_RS01340 PF04183 IucA / IucC family CV094_RS01340 PF06276 Ferric iron reductase FhuF-like transporter CV094_RS01345 PF06276 Ferric iron reductase FhuF-like transporter CV094_RS01345 PF04183 IucA / IucC family CV094_RS01350 PF07690 Major Facilitator Superfamily CV094_RS01355 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) CV094_RS01360 PF04183 IucA / IucC family CV094_RS01360 PF06276 Ferric iron reductase FhuF-like transporter CV094_RS01365 PF04073 Aminoacyl-tRNA editing domain CV094_RS01375 PF03109 ABC1 family CV094_RS01380 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CV094_RS01380 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CV094_RS01380 PF02770 Acyl-CoA dehydrogenase, middle domain CV094_RS01385 PF02770 Acyl-CoA dehydrogenase, middle domain CV094_RS01385 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CV094_RS01385 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CV094_RS01390 PF00487 Fatty acid desaturase CV094_RS01395 PF12833 Helix-turn-helix domain CV094_RS01395 PF12852 Cupin CV094_RS01400 PF09312 SurA N-terminal domain CV094_RS01400 PF00639 PPIC-type PPIASE domain CV094_RS01405 PF00216 Bacterial DNA-binding protein CV094_RS01420 PF02082 Transcriptional regulator CV094_RS01425 PF00266 Aminotransferase class-V CV094_RS01430 PF01592 NifU-like N terminal domain CV094_RS01435 PF01521 Iron-sulphur cluster biosynthesis CV094_RS01440 PF00226 DnaJ domain CV094_RS01440 PF07743 HSCB C-terminal oligomerisation domain CV094_RS01445 PF00012 Hsp70 protein CV094_RS01450 PF00111 2Fe-2S iron-sulfur cluster binding domain CV094_RS01455 PF00211 Adenylate and Guanylate cyclase catalytic domain CV094_RS01465 PF17757 UvrB interaction domain CV094_RS01465 PF00271 Helicase conserved C-terminal domain CV094_RS01465 PF03461 TRCF domain CV094_RS01465 PF02559 CarD-like/TRCF domain CV094_RS01465 PF00270 DEAD/DEAH box helicase CV094_RS01485 PF03737 Aldolase/RraA CV094_RS01490 PF13460 NAD(P)H-binding CV094_RS01495 PF01649 Ribosomal protein S20 CV094_RS01520 PF00005 ABC transporter CV094_RS01520 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CV094_RS01525 PF00528 Binding-protein-dependent transport system inner membrane component CV094_RS01530 PF00528 Binding-protein-dependent transport system inner membrane component CV094_RS01535 PF01432 Peptidase family M3 CV094_RS01555 PF00593 TonB dependent receptor CV094_RS01555 PF07715 TonB-dependent Receptor Plug Domain CV094_RS01565 PF01618 MotA/TolQ/ExbB proton channel family CV094_RS01570 PF02472 Biopolymer transport protein ExbD/TolR CV094_RS01575 PF02472 Biopolymer transport protein ExbD/TolR CV094_RS01585 PF01274 Malate synthase CV094_RS01590 PF03969 AFG1-like ATPase CV094_RS01600 PF00743 Flavin-binding monooxygenase-like CV094_RS01610 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CV094_RS01620 PF00216 Bacterial DNA-binding protein CV094_RS01625 PF00575 S1 RNA binding domain CV094_RS01630 PF02224 Cytidylate kinase CV094_RS01640 PF14437 MafB19-like deaminase CV094_RS01650 PF03167 Uracil DNA glycosylase superfamily CV094_RS01660 PF03934 Type II secretion system (T2SS), protein K CV094_RS01665 PF11612 Type II secretion system (T2SS), protein J CV094_RS01665 PF07963 Prokaryotic N-terminal methylation motif CV094_RS01670 PF07963 Prokaryotic N-terminal methylation motif CV094_RS01670 PF02501 Type II secretion system (T2SS), protein I CV094_RS01685 PF01026 TatD related DNase CV094_RS01695 PF09115 DNA polymerase III, delta subunit, C terminal CV094_RS01700 PF02348 Cytidylyltransferase CV094_RS01705 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CV094_RS01710 PF00005 ABC transporter CV094_RS01710 PF00664 ABC transporter transmembrane region CV094_RS01720 PF01618 MotA/TolQ/ExbB proton channel family CV094_RS01725 PF17762 HTH domain found in ParB protein CV094_RS01725 PF02195 ParB-like nuclease domain CV094_RS01730 PF13614 AAA domain CV094_RS01735 PF02527 rRNA small subunit methyltransferase G CV094_RS01740 PF00483 Nucleotidyl transferase CV094_RS01745 PF01636 Phosphotransferase enzyme family CV094_RS01750 PF03968 OstA-like protein CV094_RS01750 PF04453 LPS transport system D CV094_RS01755 PF09312 SurA N-terminal domain CV094_RS01755 PF00639 PPIC-type PPIASE domain CV094_RS01760 PF01116 Fructose-bisphosphate aldolase class-II CV094_RS01770 PF00162 Phosphoglycerate kinase CV094_RS01780 PF02545 Maf-like protein CV094_RS01785 PF08007 Cupin superfamily protein CV094_RS01800 PF00375 Sodium:dicarboxylate symporter family CV094_RS01805 PF06912 Protein of unknown function (DUF1275) CV094_RS01810 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) CV094_RS01815 PF00005 ABC transporter CV094_RS01815 PF00664 ABC transporter transmembrane region CV094_RS01825 PF12833 Helix-turn-helix domain CV094_RS01825 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CV094_RS01830 PF01597 Glycine cleavage H-protein CV094_RS01835 PF02146 Sir2 family CV094_RS01840 PF00474 Sodium:solute symporter family CV094_RS01845 PF01037 Lrp/AsnC ligand binding domain CV094_RS01850 PF00171 Aldehyde dehydrogenase family CV094_RS01850 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CV094_RS01850 PF14850 DNA-binding domain of Proline dehydrogenase CV094_RS01850 PF01619 Proline dehydrogenase CV094_RS01855 PF04229 GrpB protein CV094_RS01860 PF05958 tRNA (Uracil-5-)-methyltransferase CV094_RS01870 PF09992 Phosphodiester glycosidase CV094_RS01880 PF04264 YceI-like domain CV094_RS01890 PF02779 Transketolase, pyrimidine binding domain CV094_RS01890 PF02780 Transketolase, C-terminal domain CV094_RS01890 PF00456 Transketolase, thiamine diphosphate binding domain CV094_RS01895 PF00438 S-adenosylmethionine synthetase, N-terminal domain CV094_RS01895 PF02772 S-adenosylmethionine synthetase, central domain CV094_RS01895 PF02773 S-adenosylmethionine synthetase, C-terminal domain CV094_RS01915 PF00905 Penicillin binding protein transpeptidase domain CV094_RS01930 PF02075 Crossover junction endodeoxyribonuclease RuvC CV094_RS01935 PF03853 YjeF-related protein N-terminus CV094_RS01935 PF01256 Carbohydrate kinase CV094_RS01940 PF08331 Domain of unknown function (DUF1730) CV094_RS01945 PF04055 Radical SAM superfamily CV094_RS01945 PF06968 Biotin and Thiamin Synthesis associated domain CV094_RS01960 PF16970 Type-1 fimbrial protein, A CV094_RS01965 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CV094_RS01965 PF02753 Pili assembly chaperone PapD, C-terminal domain CV094_RS01970 PF13737 Transposase DDE domain CV094_RS01975 PF00577 Outer membrane usher protein CV094_RS01975 PF13953 PapC C-terminal domain CV094_RS01975 PF13954 PapC N-terminal domain CV094_RS02000 PF00892 EamA-like transporter family CV094_RS02010 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CV094_RS02020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CV094_RS02020 PF03466 LysR substrate binding domain CV094_RS02040 PF00440 Bacterial regulatory proteins, tetR family CV094_RS02050 PF01709 Transcriptional regulator CV094_RS02065 PF01037 Lrp/AsnC ligand binding domain CV094_RS02075 PF00005 ABC transporter CV094_RS02080 PF00528 Binding-protein-dependent transport system inner membrane component CV094_RS02085 PF00528 Binding-protein-dependent transport system inner membrane component CV094_RS02100 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CV094_RS02100 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CV094_RS02110 PF00296 Luciferase-like monooxygenase CV094_RS02115 PF03180 NLPA lipoprotein CV094_RS02120 PF03180 NLPA lipoprotein CV094_RS02125 PF00005 ABC transporter CV094_RS02125 PF09383 NIL domain CV094_RS02130 PF00528 Binding-protein-dependent transport system inner membrane component CV094_RS02135 PF01926 50S ribosome-binding GTPase CV094_RS02135 PF06071 Protein of unknown function (DUF933) CV094_RS02160 PF03591 AzlC protein CV094_RS02165 PF05437 Branched-chain amino acid transport protein (AzlD) CV094_RS02175 PF02222 ATP-grasp domain CV094_RS02180 PF01966 HD domain CV094_RS02180 PF08335 GlnD PII-uridylyltransferase CV094_RS02180 PF01909 Nucleotidyltransferase domain CV094_RS02185 PF00155 Aminotransferase class I and II CV094_RS02195 PF12833 Helix-turn-helix domain CV094_RS02195 PF12852 Cupin CV094_RS02200 PF00255 Glutathione peroxidase CV094_RS02205 PF01641 SelR domain CV094_RS02210 PF00155 Aminotransferase class I and II CV094_RS02215 PF00375 Sodium:dicarboxylate symporter family CV094_RS02220 PF00710 Asparaginase, N-terminal CV094_RS02220 PF17763 Glutaminase/Asparaginase C-terminal domain CV094_RS02225 PF07733 Bacterial DNA polymerase III alpha NTPase domain CV094_RS02225 PF02811 PHP domain CV094_RS02225 PF14579 Helix-hairpin-helix motif CV094_RS02225 PF01336 OB-fold nucleic acid binding domain CV094_RS02225 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CV094_RS02230 PF00588 SpoU rRNA Methylase family CV094_RS02235 PF00132 Bacterial transferase hexapeptide (six repeats) CV094_RS02250 PF07992 Pyridine nucleotide-disulphide oxidoreductase CV094_RS02250 PF13192 Thioredoxin domain CV094_RS02265 PF03466 LysR substrate binding domain CV094_RS02265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CV094_RS02270 PF01758 Sodium Bile acid symporter family CV094_RS02275 PF01022 Bacterial regulatory protein, arsR family CV094_RS02280 PF03960 ArsC family CV094_RS02290 PF01979 Amidohydrolase family CV094_RS02290 PF13382 Adenine deaminase C-terminal domain CV094_RS02300 PF03466 LysR substrate binding domain CV094_RS02300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CV094_RS02310 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CV094_RS02315 PF01177 Asp/Glu/Hydantoin racemase CV094_RS02320 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CV094_RS02325 PF00528 Binding-protein-dependent transport system inner membrane component CV094_RS02330 PF00005 ABC transporter CV094_RS02335 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CV094_RS02345 PF00083 Sugar (and other) transporter CV094_RS02350 PF00296 Luciferase-like monooxygenase CV094_RS02355 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CV094_RS02355 PF02770 Acyl-CoA dehydrogenase, middle domain CV094_RS02355 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CV094_RS02370 PF01654 Cytochrome bd terminal oxidase subunit I CV094_RS02375 PF02322 Cytochrome bd terminal oxidase subunit II CV094_RS02385 PF00155 Aminotransferase class I and II CV094_RS02385 PF00392 Bacterial regulatory proteins, gntR family CV094_RS02390 PF03466 LysR substrate binding domain CV094_RS02390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CV094_RS02405 PF00698 Acyl transferase domain CV094_RS02410 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG CV094_RS02420 PF01039 Carboxyl transferase domain CV094_RS02425 PF06857 Malonate decarboxylase delta subunit (MdcD) CV094_RS02430 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase CV094_RS02435 PF16957 Malonate decarboxylase, alpha subunit, transporter CV094_RS02440 PF07690 Major Facilitator Superfamily CV094_RS02455 PF00392 Bacterial regulatory proteins, gntR family CV094_RS02455 PF00155 Aminotransferase class I and II CV094_RS02460 PF04172 LrgB-like family CV094_RS02465 PF03788 LrgA family CV094_RS02470 PF03466 LysR substrate binding domain CV094_RS02470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CV094_RS02475 PF02798 Glutathione S-transferase, N-terminal domain CV094_RS02475 PF14834 Glutathione S-transferase, C-terminal domain CV094_RS02480 PF02798 Glutathione S-transferase, N-terminal domain CV094_RS02485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CV094_RS02485 PF03466 LysR substrate binding domain CV094_RS02495 PF00581 Rhodanese-like domain CV094_RS02500 PF00132 Bacterial transferase hexapeptide (six repeats) CV094_RS02510 PF00266 Aminotransferase class-V CV094_RS02520 PF01810 LysE type translocator CV094_RS02525 PF03466 LysR substrate binding domain CV094_RS02525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CV094_RS02535 PF00497 Bacterial extracellular solute-binding proteins, family 3 CV094_RS02540 PF00497 Bacterial extracellular solute-binding proteins, family 3 CV094_RS02545 PF00005 ABC transporter CV094_RS02550 PF00528 Binding-protein-dependent transport system inner membrane component CV094_RS02555 PF00528 Binding-protein-dependent transport system inner membrane component CV094_RS02570 PF00072 Response regulator receiver domain CV094_RS02575 PF00072 Response regulator receiver domain CV094_RS02575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CV094_RS02575 PF00512 His Kinase A (phospho-acceptor) domain CV094_RS02575 PF09308 LuxQ, periplasmic CV094_RS02585 PF01037 Lrp/AsnC ligand binding domain CV094_RS02585 PF13404 AsnC-type helix-turn-helix domain CV094_RS02600 PF00717 Peptidase S24-like CV094_RS02625 PF13737 Transposase DDE domain CV094_RS02635 PF00199 Catalase CV094_RS02635 PF18011 C-terminal domain found in long catalases CV094_RS02635 PF06628 Catalase-related immune-responsive CV094_RS02645 PF02464 Competence-damaged protein CV094_RS02645 PF18146 Damage-inducible protein CinA KH domain CV094_RS02645 PF00994 Probable molybdopterin binding domain CV094_RS02675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CV094_RS02675 PF03466 LysR substrate binding domain CV094_RS02695 PF13193 AMP-binding enzyme C-terminal domain CV094_RS02695 PF00501 AMP-binding enzyme CV094_RS02700 PF00440 Bacterial regulatory proteins, tetR family CV094_RS02705 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CV094_RS02705 PF02770 Acyl-CoA dehydrogenase, middle domain CV094_RS02705 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CV094_RS02710 PF01039 Carboxyl transferase domain CV094_RS02715 PF00378 Enoyl-CoA hydratase/isomerase CV094_RS02720 PF02785 Biotin carboxylase C-terminal domain CV094_RS02720 PF18140 Propionyl-coenzyme A carboxylase BT domain CV094_RS02720 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CV094_RS02720 PF00364 Biotin-requiring enzyme CV094_RS02720 PF00289 Biotin carboxylase, N-terminal domain CV094_RS02725 PF00682 HMGL-like CV094_RS02730 PF03466 LysR substrate binding domain CV094_RS02730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CV094_RS02745 PF02770 Acyl-CoA dehydrogenase, middle domain CV094_RS02745 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CV094_RS02745 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CV094_RS02745 PF12806 Acetyl-CoA dehydrogenase C-terminal like CV094_RS02755 PF07690 Major Facilitator Superfamily CV094_RS02765 PF01144 Coenzyme A transferase CV094_RS02770 PF01144 Coenzyme A transferase CV094_RS02775 PF07690 Major Facilitator Superfamily CV094_RS02780 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CV094_RS02780 PF02770 Acyl-CoA dehydrogenase, middle domain CV094_RS02780 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CV094_RS02785 PF00378 Enoyl-CoA hydratase/isomerase CV094_RS02795 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain CV094_RS02795 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CV094_RS02795 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CV094_RS02800 PF00108 Thiolase, N-terminal domain CV094_RS02800 PF02803 Thiolase, C-terminal domain CV094_RS02805 PF09339 IclR helix-turn-helix domain CV094_RS02810 PF07690 Major Facilitator Superfamily CV094_RS02815 PF03060 Nitronate monooxygenase CV094_RS02820 PF00378 Enoyl-CoA hydratase/isomerase CV094_RS02825 PF09339 IclR helix-turn-helix domain CV094_RS02830 PF02515 CoA-transferase family III CV094_RS02835 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CV094_RS02835 PF02770 Acyl-CoA dehydrogenase, middle domain CV094_RS02835 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CV094_RS02840 PF07690 Major Facilitator Superfamily CV094_RS02845 PF13419 Haloacid dehalogenase-like hydrolase CV094_RS02850 PF00266 Aminotransferase class-V CV094_RS02855 PF01266 FAD dependent oxidoreductase CV094_RS02860 PF00528 Binding-protein-dependent transport system inner membrane component CV094_RS02865 PF08402 TOBE domain CV094_RS02865 PF00005 ABC transporter CV094_RS02875 PF00392 Bacterial regulatory proteins, gntR family CV094_RS02875 PF07702 UTRA domain CV094_RS02880 PF01494 FAD binding domain CV094_RS02885 PF01614 Bacterial transcriptional regulator CV094_RS02885 PF09339 IclR helix-turn-helix domain CV094_RS02890 PF02525 Flavodoxin-like fold CV094_RS02895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CV094_RS02895 PF03466 LysR substrate binding domain CV094_RS02900 PF02627 Carboxymuconolactone decarboxylase family CV094_RS02905 PF00171 Aldehyde dehydrogenase family CV094_RS02915 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CV094_RS02925 PF00171 Aldehyde dehydrogenase family CV094_RS02930 PF00296 Luciferase-like monooxygenase CV094_RS02935 PF01613 Flavin reductase like domain CV094_RS02940 PF12697 Alpha/beta hydrolase family CV094_RS02960 PF01292 Prokaryotic cytochrome b561 CV094_RS02965 PF00199 Catalase CV094_RS03005 PF03061 Thioesterase superfamily CV094_RS03010 PF00132 Bacterial transferase hexapeptide (six repeats) CV094_RS03015 PF08223 PaaX-like protein C-terminal domain CV094_RS03015 PF07848 PaaX-like protein CV094_RS03020 PF00501 AMP-binding enzyme CV094_RS03020 PF14535 AMP-binding enzyme C-terminal domain CV094_RS03025 PF02803 Thiolase, C-terminal domain CV094_RS03025 PF00108 Thiolase, N-terminal domain CV094_RS03030 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain CV094_RS03030 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CV094_RS03030 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CV094_RS03035 PF00378 Enoyl-CoA hydratase/isomerase CV094_RS03040 PF00378 Enoyl-CoA hydratase/isomerase CV094_RS03045 PF00970 Oxidoreductase FAD-binding domain CV094_RS03045 PF00175 Oxidoreductase NAD-binding domain CV094_RS03045 PF00111 2Fe-2S iron-sulfur cluster binding domain CV094_RS03050 PF01883 Iron-sulfur cluster assembly protein CV094_RS03055 PF05138 Phenylacetic acid catabolic protein CV094_RS03060 PF06243 Phenylacetic acid degradation B CV094_RS03065 PF05138 Phenylacetic acid catabolic protein CV094_RS03070 PF01575 MaoC like domain CV094_RS03070 PF00171 Aldehyde dehydrogenase family CV094_RS03075 PF03315 Serine dehydratase beta chain CV094_RS03075 PF03313 Serine dehydratase alpha chain CV094_RS03080 PF13520 Amino acid permease CV094_RS03085 PF00171 Aldehyde dehydrogenase family CV094_RS03090 PF00083 Sugar (and other) transporter CV094_RS03100 PF04324 BFD-like [2Fe-2S] binding domain CV094_RS03100 PF07992 Pyridine nucleotide-disulphide oxidoreductase CV094_RS03110 PF01266 FAD dependent oxidoreductase CV094_RS03115 PF05544 Proline racemase CV094_RS03120 PF00392 Bacterial regulatory proteins, gntR family CV094_RS03130 PF00701 Dihydrodipicolinate synthetase family CV094_RS03145 PF00376 MerR family regulatory protein CV094_RS03145 PF09278 MerR, DNA binding CV094_RS03170 PF00005 ABC transporter CV094_RS03175 PF00497 Bacterial extracellular solute-binding proteins, family 3 CV094_RS03180 PF01425 Amidase CV094_RS03185 PF01402 Ribbon-helix-helix protein, copG family CV094_RS03185 PF08753 NikR C terminal nickel binding domain CV094_RS03205 PF02525 Flavodoxin-like fold CV094_RS03210 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CV094_RS03210 PF00289 Biotin carboxylase, N-terminal domain CV094_RS03210 PF02785 Biotin carboxylase C-terminal domain CV094_RS03225 PF13823 Alcohol dehydrogenase GroES-associated CV094_RS03225 PF00107 Zinc-binding dehydrogenase CV094_RS03225 PF08240 Alcohol dehydrogenase GroES-like domain CV094_RS03235 PF00440 Bacterial regulatory proteins, tetR family CV094_RS03265 PF13610 DDE domain CV094_RS03290 PF03050 Transposase IS66 family CV094_RS03290 PF13817 IS66 C-terminal element CV094_RS03290 PF13007 Transposase C of IS166 homeodomain CV094_RS03290 PF13005 zinc-finger binding domain of transposase IS66 CV094_RS03300 PF01636 Phosphotransferase enzyme family CV094_RS03305 PF00005 ABC transporter CV094_RS03305 PF12848 ABC transporter CV094_RS03325 PF07091 Ribosomal RNA methyltransferase (FmrO) CV094_RS03345 PF00809 Pterin binding enzyme CV094_RS03350 PF00893 Small Multidrug Resistance protein CV094_RS03355 PF13427 Domain of unknown function (DUF4111) CV094_RS03355 PF01909 Nucleotidyltransferase domain CV094_RS03360 PF00132 Bacterial transferase hexapeptide (six repeats) CV094_RS03375 PF13610 DDE domain CV094_RS03390 PF13610 DDE domain CV094_RS03400 PF07995 Glucose / Sorbosone dehydrogenase CV094_RS03405 PF00892 EamA-like transporter family CV094_RS03410 PF01177 Asp/Glu/Hydantoin racemase CV094_RS03420 PF02470 MlaD protein CV094_RS03425 PF04403 Paraquat-inducible protein A CV094_RS03435 PF02080 TrkA-C domain CV094_RS03435 PF06826 Predicted Permease Membrane Region CV094_RS03440 PF00155 Aminotransferase class I and II CV094_RS03465 PF00083 Sugar (and other) transporter CV094_RS03465 PF08946 Osmosensory transporter coiled coil CV094_RS03515 PF00392 Bacterial regulatory proteins, gntR family CV094_RS03515 PF07729 FCD domain CV094_RS03525 PF03616 Sodium/glutamate symporter CV094_RS03530 PF00561 alpha/beta hydrolase fold CV094_RS03555 PF04076 Bacterial OB fold (BOF) protein CV094_RS03580 PF13737 Transposase DDE domain CV094_RS03590 PF00324 Amino acid permease CV094_RS03595 PF00171 Aldehyde dehydrogenase family CV094_RS03600 PF00202 Aminotransferase class-III CV094_RS03605 PF03466 LysR substrate binding domain CV094_RS03605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CV094_RS03630 PF00069 Protein kinase domain CV094_RS03650 PF00814 Glycoprotease family