locus-tag class description KQ254_RS00010 PF00563 EAL domain KQ254_RS00010 PF00990 Diguanylate cyclase, GGDEF domain KQ254_RS00010 PF03707 Bacterial signalling protein N terminal repeat KQ254_RS00015 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KQ254_RS00015 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KQ254_RS00020 PF10369 Small subunit of acetolactate synthase KQ254_RS00025 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KQ254_RS00025 PF00205 Thiamine pyrophosphate enzyme, central domain KQ254_RS00025 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KQ254_RS00035 PF09334 tRNA synthetases class I (M) KQ254_RS00035 PF13603 Leucyl-tRNA synthetase, Domain 2 KQ254_RS00035 PF00133 tRNA synthetases class I (I, L, M and V) KQ254_RS00035 PF08264 Anticodon-binding domain of tRNA KQ254_RS00050 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KQ254_RS00055 PF00005 ABC transporter KQ254_RS00055 PF02687 FtsX-like permease family KQ254_RS00055 PF12704 MacB-like periplasmic core domain KQ254_RS00060 PF02321 Outer membrane efflux protein KQ254_RS00075 PF00929 Exonuclease KQ254_RS00080 PF03193 RsgA GTPase KQ254_RS00090 PF00462 Glutaredoxin KQ254_RS00095 PF02556 Preprotein translocase subunit SecB KQ254_RS00105 PF01926 50S ribosome-binding GTPase KQ254_RS00105 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KQ254_RS00110 PF13360 PQQ-like domain KQ254_RS00120 PF13393 Histidyl-tRNA synthetase KQ254_RS00120 PF03129 Anticodon binding domain KQ254_RS00125 PF04551 GcpE protein KQ254_RS00130 PF13464 Domain of unknown function (DUF4115) KQ254_RS00140 PF04055 Radical SAM superfamily KQ254_RS00145 PF00334 Nucleoside diphosphate kinase KQ254_RS00150 PF04384 Iron-sulphur cluster assembly KQ254_RS00155 PF01569 PAP2 superfamily KQ254_RS00160 PF00534 Glycosyl transferases group 1 KQ254_RS00160 PF13439 Glycosyltransferase Family 4 KQ254_RS00165 PF00595 PDZ domain KQ254_RS00165 PF17804 Tail specific protease N-terminal domain KQ254_RS00165 PF03572 Peptidase family S41 KQ254_RS00165 PF11818 C-terminal domain of tail specific protease (DUF3340) KQ254_RS00170 PF00933 Glycosyl hydrolase family 3 N terminal domain KQ254_RS00180 PF00561 alpha/beta hydrolase fold KQ254_RS00185 PF00171 Aldehyde dehydrogenase family KQ254_RS00190 PF00171 Aldehyde dehydrogenase family KQ254_RS00195 PF01202 Shikimate kinase KQ254_RS00200 PF02447 GntP family permease KQ254_RS00205 PF01081 KDPG and KHG aldolase KQ254_RS00210 PF00920 Dehydratase family KQ254_RS00215 PF00871 Acetokinase family KQ254_RS00220 PF01515 Phosphate acetyl/butaryl transferase KQ254_RS00220 PF07085 DRTGG domain KQ254_RS00225 PF05683 Fumarase C-terminus KQ254_RS00225 PF05681 Fumarate hydratase (Fumerase) KQ254_RS00240 PF10431 C-terminal, D2-small domain, of ClpB protein KQ254_RS00240 PF06689 ClpX C4-type zinc finger KQ254_RS00240 PF07724 AAA domain (Cdc48 subfamily) KQ254_RS00245 PF00574 Clp protease KQ254_RS00250 PF05697 Bacterial trigger factor protein (TF) KQ254_RS00250 PF05698 Bacterial trigger factor protein (TF) C-terminus KQ254_RS00250 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KQ254_RS00255 PF00593 TonB dependent receptor KQ254_RS00255 PF07715 TonB-dependent Receptor Plug Domain KQ254_RS00260 PF13640 2OG-Fe(II) oxygenase superfamily KQ254_RS00260 PF18331 PKHD-type hydroxylase C-terminal domain KQ254_RS00265 PF00682 HMGL-like KQ254_RS00265 PF08502 LeuA allosteric (dimerisation) domain KQ254_RS00270 PF00561 alpha/beta hydrolase fold KQ254_RS00275 PF07021 Methionine biosynthesis protein MetW KQ254_RS00275 PF00561 alpha/beta hydrolase fold KQ254_RS00285 PF01725 Ham1 family KQ254_RS00295 PF02416 mttA/Hcf106 family KQ254_RS00300 PF02416 mttA/Hcf106 family KQ254_RS00305 PF00902 Sec-independent protein translocase protein (TatC) KQ254_RS00325 PF01790 Prolipoprotein diacylglyceryl transferase KQ254_RS00340 PF00303 Thymidylate synthase KQ254_RS00345 PF00186 Dihydrofolate reductase KQ254_RS00355 PF01625 Peptide methionine sulfoxide reductase KQ254_RS00365 PF01618 MotA/TolQ/ExbB proton channel family KQ254_RS00375 PF01842 ACT domain KQ254_RS00375 PF00551 Formyl transferase KQ254_RS00385 PF00171 Aldehyde dehydrogenase family KQ254_RS00390 PF00830 Ribosomal L28 family KQ254_RS00395 PF00471 Ribosomal protein L33 KQ254_RS00400 PF02254 TrkA-N domain KQ254_RS00400 PF00999 Sodium/hydrogen exchanger family KQ254_RS00420 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) KQ254_RS00425 PF00580 UvrD/REP helicase N-terminal domain KQ254_RS00425 PF13361 UvrD-like helicase C-terminal domain KQ254_RS00440 PF01131 DNA topoisomerase KQ254_RS00440 PF01396 Topoisomerase DNA binding C4 zinc finger KQ254_RS00440 PF01751 Toprim domain KQ254_RS00440 PF08272 Topoisomerase I zinc-ribbon-like KQ254_RS00450 PF01638 HxlR-like helix-turn-helix KQ254_RS00455 PF08240 Alcohol dehydrogenase GroES-like domain KQ254_RS00455 PF00107 Zinc-binding dehydrogenase KQ254_RS00460 PF04102 SlyX KQ254_RS00465 PF00005 ABC transporter KQ254_RS00465 PF16326 ABC transporter C-terminal domain KQ254_RS00465 PF12848 ABC transporter KQ254_RS00470 PF01810 LysE type translocator KQ254_RS00475 PF03279 Bacterial lipid A biosynthesis acyltransferase KQ254_RS00485 PF00375 Sodium:dicarboxylate symporter family KQ254_RS00495 PF02774 Semialdehyde dehydrogenase, dimerisation domain KQ254_RS00495 PF01118 Semialdehyde dehydrogenase, NAD binding domain KQ254_RS00515 PF01416 tRNA pseudouridine synthase KQ254_RS00525 PF01176 Translation initiation factor 1A / IF-1 KQ254_RS00540 PF00180 Isocitrate/isopropylmalate dehydrogenase KQ254_RS00550 PF00694 Aconitase C-terminal domain KQ254_RS00555 PF00330 Aconitase family (aconitate hydratase) KQ254_RS00565 PF03466 LysR substrate binding domain KQ254_RS00565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ254_RS00575 PF00293 NUDIX domain KQ254_RS00580 PF01590 GAF domain KQ254_RS00580 PF05524 PEP-utilising enzyme, N-terminal KQ254_RS00580 PF00391 PEP-utilising enzyme, mobile domain KQ254_RS00580 PF02896 PEP-utilising enzyme, TIM barrel domain KQ254_RS00585 PF00141 Peroxidase KQ254_RS00590 PF12706 Beta-lactamase superfamily domain KQ254_RS00595 PF03466 LysR substrate binding domain KQ254_RS00595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ254_RS00605 PF02798 Glutathione S-transferase, N-terminal domain KQ254_RS00610 PF13280 WYL domain KQ254_RS00610 PF08279 HTH domain KQ254_RS00615 PF13419 Haloacid dehalogenase-like hydrolase KQ254_RS00620 PF01479 S4 domain KQ254_RS00620 PF00849 RNA pseudouridylate synthase KQ254_RS00625 PF10150 Ribonuclease E/G family KQ254_RS00625 PF12111 Polyribonucleotide phosphorylase C terminal KQ254_RS00625 PF00575 S1 RNA binding domain KQ254_RS00630 PF00501 AMP-binding enzyme KQ254_RS00630 PF13193 AMP-binding enzyme C-terminal domain KQ254_RS00645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ254_RS00645 PF03466 LysR substrate binding domain KQ254_RS00650 PF00106 short chain dehydrogenase KQ254_RS00655 PF04055 Radical SAM superfamily KQ254_RS00655 PF06969 HemN C-terminal domain KQ254_RS00665 PF01554 MatE KQ254_RS00670 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ254_RS00670 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KQ254_RS00670 PF02770 Acyl-CoA dehydrogenase, middle domain KQ254_RS00675 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KQ254_RS00675 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ254_RS00680 PF03109 ABC1 family KQ254_RS00685 PF01197 Ribosomal protein L31 KQ254_RS00700 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KQ254_RS00710 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KQ254_RS00710 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ254_RS00710 PF13247 4Fe-4S dicluster domain KQ254_RS00720 PF03884 DNA gyrase inhibitor YacG KQ254_RS00725 PF00753 Metallo-beta-lactamase superfamily KQ254_RS00730 PF00762 Ferrochelatase KQ254_RS00740 PF01177 Asp/Glu/Hydantoin racemase KQ254_RS00755 PF01206 Sulfurtransferase TusA KQ254_RS00760 PF03471 Transporter associated domain KQ254_RS00760 PF00571 CBS domain KQ254_RS00765 PF00795 Carbon-nitrogen hydrolase KQ254_RS00770 PF01588 Putative tRNA binding domain KQ254_RS00780 PF08334 Type II secretion system (T2SS), protein G KQ254_RS00780 PF07963 Prokaryotic N-terminal methylation motif KQ254_RS00785 PF00482 Type II secretion system (T2SS), protein F KQ254_RS00790 PF00270 DEAD/DEAH box helicase KQ254_RS00790 PF18319 PriA DNA helicase Cys-rich region (CRR) domain KQ254_RS00790 PF00271 Helicase conserved C-terminal domain KQ254_RS00790 PF17764 3′ DNA-binding domain (3′BD) KQ254_RS00790 PF18074 Primosomal protein N C-terminal domain KQ254_RS00795 PF00999 Sodium/hydrogen exchanger family KQ254_RS00795 PF02254 TrkA-N domain KQ254_RS00800 PF01430 Hsp33 protein KQ254_RS00810 PF00226 DnaJ domain KQ254_RS00810 PF01556 DnaJ C terminal domain KQ254_RS00820 PF01544 CorA-like Mg2+ transporter protein KQ254_RS00825 PF00575 S1 RNA binding domain KQ254_RS00825 PF00013 KH domain KQ254_RS00825 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain KQ254_RS00825 PF01138 3' exoribonuclease family, domain 1 KQ254_RS00825 PF03725 3' exoribonuclease family, domain 2 KQ254_RS00830 PF00312 Ribosomal protein S15 KQ254_RS00835 PF00144 Beta-lactamase KQ254_RS00840 PF13538 UvrD-like helicase C-terminal domain KQ254_RS00845 PF12705 PD-(D/E)XK nuclease superfamily KQ254_RS00845 PF00580 UvrD/REP helicase N-terminal domain KQ254_RS00845 PF13361 UvrD-like helicase C-terminal domain KQ254_RS00850 PF17946 RecC C-terminal domain KQ254_RS00860 PF03976 Polyphosphate kinase 2 (PPK2) KQ254_RS00870 PF01209 ubiE/COQ5 methyltransferase family KQ254_RS00880 PF03109 ABC1 family KQ254_RS00885 PF01494 FAD binding domain KQ254_RS00890 PF01502 Phosphoribosyl-AMP cyclohydrolase KQ254_RS00905 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter KQ254_RS00905 PF00361 Proton-conducting membrane transporter KQ254_RS00905 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KQ254_RS00905 PF13244 Domain of unknown function (DUF4040) KQ254_RS00910 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KQ254_RS00915 PF00361 Proton-conducting membrane transporter KQ254_RS00920 PF01899 Na+/H+ ion antiporter subunit KQ254_RS00925 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) KQ254_RS00930 PF03334 Na+/H+ antiporter subunit KQ254_RS00935 PF02033 Ribosome-binding factor A KQ254_RS00940 PF04760 Translation initiation factor IF-2, N-terminal region KQ254_RS00940 PF08364 Bacterial translation initiation factor IF-2 associated region KQ254_RS00940 PF11987 Translation-initiation factor 2 KQ254_RS00940 PF00009 Elongation factor Tu GTP binding domain KQ254_RS00945 PF00575 S1 RNA binding domain KQ254_RS00945 PF08529 NusA N-terminal domain KQ254_RS00945 PF13184 NusA-like KH domain KQ254_RS00950 PF17384 RimP C-terminal SH3 domain KQ254_RS00950 PF02576 RimP N-terminal domain KQ254_RS00970 PF03840 Preprotein translocase SecG subunit KQ254_RS00975 PF00121 Triosephosphate isomerase KQ254_RS00985 PF00482 Type II secretion system (T2SS), protein F KQ254_RS00995 PF01478 Type IV leader peptidase family KQ254_RS00995 PF06750 Bacterial Peptidase A24 N-terminal domain KQ254_RS01000 PF01121 Dephospho-CoA kinase KQ254_RS01010 PF08032 RNA 2'-O ribose methyltransferase substrate binding KQ254_RS01010 PF00588 SpoU rRNA Methylase family KQ254_RS01015 PF06865 Pyrimidine/purine nucleoside phosphorylase KQ254_RS01025 PF02463 RecF/RecN/SMC N terminal domain KQ254_RS01030 PF02622 Uncharacterized ACR, COG1678 KQ254_RS01035 PF03652 Holliday junction resolvase KQ254_RS01040 PF13533 Biotin-lipoyl like KQ254_RS01065 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KQ254_RS01065 PF12833 Helix-turn-helix domain KQ254_RS01065 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KQ254_RS01065 PF02805 Metal binding domain of Ada KQ254_RS01070 PF01066 CDP-alcohol phosphatidyltransferase KQ254_RS01080 PF02151 UvrB/uvrC motif KQ254_RS01080 PF01541 GIY-YIG catalytic domain KQ254_RS01080 PF08459 UvrC Helix-hairpin-helix N-terminal KQ254_RS01095 PF00378 Enoyl-CoA hydratase/isomerase KQ254_RS01095 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KQ254_RS01095 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KQ254_RS01100 PF00108 Thiolase, N-terminal domain KQ254_RS01100 PF02803 Thiolase, C-terminal domain KQ254_RS01115 PF09278 MerR, DNA binding KQ254_RS01115 PF00376 MerR family regulatory protein KQ254_RS01125 PF01323 DSBA-like thioredoxin domain KQ254_RS01140 PF00183 Hsp90 protein KQ254_RS01140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ254_RS01155 PF03553 Na+/H+ antiporter family KQ254_RS01155 PF13726 Na+-H+ antiporter family KQ254_RS01180 PF05000 RNA polymerase Rpb1, domain 4 KQ254_RS01180 PF00623 RNA polymerase Rpb1, domain 2 KQ254_RS01180 PF04998 RNA polymerase Rpb1, domain 5 KQ254_RS01180 PF04997 RNA polymerase Rpb1, domain 1 KQ254_RS01180 PF04983 RNA polymerase Rpb1, domain 3 KQ254_RS01185 PF04561 RNA polymerase Rpb2, domain 2 KQ254_RS01185 PF00562 RNA polymerase Rpb2, domain 6 KQ254_RS01185 PF04560 RNA polymerase Rpb2, domain 7 KQ254_RS01185 PF04563 RNA polymerase beta subunit KQ254_RS01185 PF10385 RNA polymerase beta subunit external 1 domain KQ254_RS01185 PF04565 RNA polymerase Rpb2, domain 3 KQ254_RS01190 PF00542 Ribosomal protein L7/L12 C-terminal domain KQ254_RS01190 PF16320 Ribosomal protein L7/L12 dimerisation domain KQ254_RS01195 PF00466 Ribosomal protein L10 KQ254_RS01200 PF00687 Ribosomal protein L1p/L10e family KQ254_RS01205 PF00298 Ribosomal protein L11, RNA binding domain KQ254_RS01205 PF03946 Ribosomal protein L11, N-terminal domain KQ254_RS01210 PF00467 KOW motif KQ254_RS01210 PF02357 Transcription termination factor nusG KQ254_RS01215 PF00584 SecE/Sec61-gamma subunits of protein translocation complex KQ254_RS01225 PF00009 Elongation factor Tu GTP binding domain KQ254_RS01225 PF03144 Elongation factor Tu domain 2 KQ254_RS01225 PF03143 Elongation factor Tu C-terminal domain KQ254_RS01250 PF04715 Anthranilate synthase component I, N terminal region KQ254_RS01250 PF00425 chorismate binding enzyme KQ254_RS01255 PF13419 Haloacid dehalogenase-like hydrolase KQ254_RS01260 PF12401 Protein of unknown function (DUF2662) KQ254_RS01260 PF00498 FHA domain KQ254_RS01265 PF00263 Bacterial type II and III secretion system protein KQ254_RS01265 PF03958 Bacterial type II/III secretion system short domain KQ254_RS01280 PF00816 H-NS histone family KQ254_RS01305 PF03900 Porphobilinogen deaminase, C-terminal domain KQ254_RS01305 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain KQ254_RS01310 PF00072 Response regulator receiver domain KQ254_RS01310 PF04397 LytTr DNA-binding domain KQ254_RS01315 PF06580 Histidine kinase KQ254_RS01315 PF07694 5TMR of 5TMR-LYT KQ254_RS01315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ254_RS01320 PF14698 Argininosuccinate lyase C-terminal KQ254_RS01320 PF00206 Lyase KQ254_RS01325 PF04362 Bacterial Fe(2+) trafficking KQ254_RS01330 PF01895 PhoU domain KQ254_RS01335 PF02321 Outer membrane efflux protein KQ254_RS01345 PF00892 EamA-like transporter family KQ254_RS01360 PF13667 ThiC-associated domain KQ254_RS01360 PF01964 Radical SAM ThiC family KQ254_RS01365 PF00293 NUDIX domain KQ254_RS01370 PF00149 Calcineurin-like phosphoesterase KQ254_RS01375 PF01258 Prokaryotic dksA/traR C4-type zinc finger KQ254_RS01380 PF00749 tRNA synthetases class I (E and Q), catalytic domain KQ254_RS01385 PF01098 Cell cycle protein KQ254_RS01390 PF02875 Mur ligase family, glutamate ligase domain KQ254_RS01390 PF08245 Mur ligase middle domain KQ254_RS01400 PF07670 Nucleoside recognition KQ254_RS01400 PF02421 Ferrous iron transport protein B KQ254_RS01400 PF07664 Ferrous iron transport protein B C terminus KQ254_RS01410 PF00589 Phage integrase family KQ254_RS01410 PF02899 Phage integrase, N-terminal SAM-like domain KQ254_RS01415 PF10411 Disulfide bond isomerase protein N-terminus KQ254_RS01415 PF13098 Thioredoxin-like domain KQ254_RS01420 PF00742 Homoserine dehydrogenase KQ254_RS01420 PF03447 Homoserine dehydrogenase, NAD binding domain KQ254_RS01420 PF01842 ACT domain KQ254_RS01425 PF00291 Pyridoxal-phosphate dependent enzyme KQ254_RS01430 PF00768 D-alanyl-D-alanine carboxypeptidase KQ254_RS01435 PF00072 Response regulator receiver domain KQ254_RS01435 PF00196 Bacterial regulatory proteins, luxR family KQ254_RS01440 PF00512 His Kinase A (phospho-acceptor) domain KQ254_RS01440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ254_RS01445 PF00158 Sigma-54 interaction domain KQ254_RS01445 PF02954 Bacterial regulatory protein, Fis family KQ254_RS01445 PF00072 Response regulator receiver domain KQ254_RS01450 PF03572 Peptidase family S41 KQ254_RS01450 PF00595 PDZ domain KQ254_RS01455 PF06415 BPG-independent PGAM N-terminus (iPGM_N) KQ254_RS01455 PF01676 Metalloenzyme superfamily KQ254_RS01460 PF03739 Lipopolysaccharide export system permease LptF/LptG KQ254_RS01470 PF00883 Cytosol aminopeptidase family, catalytic domain KQ254_RS01470 PF02789 Cytosol aminopeptidase family, N-terminal domain KQ254_RS01490 PF00677 Lumazine binding domain KQ254_RS01500 PF01872 RibD C-terminal domain KQ254_RS01500 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KQ254_RS01505 PF03477 ATP cone domain KQ254_RS01510 PF00909 Ammonium Transporter Family KQ254_RS01515 PF00543 Nitrogen regulatory protein P-II KQ254_RS01535 PF13737 Transposase DDE domain KQ254_RS01550 PF13411 MerR HTH family regulatory protein KQ254_RS01565 PF02421 Ferrous iron transport protein B KQ254_RS01565 PF07664 Ferrous iron transport protein B C terminus KQ254_RS01565 PF07670 Nucleoside recognition KQ254_RS01590 PF00596 Class II Aldolase and Adducin N-terminal domain KQ254_RS01595 PF00701 Dihydrodipicolinate synthetase family KQ254_RS01610 PF03573 outer membrane porin, OprD family KQ254_RS01615 PF00719 Inorganic pyrophosphatase KQ254_RS01630 PF00501 AMP-binding enzyme KQ254_RS01630 PF13193 AMP-binding enzyme C-terminal domain KQ254_RS01635 PF03989 DNA gyrase C-terminal domain, beta-propeller KQ254_RS01635 PF00521 DNA gyrase/topoisomerase IV, subunit A KQ254_RS01640 PF07690 Major Facilitator Superfamily KQ254_RS01645 PF03458 UPF0126 domain KQ254_RS01650 PF02810 SEC-C motif KQ254_RS01655 PF03741 Integral membrane protein TerC family KQ254_RS01655 PF03471 Transporter associated domain KQ254_RS01660 PF03641 Possible lysine decarboxylase KQ254_RS01665 PF07690 Major Facilitator Superfamily KQ254_RS01675 PF00817 impB/mucB/samB family KQ254_RS01675 PF11799 impB/mucB/samB family C-terminal domain KQ254_RS01675 PF11798 IMS family HHH motif KQ254_RS01695 PF11842 Domain of unknown function (DUF3362) KQ254_RS01695 PF04055 Radical SAM superfamily KQ254_RS01695 PF08497 Radical SAM N-terminal KQ254_RS01715 PF03358 NADPH-dependent FMN reductase KQ254_RS01725 PF00291 Pyridoxal-phosphate dependent enzyme KQ254_RS01785 PF01327 Polypeptide deformylase KQ254_RS01795 PF02481 DNA recombination-mediator protein A KQ254_RS01795 PF17782 DprA winged helix domain KQ254_RS01800 PF01300 Telomere recombination KQ254_RS01805 PF00892 EamA-like transporter family KQ254_RS01810 PF00440 Bacterial regulatory proteins, tetR family KQ254_RS01815 PF07690 Major Facilitator Superfamily KQ254_RS01825 PF00255 Glutathione peroxidase KQ254_RS01835 PF11008 Protein of unknown function (DUF2846) KQ254_RS01840 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain KQ254_RS01845 PF02874 ATP synthase alpha/beta family, beta-barrel domain KQ254_RS01845 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KQ254_RS01850 PF00231 ATP synthase KQ254_RS01855 PF02874 ATP synthase alpha/beta family, beta-barrel domain KQ254_RS01855 PF00306 ATP synthase alpha/beta chain, C terminal domain KQ254_RS01855 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KQ254_RS01860 PF00213 ATP synthase delta (OSCP) subunit KQ254_RS01865 PF00430 ATP synthase B/B' CF(0) KQ254_RS01870 PF00137 ATP synthase subunit C KQ254_RS01875 PF00119 ATP synthase A chain KQ254_RS01895 PF00005 ABC transporter KQ254_RS01900 PF00950 ABC 3 transport family KQ254_RS01905 PF01810 LysE type translocator KQ254_RS01910 PF04261 Dyp-type peroxidase family KQ254_RS01920 PF03949 Malic enzyme, NAD binding domain KQ254_RS01920 PF00390 Malic enzyme, N-terminal domain KQ254_RS01925 PF03485 Arginyl tRNA synthetase N terminal domain KQ254_RS01925 PF05746 DALR anticodon binding domain KQ254_RS01925 PF00750 tRNA synthetases class I (R) KQ254_RS01945 PF05726 Pirin C-terminal cupin domain KQ254_RS01945 PF02678 Pirin KQ254_RS01955 PF03551 Transcriptional regulator PadR-like family KQ254_RS01960 PF13427 Domain of unknown function (DUF4111) KQ254_RS01960 PF01909 Nucleotidyltransferase domain KQ254_RS01965 PF00117 Glutamine amidotransferase class-I KQ254_RS01965 PF00958 GMP synthase C terminal domain KQ254_RS01965 PF02540 NAD synthase KQ254_RS01970 PF04286 Protein of unknown function (DUF445) KQ254_RS01975 PF07681 DoxX KQ254_RS01980 PF09335 SNARE associated Golgi protein KQ254_RS01995 PF13614 AAA domain KQ254_RS02005 PF01722 BolA-like protein KQ254_RS02020 PF01648 4'-phosphopantetheinyl transferase superfamily KQ254_RS02025 PF16363 GDP-mannose 4,6 dehydratase KQ254_RS02040 PF00975 Thioesterase domain KQ254_RS02040 PF00501 AMP-binding enzyme KQ254_RS02040 PF00668 Condensation domain KQ254_RS02040 PF00550 Phosphopantetheine attachment site KQ254_RS02040 PF13193 AMP-binding enzyme C-terminal domain KQ254_RS02045 PF16197 Ketoacyl-synthetase C-terminal extension KQ254_RS02045 PF00109 Beta-ketoacyl synthase, N-terminal domain KQ254_RS02045 PF02801 Beta-ketoacyl synthase, C-terminal domain KQ254_RS02045 PF08242 Methyltransferase domain KQ254_RS02045 PF00550 Phosphopantetheine attachment site KQ254_RS02045 PF14765 Polyketide synthase dehydratase KQ254_RS02045 PF00975 Thioesterase domain KQ254_RS02050 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ254_RS02050 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ254_RS02050 PF02770 Acyl-CoA dehydrogenase, middle domain KQ254_RS02055 PF00501 AMP-binding enzyme KQ254_RS02060 PF00196 Bacterial regulatory proteins, luxR family KQ254_RS02060 PF03472 Autoinducer binding domain KQ254_RS02070 PF00765 Autoinducer synthase KQ254_RS02075 PF07690 Major Facilitator Superfamily KQ254_RS02075 PF00083 Sugar (and other) transporter KQ254_RS02080 PF00378 Enoyl-CoA hydratase/isomerase KQ254_RS02085 PF00378 Enoyl-CoA hydratase/isomerase KQ254_RS02090 PF02770 Acyl-CoA dehydrogenase, middle domain KQ254_RS02090 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ254_RS02090 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ254_RS02095 PF00501 AMP-binding enzyme KQ254_RS02095 PF13193 AMP-binding enzyme C-terminal domain KQ254_RS02100 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KQ254_RS02100 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KQ254_RS02105 