locus-tag class description FDE89_RS00010 PF10431 C-terminal, D2-small domain, of ClpB protein FDE89_RS00010 PF00004 ATPase family associated with various cellular activities (AAA) FDE89_RS00010 PF07724 AAA domain (Cdc48 subfamily) FDE89_RS00010 PF17871 AAA lid domain FDE89_RS00010 PF02861 Clp amino terminal domain, pathogenicity island component FDE89_RS00025 PF01170 Putative RNA methylase family UPF0020 FDE89_RS00025 PF10672 S-adenosylmethionine-dependent methyltransferase FDE89_RS00025 PF02926 THUMP domain FDE89_RS00035 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FDE89_RS00035 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FDE89_RS00040 PF01979 Amidohydrolase family FDE89_RS00045 PF00691 OmpA family FDE89_RS00045 PF13488 Glycine zipper FDE89_RS00055 PF00043 Glutathione S-transferase, C-terminal domain FDE89_RS00055 PF13417 Glutathione S-transferase, N-terminal domain FDE89_RS00060 PF02390 Putative methyltransferase FDE89_RS00070 PF02798 Glutathione S-transferase, N-terminal domain FDE89_RS00070 PF00043 Glutathione S-transferase, C-terminal domain FDE89_RS00080 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDE89_RS00080 PF13192 Thioredoxin domain FDE89_RS00100 PF10417 C-terminal domain of 1-Cys peroxiredoxin FDE89_RS00100 PF00578 AhpC/TSA family FDE89_RS00105 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold FDE89_RS00105 PF00271 Helicase conserved C-terminal domain FDE89_RS00105 PF04408 Helicase associated domain (HA2) FDE89_RS00105 PF00270 DEAD/DEAH box helicase FDE89_RS00105 PF11898 Domain of unknown function (DUF3418) FDE89_RS00110 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FDE89_RS00110 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FDE89_RS00120 PF07690 Major Facilitator Superfamily FDE89_RS00125 PF03594 Benzoate membrane transport protein FDE89_RS00130 PF00106 short chain dehydrogenase FDE89_RS00135 PF00970 Oxidoreductase FAD-binding domain FDE89_RS00135 PF00175 Oxidoreductase NAD-binding domain FDE89_RS00135 PF00111 2Fe-2S iron-sulfur cluster binding domain FDE89_RS00140 PF00866 Ring hydroxylating beta subunit FDE89_RS00145 PF00355 Rieske [2Fe-2S] domain FDE89_RS00145 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FDE89_RS00150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDE89_RS00150 PF03466 LysR substrate binding domain FDE89_RS00160 PF00403 Heavy-metal-associated domain FDE89_RS00165 PF09278 MerR, DNA binding FDE89_RS00165 PF00376 MerR family regulatory protein FDE89_RS00205 PF02601 Exonuclease VII, large subunit FDE89_RS00205 PF13742 OB-fold nucleic acid binding domain FDE89_RS00240 PF01810 LysE type translocator FDE89_RS00245 PF00313 'Cold-shock' DNA-binding domain FDE89_RS00255 PF14748 Pyrroline-5-carboxylate reductase dimerisation FDE89_RS00255 PF03807 NADP oxidoreductase coenzyme F420-dependent FDE89_RS00285 PF07690 Major Facilitator Superfamily FDE89_RS00290 PF01638 HxlR-like helix-turn-helix FDE89_RS00320 PF01406 tRNA synthetases class I (C) catalytic domain FDE89_RS00320 PF09190 DALR domain FDE89_RS00325 PF00571 CBS domain FDE89_RS00325 PF01380 SIS domain FDE89_RS00340 PF03968 OstA-like protein FDE89_RS00345 PF00005 ABC transporter FDE89_RS00345 PF12399 Branched-chain amino acid ATP-binding cassette transporter FDE89_RS00350 PF02321 Outer membrane efflux protein FDE89_RS00355 PF00005 ABC transporter FDE89_RS00355 PF00664 ABC transporter transmembrane region FDE89_RS00355 PF03412 Peptidase C39 family FDE89_RS00370 PF00132 Bacterial transferase hexapeptide (six repeats) FDE89_RS00380 PF01596 O-methyltransferase FDE89_RS00390 PF00037 4Fe-4S binding domain FDE89_RS00390 PF11953 Domain of unknown function (DUF3470) FDE89_RS00400 PF05190 MutS family domain IV FDE89_RS00400 PF00488 MutS domain V FDE89_RS00400 PF05192 MutS domain III FDE89_RS00400 PF05188 MutS domain II FDE89_RS00400 PF01624 MutS domain I FDE89_RS00405 PF01037 Lrp/AsnC ligand binding domain FDE89_RS00410 PF00892 EamA-like transporter family FDE89_RS00415 PF00990 Diguanylate cyclase, GGDEF domain FDE89_RS00415 PF00563 EAL domain FDE89_RS00415 PF03707 Bacterial signalling protein N terminal repeat FDE89_RS00420 PF03279 Bacterial lipid A biosynthesis acyltransferase FDE89_RS00435 PF07690 Major Facilitator Superfamily FDE89_RS00455 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FDE89_RS00455 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FDE89_RS00475 PF13419 Haloacid dehalogenase-like hydrolase FDE89_RS00490 PF04717 Type VI secretion system, phage-baseplate injector FDE89_RS00490 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) FDE89_RS00490 PF13296 Putative type VI secretion system Rhs element Vgr FDE89_RS00495 PF03527 RHS protein FDE89_RS00495 PF05593 RHS Repeat FDE89_RS00510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDE89_RS00510 PF03466 LysR substrate binding domain FDE89_RS00515 PF01566 Natural resistance-associated macrophage protein FDE89_RS00520 PF03746 LamB/YcsF family FDE89_RS00525 PF07286 Protein of unknown function (DUF1445) FDE89_RS00535 PF02785 Biotin carboxylase C-terminal domain FDE89_RS00535 PF00364 Biotin-requiring enzyme FDE89_RS00535 PF00289 Biotin carboxylase, N-terminal domain FDE89_RS00535 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FDE89_RS00540 PF00654 Voltage gated chloride channel FDE89_RS00565 PF00440 Bacterial regulatory proteins, tetR family FDE89_RS00590 PF00289 Biotin carboxylase, N-terminal domain FDE89_RS00590 PF02785 Biotin carboxylase C-terminal domain FDE89_RS00590 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FDE89_RS00595 