CV094_RS03655 PF01165 Ribosomal protein S21 CV094_RS03660 PF09424 Yqey-like protein CV094_RS03665 PF01435 Peptidase family M48 CV094_RS03670 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CV094_RS03670 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CV094_RS03685 PF00156 Phosphoribosyl transferase domain CV094_RS03690 PF02674 Colicin V production protein CV094_RS03695 PF01180 Dihydroorotate dehydrogenase CV094_RS03715 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CV094_RS03715 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CV094_RS03720 PF00881 Nitroreductase family CV094_RS03730 PF00271 Helicase conserved C-terminal domain CV094_RS03730 PF00270 DEAD/DEAH box helicase CV094_RS03735 PF00313 'Cold-shock' DNA-binding domain CV094_RS03745 PF00140 Sigma-70 factor, region 1.2 CV094_RS03745 PF04542 Sigma-70 region 2 CV094_RS03745 PF04545 Sigma-70, region 4 CV094_RS03750 PF04241 Protein of unknown function (DUF423) CV094_RS03760 PF05690 Thiazole biosynthesis protein ThiG CV094_RS03770 PF03883 Peroxide stress protein YaaA CV094_RS03780 PF12706 Beta-lactamase superfamily domain CV094_RS03785 PF07687 Peptidase dimerisation domain CV094_RS03785 PF01546 Peptidase family M20/M25/M40 CV094_RS03795 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CV094_RS03800 PF01842 ACT domain CV094_RS03800 PF01817 Chorismate mutase type II CV094_RS03800 PF00800 Prephenate dehydratase CV094_RS03805 PF00756 Putative esterase CV094_RS03810 PF02770 Acyl-CoA dehydrogenase, middle domain CV094_RS03810 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CV094_RS03810 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CV094_RS03815 PF00375 Sodium:dicarboxylate symporter family CV094_RS03825 PF02885 Glycosyl transferase family, helical bundle domain CV094_RS03825 PF00591 Glycosyl transferase family, a/b domain CV094_RS03830 PF07023 Protein of unknown function (DUF1315) CV094_RS03835 PF01513 ATP-NAD kinase CV094_RS03840 PF00905 Penicillin binding protein transpeptidase domain CV094_RS03840 PF14814 Bifunctional transglycosylase second domain CV094_RS03840 PF00912 Transglycosylase CV094_RS03850 PF00293 NUDIX domain CV094_RS03860 PF08521 Two-component sensor kinase N-terminal CV094_RS03860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CV094_RS03860 PF00512 His Kinase A (phospho-acceptor) domain CV094_RS03865 PF00072 Response regulator receiver domain CV094_RS03865 PF00486 Transcriptional regulatory protein, C terminal CV094_RS03875 PF00437 Type II/IV secretion system protein CV094_RS03875 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CV094_RS03885 PF01980 tRNA-methyltransferase O CV094_RS03885 PF18389 TrmO C-terminal domain CV094_RS03890 PF00175 Oxidoreductase NAD-binding domain CV094_RS03890 PF00970 Oxidoreductase FAD-binding domain CV094_RS03895 PF02567 Phenazine biosynthesis-like protein CV094_RS03900 PF00155 Aminotransferase class I and II CV094_RS03900 PF00392 Bacterial regulatory proteins, gntR family CV094_RS03905 PF16325 Peptidase family U32 C-terminal domain CV094_RS03905 PF01136 Peptidase family U32 CV094_RS03910 PF00037 4Fe-4S binding domain CV094_RS03915 PF00893 Small Multidrug Resistance protein CV094_RS03920 PF00005 ABC transporter CV094_RS03925 PF00528 Binding-protein-dependent transport system inner membrane component CV094_RS03930 PF00528 Binding-protein-dependent transport system inner membrane component CV094_RS03935 PF00497 Bacterial extracellular solute-binding proteins, family 3 CV094_RS03940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CV094_RS03940 PF03466 LysR substrate binding domain CV094_RS03945 PF13533 Biotin-lipoyl like CV094_RS03950 PF00873 AcrB/AcrD/AcrF family CV094_RS03955 PF02321 Outer membrane efflux protein CV094_RS03960 PF00464 Serine hydroxymethyltransferase CV094_RS03990 PF00005 ABC transporter CV094_RS03995 PF01061 ABC-2 type transporter CV094_RS04000 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CV094_RS04000 PF14489 QueF-like protein CV094_RS04010 PF01098 Cell cycle protein CV094_RS04015 PF13406 Transglycosylase SLT domain CV094_RS04020 PF05036 Sporulation related domain CV094_RS04020 PF03330 Lytic transglycolase CV094_RS04040 PF12833 Helix-turn-helix domain CV094_RS04050 PF00889 Elongation factor TS CV094_RS04055 PF00318 Ribosomal protein S2 CV094_RS04060 PF00557 Metallopeptidase family M24 CV094_RS04070 PF07690 Major Facilitator Superfamily CV094_RS04080 PF07992 Pyridine nucleotide-disulphide oxidoreductase CV094_RS04080 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CV094_RS04085 PF04055 Radical SAM superfamily CV094_RS04090 PF09317 Domain of unknown function (DUF1974) CV094_RS04090 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CV094_RS04090 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CV094_RS04105 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CV094_RS04105 PF05221 S-adenosyl-L-homocysteine hydrolase CV094_RS04110 PF02219 Methylenetetrahydrofolate reductase CV094_RS04115 PF04452 RNA methyltransferase CV094_RS04120 PF00563 EAL domain CV094_RS04120 PF00990 Diguanylate cyclase, GGDEF domain CV094_RS04120 PF03707 Bacterial signalling protein N terminal repeat CV094_RS04125 PF01515 Phosphate acetyl/butaryl transferase CV094_RS04125 PF03949 Malic enzyme, NAD binding domain CV094_RS04125 PF00390 Malic enzyme, N-terminal domain CV094_RS04130 PF12627 Probable RNA and SrmB- binding site of polymerase A CV094_RS04130 PF01743 Poly A polymerase head domain CV094_RS04135 PF13180 PDZ domain CV094_RS04140 PF01784 NIF3 (NGG1p interacting factor 3) CV094_RS04145 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CV094_RS04145 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CV094_RS04180 PF01040 UbiA prenyltransferase family CV094_RS04185 PF04345 Chorismate lyase CV094_RS04190 PF03951 Glutamine synthetase, beta-Grasp domain CV094_RS04190 PF00120 Glutamine synthetase, catalytic domain CV094_RS04195 PF00854 POT family CV094_RS04205 PF00117 Glutamine amidotransferase class-I CV094_RS04210 PF11838 ERAP1-like C-terminal domain CV094_RS04210 PF01433 Peptidase family M1 domain CV094_RS04215 PF00593 TonB dependent receptor CV094_RS04215 PF07715 TonB-dependent Receptor Plug Domain CV094_RS04220 PF00591 Glycosyl transferase family, a/b domain CV094_RS04220 PF02885 Glycosyl transferase family, helical bundle domain CV094_RS04225 PF00218 Indole-3-glycerol phosphate synthase CV094_RS04240 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CV094_RS04240 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CV094_RS04245 PF00111 2Fe-2S iron-sulfur cluster binding domain CV094_RS04245 PF01799 [2Fe-2S] binding domain CV094_RS04250 PF01227 GTP cyclohydrolase I CV094_RS04260 PF00144 Beta-lactamase CV094_RS04275 PF05675 Protein of unknown function (DUF817) CV094_RS04280 PF01208 Uroporphyrinogen decarboxylase (URO-D) CV094_RS04295 PF00425 chorismate binding enzyme CV094_RS04305 PF00975 Thioesterase domain CV094_RS04310 PF00005 ABC transporter CV094_RS04315 PF00005 ABC transporter CV094_RS04325 PF00282 Pyridoxal-dependent decarboxylase conserved domain CV094_RS04330 PF00550 Phosphopantetheine attachment site CV094_RS04330 PF00857 Isochorismatase family CV094_RS04335 PF13193 AMP-binding enzyme C-terminal domain CV094_RS04335 PF00501 AMP-binding enzyme CV094_RS04340 PF00501 AMP-binding enzyme CV094_RS04340 PF00668 Condensation domain CV094_RS04340 PF00550 Phosphopantetheine attachment site CV094_RS04345 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) CV094_RS04350 PF00593 TonB dependent receptor CV094_RS04350 PF07715 TonB-dependent Receptor Plug Domain CV094_RS04355 PF01497 Periplasmic binding protein CV094_RS04360 PF00005 ABC transporter CV094_RS04365 PF01032 FecCD transport family CV094_RS04370 PF01032 FecCD transport family CV094_RS04375 PF00550 Phosphopantetheine attachment site CV094_RS04375 PF13193 AMP-binding enzyme C-terminal domain CV094_RS04375 PF00501 AMP-binding enzyme CV094_RS04375 PF00975 Thioesterase domain CV094_RS04375 PF00668 Condensation domain CV094_RS04380 PF13193 AMP-binding enzyme C-terminal domain CV094_RS04380 PF00668 Condensation domain CV094_RS04380 PF00550 Phosphopantetheine attachment site CV094_RS04380 PF00501 AMP-binding enzyme CV094_RS04390 PF13309 HTH domain CV094_RS04390 PF08348 YheO-like PAS domain CV094_RS04400 PF17954 Quercetinase C-terminal cupin domain CV094_RS04400 PF02678 Pirin CV094_RS04420 PF00440 Bacterial regulatory proteins, tetR family CV094_RS04425 PF00109 Beta-ketoacyl synthase, N-terminal domain CV094_RS04425 PF08659 KR domain CV094_RS04425 PF00550 Phosphopantetheine attachment site CV094_RS04425 PF16197 Ketoacyl-synthetase C-terminal extension CV094_RS04425 PF09277 Erythronolide synthase, docking CV094_RS04425 PF14765 Polyketide synthase dehydratase CV094_RS04425 PF02801 Beta-ketoacyl synthase, C-terminal domain CV094_RS04425 PF00698 Acyl transferase domain CV094_RS04425 PF08990 Erythronolide synthase docking CV094_RS04425 PF08240 Alcohol dehydrogenase GroES-like domain CV094_RS04430 PF13378 Enolase C-terminal domain-like CV094_RS04430 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CV094_RS04435 PF00083 Sugar (and other) transporter CV094_RS04440 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system CV094_RS04450 PF00892 EamA-like transporter family CV094_RS04470 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CV094_RS04470 PF01266 FAD dependent oxidoreductase CV094_RS04475 PF07992 Pyridine nucleotide-disulphide oxidoreductase CV094_RS04475 PF18113 Rubredoxin binding C-terminal domain CV094_RS04480 PF00171 Aldehyde dehydrogenase family CV094_RS04485 PF00355 Rieske [2Fe-2S] domain CV094_RS04485 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CV094_RS04490 PF02028 BCCT, betaine/carnitine/choline family transporter CV094_RS04495 PF02028 BCCT, betaine/carnitine/choline family transporter CV094_RS04500 PF13737 Transposase DDE domain CV094_RS04505 PF03466 LysR substrate binding domain CV094_RS04505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CV094_RS04510 PF00324 Amino acid permease CV094_RS04515 PF00171 Aldehyde dehydrogenase family CV094_RS04530 PF06018 CodY GAF-like domain CV094_RS04530 PF13556 PucR C-terminal helix-turn-helix domain CV094_RS04530 PF17853 GGDEF-like domain CV094_RS04565 PF04328 Selenoprotein, putative CV094_RS04570 PF13722 5TM C-terminal transporter carbon starvation CstA CV094_RS04570 PF02554 Carbon starvation protein CstA CV094_RS04575 PF09285 Elongation factor P, C-terminal CV094_RS04575 PF08207 Elongation factor P (EF-P) KOW-like domain CV094_RS04575 PF01132 Elongation factor P (EF-P) OB domain CV094_RS04580 PF04055 Radical SAM superfamily CV094_RS04595 PF01197 Ribosomal protein L31 CV094_RS04600 PF13593 SBF-like CPA transporter family (DUF4137) CV094_RS04605 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CV094_RS04610 PF07690 Major Facilitator Superfamily CV094_RS04615 PF05362 Lon protease (S16) C-terminal proteolytic domain CV094_RS04615 PF13654 AAA domain CV094_RS04620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CV094_RS04620 PF03466 LysR substrate binding domain CV094_RS04625 PF01551 Peptidase family M23 CV094_RS04625 PF01476 LysM domain CV094_RS04630 PF01975 Survival protein SurE CV094_RS04645 PF07943 Penicillin-binding protein 5, C-terminal domain CV094_RS04645 PF00768 D-alanyl-D-alanine carboxypeptidase CV094_RS04650 PF00132 Bacterial transferase hexapeptide (six repeats) CV094_RS04655 PF13344 Haloacid dehalogenase-like hydrolase CV094_RS04655 PF00293 NUDIX domain CV094_RS04665 PF04356 Protein of unknown function (DUF489) CV094_RS04670 PF08328 Adenylosuccinate lyase C-terminal CV094_RS04670 PF00206 Lyase CV094_RS04685 PF08496 Peptidase family S49 N-terminal CV094_RS04685 PF01343 Peptidase family S49 CV094_RS04690 PF00005 ABC transporter CV094_RS04695 PF00528 Binding-protein-dependent transport system inner membrane component CV094_RS04700 PF00528 Binding-protein-dependent transport system inner membrane component CV094_RS04705 PF12849 PBP superfamily domain CV094_RS04710 PF00324 Amino acid permease CV094_RS04715 PF00205 Thiamine pyrophosphate enzyme, central domain CV094_RS04715 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CV094_RS04715 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CV094_RS04720 PF01037 Lrp/AsnC ligand binding domain CV094_RS04725 PF00171 Aldehyde dehydrogenase family CV094_RS04730 PF00282 Pyridoxal-dependent decarboxylase conserved domain CV094_RS04735 PF00202 Aminotransferase class-III CV094_RS04745 PF17754 MftR C-terminal domain CV094_RS04745 PF00440 Bacterial regulatory proteins, tetR family CV094_RS04755 PF00487 Fatty acid desaturase CV094_RS04760 PF00175 Oxidoreductase NAD-binding domain CV094_RS04760 PF00111 2Fe-2S iron-sulfur cluster binding domain CV094_RS04760 PF00970 Oxidoreductase FAD-binding domain CV094_RS04765 PF00440 Bacterial regulatory proteins, tetR family CV094_RS04775 PF18337 RapA N-terminal Tudor like domain CV094_RS04775 PF18339 RapA N-terminal Tudor like domain 1 CV094_RS04775 PF00271 Helicase conserved C-terminal domain CV094_RS04775 PF00176 SNF2 family N-terminal domain CV094_RS04775 PF12137 RNA polymerase recycling family C-terminal CV094_RS04780 PF00849 RNA pseudouridylate synthase CV094_RS04790 PF00202 Aminotransferase class-III CV094_RS04795 PF02581 Thiamine monophosphate synthase CV094_RS04820 PF00675 Insulinase (Peptidase family M16) CV094_RS04820 PF05193 Peptidase M16 inactive domain CV094_RS04825 PF02567 Phenazine biosynthesis-like protein CV094_RS04830 PF00375 Sodium:dicarboxylate symporter family CV094_RS04835 PF03466 LysR substrate binding domain CV094_RS04835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CV094_RS04840 PF06779 Uncharacterised MFS-type transporter YbfB CV094_RS04860 PF00180 Isocitrate/isopropylmalate dehydrogenase CV094_RS04865 PF00849 RNA pseudouridylate synthase CV094_RS04870 PF03971 Monomeric isocitrate dehydrogenase CV094_RS04880 PF07943 Penicillin-binding protein 5, C-terminal domain CV094_RS04880 PF00768 D-alanyl-D-alanine carboxypeptidase CV094_RS04885 PF07992 Pyridine nucleotide-disulphide oxidoreductase CV094_RS04890 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CV094_RS04895 PF03441 FAD binding domain of DNA photolyase CV094_RS04895 PF00875 DNA photolyase CV094_RS04925 PF02350 UDP-N-acetylglucosamine 2-epimerase CV094_RS04940 PF03060 Nitronate monooxygenase CV094_RS04945 PF01207 Dihydrouridine synthase (Dus) CV094_RS04950 PF00589 Phage integrase family CV094_RS05280 PF07759 Protein of unknown function (DUF1615) CV094_RS05290 PF00696 Amino acid kinase family CV094_RS05290 PF01472 PUA domain CV094_RS05295 PF01018 GTP1/OBG CV094_RS05295 PF01926 50S ribosome-binding GTPase CV094_RS05310 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CV094_RS05310 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CV094_RS05315 PF00892 EamA-like transporter family CV094_RS05325 PF12344 Ultra-violet resistance protein B CV094_RS05325 PF02151 UvrB/uvrC motif CV094_RS05325 PF04851 Type III restriction enzyme, res subunit CV094_RS05325 PF00271 Helicase conserved C-terminal domain CV094_RS05325 PF17757 UvrB interaction domain CV094_RS05335 PF17151 Periplasmic sensor domain CV094_RS05335 PF00990 Diguanylate cyclase, GGDEF domain CV094_RS05345 PF00155 Aminotransferase class I and II CV094_RS05375 PF00106 short chain dehydrogenase CV094_RS05380 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) CV094_RS05385 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CV094_RS05390 PF11967 Recombination protein O N terminal CV094_RS05390 PF02565 Recombination protein O C terminal CV094_RS05400 PF01926 50S ribosome-binding GTPase CV094_RS05400 PF07650 KH domain CV094_RS05405 PF14622 Ribonuclease-III-like CV094_RS05405 PF00035 Double-stranded RNA binding motif CV094_RS05415 PF10502 Signal peptidase, peptidase S26 CV094_RS05420 PF00009 Elongation factor Tu GTP binding domain CV094_RS05420 PF00679 Elongation factor G C-terminus CV094_RS05420 PF06421 GTP-binding protein LepA C-terminus CV094_RS05420 PF03144 Elongation factor Tu domain 2 CV094_RS05430 PF13180 PDZ domain CV094_RS05435 PF02910 Fumarate reductase flavoprotein C-term CV094_RS05435 PF00890 FAD binding domain CV094_RS05445 PF02223 Thymidylate kinase CV094_RS05450 PF02618 YceG-like family CV094_RS05455 PF01063 Amino-transferase class IV CV094_RS05470 PF00528 Binding-protein-dependent transport system inner membrane component CV094_RS05475 PF00528 Binding-protein-dependent transport system inner membrane component CV094_RS05480 PF00005 ABC transporter CV094_RS05480 PF12857 TOBE-like domain CV094_RS05485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CV094_RS05485 PF03466 LysR substrate binding domain CV094_RS05495 PF00132 Bacterial transferase hexapeptide (six repeats) CV094_RS05495 PF14602 Hexapeptide repeat of succinyl-transferase CV094_RS05495 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CV094_RS05505 PF06508 Queuosine biosynthesis protein QueC CV094_RS05520 PF00578 AhpC/TSA family CV094_RS05530 PF01467 Cytidylyltransferase-like CV094_RS05530 PF00293 NUDIX domain CV094_RS05535 PF00378 Enoyl-CoA hydratase/isomerase CV094_RS05540 PF01784 NIF3 (NGG1p interacting factor 3) CV094_RS05545 PF07690 Major Facilitator Superfamily CV094_RS05550 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal CV094_RS05550 PF02769 AIR synthase related protein, C-terminal domain CV094_RS05550 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CV094_RS05555 PF01966 HD domain CV094_RS05560 PF07499 RuvA, C-terminal domain CV094_RS05560 PF01330 RuvA N terminal domain CV094_RS05565 PF05491 RuvB C-terminal winged helix domain CV094_RS05565 PF17864 RuvB AAA lid domain CV094_RS05565 PF05496 Holliday junction DNA helicase RuvB P-loop domain CV094_RS05570 PF01546 Peptidase family M20/M25/M40 CV094_RS05570 PF07687 Peptidase dimerisation domain CV094_RS05575 PF03061 Thioesterase superfamily CV094_RS05580 PF01618 MotA/TolQ/ExbB proton channel family CV094_RS05585 PF02472 Biopolymer transport protein ExbD/TolR CV094_RS05595 PF07676 WD40-like Beta Propeller Repeat CV094_RS05595 PF04052 TolB amino-terminal domain CV094_RS05600 PF00691 OmpA family CV094_RS05610 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CV094_RS05615 PF00588 SpoU rRNA Methylase family CV094_RS05615 PF08032 RNA 2'-O ribose methyltransferase substrate binding CV094_RS05655 PF11638 DnaA N-terminal domain CV094_RS05655 PF08299 Bacterial dnaA protein helix-turn-helix CV094_RS05655 PF00308 Bacterial dnaA protein CV094_RS05660 PF01594 AI-2E family transporter CV094_RS05665 PF00586 AIR synthase related protein, N-terminal domain CV094_RS05665 PF02769 AIR synthase related protein, C-terminal domain CV094_RS05670 PF00551 Formyl transferase CV094_RS05675 PF12697 Alpha/beta hydrolase family CV094_RS05680 PF01343 Peptidase family S49 CV094_RS05680 PF06965 Na+/H+ antiporter 1 CV094_RS05690 PF13567 Domain of unknown function (DUF4131) CV094_RS05690 PF03772 Competence protein CV094_RS05690 PF00753 Metallo-beta-lactamase superfamily CV094_RS05695 PF00005 ABC transporter CV094_RS05700 PF12704 MacB-like periplasmic core domain CV094_RS05700 PF02687 FtsX-like permease family CV094_RS05710 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CV094_RS05720 PF00266 Aminotransferase class-V CV094_RS05730 PF13533 Biotin-lipoyl like CV094_RS05750 PF00535 Glycosyl transferase family 2 CV094_RS05765 PF03989 DNA gyrase C-terminal domain, beta-propeller CV094_RS05765 PF00521 DNA gyrase/topoisomerase IV, subunit A CV094_RS05770 PF01012 Electron transfer flavoprotein domain CV094_RS05770 PF00766 Electron transfer flavoprotein FAD-binding domain CV094_RS05775 PF01012 Electron transfer flavoprotein domain CV094_RS05780 PF02899 Phage integrase, N-terminal SAM-like domain CV094_RS05780 PF00589 Phage integrase family CV094_RS05785 PF01810 LysE type translocator CV094_RS05790 PF01678 Diaminopimelate epimerase CV094_RS05795 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CV094_RS05795 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CV094_RS05805 PF00324 Amino acid permease CV094_RS05810 PF18073 Rubredoxin metal binding domain CV094_RS05820 PF00152 tRNA synthetases class II (D, K and N) CV094_RS05825 PF11890 Domain of unknown function (DUF3410) CV094_RS05825 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CV094_RS05825 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CV094_RS05830 PF06803 Protein of unknown function (DUF1232) CV094_RS05835 PF02634 FdhD/NarQ family CV094_RS05840 PF00384 Molybdopterin oxidoreductase CV094_RS05845 PF02595 Glycerate kinase family CV094_RS05860 PF00881 Nitroreductase family CV094_RS05885 PF00550 Phosphopantetheine attachment site CV094_RS05885 PF00668 Condensation domain CV094_RS05885 PF00501 AMP-binding enzyme CV094_RS05885 PF13193 AMP-binding enzyme C-terminal domain CV094_RS05885 PF00975 Thioesterase domain CV094_RS05900 PF03449 Transcription elongation factor, N-terminal CV094_RS05900 PF01272 Transcription elongation factor, GreA/GreB, C-term CV094_RS05905 PF00497 Bacterial extracellular solute-binding proteins, family 3 CV094_RS05905 PF01464 Transglycosylase SLT domain CV094_RS05915 PF01171 PP-loop family CV094_RS05925 PF01464 Transglycosylase SLT domain CV094_RS05930 PF01435 Peptidase family M48 CV094_RS05945 PF03009 Glycerophosphoryl diester phosphodiesterase family CV094_RS05955 PF01219 Prokaryotic diacylglycerol kinase CV094_RS05960 PF00118 TCP-1/cpn60 chaperonin family CV094_RS05965 PF00166 Chaperonin 