PF00171 Aldehyde dehydrogenase family KQ254_RS02115 PF00324 Amino acid permease KQ254_RS02120 PF00324 Amino acid permease KQ254_RS02125 PF01042 Endoribonuclease L-PSP KQ254_RS02130 PF01168 Alanine racemase, N-terminal domain KQ254_RS02130 PF00842 Alanine racemase, C-terminal domain KQ254_RS02135 PF01266 FAD dependent oxidoreductase KQ254_RS02140 PF01037 Lrp/AsnC ligand binding domain KQ254_RS02150 PF07715 TonB-dependent Receptor Plug Domain KQ254_RS02150 PF00593 TonB dependent receptor KQ254_RS02165 PF00849 RNA pseudouridylate synthase KQ254_RS02180 PF02801 Beta-ketoacyl synthase, C-terminal domain KQ254_RS02180 PF00109 Beta-ketoacyl synthase, N-terminal domain KQ254_RS02210 PF00293 NUDIX domain KQ254_RS02230 PF00694 Aconitase C-terminal domain KQ254_RS02230 PF00330 Aconitase family (aconitate hydratase) KQ254_RS02235 PF00285 Citrate synthase, C-terminal domain KQ254_RS02245 PF00392 Bacterial regulatory proteins, gntR family KQ254_RS02245 PF07729 FCD domain KQ254_RS02255 PF00155 Aminotransferase class I and II KQ254_RS02260 PF09330 D-lactate dehydrogenase, membrane binding KQ254_RS02260 PF01565 FAD binding domain KQ254_RS02265 PF01070 FMN-dependent dehydrogenase KQ254_RS02270 PF07729 FCD domain KQ254_RS02270 PF00392 Bacterial regulatory proteins, gntR family KQ254_RS02275 PF02652 L-lactate permease KQ254_RS02280 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KQ254_RS02280 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KQ254_RS02280 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KQ254_RS02280 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KQ254_RS02285 PF16363 GDP-mannose 4,6 dehydratase KQ254_RS02290 PF00342 Phosphoglucose isomerase KQ254_RS02295 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KQ254_RS02295 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KQ254_RS02295 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KQ254_RS02300 PF00483 Nucleotidyl transferase KQ254_RS02305 PF02397 Bacterial sugar transferase KQ254_RS02310 PF00953 Glycosyl transferase family 4 KQ254_RS02315 PF01370 NAD dependent epimerase/dehydratase family KQ254_RS02320 PF13579 Glycosyl transferase 4-like domain KQ254_RS02325 PF02350 UDP-N-acetylglucosamine 2-epimerase KQ254_RS02330 PF01370 NAD dependent epimerase/dehydratase family KQ254_RS02335 PF08485 Polysaccharide biosynthesis protein C-terminal KQ254_RS02335 PF02719 Polysaccharide biosynthesis protein KQ254_RS02360 PF01370 NAD dependent epimerase/dehydratase family KQ254_RS02365 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KQ254_RS02365 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KQ254_RS02365 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KQ254_RS02370 PF18412 Outer-membrane lipoprotein Wza C-terminal domain KQ254_RS02370 PF10531 SLBB domain KQ254_RS02370 PF02563 Polysaccharide biosynthesis/export protein KQ254_RS02375 PF01451 Low molecular weight phosphotyrosine protein phosphatase KQ254_RS02380 PF13807 G-rich domain on putative tyrosine kinase KQ254_RS02380 PF13614 AAA domain KQ254_RS02380 PF02706 Chain length determinant protein KQ254_RS02385 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KQ254_RS02385 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KQ254_RS02390 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KQ254_RS02390 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KQ254_RS02395 PF03023 Lipid II flippase MurJ KQ254_RS02400 PF01510 N-acetylmuramoyl-L-alanine amidase KQ254_RS02405 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain KQ254_RS02405 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain KQ254_RS02415 PF05506 Domain of unknown function (DUF756) KQ254_RS02415 PF04185 Phosphoesterase family KQ254_RS02420 PF03725 3' exoribonuclease family, domain 2 KQ254_RS02420 PF01138 3' exoribonuclease family, domain 1 KQ254_RS02425 PF00487 Fatty acid desaturase KQ254_RS02430 PF00175 Oxidoreductase NAD-binding domain KQ254_RS02435 PF00440 Bacterial regulatory proteins, tetR family KQ254_RS02440 PF00440 Bacterial regulatory proteins, tetR family KQ254_RS02440 PF08360 QacR-like protein, C-terminal region KQ254_RS02445 PF01323 DSBA-like thioredoxin domain KQ254_RS02455 PF13419 Haloacid dehalogenase-like hydrolase KQ254_RS02460 PF00106 short chain dehydrogenase KQ254_RS02475 PF00696 Amino acid kinase family KQ254_RS02475 PF00583 Acetyltransferase (GNAT) family KQ254_RS02480 PF09084 NMT1/THI5 like KQ254_RS02485 PF09084 NMT1/THI5 like KQ254_RS02490 PF00296 Luciferase-like monooxygenase KQ254_RS02495 PF00528 Binding-protein-dependent transport system inner membrane component KQ254_RS02500 PF00005 ABC transporter KQ254_RS02505 PF00440 Bacterial regulatory proteins, tetR family KQ254_RS02505 PF08362 YcdC-like protein, C-terminal region KQ254_RS02510 PF01048 Phosphorylase superfamily KQ254_RS02520 PF01687 Riboflavin kinase KQ254_RS02520 PF06574 FAD synthetase KQ254_RS02525 PF08264 Anticodon-binding domain of tRNA KQ254_RS02525 PF00133 tRNA synthetases class I (I, L, M and V) KQ254_RS02525 PF06827 Zinc finger found in FPG and IleRS KQ254_RS02530 PF01252 Signal peptidase (SPase) II KQ254_RS02535 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KQ254_RS02575 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KQ254_RS02580 PF07859 alpha/beta hydrolase fold KQ254_RS02600 PF03466 LysR substrate binding domain KQ254_RS02600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ254_RS02605 PF01025 GrpE KQ254_RS02610 PF00012 Hsp70 protein KQ254_RS02630 PF13406 Transglycosylase SLT domain KQ254_RS02635 PF02222 ATP-grasp domain KQ254_RS02635 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain KQ254_RS02640 PF00731 AIR carboxylase KQ254_RS02650 PF08245 Mur ligase middle domain KQ254_RS02650 PF01225 Mur ligase family, catalytic domain KQ254_RS02650 PF02875 Mur ligase family, glutamate ligase domain KQ254_RS02660 PF00872 Transposase, Mutator family KQ254_RS02670 PF01569 PAP2 superfamily KQ254_RS02675 PF03741 Integral membrane protein TerC family KQ254_RS02685 PF03738 Glutathionylspermidine synthase preATP-grasp KQ254_RS02690 PF00355 Rieske [2Fe-2S] domain KQ254_RS02695 PF01979 Amidohydrolase family KQ254_RS02700 PF00156 Phosphoribosyl transferase domain KQ254_RS02710 PF13098 Thioredoxin-like domain KQ254_RS02710 PF10411 Disulfide bond isomerase protein N-terminus KQ254_RS02715 PF16916 Dimerisation domain of Zinc Transporter KQ254_RS02715 PF01545 Cation efflux family KQ254_RS02720 PF02583 Metal-sensitive transcriptional repressor KQ254_RS02725 PF01926 50S ribosome-binding GTPase KQ254_RS02725 PF12631 MnmE helical domain KQ254_RS02725 PF10396 GTP-binding protein TrmE N-terminus KQ254_RS02730 PF14849 YidC periplasmic domain KQ254_RS02730 PF02096 60Kd inner membrane protein KQ254_RS02735 PF01809 Putative membrane protein insertion efficiency factor KQ254_RS02740 PF00825 Ribonuclease P KQ254_RS02745 PF00468 Ribosomal protein L34 KQ254_RS02750 PF08299 Bacterial dnaA protein helix-turn-helix KQ254_RS02750 PF11638 DnaA N-terminal domain KQ254_RS02750 PF00308 Bacterial dnaA protein KQ254_RS02755 PF02767 DNA polymerase III beta subunit, central domain KQ254_RS02755 PF02768 DNA polymerase III beta subunit, C-terminal domain KQ254_RS02755 PF00712 DNA polymerase III beta subunit, N-terminal domain KQ254_RS02760 PF02463 RecF/RecN/SMC N terminal domain KQ254_RS02765 PF00986 DNA gyrase B subunit, carboxyl terminus KQ254_RS02765 PF18053 DNA gyrase B subunit insert domain KQ254_RS02765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ254_RS02765 PF01751 Toprim domain KQ254_RS02765 PF00204 DNA gyrase B KQ254_RS02785 PF09335 SNARE associated Golgi protein KQ254_RS02790 PF00005 ABC transporter KQ254_RS02790 PF12848 ABC transporter KQ254_RS02810 PF01521 Iron-sulphur cluster biosynthesis KQ254_RS02815 PF00561 alpha/beta hydrolase fold KQ254_RS02820 PF03702 Anhydro-N-acetylmuramic acid kinase KQ254_RS02825 PF00579 tRNA synthetases class I (W and Y) KQ254_RS02865 PF00209 Sodium:neurotransmitter symporter family KQ254_RS02875 PF01029 NusB family KQ254_RS02875 PF01189 16S rRNA methyltransferase RsmB/F KQ254_RS02880 PF02911 Formyl transferase, C-terminal domain KQ254_RS02880 PF00551 Formyl transferase KQ254_RS02885 PF00920 Dehydratase family KQ254_RS02900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ254_RS02900 PF03466 LysR substrate binding domain KQ254_RS02905 PF00860 Permease family KQ254_RS02910 PF00311 Phosphoenolpyruvate carboxylase KQ254_RS02920 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KQ254_RS02925 PF00873 AcrB/AcrD/AcrF family KQ254_RS02935 PF00226 DnaJ domain KQ254_RS02935 PF01556 DnaJ C terminal domain KQ254_RS02935 PF00684 DnaJ central domain KQ254_RS02945 PF05173 Dihydrodipicolinate reductase, C-terminus KQ254_RS02945 PF01113 Dihydrodipicolinate reductase, N-terminus KQ254_RS02955 PF07690 Major Facilitator Superfamily KQ254_RS02960 PF00248 Aldo/keto reductase family KQ254_RS02965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ254_RS02965 PF03466 LysR substrate binding domain KQ254_RS02980 PF00392 Bacterial regulatory proteins, gntR family KQ254_RS02980 PF00155 Aminotransferase class I and II KQ254_RS02985 PF00107 Zinc-binding dehydrogenase KQ254_RS02985 PF08240 Alcohol dehydrogenase GroES-like domain KQ254_RS02990 PF03352 Methyladenine glycosylase KQ254_RS03005 PF14815 NUDIX domain KQ254_RS03005 PF00633 Helix-hairpin-helix motif KQ254_RS03005 PF10576 Iron-sulfur binding domain of endonuclease III KQ254_RS03005 PF00730 HhH-GPD superfamily base excision DNA repair protein KQ254_RS03020 PF07043 Protein of unknown function (DUF1328) KQ254_RS03025 PF03692 Putative zinc- or iron-chelating domain KQ254_RS03030 PF07995 Glucose / Sorbosone dehydrogenase KQ254_RS03035 PF16193 AAA C-terminal domain KQ254_RS03035 PF12002 MgsA AAA+ ATPase C terminal KQ254_RS03035 PF00004 ATPase family associated with various cellular activities (AAA) KQ254_RS03040 PF01226 Formate/nitrite transporter KQ254_RS03050 PF01259 SAICAR synthetase KQ254_RS03060 PF00701 Dihydrodipicolinate synthetase family KQ254_RS03065 PF00857 Isochorismatase family KQ254_RS03070 PF01758 Sodium Bile acid symporter family KQ254_RS03075 PF01554 MatE KQ254_RS03080 PF04463 Protein of unknown function (DUF523) KQ254_RS03085 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KQ254_RS03095 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KQ254_RS03100 PF14497 Glutathione S-transferase, C-terminal domain KQ254_RS03100 PF02798 Glutathione S-transferase, N-terminal domain KQ254_RS03110 PF00324 Amino acid permease KQ254_RS03120 PF07683 Cobalamin synthesis protein cobW C-terminal domain KQ254_RS03120 PF02492 CobW/HypB/UreG, nucleotide-binding domain KQ254_RS03130 PF00392 Bacterial regulatory proteins, gntR family KQ254_RS03130 PF07702 UTRA domain KQ254_RS03135 PF05962 HutD KQ254_RS03140 PF01175 Urocanase Rossmann-like domain KQ254_RS03140 PF17392 Urocanase C-terminal domain KQ254_RS03140 PF17391 Urocanase N-terminal domain KQ254_RS03145 PF00221 Aromatic amino acid lyase KQ254_RS03150 PF00324 Amino acid permease KQ254_RS03155 PF01979 Amidohydrolase family KQ254_RS03160 PF00491 Arginase family KQ254_RS03175 PF01177 Asp/Glu/Hydantoin racemase KQ254_RS03190 PF00583 Acetyltransferase (GNAT) family KQ254_RS03195 PF10706 Aminoglycoside-2''-adenylyltransferase KQ254_RS03200 PF00132 Bacterial transferase hexapeptide (six repeats) KQ254_RS03205 PF00186 Dihydrofolate reductase KQ254_RS03210 PF00583 Acetyltransferase (GNAT) family KQ254_RS03240 PF18623 TnsE C-terminal domain KQ254_RS03245 PF06527 TniQ KQ254_RS03245 PF15978 Tn7-like transposition protein D KQ254_RS03250 PF13401 AAA domain KQ254_RS03250 PF11426 Tn7 transposition regulator TnsC KQ254_RS03255 PF00665 Integrase core domain KQ254_RS03260 PF08721 TnsA endonuclease C terminal KQ254_RS03260 PF08722 TnsA endonuclease N terminal KQ254_RS03265 PF01380 SIS domain KQ254_RS03270 PF00132 Bacterial transferase hexapeptide (six repeats) KQ254_RS03270 PF14602 Hexapeptide repeat of succinyl-transferase KQ254_RS03270 PF12804 MobA-like NTP transferase domain KQ254_RS03275 PF04608 Phosphatidylglycerophosphatase A KQ254_RS03280 PF00586 AIR synthase related protein, N-terminal domain KQ254_RS03280 PF02769 AIR synthase related protein, C-terminal domain KQ254_RS03285 PF01029 NusB family KQ254_RS03290 PF00885 6,7-dimethyl-8-ribityllumazine synthase KQ254_RS03295 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KQ254_RS03295 PF00925 GTP cyclohydrolase II KQ254_RS03320 PF02580 D-Tyr-tRNA(Tyr) deacylase KQ254_RS03325 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KQ254_RS03325 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain KQ254_RS03330 PF00581 Rhodanese-like domain KQ254_RS03335 PF02666 Phosphatidylserine decarboxylase KQ254_RS03345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ254_RS03345 PF00512 His Kinase A (phospho-acceptor) domain KQ254_RS03345 PF00989 PAS fold KQ254_RS03345 PF11808 Phosphate regulon sensor protein PhoR KQ254_RS03350 PF00072 Response regulator receiver domain KQ254_RS03350 PF00486 Transcriptional regulatory protein, C terminal KQ254_RS03360 PF00106 short chain dehydrogenase KQ254_RS03365 PF01554 MatE KQ254_RS03370 PF00155 Aminotransferase class I and II KQ254_RS03375 PF04286 Protein of unknown function (DUF445) KQ254_RS03390 PF04262 Glutamate-cysteine ligase KQ254_RS03395 PF02600 Disulfide bond formation protein DsbB KQ254_RS03400 PF04717 Type VI secretion system, phage-baseplate injector KQ254_RS03400 PF13296 Putative type VI secretion system Rhs element Vgr KQ254_RS03400 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) KQ254_RS03425 PF05728 Uncharacterised protein family (UPF0227) KQ254_RS03430 PF00204 DNA gyrase B KQ254_RS03430 PF00986 DNA gyrase B subunit, carboxyl terminus KQ254_RS03430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ254_RS03430 PF01751 Toprim domain KQ254_RS03435 PF00106 short chain dehydrogenase KQ254_RS03440 PF04115 Ureidoglycolate lyase KQ254_RS03445 PF03561 Allantoicase repeat KQ254_RS03450 PF01494 FAD binding domain KQ254_RS03460 PF00860 Permease family KQ254_RS03465 PF00576 HIUase/Transthyretin family KQ254_RS03495 PF02683 Cytochrome C biogenesis protein transmembrane region KQ254_RS03495 PF11412 Disulphide bond corrector protein DsbC KQ254_RS03500 PF07694 5TMR of 5TMR-LYT KQ254_RS03500 PF00990 Diguanylate cyclase, GGDEF domain KQ254_RS03505 PF07859 alpha/beta hydrolase fold KQ254_RS03515 PF03960 ArsC family KQ254_RS03520 PF03372 Endonuclease/Exonuclease/phosphatase family KQ254_RS03525 PF00156 Phosphoribosyl transferase domain KQ254_RS03530 PF07715 TonB-dependent Receptor Plug Domain KQ254_RS03530 PF00593 TonB dependent receptor KQ254_RS03540 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain KQ254_RS03540 PF02951 Prokaryotic glutathione synthetase, N-terminal domain KQ254_RS03545 PF04101 Glycosyltransferase family 28 C-terminal domain KQ254_RS03545 PF03033 Glycosyltransferase family 28 N-terminal domain KQ254_RS03550 PF01225 Mur ligase family, catalytic domain KQ254_RS03550 PF08245 Mur ligase middle domain KQ254_RS03550 PF02875 Mur ligase family, glutamate ligase domain KQ254_RS03555 PF07478 D-ala D-ala ligase C-terminus KQ254_RS03555 PF01820 D-ala D-ala ligase N-terminus KQ254_RS03560 PF03799 Cell division protein FtsQ KQ254_RS03560 PF08478 POTRA domain, FtsQ-type KQ254_RS03565 PF02491 SHS2 domain inserted in FTSA KQ254_RS03570 PF12327 FtsZ family, C-terminal domain KQ254_RS03570 PF00091 Tubulin/FtsZ family, GTPase domain KQ254_RS03575 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase KQ254_RS03585 PF01551 Peptidase family M23 KQ254_RS03590 PF17831 Pyruvate dehydrogenase E1 component middle domain KQ254_RS03590 PF00456 Transketolase, thiamine diphosphate binding domain KQ254_RS03595 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KQ254_RS03595 PF00364 Biotin-requiring enzyme KQ254_RS03595 PF02817 e3 binding domain KQ254_RS03605 PF01169 Uncharacterized protein family UPF0016 KQ254_RS03610 PF07715 TonB-dependent Receptor Plug Domain KQ254_RS03610 PF00593 TonB dependent receptor KQ254_RS03615 PF01613 Flavin reductase like domain KQ254_RS03615 PF00258 Flavodoxin KQ254_RS03620 PF03692 Putative zinc- or iron-chelating domain KQ254_RS03625 PF00478 IMP dehydrogenase / GMP reductase domain KQ254_RS03625 PF00571 CBS domain KQ254_RS03630 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KQ254_RS03630 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KQ254_RS03630 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KQ254_RS03630 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KQ254_RS03635 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region KQ254_RS03635 PF01243 Pyridoxamine 5'-phosphate oxidase KQ254_RS03640 PF01368 DHH family KQ254_RS03640 PF02272 DHHA1 domain KQ254_RS03640 PF17768 RecJ OB domain KQ254_RS03660 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KQ254_RS03665 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) KQ254_RS03670 PF04452 RNA methyltransferase KQ254_RS03675 PF00924 Mechanosensitive ion channel KQ254_RS03685 PF16177 Acetyl-coenzyme A synthetase N-terminus KQ254_RS03685 PF00501 AMP-binding enzyme KQ254_RS03685 PF13193 AMP-binding enzyme C-terminal domain KQ254_RS03690 PF00857 Isochorismatase family KQ254_RS03695 PF01037 Lrp/AsnC ligand binding domain KQ254_RS03700 PF00296 Luciferase-like monooxygenase KQ254_RS03705 PF03358 NADPH-dependent FMN reductase KQ254_RS03710 PF00196 Bacterial regulatory proteins, luxR family KQ254_RS03710 PF00072 Response regulator receiver domain KQ254_RS03720 PF01627 Hpt domain KQ254_RS03720 PF00072 Response regulator receiver domain KQ254_RS03720 PF00512 His Kinase A (phospho-acceptor) domain KQ254_RS03720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ254_RS03720 PF00672 HAMP domain KQ254_RS03725 PF04341 Protein of unknown function, DUF485 KQ254_RS03730 PF00474 Sodium:solute symporter family KQ254_RS03740 PF02028 BCCT, betaine/carnitine/choline family transporter KQ254_RS03750 PF00990 Diguanylate cyclase, GGDEF domain KQ254_RS03755 PF17755 UvrA DNA-binding domain KQ254_RS03755 PF17760 UvrA interaction domain KQ254_RS03760 PF00440 Bacterial regulatory proteins, tetR family KQ254_RS03760 PF16925 Tetracyclin repressor-like, C-terminal domain KQ254_RS03765 PF08240 Alcohol dehydrogenase GroES-like domain KQ254_RS03765 PF00107 Zinc-binding dehydrogenase KQ254_RS03775 PF06942 GlpM protein KQ254_RS03780 PF02581 Thiamine monophosphate synthase KQ254_RS03780 PF08543 Phosphomethylpyrimidine kinase KQ254_RS03780 PF03070 TENA/THI-4/PQQC family KQ254_RS03790 PF07690 Major Facilitator Superfamily KQ254_RS03795 PF00436 Single-strand binding protein family KQ254_RS03805 PF03591 AzlC protein KQ254_RS03815 PF00324 Amino acid permease KQ254_RS03820 PF00155 Aminotransferase class I and II KQ254_RS03820 PF00392 Bacterial regulatory proteins, gntR family KQ254_RS03825 PF00202 Aminotransferase class-III KQ254_RS03830 PF00171 Aldehyde dehydrogenase family KQ254_RS03835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ254_RS03840 PF00857 Isochorismatase family KQ254_RS03845 PF05726 Pirin C-terminal cupin domain KQ254_RS03845 PF02678 Pirin KQ254_RS03850 PF01593 Flavin containing amine oxidoreductase KQ254_RS03870 PF07690 Major Facilitator Superfamily KQ254_RS03875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ254_RS03875 PF03466 LysR substrate binding domain KQ254_RS03895 PF00248 Aldo/keto reductase family KQ254_RS03900 PF02311 AraC-like ligand binding domain KQ254_RS03900 PF12833 Helix-turn-helix domain KQ254_RS03935 PF01638 HxlR-like helix-turn-helix KQ254_RS03940 PF02525 Flavodoxin-like fold KQ254_RS03965 PF02705 K+ potassium transporter KQ254_RS03990 PF00230 Major intrinsic protein KQ254_RS04005 PF00977 Histidine biosynthesis protein KQ254_RS04010 PF01636 Phosphotransferase enzyme family KQ254_RS04025 PF03992 Antibiotic biosynthesis monooxygenase KQ254_RS04040 PF00664 ABC transporter transmembrane region KQ254_RS04040 PF00005 ABC transporter KQ254_RS04045 PF00977 Histidine biosynthesis protein KQ254_RS04060 PF00117 Glutamine amidotransferase class-I KQ254_RS04065 PF00475 Imidazoleglycerol-phosphate dehydratase KQ254_RS04085 PF00583 Acetyltransferase (GNAT) family KQ254_RS04090 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain KQ254_RS04090 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain KQ254_RS04100 PF00672 HAMP domain KQ254_RS04100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ254_RS04100 PF00512 His Kinase A (phospho-acceptor) domain KQ254_RS04105 PF00486 Transcriptional regulatory protein, C terminal KQ254_RS04105 PF00072 Response regulator receiver domain KQ254_RS04110 PF17674 HHH domain KQ254_RS04110 PF00575 S1 RNA binding domain KQ254_RS04110 PF09371 Tex-like protein N-terminal domain KQ254_RS04110 PF16921 Tex protein YqgF-like domain KQ254_RS04115 PF01740 STAS domain KQ254_RS04115 PF00916 Sulfate permease family KQ254_RS04120 PF00106 short chain dehydrogenase KQ254_RS04125 PF01053 Cys/Met metabolism PLP-dependent enzyme KQ254_RS04130 PF00005 ABC transporter KQ254_RS04130 PF12848 ABC transporter KQ254_RS04155 PF00529 HlyD membrane-fusion protein of T1SS KQ254_RS04155 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KQ254_RS04160 PF00873 AcrB/AcrD/AcrF family KQ254_RS04165 PF01545 Cation efflux family KQ254_RS04195 PF00324 Amino acid permease KQ254_RS04210 PF00749 tRNA synthetases class I (E and Q), catalytic domain KQ254_RS04225 PF01795 MraW methylase family KQ254_RS04235 PF00905 Penicillin binding protein transpeptidase domain KQ254_RS04235 PF03717 Penicillin-binding Protein dimerisation domain KQ254_RS04240 PF01225 Mur ligase family, catalytic domain KQ254_RS04240 PF02875 Mur ligase family, glutamate ligase domain KQ254_RS04240 PF08245 Mur ligase middle domain KQ254_RS04245 PF01225 Mur ligase family, catalytic domain KQ254_RS04245 PF02875 Mur ligase family, glutamate ligase domain KQ254_RS04245 PF08245 Mur ligase middle domain KQ254_RS04250 PF00953 Glycosyl transferase family 4 KQ254_RS04260 PF13847 Methyltransferase domain KQ254_RS04265 PF00905 Penicillin binding protein transpeptidase domain KQ254_RS04265 PF17092 Penicillin-binding protein OB-like domain KQ254_RS04265 PF00912 Transglycosylase KQ254_RS04270 PF11104 Type IV pilus assembly protein PilM; KQ254_RS04275 PF05137 Fimbrial assembly protein (PilN) KQ254_RS04280 PF04350 Pilus assembly protein, PilO KQ254_RS04290 PF03958 Bacterial type II/III secretion system short domain KQ254_RS04290 PF00263 Bacterial type II and III secretion system protein KQ254_RS04290 PF07660 Secretin and TonB N terminus short domain KQ254_RS04290 PF11741 AMIN domain KQ254_RS04295 PF01202 Shikimate kinase KQ254_RS04300 PF01761 3-dehydroquinate synthase KQ254_RS04310 PF00310 Glutamine amidotransferases