PF02525 Flavodoxin-like fold FDE89_RS00615 PF01402 Ribbon-helix-helix protein, copG family FDE89_RS00615 PF08753 NikR C terminal nickel binding domain FDE89_RS00620 PF01425 Amidase FDE89_RS00625 PF00497 Bacterial extracellular solute-binding proteins, family 3 FDE89_RS00630 PF00005 ABC transporter FDE89_RS00660 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath FDE89_RS00700 PF06761 Intracellular multiplication and human macrophage-killing FDE89_RS00700 PF06744 Type VI secretion protein IcmF C-terminal FDE89_RS00700 PF14331 ImcF-related N-terminal domain FDE89_RS00710 PF00691 OmpA family FDE89_RS00710 PF01389 OmpA-like transmembrane domain FDE89_RS00720 PF17871 AAA lid domain FDE89_RS00720 PF10431 C-terminal, D2-small domain, of ClpB protein FDE89_RS00720 PF00004 ATPase family associated with various cellular activities (AAA) FDE89_RS00720 PF07724 AAA domain (Cdc48 subfamily) FDE89_RS00725 PF06812 ImpA, N-terminal, type VI secretion system FDE89_RS00730 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE FDE89_RS00750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDE89_RS00750 PF03466 LysR substrate binding domain FDE89_RS00760 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FDE89_RS00765 PF07690 Major Facilitator Superfamily FDE89_RS00780 PF02677 Epoxyqueuosine reductase QueH FDE89_RS00790 PF00376 MerR family regulatory protein FDE89_RS00790 PF09278 MerR, DNA binding FDE89_RS00805 PF00701 Dihydrodipicolinate synthetase family FDE89_RS00815 PF00392 Bacterial regulatory proteins, gntR family FDE89_RS00820 PF05544 Proline racemase FDE89_RS00825 PF01266 FAD dependent oxidoreductase FDE89_RS00835 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDE89_RS00835 PF04324 BFD-like [2Fe-2S] binding domain FDE89_RS00845 PF00083 Sugar (and other) transporter FDE89_RS00850 PF00171 Aldehyde dehydrogenase family FDE89_RS00855 PF13520 Amino acid permease FDE89_RS00860 PF03315 Serine dehydratase beta chain FDE89_RS00860 PF03313 Serine dehydratase alpha chain FDE89_RS00865 PF01575 MaoC like domain FDE89_RS00865 PF00171 Aldehyde dehydrogenase family FDE89_RS00870 PF05138 Phenylacetic acid catabolic protein FDE89_RS00875 PF06243 Phenylacetic acid degradation B FDE89_RS00880 PF05138 Phenylacetic acid catabolic protein FDE89_RS00885 PF01883 Iron-sulfur cluster assembly protein FDE89_RS00890 PF00175 Oxidoreductase NAD-binding domain FDE89_RS00890 PF00970 Oxidoreductase FAD-binding domain FDE89_RS00890 PF00111 2Fe-2S iron-sulfur cluster binding domain FDE89_RS00895 PF00378 Enoyl-CoA hydratase/isomerase FDE89_RS00900 PF00378 Enoyl-CoA hydratase/isomerase FDE89_RS00905 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FDE89_RS00905 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FDE89_RS00905 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain FDE89_RS00910 PF02803 Thiolase, C-terminal domain FDE89_RS00910 PF00108 Thiolase, N-terminal domain FDE89_RS00915 PF14535 AMP-binding enzyme C-terminal domain FDE89_RS00915 PF00501 AMP-binding enzyme FDE89_RS00920 PF08223 PaaX-like protein C-terminal domain FDE89_RS00920 PF07848 PaaX-like protein FDE89_RS00925 PF00132 Bacterial transferase hexapeptide (six repeats) FDE89_RS00930 PF03061 Thioesterase superfamily FDE89_RS00970 PF00199 Catalase FDE89_RS00975 PF01292 Prokaryotic cytochrome b561 FDE89_RS00995 PF12697 Alpha/beta hydrolase family FDE89_RS01000 PF01613 Flavin reductase like domain FDE89_RS01005 PF00296 Luciferase-like monooxygenase FDE89_RS01010 PF00171 Aldehyde dehydrogenase family FDE89_RS01020 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin FDE89_RS01030 PF00171 Aldehyde dehydrogenase family FDE89_RS01035 PF02627 Carboxymuconolactone decarboxylase family FDE89_RS01040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDE89_RS01040 PF03466 LysR substrate binding domain FDE89_RS01045 PF02525 Flavodoxin-like fold FDE89_RS01050 PF01614 Bacterial transcriptional regulator FDE89_RS01050 PF09339 IclR helix-turn-helix domain FDE89_RS01060 PF00392 Bacterial regulatory proteins, gntR family FDE89_RS01060 PF07702 UTRA domain FDE89_RS01070 PF08402 TOBE domain FDE89_RS01070 PF00005 ABC transporter FDE89_RS01075 PF00528 Binding-protein-dependent transport system inner membrane component FDE89_RS01080 PF01266 FAD dependent oxidoreductase FDE89_RS01085 PF00266 Aminotransferase class-V FDE89_RS01090 PF13419 Haloacid dehalogenase-like hydrolase FDE89_RS01095 PF07690 Major Facilitator Superfamily FDE89_RS01100 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDE89_RS01100 PF02770 Acyl-CoA dehydrogenase, middle domain FDE89_RS01100 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDE89_RS01105 PF02515 CoA-transferase family III FDE89_RS01110 PF09339 IclR helix-turn-helix domain FDE89_RS01115 PF00378 Enoyl-CoA hydratase/isomerase FDE89_RS01120 PF03060 Nitronate monooxygenase FDE89_RS01125 PF07690 Major Facilitator Superfamily FDE89_RS01130 PF09339 IclR helix-turn-helix domain FDE89_RS01135 PF00108 Thiolase, N-terminal domain FDE89_RS01135 PF02803 Thiolase, C-terminal domain FDE89_RS01140 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain FDE89_RS01140 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FDE89_RS01140 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FDE89_RS01150 PF00378 Enoyl-CoA hydratase/isomerase FDE89_RS01155 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDE89_RS01155 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDE89_RS01155 PF02770 Acyl-CoA dehydrogenase, middle domain FDE89_RS01160 PF07690 Major Facilitator Superfamily FDE89_RS01165 