10 Kd subunit CV094_RS05975 PF00149 Calcineurin-like phosphoesterase CV094_RS05980 PF00781 Diacylglycerol kinase catalytic domain CV094_RS05985 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain CV094_RS05985 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain CV094_RS05990 PF01266 FAD dependent oxidoreductase CV094_RS05990 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CV094_RS05995 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CV094_RS05995 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CV094_RS06000 PF00083 Sugar (and other) transporter CV094_RS06015 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CV094_RS06015 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CV094_RS06030 PF09423 PhoD-like phosphatase CV094_RS06030 PF16655 PhoD-like phosphatase, N-terminal domain CV094_RS06050 PF00809 Pterin binding enzyme CV094_RS06055 PF01434 Peptidase family M41 CV094_RS06055 PF00004 ATPase family associated with various cellular activities (AAA) CV094_RS06055 PF17862 AAA+ lid domain CV094_RS06055 PF06480 FtsH Extracellular CV094_RS06060 PF01728 FtsJ-like methyltransferase CV094_RS06065 PF01985 CRS1 / YhbY (CRM) domain CV094_RS06080 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CV094_RS06080 PF00117 Glutamine amidotransferase class-I CV094_RS06085 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CV094_RS06085 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CV094_RS06085 PF02142 MGS-like domain CV094_RS06090 PF01272 Transcription elongation factor, GreA/GreB, C-term CV094_RS06090 PF03449 Transcription elongation factor, N-terminal CV094_RS06095 PF00132 Bacterial transferase hexapeptide (six repeats) CV094_RS06100 PF00582 Universal stress protein family CV094_RS06105 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CV094_RS06115 PF09587 Bacterial capsule synthesis protein PGA_cap CV094_RS06145 PF00999 Sodium/hydrogen exchanger family CV094_RS06150 PF04228 Putative neutral zinc metallopeptidase CV094_RS06155 PF05661 Protein of unknown function (DUF808) CV094_RS06160 PF00579 tRNA synthetases class I (W and Y) CV094_RS06165 PF00549 CoA-ligase CV094_RS06165 PF02629 CoA binding domain CV094_RS06170 PF00549 CoA-ligase CV094_RS06170 PF08442 ATP-grasp domain CV094_RS06175 PF07992 Pyridine nucleotide-disulphide oxidoreductase CV094_RS06175 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CV094_RS06180 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CV094_RS06180 PF00364 Biotin-requiring enzyme CV094_RS06180 PF02817 e3 binding domain CV094_RS06185 PF16078 2-oxoglutarate dehydrogenase N-terminus CV094_RS06185 PF16870 2-oxoglutarate dehydrogenase C-terminal CV094_RS06185 PF02779 Transketolase, pyrimidine binding domain CV094_RS06185 PF00676 Dehydrogenase E1 component CV094_RS06200 PF13085 2Fe-2S iron-sulfur cluster binding domain CV094_RS06205 PF00890 FAD binding domain CV094_RS06205 PF02910 Fumarate reductase flavoprotein C-term CV094_RS06210 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CV094_RS06215 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CV094_RS06220 PF00285 Citrate synthase, C-terminal domain CV094_RS06230 PF17773 UPF0176 acylphosphatase like domain CV094_RS06230 PF00581 Rhodanese-like domain CV094_RS06250 PF04539 Sigma-70 region 3 CV094_RS06250 PF04545 Sigma-70, region 4 CV094_RS06250 PF00140 Sigma-70 factor, region 1.2 CV094_RS06250 PF03979 Sigma-70 factor, region 1.1 CV094_RS06250 PF04542 Sigma-70 region 2 CV094_RS06250 PF04546 Sigma-70, non-essential region CV094_RS06255 PF04359 Protein of unknown function (DUF493) CV094_RS06260 PF03099 Biotin/lipoate A/B protein ligase family CV094_RS06270 PF00465 Iron-containing alcohol dehydrogenase CV094_RS06275 PF13520 Amino acid permease CV094_RS06280 PF03358 NADPH-dependent FMN reductase CV094_RS06285 PF01638 HxlR-like helix-turn-helix CV094_RS06290 PF00588 SpoU rRNA Methylase family CV094_RS06295 PF14824 Sirohaem biosynthesis protein central CV094_RS06295 PF10414 Sirohaem synthase dimerisation region CV094_RS06295 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CV094_RS06300 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CV094_RS06300 PF02403 Seryl-tRNA synthetase N-terminal domain CV094_RS06310 PF03548 Outer membrane lipoprotein carrier protein LolA CV094_RS06315 PF01016 Ribosomal L27 protein CV094_RS06320 PF00829 Ribosomal prokaryotic L21 protein CV094_RS06330 PF00348 Polyprenyl synthetase CV094_RS06340 PF01569 PAP2 superfamily CV094_RS06345 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CV094_RS06345 PF00529 HlyD membrane-fusion protein of T1SS CV094_RS06350 PF00873 AcrB/AcrD/AcrF family CV094_RS06355 PF02321 Outer membrane efflux protein CV094_RS06360 PF01906 Putative heavy-metal-binding CV094_RS06365 PF01906 Putative heavy-metal-binding CV094_RS06385 PF00133 tRNA synthetases class I (I, L, M and V) CV094_RS06385 PF08264 Anticodon-binding domain of tRNA CV094_RS06385 PF10458 Valyl tRNA synthetase tRNA binding arm CV094_RS06405 PF03466 LysR substrate binding domain CV094_RS06405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CV094_RS06415 PF00909 Ammonium Transporter Family CV094_RS06425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CV094_RS06425 PF00512 His Kinase A (phospho-acceptor) domain CV094_RS06425 PF08521 Two-component sensor kinase N-terminal CV094_RS06430 PF00072 Response regulator receiver domain CV094_RS06430 PF00486 Transcriptional regulatory protein, C terminal CV094_RS06435 PF08019 Phosphoethanolamine transferase EptA/EptB CV094_RS06435 PF00884 Sulfatase CV094_RS06455 PF01734 Patatin-like phospholipase CV094_RS06465 PF01145 SPFH domain / Band 7 family CV094_RS06470 PF04237 YjbR CV094_RS06475 PF00348 Polyprenyl synthetase CV094_RS06480 PF04303 PrpF protein CV094_RS06485 PF00324 Amino acid permease CV094_RS06495 PF01965 DJ-1/PfpI family CV094_RS06500 PF08990 Erythronolide synthase docking CV094_RS06500 PF02801 Beta-ketoacyl synthase, C-terminal domain CV094_RS06500 PF00550 Phosphopantetheine attachment site CV094_RS06500 PF16197 Ketoacyl-synthetase C-terminal extension CV094_RS06500 PF08240 Alcohol dehydrogenase GroES-like domain CV094_RS06500 PF14765 Polyketide synthase dehydratase CV094_RS06500 PF09277 Erythronolide synthase, docking CV094_RS06500 PF08659 KR domain CV094_RS06500 PF00698 Acyl transferase domain CV094_RS06500 PF00109 Beta-ketoacyl synthase, N-terminal domain CV094_RS06505 PF06719 AraC-type transcriptional regulator N-terminus CV094_RS06505 PF12833 Helix-turn-helix domain CV094_RS06510 PF02673 Bacitracin resistance protein BacA CV094_RS06530 PF02525 Flavodoxin-like fold CV094_RS06545 PF01507 Phosphoadenosine phosphosulfate reductase family CV094_RS06550 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain CV094_RS06550 PF06974 Protein of unknown function (DUF1298) CV094_RS06560 PF10150 Ribonuclease E/G family CV094_RS06560 PF00575 S1 RNA binding domain CV094_RS06565 PF02545 Maf-like protein CV094_RS06570 PF04093 rod shape-determining protein MreD CV094_RS06575 PF04085 rod shape-determining protein MreC CV094_RS06585 PF02686 Glu-tRNAGln amidotransferase C subunit CV094_RS06590 PF01425 Amidase CV094_RS06595 PF02637 GatB domain CV094_RS06595 PF02934 GatB/GatE catalytic domain CV094_RS06625 PF05992 SbmA/BacA-like family CV094_RS06630 PF13291 ACT domain CV094_RS06630 PF00291 Pyridoxal-phosphate dependent enzyme CV094_RS06635 PF01734 Patatin-like phospholipase CV094_RS06640 PF01235 Sodium:alanine symporter family CV094_RS06655 PF00881 Nitroreductase family CV094_RS06660 PF07690 Major Facilitator Superfamily CV094_RS06665 PF12805 FUSC-like inner membrane protein yccS CV094_RS06675 PF00667 FAD binding domain CV094_RS06675 PF00175 Oxidoreductase NAD-binding domain CV094_RS06675 PF00258 Flavodoxin CV094_RS06715 PF03734 L,D-transpeptidase catalytic domain CV094_RS06715 PF17969 L,D-transpeptidase C-terminal domain CV094_RS06720 PF04304 Protein of unknown function (DUF454) CV094_RS06730 PF08085 Entericidin EcnA/B family CV094_RS06735 PF01546 Peptidase family M20/M25/M40 CV094_RS06735 PF07687 Peptidase dimerisation domain CV094_RS06745 PF00072 Response regulator receiver domain CV094_RS06745 PF01584 CheW-like domain CV094_RS06745 PF01627 Hpt domain CV094_RS06745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CV094_RS06750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CV094_RS06750 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CV094_RS06755 PF01584 CheW-like domain CV094_RS06760 PF00072 Response regulator receiver domain CV094_RS06765 PF00072 Response regulator receiver domain CV094_RS06780 PF00873 AcrB/AcrD/AcrF family CV094_RS06785 PF03129 Anticodon binding domain CV094_RS06785 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CV094_RS06785 PF04073 Aminoacyl-tRNA editing domain CV094_RS06790 PF07411 Domain of unknown function (DUF1508) CV094_RS06795 PF03831 PhnA domain CV094_RS06795 PF08274 PhnA Zinc-Ribbon CV094_RS06800 PF04343 Protein of unknown function, DUF488 CV094_RS06810 PF01571 Aminomethyltransferase folate-binding domain CV094_RS06815 PF10411 Disulfide bond isomerase protein N-terminus CV094_RS06815 PF13098 Thioredoxin-like domain CV094_RS06825 PF03547 Membrane transport protein CV094_RS06830 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CV094_RS06845 PF00593 TonB dependent receptor CV094_RS06845 PF07715 TonB-dependent Receptor Plug Domain CV094_RS06850 PF02245 Methylpurine-DNA glycosylase (MPG) CV094_RS06855 PF06827 Zinc finger found in FPG and IleRS CV094_RS06855 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CV094_RS06855 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CV094_RS06870 PF01741 Large-conductance mechanosensitive channel, MscL CV094_RS06875 PF00009 Elongation factor Tu GTP binding domain CV094_RS06875 PF00679 Elongation factor G C-terminus CV094_RS06875 PF03144 Elongation factor Tu domain 2 CV094_RS06880 PF00860 Permease family CV094_RS06885 PF08468 Methyltransferase small domain N-terminal CV094_RS06885 PF05175 Methyltransferase small domain CV094_RS06890 PF00324 Amino acid permease CV094_RS06895 PF01139 tRNA-splicing ligase RtcB CV094_RS06905 PF00691 OmpA family CV094_RS06905 PF13505 Outer membrane protein beta-barrel domain CV094_RS06915 PF00108 Thiolase, N-terminal domain CV094_RS06915 PF02803 Thiolase, C-terminal domain CV094_RS06925 PF00893 Small Multidrug Resistance protein CV094_RS06935 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CV094_RS06935 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CV094_RS06940 PF01011 PQQ enzyme repeat CV094_RS06945 PF04966 Carbohydrate-selective porin, OprB family CV094_RS06950 PF02515 CoA-transferase family III CV094_RS06955 PF12833 Helix-turn-helix domain CV094_RS06955 PF02311 AraC-like ligand binding domain CV094_RS06960 PF00108 Thiolase, N-terminal domain CV094_RS06960 PF02803 Thiolase, C-terminal domain CV094_RS06965 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CV094_RS06965 PF00378 Enoyl-CoA hydratase/isomerase CV094_RS06965 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CV094_RS06990 PF03006 Haemolysin-III related CV094_RS06995 PF07690 Major Facilitator Superfamily CV094_RS06995 PF00083 Sugar (and other) transporter CV094_RS07005 PF07516 SecA Wing and Scaffold domain CV094_RS07005 PF01043 SecA preprotein cross-linking domain CV094_RS07005 PF07517 SecA DEAD-like domain CV094_RS07005 PF02810 SEC-C motif CV094_RS07010 PF00578 AhpC/TSA family CV094_RS07010 PF10417 C-terminal domain of 1-Cys peroxiredoxin CV094_RS07015 PF00753 Metallo-beta-lactamase superfamily CV094_RS07030 PF08245 Mur ligase middle domain CV094_RS07030 PF02875 Mur ligase family, glutamate ligase domain CV094_RS07035 PF01039 Carboxyl transferase domain CV094_RS07040 PF00290 Tryptophan synthase alpha chain CV094_RS07065 PF00291 Pyridoxal-phosphate dependent enzyme CV094_RS07070 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CV094_RS07075 PF07715 TonB-dependent Receptor Plug Domain CV094_RS07075 PF00593 TonB dependent receptor CV094_RS07080 PF01923 Cobalamin adenosyltransferase CV094_RS07100 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CV094_RS07105 PF00486 Transcriptional regulatory protein, C terminal CV094_RS07105 PF00072 Response regulator receiver domain CV094_RS07110 PF00672 HAMP domain CV094_RS07110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CV094_RS07110 PF00512 His Kinase A (phospho-acceptor) domain CV094_RS07120 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CV094_RS07120 PF12806 Acetyl-CoA dehydrogenase C-terminal like CV094_RS07120 PF02770 Acyl-CoA dehydrogenase, middle domain CV094_RS07120 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CV094_RS07125 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CV094_RS07125 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CV094_RS07125 PF12806 Acetyl-CoA dehydrogenase C-terminal like CV094_RS07125 PF02770 Acyl-CoA dehydrogenase, middle domain CV094_RS07130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CV094_RS07130 PF03466 LysR substrate binding domain CV094_RS07135 PF00043 Glutathione S-transferase, C-terminal domain CV094_RS07135 PF02798 Glutathione S-transferase, N-terminal domain CV094_RS07140 PF06146 Phosphate-starvation-inducible E CV094_RS07160 PF07715 TonB-dependent Receptor Plug Domain CV094_RS07160 PF00593 TonB dependent receptor CV094_RS07170 PF02938 GAD domain CV094_RS07170 PF00152 tRNA synthetases class II (D, K and N) CV094_RS07170 PF01336 OB-fold nucleic acid binding domain CV094_RS07175 PF17101 Stealth protein CR1, conserved region 1 CV094_RS07175 PF11380 Stealth protein CR2, conserved region 2 CV094_RS07175 PF17102 Stealth protein CR3, conserved region 3 CV094_RS07200 PF13439 Glycosyltransferase Family 4 CV094_RS07200 PF00534 Glycosyl transferases group 1 CV094_RS07205 PF00535 Glycosyl transferase family 2 CV094_RS07210 PF01522 Polysaccharide deacetylase CV094_RS07225 PF01063 Amino-transferase class IV CV094_RS07230 PF03710 Glutamate-ammonia ligase adenylyltransferase CV094_RS07230 PF08335 GlnD PII-uridylyltransferase CV094_RS07235 PF07689 KaiB domain CV094_RS07235 PF00512 His Kinase A (phospho-acceptor) domain CV094_RS07235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CV094_RS07245 PF02547 Queuosine biosynthesis protein CV094_RS07260 PF01702 Queuine tRNA-ribosyltransferase CV094_RS07265 PF02699 Preprotein translocase subunit CV094_RS07270 PF07549 SecD/SecF GG Motif CV094_RS07270 PF02355 Protein export membrane protein CV094_RS07270 PF13721 SecD export protein N-terminal TM region CV094_RS07275 PF07549 SecD/SecF GG Motif CV094_RS07275 PF02355 Protein export membrane protein CV094_RS07280 PF04127 DNA / pantothenate metabolism flavoprotein CV094_RS07280 PF02441 Flavoprotein CV094_RS07285 PF04002 RadC-like JAB domain CV094_RS07290 PF01062 Bestrophin, RFP-TM, chloride channel CV094_RS07295 PF02811 PHP domain CV094_RS07300 PF04279 Intracellular septation protein A CV094_RS07305 PF03795 YCII-related domain CV094_RS07315 PF01266 FAD dependent oxidoreductase CV094_RS07315 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CV094_RS07325 PF04461 Protein of unknown function (DUF520) CV094_RS07335 PF03061 Thioesterase superfamily CV094_RS07340 PF00085 Thioredoxin CV094_RS07345 PF00561 alpha/beta hydrolase fold CV094_RS07350 PF00753 Metallo-beta-lactamase superfamily CV094_RS07350 PF04273 Putative phosphatase (DUF442) CV094_RS07360 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CV094_RS07360 PF07992 Pyridine nucleotide-disulphide oxidoreductase CV094_RS07395 PF17152 Periplasmic sensor domain CV094_RS07395 PF00990 Diguanylate cyclase, GGDEF domain CV094_RS07400 PF01389 OmpA-like transmembrane domain CV094_RS07400 PF00691 OmpA family CV094_RS07405 PF00149 Calcineurin-like phosphoesterase CV094_RS07405 PF10518 TAT (twin-arginine translocation) pathway signal sequence CV094_RS07410 PF13091 PLD-like domain CV094_RS07420 PF01926 50S ribosome-binding GTPase CV094_RS07420 PF13167 GTP-binding GTPase N-terminal CV094_RS07420 PF16360 GTP-binding GTPase Middle Region CV094_RS07440 PF00149 Calcineurin-like phosphoesterase CV094_RS07445 PF00398 Ribosomal RNA adenine dimethylase CV094_RS07450 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CV094_RS07455 PF00572 Ribosomal protein L13 CV094_RS07460 PF00380 Ribosomal protein S9/S16 CV094_RS07465 PF13417 Glutathione S-transferase, N-terminal domain CV094_RS07465 PF00043 Glutathione S-transferase, C-terminal domain CV094_RS07470 PF04386 Stringent starvation protein B CV094_RS07480 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CV094_RS07480 PF00289 Biotin carboxylase, N-terminal domain CV094_RS07480 PF00364 Biotin-requiring enzyme CV094_RS07480 PF02785 Biotin carboxylase C-terminal domain CV094_RS07490 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CV094_RS07490 PF02770 Acyl-CoA dehydrogenase, middle domain CV094_RS07490 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CV094_RS07495 PF01039 Carboxyl transferase domain CV094_RS07510 PF17932 Tetracyclin repressor-like, C-terminal domain CV094_RS07510 PF00440 Bacterial regulatory proteins, tetR family CV094_RS07515 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CV094_RS07515 PF02770 Acyl-CoA dehydrogenase, middle domain CV094_RS07515 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CV094_RS07560 PF01066 CDP-alcohol phosphatidyltransferase CV094_RS07565 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CV094_RS07585 PF00056 lactate/malate dehydrogenase, NAD binding domain CV094_RS07585 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CV094_RS07595 PF01551 Peptidase family M23 CV094_RS07595 PF10145 Phage-related minor tail protein CV094_RS07595 PF01464 Transglycosylase SLT domain CV094_RS07600 PF00919 Uncharacterized protein family UPF0004 CV094_RS07600 PF01938 TRAM domain CV094_RS07600 PF04055 Radical SAM superfamily CV094_RS07605 PF02562 PhoH-like protein CV094_RS07610 PF02130 Uncharacterized protein family UPF0054 CV094_RS07635 PF03358 NADPH-dependent FMN reductase CV094_RS07640 PF03631 Virulence factor BrkB CV094_RS07645 PF00892 EamA-like transporter family CV094_RS07650 PF12833 Helix-turn-helix domain CV094_RS07655 PF01557 Fumarylacetoacetate (FAA) hydrolase family CV094_RS07700 PF17876 Cold shock domain CV094_RS07700 PF08461 Ribonuclease R winged-helix domain CV094_RS07700 PF00773 RNB domain CV094_RS07700 PF00575 S1 RNA binding domain CV094_RS07700 PF08206 Ribonuclease B OB domain CV094_RS07705 PF01432 Peptidase family M3 CV094_RS07710 PF09526 Probable metal-binding protein (DUF2387) CV094_RS07740 PF03937 Flavinator of succinate dehydrogenase CV094_RS07745 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CV094_RS07745 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CV094_RS07745 PF02770 Acyl-CoA dehydrogenase, middle domain CV094_RS07750 PF00743 Flavin-binding monooxygenase-like CV094_RS07755 PF01196 Ribosomal protein L17 CV094_RS07760 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CV094_RS07760 PF01000 RNA polymerase Rpb3/RpoA insert domain CV094_RS07760 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CV094_RS07765 PF00163 Ribosomal protein S4/S9 N-terminal domain CV094_RS07765 PF01479 S4 domain CV094_RS07770 PF00411 Ribosomal protein S11 CV094_RS07775 PF00416 Ribosomal protein S13/S18 CV094_RS07780 PF00444 Ribosomal protein L36 CV094_RS07785 PF00344 SecY translocase CV094_RS07790 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CV094_RS07795 PF00327 Ribosomal protein L30p/L7e CV094_RS07800 PF03719 Ribosomal protein S5, C-terminal domain CV094_RS07800 PF00333 Ribosomal protein S5, N-terminal domain CV094_RS07805 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CV094_RS07810 PF00347 Ribosomal protein L6 CV094_RS07815 PF00410 Ribosomal protein S8 CV094_RS07820 PF00253 Ribosomal protein S14p/S29e CV094_RS07825 PF00281 Ribosomal protein L5 CV094_RS07825 PF00673 ribosomal L5P family C-terminus CV094_RS07830 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CV094_RS07830 PF00467 KOW motif CV094_RS07835 PF00238 Ribosomal protein L14p/L23e CV094_RS07840 PF00366 Ribosomal protein S17 CV094_RS07845 PF00831 Ribosomal L29 protein CV094_RS07850 PF00252 Ribosomal protein L16p/L10e CV094_RS07855 PF00189 Ribosomal protein S3, C-terminal domain CV094_RS07855 PF07650 KH domain CV094_RS07860 PF00237 Ribosomal protein L22p/L17e CV094_RS07865 PF00203 Ribosomal protein S19 CV094_RS07870 PF00181 Ribosomal Proteins L2, RNA binding domain CV094_RS07870 PF03947 Ribosomal Proteins L2, C-terminal domain CV094_RS07875 PF00276 Ribosomal protein L23 CV094_RS07880 PF00573 Ribosomal protein L4/L1 family CV094_RS07885 PF00297 Ribosomal protein L3 CV094_RS07890 PF00338 Ribosomal protein S10p/S20e CV094_RS07895 PF00117 Glutamine amidotransferase class-I CV094_RS07900 PF01053 Cys/Met metabolism PLP-dependent enzyme CV094_RS07905 PF05872 Bacterial protein of unknown function (DUF853) CV094_RS07910 PF00970 Oxidoreductase FAD-binding domain CV094_RS07910 PF00042 Globin CV094_RS07910 PF00175 Oxidoreductase NAD-binding domain CV094_RS07915 PF02082 Transcriptional regulator CV094_RS07920 PF01926 50S ribosome-binding GTPase CV094_RS07930 PF00375 Sodium:dicarboxylate symporter family CV094_RS07940 PF01553 Acyltransferase CV094_RS07955 PF00270 DEAD/DEAH box helicase CV094_RS07955 PF00271 Helicase conserved C-terminal domain CV094_RS07955 PF17191 RecG wedge domain CV094_RS07960 PF00156 Phosphoribosyl transferase domain CV094_RS07965 PF00293 NUDIX domain CV094_RS07970 PF03641 Possible lysine