locus-tag class description KQ251_RS00010 PF00584 SecE/Sec61-gamma subunits of protein translocation complex KQ251_RS00015 PF00467 KOW motif KQ251_RS00015 PF02357 Transcription termination factor nusG KQ251_RS00020 PF00298 Ribosomal protein L11, RNA binding domain KQ251_RS00020 PF03946 Ribosomal protein L11, N-terminal domain KQ251_RS00025 PF00687 Ribosomal protein L1p/L10e family KQ251_RS00030 PF00466 Ribosomal protein L10 KQ251_RS00035 PF16320 Ribosomal protein L7/L12 dimerisation domain KQ251_RS00035 PF00542 Ribosomal protein L7/L12 C-terminal domain KQ251_RS00040 PF04563 RNA polymerase beta subunit KQ251_RS00040 PF04561 RNA polymerase Rpb2, domain 2 KQ251_RS00040 PF04565 RNA polymerase Rpb2, domain 3 KQ251_RS00040 PF10385 RNA polymerase beta subunit external 1 domain KQ251_RS00040 PF00562 RNA polymerase Rpb2, domain 6 KQ251_RS00040 PF04560 RNA polymerase Rpb2, domain 7 KQ251_RS00045 PF04998 RNA polymerase Rpb1, domain 5 KQ251_RS00045 PF05000 RNA polymerase Rpb1, domain 4 KQ251_RS00045 PF04997 RNA polymerase Rpb1, domain 1 KQ251_RS00045 PF00623 RNA polymerase Rpb1, domain 2 KQ251_RS00045 PF04983 RNA polymerase Rpb1, domain 3 KQ251_RS00070 PF13726 Na+-H+ antiporter family KQ251_RS00070 PF03553 Na+/H+ antiporter family KQ251_RS00085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ251_RS00085 PF00183 Hsp90 protein KQ251_RS00100 PF01323 DSBA-like thioredoxin domain KQ251_RS00110 PF00376 MerR family regulatory protein KQ251_RS00110 PF09278 MerR, DNA binding KQ251_RS00125 PF02803 Thiolase, C-terminal domain KQ251_RS00125 PF00108 Thiolase, N-terminal domain KQ251_RS00130 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KQ251_RS00130 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KQ251_RS00130 PF00378 Enoyl-CoA hydratase/isomerase KQ251_RS00155 PF01541 GIY-YIG catalytic domain KQ251_RS00155 PF02151 UvrB/uvrC motif KQ251_RS00155 PF08459 UvrC Helix-hairpin-helix N-terminal KQ251_RS00165 PF01066 CDP-alcohol phosphatidyltransferase KQ251_RS00170 PF02805 Metal binding domain of Ada KQ251_RS00170 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KQ251_RS00170 PF12833 Helix-turn-helix domain KQ251_RS00170 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KQ251_RS00195 PF13533 Biotin-lipoyl like KQ251_RS00200 PF03652 Holliday junction resolvase KQ251_RS00205 PF02622 Uncharacterized ACR, COG1678 KQ251_RS00210 PF02463 RecF/RecN/SMC N terminal domain KQ251_RS00220 PF06865 Pyrimidine/purine nucleoside phosphorylase KQ251_RS00225 PF00588 SpoU rRNA Methylase family KQ251_RS00225 PF08032 RNA 2'-O ribose methyltransferase substrate binding KQ251_RS00235 PF01121 Dephospho-CoA kinase KQ251_RS00240 PF06750 Bacterial Peptidase A24 N-terminal domain KQ251_RS00240 PF01478 Type IV leader peptidase family KQ251_RS00250 PF00482 Type II secretion system (T2SS), protein F KQ251_RS00255 PF00437 Type II/IV secretion system protein KQ251_RS00255 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KQ251_RS00260 PF00121 Triosephosphate isomerase KQ251_RS00265 PF03840 Preprotein translocase SecG subunit KQ251_RS00285 PF02576 RimP N-terminal domain KQ251_RS00285 PF17384 RimP C-terminal SH3 domain KQ251_RS00290 PF13184 NusA-like KH domain KQ251_RS00290 PF08529 NusA N-terminal domain KQ251_RS00290 PF00575 S1 RNA binding domain KQ251_RS00295 PF04760 Translation initiation factor IF-2, N-terminal region KQ251_RS00295 PF08364 Bacterial translation initiation factor IF-2 associated region KQ251_RS00295 PF00009 Elongation factor Tu GTP binding domain KQ251_RS00295 PF11987 Translation-initiation factor 2 KQ251_RS00300 PF02033 Ribosome-binding factor A KQ251_RS00305 PF03334 Na+/H+ antiporter subunit KQ251_RS00310 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) KQ251_RS00315 PF01899 Na+/H+ ion antiporter subunit KQ251_RS00320 PF00361 Proton-conducting membrane transporter KQ251_RS00325 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KQ251_RS00330 PF13244 Domain of unknown function (DUF4040) KQ251_RS00330 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter KQ251_RS00330 PF00361 Proton-conducting membrane transporter KQ251_RS00330 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KQ251_RS00345 PF01502 Phosphoribosyl-AMP cyclohydrolase KQ251_RS00350 PF01494 FAD binding domain KQ251_RS00355 PF03109 ABC1 family KQ251_RS00365 PF01209 ubiE/COQ5 methyltransferase family KQ251_RS00375 PF03976 Polyphosphate kinase 2 (PPK2) KQ251_RS00385 PF17946 RecC C-terminal domain KQ251_RS00390 PF13361 UvrD-like helicase C-terminal domain KQ251_RS00390 PF12705 PD-(D/E)XK nuclease superfamily KQ251_RS00390 PF00580 UvrD/REP helicase N-terminal domain KQ251_RS00395 PF13538 UvrD-like helicase C-terminal domain KQ251_RS00400 PF00144 Beta-lactamase KQ251_RS00405 PF00312 Ribosomal protein S15 KQ251_RS00410 PF00013 KH domain KQ251_RS00410 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain KQ251_RS00410 PF01138 3' exoribonuclease family, domain 1 KQ251_RS00410 PF03725 3' exoribonuclease family, domain 2 KQ251_RS00410 PF00575 S1 RNA binding domain KQ251_RS00415 PF01544 CorA-like Mg2+ transporter protein KQ251_RS00425 PF01556 DnaJ C terminal domain KQ251_RS00425 PF00226 DnaJ domain KQ251_RS00435 PF01430 Hsp33 protein KQ251_RS00440 PF02254 TrkA-N domain KQ251_RS00440 PF00999 Sodium/hydrogen exchanger family KQ251_RS00445 PF18319 PriA DNA helicase Cys-rich region (CRR) domain KQ251_RS00445 PF17764 3′ DNA-binding domain (3′BD) KQ251_RS00445 PF00271 Helicase conserved C-terminal domain KQ251_RS00445 PF18074 Primosomal protein N C-terminal domain KQ251_RS00445 PF00270 DEAD/DEAH box helicase KQ251_RS00450 PF00482 Type II secretion system (T2SS), protein F KQ251_RS00455 PF07963 Prokaryotic N-terminal methylation motif KQ251_RS00455 PF08334 Type II secretion system (T2SS), protein G KQ251_RS00465 PF01588 Putative tRNA binding domain KQ251_RS00470 PF00795 Carbon-nitrogen hydrolase KQ251_RS00475 PF00571 CBS domain KQ251_RS00475 PF03471 Transporter associated domain KQ251_RS00480 PF01206 Sulfurtransferase TusA KQ251_RS00500 PF01177 Asp/Glu/Hydantoin racemase KQ251_RS00510 PF00762 Ferrochelatase KQ251_RS00515 PF00753 Metallo-beta-lactamase superfamily KQ251_RS00520 PF03884 DNA gyrase inhibitor YacG KQ251_RS00530 PF13247 4Fe-4S dicluster domain KQ251_RS00530 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KQ251_RS00530 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ251_RS00540 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KQ251_RS00550 PF01197 Ribosomal protein L31 KQ251_RS00555 PF03109 ABC1 family KQ251_RS00560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ251_RS00560 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KQ251_RS00565 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KQ251_RS00565 PF02770 Acyl-CoA dehydrogenase, middle domain KQ251_RS00565 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ251_RS00570 PF01554 MatE KQ251_RS00580 PF04055 Radical SAM superfamily KQ251_RS00580 PF06969 HemN C-terminal domain KQ251_RS00585 PF00106 short chain dehydrogenase KQ251_RS00590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_RS00590 PF03466 LysR substrate binding domain KQ251_RS00605 PF00501 AMP-binding enzyme KQ251_RS00605 PF13193 AMP-binding enzyme C-terminal domain KQ251_RS00610 PF10150 Ribonuclease E/G family KQ251_RS00610 PF12111 Polyribonucleotide phosphorylase C terminal KQ251_RS00610 PF00575 S1 RNA binding domain KQ251_RS00615 PF00849 RNA pseudouridylate synthase KQ251_RS00615 PF01479 S4 domain KQ251_RS00620 PF13419 Haloacid dehalogenase-like hydrolase KQ251_RS00625 PF13280 WYL domain KQ251_RS00625 PF08279 HTH domain KQ251_RS00630 PF02798 Glutathione S-transferase, N-terminal domain KQ251_RS00640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_RS00640 PF03466 LysR substrate binding domain KQ251_RS00645 PF12706 Beta-lactamase superfamily domain KQ251_RS00650 PF00141 Peroxidase KQ251_RS00655 PF00391 PEP-utilising enzyme, mobile domain KQ251_RS00655 PF02896 PEP-utilising enzyme, TIM barrel domain KQ251_RS00655 PF05524 PEP-utilising enzyme, N-terminal KQ251_RS00655 PF01590 GAF domain KQ251_RS00660 PF00293 NUDIX domain KQ251_RS00680 PF03466 LysR substrate binding domain KQ251_RS00680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_RS00690 PF00330 Aconitase family (aconitate hydratase) KQ251_RS00695 PF00694 Aconitase C-terminal domain KQ251_RS00705 PF00180 Isocitrate/isopropylmalate dehydrogenase KQ251_RS00720 PF01176 Translation initiation factor 1A / IF-1 KQ251_RS00730 PF01416 tRNA pseudouridine synthase KQ251_RS00750 PF02774 Semialdehyde dehydrogenase, dimerisation domain KQ251_RS00750 PF01118 Semialdehyde dehydrogenase, NAD binding domain KQ251_RS00760 PF00375 Sodium:dicarboxylate symporter family KQ251_RS00770 PF03279 Bacterial lipid A biosynthesis acyltransferase KQ251_RS00775 PF01810 LysE type translocator KQ251_RS00780 PF00005 ABC transporter KQ251_RS00780 PF16326 ABC transporter C-terminal domain KQ251_RS00780 PF12848 ABC transporter KQ251_RS00785 PF04102 SlyX KQ251_RS00790 PF08240 Alcohol dehydrogenase GroES-like domain KQ251_RS00790 PF00107 Zinc-binding dehydrogenase KQ251_RS00795 PF01638 HxlR-like helix-turn-helix KQ251_RS00805 PF01396 Topoisomerase DNA binding C4 zinc finger KQ251_RS00805 PF01751 Toprim domain KQ251_RS00805 PF01131 DNA topoisomerase KQ251_RS00805 PF08272 Topoisomerase I zinc-ribbon-like KQ251_RS00820 PF00580 UvrD/REP helicase N-terminal domain KQ251_RS00820 PF13361 UvrD-like helicase C-terminal domain KQ251_RS00825 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) KQ251_RS00845 PF00999 Sodium/hydrogen exchanger family KQ251_RS00845 PF02254 TrkA-N domain KQ251_RS00850 PF00471 Ribosomal protein L33 KQ251_RS00855 PF00830 Ribosomal L28 family KQ251_RS00860 PF00171 Aldehyde dehydrogenase family KQ251_RS00870 PF01842 ACT domain KQ251_RS00870 PF00551 Formyl transferase KQ251_RS00880 PF01618 MotA/TolQ/ExbB proton channel family KQ251_RS00890 PF01625 Peptide methionine sulfoxide reductase KQ251_RS00900 PF00186 Dihydrofolate reductase KQ251_RS00905 PF00303 Thymidylate synthase KQ251_RS00920 PF01790 Prolipoprotein diacylglyceryl transferase KQ251_RS00940 PF00902 Sec-independent protein translocase protein (TatC) KQ251_RS00945 PF02416 mttA/Hcf106 family KQ251_RS00950 PF02416 mttA/Hcf106 family KQ251_RS00960 PF01725 Ham1 family KQ251_RS00970 PF07021 Methionine biosynthesis protein MetW KQ251_RS00970 PF00561 alpha/beta hydrolase fold KQ251_RS00975 PF00561 alpha/beta hydrolase fold KQ251_RS00980 PF00682 HMGL-like KQ251_RS00980 PF08502 LeuA allosteric (dimerisation) domain KQ251_RS00985 PF13640 2OG-Fe(II) oxygenase superfamily KQ251_RS00985 PF18331 PKHD-type hydroxylase C-terminal domain KQ251_RS00990 PF07715 TonB-dependent Receptor Plug Domain KQ251_RS00990 PF00593 TonB dependent receptor KQ251_RS00995 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KQ251_RS00995 PF05697 Bacterial trigger factor protein (TF) KQ251_RS00995 PF05698 Bacterial trigger factor protein (TF) C-terminus KQ251_RS01000 PF00574 Clp protease KQ251_RS01005 PF10431 C-terminal, D2-small domain, of ClpB protein KQ251_RS01005 PF07724 AAA domain (Cdc48 subfamily) KQ251_RS01005 PF06689 ClpX C4-type zinc finger KQ251_RS01020 PF05681 Fumarate hydratase (Fumerase) KQ251_RS01020 PF05683 Fumarase C-terminus KQ251_RS01025 PF07085 DRTGG domain KQ251_RS01025 PF01515 Phosphate acetyl/butaryl transferase KQ251_RS01030 PF00871 Acetokinase family KQ251_RS01035 PF00920 Dehydratase family KQ251_RS01040 PF01081 KDPG and KHG aldolase KQ251_RS01045 PF02447 GntP family permease KQ251_RS01050 PF01202 Shikimate kinase KQ251_RS01055 PF00171 Aldehyde dehydrogenase family KQ251_RS01060 PF00171 Aldehyde dehydrogenase family KQ251_RS01065 PF00561 alpha/beta hydrolase fold KQ251_RS01075 PF00933 Glycosyl hydrolase family 3 N terminal domain KQ251_RS01080 PF11818 C-terminal domain of tail specific protease (DUF3340) KQ251_RS01080 PF03572 Peptidase family S41 KQ251_RS01080 PF17804 Tail specific protease N-terminal domain KQ251_RS01080 PF00595 PDZ domain KQ251_RS01085 PF00534 Glycosyl transferases group 1 KQ251_RS01085 PF13439 Glycosyltransferase Family 4 KQ251_RS01090 PF01569 PAP2 superfamily KQ251_RS01095 PF04384 Iron-sulphur cluster assembly KQ251_RS01100 PF00334 Nucleoside diphosphate kinase KQ251_RS01105 PF04055 Radical SAM superfamily KQ251_RS01115 PF13464 Domain of unknown function (DUF4115) KQ251_RS01120 PF04551 GcpE protein KQ251_RS01125 PF13393 Histidyl-tRNA synthetase KQ251_RS01125 PF03129 Anticodon binding domain KQ251_RS01135 PF13360 PQQ-like domain KQ251_RS01140 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KQ251_RS01140 PF01926 50S ribosome-binding GTPase KQ251_RS01150 PF02556 Preprotein translocase subunit SecB KQ251_RS01155 PF00462 Glutaredoxin KQ251_RS01165 PF03193 RsgA GTPase KQ251_RS01170 PF00929 Exonuclease KQ251_RS01185 PF02321 Outer membrane efflux protein KQ251_RS01190 PF12704 MacB-like periplasmic core domain KQ251_RS01190 PF02687 FtsX-like permease family KQ251_RS01190 PF00005 ABC transporter KQ251_RS01195 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KQ251_RS01210 PF09334 tRNA synthetases class I (M) KQ251_RS01210 PF13603 Leucyl-tRNA synthetase, Domain 2 KQ251_RS01210 PF00133 tRNA synthetases class I (I, L, M and V) KQ251_RS01210 PF08264 Anticodon-binding domain of tRNA KQ251_RS01220 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KQ251_RS01220 PF00205 Thiamine pyrophosphate enzyme, central domain KQ251_RS01220 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KQ251_RS01225 PF10369 Small subunit of acetolactate synthase KQ251_RS01230 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KQ251_RS01230 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KQ251_RS01235 PF00990 Diguanylate cyclase, GGDEF domain KQ251_RS01235 PF03707 Bacterial signalling protein N terminal repeat KQ251_RS01235 PF00563 EAL domain KQ251_RS01255 PF16658 Class II release factor RF3, C-terminal domain KQ251_RS01255 PF03144 Elongation factor Tu domain 2 KQ251_RS01255 PF00009 Elongation factor Tu GTP binding domain KQ251_RS01270 PF01026 TatD related DNase KQ251_RS01275 PF00694 Aconitase C-terminal domain KQ251_RS01275 PF00330 Aconitase family (aconitate hydratase) KQ251_RS01285 PF00899 ThiF family KQ251_RS01295 PF03466 LysR substrate binding domain KQ251_RS01295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_RS01305 PF01207 Dihydrouridine synthase (Dus) KQ251_RS01310 PF07690 Major Facilitator Superfamily KQ251_RS01320 PF00892 EamA-like transporter family KQ251_RS01325 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KQ251_RS01325 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KQ251_RS01330 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch KQ251_RS01335 PF02233 NAD(P) transhydrogenase beta subunit KQ251_RS01340 PF00106 short chain dehydrogenase KQ251_RS01350 PF01261 Xylose isomerase-like TIM barrel KQ251_RS01355 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KQ251_RS01355 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KQ251_RS01360 PF00378 Enoyl-CoA hydratase/isomerase KQ251_RS01365 PF00672 HAMP domain KQ251_RS01365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ251_RS01365 PF00512 His Kinase A (phospho-acceptor) domain KQ251_RS01365 PF01627 Hpt domain KQ251_RS01365 PF00072 Response regulator receiver domain KQ251_RS01365 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KQ251_RS01370 PF00291 Pyridoxal-phosphate dependent enzyme KQ251_RS01380 PF05958 tRNA (Uracil-5-)-methyltransferase KQ251_RS01385 PF02824 TGS domain KQ251_RS01385 PF04607 Region found in RelA / SpoT proteins KQ251_RS01385 PF13291 ACT domain KQ251_RS01390 PF00106 short chain dehydrogenase KQ251_RS01395 PF03819 MazG nucleotide pyrophosphohydrolase domain KQ251_RS01405 PF12626 Polymerase A arginine-rich C-terminus KQ251_RS01405 PF12627 Probable RNA and SrmB- binding site of polymerase A KQ251_RS01405 PF01743 Poly A polymerase head domain KQ251_RS01410 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KQ251_RS01415 PF02548 Ketopantoate hydroxymethyltransferase KQ251_RS01420 PF02569 Pantoate-beta-alanine ligase KQ251_RS01425 PF03668 P-loop ATPase protein family KQ251_RS01430 PF00381 PTS HPr component phosphorylation site KQ251_RS01435 PF04751 Protein of unknown function (DUF615) KQ251_RS01440 PF00501 AMP-binding enzyme KQ251_RS01440 PF13193 AMP-binding enzyme C-terminal domain KQ251_RS01445 PF03129 Anticodon binding domain KQ251_RS01445 PF02824 TGS domain KQ251_RS01445 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KQ251_RS01445 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KQ251_RS01450 PF00707 Translation initiation factor IF-3, C-terminal domain KQ251_RS01450 PF05198 Translation initiation factor IF-3, N-terminal domain KQ251_RS01455 PF00043 Glutathione S-transferase, C-terminal domain KQ251_RS01455 PF02798 Glutathione S-transferase, N-terminal domain KQ251_RS01460 PF09335 SNARE associated Golgi protein KQ251_RS01465 PF07690 Major Facilitator Superfamily KQ251_RS01475 PF01632 Ribosomal protein L35 KQ251_RS01480 PF00453 Ribosomal protein L20 KQ251_RS01500 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain KQ251_RS01500 PF01409 tRNA synthetases class II core domain (F) KQ251_RS01505 PF03147 Ferredoxin-fold anticodon binding domain KQ251_RS01505 PF03484 tRNA synthetase B5 domain KQ251_RS01505 PF03483 B3/4 domain KQ251_RS01505 PF01588 Putative tRNA binding domain KQ251_RS01505 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain KQ251_RS01510 PF00216 Bacterial DNA-binding protein KQ251_RS01525 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KQ251_RS01525 PF07498 Rho termination factor, N-terminal domain KQ251_RS01525 PF07497 Rho termination factor, RNA-binding domain KQ251_RS01530 PF00085 Thioredoxin KQ251_RS01535 PF02541 Ppx/GppA phosphatase family KQ251_RS01540 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit KQ251_RS01545 PF01171 PP-loop family KQ251_RS01545 PF09179 TilS substrate binding domain KQ251_RS01545 PF11734 TilS substrate C-terminal domain KQ251_RS01550 PF03807 NADP oxidoreductase coenzyme F420-dependent KQ251_RS01550 PF14748 Pyrroline-5-carboxylate reductase dimerisation KQ251_RS01555 PF02325 YGGT family KQ251_RS01560 PF00476 DNA polymerase family A KQ251_RS01560 PF01612 3'-5' exonuclease KQ251_RS01560 PF01367 5'-3' exonuclease, C-terminal SAM fold KQ251_RS01560 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KQ251_RS01580 PF00437 Type II/IV secretion system protein KQ251_RS01585 PF02566 OsmC-like protein KQ251_RS01590 PF01047 MarR family KQ251_RS01600 PF00795 Carbon-nitrogen hydrolase KQ251_RS01645 PF00309 Sigma-54 factor, Activator interacting domain (AID) KQ251_RS01645 PF04552 Sigma-54, DNA binding domain KQ251_RS01645 PF04963 Sigma-54 factor, core binding domain KQ251_RS01650 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KQ251_RS01655 PF01722 BolA-like protein KQ251_RS01660 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KQ251_RS01665 PF01634 ATP phosphoribosyltransferase KQ251_RS01670 PF00815 Histidinol dehydrogenase KQ251_RS01675 PF00155 Aminotransferase class I and II KQ251_RS01680 PF04715 Anthranilate synthase component I, N terminal region KQ251_RS01680 PF00425 chorismate binding enzyme KQ251_RS01720 PF00293 NUDIX domain KQ251_RS01725 PF00132 Bacterial transferase hexapeptide (six repeats) KQ251_RS01730 PF00814 Glycoprotease family KQ251_RS01735 PF04445 Putative SAM-dependent methyltransferase KQ251_RS01745 PF00756 Putative esterase KQ251_RS01755 PF00834 Ribulose-phosphate 3 epimerase family KQ251_RS01770 PF00394 Multicopper oxidase KQ251_RS01770 PF07731 Multicopper oxidase KQ251_RS01770 PF07732 Multicopper oxidase KQ251_RS01775 PF05275 Copper resistance protein B precursor (CopB) KQ251_RS01785 PF00893 Small Multidrug Resistance protein KQ251_RS01790 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KQ251_RS01790 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KQ251_RS01795 PF01960 ArgJ family KQ251_RS01800 PF02445 Quinolinate synthetase A protein KQ251_RS01825 PF00962 Adenosine/AMP deaminase KQ251_RS01830 PF08240 Alcohol dehydrogenase GroES-like domain KQ251_RS01830 PF00107 Zinc-binding dehydrogenase KQ251_RS01835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_RS01835 PF03466 LysR substrate binding domain KQ251_RS01840 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ251_RS01840 PF02770 Acyl-CoA dehydrogenase, middle domain KQ251_RS01840 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ251_RS01845 PF07690 Major Facilitator Superfamily KQ251_RS01850 PF02515 CoA-transferase family III KQ251_RS01860 PF00890 FAD binding domain KQ251_RS01860 PF14537 Cytochrome c3 KQ251_RS01865 PF03466 LysR substrate binding domain KQ251_RS01865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_RS01875 PF07690 Major Facilitator Superfamily KQ251_RS01880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_RS01880 PF03466 LysR substrate binding domain KQ251_RS01920 PF08267 Cobalamin-independent synthase, N-terminal domain KQ251_RS01920 PF01717 Cobalamin-independent synthase, Catalytic domain KQ251_RS01925 PF01613 Flavin reductase like domain KQ251_RS01965 PF17074 Darcynin, domain of unknown function KQ251_RS01990 PF00665 Integrase core domain KQ251_RS01990 PF13936 Helix-turn-helix domain KQ251_RS01995 PF01011 PQQ enzyme repeat KQ251_RS02000 PF13737 Transposase DDE domain KQ251_RS02040 PF00145 C-5 cytosine-specific DNA methylase KQ251_RS02045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ251_RS02045 PF13188 PAS domain KQ251_RS02045 PF13426 PAS domain KQ251_RS02055 PF00268 Ribonucleotide reductase, small chain KQ251_RS02065 PF03477 ATP cone domain KQ251_RS02065 PF02867 Ribonucleotide reductase, barrel domain KQ251_RS02065 PF00317 Ribonucleotide reductase, all-alpha domain KQ251_RS02075 PF00072 Response regulator receiver domain KQ251_RS02075 PF00486 Transcriptional regulatory protein, C terminal KQ251_RS02080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ251_RS02080 PF00512 His Kinase A (phospho-acceptor) domain KQ251_RS02080 PF00672 HAMP domain KQ251_RS02090 PF00990 Diguanylate cyclase, GGDEF domain KQ251_RS02090 PF17151 Periplasmic sensor domain KQ251_RS02095 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 KQ251_RS02100 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit KQ251_RS02105 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit KQ251_RS02105 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit KQ251_RS02115 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region KQ251_RS02115 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit KQ251_RS02115 PF10531 SLBB domain KQ251_RS02120 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KQ251_RS02120 PF00384 Molybdopterin oxidoreductase KQ251_RS02120 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KQ251_RS02125 PF00146 NADH dehydrogenase KQ251_RS02130 PF12838 4Fe-4S dicluster domain KQ251_RS02135 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 KQ251_RS02140 