class-II KQ254_RS04310 PF04898 Glutamate synthase central domain KQ254_RS04310 PF01645 Conserved region in glutamate synthase KQ254_RS04310 PF01493 GXGXG motif KQ254_RS04315 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KQ254_RS04315 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ254_RS04325 PF04011 LemA family KQ254_RS04330 PF04536 TPM domain KQ254_RS04340 PF07963 Prokaryotic N-terminal methylation motif KQ254_RS04340 PF00114 Pilin (bacterial filament) KQ254_RS04350 PF15864 Protein glycosylation ligase KQ254_RS04350 PF04932 O-Antigen ligase KQ254_RS04350 PF11846 Virulence factor membrane-bound polymerase, C-terminal KQ254_RS04355 PF00210 Ferritin-like domain KQ254_RS04360 PF04324 BFD-like [2Fe-2S] binding domain KQ254_RS04365 PF01042 Endoribonuclease L-PSP KQ254_RS04370 PF13291 ACT domain KQ254_RS04370 PF04607 Region found in RelA / SpoT proteins KQ254_RS04370 PF02824 TGS domain KQ254_RS04380 PF01192 RNA polymerase Rpb6 KQ254_RS04385 PF00625 Guanylate kinase KQ254_RS04390 PF02401 LytB protein KQ254_RS04400 PF07963 Prokaryotic N-terminal methylation motif KQ254_RS04400 PF00114 Pilin (bacterial filament) KQ254_RS04435 PF00886 Ribosomal protein S16 KQ254_RS04440 PF01782 RimM N-terminal domain KQ254_RS04440 PF05239 PRC-barrel domain KQ254_RS04445 PF01746 tRNA (Guanine-1)-methyltransferase KQ254_RS04450 PF01245 Ribosomal protein L19 KQ254_RS04455 PF00561 alpha/beta hydrolase fold KQ254_RS04460 PF03280 Proteobacterial lipase chaperone protein KQ254_RS04465 PF09157 Pseudouridine synthase II TruB, C-terminal KQ254_RS04465 PF01509 TruB family pseudouridylate synthase (N terminal domain) KQ254_RS04465 PF16198 tRNA pseudouridylate synthase B C-terminal domain KQ254_RS04470 PF01925 Sulfite exporter TauE/SafE KQ254_RS04480 PF00892 EamA-like transporter family KQ254_RS04485 PF00892 EamA-like transporter family KQ254_RS04490 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KQ254_RS04490 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KQ254_RS04495 PF01565 FAD binding domain KQ254_RS04495 PF02913 FAD linked oxidases, C-terminal domain KQ254_RS04505 PF03992 Antibiotic biosynthesis monooxygenase KQ254_RS04510 PF02525 Flavodoxin-like fold KQ254_RS04520 PF07690 Major Facilitator Superfamily KQ254_RS04525 PF12805 FUSC-like inner membrane protein yccS KQ254_RS04530 PF00080 Copper/zinc superoxide dismutase (SODC) KQ254_RS04535 PF01594 AI-2E family transporter KQ254_RS04560 PF00149 Calcineurin-like phosphoesterase KQ254_RS04570 PF13936 Helix-turn-helix domain KQ254_RS04570 PF00665 Integrase core domain KQ254_RS04595 PF01734 Patatin-like phospholipase KQ254_RS04620 PF13614 AAA domain KQ254_RS04640 PF01209 ubiE/COQ5 methyltransferase family KQ254_RS04650 PF00324 Amino acid permease KQ254_RS04655 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KQ254_RS04655 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KQ254_RS04660 PF00202 Aminotransferase class-III KQ254_RS04665 PF04958 Arginine N-succinyltransferase beta subunit KQ254_RS04670 PF00171 Aldehyde dehydrogenase family KQ254_RS04675 PF04996 Succinylarginine dihydrolase KQ254_RS04680 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family KQ254_RS04695 PF00082 Subtilase family KQ254_RS04695 PF05922 Peptidase inhibitor I9 KQ254_RS04710 PF03466 LysR substrate binding domain KQ254_RS04710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ254_RS04715 PF00892 EamA-like transporter family KQ254_RS04730 PF02092 Glycyl-tRNA synthetase beta subunit KQ254_RS04730 PF05746 DALR anticodon binding domain KQ254_RS04735 PF02091 Glycyl-tRNA synthetase alpha subunit KQ254_RS04760 PF00571 CBS domain KQ254_RS04765 PF04024 PspC domain KQ254_RS04775 PF12806 Acetyl-CoA dehydrogenase C-terminal like KQ254_RS04775 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ254_RS04775 PF02770 Acyl-CoA dehydrogenase, middle domain KQ254_RS04775 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ254_RS04785 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KQ254_RS04785 PF01488 Shikimate / quinate 5-dehydrogenase KQ254_RS04785 PF08501 Shikimate dehydrogenase substrate binding domain KQ254_RS04790 PF01218 Coproporphyrinogen III oxidase KQ254_RS04795 PF00925 GTP cyclohydrolase II KQ254_RS04800 PF02780 Transketolase, C-terminal domain KQ254_RS04800 PF13292 1-deoxy-D-xylulose-5-phosphate synthase KQ254_RS04800 PF02779 Transketolase, pyrimidine binding domain KQ254_RS04805 PF00459 Inositol monophosphatase family KQ254_RS04810 PF00271 Helicase conserved C-terminal domain KQ254_RS04810 PF00270 DEAD/DEAH box helicase KQ254_RS04810 PF12343 Cold shock protein DEAD box A KQ254_RS04810 PF03880 DbpA RNA binding domain KQ254_RS04820 PF00005 ABC transporter KQ254_RS04825 PF02405 Permease MlaE KQ254_RS04835 PF05494 MlaC protein KQ254_RS04845 PF01544 CorA-like Mg2+ transporter protein KQ254_RS04850 PF03641 Possible lysine decarboxylase KQ254_RS04855 PF00293 NUDIX domain KQ254_RS04860 PF00156 Phosphoribosyl transferase domain KQ254_RS04865 PF17191 RecG wedge domain KQ254_RS04865 PF00271 Helicase conserved C-terminal domain KQ254_RS04865 PF00270 DEAD/DEAH box helicase KQ254_RS04880 PF01553 Acyltransferase KQ254_RS04890 PF00375 Sodium:dicarboxylate symporter family KQ254_RS04900 PF01926 50S ribosome-binding GTPase KQ254_RS04905 PF02082 Transcriptional regulator KQ254_RS04910 PF00970 Oxidoreductase FAD-binding domain KQ254_RS04910 PF00042 Globin KQ254_RS04910 PF00175 Oxidoreductase NAD-binding domain KQ254_RS04920 PF05872 Bacterial protein of unknown function (DUF853) KQ254_RS04925 PF01053 Cys/Met metabolism PLP-dependent enzyme KQ254_RS04930 PF00117 Glutamine amidotransferase class-I KQ254_RS04935 PF00338 Ribosomal protein S10p/S20e KQ254_RS04940 PF00297 Ribosomal protein L3 KQ254_RS04945 PF00573 Ribosomal protein L4/L1 family KQ254_RS04950 PF00276 Ribosomal protein L23 KQ254_RS04955 PF03947 Ribosomal Proteins L2, C-terminal domain KQ254_RS04955 PF00181 Ribosomal Proteins L2, RNA binding domain KQ254_RS04960 PF00203 Ribosomal protein S19 KQ254_RS04965 PF00237 Ribosomal protein L22p/L17e KQ254_RS04975 PF00252 Ribosomal protein L16p/L10e KQ254_RS04980 PF00831 Ribosomal L29 protein KQ254_RS04985 PF00366 Ribosomal protein S17 KQ254_RS04990 PF00238 Ribosomal protein L14p/L23e KQ254_RS04995 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 KQ254_RS04995 PF00467 KOW motif KQ254_RS05000 PF00281 Ribosomal protein L5 KQ254_RS05000 PF00673 ribosomal L5P family C-terminus KQ254_RS05005 PF00253 Ribosomal protein S14p/S29e KQ254_RS05010 PF00410 Ribosomal protein S8 KQ254_RS05015 PF00347 Ribosomal protein L6 KQ254_RS05020 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast KQ254_RS05025 PF00333 Ribosomal protein S5, N-terminal domain KQ254_RS05025 PF03719 Ribosomal protein S5, C-terminal domain KQ254_RS05030 PF00327 Ribosomal protein L30p/L7e KQ254_RS05035 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A KQ254_RS05040 PF00344 SecY translocase KQ254_RS05045 PF00444 Ribosomal protein L36 KQ254_RS05050 PF00416 Ribosomal protein S13/S18 KQ254_RS05055 PF00411 Ribosomal protein S11 KQ254_RS05060 PF00163 Ribosomal protein S4/S9 N-terminal domain KQ254_RS05060 PF01479 S4 domain KQ254_RS05065 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain KQ254_RS05065 PF01000 RNA polymerase Rpb3/RpoA insert domain KQ254_RS05065 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain KQ254_RS05070 PF01196 Ribosomal protein L17 KQ254_RS05075 PF00743 Flavin-binding monooxygenase-like KQ254_RS05080 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ254_RS05080 PF02770 Acyl-CoA dehydrogenase, middle domain KQ254_RS05080 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ254_RS05085 PF03937 Flavinator of succinate dehydrogenase KQ254_RS05115 PF09526 Probable metal-binding protein (DUF2387) KQ254_RS05125 PF13610 DDE domain KQ254_RS05135 PF00575 S1 RNA binding domain KQ254_RS05135 PF00773 RNB domain KQ254_RS05135 PF08206 Ribonuclease B OB domain KQ254_RS05135 PF08461 Ribonuclease R winged-helix domain KQ254_RS05135 PF17876 Cold shock domain KQ254_RS05180 PF01557 Fumarylacetoacetate (FAA) hydrolase family KQ254_RS05185 PF12833 Helix-turn-helix domain KQ254_RS05195 PF03631 Virulence factor BrkB KQ254_RS05200 PF03358 NADPH-dependent FMN reductase KQ254_RS05225 PF02130 Uncharacterized protein family UPF0054 KQ254_RS05230 PF02562 PhoH-like protein KQ254_RS05235 PF01938 TRAM domain KQ254_RS05235 PF04055 Radical SAM superfamily KQ254_RS05235 PF00919 Uncharacterized protein family UPF0004 KQ254_RS05240 PF01551 Peptidase family M23 KQ254_RS05240 PF01464 Transglycosylase SLT domain KQ254_RS05240 PF10145 Phage-related minor tail protein KQ254_RS05250 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KQ254_RS05250 PF00056 lactate/malate dehydrogenase, NAD binding domain KQ254_RS05270 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ KQ254_RS05275 PF01066 CDP-alcohol phosphatidyltransferase KQ254_RS05320 PF02770 Acyl-CoA dehydrogenase, middle domain KQ254_RS05320 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ254_RS05320 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ254_RS05325 PF17932 Tetracyclin repressor-like, C-terminal domain KQ254_RS05325 PF00440 Bacterial regulatory proteins, tetR family KQ254_RS05340 PF01039 Carboxyl transferase domain KQ254_RS05345 PF02770 Acyl-CoA dehydrogenase, middle domain KQ254_RS05345 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ254_RS05345 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ254_RS05355 PF02785 Biotin carboxylase C-terminal domain KQ254_RS05355 PF00289 Biotin carboxylase, N-terminal domain KQ254_RS05355 PF00364 Biotin-requiring enzyme KQ254_RS05355 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KQ254_RS05365 PF04386 Stringent starvation protein B KQ254_RS05370 PF13417 Glutathione S-transferase, N-terminal domain KQ254_RS05370 PF00043 Glutathione S-transferase, C-terminal domain KQ254_RS05375 PF00380 Ribosomal protein S9/S16 KQ254_RS05380 PF00572 Ribosomal protein L13 KQ254_RS05385 PF04166 Pyridoxal phosphate biosynthetic protein PdxA KQ254_RS05390 PF00398 Ribosomal RNA adenine dimethylase KQ254_RS05395 PF00149 Calcineurin-like phosphoesterase KQ254_RS05415 PF16360 GTP-binding GTPase Middle Region KQ254_RS05415 PF13167 GTP-binding GTPase N-terminal KQ254_RS05415 PF01926 50S ribosome-binding GTPase KQ254_RS05425 PF13091 PLD-like domain KQ254_RS05430 PF10518 TAT (twin-arginine translocation) pathway signal sequence KQ254_RS05430 PF00149 Calcineurin-like phosphoesterase KQ254_RS05435 PF00691 OmpA family KQ254_RS05435 PF01389 OmpA-like transmembrane domain KQ254_RS05440 PF00990 Diguanylate cyclase, GGDEF domain KQ254_RS05440 PF17152 Periplasmic sensor domain KQ254_RS05475 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KQ254_RS05475 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ254_RS05485 PF04273 Putative phosphatase (DUF442) KQ254_RS05485 PF00753 Metallo-beta-lactamase superfamily KQ254_RS05490 PF00561 alpha/beta hydrolase fold KQ254_RS05495 PF00085 Thioredoxin KQ254_RS05500 PF03061 Thioesterase superfamily KQ254_RS05510 PF04461 Protein of unknown function (DUF520) KQ254_RS05520 PF01266 FAD dependent oxidoreductase KQ254_RS05520 PF05430 S-adenosyl-L-methionine-dependent methyltransferase KQ254_RS05530 PF03795 YCII-related domain KQ254_RS05535 PF04279 Intracellular septation protein A KQ254_RS05540 PF02811 PHP domain KQ254_RS05545 PF01062 Bestrophin, RFP-TM, chloride channel KQ254_RS05550 PF04002 RadC-like JAB domain KQ254_RS05555 PF04127 DNA / pantothenate metabolism flavoprotein KQ254_RS05555 PF02441 Flavoprotein KQ254_RS05560 PF07549 SecD/SecF GG Motif KQ254_RS05560 PF02355 Protein export membrane protein KQ254_RS05565 PF07549 SecD/SecF GG Motif KQ254_RS05565 PF13721 SecD export protein N-terminal TM region KQ254_RS05565 PF02355 Protein export membrane protein KQ254_RS05570 PF02699 Preprotein translocase subunit KQ254_RS05575 PF01702 Queuine tRNA-ribosyltransferase KQ254_RS05590 PF02547 Queuosine biosynthesis protein KQ254_RS05600 PF13356 Arm DNA-binding domain KQ254_RS05600 PF00589 Phage integrase family KQ254_RS05620 PF13936 Helix-turn-helix domain KQ254_RS05620 PF00665 Integrase core domain KQ254_RS05630 PF02384 N-6 DNA Methylase KQ254_RS05650 PF11867 Domain of unknown function (DUF3387) KQ254_RS05650 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) KQ254_RS05650 PF18766 SWI2/SNF2 ATPase KQ254_RS05660 PF07689 KaiB domain KQ254_RS05660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ254_RS05660 PF00512 His Kinase A (phospho-acceptor) domain KQ254_RS05665 PF08335 GlnD PII-uridylyltransferase KQ254_RS05665 PF03710 Glutamate-ammonia ligase adenylyltransferase KQ254_RS05670 PF01063 Amino-transferase class IV KQ254_RS05685 PF01522 Polysaccharide deacetylase KQ254_RS05690 PF00535 Glycosyl transferase family 2 KQ254_RS05695 PF13439 Glycosyltransferase Family 4 KQ254_RS05695 PF00534 Glycosyl transferases group 1 KQ254_RS05725 PF01336 OB-fold nucleic acid binding domain KQ254_RS05725 PF02938 GAD domain KQ254_RS05725 PF00152 tRNA synthetases class II (D, K and N) KQ254_RS05735 PF07715 TonB-dependent Receptor Plug Domain KQ254_RS05735 PF00593 TonB dependent receptor KQ254_RS05755 PF06146 Phosphate-starvation-inducible E KQ254_RS05760 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ254_RS05760 PF12806 Acetyl-CoA dehydrogenase C-terminal like KQ254_RS05760 PF02770 Acyl-CoA dehydrogenase, middle domain KQ254_RS05760 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ254_RS05765 PF12806 Acetyl-CoA dehydrogenase C-terminal like KQ254_RS05765 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ254_RS05765 PF02770 Acyl-CoA dehydrogenase, middle domain KQ254_RS05765 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ254_RS05775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ254_RS05775 PF00672 HAMP domain KQ254_RS05775 PF00512 His Kinase A (phospho-acceptor) domain KQ254_RS05780 PF00072 Response regulator receiver domain KQ254_RS05780 PF00486 Transcriptional regulatory protein, C terminal KQ254_RS05785 PF02696 Uncharacterized ACR, YdiU/UPF0061 family KQ254_RS05800 PF03009 Glycerophosphoryl diester phosphodiesterase family KQ254_RS05805 PF01923 Cobalamin adenosyltransferase KQ254_RS05810 PF07715 TonB-dependent Receptor Plug Domain KQ254_RS05810 PF00593 TonB dependent receptor KQ254_RS05815 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase KQ254_RS05820 PF00291 Pyridoxal-phosphate dependent enzyme KQ254_RS05845 PF00290 Tryptophan synthase alpha chain KQ254_RS05850 PF01039 Carboxyl transferase domain KQ254_RS05855 PF02875 Mur ligase family, glutamate ligase domain KQ254_RS05855 PF08245 Mur ligase middle domain KQ254_RS05870 PF00753 Metallo-beta-lactamase superfamily KQ254_RS05875 PF00578 AhpC/TSA family KQ254_RS05875 PF10417 C-terminal domain of 1-Cys peroxiredoxin KQ254_RS05885 PF01043 SecA preprotein cross-linking domain KQ254_RS05885 PF07517 SecA DEAD-like domain KQ254_RS05885 PF02810 SEC-C motif KQ254_RS05885 PF07516 SecA Wing and Scaffold domain KQ254_RS05895 PF00083 Sugar (and other) transporter KQ254_RS05895 PF07690 Major Facilitator Superfamily KQ254_RS05900 PF03006 Haemolysin-III related KQ254_RS05905 PF13610 DDE domain KQ254_RS05930 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KQ254_RS05930 PF00378 Enoyl-CoA hydratase/isomerase KQ254_RS05930 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KQ254_RS05935 PF02803 Thiolase, C-terminal domain KQ254_RS05935 PF00108 Thiolase, N-terminal domain KQ254_RS05940 PF12833 Helix-turn-helix domain KQ254_RS05940 PF02311 AraC-like ligand binding domain KQ254_RS05945 PF02515 CoA-transferase family III KQ254_RS05950 PF04966 Carbohydrate-selective porin, OprB family KQ254_RS05955 PF01011 PQQ enzyme repeat KQ254_RS05960 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KQ254_RS05960 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KQ254_RS05970 PF00893 Small Multidrug Resistance protein KQ254_RS05980 PF00108 Thiolase, N-terminal domain KQ254_RS05980 PF02803 Thiolase, C-terminal domain KQ254_RS05990 PF00691 OmpA family KQ254_RS05990 PF13505 Outer membrane protein beta-barrel domain KQ254_RS06015 PF00583 Acetyltransferase (GNAT) family KQ254_RS06020 PF10706 Aminoglycoside-2''-adenylyltransferase KQ254_RS06025 PF00132 Bacterial transferase hexapeptide (six repeats) KQ254_RS06030 PF00186 Dihydrofolate reductase KQ254_RS06035 PF00583 Acetyltransferase (GNAT) family KQ254_RS06065 PF18623 TnsE C-terminal domain KQ254_RS06070 PF06527 TniQ KQ254_RS06070 PF15978 Tn7-like transposition protein D KQ254_RS06075 PF13401 AAA domain KQ254_RS06075 PF11426 Tn7 transposition regulator TnsC KQ254_RS06080 PF00665 Integrase core domain KQ254_RS06085 PF08721 TnsA endonuclease C terminal KQ254_RS06085 PF08722 TnsA endonuclease N terminal KQ254_RS06095 PF00324 Amino acid permease KQ254_RS06100 PF08468 Methyltransferase small domain N-terminal KQ254_RS06100 PF05175 Methyltransferase small domain KQ254_RS06105 PF00860 Permease family KQ254_RS06110 PF00679 Elongation factor G C-terminus KQ254_RS06110 PF00009 Elongation factor Tu GTP binding domain KQ254_RS06110 PF03144 Elongation factor Tu domain 2 KQ254_RS06115 PF01741 Large-conductance mechanosensitive channel, MscL KQ254_RS06130 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KQ254_RS06130 PF06827 Zinc finger found in FPG and IleRS KQ254_RS06130 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KQ254_RS06135 PF02245 Methylpurine-DNA glycosylase (MPG) KQ254_RS06140 PF00593 TonB dependent receptor KQ254_RS06140 PF07715 TonB-dependent Receptor Plug Domain KQ254_RS06145 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KQ254_RS06160 PF13098 Thioredoxin-like domain KQ254_RS06160 PF10411 Disulfide bond isomerase protein N-terminus KQ254_RS06165 PF01571 Aminomethyltransferase folate-binding domain KQ254_RS06180 PF04343 Protein of unknown function, DUF488 KQ254_RS06185 PF03831 PhnA domain KQ254_RS06185 PF08274 PhnA Zinc-Ribbon KQ254_RS06190 PF07411 Domain of unknown function (DUF1508) KQ254_RS06195 PF03129 Anticodon binding domain KQ254_RS06195 PF04073 Aminoacyl-tRNA editing domain KQ254_RS06195 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KQ254_RS06200 PF00873 AcrB/AcrD/AcrF family KQ254_RS06215 PF00072 Response regulator receiver domain KQ254_RS06220 PF00072 Response regulator receiver domain KQ254_RS06225 PF01584 CheW-like domain KQ254_RS06230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KQ254_RS06230 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term KQ254_RS06235 PF01584 CheW-like domain KQ254_RS06235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ254_RS06235 PF00072 Response regulator receiver domain KQ254_RS06235 PF01627 Hpt domain KQ254_RS06245 PF01546 Peptidase family M20/M25/M40 KQ254_RS06245 PF07687 Peptidase dimerisation domain KQ254_RS06250 PF08085 Entericidin EcnA/B family KQ254_RS06260 PF04304 Protein of unknown function (DUF454) KQ254_RS06265 PF03734 L,D-transpeptidase catalytic domain KQ254_RS06265 PF17969 L,D-transpeptidase C-terminal domain KQ254_RS06305 PF00667 FAD binding domain KQ254_RS06305 PF00258 Flavodoxin KQ254_RS06305 PF00175 Oxidoreductase NAD-binding domain KQ254_RS06315 PF12805 FUSC-like inner membrane protein yccS KQ254_RS06320 PF07690 Major Facilitator Superfamily KQ254_RS06325 PF00881 Nitroreductase family KQ254_RS06340 PF01235 Sodium:alanine symporter family KQ254_RS06345 PF01734 Patatin-like phospholipase KQ254_RS06350 PF13291 ACT domain KQ254_RS06350 PF00291 Pyridoxal-phosphate dependent enzyme KQ254_RS06355 PF05992 SbmA/BacA-like family KQ254_RS06360 PF01431 Peptidase family M13 KQ254_RS06360 PF05649 Peptidase family M13 KQ254_RS06385 PF13936 Helix-turn-helix domain KQ254_RS06385 PF00665 Integrase core domain KQ254_RS06400 PF02934 GatB/GatE catalytic domain KQ254_RS06400 PF02637 GatB domain KQ254_RS06405 PF01425 Amidase KQ254_RS06410 PF02686 Glu-tRNAGln amidotransferase C subunit KQ254_RS06420 PF04085 rod shape-determining protein MreC KQ254_RS06425 PF04093 rod shape-determining protein MreD KQ254_RS06430 PF02545 Maf-like protein KQ254_RS06435 PF10150 Ribonuclease E/G family KQ254_RS06435 PF00575 S1 RNA binding domain KQ254_RS06445 PF06974 Protein of unknown function (DUF1298) KQ254_RS06445 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain KQ254_RS06450 PF01507 Phosphoadenosine phosphosulfate reductase family KQ254_RS06465 PF02525 Flavodoxin-like fold KQ254_RS06485 PF02673 Bacitracin resistance protein BacA KQ254_RS06490 PF06719 AraC-type transcriptional regulator N-terminus KQ254_RS06490 PF12833 Helix-turn-helix domain KQ254_RS06495 PF00550 Phosphopantetheine attachment site KQ254_RS06495 PF09277 Erythronolide synthase, docking KQ254_RS06495 PF00109 Beta-ketoacyl synthase, N-terminal domain KQ254_RS06495 PF08990 Erythronolide synthase docking KQ254_RS06495 PF16197 Ketoacyl-synthetase C-terminal extension KQ254_RS06495 PF00698 Acyl transferase domain KQ254_RS06495 PF02801 Beta-ketoacyl synthase, C-terminal domain KQ254_RS06495 PF14765 Polyketide synthase dehydratase KQ254_RS06495 PF08240 Alcohol dehydrogenase GroES-like domain KQ254_RS06495 PF08659 KR domain KQ254_RS06500 PF01965 DJ-1/PfpI family KQ254_RS06540 PF00324 Amino acid permease KQ254_RS06545 PF04303 PrpF protein KQ254_RS06550 PF00348 Polyprenyl synthetase KQ254_RS06555 PF04237 YjbR KQ254_RS06560 PF01145 SPFH domain / Band 7 family KQ254_RS06570 PF01734 Patatin-like phospholipase KQ254_RS06590 PF08019 Phosphoethanolamine transferase EptA/EptB KQ254_RS06590 PF00884 Sulfatase KQ254_RS06595 PF00072 Response regulator receiver domain KQ254_RS06595 PF00486 Transcriptional regulatory protein, C terminal KQ254_RS06600 PF00512 His Kinase A (phospho-acceptor) domain KQ254_RS06600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ254_RS06600 PF08521 Two-component sensor kinase N-terminal KQ254_RS06610 PF00909 Ammonium Transporter Family KQ254_RS06615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ254_RS06615 PF03466 LysR substrate binding domain KQ254_RS06635 PF00133 tRNA synthetases class I (I, L, M and V) KQ254_RS06635 PF08264 Anticodon-binding domain of tRNA KQ254_RS06635 PF10458 Valyl tRNA synthetase tRNA binding arm KQ254_RS06655 PF01906 Putative heavy-metal-binding KQ254_RS06660 PF01906 Putative heavy-metal-binding KQ254_RS06665 PF02321 Outer membrane efflux protein KQ254_RS06670 PF00873 AcrB/AcrD/AcrF family KQ254_RS06675 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KQ254_RS06675 PF00529 HlyD membrane-fusion protein of T1SS KQ254_RS06680 PF01569 PAP2 superfamily KQ254_RS06690 PF00348 Polyprenyl synthetase KQ254_RS06700 PF00829 Ribosomal prokaryotic L21 protein KQ254_RS06705 PF01016 Ribosomal L27 protein KQ254_RS06710 PF03548 Outer membrane lipoprotein carrier protein LolA KQ254_RS06720 PF02403 