PF01144 Coenzyme A transferase FDE89_RS01170 PF01144 Coenzyme A transferase FDE89_RS01180 PF07690 Major Facilitator Superfamily FDE89_RS01190 PF02770 Acyl-CoA dehydrogenase, middle domain FDE89_RS01190 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDE89_RS01190 PF12806 Acetyl-CoA dehydrogenase C-terminal like FDE89_RS01190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDE89_RS01205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDE89_RS01205 PF03466 LysR substrate binding domain FDE89_RS01210 PF00682 HMGL-like FDE89_RS01215 PF18140 Propionyl-coenzyme A carboxylase BT domain FDE89_RS01215 PF00364 Biotin-requiring enzyme FDE89_RS01215 PF00289 Biotin carboxylase, N-terminal domain FDE89_RS01215 PF02785 Biotin carboxylase C-terminal domain FDE89_RS01215 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FDE89_RS01220 PF00378 Enoyl-CoA hydratase/isomerase FDE89_RS01225 PF01039 Carboxyl transferase domain FDE89_RS01230 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDE89_RS01230 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDE89_RS01230 PF02770 Acyl-CoA dehydrogenase, middle domain FDE89_RS01235 PF00440 Bacterial regulatory proteins, tetR family FDE89_RS01240 PF00501 AMP-binding enzyme FDE89_RS01240 PF13193 AMP-binding enzyme C-terminal domain FDE89_RS01260 PF03466 LysR substrate binding domain FDE89_RS01260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDE89_RS01290 PF00994 Probable molybdopterin binding domain FDE89_RS01290 PF02464 Competence-damaged protein FDE89_RS01290 PF18146 Damage-inducible protein CinA KH domain FDE89_RS01300 PF18011 C-terminal domain found in long catalases FDE89_RS01300 PF06628 Catalase-related immune-responsive FDE89_RS01300 PF00199 Catalase FDE89_RS01325 PF00717 Peptidase S24-like FDE89_RS01335 PF13404 AsnC-type helix-turn-helix domain FDE89_RS01335 PF01037 Lrp/AsnC ligand binding domain FDE89_RS01345 PF00512 His Kinase A (phospho-acceptor) domain FDE89_RS01345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDE89_RS01345 PF00072 Response regulator receiver domain FDE89_RS01345 PF09308 LuxQ, periplasmic FDE89_RS01350 PF00072 Response regulator receiver domain FDE89_RS01365 PF00528 Binding-protein-dependent transport system inner membrane component FDE89_RS01370 PF00528 Binding-protein-dependent transport system inner membrane component FDE89_RS01375 PF00005 ABC transporter FDE89_RS01380 PF00497 Bacterial extracellular solute-binding proteins, family 3 FDE89_RS01385 PF00497 Bacterial extracellular solute-binding proteins, family 3 FDE89_RS01395 PF03466 LysR substrate binding domain FDE89_RS01395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDE89_RS01400 PF01810 LysE type translocator FDE89_RS01405 PF00266 Aminotransferase class-V FDE89_RS01415 PF00132 Bacterial transferase hexapeptide (six repeats) FDE89_RS01420 PF00581 Rhodanese-like domain FDE89_RS01430 PF03466 LysR substrate binding domain FDE89_RS01430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDE89_RS01435 PF02798 Glutathione S-transferase, N-terminal domain FDE89_RS01440 PF02798 Glutathione S-transferase, N-terminal domain FDE89_RS01440 PF14834 Glutathione S-transferase, C-terminal domain FDE89_RS01445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDE89_RS01445 PF03466 LysR substrate binding domain FDE89_RS01450 PF03788 LrgA family FDE89_RS01455 PF04172 LrgB-like family FDE89_RS01460 PF00155 Aminotransferase class I and II FDE89_RS01460 PF00392 Bacterial regulatory proteins, gntR family FDE89_RS01475 PF07690 Major Facilitator Superfamily FDE89_RS01480 PF16957 Malonate decarboxylase, alpha subunit, transporter FDE89_RS01485 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase FDE89_RS01490 PF06857 Malonate decarboxylase delta subunit (MdcD) FDE89_RS01505 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG FDE89_RS01510 PF00698 Acyl transferase domain FDE89_RS01525 PF03466 LysR substrate binding domain FDE89_RS01525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDE89_RS01530 PF00155 Aminotransferase class I and II FDE89_RS01530 PF00392 Bacterial regulatory proteins, gntR family FDE89_RS01540 PF02322 Cytochrome bd terminal oxidase subunit II FDE89_RS01545 PF01654 Cytochrome bd terminal oxidase subunit I FDE89_RS01560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDE89_RS01560 PF02770 Acyl-CoA dehydrogenase, middle domain FDE89_RS01560 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FDE89_RS01565 PF00296 Luciferase-like monooxygenase FDE89_RS01570 PF00083 Sugar (and other) transporter FDE89_RS01580 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FDE89_RS01585 PF00005 ABC transporter FDE89_RS01590 PF00528 Binding-protein-dependent transport system inner membrane component FDE89_RS01595 PF02668 Taurine catabolism dioxygenase TauD, TfdA family FDE89_RS01600 PF01177 Asp/Glu/Hydantoin racemase FDE89_RS01605 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin FDE89_RS01615 PF03466 LysR substrate binding domain FDE89_RS01615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDE89_RS01625 PF13382 Adenine deaminase C-terminal domain FDE89_RS01625 PF01979 Amidohydrolase family FDE89_RS01635 PF03960 ArsC family FDE89_RS01640 PF01022 Bacterial regulatory protein, arsR family FDE89_RS01645 PF01758 Sodium Bile acid symporter family FDE89_RS01650 PF03466 LysR substrate binding domain FDE89_RS01650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDE89_RS01665 PF13192 Thioredoxin domain FDE89_RS01665 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDE89_RS01680 PF00132 