decarboxylase CV094_RS07975 PF01544 CorA-like Mg2+ transporter protein CV094_RS07985 PF05494 MlaC protein CV094_RS07995 PF02405 Permease MlaE CV094_RS08000 PF00005 ABC transporter CV094_RS08005 PF00271 Helicase conserved C-terminal domain CV094_RS08005 PF12343 Cold shock protein DEAD box A CV094_RS08005 PF00270 DEAD/DEAH box helicase CV094_RS08005 PF03880 DbpA RNA binding domain CV094_RS08010 PF00459 Inositol monophosphatase family CV094_RS08015 PF02780 Transketolase, C-terminal domain CV094_RS08015 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CV094_RS08015 PF02779 Transketolase, pyrimidine binding domain CV094_RS08020 PF00925 GTP cyclohydrolase II CV094_RS08025 PF01218 Coproporphyrinogen III oxidase CV094_RS08030 PF01488 Shikimate / quinate 5-dehydrogenase CV094_RS08030 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CV094_RS08030 PF08501 Shikimate dehydrogenase substrate binding domain CV094_RS08040 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CV094_RS08040 PF12806 Acetyl-CoA dehydrogenase C-terminal like CV094_RS08040 PF02770 Acyl-CoA dehydrogenase, middle domain CV094_RS08040 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CV094_RS08050 PF04024 PspC domain CV094_RS08055 PF00571 CBS domain CV094_RS08080 PF02091 Glycyl-tRNA synthetase alpha subunit CV094_RS08085 PF05746 DALR anticodon binding domain CV094_RS08085 PF02092 Glycyl-tRNA synthetase beta subunit CV094_RS08095 PF00892 EamA-like transporter family CV094_RS08100 PF03466 LysR substrate binding domain CV094_RS08100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CV094_RS08115 PF00082 Subtilase family CV094_RS08115 PF05922 Peptidase inhibitor I9 CV094_RS08130 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CV094_RS08135 PF04996 Succinylarginine dihydrolase CV094_RS08140 PF00171 Aldehyde dehydrogenase family CV094_RS08145 PF04958 Arginine N-succinyltransferase beta subunit CV094_RS08150 PF00202 Aminotransferase class-III CV094_RS08155 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CV094_RS08155 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CV094_RS08160 PF00324 Amino acid permease CV094_RS08190 PF13614 AAA domain CV094_RS08195 PF01594 AI-2E family transporter CV094_RS08200 PF00080 Copper/zinc superoxide dismutase (SODC) CV094_RS08205 PF12805 FUSC-like inner membrane protein yccS CV094_RS08210 PF07690 Major Facilitator Superfamily CV094_RS08220 PF02525 Flavodoxin-like fold CV094_RS08225 PF03992 Antibiotic biosynthesis monooxygenase CV094_RS08235 PF02913 FAD linked oxidases, C-terminal domain CV094_RS08235 PF01565 FAD binding domain CV094_RS08240 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CV094_RS08240 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CV094_RS08245 PF00892 EamA-like transporter family CV094_RS08250 PF00892 EamA-like transporter family CV094_RS08260 PF01925 Sulfite exporter TauE/SafE CV094_RS08265 PF01509 TruB family pseudouridylate synthase (N terminal domain) CV094_RS08265 PF16198 tRNA pseudouridylate synthase B C-terminal domain CV094_RS08265 PF09157 Pseudouridine synthase II TruB, C-terminal CV094_RS08270 PF03280 Proteobacterial lipase chaperone protein CV094_RS08275 PF00561 alpha/beta hydrolase fold CV094_RS08280 PF01245 Ribosomal protein L19 CV094_RS08285 PF01746 tRNA (Guanine-1)-methyltransferase CV094_RS08290 PF01782 RimM N-terminal domain CV094_RS08290 PF05239 PRC-barrel domain CV094_RS08295 PF00886 Ribosomal protein S16 CV094_RS08335 PF02401 LytB protein CV094_RS08340 PF00625 Guanylate kinase CV094_RS08345 PF01192 RNA polymerase Rpb6 CV094_RS08355 PF04607 Region found in RelA / SpoT proteins CV094_RS08355 PF02824 TGS domain CV094_RS08355 PF13291 ACT domain CV094_RS08360 PF01042 Endoribonuclease L-PSP CV094_RS08365 PF04324 BFD-like [2Fe-2S] binding domain CV094_RS08370 PF00210 Ferritin-like domain CV094_RS08375 PF04932 O-Antigen ligase CV094_RS08375 PF15864 Protein glycosylation ligase CV094_RS08375 PF11846 Virulence factor membrane-bound polymerase, C-terminal CV094_RS08385 PF07963 Prokaryotic N-terminal methylation motif CV094_RS08385 PF00114 Pilin (bacterial filament) CV094_RS08395 PF04536 TPM domain CV094_RS08400 PF04011 LemA family CV094_RS08410 PF07992 Pyridine nucleotide-disulphide oxidoreductase CV094_RS08410 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CV094_RS08415 PF01493 GXGXG motif CV094_RS08415 PF01645 Conserved region in glutamate synthase CV094_RS08415 PF00310 Glutamine amidotransferases class-II CV094_RS08415 PF04898 Glutamate synthase central domain CV094_RS08425 PF01761 3-dehydroquinate synthase CV094_RS08430 PF01202 Shikimate kinase CV094_RS08435 PF07660 Secretin and TonB N terminus short domain CV094_RS08435 PF03958 Bacterial type II/III secretion system short domain CV094_RS08435 PF00263 Bacterial type II and III secretion system protein CV094_RS08435 PF11741 AMIN domain CV094_RS08445 PF04350 Pilus assembly protein, PilO CV094_RS08450 PF05137 Fimbrial assembly protein (PilN) CV094_RS08455 PF11104 Type IV pilus assembly protein PilM; CV094_RS08460 PF17092 Penicillin-binding protein OB-like domain CV094_RS08460 PF00905 Penicillin binding protein transpeptidase domain CV094_RS08460 PF00912 Transglycosylase CV094_RS08465 PF13847 Methyltransferase domain CV094_RS08475 PF00953 Glycosyl transferase family 4 CV094_RS08480 PF02875 Mur ligase family, glutamate ligase domain CV094_RS08480 PF08245 Mur ligase middle domain CV094_RS08480 PF01225 Mur ligase family, catalytic domain CV094_RS08485 PF01225 Mur ligase family, catalytic domain CV094_RS08485 PF02875 Mur ligase family, glutamate ligase domain CV094_RS08485 PF08245 Mur ligase middle domain CV094_RS08490 PF00905 Penicillin binding protein transpeptidase domain CV094_RS08490 PF03717 Penicillin-binding Protein dimerisation domain CV094_RS08500 PF01795 MraW methylase family CV094_RS08515 PF00749 tRNA synthetases class I (E and Q), catalytic domain CV094_RS08530 PF00324 Amino acid permease CV094_RS08560 PF01545 Cation efflux family CV094_RS08565 PF00873 AcrB/AcrD/AcrF family CV094_RS08570 PF00529 HlyD membrane-fusion protein of T1SS CV094_RS08570 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CV094_RS08590 PF04191 Phospholipid methyltransferase CV094_RS08615 PF00005 ABC transporter CV094_RS08615 PF12848 ABC transporter CV094_RS08620 PF01053 Cys/Met metabolism PLP-dependent enzyme CV094_RS08625 PF00106 short chain dehydrogenase CV094_RS08630 PF00916 Sulfate permease family CV094_RS08630 PF01740 STAS domain CV094_RS08635 PF00575 S1 RNA binding domain CV094_RS08635 PF17674 HHH domain CV094_RS08635 PF09371 Tex-like protein N-terminal domain CV094_RS08635 PF16921 Tex protein YqgF-like domain CV094_RS08640 PF00486 Transcriptional regulatory protein, C terminal CV094_RS08640 PF00072 Response regulator receiver domain CV094_RS08645 PF00512 His Kinase A (phospho-acceptor) domain CV094_RS08645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CV094_RS08645 PF00672 HAMP domain CV094_RS08655 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CV094_RS08655 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CV094_RS08660 PF00583 Acetyltransferase (GNAT) family CV094_RS08680 PF00475 Imidazoleglycerol-phosphate dehydratase CV094_RS08685 PF00117 Glutamine amidotransferase class-I CV094_RS08700 PF00977 Histidine biosynthesis protein CV094_RS08715 PF03992 Antibiotic biosynthesis monooxygenase CV094_RS08730 PF01636 Phosphotransferase enzyme family CV094_RS08735 PF00977 Histidine biosynthesis protein CV094_RS08750 PF00230 Major intrinsic protein CV094_RS08775 PF02705 K+ potassium transporter CV094_RS08795 PF02525 Flavodoxin-like fold CV094_RS08805 PF01638 HxlR-like helix-turn-helix CV094_RS08835 PF02311 AraC-like ligand binding domain CV094_RS08835 PF12833 Helix-turn-helix domain CV094_RS08840 PF00248 Aldo/keto reductase family CV094_RS08860 PF03466 LysR substrate binding domain CV094_RS08860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CV094_RS08865 PF07690 Major Facilitator Superfamily CV094_RS08885 PF01593 Flavin containing amine oxidoreductase CV094_RS08890 PF05726 Pirin C-terminal cupin domain CV094_RS08890 PF02678 Pirin CV094_RS08895 PF00857 Isochorismatase family CV094_RS08900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CV094_RS08905 PF00171 Aldehyde dehydrogenase family CV094_RS08910 PF00202 Aminotransferase class-III CV094_RS08915 PF00155 Aminotransferase class I and II CV094_RS08915 PF00392 Bacterial regulatory proteins, gntR family CV094_RS08920 PF00324 Amino acid permease CV094_RS08930 PF03591 AzlC protein CV094_RS08940 PF00436 Single-strand binding protein family CV094_RS08945 PF07690 Major Facilitator Superfamily CV094_RS08955 PF02581 Thiamine monophosphate synthase CV094_RS08955 PF03070 TENA/THI-4/PQQC family CV094_RS08955 PF08543 Phosphomethylpyrimidine kinase CV094_RS08960 PF06942 GlpM protein CV094_RS08970 PF08240 Alcohol dehydrogenase GroES-like domain CV094_RS08970 PF00107 Zinc-binding dehydrogenase CV094_RS08975 PF00440 Bacterial regulatory proteins, tetR family CV094_RS08975 PF16925 Tetracyclin repressor-like, C-terminal domain CV094_RS08980 PF00005 ABC transporter CV094_RS08980 PF17755 UvrA DNA-binding domain CV094_RS08980 PF17760 UvrA interaction domain CV094_RS08990 PF00990 Diguanylate cyclase, GGDEF domain CV094_RS09000 PF02028 BCCT, betaine/carnitine/choline family transporter CV094_RS09010 PF00474 Sodium:solute symporter family CV094_RS09015 PF04341 Protein of unknown function, DUF485 CV094_RS09020 PF01627 Hpt domain CV094_RS09020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CV094_RS09020 PF00672 HAMP domain CV094_RS09020 PF00512 His Kinase A (phospho-acceptor) domain CV094_RS09020 PF00072 Response regulator receiver domain CV094_RS09030 PF00196 Bacterial regulatory proteins, luxR family CV094_RS09030 PF00072 Response regulator receiver domain CV094_RS09035 PF03358 NADPH-dependent FMN reductase CV094_RS09040 PF00296 Luciferase-like monooxygenase CV094_RS09045 PF00872 Transposase, Mutator family CV094_RS09050 PF01037 Lrp/AsnC ligand binding domain CV094_RS09055 PF00857 Isochorismatase family CV094_RS09060 PF16177 Acetyl-coenzyme A synthetase N-terminus CV094_RS09060 PF13193 AMP-binding enzyme C-terminal domain CV094_RS09060 PF00501 AMP-binding enzyme CV094_RS09070 PF00924 Mechanosensitive ion channel CV094_RS09075 PF04452 RNA methyltransferase CV094_RS09080 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CV094_RS09085 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CV094_RS09105 PF01368 DHH family CV094_RS09105 PF02272 DHHA1 domain CV094_RS09105 PF17768 RecJ OB domain CV094_RS09110 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CV094_RS09110 PF01243 Pyridoxamine 5'-phosphate oxidase CV094_RS09115 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CV094_RS09115 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CV094_RS09115 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CV094_RS09115 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CV094_RS09120 PF00571 CBS domain CV094_RS09120 PF00478 IMP dehydrogenase / GMP reductase domain CV094_RS09125 PF03692 Putative zinc- or iron-chelating domain CV094_RS09130 PF01613 Flavin reductase like domain CV094_RS09130 PF00258 Flavodoxin CV094_RS09135 PF07715 TonB-dependent Receptor Plug Domain CV094_RS09135 PF00593 TonB dependent receptor CV094_RS09140 PF01169 Uncharacterized protein family UPF0016 CV094_RS09150 PF00364 Biotin-requiring enzyme CV094_RS09150 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CV094_RS09150 PF02817 e3 binding domain CV094_RS09155 PF17831 Pyruvate dehydrogenase E1 component middle domain CV094_RS09155 PF00456 Transketolase, thiamine diphosphate binding domain CV094_RS09160 PF01551 Peptidase family M23 CV094_RS09170 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CV094_RS09175 PF00091 Tubulin/FtsZ family, GTPase domain CV094_RS09175 PF12327 FtsZ family, C-terminal domain CV094_RS09180 PF02491 SHS2 domain inserted in FTSA CV094_RS09185 PF08478 POTRA domain, FtsQ-type CV094_RS09185 PF03799 Cell division protein FtsQ CV094_RS09190 PF01820 D-ala D-ala ligase N-terminus CV094_RS09190 PF07478 D-ala D-ala ligase C-terminus CV094_RS09195 PF08245 Mur ligase middle domain CV094_RS09195 PF01225 Mur ligase family, catalytic domain CV094_RS09195 PF02875 Mur ligase family, glutamate ligase domain CV094_RS09200 PF04101 Glycosyltransferase family 28 C-terminal domain CV094_RS09200 PF03033 Glycosyltransferase family 28 N-terminal domain CV094_RS09205 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CV094_RS09205 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CV094_RS09215 PF07715 TonB-dependent Receptor Plug Domain CV094_RS09215 PF00593 TonB dependent receptor CV094_RS09220 PF00156 Phosphoribosyl transferase domain CV094_RS09225 PF03372 Endonuclease/Exonuclease/phosphatase family CV094_RS09230 PF03960 ArsC family CV094_RS09240 PF07859 alpha/beta hydrolase fold CV094_RS09245 PF07694 5TMR of 5TMR-LYT CV094_RS09245 PF00990 Diguanylate cyclase, GGDEF domain CV094_RS09250 PF02683 Cytochrome C biogenesis protein transmembrane region CV094_RS09250 PF11412 Disulphide bond corrector protein DsbC CV094_RS09280 PF00576 HIUase/Transthyretin family CV094_RS09285 PF00860 Permease family CV094_RS09295 PF01494 FAD binding domain CV094_RS09300 PF03561 Allantoicase repeat CV094_RS09305 PF04115 Ureidoglycolate lyase CV094_RS09310 PF00106 short chain dehydrogenase CV094_RS09315 PF00986 DNA gyrase B subunit, carboxyl terminus CV094_RS09315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CV094_RS09315 PF01751 Toprim domain CV094_RS09315 PF00204 DNA gyrase B CV094_RS09320 PF05728 Uncharacterised protein family (UPF0227) CV094_RS09340 PF00877 NlpC/P60 family CV094_RS09340 PF01476 LysM domain CV094_RS09345 PF04717 Type VI secretion system, phage-baseplate injector CV094_RS09345 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) CV094_RS09345 PF13296 Putative type VI secretion system Rhs element Vgr CV094_RS09350 PF02600 Disulfide bond formation protein DsbB CV094_RS09355 PF04262 Glutamate-cysteine ligase CV094_RS09370 PF04286 Protein of unknown function (DUF445) CV094_RS09375 PF00155 Aminotransferase class I and II CV094_RS09380 PF01554 MatE CV094_RS09385 PF00106 short chain dehydrogenase CV094_RS09395 PF00486 Transcriptional regulatory protein, C terminal CV094_RS09395 PF00072 Response regulator receiver domain CV094_RS09400 PF00512 His Kinase A (phospho-acceptor) domain CV094_RS09400 PF00989 PAS fold CV094_RS09400 PF11808 Phosphate regulon sensor protein PhoR CV094_RS09400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CV094_RS09420 PF03069 Acetamidase/Formamidase family CV094_RS09425 PF02666 Phosphatidylserine decarboxylase CV094_RS09430 PF00581 Rhodanese-like domain CV094_RS09435 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CV094_RS09435 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CV094_RS09440 PF02580 D-Tyr-tRNA(Tyr) deacylase CV094_RS09470 PF00925 GTP cyclohydrolase II CV094_RS09470 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CV094_RS09475 PF00885 6,7-dimethyl-8-ribityllumazine synthase CV094_RS09480 PF01029 NusB family CV094_RS09485 PF02769 AIR synthase related protein, C-terminal domain CV094_RS09485 PF00586 AIR synthase related protein, N-terminal domain CV094_RS09490 PF04608 Phosphatidylglycerophosphatase A CV094_RS09495 PF12804 MobA-like NTP transferase domain CV094_RS09495 PF14602 Hexapeptide repeat of succinyl-transferase CV094_RS09495 PF00132 Bacterial transferase hexapeptide (six repeats) CV094_RS09500 PF01380 SIS domain CV094_RS09505 PF01177 Asp/Glu/Hydantoin racemase CV094_RS09520 PF00491 Arginase family CV094_RS09525 PF01979 Amidohydrolase family CV094_RS09530 PF00324 Amino acid permease CV094_RS09535 PF00221 Aromatic amino acid lyase CV094_RS09540 PF01175 Urocanase Rossmann-like domain CV094_RS09540 PF17392 Urocanase C-terminal domain CV094_RS09540 PF17391 Urocanase N-terminal domain CV094_RS09545 PF05962 HutD CV094_RS09550 PF07702 UTRA domain CV094_RS09550 PF00392 Bacterial regulatory proteins, gntR family CV094_RS09560 PF02492 CobW/HypB/UreG, nucleotide-binding domain CV094_RS09560 PF07683 Cobalamin synthesis protein cobW C-terminal domain CV094_RS09570 PF00324 Amino acid permease CV094_RS09580 PF14497 Glutathione S-transferase, C-terminal domain CV094_RS09580 PF02798 Glutathione S-transferase, N-terminal domain CV094_RS09585 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CV094_RS09595 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CV094_RS09600 PF04463 Protein of unknown function (DUF523) CV094_RS09605 PF01554 MatE CV094_RS09610 PF01758 Sodium Bile acid symporter family CV094_RS09615 PF00857 Isochorismatase family CV094_RS09620 PF00701 Dihydrodipicolinate synthetase family CV094_RS09630 PF01259 SAICAR synthetase CV094_RS09640 PF01226 Formate/nitrite transporter CV094_RS09645 PF16193 AAA C-terminal domain CV094_RS09645 PF12002 MgsA AAA+ ATPase C terminal CV094_RS09645 PF00004 ATPase family associated with various cellular activities (AAA) CV094_RS09650 PF07995 Glucose / Sorbosone dehydrogenase CV094_RS09655 PF03692 Putative zinc- or iron-chelating domain CV094_RS09660 PF07043 Protein of unknown function (DUF1328) CV094_RS09675 PF00633 Helix-hairpin-helix motif CV094_RS09675 PF10576 Iron-sulfur binding domain of endonuclease III CV094_RS09675 PF14815 NUDIX domain CV094_RS09675 PF00730 HhH-GPD superfamily base excision DNA repair protein CV094_RS09690 PF03352 Methyladenine glycosylase CV094_RS09695 PF08240 Alcohol dehydrogenase GroES-like domain CV094_RS09695 PF00107 Zinc-binding dehydrogenase CV094_RS09700 PF00155 Aminotransferase class I and II CV094_RS09700 PF00392 Bacterial regulatory proteins, gntR family CV094_RS09715 PF03466 LysR substrate binding domain CV094_RS09715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CV094_RS09720 PF00248 Aldo/keto reductase family CV094_RS09725 PF07690 Major Facilitator Superfamily CV094_RS09735 PF05173 Dihydrodipicolinate reductase, C-terminus CV094_RS09735 PF01113 Dihydrodipicolinate reductase, N-terminus CV094_RS09745 PF01556 DnaJ C terminal domain CV094_RS09745 PF00226 DnaJ domain CV094_RS09745 PF00684 DnaJ central domain CV094_RS09755 PF00873 AcrB/AcrD/AcrF family CV094_RS09760 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CV094_RS09765 PF08361 MAATS-type transcriptional repressor, C-terminal region CV094_RS09765 PF00440 Bacterial regulatory proteins, tetR family CV094_RS09770 PF00311 Phosphoenolpyruvate carboxylase CV094_RS09775 PF00860 Permease family CV094_RS09780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CV094_RS09780 PF03466 LysR substrate binding domain CV094_RS09795 PF00920 Dehydratase family CV094_RS09800 PF00551 Formyl transferase CV094_RS09800 PF02911 Formyl transferase, C-terminal domain CV094_RS09805 PF01029 NusB family CV094_RS09805 PF01189 16S rRNA methyltransferase RsmB/F CV094_RS09870 PF00579 tRNA synthetases class I (W and Y) CV094_RS09875 PF03702 Anhydro-N-acetylmuramic acid kinase CV094_RS09880 PF00561 alpha/beta hydrolase fold CV094_RS09885 PF01521 Iron-sulphur cluster biosynthesis CV094_RS09905 PF12848 ABC transporter CV094_RS09905 PF00005 ABC transporter CV094_RS09910 PF09335 SNARE associated Golgi protein CV094_RS09920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CV094_RS09920 PF01751 Toprim domain CV094_RS09920 PF00986 DNA gyrase B subunit, carboxyl terminus CV094_RS09920 PF00204 DNA gyrase B CV094_RS09920 PF18053 DNA gyrase B subunit insert domain CV094_RS09925 PF02463 RecF/RecN/SMC N terminal domain CV094_RS09930 PF02768 DNA polymerase III beta subunit, C-terminal domain CV094_RS09930 PF02767 DNA polymerase III beta subunit, central domain CV094_RS09930 PF00712 DNA polymerase III beta subunit, N-terminal domain CV094_RS09935 PF08299 Bacterial dnaA protein helix-turn-helix CV094_RS09935 PF00308 Bacterial dnaA protein CV094_RS09935 PF11638 DnaA N-terminal domain CV094_RS09940 PF00468 Ribosomal protein L34 CV094_RS09945 PF00825 Ribonuclease P CV094_RS09950 PF01809 Putative membrane protein insertion efficiency factor CV094_RS09955 PF14849 YidC periplasmic domain CV094_RS09955 PF02096 60Kd inner membrane protein CV094_RS09960 PF12631 MnmE helical domain CV094_RS09960 PF10396 GTP-binding protein TrmE N-terminus CV094_RS09960 PF01926 50S ribosome-binding GTPase CV094_RS09965 PF02583 Metal-sensitive transcriptional repressor CV094_RS09970 PF16916 Dimerisation domain of Zinc Transporter CV094_RS09970 PF01545 Cation efflux family CV094_RS09975 PF10411 Disulfide bond isomerase protein N-terminus CV094_RS09975 PF13098 Thioredoxin-like domain CV094_RS09985 PF00156 Phosphoribosyl transferase domain CV094_RS09990 PF01979 Amidohydrolase family CV094_RS09995 PF00355 Rieske [2Fe-2S] domain CV094_RS10000 PF03738 Glutathionylspermidine synthase preATP-grasp CV094_RS10010 PF03741 Integral membrane protein TerC family CV094_RS10015 PF01569 PAP2 superfamily CV094_RS10025 PF01225 Mur ligase family, catalytic domain CV094_RS10025 PF02875 Mur ligase family, glutamate ligase domain CV094_RS10025 PF08245 Mur ligase middle domain CV094_RS10040 PF00731 AIR carboxylase CV094_RS10045 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CV094_RS10045 PF02222 ATP-grasp domain CV094_RS10050 PF13406 Transglycosylase SLT domain CV094_RS10070 PF00012 Hsp70 protein CV094_RS10075 PF01025 GrpE CV094_RS10100 PF07859 alpha/beta hydrolase fold CV094_RS10105 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CV094_RS10145 