Seryl-tRNA synthetase N-terminal domain KQ254_RS06720 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KQ254_RS06725 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KQ254_RS06725 PF10414 Sirohaem synthase dimerisation region KQ254_RS06725 PF14824 Sirohaem biosynthesis protein central KQ254_RS06730 PF00588 SpoU rRNA Methylase family KQ254_RS06735 PF01638 HxlR-like helix-turn-helix KQ254_RS06740 PF03358 NADPH-dependent FMN reductase KQ254_RS06745 PF13520 Amino acid permease KQ254_RS06750 PF00465 Iron-containing alcohol dehydrogenase KQ254_RS06760 PF03099 Biotin/lipoate A/B protein ligase family KQ254_RS06765 PF04359 Protein of unknown function (DUF493) KQ254_RS06770 PF04542 Sigma-70 region 2 KQ254_RS06770 PF04546 Sigma-70, non-essential region KQ254_RS06770 PF03979 Sigma-70 factor, region 1.1 KQ254_RS06770 PF00140 Sigma-70 factor, region 1.2 KQ254_RS06770 PF04539 Sigma-70 region 3 KQ254_RS06770 PF04545 Sigma-70, region 4 KQ254_RS06785 PF17773 UPF0176 acylphosphatase like domain KQ254_RS06785 PF00581 Rhodanese-like domain KQ254_RS06795 PF00285 Citrate synthase, C-terminal domain KQ254_RS06800 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KQ254_RS06805 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KQ254_RS06810 PF00890 FAD binding domain KQ254_RS06810 PF02910 Fumarate reductase flavoprotein C-term KQ254_RS06815 PF13085 2Fe-2S iron-sulfur cluster binding domain KQ254_RS06830 PF02779 Transketolase, pyrimidine binding domain KQ254_RS06830 PF16078 2-oxoglutarate dehydrogenase N-terminus KQ254_RS06830 PF00676 Dehydrogenase E1 component KQ254_RS06830 PF16870 2-oxoglutarate dehydrogenase C-terminal KQ254_RS06835 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KQ254_RS06835 PF00364 Biotin-requiring enzyme KQ254_RS06835 PF02817 e3 binding domain KQ254_RS06840 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ254_RS06840 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KQ254_RS06845 PF08442 ATP-grasp domain KQ254_RS06845 PF00549 CoA-ligase KQ254_RS06850 PF02629 CoA binding domain KQ254_RS06850 PF00549 CoA-ligase KQ254_RS06855 PF00579 tRNA synthetases class I (W and Y) KQ254_RS06860 PF05661 Protein of unknown function (DUF808) KQ254_RS06865 PF04228 Putative neutral zinc metallopeptidase KQ254_RS06870 PF00999 Sodium/hydrogen exchanger family KQ254_RS06885 PF09587 Bacterial capsule synthesis protein PGA_cap KQ254_RS06895 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KQ254_RS06900 PF00582 Universal stress protein family KQ254_RS06905 PF00132 Bacterial transferase hexapeptide (six repeats) KQ254_RS06910 PF01042 Endoribonuclease L-PSP KQ254_RS06920 PF01272 Transcription elongation factor, GreA/GreB, C-term KQ254_RS06920 PF03449 Transcription elongation factor, N-terminal KQ254_RS06925 PF02142 MGS-like domain KQ254_RS06925 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KQ254_RS06925 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KQ254_RS06930 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KQ254_RS06930 PF00117 Glutamine amidotransferase class-I KQ254_RS06945 PF01985 CRS1 / YhbY (CRM) domain KQ254_RS06950 PF01728 FtsJ-like methyltransferase KQ254_RS06955 PF06480 FtsH Extracellular KQ254_RS06955 PF17862 AAA+ lid domain KQ254_RS06955 PF01434 Peptidase family M41 KQ254_RS06955 PF00004 ATPase family associated with various cellular activities (AAA) KQ254_RS06960 PF00809 Pterin binding enzyme KQ254_RS06980 PF09423 PhoD-like phosphatase KQ254_RS06980 PF16655 PhoD-like phosphatase, N-terminal domain KQ254_RS06995 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain KQ254_RS06995 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KQ254_RS07010 PF00083 Sugar (and other) transporter KQ254_RS07015 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KQ254_RS07015 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KQ254_RS07020 PF01266 FAD dependent oxidoreductase KQ254_RS07020 PF16901 C-terminal domain of alpha-glycerophosphate oxidase KQ254_RS07025 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain KQ254_RS07025 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain KQ254_RS07030 PF00781 Diacylglycerol kinase catalytic domain KQ254_RS07035 PF00149 Calcineurin-like phosphoesterase KQ254_RS07040 PF00166 Chaperonin 10 Kd subunit KQ254_RS07045 PF00118 TCP-1/cpn60 chaperonin family KQ254_RS07050 PF01219 Prokaryotic diacylglycerol kinase KQ254_RS07055 PF00753 Metallo-beta-lactamase superfamily KQ254_RS07060 PF03009 Glycerophosphoryl diester phosphodiesterase family KQ254_RS07065 PF00873 AcrB/AcrD/AcrF family KQ254_RS07075 PF01435 Peptidase family M48 KQ254_RS07080 PF01464 Transglycosylase SLT domain KQ254_RS07085 PF01171 PP-loop family KQ254_RS07095 PF01464 Transglycosylase SLT domain KQ254_RS07095 PF00497 Bacterial extracellular solute-binding proteins, family 3 KQ254_RS07100 PF01272 Transcription elongation factor, GreA/GreB, C-term KQ254_RS07100 PF03449 Transcription elongation factor, N-terminal KQ254_RS07115 PF00501 AMP-binding enzyme KQ254_RS07115 PF13193 AMP-binding enzyme C-terminal domain KQ254_RS07115 PF00668 Condensation domain KQ254_RS07115 PF00975 Thioesterase domain KQ254_RS07115 PF00550 Phosphopantetheine attachment site KQ254_RS07140 PF09857 Putative toxin of bacterial toxin-antitoxin pair KQ254_RS07160 PF00881 Nitroreductase family KQ254_RS07175 PF02595 Glycerate kinase family KQ254_RS07180 PF00384 Molybdopterin oxidoreductase KQ254_RS07185 PF02634 FdhD/NarQ family KQ254_RS07190 PF06803 Protein of unknown function (DUF1232) KQ254_RS07195 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KQ254_RS07195 PF11890 Domain of unknown function (DUF3410) KQ254_RS07195 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KQ254_RS07200 PF00152 tRNA synthetases class II (D, K and N) KQ254_RS07210 PF18073 Rubredoxin metal binding domain KQ254_RS07215 PF00324 Amino acid permease KQ254_RS07225 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KQ254_RS07225 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KQ254_RS07230 PF01678 Diaminopimelate epimerase KQ254_RS07235 PF01810 LysE type translocator KQ254_RS07240 PF02899 Phage integrase, N-terminal SAM-like domain KQ254_RS07240 PF00589 Phage integrase family KQ254_RS07245 PF01012 Electron transfer flavoprotein domain KQ254_RS07250 PF00766 Electron transfer flavoprotein FAD-binding domain KQ254_RS07250 PF01012 Electron transfer flavoprotein domain KQ254_RS07255 PF03989 DNA gyrase C-terminal domain, beta-propeller KQ254_RS07255 PF00521 DNA gyrase/topoisomerase IV, subunit A KQ254_RS07270 PF00535 Glycosyl transferase family 2 KQ254_RS07290 PF13533 Biotin-lipoyl like KQ254_RS07300 PF00266 Aminotransferase class-V KQ254_RS07310 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 KQ254_RS07320 PF02687 FtsX-like permease family KQ254_RS07320 PF12704 MacB-like periplasmic core domain KQ254_RS07325 PF00005 ABC transporter KQ254_RS07330 PF00753 Metallo-beta-lactamase superfamily KQ254_RS07330 PF13567 Domain of unknown function (DUF4131) KQ254_RS07330 PF03772 Competence protein KQ254_RS07340 PF06965 Na+/H+ antiporter 1 KQ254_RS07340 PF01343 Peptidase family S49 KQ254_RS07345 PF12697 Alpha/beta hydrolase family KQ254_RS07350 PF00551 Formyl transferase KQ254_RS07355 PF02769 AIR synthase related protein, C-terminal domain KQ254_RS07355 PF00586 AIR synthase related protein, N-terminal domain KQ254_RS07360 PF01594 AI-2E family transporter KQ254_RS07365 PF00308 Bacterial dnaA protein KQ254_RS07365 PF08299 Bacterial dnaA protein helix-turn-helix KQ254_RS07365 PF11638 DnaA N-terminal domain KQ254_RS07380 PF13936 Helix-turn-helix domain KQ254_RS07380 PF00665 Integrase core domain KQ254_RS07405 PF08032 RNA 2'-O ribose methyltransferase substrate binding KQ254_RS07405 PF00588 SpoU rRNA Methylase family KQ254_RS07410 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain KQ254_RS07420 PF00691 OmpA family KQ254_RS07425 PF07676 WD40-like Beta Propeller Repeat KQ254_RS07425 PF04052 TolB amino-terminal domain KQ254_RS07435 PF02472 Biopolymer transport protein ExbD/TolR KQ254_RS07440 PF01618 MotA/TolQ/ExbB proton channel family KQ254_RS07445 PF03061 Thioesterase superfamily KQ254_RS07450 PF07687 Peptidase dimerisation domain KQ254_RS07450 PF01546 Peptidase family M20/M25/M40 KQ254_RS07455 PF17864 RuvB AAA lid domain KQ254_RS07455 PF05496 Holliday junction DNA helicase RuvB P-loop domain KQ254_RS07455 PF05491 RuvB C-terminal winged helix domain KQ254_RS07460 PF01330 RuvA N terminal domain KQ254_RS07460 PF07499 RuvA, C-terminal domain KQ254_RS07465 PF01966 HD domain KQ254_RS07470 PF02769 AIR synthase related protein, C-terminal domain KQ254_RS07470 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal KQ254_RS07470 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain KQ254_RS07475 PF07690 Major Facilitator Superfamily KQ254_RS07485 PF01784 NIF3 (NGG1p interacting factor 3) KQ254_RS07490 PF00378 Enoyl-CoA hydratase/isomerase KQ254_RS07495 PF00293 NUDIX domain KQ254_RS07495 PF01467 Cytidylyltransferase-like KQ254_RS07505 PF00578 AhpC/TSA family KQ254_RS07520 PF06508 Queuosine biosynthesis protein QueC KQ254_RS07530 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal KQ254_RS07530 PF00132 Bacterial transferase hexapeptide (six repeats) KQ254_RS07530 PF14602 Hexapeptide repeat of succinyl-transferase KQ254_RS07540 PF03466 LysR substrate binding domain KQ254_RS07540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ254_RS07545 PF00005 ABC transporter KQ254_RS07545 PF12857 TOBE-like domain KQ254_RS07550 PF00528 Binding-protein-dependent transport system inner membrane component KQ254_RS07555 PF00528 Binding-protein-dependent transport system inner membrane component KQ254_RS07570 PF01063 Amino-transferase class IV KQ254_RS07575 PF02618 YceG-like family KQ254_RS07580 PF02223 Thymidylate kinase KQ254_RS07590 PF02910 Fumarate reductase flavoprotein C-term KQ254_RS07590 PF00890 FAD binding domain KQ254_RS07595 PF13180 PDZ domain KQ254_RS07605 PF06421 GTP-binding protein LepA C-terminus KQ254_RS07605 PF03144 Elongation factor Tu domain 2 KQ254_RS07605 PF00009 Elongation factor Tu GTP binding domain KQ254_RS07605 PF00679 Elongation factor G C-terminus KQ254_RS07610 PF10502 Signal peptidase, peptidase S26 KQ254_RS07620 PF00035 Double-stranded RNA binding motif KQ254_RS07620 PF14622 Ribonuclease-III-like KQ254_RS07625 PF07650 KH domain KQ254_RS07625 PF01926 50S ribosome-binding GTPase KQ254_RS07635 PF02565 Recombination protein O C terminal KQ254_RS07635 PF11967 Recombination protein O N terminal KQ254_RS07640 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ KQ254_RS07650 PF00106 short chain dehydrogenase KQ254_RS07680 PF00155 Aminotransferase class I and II KQ254_RS07690 PF17151 Periplasmic sensor domain KQ254_RS07690 PF00990 Diguanylate cyclase, GGDEF domain KQ254_RS07700 PF17757 UvrB interaction domain KQ254_RS07700 PF02151 UvrB/uvrC motif KQ254_RS07700 PF04851 Type III restriction enzyme, res subunit KQ254_RS07700 PF00271 Helicase conserved C-terminal domain KQ254_RS07700 PF12344 Ultra-violet resistance protein B KQ254_RS07710 PF00892 EamA-like transporter family KQ254_RS07715 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KQ254_RS07715 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KQ254_RS07730 PF01018 GTP1/OBG KQ254_RS07730 PF01926 50S ribosome-binding GTPase KQ254_RS07735 PF00696 Amino acid kinase family KQ254_RS07735 PF01472 PUA domain KQ254_RS07745 PF07759 Protein of unknown function (DUF1615) KQ254_RS07750 PF01207 Dihydrouridine synthase (Dus) KQ254_RS07755 PF03060 Nitronate monooxygenase KQ254_RS07770 PF02350 UDP-N-acetylglucosamine 2-epimerase KQ254_RS07800 PF03441 FAD binding domain of DNA photolyase KQ254_RS07800 PF00875 DNA photolyase KQ254_RS07805 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KQ254_RS07810 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ254_RS07825 PF03971 Monomeric isocitrate dehydrogenase KQ254_RS07830 PF00849 RNA pseudouridylate synthase KQ254_RS07835 PF00180 Isocitrate/isopropylmalate dehydrogenase KQ254_RS07855 PF06779 Uncharacterised MFS-type transporter YbfB KQ254_RS07860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ254_RS07860 PF03466 LysR substrate binding domain KQ254_RS07865 PF00375 Sodium:dicarboxylate symporter family KQ254_RS07870 PF02567 Phenazine biosynthesis-like protein KQ254_RS07875 PF00675 Insulinase (Peptidase family M16) KQ254_RS07875 PF05193 Peptidase M16 inactive domain KQ254_RS07900 PF02581 Thiamine monophosphate synthase KQ254_RS07905 PF00202 Aminotransferase class-III KQ254_RS07915 PF00849 RNA pseudouridylate synthase KQ254_RS07920 PF00271 Helicase conserved C-terminal domain KQ254_RS07920 PF12137 RNA polymerase recycling family C-terminal KQ254_RS07920 PF00176 SNF2 family N-terminal domain KQ254_RS07920 PF18339 RapA N-terminal Tudor like domain 1 KQ254_RS07920 PF18337 RapA N-terminal Tudor like domain KQ254_RS07930 PF00440 Bacterial regulatory proteins, tetR family KQ254_RS07935 PF00970 Oxidoreductase FAD-binding domain KQ254_RS07935 PF00111 2Fe-2S iron-sulfur cluster binding domain KQ254_RS07935 PF00175 Oxidoreductase NAD-binding domain KQ254_RS07940 PF00487 Fatty acid desaturase KQ254_RS07945 PF02525 Flavodoxin-like fold KQ254_RS07960 PF00202 Aminotransferase class-III KQ254_RS07965 PF00282 Pyridoxal-dependent decarboxylase conserved domain KQ254_RS07970 PF00171 Aldehyde dehydrogenase family KQ254_RS07975 PF01037 Lrp/AsnC ligand binding domain KQ254_RS07980 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KQ254_RS07980 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KQ254_RS07980 PF00205 Thiamine pyrophosphate enzyme, central domain KQ254_RS07985 PF00324 Amino acid permease KQ254_RS07990 PF12849 PBP superfamily domain KQ254_RS07995 PF00528 Binding-protein-dependent transport system inner membrane component KQ254_RS08000 PF00528 Binding-protein-dependent transport system inner membrane component KQ254_RS08005 PF00005 ABC transporter KQ254_RS08010 PF08496 Peptidase family S49 N-terminal KQ254_RS08010 PF01343 Peptidase family S49 KQ254_RS08025 PF08328 Adenylosuccinate lyase C-terminal KQ254_RS08025 PF00206 Lyase KQ254_RS08030 PF04356 Protein of unknown function (DUF489) KQ254_RS08040 PF13344 Haloacid dehalogenase-like hydrolase KQ254_RS08040 PF00293 NUDIX domain KQ254_RS08045 PF00132 Bacterial transferase hexapeptide (six repeats) KQ254_RS08050 PF07943 Penicillin-binding protein 5, C-terminal domain KQ254_RS08050 PF00768 D-alanyl-D-alanine carboxypeptidase KQ254_RS08065 PF01975 Survival protein SurE KQ254_RS08070 PF01551 Peptidase family M23 KQ254_RS08070 PF01476 LysM domain KQ254_RS08075 PF03466 LysR substrate binding domain KQ254_RS08075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ254_RS08080 PF13654 AAA domain KQ254_RS08080 PF05362 Lon protease (S16) C-terminal proteolytic domain KQ254_RS08085 PF07690 Major Facilitator Superfamily KQ254_RS08090 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KQ254_RS08095 PF13593 SBF-like CPA transporter family (DUF4137) KQ254_RS08100 PF01197 Ribosomal protein L31 KQ254_RS08105 PF12792 CSS motif domain associated with EAL KQ254_RS08105 PF00563 EAL domain KQ254_RS08115 PF04055 Radical SAM superfamily KQ254_RS08120 PF09285 Elongation factor P, C-terminal KQ254_RS08120 PF01132 Elongation factor P (EF-P) OB domain KQ254_RS08120 PF08207 Elongation factor P (EF-P) KOW-like domain KQ254_RS08125 PF02554 Carbon starvation protein CstA KQ254_RS08125 PF13722 5TM C-terminal transporter carbon starvation CstA KQ254_RS08130 PF04328 Selenoprotein, putative KQ254_RS08140 PF13356 Arm DNA-binding domain KQ254_RS08140 PF00589 Phage integrase family KQ254_RS08175 PF02796 Helix-turn-helix domain of resolvase KQ254_RS08175 PF00239 Resolvase, N terminal domain KQ254_RS08230 PF02678 Pirin KQ254_RS08230 PF17954 Quercetinase C-terminal cupin domain KQ254_RS08235 PF00291 Pyridoxal-phosphate dependent enzyme KQ254_RS08240 PF08348 YheO-like PAS domain KQ254_RS08240 PF13309 HTH domain KQ254_RS08250 PF13193 AMP-binding enzyme C-terminal domain KQ254_RS08250 PF00501 AMP-binding enzyme KQ254_RS08250 PF00668 Condensation domain KQ254_RS08255 PF13193 AMP-binding enzyme C-terminal domain KQ254_RS08255 PF00501 AMP-binding enzyme KQ254_RS08255 PF00975 Thioesterase domain KQ254_RS08255 PF00550 Phosphopantetheine attachment site KQ254_RS08255 PF00668 Condensation domain KQ254_RS08260 PF01032 FecCD transport family KQ254_RS08265 PF01032 FecCD transport family KQ254_RS08270 PF00005 ABC transporter KQ254_RS08275 PF01497 Periplasmic binding protein KQ254_RS08280 PF07715 TonB-dependent Receptor Plug Domain KQ254_RS08280 PF00593 TonB dependent receptor KQ254_RS08285 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) KQ254_RS08290 PF00668 Condensation domain KQ254_RS08290 PF00550 Phosphopantetheine attachment site KQ254_RS08290 PF00501 AMP-binding enzyme KQ254_RS08300 PF00857 Isochorismatase family KQ254_RS08300 PF00550 Phosphopantetheine attachment site KQ254_RS08305 PF00282 Pyridoxal-dependent decarboxylase conserved domain KQ254_RS08315 PF00664 ABC transporter transmembrane region KQ254_RS08315 PF00005 ABC transporter KQ254_RS08320 PF00005 ABC transporter KQ254_RS08325 PF00975 Thioesterase domain KQ254_RS08330 PF17837 4'-phosphopantetheinyl transferase N-terminal domain KQ254_RS08330 PF01648 4'-phosphopantetheinyl transferase superfamily KQ254_RS08335 PF00425 chorismate binding enzyme KQ254_RS08345 PF01208 Uroporphyrinogen decarboxylase (URO-D) KQ254_RS08350 PF05675 Protein of unknown function (DUF817) KQ254_RS08370 PF13610 DDE domain KQ254_RS08385 PF01227 GTP cyclohydrolase I KQ254_RS08390 PF00111 2Fe-2S iron-sulfur cluster binding domain KQ254_RS08390 PF01799 [2Fe-2S] binding domain KQ254_RS08395 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain KQ254_RS08395 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase KQ254_RS08410 PF00218 Indole-3-glycerol phosphate synthase KQ254_RS08415 PF02885 Glycosyl transferase family, helical bundle domain KQ254_RS08415 PF00591 Glycosyl transferase family, a/b domain KQ254_RS08420 PF07715 TonB-dependent Receptor Plug Domain KQ254_RS08420 PF00593 TonB dependent receptor KQ254_RS08425 PF01433 Peptidase family M1 domain KQ254_RS08425 PF11838 ERAP1-like C-terminal domain KQ254_RS08430 PF00117 Glutamine amidotransferase class-I KQ254_RS08445 PF13539 D-alanyl-D-alanine carboxypeptidase KQ254_RS08460 PF00854 POT family KQ254_RS08465 PF03951 Glutamine synthetase, beta-Grasp domain KQ254_RS08465 PF00120 Glutamine synthetase, catalytic domain KQ254_RS08470 PF04345 Chorismate lyase KQ254_RS08475 PF01040 UbiA prenyltransferase family KQ254_RS08510 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KQ254_RS08510 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KQ254_RS08515 PF01784 NIF3 (NGG1p interacting factor 3) KQ254_RS08520 PF13180 PDZ domain KQ254_RS08525 PF01743 Poly A polymerase head domain KQ254_RS08525 PF12627 Probable RNA and SrmB- binding site of polymerase A KQ254_RS08530 PF00390 Malic enzyme, N-terminal domain KQ254_RS08530 PF03949 Malic enzyme, NAD binding domain KQ254_RS08530 PF01515 Phosphate acetyl/butaryl transferase KQ254_RS08535 PF03707 Bacterial signalling protein N terminal repeat KQ254_RS08535 PF00563 EAL domain KQ254_RS08535 PF00990 Diguanylate cyclase, GGDEF domain KQ254_RS08540 PF04452 RNA methyltransferase KQ254_RS08545 PF02219 Methylenetetrahydrofolate reductase KQ254_RS08550 PF05221 S-adenosyl-L-homocysteine hydrolase KQ254_RS08550 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KQ254_RS08565 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ254_RS08565 PF02770 Acyl-CoA dehydrogenase, middle domain KQ254_RS08565 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ254_RS08565 PF09317 Domain of unknown function (DUF1974) KQ254_RS08570 PF04055 Radical SAM superfamily KQ254_RS08575 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ254_RS08575 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KQ254_RS08585 PF07690 Major Facilitator Superfamily KQ254_RS08595 PF00557 Metallopeptidase family M24 KQ254_RS08600 PF00318 Ribosomal protein S2 KQ254_RS08605 PF00889 Elongation factor TS KQ254_RS08615 PF12833 Helix-turn-helix domain KQ254_RS08635 PF05036 Sporulation related domain KQ254_RS08635 PF03330 Lytic transglycolase KQ254_RS08640 PF13406 Transglycosylase SLT domain KQ254_RS08645 PF01098 Cell cycle protein KQ254_RS08655 PF14489 QueF-like protein KQ254_RS08655 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term KQ254_RS08660 PF01061 ABC-2 type transporter KQ254_RS08665 PF00005 ABC transporter KQ254_RS08670 PF00589 Phage integrase family KQ254_RS08770 PF00772 DnaB-like helicase N terminal domain KQ254_RS08770 PF03796 DnaB-like helicase C terminal domain KQ254_RS08985 PF08346 AntA/AntB antirepressor KQ254_RS08985 PF10548 P22AR C-terminal domain KQ254_RS09060 PF00464 Serine hydroxymethyltransferase KQ254_RS09065 PF02321 Outer membrane efflux protein KQ254_RS09070 PF00873 AcrB/AcrD/AcrF family KQ254_RS09075 PF13533 Biotin-lipoyl like KQ254_RS09080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ254_RS09080 PF03466 LysR substrate binding domain KQ254_RS09085 PF00893 Small Multidrug Resistance protein KQ254_RS09090 PF00037 4Fe-4S binding domain KQ254_RS09095 PF16325 Peptidase family U32 C-terminal domain KQ254_RS09095 PF01136 Peptidase family U32 KQ254_RS09100 PF00392 Bacterial regulatory proteins, gntR family KQ254_RS09100 PF00155 Aminotransferase class I and II KQ254_RS09105 PF02567 Phenazine biosynthesis-like protein KQ254_RS09110 PF00970 Oxidoreductase FAD-binding domain KQ254_RS09110 PF00175 Oxidoreductase NAD-binding domain KQ254_RS09115 PF18389 TrmO C-terminal domain KQ254_RS09115 PF01980 tRNA-methyltransferase O KQ254_RS09125 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KQ254_RS09125 PF00437 Type II/IV secretion system protein KQ254_RS09135 PF00486 Transcriptional regulatory protein, C terminal KQ254_RS09135 PF00072 Response regulator receiver domain KQ254_RS09140 PF08521 Two-component sensor kinase N-terminal KQ254_RS09140 PF00512 His Kinase A (phospho-acceptor) domain KQ254_RS09140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ254_RS09150 PF00293 NUDIX domain KQ254_RS09160 PF00912 Transglycosylase KQ254_RS09160 PF14814 Bifunctional transglycosylase second domain KQ254_RS09160 PF00905 Penicillin binding protein transpeptidase domain KQ254_RS09165 PF01513 ATP-NAD kinase KQ254_RS09170 PF07023 Protein of unknown function (DUF1315) KQ254_RS09175 PF00591 Glycosyl transferase family, a/b domain KQ254_RS09175 PF02885 Glycosyl transferase family, helical bundle domain KQ254_RS09180 PF00375 Sodium:dicarboxylate symporter family KQ254_RS09185 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ254_RS09185 PF02770 Acyl-CoA dehydrogenase, middle