Bacterial transferase hexapeptide (six repeats) FDE89_RS01685 PF00588 SpoU rRNA Methylase family FDE89_RS01690 PF07733 Bacterial DNA polymerase III alpha NTPase domain FDE89_RS01690 PF14579 Helix-hairpin-helix motif FDE89_RS01690 PF01336 OB-fold nucleic acid binding domain FDE89_RS01690 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FDE89_RS01690 PF02811 PHP domain FDE89_RS01695 PF00710 Asparaginase, N-terminal FDE89_RS01695 PF17763 Glutaminase/Asparaginase C-terminal domain FDE89_RS01700 PF00375 Sodium:dicarboxylate symporter family FDE89_RS01705 PF00155 Aminotransferase class I and II FDE89_RS01710 PF01641 SelR domain FDE89_RS01715 PF00255 Glutathione peroxidase FDE89_RS01730 PF00155 Aminotransferase class I and II FDE89_RS01735 PF01966 HD domain FDE89_RS01735 PF01909 Nucleotidyltransferase domain FDE89_RS01735 PF08335 GlnD PII-uridylyltransferase FDE89_RS01740 PF02222 ATP-grasp domain FDE89_RS01750 PF05437 Branched-chain amino acid transport protein (AzlD) FDE89_RS01755 PF03591 AzlC protein FDE89_RS01780 PF06071 Protein of unknown function (DUF933) FDE89_RS01780 PF01926 50S ribosome-binding GTPase FDE89_RS01785 PF00528 Binding-protein-dependent transport system inner membrane component FDE89_RS01790 PF00005 ABC transporter FDE89_RS01790 PF09383 NIL domain FDE89_RS01795 PF03180 NLPA lipoprotein FDE89_RS01800 PF03180 NLPA lipoprotein FDE89_RS01805 PF00296 Luciferase-like monooxygenase FDE89_RS01815 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FDE89_RS01815 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDE89_RS01830 PF00528 Binding-protein-dependent transport system inner membrane component FDE89_RS01835 PF00528 Binding-protein-dependent transport system inner membrane component FDE89_RS01840 PF00005 ABC transporter FDE89_RS01850 PF01037 Lrp/AsnC ligand binding domain FDE89_RS01855 PF01709 Transcriptional regulator FDE89_RS01865 PF00440 Bacterial regulatory proteins, tetR family FDE89_RS01885 PF03466 LysR substrate binding domain FDE89_RS01885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDE89_RS01895 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin FDE89_RS01905 PF00892 EamA-like transporter family FDE89_RS01935 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FDE89_RS01935 PF02753 Pili assembly chaperone PapD, C-terminal domain FDE89_RS01940 PF16970 Type-1 fimbrial protein, A FDE89_RS01955 PF04055 Radical SAM superfamily FDE89_RS01955 PF06968 Biotin and Thiamin Synthesis associated domain FDE89_RS01960 PF08331 Domain of unknown function (DUF1730) FDE89_RS01965 PF01256 Carbohydrate kinase FDE89_RS01965 PF03853 YjeF-related protein N-terminus FDE89_RS01970 PF02075 Crossover junction endodeoxyribonuclease RuvC FDE89_RS01985 PF00905 Penicillin binding protein transpeptidase domain FDE89_RS02005 PF00438 S-adenosylmethionine synthetase, N-terminal domain FDE89_RS02005 PF02772 S-adenosylmethionine synthetase, central domain FDE89_RS02005 PF02773 S-adenosylmethionine synthetase, C-terminal domain FDE89_RS02010 PF00456 Transketolase, thiamine diphosphate binding domain FDE89_RS02010 PF02780 Transketolase, C-terminal domain FDE89_RS02010 PF02779 Transketolase, pyrimidine binding domain FDE89_RS02020 PF04264 YceI-like domain FDE89_RS02030 PF09992 Phosphodiester glycosidase FDE89_RS02040 PF05958 tRNA (Uracil-5-)-methyltransferase FDE89_RS02045 PF04229 GrpB protein FDE89_RS02050 PF00171 Aldehyde dehydrogenase family FDE89_RS02050 PF01619 Proline dehydrogenase FDE89_RS02050 PF14850 DNA-binding domain of Proline dehydrogenase FDE89_RS02050 PF18327 Proline utilization A proline dehydrogenase N-terminal domain FDE89_RS02055 PF01037 Lrp/AsnC ligand binding domain FDE89_RS02060 PF00474 Sodium:solute symporter family FDE89_RS02065 PF02146 Sir2 family FDE89_RS02070 PF01597 Glycine cleavage H-protein FDE89_RS02075 PF12833 Helix-turn-helix domain FDE89_RS02075 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term FDE89_RS02085 PF00005 ABC transporter FDE89_RS02085 PF00664 ABC transporter transmembrane region FDE89_RS02090 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) FDE89_RS02095 PF06912 Protein of unknown function (DUF1275) FDE89_RS02100 PF00375 Sodium:dicarboxylate symporter family FDE89_RS02115 PF08007 Cupin superfamily protein FDE89_RS02120 PF02545 Maf-like protein FDE89_RS02130 PF00162 Phosphoglycerate kinase FDE89_RS02140 PF01116 Fructose-bisphosphate aldolase class-II FDE89_RS02145 PF00639 PPIC-type PPIASE domain FDE89_RS02145 PF09312 SurA N-terminal domain FDE89_RS02150 PF03968 OstA-like protein FDE89_RS02150 PF04453 LPS transport system D FDE89_RS02155 PF01636 Phosphotransferase enzyme family FDE89_RS02160 PF00483 Nucleotidyl transferase FDE89_RS02165 PF02527 rRNA small subunit methyltransferase G FDE89_RS02170 PF13614 AAA domain FDE89_RS02175 PF17762 HTH domain found in ParB protein FDE89_RS02175 PF02195 ParB-like nuclease domain FDE89_RS02180 PF01618 MotA/TolQ/ExbB proton channel family FDE89_RS02190 PF00664 ABC transporter transmembrane region FDE89_RS02190 PF00005 ABC transporter FDE89_RS02195 PF02606 Tetraacyldisaccharide-1-P 4'-kinase FDE89_RS02200 PF02348 Cytidylyltransferase FDE89_RS02205 PF09115 DNA polymerase III, delta subunit, C terminal FDE89_RS02215 PF01026 TatD related DNase FDE89_RS02230 PF07963 Prokaryotic N-terminal methylation motif FDE89_RS02230 PF02501 Type II secretion system (T2SS), protein I FDE89_RS02235 PF11612 Type II secretion system (T2SS), protein J FDE89_RS02235 PF07963 Prokaryotic N-terminal methylation motif FDE89_RS02240 PF03934 Type II secretion system (T2SS), protein