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KQ251_RS02145 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KQ251_RS02145 PF00361 Proton-conducting membrane transporter KQ251_RS02150 PF00361 Proton-conducting membrane transporter KQ251_RS02155 PF00361 Proton-conducting membrane transporter KQ251_RS02165 PF00313 'Cold-shock' DNA-binding domain KQ251_RS02175 PF03466 LysR substrate binding domain KQ251_RS02175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_RS02180 PF00175 Oxidoreductase NAD-binding domain KQ251_RS02180 PF00970 Oxidoreductase FAD-binding domain KQ251_RS02195 PF05552 Conserved TM helix KQ251_RS02210 PF00291 Pyridoxal-phosphate dependent enzyme KQ251_RS02215 PF13533 Biotin-lipoyl like KQ251_RS02240 PF09334 tRNA synthetases class I (M) KQ251_RS02240 PF01588 Putative tRNA binding domain KQ251_RS02250 PF10609 NUBPL iron-transfer P-loop NTPase KQ251_RS02260 PF01048 Phosphorylase superfamily KQ251_RS02275 PF00692 dUTPase KQ251_RS02305 PF01207 Dihydrouridine synthase (Dus) KQ251_RS02315 PF00448 SRP54-type protein, GTPase domain KQ251_RS02315 PF02881 SRP54-type protein, helical bundle domain KQ251_RS02315 PF02978 Signal peptide binding domain KQ251_RS02320 PF03309 Type III pantothenate kinase KQ251_RS02330 PF01925 Sulfite exporter TauE/SafE KQ251_RS02340 PF02463 RecF/RecN/SMC N terminal domain KQ251_RS02340 PF06470 SMC proteins Flexible Hinge Domain KQ251_RS02350 PF01653 NAD-dependent DNA ligase adenylation domain KQ251_RS02350 PF03120 NAD-dependent DNA ligase OB-fold domain KQ251_RS02350 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KQ251_RS02350 PF12826 Helix-hairpin-helix motif KQ251_RS02350 PF00533 BRCA1 C Terminus (BRCT) domain KQ251_RS02355 PF00210 Ferritin-like domain KQ251_RS02360 PF07690 Major Facilitator Superfamily KQ251_RS02365 PF00982 Glycosyltransferase family 20 KQ251_RS02370 PF02358 Trehalose-phosphatase KQ251_RS02375 PF12697 Alpha/beta hydrolase family KQ251_RS02375 PF08241 Methyltransferase domain KQ251_RS02380 PF06968 Biotin and Thiamin Synthesis associated domain KQ251_RS02380 PF04055 Radical SAM superfamily KQ251_RS02380 PF00202 Aminotransferase class-III KQ251_RS02385 PF00155 Aminotransferase class I and II KQ251_RS02400 PF01479 S4 domain KQ251_RS02400 PF00849 RNA pseudouridylate synthase KQ251_RS02405 PF04079 Segregation and condensation complex subunit ScpB KQ251_RS02410 PF02616 Segregation and condensation protein ScpA KQ251_RS02415 PF01300 Telomere recombination KQ251_RS02420 PF04315 Elongation factor P hydroxylase KQ251_RS02425 PF02620 Large ribosomal RNA subunit accumulation protein YceD KQ251_RS02430 PF01783 Ribosomal L32p protein family KQ251_RS02435 PF00698 Acyl transferase domain KQ251_RS02445 PF00550 Phosphopantetheine attachment site KQ251_RS02450 PF01476 LysM domain KQ251_RS02450 PF04972 BON domain KQ251_RS02455 PF03070 TENA/THI-4/PQQC family KQ251_RS02455 PF08543 Phosphomethylpyrimidine kinase KQ251_RS02455 PF02581 Thiamine monophosphate synthase KQ251_RS02465 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KQ251_RS02480 PF02261 Aspartate decarboxylase KQ251_RS02485 PF01195 Peptidyl-tRNA hydrolase KQ251_RS02490 PF01386 Ribosomal L25p family KQ251_RS02495 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KQ251_RS02495 PF14572 Phosphoribosyl synthetase-associated domain KQ251_RS02520 PF08544 GHMP kinases C terminal KQ251_RS02520 PF00288 GHMP kinases N terminal domain KQ251_RS02525 PF03550 Outer membrane lipoprotein LolB KQ251_RS02535 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain KQ251_RS02535 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain KQ251_RS02535 PF01488 Shikimate / quinate 5-dehydrogenase KQ251_RS02540 PF10410 DnaB-helicase binding domain of primase KQ251_RS02540 PF08278 DNA primase DnaG DnaB-binding KQ251_RS02540 PF08275 DNA primase catalytic core, N-terminal domain KQ251_RS02540 PF01807 CHC2 zinc finger KQ251_RS02545 PF13525 Outer membrane lipoprotein KQ251_RS02550 PF00849 RNA pseudouridylate synthase KQ251_RS02550 PF01479 S4 domain KQ251_RS02555 PF02578 Multi-copper polyphenol oxidoreductase laccase KQ251_RS02560 PF03358 NADPH-dependent FMN reductase KQ251_RS02565 PF01668 SmpB protein KQ251_RS02570 PF01467 Cytidylyltransferase-like KQ251_RS02575 PF00037 4Fe-4S binding domain KQ251_RS02595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_RS02595 PF03466 LysR substrate binding domain KQ251_RS02600 PF00180 Isocitrate/isopropylmalate dehydrogenase KQ251_RS02605 PF02028 BCCT, betaine/carnitine/choline family transporter KQ251_RS02610 PF07859 alpha/beta hydrolase fold KQ251_RS02615 PF00355 Rieske [2Fe-2S] domain KQ251_RS02615 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KQ251_RS02620 PF00171 Aldehyde dehydrogenase family KQ251_RS02625 PF00970 Oxidoreductase FAD-binding domain KQ251_RS02625 PF00111 2Fe-2S iron-sulfur cluster binding domain KQ251_RS02625 PF00175 Oxidoreductase NAD-binding domain KQ251_RS02640 PF00795 Carbon-nitrogen hydrolase KQ251_RS02640 PF02540 NAD synthase KQ251_RS02650 PF02678 Pirin KQ251_RS02650 PF05726 Pirin C-terminal cupin domain KQ251_RS02655 PF03653 Uncharacterised protein family (UPF0093) KQ251_RS02660 PF00109 Beta-ketoacyl synthase, N-terminal domain KQ251_RS02660 PF02801 Beta-ketoacyl synthase, C-terminal domain KQ251_RS02670 PF00164 Ribosomal protein S12/S23 KQ251_RS02675 PF00177 Ribosomal protein S7p/S5e KQ251_RS02680 PF00679 Elongation factor G C-terminus KQ251_RS02680 PF14492 Elongation Factor G, domain II KQ251_RS02680 PF03764 Elongation factor G, domain IV KQ251_RS02680 PF00009 Elongation factor Tu GTP binding domain KQ251_RS02680 PF03144 Elongation factor Tu domain 2 KQ251_RS02685 PF00009 Elongation factor Tu GTP binding domain KQ251_RS02685 PF03144 Elongation factor Tu domain 2 KQ251_RS02685 PF03143 Elongation factor Tu C-terminal domain KQ251_RS02700 PF00583 Acetyltransferase (GNAT) family KQ251_RS02705 PF04376 Arginine-tRNA-protein transferase, N terminus KQ251_RS02705 PF04377 Arginine-tRNA-protein transferase, C terminus KQ251_RS02710 PF03588 Leucyl/phenylalanyl-tRNA protein transferase KQ251_RS02715 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ251_RS02720 PF01580 FtsK/SpoIIIE family KQ251_RS02720 PF09397 Ftsk gamma domain KQ251_RS02720 PF17854 FtsK alpha domain KQ251_RS02720 PF13491 4TM region of DNA translocase FtsK/SpoIIIE KQ251_RS02725 PF01810 LysE type translocator KQ251_RS02735 PF03776 Septum formation topological specificity factor MinE KQ251_RS02740 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KQ251_RS02745 PF03775 Septum formation inhibitor MinC, C-terminal domain KQ251_RS02755 PF01553 Acyltransferase KQ251_RS02760 PF13488 Glycine zipper KQ251_RS02760 PF00691 OmpA family KQ251_RS02765 PF00580 UvrD/REP helicase N-terminal domain KQ251_RS02765 PF13361 UvrD-like helicase C-terminal domain KQ251_RS02770 PF00692 dUTPase KQ251_RS02775 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KQ251_RS02775 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KQ251_RS02775 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KQ251_RS02775 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KQ251_RS02780 PF00696 Amino acid kinase family KQ251_RS02790 PF13230 Glutamine amidotransferases class-II KQ251_RS02795 PF01814 Hemerythrin HHE cation binding domain KQ251_RS02805 PF03658 RnfH family Ubiquitin KQ251_RS02810 PF04355 SmpA / OmlA family KQ251_RS02815 PF01475 Ferric uptake regulator family KQ251_RS02820 PF00437 Type II/IV secretion system protein KQ251_RS02825 PF00437 Type II/IV secretion system protein KQ251_RS02830 PF01168 Alanine racemase, N-terminal domain KQ251_RS02840 PF00149 Calcineurin-like phosphoesterase KQ251_RS02840 PF12320 Type 5 capsule protein repressor C-terminal domain KQ251_RS02860 PF08338 Domain of unknown function (DUF1731) KQ251_RS02860 PF01370 NAD dependent epimerase/dehydratase family KQ251_RS02865 PF01266 FAD dependent oxidoreductase KQ251_RS02870 PF00490 Delta-aminolevulinic acid dehydratase KQ251_RS02875 PF03061 Thioesterase superfamily KQ251_RS02880 PF13533 Biotin-lipoyl like KQ251_RS02885 PF07690 Major Facilitator Superfamily KQ251_RS02935 PF00929 Exonuclease KQ251_RS03010 PF00145 C-5 cytosine-specific DNA methylase KQ251_RS03020 PF01695 IstB-like ATP binding protein KQ251_RS03215 PF05016 ParE toxin of type II toxin-antitoxin system, parDE KQ251_RS03255 PF02767 DNA polymerase III beta subunit, central domain KQ251_RS03255 PF00712 DNA polymerase III beta subunit, N-terminal domain KQ251_RS03255 PF02768 DNA polymerase III beta subunit, C-terminal domain KQ251_RS03340 PF13438 Domain of unknown function (DUF4113) KQ251_RS03340 PF11798 IMS family HHH motif KQ251_RS03340 PF11799 impB/mucB/samB family C-terminal domain KQ251_RS03340 PF00817 impB/mucB/samB family KQ251_RS03345 PF00717 Peptidase S24-like KQ251_RS03360 PF13356 Arm DNA-binding domain KQ251_RS03360 PF00589 Phage integrase family KQ251_RS03405 PF00436 Single-strand binding protein family KQ251_RS03470 PF00083 Sugar (and other) transporter KQ251_RS03475 PF00701 Dihydrodipicolinate synthetase family KQ251_RS03485 PF08281 Sigma-70, region 4 KQ251_RS03485 PF04542 Sigma-70 region 2 KQ251_RS03495 PF00593 TonB dependent receptor KQ251_RS03495 PF07715 TonB-dependent Receptor Plug Domain KQ251_RS03505 PF04575 Protein of unknown function (DUF560) KQ251_RS03515 PF01126 Heme oxygenase KQ251_RS03540 PF13520 Amino acid permease KQ251_RS03545 PF02574 Homocysteine S-methyltransferase KQ251_RS03555 PF06039 Malate:quinone oxidoreductase (Mqo) KQ251_RS03560 PF00732 GMC oxidoreductase KQ251_RS03560 PF05199 GMC oxidoreductase KQ251_RS03565 PF00171 Aldehyde dehydrogenase family KQ251_RS03570 PF00440 Bacterial regulatory proteins, tetR family KQ251_RS03570 PF13977 BetI-type transcriptional repressor, C-terminal KQ251_RS03575 PF02028 BCCT, betaine/carnitine/choline family transporter KQ251_RS03580 PF02028 BCCT, betaine/carnitine/choline family transporter KQ251_RS03590 PF03061 Thioesterase superfamily KQ251_RS03600 PF07683 Cobalamin synthesis protein cobW C-terminal domain KQ251_RS03600 PF02492 CobW/HypB/UreG, nucleotide-binding domain KQ251_RS03605 PF00375 Sodium:dicarboxylate symporter family KQ251_RS03610 PF07152 YaeQ protein KQ251_RS03615 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KQ251_RS03620 PF14883 Hypothetical glycosyl hydrolase family 13 KQ251_RS03620 PF01522 Polysaccharide deacetylase KQ251_RS03625 PF00535 Glycosyl transferase family 2 KQ251_RS03635 PF00378 Enoyl-CoA hydratase/isomerase KQ251_RS03650 PF09339 IclR helix-turn-helix domain KQ251_RS03650 PF01614 Bacterial transcriptional regulator KQ251_RS03655 PF00355 Rieske [2Fe-2S] domain KQ251_RS03665 PF00355 Rieske [2Fe-2S] domain KQ251_RS03675 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KQ251_RS03680 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ251_RS03680 PF14759 Reductase C-terminal KQ251_RS03685 PF07690 Major Facilitator Superfamily KQ251_RS03695 PF12697 Alpha/beta hydrolase family KQ251_RS03705 PF03447 Homoserine dehydrogenase, NAD binding domain KQ251_RS03705 PF01958 Domain of unknown function DUF108 KQ251_RS03710 PF00171 Aldehyde dehydrogenase family KQ251_RS03715 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KQ251_RS03715 PF00205 Thiamine pyrophosphate enzyme, central domain KQ251_RS03715 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KQ251_RS03725 PF07690 Major Facilitator Superfamily KQ251_RS03730 PF01327 Polypeptide deformylase KQ251_RS03735 PF04960 Glutaminase KQ251_RS03740 PF02311 AraC-like ligand binding domain KQ251_RS03740 PF12833 Helix-turn-helix domain KQ251_RS03745 PF07690 Major Facilitator Superfamily KQ251_RS03750 PF01263 Aldose 1-epimerase KQ251_RS03760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_RS03760 PF03466 LysR substrate binding domain KQ251_RS03770 PF07690 Major Facilitator Superfamily KQ251_RS03775 PF00456 Transketolase, thiamine diphosphate binding domain KQ251_RS03780 PF02779 Transketolase, pyrimidine binding domain KQ251_RS03780 PF02780 Transketolase, C-terminal domain KQ251_RS03785 PF00809 Pterin binding enzyme KQ251_RS03785 PF02574 Homocysteine S-methyltransferase KQ251_RS03785 PF02607 B12 binding domain KQ251_RS03785 PF02310 B12 binding domain KQ251_RS03785 PF02965 Vitamin B12 dependent methionine synthase, activation domain KQ251_RS03790 PF01384 Phosphate transporter family KQ251_RS03795 PF00291 Pyridoxal-phosphate dependent enzyme KQ251_RS03810 PF03781 Sulfatase-modifying factor enzyme 1 KQ251_RS03815 PF00884 Sulfatase KQ251_RS03825 PF01521 Iron-sulphur cluster biosynthesis KQ251_RS03825 PF01106 NifU-like domain KQ251_RS03830 PF07715 TonB-dependent Receptor Plug Domain KQ251_RS03830 PF00593 TonB dependent receptor KQ251_RS03840 PF00561 alpha/beta hydrolase fold KQ251_RS03845 PF00484 Carbonic anhydrase KQ251_RS03850 PF13472 GDSL-like Lipase/Acylhydrolase family KQ251_RS03855 PF00005 ABC transporter KQ251_RS03865 PF01694 Rhomboid family KQ251_RS03870 PF00912 Transglycosylase KQ251_RS03875 PF02503 Polyphosphate kinase middle domain KQ251_RS03875 PF13090 Polyphosphate kinase C-terminal domain 2 KQ251_RS03875 PF17941 Polyphosphate kinase C-terminal domain 1 KQ251_RS03875 PF13089 Polyphosphate kinase N-terminal domain KQ251_RS03890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_RS03890 PF03466 LysR substrate binding domain KQ251_RS03895 PF00561 alpha/beta hydrolase fold KQ251_RS03900 PF18113 Rubredoxin binding C-terminal domain KQ251_RS03900 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ251_RS03905 PF00301 Rubredoxin KQ251_RS03920 PF00152 tRNA synthetases class II (D, K and N) KQ251_RS03920 PF01336 OB-fold nucleic acid binding domain KQ251_RS03925 PF14052 Capsule assembly protein Wzi KQ251_RS03935 PF01507 Phosphoadenosine phosphosulfate reductase family KQ251_RS03940 PF00009 Elongation factor Tu GTP binding domain KQ251_RS03955 PF03600 Citrate transporter KQ251_RS03960 PF01595 Cyclin M transmembrane N-terminal domain KQ251_RS03960 PF00571 CBS domain KQ251_RS03960 PF03471 Transporter associated domain KQ251_RS03965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_RS03965 PF03466 LysR substrate binding domain KQ251_RS03970 PF00463 Isocitrate lyase family KQ251_RS03985 PF01774 UreD urease accessory protein KQ251_RS03990 PF00547 Urease, gamma subunit KQ251_RS03995 PF00699 Urease beta subunit KQ251_RS04000 PF01979 Amidohydrolase family KQ251_RS04000 PF00449 Urease alpha-subunit, N-terminal domain KQ251_RS04005 PF02814 UreE urease accessory protein, N-terminal domain KQ251_RS04005 PF05194 UreE urease accessory protein, C-terminal domain KQ251_RS04010 PF01730 UreF KQ251_RS04015 PF02492 CobW/HypB/UreG, nucleotide-binding domain KQ251_RS04030 PF03717 Penicillin-binding Protein dimerisation domain KQ251_RS04030 PF00905 Penicillin binding protein transpeptidase domain KQ251_RS04045 PF05191 Adenylate kinase, active site lid KQ251_RS04055 PF10576 Iron-sulfur binding domain of endonuclease III KQ251_RS04055 PF00633 Helix-hairpin-helix motif KQ251_RS04055 PF00730 HhH-GPD superfamily base excision DNA repair protein KQ251_RS04060 PF04060 Putative Fe-S cluster KQ251_RS04065 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KQ251_RS04065 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KQ251_RS04075 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase KQ251_RS04080 PF02590 Predicted SPOUT methyltransferase KQ251_RS04085 PF05362 Lon protease (S16) C-terminal proteolytic domain KQ251_RS04085 PF00004 ATPase family associated with various cellular activities (AAA) KQ251_RS04085 PF02190 ATP-dependent protease La (LON) substrate-binding domain KQ251_RS04090 PF13018 Extended Signal Peptide of Type V secretion system KQ251_RS04090 PF03895 YadA-like membrane anchor domain KQ251_RS04090 PF05658 Head domain of trimeric autotransporter adhesin KQ251_RS04090 PF05662 Coiled stalk of trimeric autotransporter adhesin KQ251_RS04095 PF00691 OmpA family KQ251_RS04095 PF04355 SmpA / OmlA family KQ251_RS04100 PF01812 5-formyltetrahydrofolate cyclo-ligase family KQ251_RS04205 PF00772 DnaB-like helicase N terminal domain KQ251_RS04205 PF03796 DnaB-like helicase C terminal domain KQ251_RS04210 PF00145 C-5 cytosine-specific DNA methylase KQ251_RS04305 PF06381 Protein of unknown function (DUF1073) KQ251_RS04325 PF09979 Uncharacterized protein conserved in bacteria (DUF2213) KQ251_RS04435 PF11799 impB/mucB/samB family C-terminal domain KQ251_RS04435 PF13438 Domain of unknown function (DUF4113) KQ251_RS04435 PF00817 impB/mucB/samB family KQ251_RS04440 PF00717 Peptidase S24-like KQ251_RS04445 PF13356 Arm DNA-binding domain KQ251_RS04445 PF00589 Phage integrase family KQ251_RS04455 PF00854 POT family KQ251_RS04460 PF00120 Glutamine synthetase, catalytic domain KQ251_RS04460 PF03951 Glutamine synthetase, beta-Grasp domain KQ251_RS04465 PF04345 Chorismate lyase KQ251_RS04470 PF01040 UbiA prenyltransferase family KQ251_RS04505 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KQ251_RS04505 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KQ251_RS04510 PF01784 NIF3 (NGG1p interacting factor 3) KQ251_RS04515 PF13180 PDZ domain KQ251_RS04520 PF12627 Probable RNA and SrmB- binding site of polymerase A KQ251_RS04520 PF01743 Poly A polymerase head domain KQ251_RS04525 PF00390 Malic enzyme, N-terminal domain KQ251_RS04525 PF03949 Malic enzyme, NAD binding domain KQ251_RS04525 PF01515 Phosphate acetyl/butaryl transferase KQ251_RS04530 PF00563 EAL domain KQ251_RS04530 PF00990 Diguanylate cyclase, GGDEF domain KQ251_RS04530 PF03707 Bacterial signalling protein N terminal repeat KQ251_RS04535 PF04452 RNA methyltransferase KQ251_RS04540 PF02219 Methylenetetrahydrofolate reductase KQ251_RS04545 PF05221 S-adenosyl-L-homocysteine hydrolase KQ251_RS04545 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KQ251_RS04560 PF09317 Domain of unknown function (DUF1974) KQ251_RS04560 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ251_RS04560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ251_RS04565 PF04055 Radical SAM superfamily KQ251_RS04570 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KQ251_RS04570 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ251_RS04580 PF07690 Major Facilitator Superfamily KQ251_RS04590 PF00557 Metallopeptidase family M24 KQ251_RS04595 PF00318 Ribosomal protein S2 KQ251_RS04600 PF00889 Elongation factor TS KQ251_RS04610 PF12833 Helix-turn-helix domain KQ251_RS04630 PF03330 Lytic transglycolase KQ251_RS04630 PF05036 Sporulation related domain KQ251_RS04635 PF13406 Transglycosylase SLT domain KQ251_RS04640 PF01098 Cell cycle protein KQ251_RS04650 PF14489 QueF-like protein KQ251_RS04650 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term KQ251_RS04655 PF01061 ABC-2 type transporter KQ251_RS04660 PF00005 ABC transporter KQ251_RS04690 PF00464 Serine hydroxymethyltransferase KQ251_RS04695 PF02321 Outer membrane efflux protein KQ251_RS04700 PF00873 AcrB/AcrD/AcrF family KQ251_RS04705 PF13533 Biotin-lipoyl like KQ251_RS04710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_RS04710 PF03466 LysR substrate binding domain KQ251_RS04715 PF00497 Bacterial extracellular solute-binding proteins, family 3 KQ251_RS04720 PF00528 Binding-protein-dependent transport system inner membrane component KQ251_RS04725 PF00528 Binding-protein-dependent transport system inner membrane component KQ251_RS04730 PF00005 ABC transporter KQ251_RS04735 PF00893 Small Multidrug Resistance protein KQ251_RS04740 PF00037 4Fe-4S binding domain KQ251_RS04745 PF01136 Peptidase family U32 KQ251_RS04745 PF16325 Peptidase family U32 C-terminal domain KQ251_RS04750 PF00392 Bacterial regulatory proteins, gntR family KQ251_RS04750 PF00155 Aminotransferase class I and II KQ251_RS04755 PF02567 Phenazine biosynthesis-like protein KQ251_RS04760 PF00175 Oxidoreductase NAD-binding domain KQ251_RS04760 PF00970 Oxidoreductase FAD-binding domain KQ251_RS04765 PF18389 TrmO C-terminal domain KQ251_RS04765 PF01980 tRNA-methyltransferase O KQ251_RS04775 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KQ251_RS04775 PF00437 Type II/IV secretion system protein KQ251_RS04785 PF00486 Transcriptional regulatory protein, C terminal KQ251_RS04785 PF00072 Response regulator receiver domain KQ251_RS04790 PF00512 His Kinase A (phospho-acceptor) domain KQ251_RS04790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ251_RS04790 PF08521 Two-component sensor kinase N-terminal KQ251_RS04800 PF00293 NUDIX domain KQ251_RS04810 PF00912 Transglycosylase KQ251_RS04810 PF00905 Penicillin binding protein transpeptidase domain KQ251_RS04810 PF14814 Bifunctional transglycosylase second domain KQ251_RS04815 PF01513 ATP-NAD kinase KQ251_RS04820 PF07023 Protein of unknown function (DUF1315) KQ251_RS04825 PF00591 Glycosyl transferase family, a/b domain KQ251_RS04825 PF02885 Glycosyl transferase family, helical bundle domain KQ251_RS04830 PF00375 Sodium:dicarboxylate symporter family KQ251_RS04835 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ251_RS04835 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ251_RS04835 PF02770 Acyl-CoA dehydrogenase, middle domain KQ251_RS04845 PF00800 Prephenate dehydratase KQ251_RS04845 PF01842 ACT domain KQ251_RS04845 PF01817 Chorismate mutase type II KQ251_RS04850 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KQ251_RS04860 PF01546 Peptidase family M20/M25/M40 KQ251_RS04860 PF07687 Peptidase dimerisation domain KQ251_RS04865 PF00753 Metallo-beta-lactamase superfamily KQ251_RS04880 PF13737 Transposase DDE domain KQ251_RS04895 PF05690 Thiazole biosynthesis protein ThiG KQ251_RS04905 PF04241 Protein of unknown function (DUF423) KQ251_RS04910 PF04542 Sigma-70 region 2 KQ251_RS04910 PF04545 Sigma-70, region 4 KQ251_RS04910 PF00140 Sigma-70 factor, region 1.2 KQ251_RS04925 PF00313 'Cold-shock' DNA-binding domain KQ251_RS04930 PF00270 DEAD/DEAH box helicase KQ251_RS04930 PF00271 Helicase conserved C-terminal domain KQ251_RS04940 PF00881 Nitroreductase family KQ251_RS04945 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus KQ251_RS04945 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KQ251_RS04965 PF01180 Dihydroorotate dehydrogenase KQ251_RS04970 PF02674 Colicin V production protein KQ251_RS04975 PF00156 Phosphoribosyl transferase domain KQ251_RS04990 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KQ251_RS04990 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KQ251_RS04995 PF01435 Peptidase family M48 KQ251_RS05000 PF09424 Yqey-like protein KQ251_RS05005 PF01165 Ribosomal protein S21 KQ251_RS05010 PF00814 Glycoprotease family KQ251_RS05030 PF00069 Protein kinase domain KQ251_RS05055 PF08479 POTRA domain, ShlB-type KQ251_RS05055 PF17287 POTRA domain KQ251_RS05055 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB KQ251_RS05060 PF13018 Extended Signal Peptide of Type V secretion system KQ251_RS05060 PF13332 Hemagglutinin repeat KQ251_RS05060 PF05860 haemagglutination activity domain KQ251_RS05060 PF04829 Pre-toxin domain with VENN motif KQ251_RS05080 PF13737 Transposase DDE domain