domain KQ254_RS09185 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ254_RS09195 PF01817 Chorismate mutase type II KQ254_RS09195 PF00800 Prephenate dehydratase KQ254_RS09195 PF01842 ACT domain KQ254_RS09200 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KQ254_RS09210 PF01546 Peptidase family M20/M25/M40 KQ254_RS09210 PF07687 Peptidase dimerisation domain KQ254_RS09215 PF00753 Metallo-beta-lactamase superfamily KQ254_RS09225 PF03883 Peroxide stress protein YaaA KQ254_RS09235 PF05690 Thiazole biosynthesis protein ThiG KQ254_RS09245 PF04241 Protein of unknown function (DUF423) KQ254_RS09250 PF04542 Sigma-70 region 2 KQ254_RS09250 PF04545 Sigma-70, region 4 KQ254_RS09250 PF00140 Sigma-70 factor, region 1.2 KQ254_RS09265 PF00313 'Cold-shock' DNA-binding domain KQ254_RS09270 PF00270 DEAD/DEAH box helicase KQ254_RS09270 PF00271 Helicase conserved C-terminal domain KQ254_RS09280 PF00881 Nitroreductase family KQ254_RS09285 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KQ254_RS09285 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus KQ254_RS09305 PF01180 Dihydroorotate dehydrogenase KQ254_RS09310 PF02674 Colicin V production protein KQ254_RS09315 PF00156 Phosphoribosyl transferase domain KQ254_RS09330 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KQ254_RS09330 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KQ254_RS09335 PF01435 Peptidase family M48 KQ254_RS09340 PF09424 Yqey-like protein KQ254_RS09345 PF01165 Ribosomal protein S21 KQ254_RS09350 PF00814 Glycoprotease family KQ254_RS09370 PF03793 PASTA domain KQ254_RS09370 PF00069 Protein kinase domain KQ254_RS09395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ254_RS09395 PF03466 LysR substrate binding domain KQ254_RS09400 PF00202 Aminotransferase class-III KQ254_RS09405 PF00171 Aldehyde dehydrogenase family KQ254_RS09410 PF00324 Amino acid permease KQ254_RS09440 PF04076 Bacterial OB fold (BOF) protein KQ254_RS09465 PF00561 alpha/beta hydrolase fold KQ254_RS09470 PF03616 Sodium/glutamate symporter KQ254_RS09480 PF07729 FCD domain KQ254_RS09480 PF00392 Bacterial regulatory proteins, gntR family KQ254_RS09495 PF13936 Helix-turn-helix domain KQ254_RS09495 PF00665 Integrase core domain KQ254_RS09540 PF08946 Osmosensory transporter coiled coil KQ254_RS09540 PF00083 Sugar (and other) transporter KQ254_RS09565 PF04403 Paraquat-inducible protein A KQ254_RS09570 PF02470 MlaD protein KQ254_RS09585 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ254_RS09585 PF00085 Thioredoxin KQ254_RS09590 PF01177 Asp/Glu/Hydantoin racemase KQ254_RS09605 PF00144 Beta-lactamase KQ254_RS09620 PF05675 Protein of unknown function (DUF817) KQ254_RS09625 PF01208 Uroporphyrinogen decarboxylase (URO-D) KQ254_RS09645 PF07995 Glucose / Sorbosone dehydrogenase KQ254_RS09665 PF00375 Sodium:dicarboxylate symporter family KQ254_RS09675 PF16123 Hydroxyacylglutathione hydrolase C-terminus KQ254_RS09675 PF00753 Metallo-beta-lactamase superfamily KQ254_RS09680 PF00528 Binding-protein-dependent transport system inner membrane component KQ254_RS09685 PF00005 ABC transporter KQ254_RS09685 PF09383 NIL domain KQ254_RS09690 PF03180 NLPA lipoprotein KQ254_RS09695 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KQ254_RS09695 PF02844 Phosphoribosylglycinamide synthetase, N domain KQ254_RS09695 PF02843 Phosphoribosylglycinamide synthetase, C domain KQ254_RS09700 PF01808 AICARFT/IMPCHase bienzyme KQ254_RS09700 PF02142 MGS-like domain KQ254_RS09705 PF02954 Bacterial regulatory protein, Fis family KQ254_RS09725 PF01134 Glucose inhibited division protein A KQ254_RS09725 PF13932 GidA associated domain KQ254_RS09735 PF14403 Circularly permuted ATP-grasp type 2 KQ254_RS09745 PF08379 Bacterial transglutaminase-like N-terminal region KQ254_RS09745 PF01841 Transglutaminase-like superfamily KQ254_RS09755 PF00842 Alanine racemase, C-terminal domain KQ254_RS09755 PF01168 Alanine racemase, N-terminal domain KQ254_RS09760 PF00772 DnaB-like helicase N terminal domain KQ254_RS09760 PF03796 DnaB-like helicase C terminal domain KQ254_RS09765 PF03948 Ribosomal protein L9, C-terminal domain KQ254_RS09765 PF01281 Ribosomal protein L9, N-terminal domain KQ254_RS09770 PF01084 Ribosomal protein S18 KQ254_RS09775 PF01250 Ribosomal protein S6 KQ254_RS09780 PF01040 UbiA prenyltransferase family KQ254_RS09785 PF03626 Prokaryotic Cytochrome C oxidase subunit IV KQ254_RS09790 PF00510 Cytochrome c oxidase subunit III KQ254_RS09795 PF00115 Cytochrome C and Quinol oxidase polypeptide I KQ254_RS09800 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KQ254_RS09800 PF06481 COX Aromatic Rich Motif KQ254_RS09810 PF00391 PEP-utilising enzyme, mobile domain KQ254_RS09810 PF02896 PEP-utilising enzyme, TIM barrel domain KQ254_RS09810 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KQ254_RS09815 PF03618 Kinase/pyrophosphorylase KQ254_RS09825 PF01522 Polysaccharide deacetylase KQ254_RS09825 PF14883 Hypothetical glycosyl hydrolase family 13 KQ254_RS09830 PF00535 Glycosyl transferase family 2 KQ254_RS09835 PF13994 PgaD-like protein KQ254_RS09845 PF00296 Luciferase-like monooxygenase KQ254_RS09865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ254_RS09865 PF03466 LysR substrate binding domain KQ254_RS09875 PF03462 PCRF domain KQ254_RS09875 PF00472 RF-1 domain KQ254_RS09880 PF13847 Methyltransferase domain KQ254_RS09880 PF17827 PrmC N-terminal domain KQ254_RS09885 PF00528 Binding-protein-dependent transport system inner membrane component KQ254_RS09890 PF09084 NMT1/THI5 like KQ254_RS09895 PF12833 Helix-turn-helix domain KQ254_RS09900 PF00106 short chain dehydrogenase KQ254_RS09905 PF02770 Acyl-CoA dehydrogenase, middle domain KQ254_RS09905 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ254_RS09905 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ254_RS09910 PF13193 AMP-binding enzyme C-terminal domain KQ254_RS09910 PF00501 AMP-binding enzyme KQ254_RS09915 PF01613 Flavin reductase like domain KQ254_RS09920 PF00899 ThiF family KQ254_RS09925 PF03109 ABC1 family KQ254_RS09940 PF03814 Potassium-transporting ATPase A subunit KQ254_RS09950 PF02669 K+-transporting ATPase, c chain KQ254_RS09955 PF13493 Domain of unknown function (DUF4118) KQ254_RS09955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ254_RS09955 PF00512 His Kinase A (phospho-acceptor) domain KQ254_RS09955 PF02702 Osmosensitive K+ channel His kinase sensor domain KQ254_RS09960 PF00486 Transcriptional regulatory protein, C terminal KQ254_RS09960 PF00072 Response regulator receiver domain KQ254_RS09965 PF00120 Glutamine synthetase, catalytic domain KQ254_RS09975 PF03232 Ubiquinone biosynthesis protein COQ7 KQ254_RS09980 PF07690 Major Facilitator Superfamily KQ254_RS09985 PF01103 Surface antigen KQ254_RS09985 PF07244 Surface antigen variable number repeat KQ254_RS09985 PF17243 POTRA domain TamA domain 1 KQ254_RS10000 PF11791 Aconitate B N-terminal domain KQ254_RS10000 PF00330 Aconitase family (aconitate hydratase) KQ254_RS10000 PF06434 Aconitate hydratase 2 N-terminus KQ254_RS10010 PF13737 Transposase DDE domain KQ254_RS10020 PF00027 Cyclic nucleotide-binding domain KQ254_RS10020 PF00520 Ion transport protein KQ254_RS10025 PF07690 Major Facilitator Superfamily KQ254_RS10040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ254_RS10040 PF03466 LysR substrate binding domain KQ254_RS10045 PF04284 Protein of unknown function (DUF441) KQ254_RS10055 PF00849 RNA pseudouridylate synthase KQ254_RS10055 PF01479 S4 domain KQ254_RS10070 PF00849 RNA pseudouridylate synthase KQ254_RS10070 PF01479 S4 domain KQ254_RS10075 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE KQ254_RS10080 PF08676 MutL C terminal dimerisation domain KQ254_RS10080 PF01119 DNA mismatch repair protein, C-terminal domain KQ254_RS10090 PF17209 Hfq protein KQ254_RS10100 PF00881 Nitroreductase family KQ254_RS10105 PF00149 Calcineurin-like phosphoesterase KQ254_RS10110 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KQ254_RS10115 PF00749 tRNA synthetases class I (E and Q), catalytic domain KQ254_RS10115 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain KQ254_RS10125 PF00117 Glutamine amidotransferase class-I KQ254_RS10125 PF00958 GMP synthase C terminal domain KQ254_RS10125 PF02540 NAD synthase KQ254_RS10130 PF05985 Ethanolamine ammonia-lyase light chain (EutC) KQ254_RS10135 PF06751 Ethanolamine ammonia lyase large subunit (EutB) KQ254_RS10140 PF13520 Amino acid permease KQ254_RS10145 PF00171 Aldehyde dehydrogenase family KQ254_RS10160 PF00465 Iron-containing alcohol dehydrogenase KQ254_RS10165 PF05970 PIF1-like helicase KQ254_RS10165 PF14493 Helix-turn-helix domain KQ254_RS10175 PF12833 Helix-turn-helix domain KQ254_RS10175 PF06445 GyrI-like small molecule binding domain KQ254_RS10180 PF02110 Hydroxyethylthiazole kinase family KQ254_RS10195 PF11940 Domain of unknown function (DUF3458) Ig-like fold KQ254_RS10195 PF17432 Domain of unknown function (DUF3458_C) ARM repeats KQ254_RS10195 PF01433 Peptidase family M1 domain KQ254_RS10205 PF13737 Transposase DDE domain KQ254_RS10215 PF13953 PapC C-terminal domain KQ254_RS10215 PF13954 PapC N-terminal domain KQ254_RS10215 PF00577 Outer membrane usher protein KQ254_RS10240 PF01817 Chorismate mutase type II KQ254_RS10245 PF01037 Lrp/AsnC ligand binding domain KQ254_RS10255 PF00440 Bacterial regulatory proteins, tetR family KQ254_RS10260 PF07715 TonB-dependent Receptor Plug Domain KQ254_RS10260 PF00593 TonB dependent receptor KQ254_RS10265 PF00924 Mechanosensitive ion channel KQ254_RS10295 PF07715 TonB-dependent Receptor Plug Domain KQ254_RS10295 PF00593 TonB dependent receptor KQ254_RS10315 PF00005 ABC transporter KQ254_RS10315 PF12848 ABC transporter KQ254_RS10320 PF00582 Universal stress protein family KQ254_RS10345 PF00689 Cation transporting ATPase, C-terminus KQ254_RS10345 PF00690 Cation transporter/ATPase, N-terminus KQ254_RS10350 PF02308 MgtC family KQ254_RS10355 PF03594 Benzoate membrane transport protein KQ254_RS10360 PF01037 Lrp/AsnC ligand binding domain KQ254_RS10365 PF01810 LysE type translocator KQ254_RS10370 PF00923 Transaldolase/Fructose-6-phosphate aldolase KQ254_RS10375 PF03466 LysR substrate binding domain KQ254_RS10375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ254_RS10385 PF00108 Thiolase, N-terminal domain KQ254_RS10385 PF02803 Thiolase, C-terminal domain KQ254_RS10395 PF01575 MaoC like domain KQ254_RS10400 PF00144 Beta-lactamase KQ254_RS10410 PF07690 Major Facilitator Superfamily KQ254_RS10415 PF12169 DNA polymerase III subunits gamma and tau domain III KQ254_RS10415 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding KQ254_RS10415 PF12170 DNA polymerase III tau subunit V interacting with alpha KQ254_RS10420 PF04185 Phosphoesterase family KQ254_RS10420 PF05506 Domain of unknown function (DUF756) KQ254_RS10425 PF03061 Thioesterase superfamily KQ254_RS10430 PF00465 Iron-containing alcohol dehydrogenase KQ254_RS10440 PF01451 Low molecular weight phosphotyrosine protein phosphatase KQ254_RS10445 PF01565 FAD binding domain KQ254_RS10445 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KQ254_RS10460 PF01645 Conserved region in glutamate synthase KQ254_RS10480 PF12832 MFS_1 like family KQ254_RS10490 PF02785 Biotin carboxylase C-terminal domain KQ254_RS10490 PF00289 Biotin carboxylase, N-terminal domain KQ254_RS10490 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KQ254_RS10495 PF00364 Biotin-requiring enzyme KQ254_RS10500 PF01220 Dehydroquinase class II KQ254_RS10505 PF11799 impB/mucB/samB family C-terminal domain KQ254_RS10505 PF13438 Domain of unknown function (DUF4113) KQ254_RS10505 PF00817 impB/mucB/samB family KQ254_RS10515 PF00005 ABC transporter KQ254_RS10520 PF00072 Response regulator receiver domain KQ254_RS10520 PF00486 Transcriptional regulatory protein, C terminal KQ254_RS10530 PF13806 Rieske-like [2Fe-2S] domain KQ254_RS10530 PF04324 BFD-like [2Fe-2S] binding domain KQ254_RS10530 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KQ254_RS10530 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KQ254_RS10530 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ254_RS10530 PF18267 Rubredoxin NAD+ reductase C-terminal domain KQ254_RS10535 PF04324 BFD-like [2Fe-2S] binding domain KQ254_RS10535 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KQ254_RS10535 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KQ254_RS10535 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ254_RS10535 PF18267 Rubredoxin NAD+ reductase C-terminal domain KQ254_RS10540 PF04324 BFD-like [2Fe-2S] binding domain KQ254_RS10540 PF01568 Molydopterin dinucleotide binding domain KQ254_RS10540 PF00384 Molybdopterin oxidoreductase KQ254_RS10540 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KQ254_RS10545 PF12804 MobA-like NTP transferase domain KQ254_RS10550 PF01568 Molydopterin dinucleotide binding domain KQ254_RS10550 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KQ254_RS10550 PF00384 Molybdopterin oxidoreductase KQ254_RS10555 PF06463 Molybdenum Cofactor Synthesis C KQ254_RS10555 PF04055 Radical SAM superfamily KQ254_RS10565 PF02391 MoaE protein KQ254_RS10570 PF00994 Probable molybdopterin binding domain KQ254_RS10570 PF01967 MoaC family KQ254_RS10575 PF03453 MoeA N-terminal region (domain I and II) KQ254_RS10575 PF03454 MoeA C-terminal region (domain IV) KQ254_RS10575 PF00994 Probable molybdopterin binding domain KQ254_RS10580 PF01638 HxlR-like helix-turn-helix KQ254_RS10585 PF00155 Aminotransferase class I and II KQ254_RS10585 PF00392 Bacterial regulatory proteins, gntR family KQ254_RS10590 PF00892 EamA-like transporter family KQ254_RS10610 PF02635 DsrE/DsrF-like family KQ254_RS10615 PF16363 GDP-mannose 4,6 dehydratase KQ254_RS10620 PF10415 Fumarase C C-terminus KQ254_RS10620 PF00206 Lyase KQ254_RS10640 PF01266 FAD dependent oxidoreductase KQ254_RS10650 PF02542 YgbB family KQ254_RS10660 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KQ254_RS10660 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KQ254_RS10670 PF13936 Helix-turn-helix domain KQ254_RS10670 PF00665 Integrase core domain KQ254_RS10680 PF02954 Bacterial regulatory protein, Fis family KQ254_RS10680 PF00072 Response regulator receiver domain KQ254_RS10680 PF00158 Sigma-54 interaction domain KQ254_RS10685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ254_RS10685 PF00989 PAS fold KQ254_RS10685 PF00512 His Kinase A (phospho-acceptor) domain KQ254_RS10690 PF18693 TRAM domain KQ254_RS10690 PF04055 Radical SAM superfamily KQ254_RS10690 PF00919 Uncharacterized protein family UPF0004 KQ254_RS10695 PF00696 Amino acid kinase family KQ254_RS10700 PF01765 Ribosome recycling factor KQ254_RS10705 PF01255 Putative undecaprenyl diphosphate synthase KQ254_RS10715 PF13288 DXP reductoisomerase C-terminal domain KQ254_RS10715 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KQ254_RS10715 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KQ254_RS10720 PF17820 PDZ domain KQ254_RS10720 PF02163 Peptidase family M50 KQ254_RS10720 PF13180 PDZ domain KQ254_RS10725 PF07244 Surface antigen variable number repeat KQ254_RS10725 PF01103 Surface antigen KQ254_RS10735 PF00132 Bacterial transferase hexapeptide (six repeats) KQ254_RS10735 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD KQ254_RS10740 PF07977 FabA-like domain KQ254_RS10745 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 KQ254_RS10745 PF00132 Bacterial transferase hexapeptide (six repeats) KQ254_RS10760 PF02631 RecX family KQ254_RS10765 PF00154 recA bacterial DNA recombination protein KQ254_RS10770 PF01479 S4 domain KQ254_RS10775 PF13419 Haloacid dehalogenase-like hydrolase KQ254_RS10800 PF01037 Lrp/AsnC ligand binding domain KQ254_RS10805 PF00266 Aminotransferase class-V KQ254_RS10810 PF00324 Amino acid permease KQ254_RS10825 PF13737 Transposase DDE domain KQ254_RS10830 PF05922 Peptidase inhibitor I9 KQ254_RS10830 PF00082 Subtilase family KQ254_RS10835 PF00916 Sulfate permease family KQ254_RS10835 PF01740 STAS domain KQ254_RS10840 PF02586 SOS response associated peptidase (SRAP) KQ254_RS10845 PF07995 Glucose / Sorbosone dehydrogenase KQ254_RS10855 PF00563 EAL domain KQ254_RS10855 PF00990 Diguanylate cyclase, GGDEF domain KQ254_RS10855 PF03707 Bacterial signalling protein N terminal repeat KQ254_RS10875 PF02378 Phosphotransferase system, EIIC KQ254_RS10875 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KQ254_RS10880 PF00294 pfkB family carbohydrate kinase KQ254_RS10885 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KQ254_RS10885 PF02896 PEP-utilising enzyme, TIM barrel domain KQ254_RS10885 PF00381 PTS HPr component phosphorylation site KQ254_RS10885 PF00391 PEP-utilising enzyme, mobile domain KQ254_RS10885 PF05524 PEP-utilising enzyme, N-terminal KQ254_RS10910 PF05525 Branched-chain amino acid transport protein KQ254_RS10915 PF00557 Metallopeptidase family M24 KQ254_RS10920 PF03466 LysR substrate binding domain KQ254_RS10920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ254_RS10930 PF00462 Glutaredoxin KQ254_RS10935 PF00202 Aminotransferase class-III KQ254_RS10940 PF00478 IMP dehydrogenase / GMP reductase domain KQ254_RS10940 PF00571 CBS domain KQ254_RS10965 PF02881 SRP54-type protein, helical bundle domain KQ254_RS10965 PF00448 SRP54-type protein, GTPase domain KQ254_RS10975 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) KQ254_RS10990 PF08173 Membrane bound YbgT-like protein KQ254_RS10995 PF02322 Cytochrome bd terminal oxidase subunit II KQ254_RS11000 PF01654 Cytochrome bd terminal oxidase subunit I KQ254_RS11015 PF07290 Protein of unknown function (DUF1449) KQ254_RS11025 PF00294 pfkB family carbohydrate kinase KQ254_RS11030 PF07715 TonB-dependent Receptor Plug Domain KQ254_RS11030 PF00593 TonB dependent receptor KQ254_RS11035 PF00675 Insulinase (Peptidase family M16) KQ254_RS11035 PF05193 Peptidase M16 inactive domain KQ254_RS11035 PF08367 Peptidase M16C associated KQ254_RS11040 PF02253 Phospholipase A1 KQ254_RS11045 PF02386 Cation transport protein KQ254_RS11050 PF02080 TrkA-C domain KQ254_RS11050 PF02254 TrkA-N domain KQ254_RS11055 PF00291 Pyridoxal-phosphate dependent enzyme KQ254_RS11055 PF00585 C-terminal regulatory domain of Threonine dehydratase KQ254_RS11060 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) KQ254_RS11075 PF01118 Semialdehyde dehydrogenase, NAD binding domain KQ254_RS11075 PF02774 Semialdehyde dehydrogenase, dimerisation domain KQ254_RS11085 PF02617 ATP-dependent Clp protease adaptor protein ClpS KQ254_RS11090 PF10431 C-terminal, D2-small domain, of ClpB protein KQ254_RS11090 PF17871 AAA lid domain KQ254_RS11090 PF02861 Clp amino terminal domain, pathogenicity island component KQ254_RS11090 PF00004 ATPase family associated with various cellular activities (AAA) KQ254_RS11090 PF07724 AAA domain (Cdc48 subfamily) KQ254_RS11095 PF02694 Uncharacterised BCR, YnfA/UPF0060 family KQ254_RS11100 PF00793 DAHP synthetase I family KQ254_RS11115 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KQ254_RS11115 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ254_RS11145 PF06418 CTP synthase N-terminus KQ254_RS11145 PF00117 Glutamine amidotransferase class-I KQ254_RS11150 PF00793 DAHP synthetase I family KQ254_RS11155 PF00113 Enolase, C-terminal TIM barrel domain KQ254_RS11155 PF03952 Enolase, N-terminal domain KQ254_RS11160 PF04239 Protein of unknown function (DUF421) KQ254_RS11165 PF04977 Septum formation initiator KQ254_RS11170 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KQ254_RS11175 PF01144 Coenzyme A transferase KQ254_RS11180 PF01144 Coenzyme A transferase KQ254_RS11185 PF00108 Thiolase, N-terminal domain KQ254_RS11185 PF02803 Thiolase, C-terminal domain KQ254_RS11190 PF10397 Adenylosuccinate lyase C-terminus KQ254_RS11190 PF00206 Lyase KQ254_RS11195 PF00561 alpha/beta hydrolase fold KQ254_RS11200 PF07690 Major Facilitator Superfamily KQ254_RS11205 PF02627 Carboxymuconolactone decarboxylase family KQ254_RS11210 PF00775 Dioxygenase KQ254_RS11210 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal KQ254_RS11215 PF00775 Dioxygenase KQ254_RS11220 PF01487 Type I 3-dehydroquinase KQ254_RS11225 PF05048 Periplasmic copper-binding protein (NosD) KQ254_RS11235 PF01011 PQQ enzyme repeat KQ254_RS11235 PF13360 PQQ-like domain KQ254_RS11245 PF04143 Sulphur transport KQ254_RS11255 PF00753 Metallo-beta-lactamase superfamily KQ254_RS11260 PF09339 IclR helix-turn-helix domain KQ254_RS11260 PF01614 Bacterial transcriptional regulator KQ254_RS11265 PF03466 LysR substrate binding domain KQ254_RS11265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ254_RS11270 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ254_RS11270 PF02770 Acyl-CoA dehydrogenase, middle domain KQ254_RS11270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ254_RS11285 PF00106 short chain dehydrogenase KQ254_RS11295 PF07690 Major Facilitator Superfamily KQ254_RS11305 PF01425 Amidase KQ254_RS11310 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KQ254_RS11325 PF00355 Rieske [2Fe-2S] domain KQ254_RS11325 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KQ254_RS11340 PF00175 Oxidoreductase NAD-binding domain KQ254_RS11340 PF00111 2Fe-2S iron-sulfur cluster binding domain KQ254_RS11345 PF01613 Flavin reductase like domain KQ254_RS11350 PF12833 Helix-turn-helix domain KQ254_RS11350 PF02311 AraC-like ligand binding domain KQ254_RS11355 PF01179 Copper amine oxidase, enzyme domain KQ254_RS11355 PF02728 Copper amine oxidase, N3 domain KQ254_RS11355 PF02727 Copper amine oxidase, N2 domain KQ254_RS11355 PF07833 Copper amine oxidase N-terminal domain KQ254_RS11365 PF00171 Aldehyde dehydrogenase family KQ254_RS11370 PF12146 Serine aminopeptidase, S33 KQ254_RS11375 PF00108 Thiolase, N-terminal domain KQ254_RS11375 PF02803 Thiolase, C-terminal domain KQ254_RS11380 PF01144 Coenzyme A transferase KQ254_RS11385 PF01144 Coenzyme A transferase KQ254_RS11390 PF00775 Dioxygenase KQ254_RS11390 PF04444 Catechol dioxygenase N terminus KQ254_RS11395 PF02426 Muconolactone delta-isomerase KQ254_RS11400 PF13378 Enolase C-terminal domain-like KQ254_RS11400 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KQ254_RS11405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ254_RS11405 PF03466 LysR substrate binding domain KQ254_RS11415 PF07729 FCD domain KQ254_RS11415 PF00392 Bacterial regulatory proteins, gntR family KQ254_RS11420 PF00920 Dehydratase family KQ254_RS11425 PF07690 Major Facilitator Superfamily KQ254_RS11435 PF00171 Aldehyde dehydrogenase family KQ254_RS11445 PF00561 alpha/beta hydrolase fold KQ254_RS11450 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KQ254_RS11450 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ254_RS11465 PF13411 MerR HTH family regulatory protein KQ254_RS11475 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ254_RS11485 