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CV094_RS10150 PF01252 Signal peptidase (SPase) II CV094_RS10155 PF06827 Zinc finger found in FPG and IleRS CV094_RS10155 PF00133 tRNA synthetases class I (I, L, M and V) CV094_RS10155 PF08264 Anticodon-binding domain of tRNA CV094_RS10160 PF06574 FAD synthetase CV094_RS10160 PF01687 Riboflavin kinase CV094_RS10170 PF01048 Phosphorylase superfamily CV094_RS10175 PF00440 Bacterial regulatory proteins, tetR family CV094_RS10175 PF08362 YcdC-like protein, C-terminal region CV094_RS10180 PF00005 ABC transporter CV094_RS10185 PF00528 Binding-protein-dependent transport system inner membrane component CV094_RS10195 PF09084 NMT1/THI5 like CV094_RS10200 PF09084 NMT1/THI5 like CV094_RS10205 PF00583 Acetyltransferase (GNAT) family CV094_RS10205 PF00696 Amino acid kinase family CV094_RS10220 PF00106 short chain dehydrogenase CV094_RS10225 PF13419 Haloacid dehalogenase-like hydrolase CV094_RS10235 PF01323 DSBA-like thioredoxin domain CV094_RS10240 PF08360 QacR-like protein, C-terminal region CV094_RS10240 PF00440 Bacterial regulatory proteins, tetR family CV094_RS10245 PF00440 Bacterial regulatory proteins, tetR family CV094_RS10250 PF00175 Oxidoreductase NAD-binding domain CV094_RS10255 PF00487 Fatty acid desaturase CV094_RS10260 PF03725 3' exoribonuclease family, domain 2 CV094_RS10260 PF01138 3' exoribonuclease family, domain 1 CV094_RS10280 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CV094_RS10280 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CV094_RS10285 PF01510 N-acetylmuramoyl-L-alanine amidase CV094_RS10290 PF03023 Lipid II flippase MurJ CV094_RS10295 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CV094_RS10295 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CV094_RS10300 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CV094_RS10300 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CV094_RS10305 PF13614 AAA domain CV094_RS10305 PF02706 Chain length determinant protein CV094_RS10305 PF13807 G-rich domain on putative tyrosine kinase CV094_RS10310 PF01451 Low molecular weight phosphotyrosine protein phosphatase CV094_RS10315 PF02563 Polysaccharide biosynthesis/export protein CV094_RS10315 PF18412 Outer-membrane lipoprotein Wza C-terminal domain CV094_RS10315 PF10531 SLBB domain CV094_RS10320 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CV094_RS10320 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CV094_RS10320 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CV094_RS10325 PF01370 NAD dependent epimerase/dehydratase family CV094_RS10335 PF00132 Bacterial transferase hexapeptide (six repeats) CV094_RS10355 PF02719 Polysaccharide biosynthesis protein CV094_RS10355 PF08485 Polysaccharide biosynthesis protein C-terminal CV094_RS10360 PF01370 NAD dependent epimerase/dehydratase family CV094_RS10365 PF02350 UDP-N-acetylglucosamine 2-epimerase CV094_RS10370 PF13579 Glycosyl transferase 4-like domain CV094_RS10375 PF01370 NAD dependent epimerase/dehydratase family CV094_RS10380 PF00953 Glycosyl transferase family 4 CV094_RS10385 PF02397 Bacterial sugar transferase CV094_RS10390 PF00483 Nucleotidyl transferase CV094_RS10395 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CV094_RS10395 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CV094_RS10395 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CV094_RS10400 PF00342 Phosphoglucose isomerase CV094_RS10405 PF16363 GDP-mannose 4,6 dehydratase CV094_RS10410 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CV094_RS10410 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CV094_RS10410 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CV094_RS10410 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CV094_RS10415 PF02652 L-lactate permease CV094_RS10420 PF00392 Bacterial regulatory proteins, gntR family CV094_RS10420 PF07729 FCD domain CV094_RS10425 PF01070 FMN-dependent dehydrogenase CV094_RS10430 PF09330 D-lactate dehydrogenase, membrane binding CV094_RS10430 PF01565 FAD binding domain CV094_RS10435 PF00155 Aminotransferase class I and II CV094_RS10445 PF00392 Bacterial regulatory proteins, gntR family CV094_RS10445 PF07729 FCD domain CV094_RS10455 PF00285 Citrate synthase, C-terminal domain CV094_RS10460 PF00330 Aconitase family (aconitate hydratase) CV094_RS10460 PF00694 Aconitase C-terminal domain CV094_RS10500 PF00109 Beta-ketoacyl synthase, N-terminal domain CV094_RS10500 PF02801 Beta-ketoacyl synthase, C-terminal domain CV094_RS10505 PF04717 Type VI secretion system, phage-baseplate injector CV094_RS10505 PF13296 Putative type VI secretion system Rhs element Vgr CV094_RS10505 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) CV094_RS10530 PF00849 RNA pseudouridylate synthase CV094_RS10545 PF07715 TonB-dependent Receptor Plug Domain CV094_RS10545 PF00593 TonB dependent receptor CV094_RS10555 PF01037 Lrp/AsnC ligand binding domain CV094_RS10560 PF01266 FAD dependent oxidoreductase CV094_RS10565 PF01168 Alanine racemase, N-terminal domain CV094_RS10565 PF00842 Alanine racemase, C-terminal domain CV094_RS10570 PF01042 Endoribonuclease L-PSP CV094_RS10575 PF00324 Amino acid permease CV094_RS10580 PF00324 Amino acid permease CV094_RS10590 PF00171 Aldehyde dehydrogenase family CV094_RS10595 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CV094_RS10595 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CV094_RS10600 PF00501 AMP-binding enzyme CV094_RS10600 PF13193 AMP-binding enzyme C-terminal domain CV094_RS10605 PF02770 Acyl-CoA dehydrogenase, middle domain CV094_RS10605 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CV094_RS10605 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CV094_RS10610 PF00378 Enoyl-CoA hydratase/isomerase CV094_RS10615 PF00378 Enoyl-CoA hydratase/isomerase CV094_RS10620 PF00083 Sugar (and other) transporter CV094_RS10620 PF07690 Major Facilitator Superfamily CV094_RS10625 PF00765 Autoinducer synthase CV094_RS10635 PF00196 Bacterial regulatory proteins, luxR family CV094_RS10635 PF03472 Autoinducer binding domain CV094_RS10640 PF13737 Transposase DDE domain CV094_RS10645 PF00501 AMP-binding enzyme CV094_RS10650 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CV094_RS10650 PF02770 Acyl-CoA dehydrogenase, middle domain CV094_RS10650 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CV094_RS10655 PF16197 Ketoacyl-synthetase C-terminal extension CV094_RS10655 PF00550 Phosphopantetheine attachment site CV094_RS10655 PF08242 Methyltransferase domain CV094_RS10655 PF02801 Beta-ketoacyl synthase, C-terminal domain CV094_RS10655 PF00109 Beta-ketoacyl synthase, N-terminal domain CV094_RS10655 PF14765 Polyketide synthase dehydratase CV094_RS10655 PF00975 Thioesterase domain CV094_RS10660 PF00501 AMP-binding enzyme CV094_RS10660 PF13193 AMP-binding enzyme C-terminal domain CV094_RS10660 PF00668 Condensation domain CV094_RS10660 PF00550 Phosphopantetheine attachment site CV094_RS10660 PF00975 Thioesterase domain CV094_RS10675 PF16363 GDP-mannose 4,6 dehydratase CV094_RS10680 PF01648 4'-phosphopantetheinyl transferase superfamily CV094_RS10695 PF01722 BolA-like protein CV094_RS10705 PF13614 AAA domain CV094_RS10720 PF09335 SNARE associated Golgi protein CV094_RS10725 PF07681 DoxX CV094_RS10730 PF04286 Protein of unknown function (DUF445) CV094_RS10735 PF02540 NAD synthase CV094_RS10735 PF00958 GMP synthase C terminal domain CV094_RS10735 PF00117 Glutamine amidotransferase class-I CV094_RS10740 PF01909 Nucleotidyltransferase domain CV094_RS10740 PF13427 Domain of unknown function (DUF4111) CV094_RS10745 PF03551 Transcriptional regulator PadR-like family CV094_RS10755 PF02678 Pirin CV094_RS10755 PF05726 Pirin C-terminal cupin domain CV094_RS10775 PF03485 Arginyl tRNA synthetase N terminal domain CV094_RS10775 PF05746 DALR anticodon binding domain CV094_RS10775 PF00750 tRNA synthetases class I (R) CV094_RS10780 PF03949 Malic enzyme, NAD binding domain CV094_RS10780 PF00390 Malic enzyme, N-terminal domain CV094_RS10785 PF04261 Dyp-type peroxidase family CV094_RS10790 PF01810 LysE type translocator CV094_RS10795 PF00950 ABC 3 transport family CV094_RS10800 PF00005 ABC transporter CV094_RS10820 PF00119 ATP synthase A chain CV094_RS10825 PF00137 ATP synthase subunit C CV094_RS10830 PF00430 ATP synthase B/B' CF(0) CV094_RS10835 PF00213 ATP synthase delta (OSCP) subunit CV094_RS10840 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CV094_RS10840 PF02874 ATP synthase alpha/beta family, beta-barrel domain CV094_RS10840 PF00306 ATP synthase alpha/beta chain, C terminal domain CV094_RS10845 PF00231 ATP synthase CV094_RS10850 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CV094_RS10850 PF02874 ATP synthase alpha/beta family, beta-barrel domain CV094_RS10855 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CV094_RS10865 PF00255 Glutathione peroxidase CV094_RS10875 PF07690 Major Facilitator Superfamily CV094_RS10880 PF00440 Bacterial regulatory proteins, tetR family CV094_RS10885 PF00892 EamA-like transporter family CV094_RS10890 PF01300 Telomere recombination CV094_RS10895 PF17782 DprA winged helix domain CV094_RS10895 PF02481 DNA recombination-mediator protein A CV094_RS10905 PF01327 Polypeptide deformylase CV094_RS10930 PF00440 Bacterial regulatory proteins, tetR family CV094_RS10965 PF00291 Pyridoxal-phosphate dependent enzyme CV094_RS10975 PF03358 NADPH-dependent FMN reductase CV094_RS10995 PF08497 Radical SAM N-terminal CV094_RS10995 PF04055 Radical SAM superfamily CV094_RS10995 PF11842 Domain of unknown function (DUF3362) CV094_RS11010 PF11798 IMS family HHH motif CV094_RS11010 PF11799 impB/mucB/samB family C-terminal domain CV094_RS11010 PF00817 impB/mucB/samB family CV094_RS11020 PF07690 Major Facilitator Superfamily CV094_RS11025 PF03641 Possible lysine decarboxylase CV094_RS11030 PF03741 Integral membrane protein TerC family CV094_RS11030 PF03471 Transporter associated domain CV094_RS11035 PF02810 SEC-C motif CV094_RS11040 PF03458 UPF0126 domain CV094_RS11045 PF07690 Major Facilitator Superfamily CV094_RS11050 PF03989 DNA gyrase C-terminal domain, beta-propeller CV094_RS11050 PF00521 DNA gyrase/topoisomerase IV, subunit A CV094_RS11055 PF00501 AMP-binding enzyme CV094_RS11055 PF13193 AMP-binding enzyme C-terminal domain CV094_RS11070 PF00719 Inorganic pyrophosphatase CV094_RS11075 PF03573 outer membrane porin, OprD family CV094_RS11085 PF00701 Dihydrodipicolinate synthetase family CV094_RS11095 PF00392 Bacterial regulatory proteins, gntR family CV094_RS11095 PF00155 Aminotransferase class I and II CV094_RS11100 PF01078 Magnesium chelatase, subunit ChlI CV094_RS11100 PF13335 Magnesium chelatase, subunit ChlI C-terminal CV094_RS11110 PF00665 Integrase core domain CV094_RS11140 PF00582 Universal stress protein family CV094_RS11145 PF01740 STAS domain CV094_RS11145 PF00916 Sulfate permease family CV094_RS11155 PF01078 Magnesium chelatase, subunit ChlI CV094_RS11155 PF13335 Magnesium chelatase, subunit ChlI C-terminal CV094_RS11165 PF00543 Nitrogen regulatory protein P-II CV094_RS11170 PF00909 Ammonium Transporter Family CV094_RS11175 PF03477 ATP cone domain CV094_RS11180 PF01872 RibD C-terminal domain CV094_RS11180 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CV094_RS11190 PF00677 Lumazine binding domain CV094_RS11210 PF00883 Cytosol aminopeptidase family, catalytic domain CV094_RS11210 PF02789 Cytosol aminopeptidase family, N-terminal domain CV094_RS11220 PF03739 Lipopolysaccharide export system permease LptF/LptG CV094_RS11225 PF01676 Metalloenzyme superfamily CV094_RS11225 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CV094_RS11230 PF00595 PDZ domain CV094_RS11230 PF03572 Peptidase family S41 CV094_RS11235 PF00158 Sigma-54 interaction domain CV094_RS11235 PF00072 Response regulator receiver domain CV094_RS11235 PF02954 Bacterial regulatory protein, Fis family CV094_RS11240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CV094_RS11240 PF00512 His Kinase A (phospho-acceptor) domain CV094_RS11245 PF00072 Response regulator receiver domain CV094_RS11245 PF00196 Bacterial regulatory proteins, luxR family CV094_RS11250 PF00768 D-alanyl-D-alanine carboxypeptidase CV094_RS11255 PF00291 Pyridoxal-phosphate dependent enzyme CV094_RS11260 PF01842 ACT domain CV094_RS11260 PF03447 Homoserine dehydrogenase, NAD binding domain CV094_RS11260 PF00742 Homoserine dehydrogenase CV094_RS11265 PF13098 Thioredoxin-like domain CV094_RS11265 PF10411 Disulfide bond isomerase protein N-terminus CV094_RS11270 PF00589 Phage integrase family CV094_RS11270 PF02899 Phage integrase, N-terminal SAM-like domain CV094_RS11280 PF02421 Ferrous iron transport protein B CV094_RS11280 PF07664 Ferrous iron transport protein B C terminus CV094_RS11280 PF07670 Nucleoside recognition CV094_RS11290 PF08245 Mur ligase middle domain CV094_RS11290 PF02875 Mur ligase family, glutamate ligase domain CV094_RS11295 PF01098 Cell cycle protein CV094_RS11300 PF00749 tRNA synthetases class I (E and Q), catalytic domain CV094_RS11305 PF01258 Prokaryotic dksA/traR C4-type zinc finger CV094_RS11310 PF00149 Calcineurin-like phosphoesterase CV094_RS11315 PF00293 NUDIX domain CV094_RS11320 PF13667 ThiC-associated domain CV094_RS11320 PF01964 Radical SAM ThiC family CV094_RS11335 PF00892 EamA-like transporter family CV094_RS11340 PF02321 Outer membrane efflux protein CV094_RS11345 PF01895 PhoU domain CV094_RS11350 PF04362 Bacterial Fe(2+) trafficking CV094_RS11355 PF00206 Lyase CV094_RS11355 PF14698 Argininosuccinate lyase C-terminal CV094_RS11360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CV094_RS11360 PF07694 5TMR of 5TMR-LYT CV094_RS11360 PF06580 Histidine kinase CV094_RS11365 PF00072 Response regulator receiver domain CV094_RS11365 PF04397 LytTr DNA-binding domain CV094_RS11370 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CV094_RS11370 PF03900 Porphobilinogen deaminase, C-terminal domain CV094_RS11395 PF00816 H-NS histone family CV094_RS11410 PF00263 Bacterial type II and III secretion system protein CV094_RS11410 PF03958 Bacterial type II/III secretion system short domain CV094_RS11415 PF00498 FHA domain CV094_RS11415 PF12401 Protein of unknown function (DUF2662) CV094_RS11420 PF13419 Haloacid dehalogenase-like hydrolase CV094_RS11425 PF00425 chorismate binding enzyme CV094_RS11425 PF04715 Anthranilate synthase component I, N terminal region CV094_RS11450 PF03143 Elongation factor Tu C-terminal domain CV094_RS11450 PF03144 Elongation factor Tu domain 2 CV094_RS11450 PF00009 Elongation factor Tu GTP binding domain CV094_RS11460 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CV094_RS11465 PF00467 KOW motif CV094_RS11465 PF02357 Transcription termination factor nusG CV094_RS11470 PF03946 Ribosomal protein L11, N-terminal domain CV094_RS11470 PF00298 Ribosomal protein L11, RNA binding domain CV094_RS11475 PF00687 Ribosomal protein L1p/L10e family CV094_RS11480 PF00466 Ribosomal protein L10 CV094_RS11485 PF00542 Ribosomal protein L7/L12 C-terminal domain CV094_RS11485 PF16320 Ribosomal protein L7/L12 dimerisation domain CV094_RS11490 PF04565 RNA polymerase Rpb2, domain 3 CV094_RS11490 PF10385 RNA polymerase beta subunit external 1 domain CV094_RS11490 PF00562 RNA polymerase Rpb2, domain 6 CV094_RS11490 PF04560 RNA polymerase Rpb2, domain 7 CV094_RS11490 PF04561 RNA polymerase Rpb2, domain 2 CV094_RS11490 PF04563 RNA polymerase beta subunit CV094_RS11495 PF04983 RNA polymerase Rpb1, domain 3 CV094_RS11495 PF05000 RNA polymerase Rpb1, domain 4 CV094_RS11495 PF00623 RNA polymerase Rpb1, domain 2 CV094_RS11495 PF04998 RNA polymerase Rpb1, domain 5 CV094_RS11495 PF04997 RNA polymerase Rpb1, domain 1 CV094_RS11515 PF00561 alpha/beta hydrolase fold CV094_RS11520 PF03553 Na+/H+ antiporter family CV094_RS11520 PF13726 Na+-H+ antiporter family CV094_RS11535 PF00183 Hsp90 protein CV094_RS11535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CV094_RS11550 PF01323 DSBA-like thioredoxin domain CV094_RS11560 PF09278 MerR, DNA binding CV094_RS11560 PF00376 MerR family regulatory protein CV094_RS11580 PF02803 Thiolase, C-terminal domain CV094_RS11580 PF00108 Thiolase, N-terminal domain CV094_RS11585 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CV094_RS11585 PF00378 Enoyl-CoA hydratase/isomerase CV094_RS11585 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CV094_RS11610 PF01541 GIY-YIG catalytic domain CV094_RS11610 PF02151 UvrB/uvrC motif CV094_RS11610 PF08459 UvrC Helix-hairpin-helix N-terminal CV094_RS11620 PF01066 CDP-alcohol phosphatidyltransferase CV094_RS11625 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CV094_RS11625 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CV094_RS11625 PF12833 Helix-turn-helix domain CV094_RS11625 PF02805 Metal binding domain of Ada CV094_RS11650 PF13533 Biotin-lipoyl like CV094_RS11655 PF03652 Holliday junction resolvase CV094_RS11660 PF02622 Uncharacterized ACR, COG1678 CV094_RS11665 PF02463 RecF/RecN/SMC N terminal domain CV094_RS11675 PF06865 Pyrimidine/purine nucleoside phosphorylase CV094_RS11680 PF00588 SpoU rRNA Methylase family CV094_RS11680 PF08032 RNA 2'-O ribose methyltransferase substrate binding CV094_RS11690 PF01121 Dephospho-CoA kinase CV094_RS11695 PF06750 Bacterial Peptidase A24 N-terminal domain CV094_RS11695 PF01478 Type IV leader peptidase family CV094_RS11700 PF00482 Type II secretion system (T2SS), protein F CV094_RS11705 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CV094_RS11705 PF00437 Type II/IV secretion system protein CV094_RS11710 PF00121 Triosephosphate isomerase CV094_RS11715 PF03840 Preprotein translocase SecG subunit CV094_RS11735 PF02576 RimP N-terminal domain CV094_RS11735 PF17384 RimP C-terminal SH3 domain CV094_RS11740 PF13184 NusA-like KH domain CV094_RS11740 PF08529 NusA N-terminal domain CV094_RS11740 PF00575 S1 RNA binding domain CV094_RS11745 PF04760 Translation initiation factor IF-2, N-terminal region CV094_RS11745 PF08364 Bacterial translation initiation factor IF-2 associated region CV094_RS11745 PF00009 Elongation factor Tu GTP binding domain CV094_RS11745 PF11987 Translation-initiation factor 2 CV094_RS11750 PF02033 Ribosome-binding factor A CV094_RS11755 PF03334 Na+/H+ antiporter subunit CV094_RS11760 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) CV094_RS11765 PF01899 Na+/H+ ion antiporter subunit CV094_RS11770 PF00361 Proton-conducting membrane transporter CV094_RS11775 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CV094_RS11780 PF13244 Domain of unknown function (DUF4040) CV094_RS11780 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter CV094_RS11780 PF00361 Proton-conducting membrane transporter CV094_RS11780 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CV094_RS11795 PF01502 Phosphoribosyl-AMP cyclohydrolase CV094_RS11800 PF01494 FAD binding domain CV094_RS11805 PF03109 ABC1 family CV094_RS11815 PF01209 ubiE/COQ5 methyltransferase family CV094_RS11825 PF03976 Polyphosphate kinase 2 (PPK2) CV094_RS11835 PF17946 RecC C-terminal domain CV094_RS11840 PF13361 UvrD-like helicase C-terminal domain CV094_RS11840 PF12705 PD-(D/E)XK nuclease superfamily CV094_RS11840 PF00580 UvrD/REP helicase N-terminal domain CV094_RS11845 PF13538 UvrD-like helicase C-terminal domain CV094_RS11850 PF00144 Beta-lactamase CV094_RS11855 PF00312 Ribosomal protein S15 CV094_RS11860 PF00575 S1 RNA binding domain CV094_RS11860 PF03725 3' exoribonuclease family, domain 2 CV094_RS11860 PF01138 3' exoribonuclease family, domain 1 CV094_RS11860 PF00013 KH domain CV094_RS11860 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CV094_RS11865 PF01544 CorA-like Mg2+ transporter protein CV094_RS11875 PF01556 DnaJ C terminal domain CV094_RS11875 PF00226 DnaJ domain CV094_RS11885 PF01430 Hsp33 protein CV094_RS11890 PF02254 TrkA-N domain CV094_RS11890 PF00999 Sodium/hydrogen exchanger family CV094_RS11895 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CV094_RS11895 PF18074 Primosomal protein N C-terminal domain CV094_RS11895 PF17764 3′ DNA-binding domain (3′BD) CV094_RS11895 PF00271 Helicase conserved C-terminal domain CV094_RS11895 PF00270 DEAD/DEAH box helicase CV094_RS11900 PF00482 Type II secretion system (T2SS), protein F CV094_RS11905 PF07963 Prokaryotic N-terminal methylation motif CV094_RS11905 PF08334 Type II secretion system (T2SS), protein G CV094_RS11915 PF01588 Putative tRNA binding domain CV094_RS11920 PF00795 Carbon-nitrogen hydrolase CV094_RS11925 PF00571 CBS domain CV094_RS11925 PF03471 Transporter associated domain CV094_RS11930 PF01206 Sulfurtransferase TusA CV094_RS11945 PF01177 Asp/Glu/Hydantoin racemase CV094_RS11955 PF00762 Ferrochelatase CV094_RS11960 PF00753 Metallo-beta-lactamase superfamily CV094_RS11965 PF03884 DNA gyrase inhibitor YacG CV094_RS11985 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CV094_RS12000 PF01197 Ribosomal protein L31 CV094_RS12005 PF03109 ABC1 family CV094_RS12010 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CV094_RS12010 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CV094_RS12015 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CV094_RS12015 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CV094_RS12015 PF02770 Acyl-CoA dehydrogenase, middle domain CV094_RS12020 PF01554 MatE CV094_RS12030 PF04055 Radical SAM superfamily CV094_RS12030 PF06969 HemN C-terminal domain CV094_RS12035 PF00106 short chain dehydrogenase CV094_RS12040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CV094_RS12040 PF03466 LysR substrate binding domain CV094_RS12055 PF13193 