KQ251_RS05090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_RS05090 PF03466 LysR substrate binding domain KQ251_RS05095 PF00202 Aminotransferase class-III KQ251_RS05100 PF00171 Aldehyde dehydrogenase family KQ251_RS05105 PF00324 Amino acid permease KQ251_RS05135 PF04076 Bacterial OB fold (BOF) protein KQ251_RS05160 PF00561 alpha/beta hydrolase fold KQ251_RS05165 PF03616 Sodium/glutamate symporter KQ251_RS05175 PF07729 FCD domain KQ251_RS05175 PF00392 Bacterial regulatory proteins, gntR family KQ251_RS05220 PF00083 Sugar (and other) transporter KQ251_RS05220 PF08946 Osmosensory transporter coiled coil KQ251_RS05245 PF04403 Paraquat-inducible protein A KQ251_RS05250 PF02470 MlaD protein KQ251_RS05265 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ251_RS05265 PF00085 Thioredoxin KQ251_RS05270 PF01177 Asp/Glu/Hydantoin racemase KQ251_RS05275 PF00892 EamA-like transporter family KQ251_RS05280 PF07995 Glucose / Sorbosone dehydrogenase KQ251_RS05300 PF00375 Sodium:dicarboxylate symporter family KQ251_RS05310 PF00753 Metallo-beta-lactamase superfamily KQ251_RS05310 PF16123 Hydroxyacylglutathione hydrolase C-terminus KQ251_RS05315 PF00528 Binding-protein-dependent transport system inner membrane component KQ251_RS05320 PF00005 ABC transporter KQ251_RS05320 PF09383 NIL domain KQ251_RS05325 PF03180 NLPA lipoprotein KQ251_RS05330 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KQ251_RS05330 PF02843 Phosphoribosylglycinamide synthetase, C domain KQ251_RS05330 PF02844 Phosphoribosylglycinamide synthetase, N domain KQ251_RS05335 PF02142 MGS-like domain KQ251_RS05335 PF01808 AICARFT/IMPCHase bienzyme KQ251_RS05340 PF02954 Bacterial regulatory protein, Fis family KQ251_RS05360 PF01134 Glucose inhibited division protein A KQ251_RS05360 PF13932 GidA associated domain KQ251_RS05370 PF14403 Circularly permuted ATP-grasp type 2 KQ251_RS05380 PF08379 Bacterial transglutaminase-like N-terminal region KQ251_RS05380 PF01841 Transglutaminase-like superfamily KQ251_RS05390 PF01168 Alanine racemase, N-terminal domain KQ251_RS05390 PF00842 Alanine racemase, C-terminal domain KQ251_RS05395 PF00772 DnaB-like helicase N terminal domain KQ251_RS05395 PF03796 DnaB-like helicase C terminal domain KQ251_RS05400 PF03948 Ribosomal protein L9, C-terminal domain KQ251_RS05400 PF01281 Ribosomal protein L9, N-terminal domain KQ251_RS05405 PF01084 Ribosomal protein S18 KQ251_RS05410 PF01250 Ribosomal protein S6 KQ251_RS05415 PF01040 UbiA prenyltransferase family KQ251_RS05420 PF03626 Prokaryotic Cytochrome C oxidase subunit IV KQ251_RS05425 PF00510 Cytochrome c oxidase subunit III KQ251_RS05430 PF00115 Cytochrome C and Quinol oxidase polypeptide I KQ251_RS05435 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KQ251_RS05435 PF06481 COX Aromatic Rich Motif KQ251_RS05445 PF00391 PEP-utilising enzyme, mobile domain KQ251_RS05445 PF02896 PEP-utilising enzyme, TIM barrel domain KQ251_RS05445 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KQ251_RS05450 PF03618 Kinase/pyrophosphorylase KQ251_RS05460 PF01522 Polysaccharide deacetylase KQ251_RS05460 PF14883 Hypothetical glycosyl hydrolase family 13 KQ251_RS05465 PF00535 Glycosyl transferase family 2 KQ251_RS05470 PF13994 PgaD-like protein KQ251_RS05480 PF00296 Luciferase-like monooxygenase KQ251_RS05495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_RS05495 PF03466 LysR substrate binding domain KQ251_RS05505 PF03462 PCRF domain KQ251_RS05505 PF00472 RF-1 domain KQ251_RS05510 PF13847 Methyltransferase domain KQ251_RS05510 PF17827 PrmC N-terminal domain KQ251_RS05515 PF12833 Helix-turn-helix domain KQ251_RS05520 PF00106 short chain dehydrogenase KQ251_RS05525 PF02770 Acyl-CoA dehydrogenase, middle domain KQ251_RS05525 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ251_RS05525 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ251_RS05530 PF13193 AMP-binding enzyme C-terminal domain KQ251_RS05530 PF00501 AMP-binding enzyme KQ251_RS05535 PF01613 Flavin reductase like domain KQ251_RS05540 PF00899 ThiF family KQ251_RS05545 PF03109 ABC1 family KQ251_RS05560 PF03814 Potassium-transporting ATPase A subunit KQ251_RS05570 PF02669 K+-transporting ATPase, c chain KQ251_RS05575 PF13493 Domain of unknown function (DUF4118) KQ251_RS05575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ251_RS05575 PF00512 His Kinase A (phospho-acceptor) domain KQ251_RS05575 PF02702 Osmosensitive K+ channel His kinase sensor domain KQ251_RS05580 PF00072 Response regulator receiver domain KQ251_RS05580 PF00486 Transcriptional regulatory protein, C terminal KQ251_RS05585 PF00120 Glutamine synthetase, catalytic domain KQ251_RS05595 PF03232 Ubiquinone biosynthesis protein COQ7 KQ251_RS05600 PF07690 Major Facilitator Superfamily KQ251_RS05605 PF17243 POTRA domain TamA domain 1 KQ251_RS05605 PF01103 Surface antigen KQ251_RS05605 PF07244 Surface antigen variable number repeat KQ251_RS05620 PF00330 Aconitase family (aconitate hydratase) KQ251_RS05620 PF06434 Aconitate hydratase 2 N-terminus KQ251_RS05620 PF11791 Aconitate B N-terminal domain KQ251_RS05630 PF00520 Ion transport protein KQ251_RS05630 PF00027 Cyclic nucleotide-binding domain KQ251_RS05635 PF07690 Major Facilitator Superfamily KQ251_RS05650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_RS05650 PF03466 LysR substrate binding domain KQ251_RS05655 PF04284 Protein of unknown function (DUF441) KQ251_RS05665 PF00849 RNA pseudouridylate synthase KQ251_RS05665 PF01479 S4 domain KQ251_RS05680 PF00849 RNA pseudouridylate synthase KQ251_RS05680 PF01479 S4 domain KQ251_RS05685 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE KQ251_RS05690 PF01119 DNA mismatch repair protein, C-terminal domain KQ251_RS05690 PF08676 MutL C terminal dimerisation domain KQ251_RS05700 PF17209 Hfq protein KQ251_RS05710 PF00881 Nitroreductase family KQ251_RS05720 PF00149 Calcineurin-like phosphoesterase KQ251_RS05725 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KQ251_RS05730 PF00749 tRNA synthetases class I (E and Q), catalytic domain KQ251_RS05730 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain KQ251_RS05735 PF00117 Glutamine amidotransferase class-I KQ251_RS05735 PF00958 GMP synthase C terminal domain KQ251_RS05735 PF02540 NAD synthase KQ251_RS05740 PF05985 Ethanolamine ammonia-lyase light chain (EutC) KQ251_RS05745 PF06751 Ethanolamine ammonia lyase large subunit (EutB) KQ251_RS05750 PF13520 Amino acid permease KQ251_RS05755 PF00171 Aldehyde dehydrogenase family KQ251_RS05770 PF00465 Iron-containing alcohol dehydrogenase KQ251_RS05775 PF05970 PIF1-like helicase KQ251_RS05775 PF14493 Helix-turn-helix domain KQ251_RS05785 PF02110 Hydroxyethylthiazole kinase family KQ251_RS05800 PF01433 Peptidase family M1 domain KQ251_RS05800 PF17432 Domain of unknown function (DUF3458_C) ARM repeats KQ251_RS05800 PF11940 Domain of unknown function (DUF3458) Ig-like fold KQ251_RS05815 PF00577 Outer membrane usher protein KQ251_RS05815 PF13954 PapC N-terminal domain KQ251_RS05815 PF13953 PapC C-terminal domain KQ251_RS05830 PF13817 IS66 C-terminal element KQ251_RS05830 PF13005 zinc-finger binding domain of transposase IS66 KQ251_RS05830 PF13007 Transposase C of IS166 homeodomain KQ251_RS05830 PF03050 Transposase IS66 family KQ251_RS05860 PF01817 Chorismate mutase type II KQ251_RS05865 PF01037 Lrp/AsnC ligand binding domain KQ251_RS05880 PF00440 Bacterial regulatory proteins, tetR family KQ251_RS05885 PF00593 TonB dependent receptor KQ251_RS05885 PF07715 TonB-dependent Receptor Plug Domain KQ251_RS05890 PF00924 Mechanosensitive ion channel KQ251_RS05920 PF00593 TonB dependent receptor KQ251_RS05920 PF07715 TonB-dependent Receptor Plug Domain KQ251_RS05940 PF12848 ABC transporter KQ251_RS05940 PF00005 ABC transporter KQ251_RS05945 PF00582 Universal stress protein family KQ251_RS05965 PF00689 Cation transporting ATPase, C-terminus KQ251_RS05965 PF00690 Cation transporter/ATPase, N-terminus KQ251_RS05970 PF02308 MgtC family KQ251_RS05980 PF13936 Helix-turn-helix domain KQ251_RS05980 PF00665 Integrase core domain KQ251_RS05990 PF01037 Lrp/AsnC ligand binding domain KQ251_RS05995 PF01810 LysE type translocator KQ251_RS06000 PF00923 Transaldolase/Fructose-6-phosphate aldolase KQ251_RS06005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_RS06005 PF03466 LysR substrate binding domain KQ251_RS06015 PF02803 Thiolase, C-terminal domain KQ251_RS06015 PF00108 Thiolase, N-terminal domain KQ251_RS06025 PF01575 MaoC like domain KQ251_RS06030 PF00144 Beta-lactamase KQ251_RS06040 PF07690 Major Facilitator Superfamily KQ251_RS06045 PF12169 DNA polymerase III subunits gamma and tau domain III KQ251_RS06045 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding KQ251_RS06045 PF12170 DNA polymerase III tau subunit V interacting with alpha KQ251_RS06055 PF05506 Domain of unknown function (DUF756) KQ251_RS06055 PF04185 Phosphoesterase family KQ251_RS06060 PF03061 Thioesterase superfamily KQ251_RS06065 PF00465 Iron-containing alcohol dehydrogenase KQ251_RS06075 PF01451 Low molecular weight phosphotyrosine protein phosphatase KQ251_RS06080 PF01565 FAD binding domain KQ251_RS06080 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KQ251_RS06095 PF01645 Conserved region in glutamate synthase KQ251_RS06115 PF12832 MFS_1 like family KQ251_RS06125 PF02785 Biotin carboxylase C-terminal domain KQ251_RS06125 PF00289 Biotin carboxylase, N-terminal domain KQ251_RS06125 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KQ251_RS06130 PF00364 Biotin-requiring enzyme KQ251_RS06135 PF01220 Dehydroquinase class II KQ251_RS06140 PF11799 impB/mucB/samB family C-terminal domain KQ251_RS06140 PF13438 Domain of unknown function (DUF4113) KQ251_RS06140 PF00817 impB/mucB/samB family KQ251_RS06145 PF00005 ABC transporter KQ251_RS06150 PF00072 Response regulator receiver domain KQ251_RS06150 PF00486 Transcriptional regulatory protein, C terminal KQ251_RS06160 PF04324 BFD-like [2Fe-2S] binding domain KQ251_RS06160 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KQ251_RS06160 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KQ251_RS06160 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ251_RS06160 PF13806 Rieske-like [2Fe-2S] domain KQ251_RS06160 PF18267 Rubredoxin NAD+ reductase C-terminal domain KQ251_RS06165 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KQ251_RS06165 PF04324 BFD-like [2Fe-2S] binding domain KQ251_RS06165 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KQ251_RS06165 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ251_RS06165 PF18267 Rubredoxin NAD+ reductase C-terminal domain KQ251_RS06170 PF04324 BFD-like [2Fe-2S] binding domain KQ251_RS06170 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KQ251_RS06170 PF00384 Molybdopterin oxidoreductase KQ251_RS06170 PF01568 Molydopterin dinucleotide binding domain KQ251_RS06175 PF12804 MobA-like NTP transferase domain KQ251_RS06180 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KQ251_RS06180 PF00384 Molybdopterin oxidoreductase KQ251_RS06180 PF01568 Molydopterin dinucleotide binding domain KQ251_RS06185 PF06463 Molybdenum Cofactor Synthesis C KQ251_RS06185 PF04055 Radical SAM superfamily KQ251_RS06195 PF02391 MoaE protein KQ251_RS06200 PF00994 Probable molybdopterin binding domain KQ251_RS06200 PF01967 MoaC family KQ251_RS06205 PF00994 Probable molybdopterin binding domain KQ251_RS06205 PF03454 MoeA C-terminal region (domain IV) KQ251_RS06205 PF03453 MoeA N-terminal region (domain I and II) KQ251_RS06210 PF01638 HxlR-like helix-turn-helix KQ251_RS06215 PF00155 Aminotransferase class I and II KQ251_RS06215 PF00392 Bacterial regulatory proteins, gntR family KQ251_RS06220 PF00892 EamA-like transporter family KQ251_RS06240 PF02635 DsrE/DsrF-like family KQ251_RS06245 PF16363 GDP-mannose 4,6 dehydratase KQ251_RS06250 PF10415 Fumarase C C-terminus KQ251_RS06250 PF00206 Lyase KQ251_RS06270 PF01266 FAD dependent oxidoreductase KQ251_RS06280 PF02542 YgbB family KQ251_RS06290 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KQ251_RS06290 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KQ251_RS06295 PF00440 Bacterial regulatory proteins, tetR family KQ251_RS06300 PF00072 Response regulator receiver domain KQ251_RS06300 PF00158 Sigma-54 interaction domain KQ251_RS06300 PF02954 Bacterial regulatory protein, Fis family KQ251_RS06305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ251_RS06305 PF00512 His Kinase A (phospho-acceptor) domain KQ251_RS06305 PF00989 PAS fold KQ251_RS06310 PF04055 Radical SAM superfamily KQ251_RS06310 PF18693 TRAM domain KQ251_RS06310 PF00919 Uncharacterized protein family UPF0004 KQ251_RS06315 PF00696 Amino acid kinase family KQ251_RS06320 PF01765 Ribosome recycling factor KQ251_RS06325 PF01255 Putative undecaprenyl diphosphate synthase KQ251_RS06335 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KQ251_RS06335 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KQ251_RS06335 PF13288 DXP reductoisomerase C-terminal domain KQ251_RS06340 PF13180 PDZ domain KQ251_RS06340 PF17820 PDZ domain KQ251_RS06340 PF02163 Peptidase family M50 KQ251_RS06345 PF01103 Surface antigen KQ251_RS06345 PF07244 Surface antigen variable number repeat KQ251_RS06355 PF00132 Bacterial transferase hexapeptide (six repeats) KQ251_RS06355 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD KQ251_RS06360 PF07977 FabA-like domain KQ251_RS06365 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 KQ251_RS06365 PF00132 Bacterial transferase hexapeptide (six repeats) KQ251_RS06380 PF02631 RecX family KQ251_RS06385 PF00154 recA bacterial DNA recombination protein KQ251_RS06390 PF01479 S4 domain KQ251_RS06395 PF13419 Haloacid dehalogenase-like hydrolase KQ251_RS06420 PF01037 Lrp/AsnC ligand binding domain KQ251_RS06425 PF00266 Aminotransferase class-V KQ251_RS06430 PF00324 Amino acid permease KQ251_RS06445 PF05922 Peptidase inhibitor I9 KQ251_RS06445 PF00082 Subtilase family KQ251_RS06450 PF00916 Sulfate permease family KQ251_RS06450 PF01740 STAS domain KQ251_RS06465 PF03050 Transposase IS66 family KQ251_RS06465 PF13005 zinc-finger binding domain of transposase IS66 KQ251_RS06465 PF13007 Transposase C of IS166 homeodomain KQ251_RS06465 PF13817 IS66 C-terminal element KQ251_RS06470 PF02586 SOS response associated peptidase (SRAP) KQ251_RS06475 PF07995 Glucose / Sorbosone dehydrogenase KQ251_RS06485 PF03707 Bacterial signalling protein N terminal repeat KQ251_RS06485 PF00990 Diguanylate cyclase, GGDEF domain KQ251_RS06485 PF00563 EAL domain KQ251_RS06505 PF02378 Phosphotransferase system, EIIC KQ251_RS06505 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KQ251_RS06510 PF00294 pfkB family carbohydrate kinase KQ251_RS06515 PF05524 PEP-utilising enzyme, N-terminal KQ251_RS06515 PF00391 PEP-utilising enzyme, mobile domain KQ251_RS06515 PF02896 PEP-utilising enzyme, TIM barrel domain KQ251_RS06515 PF00381 PTS HPr component phosphorylation site KQ251_RS06515 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KQ251_RS06540 PF05525 Branched-chain amino acid transport protein KQ251_RS06545 PF00557 Metallopeptidase family M24 KQ251_RS06550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_RS06550 PF03466 LysR substrate binding domain KQ251_RS06560 PF00462 Glutaredoxin KQ251_RS06565 PF00202 Aminotransferase class-III KQ251_RS06570 PF00571 CBS domain KQ251_RS06570 PF00478 IMP dehydrogenase / GMP reductase domain KQ251_RS06595 PF02881 SRP54-type protein, helical bundle domain KQ251_RS06595 PF00448 SRP54-type protein, GTPase domain KQ251_RS06605 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) KQ251_RS06620 PF08173 Membrane bound YbgT-like protein KQ251_RS06625 PF02322 Cytochrome bd terminal oxidase subunit II KQ251_RS06630 PF01654 Cytochrome bd terminal oxidase subunit I KQ251_RS06640 PF00665 Integrase core domain KQ251_RS06640 PF13936 Helix-turn-helix domain KQ251_RS06645 PF01636 Phosphotransferase enzyme family KQ251_RS06650 PF00665 Integrase core domain KQ251_RS06650 PF13936 Helix-turn-helix domain KQ251_RS06655 PF00665 Integrase core domain KQ251_RS06655 PF13936 Helix-turn-helix domain KQ251_RS06665 PF07290 Protein of unknown function (DUF1449) KQ251_RS06675 PF00294 pfkB family carbohydrate kinase KQ251_RS06680 PF07715 TonB-dependent Receptor Plug Domain KQ251_RS06680 PF00593 TonB dependent receptor KQ251_RS06685 PF08367 Peptidase M16C associated KQ251_RS06685 PF00675 Insulinase (Peptidase family M16) KQ251_RS06685 PF05193 Peptidase M16 inactive domain KQ251_RS06690 PF02253 Phospholipase A1 KQ251_RS06695 PF02386 Cation transport protein KQ251_RS06700 PF02254 TrkA-N domain KQ251_RS06700 PF02080 TrkA-C domain KQ251_RS06705 PF00585 C-terminal regulatory domain of Threonine dehydratase KQ251_RS06705 PF00291 Pyridoxal-phosphate dependent enzyme KQ251_RS06710 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) KQ251_RS06725 PF01118 Semialdehyde dehydrogenase, NAD binding domain KQ251_RS06725 PF02774 Semialdehyde dehydrogenase, dimerisation domain KQ251_RS06735 PF02617 ATP-dependent Clp protease adaptor protein ClpS KQ251_RS06740 PF10431 C-terminal, D2-small domain, of ClpB protein KQ251_RS06740 PF02861 Clp amino terminal domain, pathogenicity island component KQ251_RS06740 PF17871 AAA lid domain KQ251_RS06740 PF07724 AAA domain (Cdc48 subfamily) KQ251_RS06740 PF00004 ATPase family associated with various cellular activities (AAA) KQ251_RS06745 PF02694 Uncharacterised BCR, YnfA/UPF0060 family KQ251_RS06750 PF00793 DAHP synthetase I family KQ251_RS06765 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ251_RS06765 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KQ251_RS06795 PF00117 Glutamine amidotransferase class-I KQ251_RS06795 PF06418 CTP synthase N-terminus KQ251_RS06800 PF00793 DAHP synthetase I family KQ251_RS06805 PF03952 Enolase, N-terminal domain KQ251_RS06805 PF00113 Enolase, C-terminal TIM barrel domain KQ251_RS06810 PF04239 Protein of unknown function (DUF421) KQ251_RS06815 PF04977 Septum formation initiator KQ251_RS06820 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KQ251_RS06825 PF01144 Coenzyme A transferase KQ251_RS06830 PF01144 Coenzyme A transferase KQ251_RS06835 PF00108 Thiolase, N-terminal domain KQ251_RS06835 PF02803 Thiolase, C-terminal domain KQ251_RS06840 PF10397 Adenylosuccinate lyase C-terminus KQ251_RS06840 PF00206 Lyase KQ251_RS06845 PF00561 alpha/beta hydrolase fold KQ251_RS06850 PF07690 Major Facilitator Superfamily KQ251_RS06855 PF02627 Carboxymuconolactone decarboxylase family KQ251_RS06860 PF00775 Dioxygenase KQ251_RS06860 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal KQ251_RS06865 PF00775 Dioxygenase KQ251_RS06870 PF01487 Type I 3-dehydroquinase KQ251_RS06875 PF05048 Periplasmic copper-binding protein (NosD) KQ251_RS06880 PF04966 Carbohydrate-selective porin, OprB family KQ251_RS06885 PF13360 PQQ-like domain KQ251_RS06885 PF01011 PQQ enzyme repeat KQ251_RS06895 PF04143 Sulphur transport KQ251_RS06905 PF00753 Metallo-beta-lactamase superfamily KQ251_RS06910 PF09339 IclR helix-turn-helix domain KQ251_RS06910 PF01614 Bacterial transcriptional regulator KQ251_RS06915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_RS06915 PF03466 LysR substrate binding domain KQ251_RS06920 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ251_RS06920 PF02770 Acyl-CoA dehydrogenase, middle domain KQ251_RS06920 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ251_RS06935 PF00106 short chain dehydrogenase KQ251_RS06945 PF07690 Major Facilitator Superfamily KQ251_RS06955 PF01425 Amidase KQ251_RS06960 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KQ251_RS06975 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KQ251_RS06975 PF00355 Rieske [2Fe-2S] domain KQ251_RS06990 PF00175 Oxidoreductase NAD-binding domain KQ251_RS06990 PF00111 2Fe-2S iron-sulfur cluster binding domain KQ251_RS06995 PF01613 Flavin reductase like domain KQ251_RS07000 PF02311 AraC-like ligand binding domain KQ251_RS07000 PF12833 Helix-turn-helix domain KQ251_RS07005 PF07833 Copper amine oxidase N-terminal domain KQ251_RS07005 PF01179 Copper amine oxidase, enzyme domain KQ251_RS07005 PF02728 Copper amine oxidase, N3 domain KQ251_RS07005 PF02727 Copper amine oxidase, N2 domain KQ251_RS07015 PF00171 Aldehyde dehydrogenase family KQ251_RS07020 PF01804 Penicillin amidase KQ251_RS07025 PF12146 Serine aminopeptidase, S33 KQ251_RS07030 PF00108 Thiolase, N-terminal domain KQ251_RS07030 PF02803 Thiolase, C-terminal domain KQ251_RS07035 PF01144 Coenzyme A transferase KQ251_RS07040 PF01144 Coenzyme A transferase KQ251_RS07045 PF04444 Catechol dioxygenase N terminus KQ251_RS07045 PF00775 Dioxygenase KQ251_RS07050 PF02426 Muconolactone delta-isomerase KQ251_RS07055 PF13378 Enolase C-terminal domain-like KQ251_RS07055 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KQ251_RS07060 PF03466 LysR substrate binding domain KQ251_RS07060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_RS07070 PF00392 Bacterial regulatory proteins, gntR family KQ251_RS07070 PF07729 FCD domain KQ251_RS07075 PF00920 Dehydratase family KQ251_RS07080 PF07690 Major Facilitator Superfamily KQ251_RS07090 PF00171 Aldehyde dehydrogenase family KQ251_RS07100 PF00561 alpha/beta hydrolase fold KQ251_RS07105 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KQ251_RS07105 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ251_RS07120 PF13411 MerR HTH family regulatory protein KQ251_RS07130 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ251_RS07140 PF12706 Beta-lactamase superfamily domain KQ251_RS07145 PF08359 YsiA-like protein, C-terminal region KQ251_RS07145 PF00440 Bacterial regulatory proteins, tetR family KQ251_RS07155 PF00857 Isochorismatase family KQ251_RS07160 PF03466 LysR substrate binding domain KQ251_RS07160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_RS07165 PF07995 Glucose / Sorbosone dehydrogenase KQ251_RS07170 PF02254 TrkA-N domain KQ251_RS07170 PF00999 Sodium/hydrogen exchanger family KQ251_RS07180 PF07687 Peptidase dimerisation domain KQ251_RS07180 PF01546 Peptidase family M20/M25/M40 KQ251_RS07215 PF13737 Transposase DDE domain KQ251_RS07230 PF07690 Major Facilitator Superfamily KQ251_RS07235 PF04909 Amidohydrolase KQ251_RS07250 PF08450 SMP-30/Gluconolactonase/LRE-like region KQ251_RS07260 PF03466 LysR substrate binding domain KQ251_RS07260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_RS07275 PF13533 Biotin-lipoyl like KQ251_RS07290 PF00171 Aldehyde dehydrogenase family KQ251_RS07295 PF00920 Dehydratase family KQ251_RS07305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_RS07305 PF03466 LysR substrate binding domain KQ251_RS07310 PF01370 NAD dependent epimerase/dehydratase family KQ251_RS07315 PF07690 Major Facilitator Superfamily KQ251_RS07320 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KQ251_RS07320 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KQ251_RS07325 PF12833 Helix-turn-helix domain KQ251_RS07325 PF06719 AraC-type transcriptional regulator N-terminus KQ251_RS07340 PF08240 Alcohol