PF12706 Beta-lactamase superfamily domain KQ254_RS11490 PF00440 Bacterial regulatory proteins, tetR family KQ254_RS11490 PF08359 YsiA-like protein, C-terminal region KQ254_RS11495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ254_RS11495 PF03466 LysR substrate binding domain KQ254_RS11510 PF00106 short chain dehydrogenase KQ254_RS11515 PF01575 MaoC like domain KQ254_RS11520 PF12806 Acetyl-CoA dehydrogenase C-terminal like KQ254_RS11520 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ254_RS11520 PF02770 Acyl-CoA dehydrogenase, middle domain KQ254_RS11520 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ254_RS11530 PF13193 AMP-binding enzyme C-terminal domain KQ254_RS11530 PF00501 AMP-binding enzyme KQ254_RS11585 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) KQ254_RS11590 PF07690 Major Facilitator Superfamily KQ254_RS11595 PF04909 Amidohydrolase KQ254_RS11605 PF07702 UTRA domain KQ254_RS11605 PF00392 Bacterial regulatory proteins, gntR family KQ254_RS11610 PF08450 SMP-30/Gluconolactonase/LRE-like region KQ254_RS11620 PF03466 LysR substrate binding domain KQ254_RS11620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ254_RS11640 PF04650 YSIRK type signal peptide KQ254_RS11640 PF10425 C-terminus of bacterial fibrinogen-binding adhesin KQ254_RS11640 PF00746 LPXTG cell wall anchor motif KQ254_RS11640 PF17961 Bacterial Ig domain KQ254_RS11640 PF17210 SdrD B-like domain KQ254_RS11645 PF13533 Biotin-lipoyl like KQ254_RS11660 PF00171 Aldehyde dehydrogenase family KQ254_RS11665 PF00920 Dehydratase family KQ254_RS11675 PF03466 LysR substrate binding domain KQ254_RS11675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ254_RS11680 PF01370 NAD dependent epimerase/dehydratase family KQ254_RS11685 PF07690 Major Facilitator Superfamily KQ254_RS11690 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KQ254_RS11690 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KQ254_RS11695 PF06719 AraC-type transcriptional regulator N-terminus KQ254_RS11695 PF12833 Helix-turn-helix domain KQ254_RS11710 PF00107 Zinc-binding dehydrogenase KQ254_RS11710 PF08240 Alcohol dehydrogenase GroES-like domain KQ254_RS11720 PF01032 FecCD transport family KQ254_RS11725 PF00005 ABC transporter KQ254_RS11745 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KQ254_RS11745 PF14572 Phosphoribosyl synthetase-associated domain KQ254_RS11750 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KQ254_RS11765 PF13533 Biotin-lipoyl like KQ254_RS11770 PF07690 Major Facilitator Superfamily KQ254_RS11795 PF01975 Survival protein SurE KQ254_RS11805 PF02824 TGS domain KQ254_RS11805 PF13291 ACT domain KQ254_RS11805 PF04607 Region found in RelA / SpoT proteins KQ254_RS11865 PF13936 Helix-turn-helix domain KQ254_RS11865 PF00665 Integrase core domain KQ254_RS11875 PF13737 Transposase DDE domain KQ254_RS11885 PF12146 Serine aminopeptidase, S33 KQ254_RS11890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ254_RS11890 PF03466 LysR substrate binding domain KQ254_RS11900 PF12146 Serine aminopeptidase, S33 KQ254_RS11905 PF02311 AraC-like ligand binding domain KQ254_RS11905 PF12833 Helix-turn-helix domain KQ254_RS11915 PF00512 His Kinase A (phospho-acceptor) domain KQ254_RS11915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ254_RS11915 PF00672 HAMP domain KQ254_RS11915 PF16527 Two-component sensor protein CpxA, periplasmic domain KQ254_RS11920 PF00072 Response regulator receiver domain KQ254_RS11920 PF00486 Transcriptional regulatory protein, C terminal KQ254_RS11925 PF00529 HlyD membrane-fusion protein of T1SS KQ254_RS11925 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KQ254_RS11930 PF00873 AcrB/AcrD/AcrF family KQ254_RS11935 PF17755 UvrA DNA-binding domain KQ254_RS11935 PF17760 UvrA interaction domain KQ254_RS11935 PF00005 ABC transporter KQ254_RS11945 PF16970 Type-1 fimbrial protein, A KQ254_RS11950 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain KQ254_RS11950 PF02753 Pili assembly chaperone PapD, C-terminal domain KQ254_RS11955 PF00577 Outer membrane usher protein KQ254_RS11955 PF13954 PapC N-terminal domain KQ254_RS11955 PF13953 PapC C-terminal domain KQ254_RS11960 PF00419 Fimbrial protein KQ254_RS11970 PF08240 Alcohol dehydrogenase GroES-like domain KQ254_RS11970 PF00107 Zinc-binding dehydrogenase KQ254_RS11980 PF00199 Catalase KQ254_RS11995 PF13091 PLD-like domain KQ254_RS12010 PF01244 Membrane dipeptidase (Peptidase family M19) KQ254_RS12015 PF04055 Radical SAM superfamily KQ254_RS12015 PF13186 Iron-sulfur cluster-binding domain KQ254_RS12020 PF05402 Coenzyme PQQ synthesis protein D (PqqD) KQ254_RS12025 PF03070 TENA/THI-4/PQQC family KQ254_RS12030 PF12706 Beta-lactamase superfamily domain KQ254_RS12035 PF08042 PqqA family KQ254_RS12040 PF17941 Polyphosphate kinase C-terminal domain 1 KQ254_RS12040 PF13089 Polyphosphate kinase N-terminal domain KQ254_RS12040 PF02503 Polyphosphate kinase middle domain KQ254_RS12040 PF13090 Polyphosphate kinase C-terminal domain 2 KQ254_RS12045 PF00149 Calcineurin-like phosphoesterase KQ254_RS12055 PF00550 Phosphopantetheine attachment site KQ254_RS12055 PF00857 Isochorismatase family KQ254_RS12060 PF00106 short chain dehydrogenase KQ254_RS12065 PF03459 TOBE domain KQ254_RS12065 PF00005 ABC transporter KQ254_RS12070 PF00528 Binding-protein-dependent transport system inner membrane component KQ254_RS12080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ254_RS12080 PF03459 TOBE domain KQ254_RS12085 PF00355 Rieske [2Fe-2S] domain KQ254_RS12085 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KQ254_RS12090 PF00866 Ring hydroxylating beta subunit KQ254_RS12095 PF00970 Oxidoreductase FAD-binding domain KQ254_RS12095 PF00111 2Fe-2S iron-sulfur cluster binding domain KQ254_RS12095 PF00175 Oxidoreductase NAD-binding domain KQ254_RS12100 PF14525 AraC-binding-like domain KQ254_RS12100 PF12833 Helix-turn-helix domain KQ254_RS12110 PF01613 Flavin reductase like domain KQ254_RS12125 PF01738 Dienelactone hydrolase family KQ254_RS12130 PF07690 Major Facilitator Superfamily KQ254_RS12135 PF12833 Helix-turn-helix domain KQ254_RS12135 PF06719 AraC-type transcriptional regulator N-terminus KQ254_RS12155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ254_RS12155 PF03466 LysR substrate binding domain KQ254_RS12160 PF01144 Coenzyme A transferase KQ254_RS12165 PF01144 Coenzyme A transferase KQ254_RS12170 PF02667 Short chain fatty acid transporter KQ254_RS12175 PF00108 Thiolase, N-terminal domain KQ254_RS12175 PF02803 Thiolase, C-terminal domain KQ254_RS12180 PF03466 LysR substrate binding domain KQ254_RS12180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ254_RS12185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ254_RS12185 PF03466 LysR substrate binding domain KQ254_RS12200 PF00206 Lyase KQ254_RS12200 PF10415 Fumarase C C-terminus KQ254_RS12205 PF00593 TonB dependent receptor KQ254_RS12205 PF07715 TonB-dependent Receptor Plug Domain KQ254_RS12210 PF00083 Sugar (and other) transporter KQ254_RS12225 PF00005 ABC transporter KQ254_RS12230 PF00528 Binding-protein-dependent transport system inner membrane component KQ254_RS12235 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KQ254_RS12250 PF07702 UTRA domain KQ254_RS12250 PF00392 Bacterial regulatory proteins, gntR family KQ254_RS12255 PF02417 Chromate transporter KQ254_RS12260 PF02525 Flavodoxin-like fold KQ254_RS12265 PF01638 HxlR-like helix-turn-helix KQ254_RS12270 PF06445 GyrI-like small molecule binding domain KQ254_RS12270 PF12833 Helix-turn-helix domain KQ254_RS12285 PF01925 Sulfite exporter TauE/SafE KQ254_RS12300 PF00753 Metallo-beta-lactamase superfamily KQ254_RS12300 PF04273 Putative phosphatase (DUF442) KQ254_RS12305 PF00072 Response regulator receiver domain KQ254_RS12305 PF00158 Sigma-54 interaction domain KQ254_RS12305 PF02954 Bacterial regulatory protein, Fis family KQ254_RS12310 PF01062 Bestrophin, RFP-TM, chloride channel KQ254_RS12315 PF08240 Alcohol dehydrogenase GroES-like domain KQ254_RS12315 PF00107 Zinc-binding dehydrogenase KQ254_RS12320 PF00106 short chain dehydrogenase KQ254_RS12325 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ254_RS12325 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KQ254_RS12330 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KQ254_RS12330 PF00364 Biotin-requiring enzyme KQ254_RS12330 PF02817 e3 binding domain KQ254_RS12335 PF02779 Transketolase, pyrimidine binding domain KQ254_RS12335 PF02780 Transketolase, C-terminal domain KQ254_RS12340 PF00676 Dehydrogenase E1 component KQ254_RS12345 PF04055 Radical SAM superfamily KQ254_RS12360 PF13936 Helix-turn-helix domain KQ254_RS12360 PF00665 Integrase core domain KQ254_RS12370 PF08448 PAS fold KQ254_RS12370 PF00990 Diguanylate cyclase, GGDEF domain KQ254_RS12375 PF01264 Chorismate synthase KQ254_RS12380 PF05175 Methyltransferase small domain KQ254_RS12385 PF00291 Pyridoxal-phosphate dependent enzyme KQ254_RS12395 PF01434 Peptidase family M41 KQ254_RS12395 PF17862 AAA+ lid domain KQ254_RS12395 PF00004 ATPase family associated with various cellular activities (AAA) KQ254_RS12405 PF05166 YcgL domain KQ254_RS12425 PF01612 3'-5' exonuclease KQ254_RS12425 PF00570 HRDC domain KQ254_RS12430 PF02132 RecR protein KQ254_RS12430 PF13662 Toprim domain KQ254_RS12435 PF02575 YbaB/EbfC DNA-binding family KQ254_RS12445 PF01053 Cys/Met metabolism PLP-dependent enzyme KQ254_RS12450 PF00561 alpha/beta hydrolase fold KQ254_RS12455 PF08241 Methyltransferase domain KQ254_RS12485 PF01230 HIT domain KQ254_RS12520 PF00005 ABC transporter KQ254_RS12525 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KQ254_RS12535 PF02684 Lipid-A-disaccharide synthetase KQ254_RS12540 PF07715 TonB-dependent Receptor Plug Domain KQ254_RS12540 PF00593 TonB dependent receptor KQ254_RS12560 PF01925 Sulfite exporter TauE/SafE KQ254_RS12565 PF00793 DAHP synthetase I family KQ254_RS12570 PF02654 Cobalamin-5-phosphate synthase KQ254_RS12585 PF02277 Phosphoribosyltransferase KQ254_RS12590 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase KQ254_RS12600 PF13419 Haloacid dehalogenase-like hydrolase KQ254_RS12625 PF00593 TonB dependent receptor KQ254_RS12625 PF07715 TonB-dependent Receptor Plug Domain KQ254_RS12630 PF03737 Aldolase/RraA KQ254_RS12640 PF06276 Ferric iron reductase FhuF-like transporter KQ254_RS12640 PF04183 IucA / IucC family KQ254_RS12645 PF04183 IucA / IucC family KQ254_RS12645 PF06276 Ferric iron reductase FhuF-like transporter KQ254_RS12650 PF07690 Major Facilitator Superfamily KQ254_RS12655 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) KQ254_RS12660 PF06276 Ferric iron reductase FhuF-like transporter KQ254_RS12660 PF04183 IucA / IucC family KQ254_RS12665 PF04073 Aminoacyl-tRNA editing domain KQ254_RS12675 PF03109 ABC1 family KQ254_RS12680 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ254_RS12680 PF02770 Acyl-CoA dehydrogenase, middle domain KQ254_RS12680 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ254_RS12685 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ254_RS12685 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ254_RS12685 PF02770 Acyl-CoA dehydrogenase, middle domain KQ254_RS12690 PF00487 Fatty acid desaturase KQ254_RS12695 PF12833 Helix-turn-helix domain KQ254_RS12695 PF12852 Cupin KQ254_RS12700 PF09312 SurA N-terminal domain KQ254_RS12700 PF00639 PPIC-type PPIASE domain KQ254_RS12705 PF00216 Bacterial DNA-binding protein KQ254_RS12720 PF02082 Transcriptional regulator KQ254_RS12725 PF00266 Aminotransferase class-V KQ254_RS12730 PF01592 NifU-like N terminal domain KQ254_RS12735 PF01521 Iron-sulphur cluster biosynthesis KQ254_RS12740 PF00226 DnaJ domain KQ254_RS12740 PF07743 HSCB C-terminal oligomerisation domain KQ254_RS12745 PF00012 Hsp70 protein KQ254_RS12750 PF00111 2Fe-2S iron-sulfur cluster binding domain KQ254_RS12755 PF00211 Adenylate and Guanylate cyclase catalytic domain KQ254_RS12765 PF17757 UvrB interaction domain KQ254_RS12765 PF00270 DEAD/DEAH box helicase KQ254_RS12765 PF02559 CarD-like/TRCF domain KQ254_RS12765 PF03461 TRCF domain KQ254_RS12765 PF00271 Helicase conserved C-terminal domain KQ254_RS12785 PF03737 Aldolase/RraA KQ254_RS12790 PF13460 NAD(P)H-binding KQ254_RS12795 PF01649 Ribosomal protein S20 KQ254_RS12805 PF00459 Inositol monophosphatase family KQ254_RS12820 PF00005 ABC transporter KQ254_RS12820 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KQ254_RS12825 PF00528 Binding-protein-dependent transport system inner membrane component KQ254_RS12830 PF00528 Binding-protein-dependent transport system inner membrane component KQ254_RS12835 PF01432 Peptidase family M3 KQ254_RS12850 PF00593 TonB dependent receptor KQ254_RS12850 PF07715 TonB-dependent Receptor Plug Domain KQ254_RS12855 PF03544 Gram-negative bacterial TonB protein C-terminal KQ254_RS12860 PF01618 MotA/TolQ/ExbB proton channel family KQ254_RS12865 PF02472 Biopolymer transport protein ExbD/TolR KQ254_RS12870 PF02472 Biopolymer transport protein ExbD/TolR KQ254_RS12880 PF01274 Malate synthase KQ254_RS12885 PF03969 AFG1-like ATPase KQ254_RS12895 PF00743 Flavin-binding monooxygenase-like KQ254_RS12905 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KQ254_RS12915 PF00216 Bacterial DNA-binding protein KQ254_RS12920 PF00575 S1 RNA binding domain KQ254_RS12925 PF02224 Cytidylate kinase KQ254_RS12935 PF14437 MafB19-like deaminase KQ254_RS12945 PF03167 Uracil DNA glycosylase superfamily KQ254_RS12955 PF03934 Type II secretion system (T2SS), protein K KQ254_RS12960 PF07963 Prokaryotic N-terminal methylation motif KQ254_RS12960 PF11612 Type II secretion system (T2SS), protein J KQ254_RS12965 PF07963 Prokaryotic N-terminal methylation motif KQ254_RS12965 PF02501 Type II secretion system (T2SS), protein I KQ254_RS12980 PF01026 TatD related DNase KQ254_RS12990 PF09115 DNA polymerase III, delta subunit, C terminal KQ254_RS12995 PF02348 Cytidylyltransferase KQ254_RS13000 PF02606 Tetraacyldisaccharide-1-P 4'-kinase KQ254_RS13005 PF00664 ABC transporter transmembrane region KQ254_RS13005 PF00005 ABC transporter KQ254_RS13015 PF01618 MotA/TolQ/ExbB proton channel family KQ254_RS13020 PF17762 HTH domain found in ParB protein KQ254_RS13020 PF02195 ParB-like nuclease domain KQ254_RS13025 PF13614 AAA domain KQ254_RS13030 PF02527 rRNA small subunit methyltransferase G KQ254_RS13035 PF00483 Nucleotidyl transferase KQ254_RS13040 PF01636 Phosphotransferase enzyme family KQ254_RS13045 PF04453 LPS transport system D KQ254_RS13045 PF03968 OstA-like protein KQ254_RS13050 PF00639 PPIC-type PPIASE domain KQ254_RS13050 PF09312 SurA N-terminal domain KQ254_RS13055 PF01116 Fructose-bisphosphate aldolase class-II KQ254_RS13065 PF00162 Phosphoglycerate kinase KQ254_RS13075 PF02545 Maf-like protein KQ254_RS13080 PF08007 Cupin superfamily protein KQ254_RS13105 PF00375 Sodium:dicarboxylate symporter family KQ254_RS13110 PF06912 Protein of unknown function (DUF1275) KQ254_RS13115 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) KQ254_RS13120 PF00664 ABC transporter transmembrane region KQ254_RS13120 PF00005 ABC transporter KQ254_RS13130 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term KQ254_RS13130 PF12833 Helix-turn-helix domain KQ254_RS13135 PF01597 Glycine cleavage H-protein KQ254_RS13140 PF02146 Sir2 family KQ254_RS13145 PF00474 Sodium:solute symporter family KQ254_RS13150 PF01037 Lrp/AsnC ligand binding domain KQ254_RS13155 PF01619 Proline dehydrogenase KQ254_RS13155 PF14850 DNA-binding domain of Proline dehydrogenase KQ254_RS13155 PF18327 Proline utilization A proline dehydrogenase N-terminal domain KQ254_RS13155 PF00171 Aldehyde dehydrogenase family KQ254_RS13160 PF04229 GrpB protein KQ254_RS13165 PF05958 tRNA (Uracil-5-)-methyltransferase KQ254_RS13175 PF09992 Phosphodiester glycosidase KQ254_RS13185 PF04264 YceI-like domain KQ254_RS13195 PF02779 Transketolase, pyrimidine binding domain KQ254_RS13195 PF00456 Transketolase, thiamine diphosphate binding domain KQ254_RS13195 PF02780 Transketolase, C-terminal domain KQ254_RS13200 PF02773 S-adenosylmethionine synthetase, C-terminal domain KQ254_RS13200 PF02772 S-adenosylmethionine synthetase, central domain KQ254_RS13200 PF00438 S-adenosylmethionine synthetase, N-terminal domain KQ254_RS13220 PF00905 Penicillin binding protein transpeptidase domain KQ254_RS13235 PF02075 Crossover junction endodeoxyribonuclease RuvC KQ254_RS13240 PF01256 Carbohydrate kinase KQ254_RS13240 PF03853 YjeF-related protein N-terminus KQ254_RS13245 PF08331 Domain of unknown function (DUF1730) KQ254_RS13250 PF06968 Biotin and Thiamin Synthesis associated domain KQ254_RS13250 PF04055 Radical SAM superfamily KQ254_RS13265 PF16970 Type-1 fimbrial protein, A KQ254_RS13270 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain KQ254_RS13270 PF02753 Pili assembly chaperone PapD, C-terminal domain KQ254_RS13275 PF13953 PapC C-terminal domain KQ254_RS13275 PF00577 Outer membrane usher protein KQ254_RS13275 PF13954 PapC N-terminal domain KQ254_RS13295 PF00892 EamA-like transporter family KQ254_RS13305 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin KQ254_RS13315 PF03466 LysR substrate binding domain KQ254_RS13315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ254_RS13355 PF01709 Transcriptional regulator KQ254_RS13360 PF01037 Lrp/AsnC ligand binding domain KQ254_RS13370 PF00005 ABC transporter KQ254_RS13375 PF00528 Binding-protein-dependent transport system inner membrane component KQ254_RS13380 PF00528 Binding-protein-dependent transport system inner membrane component KQ254_RS13395 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ254_RS13395 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KQ254_RS13405 PF00296 Luciferase-like monooxygenase KQ254_RS13410 PF03180 NLPA lipoprotein KQ254_RS13415 PF03180 NLPA lipoprotein KQ254_RS13420 PF09383 NIL domain KQ254_RS13420 PF00005 ABC transporter KQ254_RS13425 PF00528 Binding-protein-dependent transport system inner membrane component KQ254_RS13430 PF06071 Protein of unknown function (DUF933) KQ254_RS13430 PF01926 50S ribosome-binding GTPase KQ254_RS13455 PF03591 AzlC protein KQ254_RS13460 PF05437 Branched-chain amino acid transport protein (AzlD) KQ254_RS13470 PF02222 ATP-grasp domain KQ254_RS13475 PF08335 GlnD PII-uridylyltransferase KQ254_RS13475 PF01966 HD domain KQ254_RS13475 PF01909 Nucleotidyltransferase domain KQ254_RS13480 PF00155 Aminotransferase class I and II KQ254_RS13490 PF12852 Cupin KQ254_RS13490 PF12833 Helix-turn-helix domain KQ254_RS13495 PF00255 Glutathione peroxidase KQ254_RS13500 PF01641 SelR domain KQ254_RS13505 PF00155 Aminotransferase class I and II KQ254_RS13510 PF00375 Sodium:dicarboxylate symporter family KQ254_RS13515 PF17763 Glutaminase/Asparaginase C-terminal domain KQ254_RS13515 PF00710 Asparaginase, N-terminal KQ254_RS13520 PF07733 Bacterial DNA polymerase III alpha NTPase domain KQ254_RS13520 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KQ254_RS13520 PF14579 Helix-hairpin-helix motif KQ254_RS13520 PF02811 PHP domain KQ254_RS13520 PF01336 OB-fold nucleic acid binding domain KQ254_RS13525 PF00588 SpoU rRNA Methylase family KQ254_RS13530 PF00132 Bacterial transferase hexapeptide (six repeats) KQ254_RS13545 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ254_RS13545 PF13192 Thioredoxin domain KQ254_RS13560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ254_RS13560 PF03466 LysR substrate binding domain KQ254_RS13565 PF01758 Sodium Bile acid symporter family KQ254_RS13570 PF01022 Bacterial regulatory protein, arsR family KQ254_RS13585 PF13382 Adenine deaminase C-terminal domain KQ254_RS13585 PF01979 Amidohydrolase family KQ254_RS13595 PF03466 LysR substrate binding domain KQ254_RS13595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ254_RS13605 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin KQ254_RS13610 PF01177 Asp/Glu/Hydantoin racemase KQ254_RS13615 PF02668 Taurine catabolism dioxygenase TauD, TfdA family KQ254_RS13620 PF00528 Binding-protein-dependent transport system inner membrane component KQ254_RS13625 PF00005 ABC transporter KQ254_RS13630 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KQ254_RS13640 PF00083 Sugar (and other) transporter KQ254_RS13645 PF00296 Luciferase-like monooxygenase KQ254_RS13650 PF13737 Transposase DDE domain KQ254_RS13655 PF02770 Acyl-CoA dehydrogenase, middle domain KQ254_RS13655 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KQ254_RS13655 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ254_RS13665 PF01654 Cytochrome bd terminal oxidase subunit I KQ254_RS13670 PF02322 Cytochrome bd terminal oxidase subunit II KQ254_RS13680 PF00155 Aminotransferase class I and II KQ254_RS13680 PF00392 Bacterial regulatory proteins, gntR family KQ254_RS13685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ254_RS13685 PF03466 LysR substrate binding domain KQ254_RS13700 PF00698 Acyl transferase domain KQ254_RS13705 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG KQ254_RS13715 PF01039 Carboxyl transferase domain KQ254_RS13720 PF06857 Malonate decarboxylase delta subunit (MdcD) KQ254_RS13725 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase KQ254_RS13730 PF16957 Malonate decarboxylase, alpha subunit, transporter KQ254_RS13735 PF03466 LysR substrate binding domain KQ254_RS13735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ254_RS13745 PF07690 Major Facilitator Superfamily KQ254_RS13760 PF00392 Bacterial regulatory proteins, gntR family KQ254_RS13760 PF00155 Aminotransferase class I and II KQ254_RS13765 PF04172 LrgB-like family KQ254_RS13770 PF03788 LrgA family KQ254_RS13775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ254_RS13775 PF03466 LysR substrate binding domain KQ254_RS13780 PF02798 Glutathione S-transferase, N-terminal domain KQ254_RS13780 PF14834 Glutathione S-transferase, C-terminal domain KQ254_RS13785 PF02798 Glutathione S-transferase, N-terminal domain KQ254_RS13790 PF03466 LysR substrate binding domain KQ254_RS13790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ254_RS13800 PF00581 Rhodanese-like domain KQ254_RS13805 PF00132 Bacterial transferase hexapeptide (six repeats) KQ254_RS13815 PF00266 Aminotransferase class-V KQ254_RS13825 PF01810 LysE type translocator KQ254_RS13830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ254_RS13830 PF03466 LysR substrate binding domain KQ254_RS13840 PF00497 Bacterial extracellular solute-binding proteins, family 3 KQ254_RS13845 PF00497 Bacterial extracellular solute-binding proteins, family 3 KQ254_RS13850 PF00005 ABC transporter KQ254_RS13855 PF00528 Binding-protein-dependent transport system inner membrane component KQ254_RS13860 PF00528 Binding-protein-dependent transport system inner membrane component KQ254_RS13875 PF00072 Response regulator receiver domain KQ254_RS13880 