AMP-binding enzyme C-terminal domain CV094_RS12055 PF00501 AMP-binding enzyme CV094_RS12060 PF12111 Polyribonucleotide phosphorylase C terminal CV094_RS12060 PF10150 Ribonuclease E/G family CV094_RS12060 PF00575 S1 RNA binding domain CV094_RS12070 PF01479 S4 domain CV094_RS12070 PF00849 RNA pseudouridylate synthase CV094_RS12075 PF13419 Haloacid dehalogenase-like hydrolase CV094_RS12080 PF08279 HTH domain CV094_RS12080 PF13280 WYL domain CV094_RS12085 PF02798 Glutathione S-transferase, N-terminal domain CV094_RS12095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CV094_RS12095 PF03466 LysR substrate binding domain CV094_RS12100 PF12706 Beta-lactamase superfamily domain CV094_RS12105 PF00141 Peroxidase CV094_RS12110 PF02896 PEP-utilising enzyme, TIM barrel domain CV094_RS12110 PF00391 PEP-utilising enzyme, mobile domain CV094_RS12110 PF05524 PEP-utilising enzyme, N-terminal CV094_RS12110 PF01590 GAF domain CV094_RS12115 PF00293 NUDIX domain CV094_RS12135 PF03466 LysR substrate binding domain CV094_RS12135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CV094_RS12145 PF00330 Aconitase family (aconitate hydratase) CV094_RS12150 PF00694 Aconitase C-terminal domain CV094_RS12160 PF00180 Isocitrate/isopropylmalate dehydrogenase CV094_RS12175 PF01176 Translation initiation factor 1A / IF-1 CV094_RS12185 PF01416 tRNA pseudouridine synthase CV094_RS12205 PF01118 Semialdehyde dehydrogenase, NAD binding domain CV094_RS12205 PF02774 Semialdehyde dehydrogenase, dimerisation domain CV094_RS12215 PF00375 Sodium:dicarboxylate symporter family CV094_RS12225 PF03279 Bacterial lipid A biosynthesis acyltransferase CV094_RS12230 PF01810 LysE type translocator CV094_RS12235 PF00005 ABC transporter CV094_RS12235 PF12848 ABC transporter CV094_RS12235 PF16326 ABC transporter C-terminal domain CV094_RS12240 PF04102 SlyX CV094_RS12245 PF00107 Zinc-binding dehydrogenase CV094_RS12245 PF08240 Alcohol dehydrogenase GroES-like domain CV094_RS12250 PF01638 HxlR-like helix-turn-helix CV094_RS12260 PF08272 Topoisomerase I zinc-ribbon-like CV094_RS12260 PF01751 Toprim domain CV094_RS12260 PF01396 Topoisomerase DNA binding C4 zinc finger CV094_RS12260 PF01131 DNA topoisomerase CV094_RS12275 PF00580 UvrD/REP helicase N-terminal domain CV094_RS12275 PF13361 UvrD-like helicase C-terminal domain CV094_RS12280 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) CV094_RS12300 PF02254 TrkA-N domain CV094_RS12300 PF00999 Sodium/hydrogen exchanger family CV094_RS12305 PF00471 Ribosomal protein L33 CV094_RS12310 PF00830 Ribosomal L28 family CV094_RS12315 PF00171 Aldehyde dehydrogenase family CV094_RS12325 PF00551 Formyl transferase CV094_RS12325 PF01842 ACT domain CV094_RS12335 PF01618 MotA/TolQ/ExbB proton channel family CV094_RS12345 PF01625 Peptide methionine sulfoxide reductase CV094_RS12355 PF00186 Dihydrofolate reductase CV094_RS12360 PF00303 Thymidylate synthase CV094_RS12375 PF01790 Prolipoprotein diacylglyceryl transferase CV094_RS12395 PF00902 Sec-independent protein translocase protein (TatC) CV094_RS12400 PF02416 mttA/Hcf106 family CV094_RS12405 PF02416 mttA/Hcf106 family CV094_RS12415 PF01725 Ham1 family CV094_RS12425 PF00561 alpha/beta hydrolase fold CV094_RS12425 PF07021 Methionine biosynthesis protein MetW CV094_RS12430 PF00561 alpha/beta hydrolase fold CV094_RS12435 PF00682 HMGL-like CV094_RS12435 PF08502 LeuA allosteric (dimerisation) domain CV094_RS12440 PF13640 2OG-Fe(II) oxygenase superfamily CV094_RS12440 PF18331 PKHD-type hydroxylase C-terminal domain CV094_RS12445 PF00593 TonB dependent receptor CV094_RS12445 PF07715 TonB-dependent Receptor Plug Domain CV094_RS12450 PF05697 Bacterial trigger factor protein (TF) CV094_RS12450 PF05698 Bacterial trigger factor protein (TF) C-terminus CV094_RS12450 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CV094_RS12455 PF00574 Clp protease CV094_RS12460 PF07724 AAA domain (Cdc48 subfamily) CV094_RS12460 PF10431 C-terminal, D2-small domain, of ClpB protein CV094_RS12460 PF06689 ClpX C4-type zinc finger CV094_RS12475 PF05681 Fumarate hydratase (Fumerase) CV094_RS12475 PF05683 Fumarase C-terminus CV094_RS12480 PF01515 Phosphate acetyl/butaryl transferase CV094_RS12480 PF07085 DRTGG domain CV094_RS12485 PF00871 Acetokinase family CV094_RS12490 PF00920 Dehydratase family CV094_RS12495 PF01081 KDPG and KHG aldolase CV094_RS12500 PF02447 GntP family permease CV094_RS12505 PF01202 Shikimate kinase CV094_RS12510 PF00171 Aldehyde dehydrogenase family CV094_RS12515 PF00171 Aldehyde dehydrogenase family CV094_RS12520 PF00561 alpha/beta hydrolase fold CV094_RS12530 PF00933 Glycosyl hydrolase family 3 N terminal domain CV094_RS12535 PF03572 Peptidase family S41 CV094_RS12535 PF11818 C-terminal domain of tail specific protease (DUF3340) CV094_RS12535 PF17804 Tail specific protease N-terminal domain CV094_RS12535 PF00595 PDZ domain CV094_RS12540 PF00534 Glycosyl transferases group 1 CV094_RS12540 PF13439 Glycosyltransferase Family 4 CV094_RS12545 PF01569 PAP2 superfamily CV094_RS12550 PF04384 Iron-sulphur cluster assembly CV094_RS12555 PF00334 Nucleoside diphosphate kinase CV094_RS12560 PF04055 Radical SAM superfamily CV094_RS12570 PF13464 Domain of unknown function (DUF4115) CV094_RS12575 PF04551 GcpE protein CV094_RS12580 PF03129 Anticodon binding domain CV094_RS12580 PF13393 Histidyl-tRNA synthetase CV094_RS12590 PF13360 PQQ-like domain CV094_RS12595 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CV094_RS12595 PF01926 50S ribosome-binding GTPase CV094_RS12610 PF00550 Phosphopantetheine attachment site CV094_RS12615 PF00550 Phosphopantetheine attachment site CV094_RS12625 PF13193 AMP-binding enzyme C-terminal domain CV094_RS12625 PF00501 AMP-binding enzyme CV094_RS12640 PF00221 Aromatic amino acid lyase CV094_RS12660 PF04820 Tryptophan halogenase CV094_RS12670 PF00109 Beta-ketoacyl synthase, N-terminal domain CV094_RS12670 PF02801 Beta-ketoacyl synthase, C-terminal domain CV094_RS12685 PF00109 Beta-ketoacyl synthase, N-terminal domain CV094_RS12685 PF02801 Beta-ketoacyl synthase, C-terminal domain CV094_RS12700 PF02556 Preprotein translocase subunit SecB CV094_RS12705 PF00462 Glutaredoxin CV094_RS12715 PF03193 RsgA GTPase CV094_RS12720 PF00929 Exonuclease CV094_RS12735 PF02321 Outer membrane efflux protein CV094_RS12740 PF00005 ABC transporter CV094_RS12740 PF12704 MacB-like periplasmic core domain CV094_RS12740 PF02687 FtsX-like permease family CV094_RS12745 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CV094_RS12760 PF13603 Leucyl-tRNA synthetase, Domain 2 CV094_RS12760 PF00133 tRNA synthetases class I (I, L, M and V) CV094_RS12760 PF08264 Anticodon-binding domain of tRNA CV094_RS12760 PF09334 tRNA synthetases class I (M) CV094_RS12770 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CV094_RS12770 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CV094_RS12770 PF00205 Thiamine pyrophosphate enzyme, central domain CV094_RS12775 PF10369 Small subunit of acetolactate synthase CV094_RS12780 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CV094_RS12780 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CV094_RS12785 PF03707 Bacterial signalling protein N terminal repeat CV094_RS12785 PF00990 Diguanylate cyclase, GGDEF domain CV094_RS12785 PF00563 EAL domain CV094_RS12800 PF13737 Transposase DDE domain CV094_RS12815 PF16658 Class II release factor RF3, C-terminal domain CV094_RS12815 PF03144 Elongation factor Tu domain 2 CV094_RS12815 PF00009 Elongation factor Tu GTP binding domain CV094_RS12830 PF01026 TatD related DNase CV094_RS12835 PF00330 Aconitase family (aconitate hydratase) CV094_RS12835 PF00694 Aconitase C-terminal domain CV094_RS12845 PF00899 ThiF family CV094_RS12855 PF03466 LysR substrate binding domain CV094_RS12855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CV094_RS12865 PF01207 Dihydrouridine synthase (Dus) CV094_RS12870 PF07690 Major Facilitator Superfamily CV094_RS12880 PF00892 EamA-like transporter family CV094_RS12885 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CV094_RS12885 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CV094_RS12890 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CV094_RS12895 PF02233 NAD(P) transhydrogenase beta subunit CV094_RS12900 PF00106 short chain dehydrogenase CV094_RS12910 PF01261 Xylose isomerase-like TIM barrel CV094_RS12915 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CV094_RS12915 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CV094_RS12920 PF00378 Enoyl-CoA hydratase/isomerase CV094_RS12925 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CV094_RS12925 PF01627 Hpt domain CV094_RS12925 PF00072 Response regulator receiver domain CV094_RS12925 PF00512 His Kinase A (phospho-acceptor) domain CV094_RS12925 PF00672 HAMP domain CV094_RS12925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CV094_RS12930 PF00291 Pyridoxal-phosphate dependent enzyme CV094_RS12940 PF05958 tRNA (Uracil-5-)-methyltransferase CV094_RS12945 PF02824 TGS domain CV094_RS12945 PF04607 Region found in RelA / SpoT proteins CV094_RS12945 PF13291 ACT domain CV094_RS12955 PF03819 MazG nucleotide pyrophosphohydrolase domain CV094_RS12965 PF12627 Probable RNA and SrmB- binding site of polymerase A CV094_RS12965 PF12626 Polymerase A arginine-rich C-terminus CV094_RS12965 PF01743 Poly A polymerase head domain CV094_RS12970 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CV094_RS12975 PF02548 Ketopantoate hydroxymethyltransferase CV094_RS12980 PF02569 Pantoate-beta-alanine ligase CV094_RS12985 PF03668 P-loop ATPase protein family CV094_RS12990 PF00381 PTS HPr component phosphorylation site CV094_RS12995 PF04751 Protein of unknown function (DUF615) CV094_RS13000 PF00501 AMP-binding enzyme CV094_RS13000 PF13193 AMP-binding enzyme C-terminal domain CV094_RS13005 PF02824 TGS domain CV094_RS13005 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CV094_RS13005 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CV094_RS13005 PF03129 Anticodon binding domain CV094_RS13010 PF00707 Translation initiation factor IF-3, C-terminal domain CV094_RS13010 PF05198 Translation initiation factor IF-3, N-terminal domain CV094_RS13020 PF02798 Glutathione S-transferase, N-terminal domain CV094_RS13020 PF00043 Glutathione S-transferase, C-terminal domain CV094_RS13025 PF09335 SNARE associated Golgi protein CV094_RS13030 PF07690 Major Facilitator Superfamily CV094_RS13035 PF01632 Ribosomal protein L35 CV094_RS13040 PF00453 Ribosomal protein L20 CV094_RS13060 PF01409 tRNA synthetases class II core domain (F) CV094_RS13060 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CV094_RS13065 PF03483 B3/4 domain CV094_RS13065 PF03484 tRNA synthetase B5 domain CV094_RS13065 PF03147 Ferredoxin-fold anticodon binding domain CV094_RS13065 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CV094_RS13065 PF01588 Putative tRNA binding domain CV094_RS13070 PF00216 Bacterial DNA-binding protein CV094_RS13085 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CV094_RS13085 PF07498 Rho termination factor, N-terminal domain CV094_RS13085 PF07497 Rho termination factor, RNA-binding domain CV094_RS13090 PF00085 Thioredoxin CV094_RS13095 PF02541 Ppx/GppA phosphatase family CV094_RS13100 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CV094_RS13105 PF11734 TilS substrate C-terminal domain CV094_RS13105 PF09179 TilS substrate binding domain CV094_RS13105 PF01171 PP-loop family CV094_RS13110 PF03807 NADP oxidoreductase coenzyme F420-dependent CV094_RS13110 PF14748 Pyrroline-5-carboxylate reductase dimerisation CV094_RS13115 PF02325 YGGT family CV094_RS13120 PF01612 3'-5' exonuclease CV094_RS13120 PF00476 DNA polymerase family A CV094_RS13120 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CV094_RS13120 PF01367 5'-3' exonuclease, C-terminal SAM fold CV094_RS13140 PF00437 Type II/IV secretion system protein CV094_RS13145 PF02566 OsmC-like protein CV094_RS13150 PF01047 MarR family CV094_RS13160 PF00795 Carbon-nitrogen hydrolase CV094_RS13205 PF04963 Sigma-54 factor, core binding domain CV094_RS13205 PF04552 Sigma-54, DNA binding domain CV094_RS13205 PF00309 Sigma-54 factor, Activator interacting domain (AID) CV094_RS13210 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CV094_RS13215 PF01722 BolA-like protein CV094_RS13220 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CV094_RS13225 PF01634 ATP phosphoribosyltransferase CV094_RS13230 PF00815 Histidinol dehydrogenase CV094_RS13235 PF00155 Aminotransferase class I and II CV094_RS13240 PF00425 chorismate binding enzyme CV094_RS13240 PF04715 Anthranilate synthase component I, N terminal region CV094_RS13280 PF00293 NUDIX domain CV094_RS13285 PF00132 Bacterial transferase hexapeptide (six repeats) CV094_RS13290 PF00814 Glycoprotease family CV094_RS13295 PF04445 Putative SAM-dependent methyltransferase CV094_RS13305 PF00756 Putative esterase CV094_RS13315 PF00834 Ribulose-phosphate 3 epimerase family CV094_RS13330 PF07731 Multicopper oxidase CV094_RS13330 PF00394 Multicopper oxidase CV094_RS13330 PF07732 Multicopper oxidase CV094_RS13335 PF05275 Copper resistance protein B precursor (CopB) CV094_RS13345 PF00893 Small Multidrug Resistance protein CV094_RS13350 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CV094_RS13350 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CV094_RS13355 PF01960 ArgJ family CV094_RS13360 PF02445 Quinolinate synthetase A protein CV094_RS13385 PF00962 Adenosine/AMP deaminase CV094_RS13390 PF08240 Alcohol dehydrogenase GroES-like domain CV094_RS13390 PF00107 Zinc-binding dehydrogenase CV094_RS13395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CV094_RS13395 PF03466 LysR substrate binding domain CV094_RS13400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CV094_RS13400 PF02770 Acyl-CoA dehydrogenase, middle domain CV094_RS13400 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CV094_RS13405 PF07690 Major Facilitator Superfamily CV094_RS13410 PF02515 CoA-transferase family III CV094_RS13420 PF00890 FAD binding domain CV094_RS13420 PF14537 Cytochrome c3 CV094_RS13425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CV094_RS13425 PF03466 LysR substrate binding domain CV094_RS13435 PF07690 Major Facilitator Superfamily CV094_RS13445 PF03466 LysR substrate binding domain CV094_RS13445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CV094_RS13455 PF01546 Peptidase family M20/M25/M40 CV094_RS13455 PF07687 Peptidase dimerisation domain CV094_RS13460 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CV094_RS13460 PF12833 Helix-turn-helix domain CV094_RS13470 PF01810 LysE type translocator CV094_RS13475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CV094_RS13475 PF03466 LysR substrate binding domain CV094_RS13485 PF01717 Cobalamin-independent synthase, Catalytic domain CV094_RS13485 PF08267 Cobalamin-independent synthase, N-terminal domain CV094_RS13490 PF01613 Flavin reductase like domain CV094_RS13505 PF00905 Penicillin binding protein transpeptidase domain CV094_RS13525 PF13614 AAA domain CV094_RS13530 PF10544 T5orf172 domain CV094_RS13570 PF02567 Phenazine biosynthesis-like protein CV094_RS13590 PF13360 PQQ-like domain CV094_RS13590 PF01011 PQQ enzyme repeat CV094_RS13660 PF13756 Stimulus-sensing domain CV094_RS13660 PF13755 Sensor N-terminal transmembrane domain CV094_RS13660 PF00512 His Kinase A (phospho-acceptor) domain CV094_RS13660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CV094_RS13660 PF00672 HAMP domain CV094_RS13670 PF00268 Ribonucleotide reductase, small chain CV094_RS13680 PF02867 Ribonucleotide reductase, barrel domain CV094_RS13680 PF00317 Ribonucleotide reductase, all-alpha domain CV094_RS13680 PF03477 ATP cone domain CV094_RS13690 PF00486 Transcriptional regulatory protein, C terminal CV094_RS13690 PF00072 Response regulator receiver domain CV094_RS13695 PF00672 HAMP domain CV094_RS13695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CV094_RS13695 PF00512 His Kinase A (phospho-acceptor) domain CV094_RS13705 PF17151 Periplasmic sensor domain CV094_RS13705 PF00990 Diguanylate cyclase, GGDEF domain CV094_RS13710 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CV094_RS13715 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CV094_RS13720 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CV094_RS13720 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CV094_RS13730 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CV094_RS13730 PF10531 SLBB domain CV094_RS13730 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CV094_RS13735 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CV094_RS13735 PF00384 Molybdopterin oxidoreductase CV094_RS13735 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CV094_RS13740 PF00146 NADH dehydrogenase CV094_RS13745 PF12838 4Fe-4S dicluster domain CV094_RS13750 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CV094_RS13755 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CV094_RS13760 PF00361 Proton-conducting membrane transporter CV094_RS13760 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CV094_RS13765 PF00361 Proton-conducting membrane transporter CV094_RS13770 PF00361 Proton-conducting membrane transporter CV094_RS13780 PF00313 'Cold-shock' DNA-binding domain CV094_RS13785 PF03466 LysR substrate binding domain CV094_RS13785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CV094_RS13790 PF00175 Oxidoreductase NAD-binding domain CV094_RS13790 PF00970 Oxidoreductase FAD-binding domain CV094_RS13805 PF05552 Conserved TM helix CV094_RS13820 PF00291 Pyridoxal-phosphate dependent enzyme CV094_RS13825 PF13533 Biotin-lipoyl like CV094_RS13850 PF09334 tRNA synthetases class I (M) CV094_RS13850 PF01588 Putative tRNA binding domain CV094_RS13860 PF10609 NUBPL iron-transfer P-loop NTPase CV094_RS13870 PF01048 Phosphorylase superfamily CV094_RS13885 PF00692 dUTPase CV094_RS13920 PF01207 Dihydrouridine synthase (Dus) CV094_RS13930 PF02881 SRP54-type protein, helical bundle domain CV094_RS13930 PF02978 Signal peptide binding domain CV094_RS13930 PF00448 SRP54-type protein, GTPase domain CV094_RS13935 PF03309 Type III pantothenate kinase CV094_RS13945 PF01925 Sulfite exporter TauE/SafE CV094_RS13955 PF06470 SMC proteins Flexible Hinge Domain CV094_RS13955 PF02463 RecF/RecN/SMC N terminal domain CV094_RS13965 PF00533 BRCA1 C Terminus (BRCT) domain CV094_RS13965 PF12826 Helix-hairpin-helix motif CV094_RS13965 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CV094_RS13965 PF03120 NAD-dependent DNA ligase OB-fold domain CV094_RS13965 PF01653 NAD-dependent DNA ligase adenylation domain CV094_RS13970 PF00210 Ferritin-like domain CV094_RS13975 PF07690 Major Facilitator Superfamily CV094_RS13980 PF00982 Glycosyltransferase family 20 CV094_RS13985 PF02358 Trehalose-phosphatase CV094_RS13990 PF08241 Methyltransferase domain CV094_RS13990 PF12697 Alpha/beta hydrolase family CV094_RS13995 PF04055 Radical SAM superfamily CV094_RS13995 PF06968 Biotin and Thiamin Synthesis associated domain CV094_RS13995 PF00202 Aminotransferase class-III CV094_RS14000 PF00155 Aminotransferase class I and II CV094_RS14015 PF00849 RNA pseudouridylate synthase CV094_RS14015 PF01479 S4 domain CV094_RS14020 PF04079 Segregation and condensation complex subunit ScpB CV094_RS14025 PF02616 Segregation and condensation protein ScpA CV094_RS14030 PF01300 Telomere recombination CV094_RS14035 PF04315 Elongation factor P hydroxylase CV094_RS14040 PF02620 Large ribosomal RNA subunit accumulation protein YceD CV094_RS14045 PF01783 Ribosomal L32p protein family CV094_RS14050 PF00698 Acyl transferase domain CV094_RS14060 PF00550 Phosphopantetheine attachment site CV094_RS14065 PF04972 BON domain CV094_RS14065 PF01476 LysM domain CV094_RS14070 PF08543 Phosphomethylpyrimidine kinase CV094_RS14070 PF03070 TENA/THI-4/PQQC family CV094_RS14070 PF02581 Thiamine monophosphate synthase CV094_RS14080 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CV094_RS14095 PF02261 Aspartate decarboxylase CV094_RS14100 PF01195 Peptidyl-tRNA hydrolase CV094_RS14105 PF01386 Ribosomal L25p family CV094_RS14110 PF14572 Phosphoribosyl synthetase-associated domain CV094_RS14110 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CV094_RS14135 PF00288 GHMP kinases N terminal domain CV094_RS14135 PF08544 GHMP kinases C terminal CV094_RS14140 PF03550 Outer membrane lipoprotein LolB CV094_RS14150 PF01488 Shikimate / quinate 5-dehydrogenase CV094_RS14150 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CV094_RS14150 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CV094_RS14155 PF01807 CHC2 zinc finger CV094_RS14155 PF08275 DNA primase catalytic core, N-terminal domain CV094_RS14155 PF08278 DNA primase DnaG DnaB-binding CV094_RS14155 PF10410 DnaB-helicase binding domain of primase CV094_RS14160 PF13525 Outer membrane lipoprotein CV094_RS14165 PF00849 RNA pseudouridylate synthase CV094_RS14165 PF01479 S4 domain CV094_RS14170 PF02578 Multi-copper polyphenol oxidoreductase laccase CV094_RS14175 PF03358 NADPH-dependent FMN reductase CV094_RS14180 PF01668 SmpB protein CV094_RS14185 PF01467 Cytidylyltransferase-like CV094_RS14190 PF00037 4Fe-4S binding domain CV094_RS14210 PF03466 LysR substrate binding domain CV094_RS14210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CV094_RS14215 PF00180 Isocitrate/isopropylmalate dehydrogenase CV094_RS14220 PF02028 BCCT, betaine/carnitine/choline family transporter CV094_RS14225 PF07859 alpha/beta hydrolase fold CV094_RS14230 