dehydrogenase GroES-like domain KQ251_RS07340 PF00107 Zinc-binding dehydrogenase KQ251_RS07350 PF01032 FecCD transport family KQ251_RS07355 PF00005 ABC transporter KQ251_RS07375 PF14572 Phosphoribosyl synthetase-associated domain KQ251_RS07375 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KQ251_RS07380 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KQ251_RS07410 PF00196 Bacterial regulatory proteins, luxR family KQ251_RS07415 PF01425 Amidase KQ251_RS07420 PF13533 Biotin-lipoyl like KQ251_RS07425 PF07690 Major Facilitator Superfamily KQ251_RS07450 PF01975 Survival protein SurE KQ251_RS07460 PF13291 ACT domain KQ251_RS07460 PF04607 Region found in RelA / SpoT proteins KQ251_RS07460 PF02824 TGS domain KQ251_RS07505 PF12146 Serine aminopeptidase, S33 KQ251_RS07510 PF02311 AraC-like ligand binding domain KQ251_RS07510 PF12833 Helix-turn-helix domain KQ251_RS07520 PF16527 Two-component sensor protein CpxA, periplasmic domain KQ251_RS07520 PF00672 HAMP domain KQ251_RS07520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ251_RS07520 PF00512 His Kinase A (phospho-acceptor) domain KQ251_RS07525 PF00486 Transcriptional regulatory protein, C terminal KQ251_RS07525 PF00072 Response regulator receiver domain KQ251_RS07530 PF00529 HlyD membrane-fusion protein of T1SS KQ251_RS07530 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KQ251_RS07535 PF00873 AcrB/AcrD/AcrF family KQ251_RS07540 PF00005 ABC transporter KQ251_RS07540 PF17755 UvrA DNA-binding domain KQ251_RS07540 PF17760 UvrA interaction domain KQ251_RS07545 PF00665 Integrase core domain KQ251_RS07545 PF13936 Helix-turn-helix domain KQ251_RS07550 PF16970 Type-1 fimbrial protein, A KQ251_RS07555 PF02753 Pili assembly chaperone PapD, C-terminal domain KQ251_RS07555 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain KQ251_RS07560 PF13954 PapC N-terminal domain KQ251_RS07560 PF00577 Outer membrane usher protein KQ251_RS07560 PF13953 PapC C-terminal domain KQ251_RS07565 PF00419 Fimbrial protein KQ251_RS07575 PF08240 Alcohol dehydrogenase GroES-like domain KQ251_RS07575 PF00107 Zinc-binding dehydrogenase KQ251_RS07585 PF00199 Catalase KQ251_RS07600 PF13091 PLD-like domain KQ251_RS07620 PF01244 Membrane dipeptidase (Peptidase family M19) KQ251_RS07625 PF13186 Iron-sulfur cluster-binding domain KQ251_RS07625 PF04055 Radical SAM superfamily KQ251_RS07630 PF05402 Coenzyme PQQ synthesis protein D (PqqD) KQ251_RS07635 PF03070 TENA/THI-4/PQQC family KQ251_RS07640 PF12706 Beta-lactamase superfamily domain KQ251_RS07645 PF08042 PqqA family KQ251_RS07650 PF02503 Polyphosphate kinase middle domain KQ251_RS07650 PF17941 Polyphosphate kinase C-terminal domain 1 KQ251_RS07650 PF13089 Polyphosphate kinase N-terminal domain KQ251_RS07650 PF13090 Polyphosphate kinase C-terminal domain 2 KQ251_RS07655 PF00149 Calcineurin-like phosphoesterase KQ251_RS07665 PF00857 Isochorismatase family KQ251_RS07665 PF00550 Phosphopantetheine attachment site KQ251_RS07670 PF00106 short chain dehydrogenase KQ251_RS07675 PF03459 TOBE domain KQ251_RS07675 PF00005 ABC transporter KQ251_RS07680 PF00528 Binding-protein-dependent transport system inner membrane component KQ251_RS07690 PF03459 TOBE domain KQ251_RS07690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_RS07695 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KQ251_RS07695 PF00355 Rieske [2Fe-2S] domain KQ251_RS07700 PF00866 Ring hydroxylating beta subunit KQ251_RS07705 PF00111 2Fe-2S iron-sulfur cluster binding domain KQ251_RS07705 PF00970 Oxidoreductase FAD-binding domain KQ251_RS07705 PF00175 Oxidoreductase NAD-binding domain KQ251_RS07710 PF14525 AraC-binding-like domain KQ251_RS07710 PF12833 Helix-turn-helix domain KQ251_RS07720 PF01613 Flavin reductase like domain KQ251_RS07735 PF01738 Dienelactone hydrolase family KQ251_RS07740 PF07690 Major Facilitator Superfamily KQ251_RS07745 PF12833 Helix-turn-helix domain KQ251_RS07745 PF06719 AraC-type transcriptional regulator N-terminus KQ251_RS07770 PF03466 LysR substrate binding domain KQ251_RS07770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_RS07775 PF01144 Coenzyme A transferase KQ251_RS07780 PF01144 Coenzyme A transferase KQ251_RS07790 PF02803 Thiolase, C-terminal domain KQ251_RS07790 PF00108 Thiolase, N-terminal domain KQ251_RS07795 PF03466 LysR substrate binding domain KQ251_RS07795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_RS07800 PF03466 LysR substrate binding domain KQ251_RS07800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_RS07815 PF10415 Fumarase C C-terminus KQ251_RS07815 PF00206 Lyase KQ251_RS07820 PF00593 TonB dependent receptor KQ251_RS07820 PF07715 TonB-dependent Receptor Plug Domain KQ251_RS07825 PF00083 Sugar (and other) transporter KQ251_RS07840 PF00005 ABC transporter KQ251_RS07845 PF00528 Binding-protein-dependent transport system inner membrane component KQ251_RS07850 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KQ251_RS07865 PF00392 Bacterial regulatory proteins, gntR family KQ251_RS07865 PF07702 UTRA domain KQ251_RS07875 PF02525 Flavodoxin-like fold KQ251_RS07880 PF01638 HxlR-like helix-turn-helix KQ251_RS07885 PF12833 Helix-turn-helix domain KQ251_RS07885 PF06445 GyrI-like small molecule binding domain KQ251_RS07900 PF01925 Sulfite exporter TauE/SafE KQ251_RS07915 PF00753 Metallo-beta-lactamase superfamily KQ251_RS07915 PF04273 Putative phosphatase (DUF442) KQ251_RS07920 PF00072 Response regulator receiver domain KQ251_RS07920 PF00158 Sigma-54 interaction domain KQ251_RS07920 PF02954 Bacterial regulatory protein, Fis family KQ251_RS07925 PF01062 Bestrophin, RFP-TM, chloride channel KQ251_RS07930 PF08240 Alcohol dehydrogenase GroES-like domain KQ251_RS07930 PF00107 Zinc-binding dehydrogenase KQ251_RS07935 PF00106 short chain dehydrogenase KQ251_RS07940 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ251_RS07940 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KQ251_RS07945 PF02817 e3 binding domain KQ251_RS07945 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KQ251_RS07945 PF00364 Biotin-requiring enzyme KQ251_RS07950 PF02780 Transketolase, C-terminal domain KQ251_RS07950 PF02779 Transketolase, pyrimidine binding domain KQ251_RS07955 PF00676 Dehydrogenase E1 component KQ251_RS07960 PF04055 Radical SAM superfamily KQ251_RS07975 PF00990 Diguanylate cyclase, GGDEF domain KQ251_RS07975 PF08448 PAS fold KQ251_RS07980 PF01264 Chorismate synthase KQ251_RS07985 PF05175 Methyltransferase small domain KQ251_RS07990 PF00291 Pyridoxal-phosphate dependent enzyme KQ251_RS08000 PF01434 Peptidase family M41 KQ251_RS08000 PF17862 AAA+ lid domain KQ251_RS08000 PF00004 ATPase family associated with various cellular activities (AAA) KQ251_RS08040 PF00570 HRDC domain KQ251_RS08040 PF01612 3'-5' exonuclease KQ251_RS08045 PF02132 RecR protein KQ251_RS08045 PF13662 Toprim domain KQ251_RS08050 PF02575 YbaB/EbfC DNA-binding family KQ251_RS08060 PF01053 Cys/Met metabolism PLP-dependent enzyme KQ251_RS08065 PF00561 alpha/beta hydrolase fold KQ251_RS08070 PF08241 Methyltransferase domain KQ251_RS08100 PF01230 HIT domain KQ251_RS08135 PF00005 ABC transporter KQ251_RS08150 PF02684 Lipid-A-disaccharide synthetase KQ251_RS08155 PF07715 TonB-dependent Receptor Plug Domain KQ251_RS08155 PF00593 TonB dependent receptor KQ251_RS08175 PF01925 Sulfite exporter TauE/SafE KQ251_RS08180 PF00793 DAHP synthetase I family KQ251_RS08185 PF02654 Cobalamin-5-phosphate synthase KQ251_RS08195 PF00300 Histidine phosphatase superfamily (branch 1) KQ251_RS08200 PF02277 Phosphoribosyltransferase KQ251_RS08205 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase KQ251_RS08215 PF13419 Haloacid dehalogenase-like hydrolase KQ251_RS08240 PF07715 TonB-dependent Receptor Plug Domain KQ251_RS08240 PF00593 TonB dependent receptor KQ251_RS08255 PF04183 IucA / IucC family KQ251_RS08255 PF06276 Ferric iron reductase FhuF-like transporter KQ251_RS08260 PF04183 IucA / IucC family KQ251_RS08260 PF06276 Ferric iron reductase FhuF-like transporter KQ251_RS08265 PF07690 Major Facilitator Superfamily KQ251_RS08270 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) KQ251_RS08275 PF06276 Ferric iron reductase FhuF-like transporter KQ251_RS08275 PF04183 IucA / IucC family KQ251_RS08280 PF04073 Aminoacyl-tRNA editing domain KQ251_RS08290 PF03109 ABC1 family KQ251_RS08295 PF02770 Acyl-CoA dehydrogenase, middle domain KQ251_RS08295 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ251_RS08295 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ251_RS08300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ251_RS08300 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ251_RS08300 PF02770 Acyl-CoA dehydrogenase, middle domain KQ251_RS08305 PF00487 Fatty acid desaturase KQ251_RS08310 PF12852 Cupin KQ251_RS08310 PF12833 Helix-turn-helix domain KQ251_RS08315 PF09312 SurA N-terminal domain KQ251_RS08315 PF00639 PPIC-type PPIASE domain KQ251_RS08320 PF00216 Bacterial DNA-binding protein KQ251_RS08335 PF02082 Transcriptional regulator KQ251_RS08340 PF00266 Aminotransferase class-V KQ251_RS08345 PF01592 NifU-like N terminal domain KQ251_RS08350 PF01521 Iron-sulphur cluster biosynthesis KQ251_RS08355 PF00226 DnaJ domain KQ251_RS08355 PF07743 HSCB C-terminal oligomerisation domain KQ251_RS08360 PF00012 Hsp70 protein KQ251_RS08365 PF00111 2Fe-2S iron-sulfur cluster binding domain KQ251_RS08370 PF00211 Adenylate and Guanylate cyclase catalytic domain KQ251_RS08380 PF03461 TRCF domain KQ251_RS08380 PF17757 UvrB interaction domain KQ251_RS08380 PF02559 CarD-like/TRCF domain KQ251_RS08380 PF00271 Helicase conserved C-terminal domain KQ251_RS08380 PF00270 DEAD/DEAH box helicase KQ251_RS08400 PF03737 Aldolase/RraA KQ251_RS08405 PF13460 NAD(P)H-binding KQ251_RS08410 PF01649 Ribosomal protein S20 KQ251_RS08420 PF00459 Inositol monophosphatase family KQ251_RS08435 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KQ251_RS08435 PF00005 ABC transporter KQ251_RS08440 PF00528 Binding-protein-dependent transport system inner membrane component KQ251_RS08445 PF00528 Binding-protein-dependent transport system inner membrane component KQ251_RS08450 PF01432 Peptidase family M3 KQ251_RS08470 PF00593 TonB dependent receptor KQ251_RS08470 PF07715 TonB-dependent Receptor Plug Domain KQ251_RS08480 PF01618 MotA/TolQ/ExbB proton channel family KQ251_RS08485 PF02472 Biopolymer transport protein ExbD/TolR KQ251_RS08490 PF02472 Biopolymer transport protein ExbD/TolR KQ251_RS08500 PF01274 Malate synthase KQ251_RS08505 PF03969 AFG1-like ATPase KQ251_RS08515 PF00743 Flavin-binding monooxygenase-like KQ251_RS08525 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KQ251_RS08535 PF00216 Bacterial DNA-binding protein KQ251_RS08540 PF00575 S1 RNA binding domain KQ251_RS08545 PF02224 Cytidylate kinase KQ251_RS08555 PF14437 MafB19-like deaminase KQ251_RS08565 PF03167 Uracil DNA glycosylase superfamily KQ251_RS08575 PF03934 Type II secretion system (T2SS), protein K KQ251_RS08580 PF07963 Prokaryotic N-terminal methylation motif KQ251_RS08580 PF11612 Type II secretion system (T2SS), protein J KQ251_RS08585 PF02501 Type II secretion system (T2SS), protein I KQ251_RS08585 PF07963 Prokaryotic N-terminal methylation motif KQ251_RS08600 PF01026 TatD related DNase KQ251_RS08610 PF09115 DNA polymerase III, delta subunit, C terminal KQ251_RS08615 PF02348 Cytidylyltransferase KQ251_RS08620 PF02606 Tetraacyldisaccharide-1-P 4'-kinase KQ251_RS08625 PF00005 ABC transporter KQ251_RS08625 PF00664 ABC transporter transmembrane region KQ251_RS08635 PF01618 MotA/TolQ/ExbB proton channel family KQ251_RS08640 PF02195 ParB-like nuclease domain KQ251_RS08640 PF17762 HTH domain found in ParB protein KQ251_RS08645 PF13614 AAA domain KQ251_RS08650 PF02527 rRNA small subunit methyltransferase G KQ251_RS08655 PF00483 Nucleotidyl transferase KQ251_RS08660 PF01636 Phosphotransferase enzyme family KQ251_RS08665 PF03968 OstA-like protein KQ251_RS08665 PF04453 LPS transport system D KQ251_RS08670 PF09312 SurA N-terminal domain KQ251_RS08670 PF00639 PPIC-type PPIASE domain KQ251_RS08675 PF01116 Fructose-bisphosphate aldolase class-II KQ251_RS08685 PF00162 Phosphoglycerate kinase KQ251_RS08695 PF02545 Maf-like protein KQ251_RS08700 PF08007 Cupin superfamily protein KQ251_RS08715 PF00375 Sodium:dicarboxylate symporter family KQ251_RS08720 PF06912 Protein of unknown function (DUF1275) KQ251_RS08725 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) KQ251_RS08730 PF00664 ABC transporter transmembrane region KQ251_RS08730 PF00005 ABC transporter KQ251_RS08740 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term KQ251_RS08740 PF12833 Helix-turn-helix domain KQ251_RS08745 PF01597 Glycine cleavage H-protein KQ251_RS08750 PF02146 Sir2 family KQ251_RS08755 PF00474 Sodium:solute symporter family KQ251_RS08760 PF01037 Lrp/AsnC ligand binding domain KQ251_RS08765 PF01619 Proline dehydrogenase KQ251_RS08765 PF18327 Proline utilization A proline dehydrogenase N-terminal domain KQ251_RS08765 PF00171 Aldehyde dehydrogenase family KQ251_RS08765 PF14850 DNA-binding domain of Proline dehydrogenase KQ251_RS08770 PF04229 GrpB protein KQ251_RS08775 PF05958 tRNA (Uracil-5-)-methyltransferase KQ251_RS08785 PF09992 Phosphodiester glycosidase KQ251_RS08795 PF04264 YceI-like domain KQ251_RS08805 PF02780 Transketolase, C-terminal domain KQ251_RS08805 PF00456 Transketolase, thiamine diphosphate binding domain KQ251_RS08805 PF02779 Transketolase, pyrimidine binding domain KQ251_RS08810 PF02773 S-adenosylmethionine synthetase, C-terminal domain KQ251_RS08810 PF02772 S-adenosylmethionine synthetase, central domain KQ251_RS08810 PF00438 S-adenosylmethionine synthetase, N-terminal domain KQ251_RS08830 PF00905 Penicillin binding protein transpeptidase domain KQ251_RS08845 PF02075 Crossover junction endodeoxyribonuclease RuvC KQ251_RS08850 PF03853 YjeF-related protein N-terminus KQ251_RS08850 PF01256 Carbohydrate kinase KQ251_RS08855 PF08331 Domain of unknown function (DUF1730) KQ251_RS08860 PF06968 Biotin and Thiamin Synthesis associated domain KQ251_RS08860 PF04055 Radical SAM superfamily KQ251_RS08875 PF16970 Type-1 fimbrial protein, A KQ251_RS08880 PF02753 Pili assembly chaperone PapD, C-terminal domain KQ251_RS08880 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain KQ251_RS08885 PF00577 Outer membrane usher protein KQ251_RS08885 PF13954 PapC N-terminal domain KQ251_RS08885 PF13953 PapC C-terminal domain KQ251_RS08905 PF00892 EamA-like transporter family KQ251_RS08915 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin KQ251_RS08925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_RS08925 PF03466 LysR substrate binding domain KQ251_RS08945 PF00440 Bacterial regulatory proteins, tetR family KQ251_RS08955 PF01709 Transcriptional regulator KQ251_RS08960 PF01037 Lrp/AsnC ligand binding domain KQ251_RS08970 PF00005 ABC transporter KQ251_RS08975 PF00528 Binding-protein-dependent transport system inner membrane component KQ251_RS08980 PF00528 Binding-protein-dependent transport system inner membrane component KQ251_RS08995 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KQ251_RS08995 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ251_RS09005 PF00296 Luciferase-like monooxygenase KQ251_RS09010 PF03180 NLPA lipoprotein KQ251_RS09015 PF03180 NLPA lipoprotein KQ251_RS09020 PF00005 ABC transporter KQ251_RS09020 PF09383 NIL domain KQ251_RS09025 PF00528 Binding-protein-dependent transport system inner membrane component KQ251_RS09030 PF06071 Protein of unknown function (DUF933) KQ251_RS09030 PF01926 50S ribosome-binding GTPase KQ251_RS09055 PF03591 AzlC protein KQ251_RS09060 PF05437 Branched-chain amino acid transport protein (AzlD) KQ251_RS09070 PF02222 ATP-grasp domain KQ251_RS09075 PF08335 GlnD PII-uridylyltransferase KQ251_RS09075 PF01966 HD domain KQ251_RS09075 PF01909 Nucleotidyltransferase domain KQ251_RS09080 PF00155 Aminotransferase class I and II KQ251_RS09090 PF12852 Cupin KQ251_RS09090 PF12833 Helix-turn-helix domain KQ251_RS09095 PF00255 Glutathione peroxidase KQ251_RS09100 PF01641 SelR domain KQ251_RS09105 PF00155 Aminotransferase class I and II KQ251_RS09110 PF00375 Sodium:dicarboxylate symporter family KQ251_RS09115 PF13936 Helix-turn-helix domain KQ251_RS09115 PF00665 Integrase core domain KQ251_RS09120 PF17763 Glutaminase/Asparaginase C-terminal domain KQ251_RS09120 PF00710 Asparaginase, N-terminal KQ251_RS09125 PF07733 Bacterial DNA polymerase III alpha NTPase domain KQ251_RS09125 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KQ251_RS09125 PF14579 Helix-hairpin-helix motif KQ251_RS09125 PF02811 PHP domain KQ251_RS09125 PF01336 OB-fold nucleic acid binding domain KQ251_RS09130 PF00588 SpoU rRNA Methylase family KQ251_RS09135 PF00132 Bacterial transferase hexapeptide (six repeats) KQ251_RS09150 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ251_RS09150 PF13192 Thioredoxin domain KQ251_RS09165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_RS09165 PF03466 LysR substrate binding domain KQ251_RS09170 PF01758 Sodium Bile acid symporter family KQ251_RS09175 PF01022 Bacterial regulatory protein, arsR family KQ251_RS09180 PF03960 ArsC family KQ251_RS09190 PF01979 Amidohydrolase family KQ251_RS09190 PF13382 Adenine deaminase C-terminal domain KQ251_RS09200 PF03466 LysR substrate binding domain KQ251_RS09200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_RS09210 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin KQ251_RS09215 PF01177 Asp/Glu/Hydantoin racemase KQ251_RS09220 PF02668 Taurine catabolism dioxygenase TauD, TfdA family KQ251_RS09225 PF00528 Binding-protein-dependent transport system inner membrane component KQ251_RS09230 PF00005 ABC transporter KQ251_RS09235 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KQ251_RS09245 PF00083 Sugar (and other) transporter KQ251_RS09250 PF00296 Luciferase-like monooxygenase KQ251_RS09265 PF01654 Cytochrome bd terminal oxidase subunit I KQ251_RS09270 PF02322 Cytochrome bd terminal oxidase subunit II KQ251_RS09280 PF00155 Aminotransferase class I and II KQ251_RS09280 PF00392 Bacterial regulatory proteins, gntR family KQ251_RS09285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_RS09285 PF03466 LysR substrate binding domain KQ251_RS09300 PF00698 Acyl transferase domain KQ251_RS09305 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG KQ251_RS09315 PF01039 Carboxyl transferase domain KQ251_RS09320 PF06857 Malonate decarboxylase delta subunit (MdcD) KQ251_RS09325 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase KQ251_RS09330 PF16957 Malonate decarboxylase, alpha subunit, transporter KQ251_RS09335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_RS09335 PF03466 LysR substrate binding domain KQ251_RS09345 PF07690 Major Facilitator Superfamily KQ251_RS09360 PF00155 Aminotransferase class I and II KQ251_RS09360 PF00392 Bacterial regulatory proteins, gntR family KQ251_RS09365 PF04172 LrgB-like family KQ251_RS09370 PF03788 LrgA family KQ251_RS09375 PF03466 LysR substrate binding domain KQ251_RS09375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_RS09380 PF02798 Glutathione S-transferase, N-terminal domain KQ251_RS09380 PF14834 Glutathione S-transferase, C-terminal domain KQ251_RS09385 PF02798 Glutathione S-transferase, N-terminal domain KQ251_RS09390 PF03466 LysR substrate binding domain KQ251_RS09390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_RS09400 PF00581 Rhodanese-like domain KQ251_RS09405 PF00132 Bacterial transferase hexapeptide (six repeats) KQ251_RS09415 PF00266 Aminotransferase class-V KQ251_RS09425 PF01810 LysE type translocator KQ251_RS09430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_RS09430 PF03466 LysR substrate binding domain KQ251_RS09440 PF00497 Bacterial extracellular solute-binding proteins, family 3 KQ251_RS09445 PF00497 Bacterial extracellular solute-binding proteins, family 3 KQ251_RS09450 PF00005 ABC transporter KQ251_RS09455 PF00528 Binding-protein-dependent transport system inner membrane component KQ251_RS09460 PF00528 Binding-protein-dependent transport system inner membrane component KQ251_RS09475 PF00072 Response regulator receiver domain KQ251_RS09480 PF00072 Response regulator receiver domain KQ251_RS09480 PF09308 LuxQ, periplasmic KQ251_RS09480 PF00512 His Kinase A (phospho-acceptor) domain KQ251_RS09480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ251_RS09490 PF13404 AsnC-type helix-turn-helix domain KQ251_RS09490 PF01037 Lrp/AsnC ligand binding domain KQ251_RS09500 PF00717 Peptidase S24-like KQ251_RS09525 PF06628 Catalase-related immune-responsive KQ251_RS09525 PF18011 C-terminal domain found in long catalases KQ251_RS09525 PF00199 Catalase KQ251_RS09535 PF02464 Competence-damaged protein KQ251_RS09535 PF00994 Probable molybdopterin binding domain KQ251_RS09535 PF18146 Damage-inducible protein CinA KH domain KQ251_RS09570 PF03466 LysR substrate binding domain KQ251_RS09570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_RS09590 PF00501 AMP-binding enzyme KQ251_RS09590 PF13193 AMP-binding enzyme C-terminal domain KQ251_RS09595 PF00440 Bacterial regulatory proteins, tetR family KQ251_RS09600 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ251_RS09600 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ251_RS09600 PF02770 Acyl-CoA dehydrogenase, middle domain KQ251_RS09605 PF01039 Carboxyl transferase domain KQ251_RS09610 PF00378 Enoyl-CoA hydratase/isomerase KQ251_RS09615 PF02785 Biotin carboxylase C-terminal domain KQ251_RS09615 PF00289 Biotin carboxylase, N-terminal domain KQ251_RS09615 PF00364 Biotin-requiring enzyme KQ251_RS09615 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KQ251_RS09615 PF18140 Propionyl-coenzyme A carboxylase BT domain KQ251_RS09620 PF00682 HMGL-like KQ251_RS09625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_RS09625 PF03466 LysR substrate binding domain KQ251_RS09640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ251_RS09640 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ251_RS09640 PF12806 Acetyl-CoA dehydrogenase C-terminal like KQ251_RS09640 PF02770 Acyl-CoA dehydrogenase, middle domain KQ251_RS09650 PF07690 Major Facilitator Superfamily KQ251_RS09660 PF01144 Coenzyme A transferase KQ251_RS09665 PF01144 Coenzyme A transferase KQ251_RS09670 PF07690 Major Facilitator Superfamily KQ251_RS09675 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ251_RS09675 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ251_RS09675 PF02770 Acyl-CoA dehydrogenase, middle domain KQ251_RS09680 PF00378 Enoyl-CoA hydratase/isomerase KQ251_RS09690 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KQ251_RS09690 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KQ251_RS09690 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain KQ251_RS09695 PF02803 Thiolase, C-terminal domain KQ251_RS09695 PF00108 Thiolase, N-terminal domain KQ251_RS09700 PF09339 IclR helix-turn-helix domain KQ251_RS09710 PF01810 LysE type translocator KQ251_RS09715 PF02543 Carbamoyltransferase