K FDE89_RS02250 PF03167 Uracil DNA glycosylase superfamily FDE89_RS02260 PF14437 MafB19-like deaminase FDE89_RS02270 PF02224 Cytidylate kinase FDE89_RS02275 PF00575 S1 RNA binding domain FDE89_RS02280 PF00216 Bacterial DNA-binding protein FDE89_RS02290 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FDE89_RS02300 PF00743 Flavin-binding monooxygenase-like FDE89_RS02310 PF03969 AFG1-like ATPase FDE89_RS02315 PF01274 Malate synthase FDE89_RS02325 PF02472 Biopolymer transport protein ExbD/TolR FDE89_RS02330 PF02472 Biopolymer transport protein ExbD/TolR FDE89_RS02335 PF01618 MotA/TolQ/ExbB proton channel family FDE89_RS02345 PF07715 TonB-dependent Receptor Plug Domain FDE89_RS02345 PF00593 TonB dependent receptor FDE89_RS02365 PF01432 Peptidase family M3 FDE89_RS02370 PF00528 Binding-protein-dependent transport system inner membrane component FDE89_RS02375 PF00528 Binding-protein-dependent transport system inner membrane component FDE89_RS02380 PF00005 ABC transporter FDE89_RS02380 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FDE89_RS02395 PF00459 Inositol monophosphatase family FDE89_RS02405 PF01649 Ribosomal protein S20 FDE89_RS02410 PF13460 NAD(P)H-binding FDE89_RS02415 PF03737 Aldolase/RraA FDE89_RS02435 PF03461 TRCF domain FDE89_RS02435 PF00271 Helicase conserved C-terminal domain FDE89_RS02435 PF00270 DEAD/DEAH box helicase FDE89_RS02435 PF02559 CarD-like/TRCF domain FDE89_RS02435 PF17757 UvrB interaction domain FDE89_RS02445 PF00211 Adenylate and Guanylate cyclase catalytic domain FDE89_RS02450 PF00111 2Fe-2S iron-sulfur cluster binding domain FDE89_RS02455 PF00012 Hsp70 protein FDE89_RS02460 PF00226 DnaJ domain FDE89_RS02460 PF07743 HSCB C-terminal oligomerisation domain FDE89_RS02465 PF01521 Iron-sulphur cluster biosynthesis FDE89_RS02470 PF01592 NifU-like N terminal domain FDE89_RS02475 PF00266 Aminotransferase class-V FDE89_RS02480 PF02082 Transcriptional regulator FDE89_RS02495 PF00216 Bacterial DNA-binding protein FDE89_RS02500 PF00639 PPIC-type PPIASE domain FDE89_RS02500 PF09312 SurA N-terminal domain FDE89_RS02505 PF12852 Cupin FDE89_RS02505 PF12833 Helix-turn-helix domain FDE89_RS02510 PF00487 Fatty acid desaturase FDE89_RS02515 PF02770 Acyl-CoA dehydrogenase, middle domain FDE89_RS02515 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDE89_RS02515 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDE89_RS02520 PF02770 Acyl-CoA dehydrogenase, middle domain FDE89_RS02520 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDE89_RS02520 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDE89_RS02525 PF03109 ABC1 family FDE89_RS02535 PF04073 Aminoacyl-tRNA editing domain FDE89_RS02540 PF04183 IucA / IucC family FDE89_RS02540 PF06276 Ferric iron reductase FhuF-like transporter FDE89_RS02545 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) FDE89_RS02550 PF07690 Major Facilitator Superfamily FDE89_RS02555 PF04183 IucA / IucC family FDE89_RS02555 PF06276 Ferric iron reductase FhuF-like transporter FDE89_RS02560 PF06276 Ferric iron reductase FhuF-like transporter FDE89_RS02560 PF04183 IucA / IucC family FDE89_RS02575 PF00593 TonB dependent receptor FDE89_RS02575 PF07715 TonB-dependent Receptor Plug Domain FDE89_RS02615 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase FDE89_RS02620 PF02277 Phosphoribosyltransferase FDE89_RS02635 PF02654 Cobalamin-5-phosphate synthase FDE89_RS02640 PF00793 DAHP synthetase I family FDE89_RS02645 PF01925 Sulfite exporter TauE/SafE FDE89_RS02665 PF00593 TonB dependent receptor FDE89_RS02665 PF07715 TonB-dependent Receptor Plug Domain FDE89_RS02670 PF02684 Lipid-A-disaccharide synthetase FDE89_RS02680 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDE89_RS02720 PF01230 HIT domain FDE89_RS02755 PF08241 Methyltransferase domain FDE89_RS02760 PF00561 alpha/beta hydrolase fold FDE89_RS02765 PF01053 Cys/Met metabolism PLP-dependent enzyme FDE89_RS02775 PF02575 YbaB/EbfC DNA-binding family FDE89_RS02780 PF13662 Toprim domain FDE89_RS02780 PF02132 RecR protein FDE89_RS02785 PF01612 3'-5' exonuclease FDE89_RS02785 PF00570 HRDC domain FDE89_RS02805 PF05166 YcgL domain FDE89_RS02815 PF01434 Peptidase family M41 FDE89_RS02815 PF00004 ATPase family associated with various cellular activities (AAA) FDE89_RS02815 PF17862 AAA+ lid domain FDE89_RS02825 PF00291 Pyridoxal-phosphate dependent enzyme FDE89_RS02830 PF05175 Methyltransferase small domain FDE89_RS02835 PF01264 Chorismate synthase FDE89_RS02840 PF08448 PAS fold FDE89_RS02840 PF00990 Diguanylate cyclase, GGDEF domain FDE89_RS02855 PF04055 Radical SAM superfamily FDE89_RS02860 PF00676 Dehydrogenase E1 component FDE89_RS02865 PF02780 Transketolase, C-terminal domain FDE89_RS02865 PF02779 Transketolase, pyrimidine binding domain FDE89_RS02870 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FDE89_RS02870 PF02817 e3 binding domain FDE89_RS02870 PF00364 Biotin-requiring enzyme FDE89_RS02875 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDE89_RS02875 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FDE89_RS02880 PF00106 short chain dehydrogenase FDE89_RS02885 PF00107 Zinc-binding dehydrogenase FDE89_RS02885 PF08240 Alcohol dehydrogenase GroES-like domain FDE89_RS02890 PF01062 Bestrophin, RFP-TM, chloride channel FDE89_RS02895 PF00158 Sigma-54 interaction domain FDE89_RS02895 PF02954 Bacterial regulatory protein, Fis family FDE89_RS02895 PF00072 Response regulator receiver domain FDE89_RS02900 PF04273 Putative phosphatase (DUF442) FDE89_RS02900 PF00753 Metallo-beta-lactamase superfamily FDE89_RS02905 