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CV094_RS14230 PF00355 Rieske [2Fe-2S] domain CV094_RS14235 PF00171 Aldehyde dehydrogenase family CV094_RS14240 PF00111 2Fe-2S iron-sulfur cluster binding domain CV094_RS14240 PF00970 Oxidoreductase FAD-binding domain CV094_RS14240 PF00175 Oxidoreductase NAD-binding domain CV094_RS14255 PF00795 Carbon-nitrogen hydrolase CV094_RS14255 PF02540 NAD synthase CV094_RS14265 PF05726 Pirin C-terminal cupin domain CV094_RS14265 PF02678 Pirin CV094_RS14270 PF03653 Uncharacterised protein family (UPF0093) CV094_RS14275 PF02801 Beta-ketoacyl synthase, C-terminal domain CV094_RS14275 PF00109 Beta-ketoacyl synthase, N-terminal domain CV094_RS14285 PF00164 Ribosomal protein S12/S23 CV094_RS14290 PF00177 Ribosomal protein S7p/S5e CV094_RS14295 PF00679 Elongation factor G C-terminus CV094_RS14295 PF03144 Elongation factor Tu domain 2 CV094_RS14295 PF14492 Elongation Factor G, domain II CV094_RS14295 PF03764 Elongation factor G, domain IV CV094_RS14295 PF00009 Elongation factor Tu GTP binding domain CV094_RS14300 PF03143 Elongation factor Tu C-terminal domain CV094_RS14300 PF03144 Elongation factor Tu domain 2 CV094_RS14300 PF00009 Elongation factor Tu GTP binding domain CV094_RS14315 PF00583 Acetyltransferase (GNAT) family CV094_RS14320 PF04376 Arginine-tRNA-protein transferase, N terminus CV094_RS14320 PF04377 Arginine-tRNA-protein transferase, C terminus CV094_RS14325 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CV094_RS14330 PF07992 Pyridine nucleotide-disulphide oxidoreductase CV094_RS14335 PF01580 FtsK/SpoIIIE family CV094_RS14335 PF09397 Ftsk gamma domain CV094_RS14335 PF17854 FtsK alpha domain CV094_RS14335 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CV094_RS14340 PF01810 LysE type translocator CV094_RS14360 PF03776 Septum formation topological specificity factor MinE CV094_RS14365 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CV094_RS14370 PF03775 Septum formation inhibitor MinC, C-terminal domain CV094_RS14380 PF01553 Acyltransferase CV094_RS14385 PF13488 Glycine zipper CV094_RS14385 PF00691 OmpA family CV094_RS14390 PF00580 UvrD/REP helicase N-terminal domain CV094_RS14390 PF13361 UvrD-like helicase C-terminal domain CV094_RS14395 PF00692 dUTPase CV094_RS14400 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CV094_RS14400 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CV094_RS14400 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CV094_RS14400 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CV094_RS14405 PF00696 Amino acid kinase family CV094_RS14415 PF13230 Glutamine amidotransferases class-II CV094_RS14420 PF01814 Hemerythrin HHE cation binding domain CV094_RS14435 PF03658 RnfH family Ubiquitin CV094_RS14440 PF04355 SmpA / OmlA family CV094_RS14445 PF01475 Ferric uptake regulator family CV094_RS14450 PF00437 Type II/IV secretion system protein CV094_RS14455 PF00437 Type II/IV secretion system protein CV094_RS14460 PF01168 Alanine racemase, N-terminal domain CV094_RS14470 PF12320 Type 5 capsule protein repressor C-terminal domain CV094_RS14470 PF00149 Calcineurin-like phosphoesterase CV094_RS14490 PF08338 Domain of unknown function (DUF1731) CV094_RS14490 PF01370 NAD dependent epimerase/dehydratase family CV094_RS14495 PF01266 FAD dependent oxidoreductase CV094_RS14500 PF00490 Delta-aminolevulinic acid dehydratase CV094_RS14505 PF03061 Thioesterase superfamily CV094_RS14510 PF13533 Biotin-lipoyl like CV094_RS14515 PF07690 Major Facilitator Superfamily CV094_RS14550 PF00929 Exonuclease CV094_RS14620 PF00145 C-5 cytosine-specific DNA methylase CV094_RS14625 PF01555 DNA methylase CV094_RS14650 PF01555 DNA methylase CV094_RS14660 PF01695 IstB-like ATP binding protein CV094_RS14705 PF07007 Lysozyme inhibitor LprI CV094_RS14855 PF05016 ParE toxin of type II toxin-antitoxin system, parDE CV094_RS14895 PF02768 DNA polymerase III beta subunit, C-terminal domain CV094_RS14895 PF00712 DNA polymerase III beta subunit, N-terminal domain CV094_RS14895 PF02767 DNA polymerase III beta subunit, central domain CV094_RS14980 PF11799 impB/mucB/samB family C-terminal domain CV094_RS14980 PF00817 impB/mucB/samB family CV094_RS14980 PF13438 Domain of unknown function (DUF4113) CV094_RS14980 PF11798 IMS family HHH motif CV094_RS14985 PF00717 Peptidase S24-like CV094_RS15040 PF00083 Sugar (and other) transporter CV094_RS15045 PF00701 Dihydrodipicolinate synthetase family CV094_RS15055 PF08281 Sigma-70, region 4 CV094_RS15055 PF04542 Sigma-70 region 2 CV094_RS15065 PF00593 TonB dependent receptor CV094_RS15065 PF07715 TonB-dependent Receptor Plug Domain CV094_RS15075 PF04575 Protein of unknown function (DUF560) CV094_RS15085 PF01126 Heme oxygenase CV094_RS15100 PF13737 Transposase DDE domain CV094_RS15115 PF13520 Amino acid permease CV094_RS15120 PF02574 Homocysteine S-methyltransferase CV094_RS15130 PF06039 Malate:quinone oxidoreductase (Mqo) CV094_RS15135 PF05199 GMC oxidoreductase CV094_RS15135 PF00732 GMC oxidoreductase CV094_RS15140 PF00171 Aldehyde dehydrogenase family CV094_RS15145 PF00440 Bacterial regulatory proteins, tetR family CV094_RS15145 PF13977 BetI-type transcriptional repressor, C-terminal CV094_RS15150 PF02028 BCCT, betaine/carnitine/choline family transporter CV094_RS15155 PF02028 BCCT, betaine/carnitine/choline family transporter CV094_RS15165 PF03061 Thioesterase superfamily CV094_RS15175 PF07683 Cobalamin synthesis protein cobW C-terminal domain CV094_RS15175 PF02492 CobW/HypB/UreG, nucleotide-binding domain CV094_RS15180 PF00375 Sodium:dicarboxylate symporter family CV094_RS15185 PF07152 YaeQ protein CV094_RS15190 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CV094_RS15195 PF14883 Hypothetical glycosyl hydrolase family 13 CV094_RS15195 PF01522 Polysaccharide deacetylase CV094_RS15200 PF00535 Glycosyl transferase family 2 CV094_RS15210 PF00378 Enoyl-CoA hydratase/isomerase CV094_RS15225 PF01614 Bacterial transcriptional regulator CV094_RS15225 PF09339 IclR helix-turn-helix domain CV094_RS15230 PF00355 Rieske [2Fe-2S] domain CV094_RS15240 PF00355 Rieske [2Fe-2S] domain CV094_RS15250 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CV094_RS15255 PF07992 Pyridine nucleotide-disulphide oxidoreductase CV094_RS15255 PF14759 Reductase C-terminal CV094_RS15260 PF07690 Major Facilitator Superfamily CV094_RS15270 PF12697 Alpha/beta hydrolase family CV094_RS15280 PF01958 Domain of unknown function DUF108 CV094_RS15280 PF03447 Homoserine dehydrogenase, NAD binding domain CV094_RS15285 PF00171 Aldehyde dehydrogenase family CV094_RS15290 PF00205 Thiamine pyrophosphate enzyme, central domain CV094_RS15290 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CV094_RS15290 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CV094_RS15300 PF07690 Major Facilitator Superfamily CV094_RS15305 PF01327 Polypeptide deformylase CV094_RS15310 PF04960 Glutaminase CV094_RS15315 PF12833 Helix-turn-helix domain CV094_RS15315 PF02311 AraC-like ligand binding domain CV094_RS15320 PF07690 Major Facilitator Superfamily CV094_RS15325 PF01263 Aldose 1-epimerase CV094_RS15340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CV094_RS15340 PF03466 LysR substrate binding domain CV094_RS15350 PF07690 Major Facilitator Superfamily CV094_RS15355 PF00456 Transketolase, thiamine diphosphate binding domain CV094_RS15360 PF02779 Transketolase, pyrimidine binding domain CV094_RS15360 PF02780 Transketolase, C-terminal domain CV094_RS15365 PF02574 Homocysteine S-methyltransferase CV094_RS15365 PF02965 Vitamin B12 dependent methionine synthase, activation domain CV094_RS15365 PF02607 B12 binding domain CV094_RS15365 PF02310 B12 binding domain CV094_RS15365 PF00809 Pterin binding enzyme CV094_RS15370 PF01384 Phosphate transporter family CV094_RS15375 PF00291 Pyridoxal-phosphate dependent enzyme CV094_RS15390 PF03781 Sulfatase-modifying factor enzyme 1 CV094_RS15395 PF00884 Sulfatase CV094_RS15405 PF01106 NifU-like domain CV094_RS15405 PF01521 Iron-sulphur cluster biosynthesis CV094_RS15410 PF07715 TonB-dependent Receptor Plug Domain CV094_RS15410 PF00593 TonB dependent receptor CV094_RS15420 PF00561 alpha/beta hydrolase fold CV094_RS15425 PF00484 Carbonic anhydrase CV094_RS15430 PF13472 GDSL-like Lipase/Acylhydrolase family CV094_RS15435 PF00005 ABC transporter CV094_RS15445 PF01694 Rhomboid family CV094_RS15450 PF00912 Transglycosylase CV094_RS15455 PF13089 Polyphosphate kinase N-terminal domain CV094_RS15455 PF17941 Polyphosphate kinase C-terminal domain 1 CV094_RS15455 PF13090 Polyphosphate kinase C-terminal domain 2 CV094_RS15455 PF02503 Polyphosphate kinase middle domain CV094_RS15465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CV094_RS15465 PF03466 LysR substrate binding domain CV094_RS15470 PF00561 alpha/beta hydrolase fold CV094_RS15475 PF07992 Pyridine nucleotide-disulphide oxidoreductase CV094_RS15475 PF18113 Rubredoxin binding C-terminal domain CV094_RS15480 PF00301 Rubredoxin CV094_RS15495 PF00152 tRNA synthetases class II (D, K and N) CV094_RS15495 PF01336 OB-fold nucleic acid binding domain CV094_RS15500 PF14052 Capsule assembly protein Wzi CV094_RS15510 PF01507 Phosphoadenosine phosphosulfate reductase family CV094_RS15515 PF00009 Elongation factor Tu GTP binding domain CV094_RS15530 PF03600 Citrate transporter CV094_RS15540 PF01595 Cyclin M transmembrane N-terminal domain CV094_RS15540 PF00571 CBS domain CV094_RS15540 PF03471 Transporter associated domain CV094_RS15545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CV094_RS15545 PF03466 LysR substrate binding domain CV094_RS15550 PF00463 Isocitrate lyase family CV094_RS15565 PF01774 UreD urease accessory protein CV094_RS15570 PF00547 Urease, gamma subunit CV094_RS15575 PF00699 Urease beta subunit CV094_RS15585 PF02814 UreE urease accessory protein, N-terminal domain CV094_RS15585 PF05194 UreE urease accessory protein, C-terminal domain CV094_RS15590 PF01730 UreF CV094_RS15595 PF02492 CobW/HypB/UreG, nucleotide-binding domain CV094_RS15610 PF03717 Penicillin-binding Protein dimerisation domain CV094_RS15610 PF00905 Penicillin binding protein transpeptidase domain CV094_RS15625 PF05191 Adenylate kinase, active site lid CV094_RS15635 PF10576 Iron-sulfur binding domain of endonuclease III CV094_RS15635 PF00633 Helix-hairpin-helix motif CV094_RS15635 PF00730 HhH-GPD superfamily base excision DNA repair protein CV094_RS15640 PF04060 Putative Fe-S cluster CV094_RS15645 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CV094_RS15645 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CV094_RS15655 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CV094_RS15660 PF02590 Predicted SPOUT methyltransferase CV094_RS15665 PF02190 ATP-dependent protease La (LON) substrate-binding domain CV094_RS15665 PF05362 Lon protease (S16) C-terminal proteolytic domain CV094_RS15665 PF00004 ATPase family associated with various cellular activities (AAA) CV094_RS15675 PF04355 SmpA / OmlA family CV094_RS15675 PF00691 OmpA family CV094_RS15680 PF01812 5-formyltetrahydrofolate cyclo-ligase family CV094_RS16005 PF01476 LysM domain CV094_RS16005 PF08525 Opacity-associated protein A N-terminal motif CV094_RS16005 PF01551 Peptidase family M23 CV094_RS16050 PF00884 Sulfatase CV094_RS16050 PF08019 Phosphoethanolamine transferase EptA/EptB CV094_RS16085 PF05195 Aminopeptidase P, N-terminal domain CV094_RS16085 PF00557 Metallopeptidase family M24 CV094_RS16090 PF01494 FAD binding domain CV094_RS16095 PF01494 FAD binding domain CV094_RS16105 PF13411 MerR HTH family regulatory protein CV094_RS16115 PF01810 LysE type translocator CV094_RS16120 PF03466 LysR substrate binding domain CV094_RS16120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CV094_RS16130 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CV094_RS16135 PF02021 Uncharacterised protein family UPF0102 CV094_RS16140 PF04972 BON domain CV094_RS16150 PF00293 NUDIX domain CV094_RS16150 PF09297 NADH pyrophosphatase zinc ribbon domain CV094_RS16160 PF00929 Exonuclease CV094_RS16165 PF01476 LysM domain CV094_RS16165 PF01464 Transglycosylase SLT domain CV094_RS16165 PF01476 LysM domain CV094_RS16165 PF01464 Transglycosylase SLT domain CV094_RS16170 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CV094_RS16175 PF00528 Binding-protein-dependent transport system inner membrane component CV094_RS16180 PF00528 Binding-protein-dependent transport system inner membrane component CV094_RS16180 PF12911 N-terminal TM domain of oligopeptide transport permease C CV094_RS16185 PF00005 ABC transporter CV094_RS16185 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CV094_RS16190 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CV094_RS16190 PF07992 Pyridine nucleotide-disulphide oxidoreductase CV094_RS16195 PF07715 TonB-dependent Receptor Plug Domain CV094_RS16195 PF00593 TonB dependent receptor CV094_RS16205 PF00929 Exonuclease CV094_RS16210 PF01979 Amidohydrolase family CV094_RS16215 PF00990 Diguanylate cyclase, GGDEF domain CV094_RS16215 PF01590 GAF domain CV094_RS16215 PF00360 Phytochrome region CV094_RS16215 PF00563 EAL domain CV094_RS16220 PF00764 Arginosuccinate synthase CV094_RS16225 PF07992 Pyridine nucleotide-disulphide oxidoreductase CV094_RS16225 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CV094_RS16240 PF05987 Bacterial protein of unknown function (DUF898) CV094_RS16245 PF03180 NLPA lipoprotein CV094_RS16260 PF13737 Transposase DDE domain CV094_RS16265 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) CV094_RS16265 PF13296 Putative type VI secretion system Rhs element Vgr CV094_RS16265 PF04717 Type VI secretion system, phage-baseplate injector CV094_RS16270 PF05593 RHS Repeat CV094_RS16270 PF03527 RHS protein CV094_RS16300 PF13737 Transposase DDE domain CV094_RS16315 PF00324 Amino acid permease CV094_RS16320 PF01266 FAD dependent oxidoreductase CV094_RS16325 PF00324 Amino acid permease CV094_RS16335 PF07729 FCD domain CV094_RS16335 PF00392 Bacterial regulatory proteins, gntR family CV094_RS16345 PF00171 Aldehyde dehydrogenase family CV094_RS16355 PF00202 Aminotransferase class-III CV094_RS16360 PF04958 Arginine N-succinyltransferase beta subunit CV094_RS16365 PF00324 Amino acid permease CV094_RS16370 PF13610 DDE domain CV094_RS16380 PF00239 Resolvase, N terminal domain CV094_RS16380 PF02796 Helix-turn-helix domain of resolvase CV094_RS16395 PF13610 DDE domain CV094_RS16400 PF13700 Domain of unknown function (DUF4158) CV094_RS16400 PF01526 Tn3 transposase DDE domain CV094_RS16405 PF00239 Resolvase, N terminal domain CV094_RS16405 PF02796 Helix-turn-helix domain of resolvase CV094_RS16410 PF13610 DDE domain CV094_RS16415 PF02796 Helix-turn-helix domain of resolvase CV094_RS16415 PF00239 Resolvase, N terminal domain CV094_RS16420 PF00563 EAL domain CV094_RS16420 PF11809 Domain of unknown function (DUF3330) CV094_RS16425 PF00589 Phage integrase family CV094_RS16425 PF13495 Phage integrase, N-terminal SAM-like domain CV094_RS16430 PF00583 Acetyltransferase (GNAT) family CV094_RS16450 PF01909 Nucleotidyltransferase domain CV094_RS16450 PF13427 Domain of unknown function (DUF4111) CV094_RS16455 PF00893 Small Multidrug Resistance protein CV094_RS16460 PF00809 Pterin binding enzyme CV094_RS16480 PF13610 DDE domain CV094_RS16485 PF02796 Helix-turn-helix domain of resolvase CV094_RS16485 PF00239 Resolvase, N terminal domain CV094_RS16495 PF13610 DDE domain CV094_RS16505 PF00106 short chain dehydrogenase CV094_RS16515 PF00440 Bacterial regulatory proteins, tetR family CV094_RS16515 PF17932 Tetracyclin repressor-like, C-terminal domain CV094_RS16520 PF02678 Pirin CV094_RS16520 PF17954 Quercetinase C-terminal cupin domain CV094_RS16530 PF00106 short chain dehydrogenase CV094_RS16535 PF00743 Flavin-binding monooxygenase-like CV094_RS16545 PF00860 Permease family CV094_RS16550 PF00962 Adenosine/AMP deaminase CV094_RS16555 PF01292 Prokaryotic cytochrome b561 CV094_RS16565 PF01351 Ribonuclease HII CV094_RS16570 PF02599 Global regulator protein family CV094_RS16575 PF00696 Amino acid kinase family CV094_RS16575 PF01842 ACT domain CV094_RS16575 PF13840 ACT domain CV094_RS16580 PF02272 DHHA1 domain CV094_RS16580 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CV094_RS16580 PF01411 tRNA synthetases class II (A) CV094_RS16585 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CV094_RS16585 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CV094_RS16590 PF13393 Histidyl-tRNA synthetase CV094_RS16595 PF00709 Adenylosuccinate synthetase CV094_RS16610 PF00248 Aldo/keto reductase family CV094_RS16620 PF00027 Cyclic nucleotide-binding domain CV094_RS16620 PF13545 Crp-like helix-turn-helix domain CV094_RS16625 PF02566 OsmC-like protein CV094_RS16640 PF10431 C-terminal, D2-small domain, of ClpB protein CV094_RS16640 PF02861 Clp amino terminal domain, pathogenicity island component CV094_RS16640 PF17871 AAA lid domain CV094_RS16640 PF07724 AAA domain (Cdc48 subfamily) CV094_RS16640 PF00004 ATPase family associated with various cellular activities (AAA) CV094_RS16655 PF10672 S-adenosylmethionine-dependent methyltransferase CV094_RS16655 PF02926 THUMP domain CV094_RS16655 PF01170 Putative RNA methylase family UPF0020 CV094_RS16665 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CV094_RS16665 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CV094_RS16670 PF01979 Amidohydrolase family CV094_RS16675 PF00691 OmpA family CV094_RS16675 PF13488 Glycine zipper CV094_RS16685 PF00043 Glutathione S-transferase, C-terminal domain CV094_RS16685 PF13417 Glutathione S-transferase, N-terminal domain CV094_RS16690 PF02390 Putative methyltransferase CV094_RS16700 PF00043 Glutathione S-transferase, C-terminal domain CV094_RS16700 PF02798 Glutathione S-transferase, N-terminal domain CV094_RS16710 PF07992 Pyridine nucleotide-disulphide oxidoreductase CV094_RS16710 PF13192 Thioredoxin domain CV094_RS16730 PF00578 AhpC/TSA family CV094_RS16730 PF10417 C-terminal domain of 1-Cys peroxiredoxin CV094_RS16735 PF00270 DEAD/DEAH box helicase CV094_RS16735 PF04408 Helicase associated domain (HA2) CV094_RS16735 PF00271 Helicase conserved C-terminal domain CV094_RS16735 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CV094_RS16735 PF11898 Domain of unknown function (DUF3418) CV094_RS16740 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CV094_RS16740 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CV094_RS16750 PF07690 Major Facilitator Superfamily CV094_RS16755 PF03594 Benzoate membrane transport protein CV094_RS16760 PF00106 short chain dehydrogenase CV094_RS16765 PF00970 Oxidoreductase FAD-binding domain CV094_RS16765 PF00111 2Fe-2S iron-sulfur cluster binding domain CV094_RS16765 PF00175 Oxidoreductase NAD-binding domain CV094_RS16770 PF00866 Ring hydroxylating beta subunit CV094_RS16775 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CV094_RS16775 PF00355 Rieske [2Fe-2S] domain CV094_RS16780 PF03466 LysR substrate binding domain CV094_RS16780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CV094_RS16790 PF00403 Heavy-metal-associated domain CV094_RS16795 PF09278 MerR, DNA binding CV094_RS16795 PF00376 MerR family regulatory protein CV094_RS16835 PF13742 OB-fold nucleic acid binding domain CV094_RS16835 PF02601 Exonuclease VII, large subunit CV094_RS16870 PF01810 LysE type translocator CV094_RS16875 PF00313 'Cold-shock' DNA-binding domain CV094_RS16885 PF14748 Pyrroline-5-carboxylate reductase dimerisation CV094_RS16885 PF03807 NADP oxidoreductase coenzyme F420-dependent CV094_RS16915 PF07690 Major Facilitator Superfamily CV094_RS16920 PF01638 HxlR-like helix-turn-helix CV094_RS16950 PF01406 tRNA synthetases class I (C) catalytic domain CV094_RS16950 PF09190 DALR domain CV094_RS16955 PF01380 SIS domain CV094_RS16955 PF00571 CBS domain CV094_RS16970 PF03968 OstA-like protein CV094_RS16975 PF12399 Branched-chain amino acid ATP-binding cassette transporter CV094_RS16975 PF00005 ABC transporter CV094_RS16980 PF02321 Outer membrane efflux protein CV094_RS16985 PF00005 ABC transporter CV094_RS16985 PF00664 ABC transporter transmembrane region CV094_RS16985 PF03412 Peptidase C39 family CV094_RS16995 PF01205 Uncharacterized protein family UPF0029 CV094_RS17000 PF00132 Bacterial transferase hexapeptide (six repeats) CV094_RS17010 PF01596 O-methyltransferase CV094_RS17020 PF00037 4Fe-4S binding domain CV094_RS17020 PF11953 Domain of unknown function (DUF3470) CV094_RS17030 PF05188 MutS domain II CV094_RS17030 PF05190 MutS family domain IV CV094_RS17030 PF00488 MutS domain V CV094_RS17030 PF05192 MutS domain III CV094_RS17030 PF01624 MutS domain I CV094_RS17035 PF01037 Lrp/AsnC ligand binding domain CV094_RS17040 PF00892 EamA-like transporter family CV094_RS17045 PF00563 EAL domain CV094_RS17045 PF03707 Bacterial signalling protein N terminal repeat CV094_RS17045 PF00990 Diguanylate cyclase, GGDEF domain CV094_RS17050 PF03279 Bacterial lipid A biosynthesis acyltransferase CV094_RS17060 PF07690 Major Facilitator Superfamily CV094_RS17080 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CV094_RS17080 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CV094_RS17100 PF13419 Haloacid dehalogenase-like hydrolase CV094_RS17115 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) CV094_RS17115 PF04717 Type VI secretion system, phage-baseplate injector CV094_RS17115 PF13296 Putative type VI secretion system Rhs element Vgr CV094_RS17120 PF05593 RHS Repeat CV094_RS17120 PF03527 RHS protein CV094_RS17135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CV094_RS17135 