N-terminus KQ251_RS09715 PF16861 Carbamoyltransferase C-terminus KQ251_RS09725 PF03060 Nitronate monooxygenase KQ251_RS09730 PF00378 Enoyl-CoA hydratase/isomerase KQ251_RS09735 PF09339 IclR helix-turn-helix domain KQ251_RS09740 PF02515 CoA-transferase family III KQ251_RS09745 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ251_RS09745 PF02770 Acyl-CoA dehydrogenase, middle domain KQ251_RS09745 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ251_RS09750 PF07690 Major Facilitator Superfamily KQ251_RS09755 PF13419 Haloacid dehalogenase-like hydrolase KQ251_RS09760 PF00266 Aminotransferase class-V KQ251_RS09765 PF01266 FAD dependent oxidoreductase KQ251_RS09770 PF00528 Binding-protein-dependent transport system inner membrane component KQ251_RS09775 PF08402 TOBE domain KQ251_RS09775 PF00005 ABC transporter KQ251_RS09785 PF07702 UTRA domain KQ251_RS09785 PF00392 Bacterial regulatory proteins, gntR family KQ251_RS09790 PF01494 FAD binding domain KQ251_RS09795 PF09339 IclR helix-turn-helix domain KQ251_RS09795 PF01614 Bacterial transcriptional regulator KQ251_RS09800 PF02525 Flavodoxin-like fold KQ251_RS09805 PF03466 LysR substrate binding domain KQ251_RS09805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_RS09810 PF02627 Carboxymuconolactone decarboxylase family KQ251_RS09815 PF00171 Aldehyde dehydrogenase family KQ251_RS09825 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin KQ251_RS09835 PF00171 Aldehyde dehydrogenase family KQ251_RS09840 PF00296 Luciferase-like monooxygenase KQ251_RS09845 PF01613 Flavin reductase like domain KQ251_RS09850 PF12697 Alpha/beta hydrolase family KQ251_RS09870 PF01292 Prokaryotic cytochrome b561 KQ251_RS09875 PF00199 Catalase KQ251_RS09910 PF00300 Histidine phosphatase superfamily (branch 1) KQ251_RS09920 PF03061 Thioesterase superfamily KQ251_RS09925 PF00132 Bacterial transferase hexapeptide (six repeats) KQ251_RS09930 PF07848 PaaX-like protein KQ251_RS09930 PF08223 PaaX-like protein C-terminal domain KQ251_RS09935 PF14535 AMP-binding enzyme C-terminal domain KQ251_RS09935 PF00501 AMP-binding enzyme KQ251_RS09940 PF02803 Thiolase, C-terminal domain KQ251_RS09940 PF00108 Thiolase, N-terminal domain KQ251_RS09945 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KQ251_RS09945 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain KQ251_RS09945 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KQ251_RS09950 PF00378 Enoyl-CoA hydratase/isomerase KQ251_RS09955 PF00378 Enoyl-CoA hydratase/isomerase KQ251_RS09960 PF00111 2Fe-2S iron-sulfur cluster binding domain KQ251_RS09960 PF00970 Oxidoreductase FAD-binding domain KQ251_RS09960 PF00175 Oxidoreductase NAD-binding domain KQ251_RS09965 PF01883 Iron-sulfur cluster assembly protein KQ251_RS09970 PF05138 Phenylacetic acid catabolic protein KQ251_RS09975 PF06243 Phenylacetic acid degradation B KQ251_RS09980 PF05138 Phenylacetic acid catabolic protein KQ251_RS09985 PF00171 Aldehyde dehydrogenase family KQ251_RS09985 PF01575 MaoC like domain KQ251_RS09990 PF03313 Serine dehydratase alpha chain KQ251_RS09990 PF03315 Serine dehydratase beta chain KQ251_RS09995 PF13520 Amino acid permease KQ251_RS10000 PF00171 Aldehyde dehydrogenase family KQ251_RS10005 PF00083 Sugar (and other) transporter KQ251_RS10015 PF04324 BFD-like [2Fe-2S] binding domain KQ251_RS10015 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ251_RS10025 PF01266 FAD dependent oxidoreductase KQ251_RS10030 PF05544 Proline racemase KQ251_RS10035 PF00392 Bacterial regulatory proteins, gntR family KQ251_RS10045 PF00701 Dihydrodipicolinate synthetase family KQ251_RS10055 PF09278 MerR, DNA binding KQ251_RS10055 PF00376 MerR family regulatory protein KQ251_RS10065 PF02677 Epoxyqueuosine reductase QueH KQ251_RS10080 PF07690 Major Facilitator Superfamily KQ251_RS10085 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KQ251_RS10095 PF03466 LysR substrate binding domain KQ251_RS10095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_RS10115 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE KQ251_RS10120 PF06812 ImpA, N-terminal, type VI secretion system KQ251_RS10125 PF00004 ATPase family associated with various cellular activities (AAA) KQ251_RS10125 PF10431 C-terminal, D2-small domain, of ClpB protein KQ251_RS10125 PF07724 AAA domain (Cdc48 subfamily) KQ251_RS10125 PF17871 AAA lid domain KQ251_RS10140 PF00691 OmpA family KQ251_RS10140 PF01389 OmpA-like transmembrane domain KQ251_RS10150 PF13936 Helix-turn-helix domain KQ251_RS10150 PF00665 Integrase core domain KQ251_RS10175 PF05947 Type VI secretion system, TssF KQ251_RS10190 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath KQ251_RS10215 PF00005 ABC transporter KQ251_RS10220 PF00497 Bacterial extracellular solute-binding proteins, family 3 KQ251_RS10225 PF01425 Amidase KQ251_RS10230 PF08753 NikR C terminal nickel binding domain KQ251_RS10230 PF01402 Ribbon-helix-helix protein, copG family KQ251_RS10245 PF01638 HxlR-like helix-turn-helix KQ251_RS10250 PF02525 Flavodoxin-like fold KQ251_RS10255 PF00289 Biotin carboxylase, N-terminal domain KQ251_RS10255 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KQ251_RS10255 PF02785 Biotin carboxylase C-terminal domain KQ251_RS10270 PF13823 Alcohol dehydrogenase GroES-associated KQ251_RS10270 PF08240 Alcohol dehydrogenase GroES-like domain KQ251_RS10270 PF00107 Zinc-binding dehydrogenase KQ251_RS10280 PF00440 Bacterial regulatory proteins, tetR family KQ251_RS10290 PF00654 Voltage gated chloride channel KQ251_RS10295 PF02785 Biotin carboxylase C-terminal domain KQ251_RS10295 PF00289 Biotin carboxylase, N-terminal domain KQ251_RS10295 PF00364 Biotin-requiring enzyme KQ251_RS10295 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KQ251_RS10305 PF07286 Protein of unknown function (DUF1445) KQ251_RS10310 PF03746 LamB/YcsF family KQ251_RS10315 PF01566 Natural resistance-associated macrophage protein KQ251_RS10320 PF03466 LysR substrate binding domain KQ251_RS10320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_RS10355 PF13936 Helix-turn-helix domain KQ251_RS10355 PF00665 Integrase core domain KQ251_RS10365 PF05593 RHS Repeat KQ251_RS10365 PF03527 RHS protein KQ251_RS10370 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) KQ251_RS10370 PF04717 Type VI secretion system, phage-baseplate injector KQ251_RS10370 PF13296 Putative type VI secretion system Rhs element Vgr KQ251_RS10395 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KQ251_RS10395 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KQ251_RS10425 PF00665 Integrase core domain KQ251_RS10425 PF13936 Helix-turn-helix domain KQ251_RS10445 PF03279 Bacterial lipid A biosynthesis acyltransferase KQ251_RS10450 PF00563 EAL domain KQ251_RS10450 PF00990 Diguanylate cyclase, GGDEF domain KQ251_RS10450 PF03707 Bacterial signalling protein N terminal repeat KQ251_RS10455 PF00892 EamA-like transporter family KQ251_RS10460 PF01037 Lrp/AsnC ligand binding domain KQ251_RS10465 PF00488 MutS domain V KQ251_RS10465 PF01624 MutS domain I KQ251_RS10465 PF05190 MutS family domain IV KQ251_RS10465 PF05192 MutS domain III KQ251_RS10465 PF05188 MutS domain II KQ251_RS10475 PF00037 4Fe-4S binding domain KQ251_RS10475 PF11953 Domain of unknown function (DUF3470) KQ251_RS10485 PF01596 O-methyltransferase KQ251_RS10495 PF00132 Bacterial transferase hexapeptide (six repeats) KQ251_RS10500 PF01205 Uncharacterized protein family UPF0029 KQ251_RS10510 PF00664 ABC transporter transmembrane region KQ251_RS10510 PF00005 ABC transporter KQ251_RS10510 PF03412 Peptidase C39 family KQ251_RS10515 PF02321 Outer membrane efflux protein KQ251_RS10520 PF12399 Branched-chain amino acid ATP-binding cassette transporter KQ251_RS10520 PF00005 ABC transporter KQ251_RS10525 PF03968 OstA-like protein KQ251_RS10540 PF00571 CBS domain KQ251_RS10540 PF01380 SIS domain KQ251_RS10545 PF09190 DALR domain KQ251_RS10545 PF01406 tRNA synthetases class I (C) catalytic domain KQ251_RS10600 PF01638 HxlR-like helix-turn-helix KQ251_RS10605 PF07690 Major Facilitator Superfamily KQ251_RS10630 PF14748 Pyrroline-5-carboxylate reductase dimerisation KQ251_RS10630 PF03807 NADP oxidoreductase coenzyme F420-dependent KQ251_RS10640 PF00313 'Cold-shock' DNA-binding domain KQ251_RS10645 PF01810 LysE type translocator KQ251_RS10675 PF02601 Exonuclease VII, large subunit KQ251_RS10675 PF13742 OB-fold nucleic acid binding domain KQ251_RS10710 PF09278 MerR, DNA binding KQ251_RS10710 PF00376 MerR family regulatory protein KQ251_RS10715 PF00403 Heavy-metal-associated domain KQ251_RS10720 PF00403 Heavy-metal-associated domain KQ251_RS10725 PF03466 LysR substrate binding domain KQ251_RS10725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_RS10730 PF00848 Ring hydroxylating alpha subunit (catalytic domain) KQ251_RS10730 PF00355 Rieske [2Fe-2S] domain KQ251_RS10735 PF00866 Ring hydroxylating beta subunit KQ251_RS10740 PF00111 2Fe-2S iron-sulfur cluster binding domain KQ251_RS10740 PF00175 Oxidoreductase NAD-binding domain KQ251_RS10740 PF00970 Oxidoreductase FAD-binding domain KQ251_RS10745 PF00106 short chain dehydrogenase KQ251_RS10750 PF03594 Benzoate membrane transport protein KQ251_RS10755 PF07690 Major Facilitator Superfamily KQ251_RS10765 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KQ251_RS10765 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KQ251_RS10770 PF00271 Helicase conserved C-terminal domain KQ251_RS10770 PF00270 DEAD/DEAH box helicase KQ251_RS10770 PF11898 Domain of unknown function (DUF3418) KQ251_RS10770 PF04408 Helicase associated domain (HA2) KQ251_RS10770 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold KQ251_RS10775 PF10417 C-terminal domain of 1-Cys peroxiredoxin KQ251_RS10775 PF00578 AhpC/TSA family KQ251_RS10795 PF13192 Thioredoxin domain KQ251_RS10795 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ251_RS10805 PF00043 Glutathione S-transferase, C-terminal domain KQ251_RS10805 PF02798 Glutathione S-transferase, N-terminal domain KQ251_RS10815 PF02390 Putative methyltransferase KQ251_RS10820 PF13417 Glutathione S-transferase, N-terminal domain KQ251_RS10820 PF00043 Glutathione S-transferase, C-terminal domain KQ251_RS10830 PF00691 OmpA family KQ251_RS10830 PF13488 Glycine zipper KQ251_RS10835 PF01979 Amidohydrolase family KQ251_RS10840 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KQ251_RS10840 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KQ251_RS10850 PF02926 THUMP domain KQ251_RS10850 PF10672 S-adenosylmethionine-dependent methyltransferase KQ251_RS10850 PF01170 Putative RNA methylase family UPF0020 KQ251_RS10865 PF00004 ATPase family associated with various cellular activities (AAA) KQ251_RS10865 PF07724 AAA domain (Cdc48 subfamily) KQ251_RS10865 PF17871 AAA lid domain KQ251_RS10865 PF02861 Clp amino terminal domain, pathogenicity island component KQ251_RS10865 PF10431 C-terminal, D2-small domain, of ClpB protein KQ251_RS10880 PF02566 OsmC-like protein KQ251_RS10890 PF00027 Cyclic nucleotide-binding domain KQ251_RS10890 PF13545 Crp-like helix-turn-helix domain KQ251_RS10895 PF00248 Aldo/keto reductase family KQ251_RS10910 PF00709 Adenylosuccinate synthetase KQ251_RS10915 PF13393 Histidyl-tRNA synthetase KQ251_RS10925 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KQ251_RS10925 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KQ251_RS10930 PF02272 DHHA1 domain KQ251_RS10930 PF01411 tRNA synthetases class II (A) KQ251_RS10930 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KQ251_RS10935 PF00696 Amino acid kinase family KQ251_RS10935 PF13840 ACT domain KQ251_RS10935 PF01842 ACT domain KQ251_RS10940 PF02599 Global regulator protein family KQ251_RS10945 PF01351 Ribonuclease HII KQ251_RS10955 PF01292 Prokaryotic cytochrome b561 KQ251_RS10960 PF00962 Adenosine/AMP deaminase KQ251_RS10965 PF00860 Permease family KQ251_RS10975 PF00743 Flavin-binding monooxygenase-like KQ251_RS10980 PF00106 short chain dehydrogenase KQ251_RS10990 PF17954 Quercetinase C-terminal cupin domain KQ251_RS10990 PF02678 Pirin KQ251_RS10995 PF17932 Tetracyclin repressor-like, C-terminal domain KQ251_RS10995 PF00440 Bacterial regulatory proteins, tetR family KQ251_RS11005 PF00106 short chain dehydrogenase KQ251_RS11010 PF00743 Flavin-binding monooxygenase-like KQ251_RS11015 PF04072 Leucine carboxyl methyltransferase KQ251_RS11020 PF12833 Helix-turn-helix domain KQ251_RS11025 PF00743 Flavin-binding monooxygenase-like KQ251_RS11035 PF07859 alpha/beta hydrolase fold KQ251_RS11040 PF05199 GMC oxidoreductase KQ251_RS11045 PF03573 outer membrane porin, OprD family KQ251_RS11050 PF07690 Major Facilitator Superfamily KQ251_RS11055 PF00355 Rieske [2Fe-2S] domain KQ251_RS11060 PF00111 2Fe-2S iron-sulfur cluster binding domain KQ251_RS11060 PF00175 Oxidoreductase NAD-binding domain KQ251_RS11075 PF07690 Major Facilitator Superfamily KQ251_RS11080 PF00378 Enoyl-CoA hydratase/isomerase KQ251_RS11085 PF00171 Aldehyde dehydrogenase family KQ251_RS11095 PF02770 Acyl-CoA dehydrogenase, middle domain KQ251_RS11095 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ251_RS11095 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ251_RS11100 PF03573 outer membrane porin, OprD family KQ251_RS11115 PF07519 Tannase and feruloyl esterase KQ251_RS11120 PF00392 Bacterial regulatory proteins, gntR family KQ251_RS11120 PF07729 FCD domain KQ251_RS11125 PF00171 Aldehyde dehydrogenase family KQ251_RS11130 PF00701 Dihydrodipicolinate synthetase family KQ251_RS11135 PF13378 Enolase C-terminal domain-like KQ251_RS11140 PF07690 Major Facilitator Superfamily KQ251_RS11145 PF08666 SAF domain KQ251_RS11145 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus KQ251_RS11150 PF00892 EamA-like transporter family KQ251_RS11160 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term KQ251_RS11160 PF12833 Helix-turn-helix domain KQ251_RS11165 PF00171 Aldehyde dehydrogenase family KQ251_RS11170 PF00324 Amino acid permease KQ251_RS11175 PF04958 Arginine N-succinyltransferase beta subunit KQ251_RS11180 PF00202 Aminotransferase class-III KQ251_RS11190 PF00171 Aldehyde dehydrogenase family KQ251_RS11200 PF07729 FCD domain KQ251_RS11200 PF00392 Bacterial regulatory proteins, gntR family KQ251_RS11210 PF00324 Amino acid permease KQ251_RS11215 PF01266 FAD dependent oxidoreductase KQ251_RS11220 PF00324 Amino acid permease KQ251_RS11230 PF05643 Putative bacterial lipoprotein (DUF799) KQ251_RS11240 PF03783 Curli production assembly/transport component CsgG KQ251_RS11295 PF03527 RHS protein KQ251_RS11295 PF05593 RHS Repeat KQ251_RS11300 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) KQ251_RS11300 PF04717 Type VI secretion system, phage-baseplate injector KQ251_RS11300 PF13296 Putative type VI secretion system Rhs element Vgr KQ251_RS11310 PF03180 NLPA lipoprotein KQ251_RS11315 PF05987 Bacterial protein of unknown function (DUF898) KQ251_RS11330 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ251_RS11330 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KQ251_RS11335 PF00764 Arginosuccinate synthase KQ251_RS11340 PF01590 GAF domain KQ251_RS11340 PF00360 Phytochrome region KQ251_RS11340 PF00563 EAL domain KQ251_RS11340 PF00990 Diguanylate cyclase, GGDEF domain KQ251_RS11345 PF01979 Amidohydrolase family KQ251_RS11350 PF00929 Exonuclease KQ251_RS11360 PF00593 TonB dependent receptor KQ251_RS11360 PF07715 TonB-dependent Receptor Plug Domain KQ251_RS11365 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ251_RS11365 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KQ251_RS11370 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KQ251_RS11370 PF00005 ABC transporter KQ251_RS11375 PF00528 Binding-protein-dependent transport system inner membrane component KQ251_RS11375 PF12911 N-terminal TM domain of oligopeptide transport permease C KQ251_RS11380 PF00528 Binding-protein-dependent transport system inner membrane component KQ251_RS11385 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KQ251_RS11390 PF01464 Transglycosylase SLT domain KQ251_RS11390 PF01464 Transglycosylase SLT domain KQ251_RS11390 PF01476 LysM domain KQ251_RS11390 PF01476 LysM domain KQ251_RS11395 PF00929 Exonuclease KQ251_RS11405 PF00293 NUDIX domain KQ251_RS11405 PF09297 NADH pyrophosphatase zinc ribbon domain KQ251_RS11415 PF04972 BON domain KQ251_RS11420 PF02021 Uncharacterised protein family UPF0102 KQ251_RS11425 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KQ251_RS11435 PF03466 LysR substrate binding domain KQ251_RS11435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_RS11440 PF01810 LysE type translocator KQ251_RS11450 PF13411 MerR HTH family regulatory protein KQ251_RS11460 PF01494 FAD binding domain KQ251_RS11465 PF01494 FAD binding domain KQ251_RS11470 PF05195 Aminopeptidase P, N-terminal domain KQ251_RS11470 PF00557 Metallopeptidase family M24 KQ251_RS11585 PF03869 Arc-like DNA binding domain KQ251_RS11805 PF00145 C-5 cytosine-specific DNA methylase KQ251_RS11820 PF03796 DnaB-like helicase C terminal domain KQ251_RS11820 PF00772 DnaB-like helicase N terminal domain KQ251_RS11920 PF00117 Glutamine amidotransferase class-I KQ251_RS11925 PF11838 ERAP1-like C-terminal domain KQ251_RS11925 PF01433 Peptidase family M1 domain KQ251_RS11930 PF00593 TonB dependent receptor KQ251_RS11930 PF07715 TonB-dependent Receptor Plug Domain KQ251_RS11935 PF00591 Glycosyl transferase family, a/b domain KQ251_RS11935 PF02885 Glycosyl transferase family, helical bundle domain KQ251_RS11940 PF00218 Indole-3-glycerol phosphate synthase KQ251_RS11955 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase KQ251_RS11955 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain KQ251_RS11960 PF00111 2Fe-2S iron-sulfur cluster binding domain KQ251_RS11960 PF01799 [2Fe-2S] binding domain KQ251_RS11965 PF01227 GTP cyclohydrolase I KQ251_RS11975 PF00144 Beta-lactamase KQ251_RS11990 PF05675 Protein of unknown function (DUF817) KQ251_RS11995 PF01208 Uroporphyrinogen decarboxylase (URO-D) KQ251_RS12005 PF00425 chorismate binding enzyme KQ251_RS12015 PF00975 Thioesterase domain KQ251_RS12020 PF00005 ABC transporter KQ251_RS12025 PF00005 ABC transporter KQ251_RS12025 PF00664 ABC transporter transmembrane region KQ251_RS12030 PF00282 Pyridoxal-dependent decarboxylase conserved domain KQ251_RS12035 PF00857 Isochorismatase family KQ251_RS12035 PF00550 Phosphopantetheine attachment site KQ251_RS12040 PF13193 AMP-binding enzyme C-terminal domain KQ251_RS12040 PF00501 AMP-binding enzyme KQ251_RS12045 PF00501 AMP-binding enzyme KQ251_RS12045 PF00550 Phosphopantetheine attachment site KQ251_RS12045 PF00668 Condensation domain KQ251_RS12050 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) KQ251_RS12055 PF00593 TonB dependent receptor KQ251_RS12055 PF07715 TonB-dependent Receptor Plug Domain KQ251_RS12060 PF01497 Periplasmic binding protein KQ251_RS12065 PF00005 ABC transporter KQ251_RS12070 PF01032 FecCD transport family KQ251_RS12075 PF01032 FecCD transport family KQ251_RS12080 PF00668 Condensation domain KQ251_RS12080 PF00550 Phosphopantetheine attachment site KQ251_RS12080 PF00501 AMP-binding enzyme KQ251_RS12080 PF00975 Thioesterase domain KQ251_RS12080 PF13193 AMP-binding enzyme C-terminal domain KQ251_RS12085 PF00501 AMP-binding enzyme KQ251_RS12085 PF13193 AMP-binding enzyme C-terminal domain KQ251_RS12085 PF00668 Condensation domain KQ251_RS12085 PF00550 Phosphopantetheine attachment site KQ251_RS12095 PF13309 HTH domain KQ251_RS12095 PF08348 YheO-like PAS domain KQ251_RS12100 PF00291 Pyridoxal-phosphate dependent enzyme KQ251_RS12105 PF17954 Quercetinase C-terminal cupin domain KQ251_RS12105 PF02678 Pirin KQ251_RS12185 PF00589 Phage integrase family KQ251_RS12185 PF13356 Arm DNA-binding domain KQ251_RS12195 PF04328 Selenoprotein, putative KQ251_RS12200 PF02554 Carbon starvation protein CstA KQ251_RS12200 PF13722 5TM C-terminal transporter carbon starvation CstA KQ251_RS12205 PF08207 Elongation factor P (EF-P) KOW-like domain KQ251_RS12205 PF09285 Elongation factor P, C-terminal KQ251_RS12205 PF01132 Elongation factor P (EF-P) OB domain KQ251_RS12210 PF04055 Radical SAM superfamily KQ251_RS12220 PF12792 CSS motif domain associated with EAL KQ251_RS12220 PF00563 EAL domain KQ251_RS12225 PF01197 Ribosomal protein L31 KQ251_RS12230 PF13593 SBF-like CPA transporter family (DUF4137) KQ251_RS12235 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KQ251_RS12240 PF07690 Major Facilitator Superfamily KQ251_RS12245 PF13654 AAA domain KQ251_RS12245 PF05362 Lon protease (S16) C-terminal proteolytic domain KQ251_RS12250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_RS12250 PF03466 LysR substrate binding domain KQ251_RS12255 PF01476 LysM domain KQ251_RS12255 PF01551 Peptidase family M23 KQ251_RS12260 PF01975 Survival protein SurE KQ251_RS12275 PF07943 Penicillin-binding protein 5, C-terminal domain KQ251_RS12275 PF00768 D-alanyl-D-alanine carboxypeptidase KQ251_RS12280 PF00132 Bacterial transferase hexapeptide (six repeats) KQ251_RS12285 PF00293 NUDIX domain KQ251_RS12285 PF13344 Haloacid dehalogenase-like hydrolase KQ251_RS12295 PF04356 Protein of unknown function (DUF489) KQ251_RS12300 PF00206 Lyase KQ251_RS12300 PF08328 Adenylosuccinate lyase C-terminal KQ251_RS12315 PF08496 Peptidase family S49 N-terminal KQ251_RS12315 PF01343 Peptidase family S49 KQ251_RS12320 PF00005 ABC transporter KQ251_RS12325 PF00528 Binding-protein-dependent transport system inner membrane component KQ251_RS12330 PF00528 Binding-protein-dependent transport system inner membrane component KQ251_RS12335 PF12849 PBP superfamily domain KQ251_RS12340 PF00324 Amino acid permease KQ251_RS12345 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KQ251_RS12345 PF00205 Thiamine pyrophosphate enzyme, central domain KQ251_RS12345 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KQ251_RS12350 PF01037 Lrp/AsnC ligand binding domain KQ251_RS12355 PF00171 Aldehyde dehydrogenase family KQ251_RS12360 PF00282 Pyridoxal-dependent decarboxylase conserved domain KQ251_RS12365 PF00202 Aminotransferase class-III KQ251_RS12375 PF00440 Bacterial regulatory proteins, tetR family KQ251_RS12375 PF17754 MftR C-terminal domain KQ251_RS12385 PF00487 Fatty acid desaturase KQ251_RS12390 PF00111 2Fe-2S iron-sulfur cluster binding domain KQ251_RS12390 PF00970 Oxidoreductase FAD-binding domain KQ251_RS12390 PF00175 Oxidoreductase NAD-binding domain KQ251_RS12395 PF00440 Bacterial regulatory proteins, tetR family KQ251_RS12405 PF00271 Helicase conserved C-terminal domain KQ251_RS12405 PF12137 RNA polymerase recycling family C-terminal KQ251_RS12405 PF18339 RapA N-terminal Tudor like domain 1 KQ251_RS12405 PF00176 SNF2 family N-terminal domain KQ251_RS12405 PF18337 RapA N-terminal Tudor like domain KQ251_RS12410 PF00849 RNA pseudouridylate synthase KQ251_RS12420 PF00202 Aminotransferase class-III KQ251_RS12425 PF02581 Thiamine monophosphate synthase KQ251_RS12450 PF00675 Insulinase (Peptidase family M16) KQ251_RS12450 PF05193 Peptidase M16 inactive domain