PF04273 Putative phosphatase (DUF442) FDE89_RS02905 PF00753 Metallo-beta-lactamase superfamily FDE89_RS02910 PF01925 Sulfite exporter TauE/SafE FDE89_RS02925 PF12833 Helix-turn-helix domain FDE89_RS02925 PF06445 GyrI-like small molecule binding domain FDE89_RS02930 PF01638 HxlR-like helix-turn-helix FDE89_RS02935 PF02525 Flavodoxin-like fold FDE89_RS02945 PF00392 Bacterial regulatory proteins, gntR family FDE89_RS02945 PF07702 UTRA domain FDE89_RS02960 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FDE89_RS02965 PF00528 Binding-protein-dependent transport system inner membrane component FDE89_RS02970 PF00005 ABC transporter FDE89_RS02985 PF00083 Sugar (and other) transporter FDE89_RS02990 PF00593 TonB dependent receptor FDE89_RS02990 PF07715 TonB-dependent Receptor Plug Domain FDE89_RS02995 PF00206 Lyase FDE89_RS02995 PF10415 Fumarase C C-terminus FDE89_RS03010 PF03466 LysR substrate binding domain FDE89_RS03010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDE89_RS03015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDE89_RS03015 PF03466 LysR substrate binding domain FDE89_RS03020 PF02803 Thiolase, C-terminal domain FDE89_RS03020 PF00108 Thiolase, N-terminal domain FDE89_RS03025 PF02667 Short chain fatty acid transporter FDE89_RS03030 PF01144 Coenzyme A transferase FDE89_RS03035 PF01144 Coenzyme A transferase FDE89_RS03040 PF03466 LysR substrate binding domain FDE89_RS03040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDE89_RS03065 PF12833 Helix-turn-helix domain FDE89_RS03065 PF06719 AraC-type transcriptional regulator N-terminus FDE89_RS03075 PF01738 Dienelactone hydrolase family FDE89_RS03090 PF01613 Flavin reductase like domain FDE89_RS03100 PF12833 Helix-turn-helix domain FDE89_RS03100 PF14525 AraC-binding-like domain FDE89_RS03105 PF00970 Oxidoreductase FAD-binding domain FDE89_RS03105 PF00175 Oxidoreductase NAD-binding domain FDE89_RS03105 PF00111 2Fe-2S iron-sulfur cluster binding domain FDE89_RS03110 PF00866 Ring hydroxylating beta subunit FDE89_RS03115 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FDE89_RS03115 PF00355 Rieske [2Fe-2S] domain FDE89_RS03120 PF03459 TOBE domain FDE89_RS03120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDE89_RS03130 PF00528 Binding-protein-dependent transport system inner membrane component FDE89_RS03135 PF03459 TOBE domain FDE89_RS03135 PF00005 ABC transporter FDE89_RS03140 PF00106 short chain dehydrogenase FDE89_RS03145 PF00857 Isochorismatase family FDE89_RS03145 PF00550 Phosphopantetheine attachment site FDE89_RS03155 PF00149 Calcineurin-like phosphoesterase FDE89_RS03160 PF13089 Polyphosphate kinase N-terminal domain FDE89_RS03160 PF17941 Polyphosphate kinase C-terminal domain 1 FDE89_RS03160 PF13090 Polyphosphate kinase C-terminal domain 2 FDE89_RS03160 PF02503 Polyphosphate kinase middle domain FDE89_RS03165 PF08042 PqqA family FDE89_RS03170 PF12706 Beta-lactamase superfamily domain FDE89_RS03175 PF03070 TENA/THI-4/PQQC family FDE89_RS03180 PF05402 Coenzyme PQQ synthesis protein D (PqqD) FDE89_RS03185 PF13186 Iron-sulfur cluster-binding domain FDE89_RS03185 PF04055 Radical SAM superfamily FDE89_RS03190 PF01244 Membrane dipeptidase (Peptidase family M19) FDE89_RS03210 PF13091 PLD-like domain FDE89_RS03225 PF00199 Catalase FDE89_RS03235 PF08240 Alcohol dehydrogenase GroES-like domain FDE89_RS03235 PF00107 Zinc-binding dehydrogenase FDE89_RS03245 PF00419 Fimbrial protein FDE89_RS03250 PF00577 Outer membrane usher protein FDE89_RS03250 PF13953 PapC C-terminal domain FDE89_RS03250 PF13954 PapC N-terminal domain FDE89_RS03255 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FDE89_RS03255 PF02753 Pili assembly chaperone PapD, C-terminal domain FDE89_RS03265 PF16970 Type-1 fimbrial protein, A FDE89_RS03285 PF01266 FAD dependent oxidoreductase FDE89_RS03300 PF01593 Flavin containing amine oxidoreductase FDE89_RS03305 PF00743 Flavin-binding monooxygenase-like FDE89_RS03310 PF12146 Serine aminopeptidase, S33 FDE89_RS03315 PF02321 Outer membrane efflux protein FDE89_RS03320 PF00873 AcrB/AcrD/AcrF family FDE89_RS03325 PF00529 HlyD membrane-fusion protein of T1SS FDE89_RS03325 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDE89_RS03330 PF00486 Transcriptional regulatory protein, C terminal FDE89_RS03330 PF00072 Response regulator receiver domain FDE89_RS03335 PF00672 HAMP domain FDE89_RS03335 PF00512 His Kinase A (phospho-acceptor) domain FDE89_RS03335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDE89_RS03335 PF16527 Two-component sensor protein CpxA, periplasmic domain FDE89_RS03345 PF12833 Helix-turn-helix domain FDE89_RS03345 PF02311 AraC-like ligand binding domain FDE89_RS03350 PF12146 Serine aminopeptidase, S33 FDE89_RS03405 PF13291 ACT domain FDE89_RS03405 PF04607 Region found in RelA / SpoT proteins FDE89_RS03405 PF02824 TGS domain FDE89_RS03415 PF01975 Survival protein SurE FDE89_RS03440 PF07690 Major Facilitator Superfamily FDE89_RS03445 PF13533 Biotin-lipoyl like FDE89_RS03450 PF01425 Amidase FDE89_RS03455 PF00196 Bacterial regulatory proteins, luxR family FDE89_RS03535 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FDE89_RS03540 PF14572 Phosphoribosyl synthetase-associated domain FDE89_RS03540 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FDE89_RS03560 PF00005 ABC transporter FDE89_RS03565 PF01032 FecCD transport family FDE89_RS03575 PF00107 Zinc-binding dehydrogenase FDE89_RS03575 PF08240 Alcohol dehydrogenase GroES-like domain FDE89_RS03590 PF06719 AraC-type transcriptional regulator N-terminus FDE89_RS03590 PF12833 