PF03466 LysR substrate binding domain CV094_RS17140 PF01566 Natural resistance-associated macrophage protein CV094_RS17145 PF03746 LamB/YcsF family CV094_RS17150 PF07286 Protein of unknown function (DUF1445) CV094_RS17160 PF02785 Biotin carboxylase C-terminal domain CV094_RS17160 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CV094_RS17160 PF00364 Biotin-requiring enzyme CV094_RS17160 PF00289 Biotin carboxylase, N-terminal domain CV094_RS17165 PF00654 Voltage gated chloride channel CV094_RS17170 PF13610 DDE domain CV094_RS17195 PF13610 DDE domain CV094_RS17205 PF00528 Binding-protein-dependent transport system inner membrane component CV094_RS17210 PF09383 NIL domain CV094_RS17210 PF00005 ABC transporter CV094_RS17215 PF03180 NLPA lipoprotein CV094_RS17220 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CV094_RS17220 PF02843 Phosphoribosylglycinamide synthetase, C domain CV094_RS17220 PF02844 Phosphoribosylglycinamide synthetase, N domain CV094_RS17225 PF01808 AICARFT/IMPCHase bienzyme CV094_RS17225 PF02142 MGS-like domain CV094_RS17230 PF02954 Bacterial regulatory protein, Fis family CV094_RS17250 PF01134 Glucose inhibited division protein A CV094_RS17250 PF13932 GidA associated domain CV094_RS17260 PF14403 Circularly permuted ATP-grasp type 2 CV094_RS17270 PF08379 Bacterial transglutaminase-like N-terminal region CV094_RS17270 PF01841 Transglutaminase-like superfamily CV094_RS17280 PF00842 Alanine racemase, C-terminal domain CV094_RS17280 PF01168 Alanine racemase, N-terminal domain CV094_RS17285 PF03796 DnaB-like helicase C terminal domain CV094_RS17285 PF00772 DnaB-like helicase N terminal domain CV094_RS17290 PF03948 Ribosomal protein L9, C-terminal domain CV094_RS17290 PF01281 Ribosomal protein L9, N-terminal domain CV094_RS17295 PF01084 Ribosomal protein S18 CV094_RS17300 PF01250 Ribosomal protein S6 CV094_RS17305 PF01040 UbiA prenyltransferase family CV094_RS17310 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CV094_RS17315 PF00510 Cytochrome c oxidase subunit III CV094_RS17320 PF00115 Cytochrome C and Quinol oxidase polypeptide I CV094_RS17325 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CV094_RS17325 PF06481 COX Aromatic Rich Motif CV094_RS17335 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CV094_RS17335 PF02896 PEP-utilising enzyme, TIM barrel domain CV094_RS17335 PF00391 PEP-utilising enzyme, mobile domain CV094_RS17340 PF03618 Kinase/pyrophosphorylase CV094_RS17350 PF14883 Hypothetical glycosyl hydrolase family 13 CV094_RS17350 PF01522 Polysaccharide deacetylase CV094_RS17355 PF00535 Glycosyl transferase family 2 CV094_RS17370 PF00296 Luciferase-like monooxygenase CV094_RS17390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CV094_RS17390 PF03466 LysR substrate binding domain CV094_RS17400 PF00472 RF-1 domain CV094_RS17400 PF03462 PCRF domain CV094_RS17405 PF17827 PrmC N-terminal domain CV094_RS17405 PF13847 Methyltransferase domain CV094_RS17410 PF00528 Binding-protein-dependent transport system inner membrane component CV094_RS17415 PF09084 NMT1/THI5 like CV094_RS17420 PF12833 Helix-turn-helix domain CV094_RS17425 PF00106 short chain dehydrogenase CV094_RS17430 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CV094_RS17430 PF02770 Acyl-CoA dehydrogenase, middle domain CV094_RS17430 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CV094_RS17435 PF13193 AMP-binding enzyme C-terminal domain CV094_RS17435 PF00501 AMP-binding enzyme CV094_RS17440 PF01613 Flavin reductase like domain CV094_RS17445 PF00899 ThiF family CV094_RS17450 PF03109 ABC1 family CV094_RS17465 PF03814 Potassium-transporting ATPase A subunit CV094_RS17475 PF02669 K+-transporting ATPase, c chain CV094_RS17480 PF13493 Domain of unknown function (DUF4118) CV094_RS17480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CV094_RS17480 PF02702 Osmosensitive K+ channel His kinase sensor domain CV094_RS17480 PF00512 His Kinase A (phospho-acceptor) domain CV094_RS17485 PF00486 Transcriptional regulatory protein, C terminal CV094_RS17485 PF00072 Response regulator receiver domain CV094_RS17490 PF00120 Glutamine synthetase, catalytic domain CV094_RS17500 PF03232 Ubiquinone biosynthesis protein COQ7 CV094_RS17505 PF07690 Major Facilitator Superfamily CV094_RS17510 PF01103 Surface antigen CV094_RS17510 PF07244 Surface antigen variable number repeat CV094_RS17510 PF17243 POTRA domain TamA domain 1 CV094_RS17530 PF00330 Aconitase family (aconitate hydratase) CV094_RS17530 PF11791 Aconitate B N-terminal domain CV094_RS17530 PF06434 Aconitate hydratase 2 N-terminus CV094_RS17540 PF00027 Cyclic nucleotide-binding domain CV094_RS17540 PF00520 Ion transport protein CV094_RS17545 PF07690 Major Facilitator Superfamily CV094_RS17560 PF03466 LysR substrate binding domain CV094_RS17560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CV094_RS17565 PF04284 Protein of unknown function (DUF441) CV094_RS17575 PF01479 S4 domain CV094_RS17575 PF00849 RNA pseudouridylate synthase CV094_RS17590 PF00849 RNA pseudouridylate synthase CV094_RS17590 PF01479 S4 domain CV094_RS17595 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CV094_RS17600 PF08676 MutL C terminal dimerisation domain CV094_RS17600 PF01119 DNA mismatch repair protein, C-terminal domain CV094_RS17610 PF17209 Hfq protein CV094_RS17620 PF00881 Nitroreductase family CV094_RS17630 PF00149 Calcineurin-like phosphoesterase CV094_RS17635 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CV094_RS17640 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CV094_RS17640 PF00749 tRNA synthetases class I (E and Q), catalytic domain CV094_RS17645 PF00117 Glutamine amidotransferase class-I CV094_RS17645 PF02540 NAD synthase CV094_RS17645 PF00958 GMP synthase C terminal domain CV094_RS17650 PF05985 Ethanolamine ammonia-lyase light chain (EutC) CV094_RS17655 PF06751 Ethanolamine ammonia lyase large subunit (EutB) CV094_RS17660 PF13520 Amino acid permease CV094_RS17665 PF00171 Aldehyde dehydrogenase family CV094_RS17680 PF00465 Iron-containing alcohol dehydrogenase CV094_RS17685 PF05970 PIF1-like helicase CV094_RS17685 PF14493 Helix-turn-helix domain CV094_RS17695 PF06445 GyrI-like small molecule binding domain CV094_RS17700 PF02110 Hydroxyethylthiazole kinase family CV094_RS17715 PF17432 Domain of unknown function (DUF3458_C) ARM repeats CV094_RS17715 PF11940 Domain of unknown function (DUF3458) Ig-like fold CV094_RS17715 PF01433 Peptidase family M1 domain CV094_RS17725 PF00106 short chain dehydrogenase CV094_RS17735 PF01817 Chorismate mutase type II CV094_RS17740 PF01037 Lrp/AsnC ligand binding domain CV094_RS17755 PF00440 Bacterial regulatory proteins, tetR family CV094_RS17760 PF00593 TonB dependent receptor CV094_RS17760 PF07715 TonB-dependent Receptor Plug Domain CV094_RS17765 PF00924 Mechanosensitive ion channel CV094_RS17800 PF00593 TonB dependent receptor CV094_RS17800 PF07715 TonB-dependent Receptor Plug Domain CV094_RS17820 PF00005 ABC transporter CV094_RS17820 PF12848 ABC transporter CV094_RS17825 PF00582 Universal stress protein family CV094_RS17840 PF00690 Cation transporter/ATPase, N-terminus CV094_RS17840 PF00689 Cation transporting ATPase, C-terminus CV094_RS17845 PF02308 MgtC family CV094_RS17850 PF03594 Benzoate membrane transport protein CV094_RS17855 PF01037 Lrp/AsnC ligand binding domain CV094_RS17860 PF01810 LysE type translocator CV094_RS17865 PF00923 Transaldolase/Fructose-6-phosphate aldolase CV094_RS17870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CV094_RS17870 PF03466 LysR substrate binding domain CV094_RS17880 PF02803 Thiolase, C-terminal domain CV094_RS17880 PF00108 Thiolase, N-terminal domain CV094_RS17890 PF01575 MaoC like domain CV094_RS17895 PF00144 Beta-lactamase CV094_RS17905 PF07690 Major Facilitator Superfamily CV094_RS17910 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CV094_RS17910 PF12169 DNA polymerase III subunits gamma and tau domain III CV094_RS17910 PF12170 DNA polymerase III tau subunit V interacting with alpha CV094_RS17915 PF05506 Domain of unknown function (DUF756) CV094_RS17915 PF04185 Phosphoesterase family CV094_RS17920 PF03061 Thioesterase superfamily CV094_RS17925 PF00465 Iron-containing alcohol dehydrogenase CV094_RS17935 PF01451 Low molecular weight phosphotyrosine protein phosphatase CV094_RS17940 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CV094_RS17940 PF01565 FAD binding domain CV094_RS17955 PF01645 Conserved region in glutamate synthase CV094_RS18240 PF01476 LysM domain CV094_RS18240 PF01551 Peptidase family M23 CV094_RS18240 PF08525 Opacity-associated protein A N-terminal motif CV094_RS18310 PF12832 MFS_1 like family CV094_RS18320 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CV094_RS18320 PF00289 Biotin carboxylase, N-terminal domain CV094_RS18320 PF02785 Biotin carboxylase C-terminal domain CV094_RS18325 PF00364 Biotin-requiring enzyme CV094_RS18330 PF01220 Dehydroquinase class II CV094_RS18335 PF11799 impB/mucB/samB family C-terminal domain CV094_RS18335 PF00817 impB/mucB/samB family CV094_RS18335 PF13438 Domain of unknown function (DUF4113) CV094_RS18345 PF00005 ABC transporter CV094_RS18350 PF00072 Response regulator receiver domain CV094_RS18350 PF00486 Transcriptional regulatory protein, C terminal CV094_RS18360 PF18267 Rubredoxin NAD+ reductase C-terminal domain CV094_RS18360 PF13806 Rieske-like [2Fe-2S] domain CV094_RS18360 PF07992 Pyridine nucleotide-disulphide oxidoreductase CV094_RS18360 PF04324 BFD-like [2Fe-2S] binding domain CV094_RS18360 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CV094_RS18360 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CV094_RS18365 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CV094_RS18365 PF04324 BFD-like [2Fe-2S] binding domain CV094_RS18365 PF07992 Pyridine nucleotide-disulphide oxidoreductase CV094_RS18365 PF18267 Rubredoxin NAD+ reductase C-terminal domain CV094_RS18365 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CV094_RS18370 PF01568 Molydopterin dinucleotide binding domain CV094_RS18370 PF00384 Molybdopterin oxidoreductase CV094_RS18370 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CV094_RS18370 PF04324 BFD-like [2Fe-2S] binding domain CV094_RS18375 PF12804 MobA-like NTP transferase domain CV094_RS18380 PF01568 Molydopterin dinucleotide binding domain CV094_RS18380 PF00384 Molybdopterin oxidoreductase CV094_RS18380 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CV094_RS18385 PF06463 Molybdenum Cofactor Synthesis C CV094_RS18385 PF04055 Radical SAM superfamily CV094_RS18395 PF02391 MoaE protein CV094_RS18400 PF01967 MoaC family CV094_RS18400 PF00994 Probable molybdopterin binding domain CV094_RS18405 PF00994 Probable molybdopterin binding domain CV094_RS18405 PF03454 MoeA C-terminal region (domain IV) CV094_RS18405 PF03453 MoeA N-terminal region (domain I and II) CV094_RS18410 PF01638 HxlR-like helix-turn-helix CV094_RS18415 PF00392 Bacterial regulatory proteins, gntR family CV094_RS18415 PF00155 Aminotransferase class I and II CV094_RS18420 PF00892 EamA-like transporter family CV094_RS18440 PF02635 DsrE/DsrF-like family CV094_RS18445 PF16363 GDP-mannose 4,6 dehydratase CV094_RS18450 PF00206 Lyase CV094_RS18450 PF10415 Fumarase C C-terminus CV094_RS18475 PF01266 FAD dependent oxidoreductase CV094_RS18485 PF02542 YgbB family CV094_RS18495 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CV094_RS18495 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CV094_RS18500 PF00440 Bacterial regulatory proteins, tetR family CV094_RS18505 PF00158 Sigma-54 interaction domain CV094_RS18505 PF00072 Response regulator receiver domain CV094_RS18505 PF02954 Bacterial regulatory protein, Fis family CV094_RS18510 PF00989 PAS fold CV094_RS18510 PF00512 His Kinase A (phospho-acceptor) domain CV094_RS18510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CV094_RS18515 PF18693 TRAM domain CV094_RS18515 PF00919 Uncharacterized protein family UPF0004 CV094_RS18515 PF04055 Radical SAM superfamily CV094_RS18520 PF00696 Amino acid kinase family CV094_RS18525 PF01765 Ribosome recycling factor CV094_RS18530 PF01255 Putative undecaprenyl diphosphate synthase CV094_RS18540 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CV094_RS18540 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CV094_RS18540 PF13288 DXP reductoisomerase C-terminal domain CV094_RS18545 PF17820 PDZ domain CV094_RS18545 PF13180 PDZ domain CV094_RS18545 PF02163 Peptidase family M50 CV094_RS18550 PF01103 Surface antigen CV094_RS18550 PF07244 Surface antigen variable number repeat CV094_RS18560 PF00132 Bacterial transferase hexapeptide (six repeats) CV094_RS18560 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CV094_RS18565 PF07977 FabA-like domain CV094_RS18570 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CV094_RS18570 PF00132 Bacterial transferase hexapeptide (six repeats) CV094_RS18585 PF02631 RecX family CV094_RS18590 PF00154 recA bacterial DNA recombination protein CV094_RS18595 PF01479 S4 domain CV094_RS18600 PF13419 Haloacid dehalogenase-like hydrolase CV094_RS18625 PF01037 Lrp/AsnC ligand binding domain CV094_RS18635 PF00324 Amino acid permease CV094_RS18645 PF00082 Subtilase family CV094_RS18645 PF05922 Peptidase inhibitor I9 CV094_RS18650 PF00916 Sulfate permease family CV094_RS18650 PF01740 STAS domain CV094_RS18655 PF02586 SOS response associated peptidase (SRAP) CV094_RS18660 PF07995 Glucose / Sorbosone dehydrogenase CV094_RS18670 PF00563 EAL domain CV094_RS18670 PF00990 Diguanylate cyclase, GGDEF domain CV094_RS18670 PF03707 Bacterial signalling protein N terminal repeat CV094_RS18690 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CV094_RS18690 PF02378 Phosphotransferase system, EIIC CV094_RS18695 PF00294 pfkB family carbohydrate kinase CV094_RS18700 PF02896 PEP-utilising enzyme, TIM barrel domain CV094_RS18700 PF00391 PEP-utilising enzyme, mobile domain CV094_RS18700 PF05524 PEP-utilising enzyme, N-terminal CV094_RS18700 PF00381 PTS HPr component phosphorylation site CV094_RS18700 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CV094_RS18725 PF05525 Branched-chain amino acid transport protein CV094_RS18730 PF00557 Metallopeptidase family M24 CV094_RS18735 PF03466 LysR substrate binding domain CV094_RS18735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CV094_RS18745 PF00462 Glutaredoxin CV094_RS18750 PF00202 Aminotransferase class-III CV094_RS18755 PF00571 CBS domain CV094_RS18755 PF00478 IMP dehydrogenase / GMP reductase domain CV094_RS18780 PF00448 SRP54-type protein, GTPase domain CV094_RS18780 PF02881 SRP54-type protein, helical bundle domain CV094_RS18790 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) CV094_RS18805 PF08173 Membrane bound YbgT-like protein CV094_RS18810 PF02322 Cytochrome bd terminal oxidase subunit II CV094_RS18815 PF01654 Cytochrome bd terminal oxidase subunit I CV094_RS18830 PF07290 Protein of unknown function (DUF1449) CV094_RS18840 PF00294 pfkB family carbohydrate kinase CV094_RS18845 PF07715 TonB-dependent Receptor Plug Domain CV094_RS18845 PF00593 TonB dependent receptor CV094_RS18850 PF08367 Peptidase M16C associated CV094_RS18850 PF00675 Insulinase (Peptidase family M16) CV094_RS18850 PF05193 Peptidase M16 inactive domain CV094_RS18855 PF02253 Phospholipase A1 CV094_RS18860 PF02386 Cation transport protein CV094_RS18865 PF02080 TrkA-C domain CV094_RS18865 PF02254 TrkA-N domain CV094_RS18870 PF00585 C-terminal regulatory domain of Threonine dehydratase CV094_RS18870 PF00291 Pyridoxal-phosphate dependent enzyme CV094_RS18875 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CV094_RS18890 PF01118 Semialdehyde dehydrogenase, NAD binding domain CV094_RS18890 PF02774 Semialdehyde dehydrogenase, dimerisation domain CV094_RS18900 PF02617 ATP-dependent Clp protease adaptor protein ClpS CV094_RS18905 PF07724 AAA domain (Cdc48 subfamily) CV094_RS18905 PF17871 AAA lid domain CV094_RS18905 PF00004 ATPase family associated with various cellular activities (AAA) CV094_RS18905 PF02861 Clp amino terminal domain, pathogenicity island component CV094_RS18905 PF10431 C-terminal, D2-small domain, of ClpB protein CV094_RS18910 PF02694 Uncharacterised BCR, YnfA/UPF0060 family CV094_RS18915 PF00793 DAHP synthetase I family CV094_RS18930 PF07992 Pyridine nucleotide-disulphide oxidoreductase CV094_RS18930 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CV094_RS18960 PF00117 Glutamine amidotransferase class-I CV094_RS18960 PF06418 CTP synthase N-terminus CV094_RS18965 PF00793 DAHP synthetase I family CV094_RS18970 PF00113 Enolase, C-terminal TIM barrel domain CV094_RS18970 PF03952 Enolase, N-terminal domain CV094_RS18975 PF04239 Protein of unknown function (DUF421) CV094_RS18980 PF04977 Septum formation initiator CV094_RS18985 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CV094_RS18990 PF01144 Coenzyme A transferase CV094_RS18995 PF01144 Coenzyme A transferase CV094_RS19000 PF00108 Thiolase, N-terminal domain CV094_RS19000 PF02803 Thiolase, C-terminal domain CV094_RS19005 PF00206 Lyase CV094_RS19005 PF10397 Adenylosuccinate lyase C-terminus CV094_RS19010 PF00561 alpha/beta hydrolase fold CV094_RS19015 PF07690 Major Facilitator Superfamily CV094_RS19020 PF02627 Carboxymuconolactone decarboxylase family CV094_RS19025 PF00775 Dioxygenase CV094_RS19025 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal CV094_RS19030 PF00775 Dioxygenase CV094_RS19035 PF01487 Type I 3-dehydroquinase CV094_RS19040 PF05048 Periplasmic copper-binding protein (NosD) CV094_RS19045 PF04966 Carbohydrate-selective porin, OprB family CV094_RS19050 PF01011 PQQ enzyme repeat CV094_RS19050 PF13360 PQQ-like domain CV094_RS19060 PF04143 Sulphur transport CV094_RS19070 PF00753 Metallo-beta-lactamase superfamily CV094_RS19075 PF01614 Bacterial transcriptional regulator CV094_RS19075 PF09339 IclR helix-turn-helix domain CV094_RS19080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CV094_RS19080 PF03466 LysR substrate binding domain CV094_RS19085 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CV094_RS19085 PF02770 Acyl-CoA dehydrogenase, middle domain CV094_RS19085 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CV094_RS19100 PF00106 short chain dehydrogenase CV094_RS19110 PF07690 Major Facilitator Superfamily CV094_RS19120 PF01425 Amidase CV094_RS19125 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CV094_RS19140 PF00355 Rieske [2Fe-2S] domain CV094_RS19140 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CV094_RS19155 PF00175 Oxidoreductase NAD-binding domain CV094_RS19155 PF00111 2Fe-2S iron-sulfur cluster binding domain CV094_RS19160 PF01613 Flavin reductase like domain CV094_RS19165 PF12833 Helix-turn-helix domain CV094_RS19165 PF02311 AraC-like ligand binding domain CV094_RS19170 PF02728 Copper amine oxidase, N3 domain CV094_RS19170 PF07833 Copper amine oxidase N-terminal domain CV094_RS19170 PF01179 Copper amine oxidase, enzyme domain CV094_RS19170 PF02727 Copper amine oxidase, N2 domain CV094_RS19180 PF00171 Aldehyde dehydrogenase family CV094_RS19185 PF01804 Penicillin amidase CV094_RS19190 PF12146 Serine aminopeptidase, S33 CV094_RS19195 PF00108 Thiolase, N-terminal domain CV094_RS19195 PF02803 Thiolase, C-terminal domain CV094_RS19200 PF01144 Coenzyme A transferase CV094_RS19205 PF01144 Coenzyme A transferase CV094_RS19210 PF04444 Catechol dioxygenase N terminus CV094_RS19210 PF00775 Dioxygenase CV094_RS19215 PF02426 Muconolactone delta-isomerase CV094_RS19220 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CV094_RS19220 PF13378 Enolase C-terminal domain-like CV094_RS19225 PF03466 LysR substrate binding domain CV094_RS19225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CV094_RS19235 PF00392 Bacterial regulatory proteins, gntR family CV094_RS19235 PF07729 FCD domain CV094_RS19240 PF00920 Dehydratase family CV094_RS19245 PF07690 Major Facilitator Superfamily CV094_RS19255 PF00171 Aldehyde dehydrogenase family CV094_RS19275 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CV094_RS19275 PF02770 Acyl-CoA dehydrogenase, middle domain CV094_RS19275 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CV094_RS19285 PF00158 Sigma-54 interaction domain CV094_RS19285 PF06506 Propionate catabolism activator CV094_RS19285 PF02954 Bacterial regulatory protein, Fis family CV094_RS19295 PF06986 Type-1V conjugative transfer system mating pair stabilisation CV094_RS19310 PF06122 Conjugative relaxosome accessory transposon protein CV094_RS19330 PF00817 impB/mucB/samB family CV094_RS19330 PF13438 Domain of unknown function (DUF4113) CV094_RS19330 PF11799 impB/mucB/samB family C-terminal domain CV094_RS19420 PF00565 Staphylococcal nuclease homologue CV094_RS19425 PF00816 H-NS histone family CV094_RS19485 PF13614 AAA domain CV094_RS19490 PF17762 HTH domain found in ParB protein CV094_RS19490 PF02195 ParB-like nuclease domain CV094_RS19510 PF05816 Toxic anion resistance protein (TelA) CV094_RS19665 PF07057 DNA helicase TraI CV094_RS19665 PF18272 single-stranded DNA binding TraI N-terminal subdomain CV094_RS19665 PF08751 TrwC relaxase CV094_RS19665 PF18340 DNA relaxase TraI 2B/2B-like domain CV094_RS19685 PF13737 Transposase DDE domain CV094_RS19710 PF00239 Resolvase, N terminal domain CV094_RS19710 PF02796 Helix-turn-helix domain of resolvase CV094_RS19725 PF01464 Transglycosylase SLT domain CV094_RS19760 PF13098 Thioredoxin-like domain CV094_RS19760 PF10411 Disulfide bond isomerase protein N-terminus CV094_RS19795 PF06834 TraU protein