KQ251_RS12455 PF02567 Phenazine biosynthesis-like protein KQ251_RS12460 PF00375 Sodium:dicarboxylate symporter family KQ251_RS12465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_RS12465 PF03466 LysR substrate binding domain KQ251_RS12470 PF06779 Uncharacterised MFS-type transporter YbfB KQ251_RS12490 PF00180 Isocitrate/isopropylmalate dehydrogenase KQ251_RS12495 PF00849 RNA pseudouridylate synthase KQ251_RS12500 PF03971 Monomeric isocitrate dehydrogenase KQ251_RS12510 PF00768 D-alanyl-D-alanine carboxypeptidase KQ251_RS12510 PF07943 Penicillin-binding protein 5, C-terminal domain KQ251_RS12515 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ251_RS12520 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KQ251_RS12525 PF00875 DNA photolyase KQ251_RS12525 PF03441 FAD binding domain of DNA photolyase KQ251_RS12555 PF02350 UDP-N-acetylglucosamine 2-epimerase KQ251_RS12570 PF03060 Nitronate monooxygenase KQ251_RS12575 PF01207 Dihydrouridine synthase (Dus) KQ251_RS12580 PF07759 Protein of unknown function (DUF1615) KQ251_RS12590 PF01472 PUA domain KQ251_RS12590 PF00696 Amino acid kinase family KQ251_RS12595 PF01018 GTP1/OBG KQ251_RS12595 PF01926 50S ribosome-binding GTPase KQ251_RS12610 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KQ251_RS12610 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KQ251_RS12615 PF00892 EamA-like transporter family KQ251_RS12625 PF00271 Helicase conserved C-terminal domain KQ251_RS12625 PF04851 Type III restriction enzyme, res subunit KQ251_RS12625 PF02151 UvrB/uvrC motif KQ251_RS12625 PF12344 Ultra-violet resistance protein B KQ251_RS12625 PF17757 UvrB interaction domain KQ251_RS12635 PF17151 Periplasmic sensor domain KQ251_RS12635 PF00990 Diguanylate cyclase, GGDEF domain KQ251_RS12645 PF00155 Aminotransferase class I and II KQ251_RS12675 PF00106 short chain dehydrogenase KQ251_RS12680 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) KQ251_RS12685 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ KQ251_RS12690 PF02565 Recombination protein O C terminal KQ251_RS12690 PF11967 Recombination protein O N terminal KQ251_RS12700 PF01926 50S ribosome-binding GTPase KQ251_RS12700 PF07650 KH domain KQ251_RS12705 PF14622 Ribonuclease-III-like KQ251_RS12705 PF00035 Double-stranded RNA binding motif KQ251_RS12715 PF10502 Signal peptidase, peptidase S26 KQ251_RS12720 PF06421 GTP-binding protein LepA C-terminus KQ251_RS12720 PF03144 Elongation factor Tu domain 2 KQ251_RS12720 PF00009 Elongation factor Tu GTP binding domain KQ251_RS12720 PF00679 Elongation factor G C-terminus KQ251_RS12725 PF13302 Acetyltransferase (GNAT) domain KQ251_RS12735 PF13180 PDZ domain KQ251_RS12740 PF00890 FAD binding domain KQ251_RS12740 PF02910 Fumarate reductase flavoprotein C-term KQ251_RS12750 PF02223 Thymidylate kinase KQ251_RS12755 PF02618 YceG-like family KQ251_RS12760 PF01063 Amino-transferase class IV KQ251_RS12775 PF00528 Binding-protein-dependent transport system inner membrane component KQ251_RS12780 PF00528 Binding-protein-dependent transport system inner membrane component KQ251_RS12785 PF12857 TOBE-like domain KQ251_RS12785 PF00005 ABC transporter KQ251_RS12790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_RS12790 PF03466 LysR substrate binding domain KQ251_RS12800 PF00132 Bacterial transferase hexapeptide (six repeats) KQ251_RS12800 PF14602 Hexapeptide repeat of succinyl-transferase KQ251_RS12800 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal KQ251_RS12810 PF06508 Queuosine biosynthesis protein QueC KQ251_RS12825 PF00578 AhpC/TSA family KQ251_RS12835 PF00293 NUDIX domain KQ251_RS12835 PF01467 Cytidylyltransferase-like KQ251_RS12840 PF00378 Enoyl-CoA hydratase/isomerase KQ251_RS12845 PF01784 NIF3 (NGG1p interacting factor 3) KQ251_RS12855 PF07690 Major Facilitator Superfamily KQ251_RS12860 PF02769 AIR synthase related protein, C-terminal domain KQ251_RS12860 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain KQ251_RS12860 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal KQ251_RS12865 PF01966 HD domain KQ251_RS12870 PF07499 RuvA, C-terminal domain KQ251_RS12870 PF01330 RuvA N terminal domain KQ251_RS12875 PF17864 RuvB AAA lid domain KQ251_RS12875 PF05491 RuvB C-terminal winged helix domain KQ251_RS12875 PF05496 Holliday junction DNA helicase RuvB P-loop domain KQ251_RS12880 PF07687 Peptidase dimerisation domain KQ251_RS12880 PF01546 Peptidase family M20/M25/M40 KQ251_RS12885 PF03061 Thioesterase superfamily KQ251_RS12890 PF01618 MotA/TolQ/ExbB proton channel family KQ251_RS12895 PF02472 Biopolymer transport protein ExbD/TolR KQ251_RS12905 PF07676 WD40-like Beta Propeller Repeat KQ251_RS12905 PF04052 TolB amino-terminal domain KQ251_RS12910 PF00691 OmpA family KQ251_RS12920 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain KQ251_RS12925 PF00588 SpoU rRNA Methylase family KQ251_RS12925 PF08032 RNA 2'-O ribose methyltransferase substrate binding KQ251_RS12955 PF11638 DnaA N-terminal domain KQ251_RS12955 PF00308 Bacterial dnaA protein KQ251_RS12955 PF08299 Bacterial dnaA protein helix-turn-helix KQ251_RS12960 PF01594 AI-2E family transporter KQ251_RS12965 PF02769 AIR synthase related protein, C-terminal domain KQ251_RS12965 PF00586 AIR synthase related protein, N-terminal domain KQ251_RS12970 PF00551 Formyl transferase KQ251_RS12975 PF12697 Alpha/beta hydrolase family KQ251_RS12980 PF06965 Na+/H+ antiporter 1 KQ251_RS12980 PF01343 Peptidase family S49 KQ251_RS12995 PF00005 ABC transporter KQ251_RS13000 PF02687 FtsX-like permease family KQ251_RS13000 PF12704 MacB-like periplasmic core domain KQ251_RS13010 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 KQ251_RS13025 PF00266 Aminotransferase class-V KQ251_RS13035 PF13533 Biotin-lipoyl like KQ251_RS13055 PF00535 Glycosyl transferase family 2 KQ251_RS13070 PF00521 DNA gyrase/topoisomerase IV, subunit A KQ251_RS13070 PF03989 DNA gyrase C-terminal domain, beta-propeller KQ251_RS13075 PF00766 Electron transfer flavoprotein FAD-binding domain KQ251_RS13075 PF01012 Electron transfer flavoprotein domain KQ251_RS13080 PF01012 Electron transfer flavoprotein domain KQ251_RS13085 PF00589 Phage integrase family KQ251_RS13085 PF02899 Phage integrase, N-terminal SAM-like domain KQ251_RS13090 PF01810 LysE type translocator KQ251_RS13095 PF01678 Diaminopimelate epimerase KQ251_RS13100 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KQ251_RS13100 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KQ251_RS13110 PF00324 Amino acid permease KQ251_RS13115 PF18073 Rubredoxin metal binding domain KQ251_RS13125 PF00152 tRNA synthetases class II (D, K and N) KQ251_RS13130 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KQ251_RS13130 PF11890 Domain of unknown function (DUF3410) KQ251_RS13130 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KQ251_RS13135 PF06803 Protein of unknown function (DUF1232) KQ251_RS13140 PF02634 FdhD/NarQ family KQ251_RS13145 PF00384 Molybdopterin oxidoreductase KQ251_RS13150 PF02595 Glycerate kinase family KQ251_RS13170 PF00665 Integrase core domain KQ251_RS13170 PF13936 Helix-turn-helix domain KQ251_RS13195 PF09857 Putative toxin of bacterial toxin-antitoxin pair KQ251_RS13205 PF00975 Thioesterase domain KQ251_RS13205 PF00550 Phosphopantetheine attachment site KQ251_RS13205 PF00668 Condensation domain KQ251_RS13205 PF13193 AMP-binding enzyme C-terminal domain KQ251_RS13205 PF00501 AMP-binding enzyme KQ251_RS13220 PF01272 Transcription elongation factor, GreA/GreB, C-term KQ251_RS13220 PF03449 Transcription elongation factor, N-terminal KQ251_RS13225 PF00497 Bacterial extracellular solute-binding proteins, family 3 KQ251_RS13225 PF01464 Transglycosylase SLT domain KQ251_RS13235 PF01171 PP-loop family KQ251_RS13240 PF01464 Transglycosylase SLT domain KQ251_RS13245 PF01435 Peptidase family M48 KQ251_RS13255 PF00873 AcrB/AcrD/AcrF family KQ251_RS13260 PF03009 Glycerophosphoryl diester phosphodiesterase family KQ251_RS13265 PF00753 Metallo-beta-lactamase superfamily KQ251_RS13270 PF01219 Prokaryotic diacylglycerol kinase KQ251_RS13295 PF01757 Acyltransferase family KQ251_RS13295 PF00842 Alanine racemase, C-terminal domain KQ251_RS13295 PF01168 Alanine racemase, N-terminal domain KQ251_RS13310 PF00118 TCP-1/cpn60 chaperonin family KQ251_RS13315 PF00166 Chaperonin 10 Kd subunit KQ251_RS13325 PF00149 Calcineurin-like phosphoesterase KQ251_RS13330 PF00781 Diacylglycerol kinase catalytic domain KQ251_RS13335 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain KQ251_RS13335 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain KQ251_RS13340 PF01266 FAD dependent oxidoreductase KQ251_RS13340 PF16901 C-terminal domain of alpha-glycerophosphate oxidase KQ251_RS13345 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KQ251_RS13345 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KQ251_RS13350 PF00083 Sugar (and other) transporter KQ251_RS13365 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KQ251_RS13365 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain KQ251_RS13380 PF09423 PhoD-like phosphatase KQ251_RS13380 PF16655 PhoD-like phosphatase, N-terminal domain KQ251_RS13400 PF00809 Pterin binding enzyme KQ251_RS13405 PF00004 ATPase family associated with various cellular activities (AAA) KQ251_RS13405 PF17862 AAA+ lid domain KQ251_RS13405 PF06480 FtsH Extracellular KQ251_RS13405 PF01434 Peptidase family M41 KQ251_RS13410 PF01728 FtsJ-like methyltransferase KQ251_RS13415 PF01985 CRS1 / YhbY (CRM) domain KQ251_RS13430 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KQ251_RS13430 PF00117 Glutamine amidotransferase class-I KQ251_RS13435 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KQ251_RS13435 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KQ251_RS13435 PF02142 MGS-like domain KQ251_RS13440 PF01272 Transcription elongation factor, GreA/GreB, C-term KQ251_RS13440 PF03449 Transcription elongation factor, N-terminal KQ251_RS13450 PF01042 Endoribonuclease L-PSP KQ251_RS13455 PF00132 Bacterial transferase hexapeptide (six repeats) KQ251_RS13460 PF00582 Universal stress protein family KQ251_RS13465 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KQ251_RS13475 PF09587 Bacterial capsule synthesis protein PGA_cap KQ251_RS13490 PF00999 Sodium/hydrogen exchanger family KQ251_RS13495 PF04228 Putative neutral zinc metallopeptidase KQ251_RS13500 PF05661 Protein of unknown function (DUF808) KQ251_RS13505 PF00579 tRNA synthetases class I (W and Y) KQ251_RS13510 PF02629 CoA binding domain KQ251_RS13510 PF00549 CoA-ligase KQ251_RS13515 PF08442 ATP-grasp domain KQ251_RS13515 PF00549 CoA-ligase KQ251_RS13520 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ251_RS13520 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KQ251_RS13525 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KQ251_RS13525 PF02817 e3 binding domain KQ251_RS13525 PF00364 Biotin-requiring enzyme KQ251_RS13530 PF00676 Dehydrogenase E1 component KQ251_RS13530 PF16078 2-oxoglutarate dehydrogenase N-terminus KQ251_RS13530 PF02779 Transketolase, pyrimidine binding domain KQ251_RS13530 PF16870 2-oxoglutarate dehydrogenase C-terminal KQ251_RS13545 PF13085 2Fe-2S iron-sulfur cluster binding domain KQ251_RS13550 PF02910 Fumarate reductase flavoprotein C-term KQ251_RS13550 PF00890 FAD binding domain KQ251_RS13555 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KQ251_RS13560 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KQ251_RS13565 PF00285 Citrate synthase, C-terminal domain KQ251_RS13575 PF00581 Rhodanese-like domain KQ251_RS13575 PF17773 UPF0176 acylphosphatase like domain KQ251_RS13590 PF03979 Sigma-70 factor, region 1.1 KQ251_RS13590 PF04546 Sigma-70, non-essential region KQ251_RS13590 PF04542 Sigma-70 region 2 KQ251_RS13590 PF04545 Sigma-70, region 4 KQ251_RS13590 PF04539 Sigma-70 region 3 KQ251_RS13590 PF00140 Sigma-70 factor, region 1.2 KQ251_RS13595 PF04359 Protein of unknown function (DUF493) KQ251_RS13600 PF03099 Biotin/lipoate A/B protein ligase family KQ251_RS13610 PF00465 Iron-containing alcohol dehydrogenase KQ251_RS13615 PF13520 Amino acid permease KQ251_RS13620 PF03358 NADPH-dependent FMN reductase KQ251_RS13625 PF01638 HxlR-like helix-turn-helix KQ251_RS13630 PF00588 SpoU rRNA Methylase family KQ251_RS13635 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KQ251_RS13635 PF10414 Sirohaem synthase dimerisation region KQ251_RS13635 PF14824 Sirohaem biosynthesis protein central KQ251_RS13640 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KQ251_RS13640 PF02403 Seryl-tRNA synthetase N-terminal domain KQ251_RS13650 PF03548 Outer membrane lipoprotein carrier protein LolA KQ251_RS13655 PF01016 Ribosomal L27 protein KQ251_RS13660 PF00829 Ribosomal prokaryotic L21 protein KQ251_RS13670 PF00348 Polyprenyl synthetase KQ251_RS13680 PF01569 PAP2 superfamily KQ251_RS13685 PF00529 HlyD membrane-fusion protein of T1SS KQ251_RS13685 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KQ251_RS13690 PF00873 AcrB/AcrD/AcrF family KQ251_RS13695 PF02321 Outer membrane efflux protein KQ251_RS13700 PF01906 Putative heavy-metal-binding KQ251_RS13705 PF01906 Putative heavy-metal-binding KQ251_RS13725 PF08264 Anticodon-binding domain of tRNA KQ251_RS13725 PF00133 tRNA synthetases class I (I, L, M and V) KQ251_RS13725 PF10458 Valyl tRNA synthetase tRNA binding arm KQ251_RS13745 PF03466 LysR substrate binding domain KQ251_RS13745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_RS13750 PF00909 Ammonium Transporter Family KQ251_RS13760 PF00512 His Kinase A (phospho-acceptor) domain KQ251_RS13760 PF08521 Two-component sensor kinase N-terminal KQ251_RS13760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ251_RS13765 PF00486 Transcriptional regulatory protein, C terminal KQ251_RS13765 PF00072 Response regulator receiver domain KQ251_RS13770 PF08019 Phosphoethanolamine transferase EptA/EptB KQ251_RS13770 PF00884 Sulfatase KQ251_RS13790 PF01734 Patatin-like phospholipase KQ251_RS13800 PF01145 SPFH domain / Band 7 family KQ251_RS13805 PF04237 YjbR KQ251_RS13810 PF00348 Polyprenyl synthetase KQ251_RS13815 PF04303 PrpF protein KQ251_RS13820 PF00324 Amino acid permease KQ251_RS13830 PF01965 DJ-1/PfpI family KQ251_RS13835 PF14765 Polyketide synthase dehydratase KQ251_RS13835 PF00550 Phosphopantetheine attachment site KQ251_RS13835 PF08659 KR domain KQ251_RS13835 PF00109 Beta-ketoacyl synthase, N-terminal domain KQ251_RS13835 PF16197 Ketoacyl-synthetase C-terminal extension KQ251_RS13835 PF09277 Erythronolide synthase, docking KQ251_RS13835 PF00698 Acyl transferase domain KQ251_RS13835 PF08240 Alcohol dehydrogenase GroES-like domain KQ251_RS13835 PF08990 Erythronolide synthase docking KQ251_RS13835 PF02801 Beta-ketoacyl synthase, C-terminal domain KQ251_RS13840 PF12833 Helix-turn-helix domain KQ251_RS13840 PF06719 AraC-type transcriptional regulator N-terminus KQ251_RS13845 PF02673 Bacitracin resistance protein BacA KQ251_RS13865 PF02525 Flavodoxin-like fold KQ251_RS13880 PF01507 Phosphoadenosine phosphosulfate reductase family KQ251_RS13885 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain KQ251_RS13885 PF06974 Protein of unknown function (DUF1298) KQ251_RS13895 PF10150 Ribonuclease E/G family KQ251_RS13895 PF00575 S1 RNA binding domain KQ251_RS13900 PF02545 Maf-like protein KQ251_RS13905 PF04093 rod shape-determining protein MreD KQ251_RS13910 PF04085 rod shape-determining protein MreC KQ251_RS13920 PF02686 Glu-tRNAGln amidotransferase C subunit KQ251_RS13925 PF01425 Amidase KQ251_RS13930 PF02934 GatB/GatE catalytic domain KQ251_RS13930 PF02637 GatB domain KQ251_RS13955 PF05992 SbmA/BacA-like family KQ251_RS13960 PF13291 ACT domain KQ251_RS13960 PF00291 Pyridoxal-phosphate dependent enzyme KQ251_RS13965 PF01734 Patatin-like phospholipase KQ251_RS13970 PF01235 Sodium:alanine symporter family KQ251_RS13985 PF00881 Nitroreductase family KQ251_RS13990 PF07690 Major Facilitator Superfamily KQ251_RS13995 PF12805 FUSC-like inner membrane protein yccS KQ251_RS14005 PF00667 FAD binding domain KQ251_RS14005 PF00258 Flavodoxin KQ251_RS14005 PF00175 Oxidoreductase NAD-binding domain KQ251_RS14045 PF17969 L,D-transpeptidase C-terminal domain KQ251_RS14045 PF03734 L,D-transpeptidase catalytic domain KQ251_RS14050 PF04304 Protein of unknown function (DUF454) KQ251_RS14060 PF08085 Entericidin EcnA/B family KQ251_RS14065 PF07687 Peptidase dimerisation domain KQ251_RS14065 PF01546 Peptidase family M20/M25/M40 KQ251_RS14075 PF01584 CheW-like domain KQ251_RS14075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ251_RS14075 PF00072 Response regulator receiver domain KQ251_RS14075 PF01627 Hpt domain KQ251_RS14080 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term KQ251_RS14080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KQ251_RS14085 PF01584 CheW-like domain KQ251_RS14090 PF00072 Response regulator receiver domain KQ251_RS14095 PF00072 Response regulator receiver domain KQ251_RS14110 PF00873 AcrB/AcrD/AcrF family KQ251_RS14115 PF03129 Anticodon binding domain KQ251_RS14115 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KQ251_RS14115 PF04073 Aminoacyl-tRNA editing domain KQ251_RS14120 PF07411 Domain of unknown function (DUF1508) KQ251_RS14125 PF03831 PhnA domain KQ251_RS14125 PF08274 PhnA Zinc-Ribbon KQ251_RS14130 PF04343 Protein of unknown function, DUF488 KQ251_RS14140 PF01571 Aminomethyltransferase folate-binding domain KQ251_RS14145 PF13098 Thioredoxin-like domain KQ251_RS14145 PF10411 Disulfide bond isomerase protein N-terminus KQ251_RS14155 PF03547 Membrane transport protein KQ251_RS14160 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KQ251_RS14165 PF07715 TonB-dependent Receptor Plug Domain KQ251_RS14165 PF00593 TonB dependent receptor KQ251_RS14170 PF02245 Methylpurine-DNA glycosylase (MPG) KQ251_RS14175 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KQ251_RS14175 PF06827 Zinc finger found in FPG and IleRS KQ251_RS14175 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KQ251_RS14190 PF01741 Large-conductance mechanosensitive channel, MscL KQ251_RS14195 PF00009 Elongation factor Tu GTP binding domain KQ251_RS14195 PF00679 Elongation factor G C-terminus KQ251_RS14195 PF03144 Elongation factor Tu domain 2 KQ251_RS14200 PF00860 Permease family KQ251_RS14205 PF05175 Methyltransferase small domain KQ251_RS14205 PF08468 Methyltransferase small domain N-terminal KQ251_RS14210 PF00324 Amino acid permease KQ251_RS14215 PF01139 tRNA-splicing ligase RtcB KQ251_RS14225 PF13505 Outer membrane protein beta-barrel domain KQ251_RS14225 PF00691 OmpA family KQ251_RS14235 PF00108 Thiolase, N-terminal domain KQ251_RS14235 PF02803 Thiolase, C-terminal domain KQ251_RS14245 PF00893 Small Multidrug Resistance protein KQ251_RS14255 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KQ251_RS14255 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KQ251_RS14260 PF01011 PQQ enzyme repeat KQ251_RS14265 PF04966 Carbohydrate-selective porin, OprB family KQ251_RS14270 PF02515 CoA-transferase family III KQ251_RS14275 PF02311 AraC-like ligand binding domain KQ251_RS14275 PF12833 Helix-turn-helix domain KQ251_RS14280 PF02803 Thiolase, C-terminal domain KQ251_RS14280 PF00108 Thiolase, N-terminal domain KQ251_RS14285 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KQ251_RS14285 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KQ251_RS14285 PF00378 Enoyl-CoA hydratase/isomerase KQ251_RS14310 PF03006 Haemolysin-III related KQ251_RS14315 PF07690 Major Facilitator Superfamily KQ251_RS14315 PF00083 Sugar (and other) transporter KQ251_RS14325 PF02810 SEC-C motif KQ251_RS14325 PF01043 SecA preprotein cross-linking domain KQ251_RS14325 PF07517 SecA DEAD-like domain KQ251_RS14325 PF07516 SecA Wing and Scaffold domain KQ251_RS14330 PF00578 AhpC/TSA family KQ251_RS14330 PF10417 C-terminal domain of 1-Cys peroxiredoxin KQ251_RS14335 PF00753 Metallo-beta-lactamase superfamily KQ251_RS14350 PF08245 Mur ligase middle domain KQ251_RS14350 PF02875 Mur ligase family, glutamate ligase domain KQ251_RS14355 PF01039 Carboxyl transferase domain KQ251_RS14360 PF00290 Tryptophan synthase alpha chain KQ251_RS14385 PF00291 Pyridoxal-phosphate dependent enzyme KQ251_RS14390 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase KQ251_RS14395 PF07715 TonB-dependent Receptor Plug Domain KQ251_RS14395 PF00593 TonB dependent receptor KQ251_RS14400 PF01923 Cobalamin adenosyltransferase KQ251_RS14405 PF03009 Glycerophosphoryl diester phosphodiesterase family KQ251_RS14420 PF02696 Uncharacterized ACR, YdiU/UPF0061 family KQ251_RS14425 PF00072 Response regulator receiver domain KQ251_RS14425 PF00486 Transcriptional regulatory protein, C terminal KQ251_RS14430 PF00672 HAMP domain KQ251_RS14430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ251_RS14430 PF00512 His Kinase A (phospho-acceptor) domain KQ251_RS14440 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ251_RS14440 PF12806 Acetyl-CoA dehydrogenase C-terminal like KQ251_RS14440 PF02770 Acyl-CoA dehydrogenase, middle domain KQ251_RS14440 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ251_RS14445 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ251_RS14445 PF02770 Acyl-CoA dehydrogenase, middle domain KQ251_RS14445 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ251_RS14445 PF12806 Acetyl-CoA dehydrogenase C-terminal like KQ251_RS14450 PF06146 Phosphate-starvation-inducible E KQ251_RS14470 PF07715 TonB-dependent Receptor Plug Domain KQ251_RS14470 PF00593 TonB dependent receptor KQ251_RS14480 PF02938 GAD domain KQ251_RS14480 PF00152 tRNA synthetases class II (D, K and N) KQ251_RS14480 PF01336 OB-fold nucleic acid binding domain KQ251_RS14485 PF17101 Stealth protein CR1, conserved region 1 KQ251_RS14485 PF17102 Stealth protein CR3, conserved region 3 KQ251_RS14485 PF11380 Stealth protein CR2, conserved region 2 KQ251_RS14510 PF00534 Glycosyl transferases group 1 KQ251_RS14510 PF13439 Glycosyltransferase Family 4 KQ251_RS14515 PF00535 Glycosyl transferase family 2 KQ251_RS14520 PF01522 Polysaccharide deacetylase KQ251_RS14535 PF01063 Amino-transferase class IV KQ251_RS14540 PF08335 GlnD PII-uridylyltransferase KQ251_RS14540 PF03710 Glutamate-ammonia ligase adenylyltransferase KQ251_RS14545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ251_RS14545 PF00512 His Kinase A (phospho-acceptor) domain KQ251_RS14545 PF07689 KaiB domain KQ251_RS14615 PF01471 Putative peptidoglycan binding domain KQ251_RS14615 PF01510 N-acetylmuramoyl-L-alanine amidase KQ251_RS14710 PF13438 Domain of unknown function (DUF4113) KQ251_RS14710 PF00817 impB/mucB/samB family KQ251_RS14710 PF11799 impB/mucB/samB family C-terminal domain KQ251_RS14710 PF11798 IMS family HHH motif KQ251_RS14715 PF00717 Peptidase S24-like KQ251_RS14730 PF13737 Transposase DDE domain KQ251_RS14790 PF02547 Queuosine biosynthesis protein KQ251_RS14805 PF01702 Queuine tRNA-ribosyltransferase KQ251_RS14810 PF02699 Preprotein translocase subunit KQ251_RS14815 PF07549 SecD/SecF GG Motif KQ251_RS14815 PF13721 SecD export