PF09308 LuxQ, periplasmic KQ254_RS13880 PF00072 Response regulator receiver domain KQ254_RS13880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ254_RS13880 PF00512 His Kinase A (phospho-acceptor) domain KQ254_RS13890 PF01037 Lrp/AsnC ligand binding domain KQ254_RS13890 PF13404 AsnC-type helix-turn-helix domain KQ254_RS13900 PF00717 Peptidase S24-like KQ254_RS13915 PF13737 Transposase DDE domain KQ254_RS13930 PF00199 Catalase KQ254_RS13930 PF06628 Catalase-related immune-responsive KQ254_RS13930 PF18011 C-terminal domain found in long catalases KQ254_RS13940 PF00994 Probable molybdopterin binding domain KQ254_RS13940 PF02464 Competence-damaged protein KQ254_RS13940 PF18146 Damage-inducible protein CinA KH domain KQ254_RS13975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ254_RS13975 PF03466 LysR substrate binding domain KQ254_RS13995 PF00501 AMP-binding enzyme KQ254_RS13995 PF13193 AMP-binding enzyme C-terminal domain KQ254_RS14000 PF00440 Bacterial regulatory proteins, tetR family KQ254_RS14005 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ254_RS14005 PF02770 Acyl-CoA dehydrogenase, middle domain KQ254_RS14005 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ254_RS14010 PF01039 Carboxyl transferase domain KQ254_RS14015 PF00378 Enoyl-CoA hydratase/isomerase KQ254_RS14020 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KQ254_RS14020 PF00364 Biotin-requiring enzyme KQ254_RS14020 PF00289 Biotin carboxylase, N-terminal domain KQ254_RS14020 PF02785 Biotin carboxylase C-terminal domain KQ254_RS14020 PF18140 Propionyl-coenzyme A carboxylase BT domain KQ254_RS14025 PF00682 HMGL-like KQ254_RS14030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ254_RS14030 PF03466 LysR substrate binding domain KQ254_RS14045 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ254_RS14045 PF02770 Acyl-CoA dehydrogenase, middle domain KQ254_RS14045 PF12806 Acetyl-CoA dehydrogenase C-terminal like KQ254_RS14045 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ254_RS14055 PF07690 Major Facilitator Superfamily KQ254_RS14065 PF01144 Coenzyme A transferase KQ254_RS14070 PF01144 Coenzyme A transferase KQ254_RS14075 PF07690 Major Facilitator Superfamily KQ254_RS14080 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ254_RS14080 PF02770 Acyl-CoA dehydrogenase, middle domain KQ254_RS14080 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ254_RS14085 PF00378 Enoyl-CoA hydratase/isomerase KQ254_RS14095 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KQ254_RS14095 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KQ254_RS14095 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain KQ254_RS14100 PF00108 Thiolase, N-terminal domain KQ254_RS14100 PF02803 Thiolase, C-terminal domain KQ254_RS14105 PF09339 IclR helix-turn-helix domain KQ254_RS14110 PF07690 Major Facilitator Superfamily KQ254_RS14115 PF03060 Nitronate monooxygenase KQ254_RS14120 PF00378 Enoyl-CoA hydratase/isomerase KQ254_RS14125 PF09339 IclR helix-turn-helix domain KQ254_RS14130 PF02515 CoA-transferase family III KQ254_RS14135 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ254_RS14135 PF02770 Acyl-CoA dehydrogenase, middle domain KQ254_RS14135 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ254_RS14140 PF07690 Major Facilitator Superfamily KQ254_RS14145 PF13419 Haloacid dehalogenase-like hydrolase KQ254_RS14150 PF00266 Aminotransferase class-V KQ254_RS14155 PF01266 FAD dependent oxidoreductase KQ254_RS14165 PF08402 TOBE domain KQ254_RS14165 PF00005 ABC transporter KQ254_RS14175 PF00392 Bacterial regulatory proteins, gntR family KQ254_RS14175 PF07702 UTRA domain KQ254_RS14180 PF01494 FAD binding domain KQ254_RS14185 PF09339 IclR helix-turn-helix domain KQ254_RS14185 PF01614 Bacterial transcriptional regulator KQ254_RS14190 PF02525 Flavodoxin-like fold KQ254_RS14195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ254_RS14195 PF03466 LysR substrate binding domain KQ254_RS14200 PF02627 Carboxymuconolactone decarboxylase family KQ254_RS14205 PF00171 Aldehyde dehydrogenase family KQ254_RS14215 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin KQ254_RS14225 PF00171 Aldehyde dehydrogenase family KQ254_RS14230 PF00296 Luciferase-like monooxygenase KQ254_RS14235 PF01613 Flavin reductase like domain KQ254_RS14240 PF12697 Alpha/beta hydrolase family KQ254_RS14260 PF01292 Prokaryotic cytochrome b561 KQ254_RS14265 PF00199 Catalase KQ254_RS14300 PF03061 Thioesterase superfamily KQ254_RS14305 PF00132 Bacterial transferase hexapeptide (six repeats) KQ254_RS14310 PF07848 PaaX-like protein KQ254_RS14310 PF08223 PaaX-like protein C-terminal domain KQ254_RS14315 PF14535 AMP-binding enzyme C-terminal domain KQ254_RS14315 PF00501 AMP-binding enzyme KQ254_RS14320 PF00108 Thiolase, N-terminal domain KQ254_RS14320 PF02803 Thiolase, C-terminal domain KQ254_RS14325 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain KQ254_RS14325 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KQ254_RS14325 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KQ254_RS14330 PF00378 Enoyl-CoA hydratase/isomerase KQ254_RS14335 PF00378 Enoyl-CoA hydratase/isomerase KQ254_RS14340 PF00111 2Fe-2S iron-sulfur cluster binding domain KQ254_RS14340 PF00175 Oxidoreductase NAD-binding domain KQ254_RS14340 PF00970 Oxidoreductase FAD-binding domain KQ254_RS14345 PF01883 Iron-sulfur cluster assembly protein KQ254_RS14350 PF05138 Phenylacetic acid catabolic protein KQ254_RS14355 PF06243 Phenylacetic acid degradation B KQ254_RS14360 PF05138 Phenylacetic acid catabolic protein KQ254_RS14365 PF01575 MaoC like domain KQ254_RS14365 PF00171 Aldehyde dehydrogenase family KQ254_RS14370 PF03313 Serine dehydratase alpha chain KQ254_RS14370 PF03315 Serine dehydratase beta chain KQ254_RS14375 PF13520 Amino acid permease KQ254_RS14380 PF00171 Aldehyde dehydrogenase family KQ254_RS14385 PF00083 Sugar (and other) transporter KQ254_RS14395 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ254_RS14395 PF04324 BFD-like [2Fe-2S] binding domain KQ254_RS14405 PF01266 FAD dependent oxidoreductase KQ254_RS14410 PF05544 Proline racemase KQ254_RS14415 PF00392 Bacterial regulatory proteins, gntR family KQ254_RS14425 PF00701 Dihydrodipicolinate synthetase family KQ254_RS14435 PF09278 MerR, DNA binding KQ254_RS14435 PF00376 MerR family regulatory protein KQ254_RS14445 PF02677 Epoxyqueuosine reductase QueH KQ254_RS14460 PF07690 Major Facilitator Superfamily KQ254_RS14465 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KQ254_RS14475 PF03466 LysR substrate binding domain KQ254_RS14475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ254_RS14495 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE KQ254_RS14500 PF06812 ImpA, N-terminal, type VI secretion system KQ254_RS14505 PF10431 C-terminal, D2-small domain, of ClpB protein KQ254_RS14505 PF17871 AAA lid domain KQ254_RS14505 PF00004 ATPase family associated with various cellular activities (AAA) KQ254_RS14505 PF07724 AAA domain (Cdc48 subfamily) KQ254_RS14520 PF00691 OmpA family KQ254_RS14520 PF01389 OmpA-like transmembrane domain KQ254_RS14530 PF06761 Intracellular multiplication and human macrophage-killing KQ254_RS14530 PF06744 Type VI secretion protein IcmF C-terminal KQ254_RS14530 PF14331 ImcF-related N-terminal domain KQ254_RS14545 PF05947 Type VI secretion system, TssF KQ254_RS14560 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath KQ254_RS14575 PF13737 Transposase DDE domain KQ254_RS14595 PF00005 ABC transporter KQ254_RS14605 PF01425 Amidase KQ254_RS14610 PF01402 Ribbon-helix-helix protein, copG family KQ254_RS14610 PF08753 NikR C terminal nickel binding domain KQ254_RS14620 PF01638 HxlR-like helix-turn-helix KQ254_RS14625 PF02525 Flavodoxin-like fold KQ254_RS14630 PF02785 Biotin carboxylase C-terminal domain KQ254_RS14630 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KQ254_RS14630 PF00289 Biotin carboxylase, N-terminal domain KQ254_RS14645 PF08240 Alcohol dehydrogenase GroES-like domain KQ254_RS14645 PF00107 Zinc-binding dehydrogenase KQ254_RS14645 PF13823 Alcohol dehydrogenase GroES-associated KQ254_RS14655 PF00440 Bacterial regulatory proteins, tetR family KQ254_RS14670 PF13936 Helix-turn-helix domain KQ254_RS14670 PF00665 Integrase core domain KQ254_RS14680 PF00289 Biotin carboxylase, N-terminal domain KQ254_RS14680 PF02785 Biotin carboxylase C-terminal domain KQ254_RS14680 PF00364 Biotin-requiring enzyme KQ254_RS14680 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KQ254_RS14690 PF07286 Protein of unknown function (DUF1445) KQ254_RS14695 PF03746 LamB/YcsF family KQ254_RS14700 PF01566 Natural resistance-associated macrophage protein KQ254_RS14705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ254_RS14705 PF03466 LysR substrate binding domain KQ254_RS14745 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KQ254_RS14745 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KQ254_RS14765 PF07690 Major Facilitator Superfamily KQ254_RS14780 PF03279 Bacterial lipid A biosynthesis acyltransferase KQ254_RS14785 PF00563 EAL domain KQ254_RS14785 PF03707 Bacterial signalling protein N terminal repeat KQ254_RS14785 PF00990 Diguanylate cyclase, GGDEF domain KQ254_RS14790 PF00892 EamA-like transporter family KQ254_RS14795 PF01037 Lrp/AsnC ligand binding domain KQ254_RS14800 PF05192 MutS domain III KQ254_RS14800 PF00488 MutS domain V KQ254_RS14800 PF05190 MutS family domain IV KQ254_RS14800 PF01624 MutS domain I KQ254_RS14800 PF05188 MutS domain II KQ254_RS14810 PF00037 4Fe-4S binding domain KQ254_RS14810 PF11953 Domain of unknown function (DUF3470) KQ254_RS14820 PF01596 O-methyltransferase KQ254_RS14830 PF00132 Bacterial transferase hexapeptide (six repeats) KQ254_RS14835 PF01205 Uncharacterized protein family UPF0029 KQ254_RS14845 PF03412 Peptidase C39 family KQ254_RS14845 PF00005 ABC transporter KQ254_RS14845 PF00664 ABC transporter transmembrane region KQ254_RS14850 PF02321 Outer membrane efflux protein KQ254_RS14855 PF00005 ABC transporter KQ254_RS14855 PF12399 Branched-chain amino acid ATP-binding cassette transporter KQ254_RS14860 PF03968 OstA-like protein KQ254_RS14875 PF00571 CBS domain KQ254_RS14875 PF01380 SIS domain KQ254_RS14880 PF09190 DALR domain KQ254_RS14880 PF01406 tRNA synthetases class I (C) catalytic domain KQ254_RS14910 PF01638 HxlR-like helix-turn-helix KQ254_RS14915 PF07690 Major Facilitator Superfamily KQ254_RS14940 PF14748 Pyrroline-5-carboxylate reductase dimerisation KQ254_RS14940 PF03807 NADP oxidoreductase coenzyme F420-dependent KQ254_RS14950 PF00313 'Cold-shock' DNA-binding domain KQ254_RS14955 PF01810 LysE type translocator KQ254_RS14985 PF02601 Exonuclease VII, large subunit KQ254_RS14985 PF13742 OB-fold nucleic acid binding domain KQ254_RS15020 PF09278 MerR, DNA binding KQ254_RS15020 PF00376 MerR family regulatory protein KQ254_RS15025 PF00403 Heavy-metal-associated domain KQ254_RS15030 PF00403 Heavy-metal-associated domain KQ254_RS15035 PF03466 LysR substrate binding domain KQ254_RS15035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ254_RS15045 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KQ254_RS15045 PF00355 Rieske [2Fe-2S] domain KQ254_RS15055 PF00175 Oxidoreductase NAD-binding domain KQ254_RS15055 PF00970 Oxidoreductase FAD-binding domain KQ254_RS15055 PF00111 2Fe-2S iron-sulfur cluster binding domain KQ254_RS15060 PF00106 short chain dehydrogenase KQ254_RS15065 PF03594 Benzoate membrane transport protein KQ254_RS15070 PF07690 Major Facilitator Superfamily KQ254_RS15080 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KQ254_RS15080 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KQ254_RS15085 PF00271 Helicase conserved C-terminal domain KQ254_RS15085 PF04408 Helicase associated domain (HA2) KQ254_RS15085 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold KQ254_RS15085 PF00270 DEAD/DEAH box helicase KQ254_RS15085 PF11898 Domain of unknown function (DUF3418) KQ254_RS15090 PF10417 C-terminal domain of 1-Cys peroxiredoxin KQ254_RS15090 PF00578 AhpC/TSA family KQ254_RS15110 PF13192 Thioredoxin domain KQ254_RS15110 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ254_RS15120 PF00043 Glutathione S-transferase, C-terminal domain KQ254_RS15120 PF02798 Glutathione S-transferase, N-terminal domain KQ254_RS15130 PF02390 Putative methyltransferase KQ254_RS15135 PF13417 Glutathione S-transferase, N-terminal domain KQ254_RS15135 PF00043 Glutathione S-transferase, C-terminal domain KQ254_RS15150 PF13488 Glycine zipper KQ254_RS15150 PF00691 OmpA family KQ254_RS15155 PF01979 Amidohydrolase family KQ254_RS15160 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KQ254_RS15160 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KQ254_RS15170 PF10672 S-adenosylmethionine-dependent methyltransferase KQ254_RS15170 PF01170 Putative RNA methylase family UPF0020 KQ254_RS15170 PF02926 THUMP domain KQ254_RS15185 PF00004 ATPase family associated with various cellular activities (AAA) KQ254_RS15185 PF17871 AAA lid domain KQ254_RS15185 PF07724 AAA domain (Cdc48 subfamily) KQ254_RS15185 PF02861 Clp amino terminal domain, pathogenicity island component KQ254_RS15185 PF10431 C-terminal, D2-small domain, of ClpB protein KQ254_RS15200 PF02566 OsmC-like protein KQ254_RS15210 PF00027 Cyclic nucleotide-binding domain KQ254_RS15210 PF13545 Crp-like helix-turn-helix domain KQ254_RS15215 PF00248 Aldo/keto reductase family KQ254_RS15230 PF00709 Adenylosuccinate synthetase KQ254_RS15235 PF13393 Histidyl-tRNA synthetase KQ254_RS15245 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KQ254_RS15245 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KQ254_RS15250 PF02272 DHHA1 domain KQ254_RS15250 PF01411 tRNA synthetases class II (A) KQ254_RS15250 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KQ254_RS15255 PF13840 ACT domain KQ254_RS15255 PF01842 ACT domain KQ254_RS15255 PF00696 Amino acid kinase family KQ254_RS15260 PF02599 Global regulator protein family KQ254_RS15265 PF01351 Ribonuclease HII KQ254_RS15275 PF01292 Prokaryotic cytochrome b561 KQ254_RS15280 PF00962 Adenosine/AMP deaminase KQ254_RS15285 PF00860 Permease family KQ254_RS15295 PF00743 Flavin-binding monooxygenase-like KQ254_RS15300 PF00106 short chain dehydrogenase KQ254_RS15310 PF02678 Pirin KQ254_RS15310 PF17954 Quercetinase C-terminal cupin domain KQ254_RS15315 PF17932 Tetracyclin repressor-like, C-terminal domain KQ254_RS15315 PF00440 Bacterial regulatory proteins, tetR family KQ254_RS15325 PF00106 short chain dehydrogenase KQ254_RS15330 PF00743 Flavin-binding monooxygenase-like KQ254_RS15335 PF04072 Leucine carboxyl methyltransferase KQ254_RS15340 PF12833 Helix-turn-helix domain KQ254_RS15340 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term KQ254_RS15345 PF00743 Flavin-binding monooxygenase-like KQ254_RS15350 PF00106 short chain dehydrogenase KQ254_RS15355 PF07859 alpha/beta hydrolase fold KQ254_RS15360 PF05199 GMC oxidoreductase KQ254_RS15365 PF03573 outer membrane porin, OprD family KQ254_RS15370 PF07690 Major Facilitator Superfamily KQ254_RS15375 PF00355 Rieske [2Fe-2S] domain KQ254_RS15380 PF00111 2Fe-2S iron-sulfur cluster binding domain KQ254_RS15380 PF00175 Oxidoreductase NAD-binding domain KQ254_RS15395 PF07690 Major Facilitator Superfamily KQ254_RS15400 PF00378 Enoyl-CoA hydratase/isomerase KQ254_RS15405 PF00171 Aldehyde dehydrogenase family KQ254_RS15415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ254_RS15415 PF02770 Acyl-CoA dehydrogenase, middle domain KQ254_RS15415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ254_RS15425 PF13737 Transposase DDE domain KQ254_RS15435 PF00324 Amino acid permease KQ254_RS15445 PF05643 Putative bacterial lipoprotein (DUF799) KQ254_RS15455 PF03783 Curli production assembly/transport component CsgG KQ254_RS15475 PF03180 NLPA lipoprotein KQ254_RS15485 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KQ254_RS15485 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ254_RS15490 PF00764 Arginosuccinate synthase KQ254_RS15495 PF00360 Phytochrome region KQ254_RS15495 PF00990 Diguanylate cyclase, GGDEF domain KQ254_RS15495 PF01590 GAF domain KQ254_RS15495 PF00563 EAL domain KQ254_RS15500 PF01979 Amidohydrolase family KQ254_RS15505 PF00929 Exonuclease KQ254_RS15515 PF00593 TonB dependent receptor KQ254_RS15515 PF07715 TonB-dependent Receptor Plug Domain KQ254_RS15520 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KQ254_RS15520 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ254_RS15525 PF00005 ABC transporter KQ254_RS15525 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KQ254_RS15530 PF00528 Binding-protein-dependent transport system inner membrane component KQ254_RS15530 PF12911 N-terminal TM domain of oligopeptide transport permease C KQ254_RS15535 PF00528 Binding-protein-dependent transport system inner membrane component KQ254_RS15540 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KQ254_RS15545 PF01464 Transglycosylase SLT domain KQ254_RS15545 PF01476 LysM domain KQ254_RS15545 PF01476 LysM domain KQ254_RS15545 PF01464 Transglycosylase SLT domain KQ254_RS15550 PF00929 Exonuclease KQ254_RS15560 PF00293 NUDIX domain KQ254_RS15560 PF09297 NADH pyrophosphatase zinc ribbon domain KQ254_RS15570 PF04972 BON domain KQ254_RS15580 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KQ254_RS15595 PF01810 LysE type translocator KQ254_RS15605 PF13411 MerR HTH family regulatory protein KQ254_RS15615 PF01494 FAD binding domain KQ254_RS15620 PF01494 FAD binding domain KQ254_RS15625 PF05195 Aminopeptidase P, N-terminal domain KQ254_RS15625 PF00557 Metallopeptidase family M24 KQ254_RS15710 PF01464 Transglycosylase SLT domain KQ254_RS15710 PF10145 Phage-related minor tail protein KQ254_RS15710 PF01551 Peptidase family M23 KQ254_RS15780 PF00772 DnaB-like helicase N terminal domain KQ254_RS15780 PF03796 DnaB-like helicase C terminal domain KQ254_RS15795 PF01726 LexA DNA binding domain KQ254_RS15795 PF00717 Peptidase S24-like KQ254_RS15850 PF08019 Phosphoethanolamine transferase EptA/EptB KQ254_RS15850 PF00884 Sulfatase KQ254_RS15915 PF13936 Helix-turn-helix domain KQ254_RS15915 PF00665 Integrase core domain KQ254_RS16125 PF01726 LexA DNA binding domain KQ254_RS16125 PF00717 Peptidase S24-like KQ254_RS16195 PF01812 5-formyltetrahydrofolate cyclo-ligase family KQ254_RS16200 PF04355 SmpA / OmlA family KQ254_RS16200 PF00691 OmpA family KQ254_RS16210 PF13737 Transposase DDE domain KQ254_RS16215 PF02190 ATP-dependent protease La (LON) substrate-binding domain KQ254_RS16215 PF05362 Lon protease (S16) C-terminal proteolytic domain KQ254_RS16215 PF00004 ATPase family associated with various cellular activities (AAA) KQ254_RS16220 PF02590 Predicted SPOUT methyltransferase KQ254_RS16225 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase KQ254_RS16235 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KQ254_RS16235 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KQ254_RS16240 PF04060 Putative Fe-S cluster KQ254_RS16245 PF00730 HhH-GPD superfamily base excision DNA repair protein KQ254_RS16245 PF00633 Helix-hairpin-helix motif KQ254_RS16245 PF10576 Iron-sulfur binding domain of endonuclease III KQ254_RS16255 PF05191 Adenylate kinase, active site lid KQ254_RS16270 PF03717 Penicillin-binding Protein dimerisation domain KQ254_RS16270 PF00905 Penicillin binding protein transpeptidase domain KQ254_RS16285 PF02492 CobW/HypB/UreG, nucleotide-binding domain KQ254_RS16290 PF01730 UreF KQ254_RS16295 PF05194 UreE urease accessory protein, C-terminal domain KQ254_RS16295 PF02814 UreE urease accessory protein, N-terminal domain KQ254_RS16300 PF01979 Amidohydrolase family KQ254_RS16300 PF00449 Urease alpha-subunit, N-terminal domain KQ254_RS16305 PF00699 Urease beta subunit KQ254_RS16310 PF00547 Urease, gamma subunit KQ254_RS16315 PF01774 UreD urease accessory protein KQ254_RS16330 PF00463 Isocitrate lyase family KQ254_RS16335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ254_RS16335 PF03466 LysR substrate binding domain KQ254_RS16340 PF00571 CBS domain KQ254_RS16340 PF03471 Transporter associated domain KQ254_RS16340 PF01595 Cyclin M transmembrane N-terminal domain KQ254_RS16345 PF03600 Citrate transporter KQ254_RS16360 PF00009 Elongation factor Tu GTP binding domain KQ254_RS16365 PF01507 Phosphoadenosine phosphosulfate reductase family KQ254_RS16375 PF14052 Capsule assembly protein Wzi KQ254_RS16380 PF01336 OB-fold nucleic acid binding domain KQ254_RS16380 PF00152 tRNA synthetases class II (D, K and N) KQ254_RS16395 PF00301 Rubredoxin KQ254_RS16400 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ254_RS16400 PF18113 Rubredoxin binding C-terminal domain KQ254_RS16405 PF00561 alpha/beta hydrolase fold KQ254_RS16410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ254_RS16410 PF03466 LysR substrate binding domain KQ254_RS16425 PF17941 Polyphosphate kinase C-terminal domain 1 KQ254_RS16425 PF13089 Polyphosphate kinase N-terminal domain KQ254_RS16425 PF02503 Polyphosphate kinase middle domain KQ254_RS16425 PF13090 Polyphosphate kinase C-terminal domain 2 KQ254_RS16430 PF00912 Transglycosylase KQ254_RS16435 PF01694 Rhomboid family KQ254_RS16445 PF00005 ABC transporter KQ254_RS16450 PF13472 GDSL-like Lipase/Acylhydrolase family KQ254_RS16455 PF00484 Carbonic anhydrase KQ254_RS16460 PF00561 alpha/beta hydrolase fold KQ254_RS16470 PF07715 TonB-dependent Receptor Plug Domain KQ254_RS16470 PF00593 TonB dependent receptor KQ254_RS16475 PF01521 Iron-sulphur cluster biosynthesis KQ254_RS16475 PF01106 NifU-like domain KQ254_RS16485 PF00884 Sulfatase KQ254_RS16490 PF03781 Sulfatase-modifying factor enzyme 1 KQ254_RS16505 PF00291 Pyridoxal-phosphate dependent enzyme KQ254_RS16510 PF01384 Phosphate transporter family KQ254_RS16515 PF02310 B12 binding domain KQ254_RS16515 PF02574 Homocysteine S-methyltransferase KQ254_RS16515 PF00809 Pterin binding enzyme KQ254_RS16515 PF02965 Vitamin B12 dependent methionine synthase, activation domain KQ254_RS16515 PF02607 B12 binding domain KQ254_RS16520 PF02780 Transketolase, C-terminal domain KQ254_RS16520 PF02779 Transketolase, pyrimidine binding domain KQ254_RS16525 PF00456 Transketolase, thiamine diphosphate binding domain KQ254_RS16530 PF07690 Major Facilitator Superfamily KQ254_RS16540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ254_RS16540 PF03466 LysR substrate binding domain KQ254_RS16550 PF01263 Aldose 1-epimerase KQ254_RS16560 PF07690 Major Facilitator Superfamily KQ254_RS16565 PF12833 Helix-turn-helix domain KQ254_RS16565 PF02311 AraC-like ligand binding domain KQ254_RS16570 PF04960 Glutaminase KQ254_RS16575 PF01327 Polypeptide deformylase KQ254_RS16580 PF07690 Major Facilitator Superfamily KQ254_RS16590 PF00205 Thiamine pyrophosphate enzyme, central domain KQ254_RS16590 