protein N-terminal TM region KQ251_RS14815 PF02355 Protein export membrane protein KQ251_RS14820 PF07549 SecD/SecF GG Motif KQ251_RS14820 PF02355 Protein export membrane protein KQ251_RS14825 PF02441 Flavoprotein KQ251_RS14825 PF04127 DNA / pantothenate metabolism flavoprotein KQ251_RS14830 PF04002 RadC-like JAB domain KQ251_RS14835 PF01062 Bestrophin, RFP-TM, chloride channel KQ251_RS14840 PF02811 PHP domain KQ251_RS14845 PF04279 Intracellular septation protein A KQ251_RS14850 PF03795 YCII-related domain KQ251_RS14860 PF01266 FAD dependent oxidoreductase KQ251_RS14860 PF05430 S-adenosyl-L-methionine-dependent methyltransferase KQ251_RS14870 PF04461 Protein of unknown function (DUF520) KQ251_RS14880 PF03061 Thioesterase superfamily KQ251_RS14885 PF00085 Thioredoxin KQ251_RS14890 PF00561 alpha/beta hydrolase fold KQ251_RS14895 PF04273 Putative phosphatase (DUF442) KQ251_RS14895 PF00753 Metallo-beta-lactamase superfamily KQ251_RS14905 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ251_RS14905 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KQ251_RS14940 PF17152 Periplasmic sensor domain KQ251_RS14940 PF00990 Diguanylate cyclase, GGDEF domain KQ251_RS14945 PF00691 OmpA family KQ251_RS14945 PF01389 OmpA-like transmembrane domain KQ251_RS14950 PF00149 Calcineurin-like phosphoesterase KQ251_RS14950 PF10518 TAT (twin-arginine translocation) pathway signal sequence KQ251_RS14955 PF13091 PLD-like domain KQ251_RS14965 PF16360 GTP-binding GTPase Middle Region KQ251_RS14965 PF01926 50S ribosome-binding GTPase KQ251_RS14965 PF13167 GTP-binding GTPase N-terminal KQ251_RS14985 PF00149 Calcineurin-like phosphoesterase KQ251_RS14990 PF00398 Ribosomal RNA adenine dimethylase KQ251_RS14995 PF04166 Pyridoxal phosphate biosynthetic protein PdxA KQ251_RS15000 PF00572 Ribosomal protein L13 KQ251_RS15005 PF00380 Ribosomal protein S9/S16 KQ251_RS15010 PF00043 Glutathione S-transferase, C-terminal domain KQ251_RS15010 PF13417 Glutathione S-transferase, N-terminal domain KQ251_RS15015 PF04386 Stringent starvation protein B KQ251_RS15025 PF02785 Biotin carboxylase C-terminal domain KQ251_RS15025 PF00289 Biotin carboxylase, N-terminal domain KQ251_RS15025 PF00364 Biotin-requiring enzyme KQ251_RS15025 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KQ251_RS15035 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ251_RS15035 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ251_RS15035 PF02770 Acyl-CoA dehydrogenase, middle domain KQ251_RS15045 PF13737 Transposase DDE domain KQ251_RS15065 PF17932 Tetracyclin repressor-like, C-terminal domain KQ251_RS15065 PF00440 Bacterial regulatory proteins, tetR family KQ251_RS15070 PF02770 Acyl-CoA dehydrogenase, middle domain KQ251_RS15070 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ251_RS15070 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ251_RS15115 PF01066 CDP-alcohol phosphatidyltransferase KQ251_RS15120 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ KQ251_RS15140 PF00056 lactate/malate dehydrogenase, NAD binding domain KQ251_RS15140 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KQ251_RS15150 PF10145 Phage-related minor tail protein KQ251_RS15150 PF01551 Peptidase family M23 KQ251_RS15150 PF01464 Transglycosylase SLT domain KQ251_RS15155 PF04055 Radical SAM superfamily KQ251_RS15155 PF01938 TRAM domain KQ251_RS15155 PF00919 Uncharacterized protein family UPF0004 KQ251_RS15160 PF02562 PhoH-like protein KQ251_RS15165 PF02130 Uncharacterized protein family UPF0054 KQ251_RS15190 PF03358 NADPH-dependent FMN reductase KQ251_RS15195 PF03631 Virulence factor BrkB KQ251_RS15200 PF00892 EamA-like transporter family KQ251_RS15205 PF12833 Helix-turn-helix domain KQ251_RS15210 PF01557 Fumarylacetoacetate (FAA) hydrolase family KQ251_RS15255 PF17876 Cold shock domain KQ251_RS15255 PF08461 Ribonuclease R winged-helix domain KQ251_RS15255 PF08206 Ribonuclease B OB domain KQ251_RS15255 PF00773 RNB domain KQ251_RS15255 PF00575 S1 RNA binding domain KQ251_RS15260 PF01432 Peptidase family M3 KQ251_RS15265 PF09526 Probable metal-binding protein (DUF2387) KQ251_RS15295 PF03937 Flavinator of succinate dehydrogenase KQ251_RS15300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ251_RS15300 PF02770 Acyl-CoA dehydrogenase, middle domain KQ251_RS15300 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ251_RS15305 PF00743 Flavin-binding monooxygenase-like KQ251_RS15310 PF01196 Ribosomal protein L17 KQ251_RS15315 PF01000 RNA polymerase Rpb3/RpoA insert domain KQ251_RS15315 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain KQ251_RS15315 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain KQ251_RS15320 PF00163 Ribosomal protein S4/S9 N-terminal domain KQ251_RS15320 PF01479 S4 domain KQ251_RS15325 PF00411 Ribosomal protein S11 KQ251_RS15330 PF00416 Ribosomal protein S13/S18 KQ251_RS15335 PF00444 Ribosomal protein L36 KQ251_RS15340 PF00344 SecY translocase KQ251_RS15345 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A KQ251_RS15350 PF00327 Ribosomal protein L30p/L7e KQ251_RS15355 PF03719 Ribosomal protein S5, C-terminal domain KQ251_RS15355 PF00333 Ribosomal protein S5, N-terminal domain KQ251_RS15360 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast KQ251_RS15365 PF00347 Ribosomal protein L6 KQ251_RS15370 PF00410 Ribosomal protein S8 KQ251_RS15375 PF00253 Ribosomal protein S14p/S29e KQ251_RS15380 PF00673 ribosomal L5P family C-terminus KQ251_RS15380 PF00281 Ribosomal protein L5 KQ251_RS15385 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 KQ251_RS15385 PF00467 KOW motif KQ251_RS15390 PF00238 Ribosomal protein L14p/L23e KQ251_RS15395 PF00366 Ribosomal protein S17 KQ251_RS15400 PF00831 Ribosomal L29 protein KQ251_RS15405 PF00252 Ribosomal protein L16p/L10e KQ251_RS15415 PF00237 Ribosomal protein L22p/L17e KQ251_RS15420 PF00203 Ribosomal protein S19 KQ251_RS15425 PF00181 Ribosomal Proteins L2, RNA binding domain KQ251_RS15425 PF03947 Ribosomal Proteins L2, C-terminal domain KQ251_RS15430 PF00276 Ribosomal protein L23 KQ251_RS15435 PF00573 Ribosomal protein L4/L1 family KQ251_RS15440 PF00297 Ribosomal protein L3 KQ251_RS15445 PF00338 Ribosomal protein S10p/S20e KQ251_RS15450 PF00117 Glutamine amidotransferase class-I KQ251_RS15455 PF01053 Cys/Met metabolism PLP-dependent enzyme KQ251_RS15460 PF05872 Bacterial protein of unknown function (DUF853) KQ251_RS15470 PF00970 Oxidoreductase FAD-binding domain KQ251_RS15470 PF00042 Globin KQ251_RS15470 PF00175 Oxidoreductase NAD-binding domain KQ251_RS15475 PF02082 Transcriptional regulator KQ251_RS15480 PF01926 50S ribosome-binding GTPase KQ251_RS15490 PF00375 Sodium:dicarboxylate symporter family KQ251_RS15500 PF01553 Acyltransferase KQ251_RS15515 PF00271 Helicase conserved C-terminal domain KQ251_RS15515 PF00270 DEAD/DEAH box helicase KQ251_RS15515 PF17191 RecG wedge domain KQ251_RS15520 PF00156 Phosphoribosyl transferase domain KQ251_RS15525 PF00293 NUDIX domain KQ251_RS15530 PF03641 Possible lysine decarboxylase KQ251_RS15535 PF01544 CorA-like Mg2+ transporter protein KQ251_RS15545 PF05494 MlaC protein KQ251_RS15555 PF02405 Permease MlaE KQ251_RS15560 PF00005 ABC transporter KQ251_RS15570 PF00271 Helicase conserved C-terminal domain KQ251_RS15570 PF12343 Cold shock protein DEAD box A KQ251_RS15570 PF00270 DEAD/DEAH box helicase KQ251_RS15570 PF03880 DbpA RNA binding domain KQ251_RS15575 PF00459 Inositol monophosphatase family KQ251_RS15580 PF13292 1-deoxy-D-xylulose-5-phosphate synthase KQ251_RS15580 PF02780 Transketolase, C-terminal domain KQ251_RS15580 PF02779 Transketolase, pyrimidine binding domain KQ251_RS15585 PF00925 GTP cyclohydrolase II KQ251_RS15590 PF01218 Coproporphyrinogen III oxidase KQ251_RS15595 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KQ251_RS15595 PF01488 Shikimate / quinate 5-dehydrogenase KQ251_RS15595 PF08501 Shikimate dehydrogenase substrate binding domain KQ251_RS15605 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ251_RS15605 PF02770 Acyl-CoA dehydrogenase, middle domain KQ251_RS15605 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ251_RS15605 PF12806 Acetyl-CoA dehydrogenase C-terminal like KQ251_RS15615 PF04024 PspC domain KQ251_RS15620 PF00571 CBS domain KQ251_RS15645 PF02091 Glycyl-tRNA synthetase alpha subunit KQ251_RS15650 PF02092 Glycyl-tRNA synthetase beta subunit KQ251_RS15650 PF05746 DALR anticodon binding domain KQ251_RS15660 PF00892 EamA-like transporter family KQ251_RS15665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_RS15665 PF03466 LysR substrate binding domain KQ251_RS15680 PF05922 Peptidase inhibitor I9 KQ251_RS15680 PF00082 Subtilase family KQ251_RS15695 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family KQ251_RS15700 PF04996 Succinylarginine dihydrolase KQ251_RS15705 PF00171 Aldehyde dehydrogenase family KQ251_RS15710 PF04958 Arginine N-succinyltransferase beta subunit KQ251_RS15715 PF00202 Aminotransferase class-III KQ251_RS15720 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KQ251_RS15720 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KQ251_RS15725 PF00324 Amino acid permease KQ251_RS15730 PF13936 Helix-turn-helix domain KQ251_RS15730 PF00665 Integrase core domain KQ251_RS15740 PF08241 Methyltransferase domain KQ251_RS15760 PF13614 AAA domain KQ251_RS15765 PF01594 AI-2E family transporter KQ251_RS15770 PF00080 Copper/zinc superoxide dismutase (SODC) KQ251_RS15775 PF12805 FUSC-like inner membrane protein yccS KQ251_RS15780 PF07690 Major Facilitator Superfamily KQ251_RS15790 PF02525 Flavodoxin-like fold KQ251_RS15795 PF03992 Antibiotic biosynthesis monooxygenase KQ251_RS15805 PF02913 FAD linked oxidases, C-terminal domain KQ251_RS15805 PF01565 FAD binding domain KQ251_RS15810 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KQ251_RS15810 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KQ251_RS15815 PF00892 EamA-like transporter family KQ251_RS15820 PF00892 EamA-like transporter family KQ251_RS15830 PF01925 Sulfite exporter TauE/SafE KQ251_RS15835 PF01509 TruB family pseudouridylate synthase (N terminal domain) KQ251_RS15835 PF16198 tRNA pseudouridylate synthase B C-terminal domain KQ251_RS15835 PF09157 Pseudouridine synthase II TruB, C-terminal KQ251_RS15840 PF03280 Proteobacterial lipase chaperone protein KQ251_RS15845 PF00561 alpha/beta hydrolase fold KQ251_RS15850 PF01245 Ribosomal protein L19 KQ251_RS15855 PF01746 tRNA (Guanine-1)-methyltransferase KQ251_RS15860 PF05239 PRC-barrel domain KQ251_RS15860 PF01782 RimM N-terminal domain KQ251_RS15865 PF00886 Ribosomal protein S16 KQ251_RS15905 PF02401 LytB protein KQ251_RS15910 PF00625 Guanylate kinase KQ251_RS15915 PF01192 RNA polymerase Rpb6 KQ251_RS15925 PF13291 ACT domain KQ251_RS15925 PF04607 Region found in RelA / SpoT proteins KQ251_RS15925 PF02824 TGS domain KQ251_RS15930 PF01042 Endoribonuclease L-PSP KQ251_RS15935 PF04324 BFD-like [2Fe-2S] binding domain KQ251_RS15940 PF00210 Ferritin-like domain KQ251_RS15945 PF11846 Virulence factor membrane-bound polymerase, C-terminal KQ251_RS15945 PF04932 O-Antigen ligase KQ251_RS15945 PF15864 Protein glycosylation ligase KQ251_RS15955 PF07963 Prokaryotic N-terminal methylation motif KQ251_RS15955 PF00114 Pilin (bacterial filament) KQ251_RS15965 PF04536 TPM domain KQ251_RS15970 PF04011 LemA family KQ251_RS15980 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KQ251_RS15980 PF07992 Pyridine nucleotide-disulphide oxidoreductase KQ251_RS15985 PF00310 Glutamine amidotransferases class-II KQ251_RS15985 PF04898 Glutamate synthase central domain KQ251_RS15985 PF01493 GXGXG motif KQ251_RS15985 PF01645 Conserved region in glutamate synthase KQ251_RS15995 PF01761 3-dehydroquinate synthase KQ251_RS16000 PF01202 Shikimate kinase KQ251_RS16005 PF03958 Bacterial type II/III secretion system short domain KQ251_RS16005 PF07660 Secretin and TonB N terminus short domain KQ251_RS16005 PF11741 AMIN domain KQ251_RS16005 PF00263 Bacterial type II and III secretion system protein KQ251_RS16015 PF04350 Pilus assembly protein, PilO KQ251_RS16020 PF05137 Fimbrial assembly protein (PilN) KQ251_RS16025 PF11104 Type IV pilus assembly protein PilM; KQ251_RS16030 PF17092 Penicillin-binding protein OB-like domain KQ251_RS16030 PF00912 Transglycosylase KQ251_RS16030 PF00905 Penicillin binding protein transpeptidase domain KQ251_RS16035 PF13847 Methyltransferase domain KQ251_RS16045 PF00953 Glycosyl transferase family 4 KQ251_RS16050 PF08245 Mur ligase middle domain KQ251_RS16050 PF02875 Mur ligase family, glutamate ligase domain KQ251_RS16050 PF01225 Mur ligase family, catalytic domain KQ251_RS16055 PF01225 Mur ligase family, catalytic domain KQ251_RS16055 PF02875 Mur ligase family, glutamate ligase domain KQ251_RS16055 PF08245 Mur ligase middle domain KQ251_RS16060 PF03717 Penicillin-binding Protein dimerisation domain KQ251_RS16060 PF00905 Penicillin binding protein transpeptidase domain KQ251_RS16070 PF01795 MraW methylase family KQ251_RS16085 PF00749 tRNA synthetases class I (E and Q), catalytic domain KQ251_RS16100 PF00324 Amino acid permease KQ251_RS16130 PF01545 Cation efflux family KQ251_RS16135 PF00873 AcrB/AcrD/AcrF family KQ251_RS16140 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KQ251_RS16140 PF00529 HlyD membrane-fusion protein of T1SS KQ251_RS16165 PF12848 ABC transporter KQ251_RS16165 PF00005 ABC transporter KQ251_RS16170 PF01053 Cys/Met metabolism PLP-dependent enzyme KQ251_RS16175 PF00106 short chain dehydrogenase KQ251_RS16180 PF01740 STAS domain KQ251_RS16180 PF00916 Sulfate permease family KQ251_RS16185 PF17674 HHH domain KQ251_RS16185 PF00575 S1 RNA binding domain KQ251_RS16185 PF09371 Tex-like protein N-terminal domain KQ251_RS16185 PF16921 Tex protein YqgF-like domain KQ251_RS16190 PF00072 Response regulator receiver domain KQ251_RS16190 PF00486 Transcriptional regulatory protein, C terminal KQ251_RS16195 PF00512 His Kinase A (phospho-acceptor) domain KQ251_RS16195 PF00672 HAMP domain KQ251_RS16195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ251_RS16205 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain KQ251_RS16205 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain KQ251_RS16210 PF00583 Acetyltransferase (GNAT) family KQ251_RS16230 PF00475 Imidazoleglycerol-phosphate dehydratase KQ251_RS16235 PF00117 Glutamine amidotransferase class-I KQ251_RS16250 PF00977 Histidine biosynthesis protein KQ251_RS16275 PF01636 Phosphotransferase enzyme family KQ251_RS16280 PF00977 Histidine biosynthesis protein KQ251_RS16295 PF00230 Major intrinsic protein KQ251_RS16320 PF02705 K+ potassium transporter KQ251_RS16330 PF13356 Arm DNA-binding domain KQ251_RS16330 PF00589 Phage integrase family KQ251_RS16365 PF00772 DnaB-like helicase N terminal domain KQ251_RS16365 PF03796 DnaB-like helicase C terminal domain KQ251_RS16435 PF13005 zinc-finger binding domain of transposase IS66 KQ251_RS16435 PF13007 Transposase C of IS166 homeodomain KQ251_RS16435 PF13817 IS66 C-terminal element KQ251_RS16435 PF03050 Transposase IS66 family KQ251_RS16445 PF13676 TIR domain KQ251_RS16460 PF13676 TIR domain KQ251_RS16470 PF13005 zinc-finger binding domain of transposase IS66 KQ251_RS16470 PF13007 Transposase C of IS166 homeodomain KQ251_RS16470 PF13817 IS66 C-terminal element KQ251_RS16470 PF03050 Transposase IS66 family KQ251_RS16505 PF02525 Flavodoxin-like fold KQ251_RS16510 PF01638 HxlR-like helix-turn-helix KQ251_RS16550 PF12833 Helix-turn-helix domain KQ251_RS16550 PF02311 AraC-like ligand binding domain KQ251_RS16555 PF00248 Aldo/keto reductase family KQ251_RS16575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_RS16575 PF03466 LysR substrate binding domain KQ251_RS16580 PF07690 Major Facilitator Superfamily KQ251_RS16605 PF01593 Flavin containing amine oxidoreductase KQ251_RS16610 PF02678 Pirin KQ251_RS16610 PF05726 Pirin C-terminal cupin domain KQ251_RS16615 PF00857 Isochorismatase family KQ251_RS16620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_RS16625 PF00171 Aldehyde dehydrogenase family KQ251_RS16630 PF00202 Aminotransferase class-III KQ251_RS16635 PF00392 Bacterial regulatory proteins, gntR family KQ251_RS16635 PF00155 Aminotransferase class I and II KQ251_RS16640 PF00324 Amino acid permease KQ251_RS16650 PF03591 AzlC protein KQ251_RS16660 PF00436 Single-strand binding protein family KQ251_RS16665 PF07690 Major Facilitator Superfamily KQ251_RS16675 PF02581 Thiamine monophosphate synthase KQ251_RS16675 PF03070 TENA/THI-4/PQQC family KQ251_RS16675 PF08543 Phosphomethylpyrimidine kinase KQ251_RS16680 PF06942 GlpM protein KQ251_RS16690 PF00107 Zinc-binding dehydrogenase KQ251_RS16690 PF08240 Alcohol dehydrogenase GroES-like domain KQ251_RS16695 PF00440 Bacterial regulatory proteins, tetR family KQ251_RS16695 PF16925 Tetracyclin repressor-like, C-terminal domain KQ251_RS16700 PF00005 ABC transporter KQ251_RS16700 PF17760 UvrA interaction domain KQ251_RS16700 PF17755 UvrA DNA-binding domain KQ251_RS16705 PF00990 Diguanylate cyclase, GGDEF domain KQ251_RS16715 PF02028 BCCT, betaine/carnitine/choline family transporter KQ251_RS16725 PF00474 Sodium:solute symporter family KQ251_RS16730 PF04341 Protein of unknown function, DUF485 KQ251_RS16735 PF00512 His Kinase A (phospho-acceptor) domain KQ251_RS16735 PF01627 Hpt domain KQ251_RS16735 PF00072 Response regulator receiver domain KQ251_RS16735 PF00672 HAMP domain KQ251_RS16735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ251_RS16745 PF00072 Response regulator receiver domain KQ251_RS16745 PF00196 Bacterial regulatory proteins, luxR family KQ251_RS16750 PF03358 NADPH-dependent FMN reductase KQ251_RS16755 PF00296 Luciferase-like monooxygenase KQ251_RS16760 PF01037 Lrp/AsnC ligand binding domain KQ251_RS16765 PF00857 Isochorismatase family KQ251_RS16770 PF16177 Acetyl-coenzyme A synthetase N-terminus KQ251_RS16770 PF00501 AMP-binding enzyme KQ251_RS16770 PF13193 AMP-binding enzyme C-terminal domain KQ251_RS16780 PF00924 Mechanosensitive ion channel KQ251_RS16785 PF04452 RNA methyltransferase KQ251_RS16790 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) KQ251_RS16795 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KQ251_RS16820 PF01368 DHH family KQ251_RS16820 PF02272 DHHA1 domain KQ251_RS16820 PF17768 RecJ OB domain KQ251_RS16825 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region KQ251_RS16825 PF01243 Pyridoxamine 5'-phosphate oxidase KQ251_RS16830 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KQ251_RS16830 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KQ251_RS16830 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KQ251_RS16830 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KQ251_RS16835 PF00571 CBS domain KQ251_RS16835 PF00478 IMP dehydrogenase / GMP reductase domain KQ251_RS16840 PF03692 Putative zinc- or iron-chelating domain KQ251_RS16845 PF01613 Flavin reductase like domain KQ251_RS16845 PF00258 Flavodoxin KQ251_RS16850 PF07715 TonB-dependent Receptor Plug Domain KQ251_RS16850 PF00593 TonB dependent receptor KQ251_RS16855 PF01169 Uncharacterized protein family UPF0016 KQ251_RS16865 PF00364 Biotin-requiring enzyme KQ251_RS16865 PF02817 e3 binding domain KQ251_RS16865 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KQ251_RS16870 PF17831 Pyruvate dehydrogenase E1 component middle domain KQ251_RS16870 PF00456 Transketolase, thiamine diphosphate binding domain KQ251_RS16875 PF01551 Peptidase family M23 KQ251_RS16885 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase KQ251_RS16890 PF12327 FtsZ family, C-terminal domain KQ251_RS16890 PF00091 Tubulin/FtsZ family, GTPase domain KQ251_RS16895 PF02491 SHS2 domain inserted in FTSA KQ251_RS16900 PF03799 Cell division protein FtsQ KQ251_RS16900 PF08478 POTRA domain, FtsQ-type KQ251_RS16905 PF01820 D-ala D-ala ligase N-terminus KQ251_RS16905 PF07478 D-ala D-ala ligase C-terminus KQ251_RS16910 PF01225 Mur ligase family, catalytic domain KQ251_RS16910 PF08245 Mur ligase middle domain KQ251_RS16910 PF02875 Mur ligase family, glutamate ligase domain KQ251_RS16915 PF03033 Glycosyltransferase family 28 N-terminal domain KQ251_RS16915 PF04101 Glycosyltransferase family 28 C-terminal domain KQ251_RS16920 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain KQ251_RS16920 PF02951 Prokaryotic glutathione synthetase, N-terminal domain KQ251_RS16930 PF07715 TonB-dependent Receptor Plug Domain KQ251_RS16930 PF00593 TonB dependent receptor KQ251_RS16935 PF00156 Phosphoribosyl transferase domain KQ251_RS16940 PF03372 Endonuclease/Exonuclease/phosphatase family KQ251_RS16945 PF03960 ArsC family KQ251_RS16955 PF07859 alpha/beta hydrolase fold KQ251_RS16960 PF07694 5TMR of 5TMR-LYT KQ251_RS16960 PF00990 Diguanylate cyclase, GGDEF domain KQ251_RS16965 PF02683 Cytochrome C biogenesis protein transmembrane region KQ251_RS16965 PF11412 Disulphide bond corrector protein DsbC KQ251_RS16995 PF00576 HIUase/Transthyretin family KQ251_RS17000 PF00860 Permease family KQ251_RS17010 PF01494 FAD binding domain KQ251_RS17015 PF03561 Allantoicase repeat KQ251_RS17020 PF04115 Ureidoglycolate lyase KQ251_RS17025 PF00106 short chain dehydrogenase KQ251_RS17030 PF00204 DNA gyrase B KQ251_RS17030 PF01751 Toprim domain KQ251_RS17030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ251_RS17030 PF00986 DNA gyrase B subunit, carboxyl terminus KQ251_RS17035 PF05728 Uncharacterised protein family (UPF0227) KQ251_RS17075 PF13296 Putative type VI secretion system Rhs element Vgr KQ251_RS17075 PF04717 Type VI secretion system, phage-baseplate injector KQ251_RS17075 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) KQ251_RS17080 PF02600 Disulfide bond formation protein DsbB KQ251_RS17085 PF04262 Glutamate-cysteine ligase KQ251_RS17100 PF04286 Protein of unknown function (DUF445) KQ251_RS17105 PF00155 Aminotransferase class I and II KQ251_RS17110 PF01554 MatE KQ251_RS17115 PF00106 short chain dehydrogenase KQ251_RS17125 PF00072 Response regulator receiver domain KQ251_RS17125 PF00486 Transcriptional regulatory protein, C terminal KQ251_RS17130 PF11808 Phosphate regulon sensor protein PhoR KQ251_RS17130 PF00989 PAS fold KQ251_RS17130 PF00512 His Kinase A (phospho-acceptor) domain KQ251_RS17130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ251_RS17140 PF00665 Integrase core domain KQ251_RS17140 PF13936 Helix-turn-helix domain KQ251_RS17150 PF03069 Acetamidase/Formamidase family KQ251_RS17155 PF02666 Phosphatidylserine decarboxylase KQ251_RS17160 PF00581 Rhodanese-like domain KQ251_RS17165 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KQ251_RS17165 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain KQ251_RS17175 PF06628 Catalase-related immune-responsive KQ251_RS17175 PF00199 Catalase KQ251_RS17180 PF02580 D-Tyr-tRNA(Tyr) deacylase KQ251_RS17205 PF00925 GTP cyclohydrolase II KQ251_RS17205 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KQ251_RS17210 PF00885 6,7-dimethyl-8-ribityllumazine synthase KQ251_RS17215 PF01029 NusB family KQ251_RS17220 PF02769 AIR synthase related protein, C-terminal domain KQ251_RS17220 PF00586 AIR synthase related protein, N-terminal domain KQ251_RS17225 PF04608 Phosphatidylglycerophosphatase A KQ251_RS17230 PF12804 MobA-like NTP transferase domain KQ251_RS17230 PF14602 Hexapeptide repeat of succinyl-transferase KQ251_RS17230 PF00132 Bacterial transferase hexapeptide (six repeats) KQ251_RS17235 PF01380 SIS domain KQ251_RS17240 PF01177 Asp/Glu/Hydantoin racemase KQ251_RS17255 PF00491 Arginase family KQ251_RS17260 PF01979 Amidohydrolase family KQ251_RS17265 PF00324 Amino acid permease KQ251_RS17270 PF00221 Aromatic amino acid lyase KQ251_RS17275 PF17391 Urocanase N-terminal domain KQ251_RS17275 PF01175 Urocanase Rossmann-like domain KQ251_RS17275 PF17392 Urocanase C-terminal domain KQ251_RS17280 PF05962 HutD KQ251_RS17285 PF07702 UTRA domain KQ251_RS17285 PF00392 Bacterial regulatory proteins, gntR family KQ251_RS17295 PF02492 CobW/HypB/UreG, nucleotide-binding domain KQ251_RS17295 PF07683 Cobalamin synthesis protein cobW C-terminal domain KQ251_RS17305 PF00324 Amino acid permease KQ251_RS17315 PF14497 Glutathione S-transferase, C-terminal domain KQ251_RS17315 PF02798 Glutathione S-transferase, N-terminal domain KQ251_RS17320 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KQ251_RS17330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KQ251_RS17335 PF04463 Protein of unknown function (DUF523) KQ251_RS17340 PF01554 MatE KQ251_RS17345 PF01758 Sodium Bile acid symporter family KQ251_RS17350 PF00857 Isochorismatase family KQ251_RS17355 PF00701 Dihydrodipicolinate synthetase family KQ251_RS17365 PF01259 SAICAR synthetase KQ251_RS17375 PF01226 Formate/nitrite transporter KQ251_RS17380 PF00004 ATPase family associated with various cellular activities (AAA) KQ251_RS17380 PF16193 AAA C-terminal domain KQ251_RS17380 PF12002 MgsA AAA+ ATPase C terminal KQ251_RS17390 PF03692 Putative zinc- or iron-chelating domain KQ251_RS17395 PF07043 Protein of unknown function (DUF1328) KQ251_RS17410 PF10576 Iron-sulfur binding domain of endonuclease III KQ251_RS17410 PF00633 Helix-hairpin-helix motif KQ251_RS17410 PF00730 HhH-GPD superfamily base excision DNA repair protein KQ251_RS17410 PF14815 NUDIX domain KQ251_RS17425 PF03352 Methyladenine glycosylase KQ251_RS17430 PF00107 Zinc-binding dehydrogenase KQ251_RS17430 PF08240 Alcohol dehydrogenase GroES-like domain KQ251_RS17435 PF00155 Aminotransferase class I and II KQ251_RS17435 PF00392 Bacterial regulatory proteins, gntR family KQ251_RS17450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_RS17450 PF03466 LysR substrate binding domain KQ251_RS17455 PF00248 Aldo/keto reductase family KQ251_RS17460 PF07690 Major Facilitator Superfamily KQ251_RS17470 PF05173 Dihydrodipicolinate reductase, C-terminus KQ251_RS17470 PF01113 Dihydrodipicolinate reductase, N-terminus KQ251_RS17480 PF00684 DnaJ central domain KQ251_RS17480 PF00226 DnaJ domain KQ251_RS17480 PF01556 DnaJ C terminal domain KQ251_RS17490 PF00873 AcrB/AcrD/AcrF family KQ251_RS17495 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KQ251_RS17500 PF00440 Bacterial regulatory proteins, tetR family KQ251_RS17500 PF08361 MAATS-type transcriptional repressor, C-terminal region KQ251_RS17505 PF00311 Phosphoenolpyruvate carboxylase KQ251_RS17510 PF00860 Permease family KQ251_RS17515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_RS17515 PF03466 LysR substrate binding domain KQ251_RS17530 PF00920 Dehydratase family KQ251_RS17535 PF00551 Formyl transferase KQ251_RS17535 PF02911 Formyl transferase, C-terminal domain KQ251_RS17540 PF01029 NusB family KQ251_RS17540 PF01189 16S rRNA methyltransferase RsmB/F KQ251_RS17550 PF00209 Sodium:neurotransmitter symporter family KQ251_RS17595 PF00579 tRNA synthetases class I (W and Y) KQ251_RS17600 PF03702 Anhydro-N-acetylmuramic acid kinase KQ251_RS17605 PF00561 alpha/beta hydrolase fold KQ251_RS17610 PF01521 Iron-sulphur cluster biosynthesis KQ251_RS17630 PF00005 ABC transporter KQ251_RS17630 PF12848 ABC transporter KQ251_RS17635 PF09335 SNARE associated Golgi protein KQ251_RS17645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ251_RS17645 PF01751 Toprim domain KQ251_RS17645 PF00986 DNA gyrase B subunit, carboxyl terminus KQ251_RS17645 PF00204 DNA gyrase B KQ251_RS17645 PF18053 DNA gyrase B subunit insert domain KQ251_RS17650 PF02463 RecF/RecN/SMC N terminal domain KQ251_RS17655 PF00712 DNA polymerase III beta subunit, N-terminal domain KQ251_RS17655 PF02767 DNA polymerase III beta subunit, central domain KQ251_RS17655 PF02768 DNA polymerase III beta subunit, C-terminal domain KQ251_RS17660 PF00308 Bacterial dnaA protein KQ251_RS17660 PF08299 Bacterial dnaA protein helix-turn-helix KQ251_RS17660 PF11638 DnaA N-terminal domain KQ251_RS17665 PF00468 Ribosomal protein L34 KQ251_RS17670 PF00825 Ribonuclease P KQ251_RS17675 PF01809 Putative membrane protein insertion efficiency factor KQ251_RS17680 PF14849 YidC periplasmic domain KQ251_RS17680 PF02096 60Kd inner membrane protein KQ251_RS17685 PF01926 50S ribosome-binding GTPase KQ251_RS17685 PF12631 MnmE helical domain KQ251_RS17685 PF10396 GTP-binding protein TrmE N-terminus KQ251_RS17690 PF02583 Metal-sensitive transcriptional repressor KQ251_RS17695 PF01545 Cation efflux family KQ251_RS17695 PF16916 Dimerisation domain of Zinc Transporter KQ251_RS17700 PF10411 Disulfide bond isomerase protein N-terminus KQ251_RS17700 PF13098 Thioredoxin-like domain KQ251_RS17710 PF00156 Phosphoribosyl transferase domain KQ251_RS17715 PF01979 Amidohydrolase family KQ251_RS17720 PF00355 Rieske [2Fe-2S] domain KQ251_RS17725 PF03738 Glutathionylspermidine synthase preATP-grasp KQ251_RS17740 PF03741 Integral membrane protein TerC family KQ251_RS17745 PF01569 PAP2 superfamily KQ251_RS17755 PF01225 Mur ligase family, catalytic domain KQ251_RS17755 PF02875 Mur ligase family, glutamate ligase domain KQ251_RS17755 PF08245 Mur ligase middle domain KQ251_RS17765 PF00731 AIR carboxylase KQ251_RS17770 PF02222 ATP-grasp domain KQ251_RS17770 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain KQ251_RS17775 PF13406 Transglycosylase SLT domain KQ251_RS17795 PF00012 Hsp70 protein KQ251_RS17800 PF01025 GrpE KQ251_RS17805 PF03466 LysR substrate binding domain KQ251_RS17805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KQ251_RS17825 PF07859 alpha/beta hydrolase fold KQ251_RS17830 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KQ251_RS17870 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KQ251_RS17875 PF01252 Signal peptidase (SPase) II KQ251_RS17880 PF08264 Anticodon-binding domain of tRNA KQ251_RS17880 PF00133 tRNA synthetases class I (I, L, M and V) KQ251_RS17880 PF06827 Zinc finger found in FPG and IleRS KQ251_RS17885 PF01687 Riboflavin kinase KQ251_RS17885 PF06574 FAD synthetase KQ251_RS17895 PF01048 Phosphorylase superfamily KQ251_RS17900 PF08362 YcdC-like protein, C-terminal region KQ251_RS17900 PF00440 Bacterial regulatory proteins, tetR family KQ251_RS17905 PF00005 ABC transporter KQ251_RS17910 PF00528 Binding-protein-dependent transport system inner membrane component KQ251_RS17915 PF00296 Luciferase-like monooxygenase KQ251_RS17920 PF09084 NMT1/THI5 like KQ251_RS17925 PF09084 NMT1/THI5 like KQ251_RS17930 PF00583 Acetyltransferase (GNAT) family KQ251_RS17930 PF00696 Amino acid kinase family KQ251_RS17945 PF00106 short chain dehydrogenase KQ251_RS17950 PF13419 Haloacid dehalogenase-like hydrolase KQ251_RS17960 PF01323 DSBA-like thioredoxin domain KQ251_RS17965 PF00440 Bacterial regulatory proteins, tetR family KQ251_RS17970 PF00440 Bacterial regulatory proteins, tetR family KQ251_RS17975 PF00175 Oxidoreductase NAD-binding domain KQ251_RS17980 PF00487 Fatty acid desaturase KQ251_RS17985 PF01138 3' exoribonuclease family, domain 1 KQ251_RS17985 PF03725 3' exoribonuclease family, domain 2 KQ251_RS17995 PF04185 Phosphoesterase family KQ251_RS17995 PF05506 Domain of unknown function (DUF756) KQ251_RS18005 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain KQ251_RS18005 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain KQ251_RS18010 PF01510 N-acetylmuramoyl-L-alanine amidase KQ251_RS18015 PF03023 Lipid II flippase MurJ KQ251_RS18020 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KQ251_RS18020 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KQ251_RS18025 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KQ251_RS18025 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KQ251_RS18030 PF13614 AAA domain KQ251_RS18030 PF13807 G-rich domain on putative tyrosine kinase KQ251_RS18030 PF02706 Chain length determinant protein KQ251_RS18035 PF01451 Low molecular weight phosphotyrosine protein phosphatase KQ251_RS18040 PF02563 Polysaccharide biosynthesis/export protein KQ251_RS18040 PF10531 SLBB domain KQ251_RS18040 PF18412 Outer-membrane lipoprotein Wza C-terminal domain KQ251_RS18045 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KQ251_RS18045 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KQ251_RS18045 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KQ251_RS18050 PF01370 NAD dependent epimerase/dehydratase family KQ251_RS18065 PF13477 Glycosyl transferase 4-like KQ251_RS18065 PF00534 Glycosyl transferases group 1 KQ251_RS18070 PF02397 Bacterial sugar transferase KQ251_RS18075 PF00132 Bacterial transferase hexapeptide (six repeats) KQ251_RS18075 PF14602 Hexapeptide repeat of succinyl-transferase KQ251_RS18075 PF17836 PglD N-terminal domain KQ251_RS18080 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KQ251_RS18085 PF02719 Polysaccharide biosynthesis protein KQ251_RS18090 PF00483 Nucleotidyl transferase KQ251_RS18095 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KQ251_RS18095 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KQ251_RS18095 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KQ251_RS18100 PF00342 Phosphoglucose isomerase KQ251_RS18105 PF16363 GDP-mannose 4,6 dehydratase KQ251_RS18110 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KQ251_RS18110 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KQ251_RS18110 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KQ251_RS18110 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KQ251_RS18115 PF02652 L-lactate permease KQ251_RS18120 PF07729 FCD domain KQ251_RS18120 PF00392 Bacterial regulatory proteins, gntR family KQ251_RS18125 PF01070 FMN-dependent dehydrogenase KQ251_RS18130 PF01565 FAD binding domain KQ251_RS18130 PF09330 D-lactate dehydrogenase, membrane binding KQ251_RS18135 PF00155 Aminotransferase class I and II KQ251_RS18145 PF07729 FCD domain KQ251_RS18145 PF00392 Bacterial regulatory proteins, gntR family KQ251_RS18155 PF00285 Citrate synthase, C-terminal domain KQ251_RS18160 PF00330 Aconitase family (aconitate hydratase) KQ251_RS18160 PF00694 Aconitase C-terminal domain KQ251_RS18180 PF00293 NUDIX domain KQ251_RS18190 PF02801 Beta-ketoacyl synthase, C-terminal domain KQ251_RS18190 PF00109 Beta-ketoacyl synthase, N-terminal domain KQ251_RS18210 PF00849 RNA pseudouridylate synthase KQ251_RS18225 PF00593 TonB dependent receptor KQ251_RS18225 PF07715 TonB-dependent Receptor Plug Domain KQ251_RS18235 PF01037 Lrp/AsnC ligand binding domain KQ251_RS18240 PF01266 FAD dependent oxidoreductase KQ251_RS18245 PF00842 Alanine racemase, C-terminal domain KQ251_RS18245 PF01168 Alanine racemase, N-terminal domain KQ251_RS18250 PF01042 Endoribonuclease L-PSP KQ251_RS18255 PF00324 Amino acid permease KQ251_RS18260 PF00324 Amino acid permease KQ251_RS18270 PF00171 Aldehyde dehydrogenase family KQ251_RS18275 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KQ251_RS18275 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KQ251_RS18280 PF13193 AMP-binding enzyme C-terminal domain KQ251_RS18280 PF00501 AMP-binding enzyme KQ251_RS18285 PF02770 Acyl-CoA dehydrogenase, middle domain KQ251_RS18285 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ251_RS18285 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ251_RS18290 PF00378 Enoyl-CoA hydratase/isomerase KQ251_RS18295 PF00378 Enoyl-CoA hydratase/isomerase KQ251_RS18300 PF00083 Sugar (and other) transporter KQ251_RS18300 PF07690 Major Facilitator Superfamily KQ251_RS18305 PF00765 Autoinducer synthase KQ251_RS18315 PF13737 Transposase DDE domain KQ251_RS18320 PF00196 Bacterial regulatory proteins, luxR family KQ251_RS18320 PF03472 Autoinducer binding domain KQ251_RS18325 PF00501 AMP-binding enzyme KQ251_RS18330 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KQ251_RS18330 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KQ251_RS18330 PF02770 Acyl-CoA dehydrogenase, middle domain KQ251_RS18335 PF00109 Beta-ketoacyl synthase, N-terminal domain KQ251_RS18335 PF00975 Thioesterase domain KQ251_RS18335 PF14765 Polyketide synthase dehydratase KQ251_RS18335 PF08242 Methyltransferase domain KQ251_RS18335 PF02801 Beta-ketoacyl synthase, C-terminal domain KQ251_RS18335 PF00550 Phosphopantetheine attachment site KQ251_RS18335 PF16197 Ketoacyl-synthetase C-terminal extension KQ251_RS18340 PF00501 AMP-binding enzyme KQ251_RS18340 PF13193 AMP-binding enzyme C-terminal domain KQ251_RS18340 PF00550 Phosphopantetheine attachment site KQ251_RS18340 PF00668 Condensation domain KQ251_RS18340 PF00975 Thioesterase domain KQ251_RS18355 PF16363 GDP-mannose 4,6 dehydratase KQ251_RS18360 PF01648 4'-phosphopantetheinyl transferase superfamily KQ251_RS18370 PF01722 BolA-like protein KQ251_RS18380 PF13614 AAA domain KQ251_RS18395 PF09335 SNARE associated Golgi protein KQ251_RS18400 PF07681 DoxX KQ251_RS18405 PF04286 Protein of unknown function (DUF445) KQ251_RS18410 PF02540 NAD synthase KQ251_RS18410 PF00958 GMP synthase C terminal domain KQ251_RS18410 PF00117 Glutamine amidotransferase class-I KQ251_RS18415 PF01909 Nucleotidyltransferase domain KQ251_RS18415 PF13427 Domain of unknown function (DUF4111) KQ251_RS18420 PF03551 Transcriptional regulator PadR-like family KQ251_RS18430 PF02678 Pirin KQ251_RS18430 PF05726 Pirin C-terminal cupin domain KQ251_RS18450 PF00750 tRNA synthetases class I (R) KQ251_RS18450 PF03485 Arginyl tRNA synthetase N terminal domain KQ251_RS18450 PF05746 DALR anticodon binding domain KQ251_RS18455 PF00390 Malic enzyme, N-terminal domain KQ251_RS18455 PF03949 Malic enzyme, NAD binding domain KQ251_RS18460 PF04261 Dyp-type peroxidase family KQ251_RS18465 PF01810 LysE type translocator KQ251_RS18470 PF00950 ABC 3 transport family KQ251_RS18475 PF00005 ABC transporter KQ251_RS18495 PF00119 ATP synthase A chain KQ251_RS18500 PF00137 ATP synthase subunit C KQ251_RS18505 PF00430 ATP synthase B/B' CF(0) KQ251_RS18510 PF00213 ATP synthase delta (OSCP) subunit KQ251_RS18515 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KQ251_RS18515 PF02874 ATP synthase alpha/beta family, beta-barrel domain KQ251_RS18515 PF00306 ATP synthase alpha/beta chain, C terminal domain KQ251_RS18520 PF00231 ATP synthase KQ251_RS18525 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KQ251_RS18525 PF02874 ATP synthase alpha/beta family, beta-barrel domain KQ251_RS18530 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain KQ251_RS18540 PF00255 Glutathione peroxidase KQ251_RS18550 PF07690 Major Facilitator Superfamily KQ251_RS18555 PF00440 Bacterial regulatory proteins, tetR family KQ251_RS18560 PF00892 EamA-like transporter family KQ251_RS18565 PF01300 Telomere recombination KQ251_RS18570 PF02481 DNA recombination-mediator protein A KQ251_RS18570 PF17782 DprA winged helix domain KQ251_RS18580 PF01327 Polypeptide deformylase KQ251_RS18590 PF00593 TonB dependent receptor KQ251_RS18590 PF07715 TonB-dependent Receptor Plug Domain KQ251_RS18640 PF00291 Pyridoxal-phosphate dependent enzyme KQ251_RS18650 PF03358 NADPH-dependent FMN reductase KQ251_RS18670 PF11842 Domain of unknown function (DUF3362) KQ251_RS18670 PF04055 Radical SAM superfamily KQ251_RS18670 PF08497 Radical SAM N-terminal KQ251_RS18690 PF00817 impB/mucB/samB family KQ251_RS18690 PF11799 impB/mucB/samB family C-terminal domain KQ251_RS18690 PF11798 IMS family HHH motif KQ251_RS18700 PF07690 Major Facilitator Superfamily KQ251_RS18705 PF03641 Possible lysine decarboxylase KQ251_RS18710 PF03741 Integral membrane protein TerC family KQ251_RS18710 PF03471 Transporter associated domain KQ251_RS18715 PF02810 SEC-C motif KQ251_RS18720 PF03458 UPF0126 domain KQ251_RS18725 PF07690 Major Facilitator Superfamily KQ251_RS18730 PF03989 DNA gyrase C-terminal domain, beta-propeller KQ251_RS18730 PF00521 DNA gyrase/topoisomerase IV, subunit A KQ251_RS18735 PF00501 AMP-binding enzyme KQ251_RS18735 PF13193 AMP-binding enzyme C-terminal domain KQ251_RS18750 PF00719 Inorganic pyrophosphatase KQ251_RS18755 PF03573 outer membrane porin, OprD family KQ251_RS18770 PF00701 Dihydrodipicolinate synthetase family KQ251_RS18780 PF00392 Bacterial regulatory proteins, gntR family KQ251_RS18780 PF00155 Aminotransferase class I and II KQ251_RS18795 PF00665 Integrase core domain KQ251_RS18815 PF00872 Transposase, Mutator family KQ251_RS18830 PF00582 Universal stress protein family KQ251_RS18835 PF01740 STAS domain KQ251_RS18835 PF00916 Sulfate permease family KQ251_RS18855 PF00543 Nitrogen regulatory protein P-II KQ251_RS18860 PF00909 Ammonium Transporter Family KQ251_RS18865 PF03477 ATP cone domain KQ251_RS18870 PF01872 RibD C-terminal domain KQ251_RS18870 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KQ251_RS18880 PF00677 Lumazine binding domain KQ251_RS18900 PF02789 Cytosol aminopeptidase family, N-terminal domain KQ251_RS18900 PF00883 Cytosol aminopeptidase family, catalytic domain KQ251_RS18910 PF03739 Lipopolysaccharide export system permease LptF/LptG KQ251_RS18915 PF06415 BPG-independent PGAM N-terminus (iPGM_N) KQ251_RS18915 PF01676 Metalloenzyme superfamily KQ251_RS18920 PF00595 PDZ domain KQ251_RS18920 PF03572 Peptidase family S41 KQ251_RS18925 PF02954 Bacterial regulatory protein, Fis family KQ251_RS18925 PF00072 Response regulator receiver domain KQ251_RS18925 PF00158 Sigma-54 interaction domain KQ251_RS18930 PF00512 His Kinase A (phospho-acceptor) domain KQ251_RS18930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ251_RS18935 PF00196 Bacterial regulatory proteins, luxR family KQ251_RS18935 PF00072 Response regulator receiver domain KQ251_RS18940 PF00768 D-alanyl-D-alanine carboxypeptidase KQ251_RS18945 PF00291 Pyridoxal-phosphate dependent enzyme KQ251_RS18950 PF01842 ACT domain KQ251_RS18950 PF03447 Homoserine dehydrogenase, NAD binding domain KQ251_RS18950 PF00742 Homoserine dehydrogenase KQ251_RS18955 PF13098 Thioredoxin-like domain KQ251_RS18955 PF10411 Disulfide bond isomerase protein N-terminus KQ251_RS18960 PF00589 Phage integrase family KQ251_RS18960 PF02899 Phage integrase, N-terminal SAM-like domain KQ251_RS18970 PF07664 Ferrous iron transport protein B C terminus KQ251_RS18970 PF02421 Ferrous iron transport protein B KQ251_RS18970 PF07670 Nucleoside recognition KQ251_RS18980 PF08245 Mur ligase middle domain KQ251_RS18980 PF02875 Mur ligase family, glutamate ligase domain KQ251_RS18985 PF01098 Cell cycle protein KQ251_RS18990 PF00749 tRNA synthetases class I (E and Q), catalytic domain KQ251_RS18995 PF01258 Prokaryotic dksA/traR C4-type zinc finger KQ251_RS19000 PF00149 Calcineurin-like phosphoesterase KQ251_RS19005 PF00293 NUDIX domain KQ251_RS19010 PF13667 ThiC-associated domain KQ251_RS19010 PF01964 Radical SAM ThiC family KQ251_RS19025 PF00892 EamA-like transporter family KQ251_RS19030 PF02321 Outer membrane efflux protein KQ251_RS19035 PF01895 PhoU domain KQ251_RS19040 PF04362 Bacterial Fe(2+) trafficking KQ251_RS19045 PF14698 Argininosuccinate lyase C-terminal KQ251_RS19045 PF00206 Lyase KQ251_RS19050 PF07694 5TMR of 5TMR-LYT KQ251_RS19050 PF06580 Histidine kinase KQ251_RS19050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KQ251_RS19055 PF04397 LytTr DNA-binding domain KQ251_RS19055 PF00072 Response regulator receiver domain KQ251_RS19060 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain KQ251_RS19060 PF03900 Porphobilinogen deaminase, C-terminal domain KQ251_RS19085 PF00816 H-NS histone family KQ251_RS19100 PF00263 Bacterial type II and III secretion system protein KQ251_RS19100 PF03958 Bacterial type II/III secretion system short domain KQ251_RS19105 PF12401 Protein of unknown function (DUF2662) KQ251_RS19105 PF00498 FHA domain KQ251_RS19110 PF13419 Haloacid dehalogenase-like hydrolase KQ251_RS19115 PF04715 Anthranilate synthase component I, N terminal region KQ251_RS19115 PF00425 chorismate binding enzyme KQ251_RS19140 PF00009 Elongation factor Tu GTP binding domain KQ251_RS19140 PF03144 Elongation factor Tu domain 2 KQ251_RS19140 PF03143 Elongation factor Tu C-terminal domain KQ251_RS19195 PF00565 Staphylococcal nuclease homologue KQ251_RS19200 PF00816 H-NS histone family KQ251_RS19245 PF00589 Phage integrase family KQ251_RS19245 PF02899 Phage integrase, N-terminal SAM-like domain KQ251_RS19250 PF13610 DDE domain KQ251_RS19275 PF00962 Adenosine/AMP deaminase KQ251_RS19285 PF03050 Transposase IS66 family KQ251_RS19285 PF13007 Transposase C of IS166 homeodomain KQ251_RS19285 PF13817 IS66 C-terminal element KQ251_RS19285 PF13005 zinc-finger binding domain of transposase IS66 KQ251_RS19325 PF13614 AAA domain KQ251_RS19330 PF17762 HTH domain found in ParB protein KQ251_RS19330 PF02195 ParB-like nuclease domain KQ251_RS19345 PF05816 Toxic anion resistance protein (TelA) KQ251_RS19365 PF00905 Penicillin binding protein transpeptidase domain KQ251_RS19375 PF13737 Transposase DDE domain KQ251_RS19470 PF01556 DnaJ C terminal domain KQ251_RS19470 PF00226 DnaJ domain KQ251_RS19470 PF00684 DnaJ central domain KQ251_RS19505 PF18272 single-stranded DNA binding TraI N-terminal subdomain KQ251_RS19505 PF08751 TrwC relaxase KQ251_RS19505 PF18340 DNA relaxase TraI 2B/2B-like domain KQ251_RS19505 PF07057 DNA helicase TraI KQ251_RS19545 PF02796 Helix-turn-helix domain of resolvase KQ251_RS19545 PF00239 Resolvase, N terminal domain KQ251_RS19560 PF01464 Transglycosylase SLT domain KQ251_RS19595 PF13098 Thioredoxin-like domain KQ251_RS19595 PF10411 Disulfide bond isomerase protein N-terminus KQ251_RS19630 PF06834 TraU protein KQ251_RS19640 PF06986 Type-1V conjugative transfer system mating pair stabilisation KQ251_RS19655 PF06122 Conjugative relaxosome accessory transposon protein KQ251_RS19680 PF00665 Integrase core domain KQ251_RS19700 PF00872 Transposase, Mutator family KQ251_RS19715 PF00582 Universal stress protein family KQ251_RS19720 PF01740 STAS domain KQ251_RS19720 PF00916 Sulfate permease family KQ251_RS19735 PF13438 Domain of unknown function (DUF4113) KQ251_RS19735 PF00817 impB/mucB/samB family KQ251_RS19735 PF11799 impB/mucB/samB family C-terminal domain KQ251_RS19735 PF11798 IMS family HHH motif KQ251_RS19745 PF13936 Helix-turn-helix domain KQ251_RS19745 PF00665 Integrase core domain KQ251_RS19765 PF01051 Initiator Replication protein KQ251_RS19790 PF07715 TonB-dependent Receptor Plug Domain KQ251_RS19790 PF00593 TonB dependent receptor KQ251_RS19810 PF05973 Phage derived protein Gp49-like (DUF891)