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KQ254_RS16590 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KQ254_RS16595 PF00171 Aldehyde dehydrogenase family KQ254_RS16600 PF03447 Homoserine dehydrogenase, NAD binding domain KQ254_RS16600 PF01958 Domain of unknown function DUF108 KQ254_RS16610 PF12697 Alpha/beta hydrolase family KQ254_RS16620 PF07690 Major Facilitator Superfamily KQ254_RS16625 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ254_RS16625 PF14759 Reductase C-terminal KQ254_RS16630 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KQ254_RS16640 PF00355 Rieske [2Fe-2S] domain KQ254_RS16650 PF00355 Rieske [2Fe-2S] domain KQ254_RS16655 PF09339 IclR helix-turn-helix domain KQ254_RS16655 PF01614 Bacterial transcriptional regulator KQ254_RS16670 PF00378 Enoyl-CoA hydratase/isomerase KQ254_RS16680 PF00535 Glycosyl transferase family 2 KQ254_RS16685 PF14883 Hypothetical glycosyl hydrolase family 13 KQ254_RS16685 PF01522 Polysaccharide deacetylase KQ254_RS16690 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KQ254_RS16695 PF07152 YaeQ protein KQ254_RS16700 PF00375 Sodium:dicarboxylate symporter family KQ254_RS16705 PF02492 CobW/HypB/UreG, nucleotide-binding domain KQ254_RS16705 PF07683 Cobalamin synthesis protein cobW C-terminal domain KQ254_RS16715 PF03061 Thioesterase superfamily KQ254_RS16725 PF02028 BCCT, betaine/carnitine/choline family transporter KQ254_RS16730 PF02028 BCCT, betaine/carnitine/choline family transporter KQ254_RS16735 PF13977 BetI-type transcriptional repressor, C-terminal KQ254_RS16735 PF00440 Bacterial regulatory proteins, tetR family KQ254_RS16740 PF00171 Aldehyde dehydrogenase family KQ254_RS16745 PF05199 GMC oxidoreductase KQ254_RS16745 PF00732 GMC oxidoreductase KQ254_RS16750 PF06039 Malate:quinone oxidoreductase (Mqo) KQ254_RS16760 PF02574 Homocysteine S-methyltransferase KQ254_RS16765 PF13520 Amino acid permease KQ254_RS16790 PF01126 Heme oxygenase KQ254_RS16800 PF04575 Protein of unknown function (DUF560) KQ254_RS16810 PF00593 TonB dependent receptor KQ254_RS16810 PF07715 TonB-dependent Receptor Plug Domain KQ254_RS16820 PF04542 Sigma-70 region 2 KQ254_RS16820 PF08281 Sigma-70, region 4 KQ254_RS16830 PF00701 Dihydrodipicolinate synthetase family KQ254_RS16835 PF00083 Sugar (and other) transporter KQ254_RS16860 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) KQ254_RS16860 PF18766 SWI2/SNF2 ATPase KQ254_RS16860 PF11867 Domain of unknown function (DUF3387) KQ254_RS16870 PF02384 N-6 DNA Methylase KQ254_RS16885 PF00717 Peptidase S24-like KQ254_RS16890 PF13438 Domain of unknown function (DUF4113) KQ254_RS16890 PF00817 impB/mucB/samB family KQ254_RS16890 PF11799 impB/mucB/samB family C-terminal domain KQ254_RS16890 PF11798 IMS family HHH motif KQ254_RS16975 PF00712 DNA polymerase III beta subunit, N-terminal domain KQ254_RS16975 PF02767 DNA polymerase III beta subunit, central domain KQ254_RS16975 PF02768 DNA polymerase III beta subunit, C-terminal domain KQ254_RS17015 PF05016 ParE toxin of type II toxin-antitoxin system, parDE KQ254_RS17210 PF01695 IstB-like ATP binding protein KQ254_RS17220 PF00145 C-5 cytosine-specific DNA methylase KQ254_RS17305 PF00929 Exonuclease KQ254_RS17380 PF07690 Major Facilitator Superfamily KQ254_RS17385 PF13533 Biotin-lipoyl like KQ254_RS17390 PF03061 Thioesterase superfamily KQ254_RS17395 PF00490 Delta-aminolevulinic acid dehydratase KQ254_RS17400 PF01266 FAD dependent oxidoreductase KQ254_RS17405 PF08338 Domain of unknown function (DUF1731) KQ254_RS17405 PF01370 NAD dependent epimerase/dehydratase family KQ254_RS17425 PF00149 Calcineurin-like phosphoesterase KQ254_RS17425 PF12320 Type 5 capsule protein repressor C-terminal domain KQ254_RS17435 PF01168 Alanine racemase, N-terminal domain KQ254_RS17440 PF00437 Type II/IV secretion system protein KQ254_RS17450 PF13936 Helix-turn-helix domain KQ254_RS17450 PF00665 Integrase core domain KQ254_RS17460 PF01475 Ferric uptake regulator family KQ254_RS17465 PF04355 SmpA / OmlA family KQ254_RS17470 PF03658 RnfH family Ubiquitin KQ254_RS17480 PF01814 Hemerythrin HHE cation binding domain KQ254_RS17485 PF13230 Glutamine amidotransferases class-II KQ254_RS17495 PF00696 Amino acid kinase family KQ254_RS17500 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KQ254_RS17500 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KQ254_RS17500 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KQ254_RS17500 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KQ254_RS17505 PF00692 dUTPase KQ254_RS17510 PF13361 UvrD-like helicase C-terminal domain KQ254_RS17510 PF00580 UvrD/REP helicase N-terminal domain KQ254_RS17515 PF00691 OmpA family KQ254_RS17515 PF13488 Glycine zipper KQ254_RS17520 PF01553 Acyltransferase KQ254_RS17530 PF03775 Septum formation inhibitor MinC, C-terminal domain KQ254_RS17535 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KQ254_RS17540 PF03776 Septum formation topological specificity factor MinE KQ254_RS17550 PF01810 LysE type translocator KQ254_RS17555 PF17854 FtsK alpha domain KQ254_RS17555 PF13491 4TM region of DNA translocase FtsK/SpoIIIE KQ254_RS17555 PF09397 Ftsk gamma domain KQ254_RS17555 PF01580 FtsK/SpoIIIE family KQ254_RS17560 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ254_RS17565 PF03588 Leucyl/phenylalanyl-tRNA protein transferase KQ254_RS17570 PF04377 Arginine-tRNA-protein transferase, C terminus KQ254_RS17570 PF04376 Arginine-tRNA-protein transferase, N terminus KQ254_RS17575 PF00583 Acetyltransferase (GNAT) family KQ254_RS17590 PF03143 Elongation factor Tu C-terminal domain KQ254_RS17590 PF00009 Elongation factor Tu GTP binding domain KQ254_RS17590 PF03144 Elongation factor Tu domain 2 KQ254_RS17595 PF03764 Elongation factor G, domain IV KQ254_RS17595 PF00679 Elongation factor G C-terminus KQ254_RS17595 PF14492 Elongation Factor G, domain II KQ254_RS17595 PF00009 Elongation factor Tu GTP binding domain KQ254_RS17595 PF03144 Elongation factor Tu domain 2 KQ254_RS17600 PF00177 Ribosomal protein S7p/S5e KQ254_RS17605 PF00164 Ribosomal protein S12/S23 KQ254_RS17615 PF02801 Beta-ketoacyl synthase, C-terminal domain KQ254_RS17615 PF00109 Beta-ketoacyl synthase, N-terminal domain KQ254_RS17620 PF03653 Uncharacterised protein family (UPF0093) KQ254_RS17625 PF05726 Pirin C-terminal cupin domain KQ254_RS17625 PF02678 Pirin KQ254_RS17635 PF00795 Carbon-nitrogen hydrolase KQ254_RS17635 PF02540 NAD synthase KQ254_RS17650 PF00175 Oxidoreductase NAD-binding domain KQ254_RS17650 PF00111 2Fe-2S iron-sulfur cluster binding domain KQ254_RS17650 PF00970 Oxidoreductase FAD-binding domain KQ254_RS17655 PF00171 Aldehyde dehydrogenase family KQ254_RS17660 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KQ254_RS17660 PF00355 Rieske [2Fe-2S] domain KQ254_RS17665 PF07859 alpha/beta hydrolase fold KQ254_RS17670 PF02028 BCCT, betaine/carnitine/choline family transporter KQ254_RS17675 PF00180 Isocitrate/isopropylmalate dehydrogenase KQ254_RS17680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ254_RS17680 PF03466 LysR substrate binding domain KQ254_RS17700 PF00037 4Fe-4S binding domain KQ254_RS17705 PF01467 Cytidylyltransferase-like KQ254_RS17710 PF13356 Arm DNA-binding domain KQ254_RS17710 PF00589 Phage integrase family KQ254_RS17780 PF03869 Arc-like DNA binding domain KQ254_RS18015 PF01668 SmpB protein KQ254_RS18020 PF03358 NADPH-dependent FMN reductase KQ254_RS18025 PF02578 Multi-copper polyphenol oxidoreductase laccase KQ254_RS18030 PF01479 S4 domain KQ254_RS18030 PF00849 RNA pseudouridylate synthase KQ254_RS18035 PF13525 Outer membrane lipoprotein KQ254_RS18040 PF08275 DNA primase catalytic core, N-terminal domain KQ254_RS18040 PF01807 CHC2 zinc finger KQ254_RS18040 PF08278 DNA primase DnaG DnaB-binding KQ254_RS18040 PF10410 DnaB-helicase binding domain of primase KQ254_RS18045 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain KQ254_RS18045 PF01488 Shikimate / quinate 5-dehydrogenase KQ254_RS18045 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain KQ254_RS18060 PF03550 Outer membrane lipoprotein LolB KQ254_RS18065 PF08544 GHMP kinases C terminal KQ254_RS18065 PF00288 GHMP kinases N terminal domain KQ254_RS18090 PF14572 Phosphoribosyl synthetase-associated domain KQ254_RS18090 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KQ254_RS18095 PF01386 Ribosomal L25p family KQ254_RS18100 PF01195 Peptidyl-tRNA hydrolase KQ254_RS18105 PF02261 Aspartate decarboxylase KQ254_RS18120 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KQ254_RS18130 PF03070 TENA/THI-4/PQQC family KQ254_RS18130 PF08543 Phosphomethylpyrimidine kinase KQ254_RS18130 PF02581 Thiamine monophosphate synthase KQ254_RS18135 PF04972 BON domain KQ254_RS18135 PF01476 LysM domain KQ254_RS18140 PF00550 Phosphopantetheine attachment site KQ254_RS18150 PF00698 Acyl transferase domain KQ254_RS18155 PF01783 Ribosomal L32p protein family KQ254_RS18160 PF02620 Large ribosomal RNA subunit accumulation protein YceD KQ254_RS18165 PF04315 Elongation factor P hydroxylase KQ254_RS18170 PF01300 Telomere recombination KQ254_RS18175 PF02616 Segregation and condensation protein ScpA KQ254_RS18180 PF04079 Segregation and condensation complex subunit ScpB KQ254_RS18185 PF01479 S4 domain KQ254_RS18185 PF00849 RNA pseudouridylate synthase KQ254_RS18200 PF00155 Aminotransferase class I and II KQ254_RS18205 PF06968 Biotin and Thiamin Synthesis associated domain KQ254_RS18205 PF00202 Aminotransferase class-III KQ254_RS18205 PF04055 Radical SAM superfamily KQ254_RS18210 PF08241 Methyltransferase domain KQ254_RS18210 PF12697 Alpha/beta hydrolase family KQ254_RS18215 PF02358 Trehalose-phosphatase KQ254_RS18220 PF00982 Glycosyltransferase family 20 KQ254_RS18225 PF07690 Major Facilitator Superfamily KQ254_RS18230 PF00210 Ferritin-like domain KQ254_RS18235 PF12826 Helix-hairpin-helix motif KQ254_RS18235 PF00533 BRCA1 C Terminus (BRCT) domain KQ254_RS18235 PF01653 NAD-dependent DNA ligase adenylation domain KQ254_RS18235 PF03120 NAD-dependent DNA ligase OB-fold domain KQ254_RS18235 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KQ254_RS18245 PF06470 SMC proteins Flexible Hinge Domain KQ254_RS18245 PF02463 RecF/RecN/SMC N terminal domain KQ254_RS18255 PF01925 Sulfite exporter TauE/SafE KQ254_RS18265 PF03309 Type III pantothenate kinase KQ254_RS18270 PF02881 SRP54-type protein, helical bundle domain KQ254_RS18270 PF00448 SRP54-type protein, GTPase domain KQ254_RS18270 PF02978 Signal peptide binding domain KQ254_RS18280 PF01207 Dihydrouridine synthase (Dus) KQ254_RS18310 PF00692 dUTPase KQ254_RS18325 PF01048 Phosphorylase superfamily KQ254_RS18330 PF10609 NUBPL iron-transfer P-loop NTPase KQ254_RS18340 PF09334 tRNA synthetases class I (M) KQ254_RS18340 PF01588 Putative tRNA binding domain KQ254_RS18365 PF13533 Biotin-lipoyl like KQ254_RS18370 PF00291 Pyridoxal-phosphate dependent enzyme KQ254_RS18385 PF05552 Conserved TM helix KQ254_RS18400 PF00970 Oxidoreductase FAD-binding domain KQ254_RS18400 PF00175 Oxidoreductase NAD-binding domain KQ254_RS18405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ254_RS18405 PF03466 LysR substrate binding domain KQ254_RS18410 PF00313 'Cold-shock' DNA-binding domain KQ254_RS18420 PF00361 Proton-conducting membrane transporter KQ254_RS18425 PF00361 Proton-conducting membrane transporter KQ254_RS18430 PF00361 Proton-conducting membrane transporter KQ254_RS18430 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KQ254_RS18435 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KQ254_RS18440 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 KQ254_RS18445 PF12838 4Fe-4S dicluster domain KQ254_RS18450 PF00146 NADH dehydrogenase KQ254_RS18455 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KQ254_RS18455 PF00384 Molybdopterin oxidoreductase KQ254_RS18455 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KQ254_RS18460 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit KQ254_RS18460 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region KQ254_RS18460 PF10531 SLBB domain KQ254_RS18470 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit KQ254_RS18470 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit KQ254_RS18475 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit KQ254_RS18480 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 KQ254_RS18485 PF17158 Membrane-associated sensor, integral membrane domain KQ254_RS18485 PF00990 Diguanylate cyclase, GGDEF domain KQ254_RS18495 PF00672 HAMP domain KQ254_RS18495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ254_RS18495 PF00512 His Kinase A (phospho-acceptor) domain KQ254_RS18500 PF00072 Response regulator receiver domain KQ254_RS18500 PF00486 Transcriptional regulatory protein, C terminal KQ254_RS18510 PF00317 Ribonucleotide reductase, all-alpha domain KQ254_RS18510 PF02867 Ribonucleotide reductase, barrel domain KQ254_RS18510 PF03477 ATP cone domain KQ254_RS18520 PF00268 Ribonucleotide reductase, small chain KQ254_RS18525 PF13737 Transposase DDE domain KQ254_RS18535 PF01613 Flavin reductase like domain KQ254_RS18540 PF08267 Cobalamin-independent synthase, N-terminal domain KQ254_RS18540 PF01717 Cobalamin-independent synthase, Catalytic domain KQ254_RS18550 PF03466 LysR substrate binding domain KQ254_RS18550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ254_RS18555 PF01810 LysE type translocator KQ254_RS18560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ254_RS18560 PF03466 LysR substrate binding domain KQ254_RS18565 PF07690 Major Facilitator Superfamily KQ254_RS18575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ254_RS18575 PF03466 LysR substrate binding domain KQ254_RS18580 PF14537 Cytochrome c3 KQ254_RS18580 PF00890 FAD binding domain KQ254_RS18595 PF17932 Tetracyclin repressor-like, C-terminal domain KQ254_RS18595 PF00440 Bacterial regulatory proteins, tetR family KQ254_RS18600 PF02515 CoA-transferase family III KQ254_RS18605 PF07690 Major Facilitator Superfamily KQ254_RS18610 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ254_RS18610 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ254_RS18610 PF02770 Acyl-CoA dehydrogenase, middle domain KQ254_RS18615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ254_RS18615 PF03466 LysR substrate binding domain KQ254_RS18650 PF02445 Quinolinate synthetase A protein KQ254_RS18655 PF01960 ArgJ family KQ254_RS18660 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KQ254_RS18660 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KQ254_RS18665 PF00893 Small Multidrug Resistance protein KQ254_RS18675 PF05275 Copper resistance protein B precursor (CopB) KQ254_RS18680 PF00394 Multicopper oxidase KQ254_RS18680 PF07731 Multicopper oxidase KQ254_RS18680 PF07732 Multicopper oxidase KQ254_RS18695 PF00834 Ribulose-phosphate 3 epimerase family KQ254_RS18705 PF00756 Putative esterase KQ254_RS18715 PF04445 Putative SAM-dependent methyltransferase KQ254_RS18720 PF00814 Glycoprotease family KQ254_RS18725 PF00132 Bacterial transferase hexapeptide (six repeats) KQ254_RS18730 PF00293 NUDIX domain KQ254_RS18740 PF00872 Transposase, Mutator family KQ254_RS18755 PF04715 Anthranilate synthase component I, N terminal region KQ254_RS18755 PF00425 chorismate binding enzyme KQ254_RS18760 PF00155 Aminotransferase class I and II KQ254_RS18765 PF00815 Histidinol dehydrogenase KQ254_RS18770 PF01634 ATP phosphoribosyltransferase KQ254_RS18775 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KQ254_RS18780 PF01722 BolA-like protein KQ254_RS18785 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KQ254_RS18790 PF00309 Sigma-54 factor, Activator interacting domain (AID) KQ254_RS18790 PF04552 Sigma-54, DNA binding domain KQ254_RS18790 PF04963 Sigma-54 factor, core binding domain KQ254_RS18835 PF00795 Carbon-nitrogen hydrolase KQ254_RS18845 PF01047 MarR family KQ254_RS18850 PF02566 OsmC-like protein KQ254_RS18855 PF00437 Type II/IV secretion system protein KQ254_RS18875 PF01367 5'-3' exonuclease, C-terminal SAM fold KQ254_RS18875 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KQ254_RS18875 PF00476 DNA polymerase family A KQ254_RS18875 PF01612 3'-5' exonuclease KQ254_RS18880 PF02325 YGGT family KQ254_RS18885 PF14748 Pyrroline-5-carboxylate reductase dimerisation KQ254_RS18885 PF03807 NADP oxidoreductase coenzyme F420-dependent KQ254_RS18890 PF11734 TilS substrate C-terminal domain KQ254_RS18890 PF01171 PP-loop family KQ254_RS18890 PF09179 TilS substrate binding domain KQ254_RS18895 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit KQ254_RS18900 PF02541 Ppx/GppA phosphatase family KQ254_RS18905 PF00085 Thioredoxin KQ254_RS18910 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KQ254_RS18910 PF07498 Rho termination factor, N-terminal domain KQ254_RS18910 PF07497 Rho termination factor, RNA-binding domain KQ254_RS18925 PF00216 Bacterial DNA-binding protein KQ254_RS18930 PF03483 B3/4 domain KQ254_RS18930 PF03484 tRNA synthetase B5 domain KQ254_RS18930 PF03147 Ferredoxin-fold anticodon binding domain KQ254_RS18930 PF01588 Putative tRNA binding domain KQ254_RS18930 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain KQ254_RS18935 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain KQ254_RS18935 PF01409 tRNA synthetases class II core domain (F) KQ254_RS18955 PF00453 Ribosomal protein L20 KQ254_RS18960 PF01632 Ribosomal protein L35 KQ254_RS18970 PF07690 Major Facilitator Superfamily KQ254_RS18975 PF09335 SNARE associated Golgi protein KQ254_RS18980 PF00043 Glutathione S-transferase, C-terminal domain KQ254_RS18980 PF02798 Glutathione S-transferase, N-terminal domain KQ254_RS18985 PF00707 Translation initiation factor IF-3, C-terminal domain KQ254_RS18985 PF05198 Translation initiation factor IF-3, N-terminal domain KQ254_RS18990 PF03129 Anticodon binding domain KQ254_RS18990 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KQ254_RS18990 PF02824 TGS domain KQ254_RS18990 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KQ254_RS18995 PF00501 AMP-binding enzyme KQ254_RS18995 PF13193 AMP-binding enzyme C-terminal domain KQ254_RS19000 PF04751 Protein of unknown function (DUF615) KQ254_RS19005 PF00381 PTS HPr component phosphorylation site KQ254_RS19010 PF03668 P-loop ATPase protein family KQ254_RS19015 PF02569 Pantoate-beta-alanine ligase KQ254_RS19020 PF02548 Ketopantoate hydroxymethyltransferase KQ254_RS19025 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KQ254_RS19030 PF12627 Probable RNA and SrmB- binding site of polymerase A KQ254_RS19030 PF12626 Polymerase A arginine-rich C-terminus KQ254_RS19030 PF01743 Poly A polymerase head domain KQ254_RS19040 PF03819 MazG nucleotide pyrophosphohydrolase domain KQ254_RS19050 PF13291 ACT domain KQ254_RS19050 PF04607 Region found in RelA / SpoT proteins KQ254_RS19050 PF02824 TGS domain KQ254_RS19055 PF05958 tRNA (Uracil-5-)-methyltransferase KQ254_RS19065 PF00291 Pyridoxal-phosphate dependent enzyme KQ254_RS19070 PF00512 His Kinase A (phospho-acceptor) domain KQ254_RS19070 PF00672 HAMP domain KQ254_RS19070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ254_RS19070 PF01627 Hpt domain KQ254_RS19070 PF00072 Response regulator receiver domain KQ254_RS19070 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KQ254_RS19075 PF00378 Enoyl-CoA hydratase/isomerase KQ254_RS19080 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KQ254_RS19080 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KQ254_RS19085 PF01261 Xylose isomerase-like TIM barrel KQ254_RS19095 PF00106 short chain dehydrogenase KQ254_RS19100 PF02233 NAD(P) transhydrogenase beta subunit KQ254_RS19105 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch KQ254_RS19110 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KQ254_RS19110 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KQ254_RS19115 PF00892 EamA-like transporter family KQ254_RS19125 PF07690 Major Facilitator Superfamily KQ254_RS19130 PF01207 Dihydrouridine synthase (Dus) KQ254_RS19140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ254_RS19140 PF03466 LysR substrate binding domain KQ254_RS19150 PF00899 ThiF family KQ254_RS19155 PF00330 Aconitase family (aconitate hydratase) KQ254_RS19155 PF00694 Aconitase C-terminal domain KQ254_RS19160 PF01026 TatD related DNase KQ254_RS19175 PF00009 Elongation factor Tu GTP binding domain KQ254_RS19175 PF03144 Elongation factor Tu domain 2 KQ254_RS19175 PF16658 Class II release factor RF3, C-terminal domain KQ254_RS19185 PF13737 Transposase DDE domain KQ254_RS19195 PF01726 LexA DNA binding domain KQ254_RS19195 PF00717 Peptidase S24-like KQ254_RS19200 PF13438 Domain of unknown function (DUF4113) KQ254_RS19200 PF00817 impB/mucB/samB family KQ254_RS19200 PF11799 impB/mucB/samB family C-terminal domain KQ254_RS19200 PF11798 IMS family HHH motif KQ254_RS19235 PF02661 Fic/DOC family KQ254_RS19255 PF00245 Alkaline phosphatase KQ254_RS19270 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KQ254_RS19280 PF13610 DDE domain KQ254_RS19315 PF03743 Bacterial conjugation TrbI-like protein KQ254_RS19330 PF13356 Arm DNA-binding domain KQ254_RS19330 PF14659 Phage integrase, N-terminal SAM-like domain KQ254_RS19330 PF00589 Phage integrase family KQ254_RS19340 PF00809 Pterin binding enzyme KQ254_RS19355 PF13610 DDE domain KQ254_RS19360 PF11798 IMS family HHH motif KQ254_RS19360 PF11799 impB/mucB/samB family C-terminal domain KQ254_RS19360 PF00817 impB/mucB/samB family KQ254_RS19360 PF13438 Domain of unknown function (DUF4113) KQ254_RS19365 PF00717 Peptidase S24-like KQ254_RS19395 PF02522 Aminoglycoside 3-N-acetyltransferase KQ254_RS19400 PF13610 DDE domain KQ254_RS19420 PF13936 Helix-turn-helix domain KQ254_RS19420 PF00665 Integrase core domain KQ254_RS19425 PF01636 Phosphotransferase enzyme family KQ254_RS19430 PF13936 Helix-turn-helix domain KQ254_RS19430 PF00665 Integrase core domain KQ254_RS19455 PF01636 Phosphotransferase enzyme family KQ254_RS19460 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase KQ254_RS19480 PF13610 DDE domain KQ254_RS19500 PF13356 Arm DNA-binding domain KQ254_RS19500 PF00589 Phage integrase family KQ254_RS19525 PF13610 DDE domain KQ254_RS19530 PF01051 Initiator Replication protein KQ254_RS19545 PF02796 Helix-turn-helix domain of resolvase KQ254_RS19545 PF00239 Resolvase, N terminal domain KQ254_RS19550 PF00313 'Cold-shock' DNA-binding domain KQ254_RS19580 PF12833 Helix-turn-helix domain KQ254_RS19590 PF00905 Penicillin binding protein transpeptidase domain KQ254_RS19595 PF13610 DDE domain KQ254_RS19615 PF07715 TonB-dependent Receptor Plug Domain KQ254_RS19615 PF00593 TonB dependent receptor KQ254_RS19675 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system KQ254_RS19695 PF03389 MobA/MobL family KQ254_RS19700 PF01051 Initiator Replication protein KQ254_RS19715 PF13610 DDE domain KQ254_RS19730 PF13610 DDE domain