Helix-turn-helix domain FDE89_RS03595 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FDE89_RS03595 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FDE89_RS03600 PF07690 Major Facilitator Superfamily FDE89_RS03610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDE89_RS03610 PF03466 LysR substrate binding domain FDE89_RS03620 PF00920 Dehydratase family FDE89_RS03625 PF00171 Aldehyde dehydrogenase family FDE89_RS03640 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDE89_RS03640 PF00529 HlyD membrane-fusion protein of T1SS FDE89_RS03660 PF03737 Aldolase/RraA FDE89_RS03665 PF01842 ACT domain FDE89_RS03665 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FDE89_RS03665 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FDE89_RS03670 PF07690 Major Facilitator Superfamily FDE89_RS03690 PF03466 LysR substrate binding domain FDE89_RS03690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDE89_RS03700 PF08450 SMP-30/Gluconolactonase/LRE-like region FDE89_RS03705 PF00392 Bacterial regulatory proteins, gntR family FDE89_RS03705 PF07702 UTRA domain FDE89_RS03715 PF04909 Amidohydrolase FDE89_RS03720 PF07690 Major Facilitator Superfamily FDE89_RS03735 PF05860 haemagglutination activity domain FDE89_RS03735 PF13018 Extended Signal Peptide of Type V secretion system FDE89_RS03735 PF13332 Hemagglutinin repeat FDE89_RS03735 PF04829 Pre-toxin domain with VENN motif FDE89_RS03740 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB FDE89_RS03740 PF17287 POTRA domain FDE89_RS03740 PF08479 POTRA domain, ShlB-type FDE89_RS03755 PF07687 Peptidase dimerisation domain FDE89_RS03755 PF01546 Peptidase family M20/M25/M40 FDE89_RS03765 PF00999 Sodium/hydrogen exchanger family FDE89_RS03765 PF02254 TrkA-N domain FDE89_RS03770 PF07995 Glucose / Sorbosone dehydrogenase FDE89_RS03780 PF00857 Isochorismatase family FDE89_RS03790 PF08359 YsiA-like protein, C-terminal region FDE89_RS03790 PF00440 Bacterial regulatory proteins, tetR family FDE89_RS03795 PF12706 Beta-lactamase superfamily domain FDE89_RS03805 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDE89_RS03815 PF09278 MerR, DNA binding FDE89_RS03815 PF00376 MerR family regulatory protein FDE89_RS03820 PF01872 RibD C-terminal domain FDE89_RS03825 PF00106 short chain dehydrogenase FDE89_RS03830 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FDE89_RS03830 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDE89_RS03835 PF01047 MarR family FDE89_RS03840 PF07859 alpha/beta hydrolase fold FDE89_RS03860 PF00199 Catalase FDE89_RS03860 PF06628 Catalase-related immune-responsive FDE89_RS03865 PF00561 alpha/beta hydrolase fold FDE89_RS03875 PF00171 Aldehyde dehydrogenase family FDE89_RS03880 PF08240 Alcohol dehydrogenase GroES-like domain FDE89_RS03880 PF00107 Zinc-binding dehydrogenase FDE89_RS03885 PF00474 Sodium:solute symporter family FDE89_RS03890 PF04341 Protein of unknown function, DUF485 FDE89_RS03895 PF00501 AMP-binding enzyme FDE89_RS03895 PF13193 AMP-binding enzyme C-terminal domain FDE89_RS03900 PF06506 Propionate catabolism activator FDE89_RS03900 PF02954 Bacterial regulatory protein, Fis family FDE89_RS03900 PF00158 Sigma-54 interaction domain FDE89_RS03910 PF02770 Acyl-CoA dehydrogenase, middle domain FDE89_RS03910 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDE89_RS03910 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDE89_RS03930 PF00171 Aldehyde dehydrogenase family FDE89_RS03940 PF07690 Major Facilitator Superfamily FDE89_RS03945 PF00920 Dehydratase family FDE89_RS03950 PF07729 FCD domain FDE89_RS03950 PF00392 Bacterial regulatory proteins, gntR family FDE89_RS03960 PF03466 LysR substrate binding domain FDE89_RS03960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDE89_RS03965 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FDE89_RS03965 PF13378 Enolase C-terminal domain-like FDE89_RS03970 PF02426 Muconolactone delta-isomerase FDE89_RS03975 PF00775 Dioxygenase FDE89_RS03975 PF04444 Catechol dioxygenase N terminus FDE89_RS03980 PF01144 Coenzyme A transferase FDE89_RS03985 PF01144 Coenzyme A transferase FDE89_RS03990 PF02803 Thiolase, C-terminal domain FDE89_RS03990 PF00108 Thiolase, N-terminal domain FDE89_RS03995 PF12146 Serine aminopeptidase, S33 FDE89_RS04000 PF01804 Penicillin amidase FDE89_RS04005 PF00171 Aldehyde dehydrogenase family FDE89_RS04030 PF02311 AraC-like ligand binding domain FDE89_RS04030 PF12833 Helix-turn-helix domain FDE89_RS04035 PF01613 Flavin reductase like domain FDE89_RS04040 PF00175 Oxidoreductase NAD-binding domain FDE89_RS04040 PF00111 2Fe-2S iron-sulfur cluster binding domain FDE89_RS04055 PF00355 Rieske [2Fe-2S] domain FDE89_RS04055 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FDE89_RS04070 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FDE89_RS04075 PF01425 Amidase FDE89_RS04085 PF07690 Major Facilitator Superfamily FDE89_RS04095 PF00106 short chain dehydrogenase FDE89_RS04110 PF02770 Acyl-CoA dehydrogenase, middle domain FDE89_RS04110 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDE89_RS04110 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDE89_RS04115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDE89_RS04115 PF03466 LysR substrate binding domain FDE89_RS04120 PF09339 IclR helix-turn-helix domain FDE89_RS04120 PF01614 Bacterial transcriptional regulator FDE89_RS04125 PF00753 Metallo-beta-lactamase superfamily FDE89_RS04135 PF04143 Sulphur transport FDE89_RS04145 PF01011 PQQ enzyme repeat FDE89_RS04145 PF13360 PQQ-like domain FDE89_RS04155 PF05048 Periplasmic copper-binding protein (NosD) FDE89_RS04160 PF01487 Type I 3-dehydroquinase FDE89_RS04165 PF00775 Dioxygenase FDE89_RS04170 PF00775 Dioxygenase FDE89_RS04170 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal FDE89_RS04175 PF02627 Carboxymuconolactone decarboxylase family FDE89_RS04180 PF07690 Major Facilitator Superfamily FDE89_RS04185 PF00561 alpha/beta hydrolase fold FDE89_RS04190 PF10397 Adenylosuccinate lyase C-terminus FDE89_RS04190 PF00206 Lyase FDE89_RS04195 PF00108 Thiolase, N-terminal domain FDE89_RS04195 PF02803 Thiolase, C-terminal domain FDE89_RS04200 PF01144 Coenzyme A transferase FDE89_RS04205 PF01144 Coenzyme A transferase FDE89_RS04210 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FDE89_RS04215 PF04977 Septum formation initiator FDE89_RS04220 PF04239 Protein of unknown function (DUF421) FDE89_RS04225 PF00113 Enolase, C-terminal TIM barrel domain FDE89_RS04225 PF03952 Enolase, N-terminal domain FDE89_RS04230 PF00793 DAHP synthetase I family FDE89_RS04235 PF00117 Glutamine amidotransferase class-I FDE89_RS04235 PF06418 CTP synthase N-terminus FDE89_RS04265 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDE89_RS04265 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FDE89_RS04280 PF00793 DAHP synthetase I family FDE89_RS04285 PF02694 Uncharacterised BCR, YnfA/UPF0060 family FDE89_RS04290 PF02861 Clp amino terminal domain, pathogenicity island component FDE89_RS04290 PF17871 AAA lid domain FDE89_RS04290 PF07724 AAA domain (Cdc48 subfamily) FDE89_RS04290 PF00004 ATPase family associated with various cellular activities (AAA) FDE89_RS04290 PF10431 C-terminal, D2-small domain, of ClpB protein FDE89_RS04295 PF02617 ATP-dependent Clp protease adaptor protein ClpS FDE89_RS04305 PF02774 Semialdehyde dehydrogenase, dimerisation domain FDE89_RS04305 PF01118 Semialdehyde dehydrogenase, NAD binding domain FDE89_RS04320 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FDE89_RS04325 PF00291 Pyridoxal-phosphate dependent enzyme FDE89_RS04325 PF00585 C-terminal regulatory domain of Threonine dehydratase FDE89_RS04330 PF02254 TrkA-N domain FDE89_RS04330 PF02080 TrkA-C domain FDE89_RS04340 PF02253 Phospholipase A1 FDE89_RS04345 PF00675 Insulinase (Peptidase family M16) FDE89_RS04345 PF08367 Peptidase M16C associated FDE89_RS04345 PF05193 Peptidase M16 inactive domain FDE89_RS04350 PF07715 TonB-dependent Receptor Plug Domain FDE89_RS04350 PF00593 TonB dependent receptor FDE89_RS04355 PF00294 pfkB family carbohydrate kinase FDE89_RS04365 PF07290 Protein of unknown function (DUF1449) FDE89_RS04385 PF01654 Cytochrome bd terminal oxidase subunit I FDE89_RS04390 PF02322 Cytochrome bd terminal oxidase subunit II FDE89_RS04395 PF08173 Membrane bound YbgT-like protein FDE89_RS04410 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) FDE89_RS04420 PF00448 SRP54-type protein, GTPase domain FDE89_RS04420 PF02881 SRP54-type protein, helical bundle domain FDE89_RS04445 PF00478 IMP dehydrogenase / GMP reductase domain FDE89_RS04445 PF00571 CBS domain FDE89_RS04450 PF00202 Aminotransferase class-III FDE89_RS04455 PF00462 Glutaredoxin FDE89_RS04465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDE89_RS04465 PF03466 LysR substrate binding domain FDE89_RS04470 PF00557 Metallopeptidase family M24 FDE89_RS04475 PF05525 Branched-chain amino acid transport protein FDE89_RS04500 PF00381 PTS HPr component phosphorylation site FDE89_RS04500 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FDE89_RS04500 PF02896 PEP-utilising enzyme, TIM barrel domain FDE89_RS04500 PF00391 PEP-utilising enzyme, mobile domain FDE89_RS04500 PF05524 PEP-utilising enzyme, N-terminal FDE89_RS04505 PF00294 pfkB family carbohydrate kinase FDE89_RS04510 PF02378 Phosphotransferase system, EIIC FDE89_RS04510 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FDE89_RS04530 PF00563 EAL domain FDE89_RS04530 PF00990 Diguanylate cyclase, GGDEF domain FDE89_RS04530 PF03707 Bacterial signalling protein N terminal repeat FDE89_RS04540 PF07995 Glucose / Sorbosone dehydrogenase FDE89_RS04545 PF02586 SOS response associated peptidase (SRAP) FDE89_RS04550 PF01740 STAS domain FDE89_RS04550 PF00916 Sulfate permease family FDE89_RS04555 PF00082 Subtilase family FDE89_RS04555 PF05922 Peptidase inhibitor I9 FDE89_RS04565 PF00324 Amino acid permease FDE89_RS04570 PF00266 Aminotransferase class-V FDE89_RS04575 PF01037 Lrp/AsnC ligand binding domain FDE89_RS04600 PF13419 Haloacid dehalogenase-like hydrolase FDE89_RS04605 PF01479 S4 domain FDE89_RS04610 PF00154 recA bacterial DNA recombination protein FDE89_RS04615 PF02631 RecX family FDE89_RS04630 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FDE89_RS04630 PF00132 Bacterial transferase hexapeptide (six repeats) FDE89_RS04635 PF07977 FabA-like domain FDE89_RS04640 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FDE89_RS04640 PF00132 Bacterial transferase hexapeptide (six repeats) FDE89_RS04650 PF01103 Surface antigen FDE89_RS04650 PF07244 Surface antigen variable number repeat FDE89_RS04655 PF13180 PDZ domain FDE89_RS04655 PF17820 PDZ domain FDE89_RS04655 PF02163 Peptidase family M50 FDE89_RS04660 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FDE89_RS04660 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FDE89_RS04660 PF13288 DXP reductoisomerase C-terminal domain FDE89_RS04670 PF01255 Putative undecaprenyl diphosphate synthase FDE89_RS04675 PF01765 Ribosome recycling factor FDE89_RS04680 PF00696 Amino acid kinase family FDE89_RS04685 PF00919 Uncharacterized protein family UPF0004 FDE89_RS04685 PF18693 TRAM domain FDE89_RS04685 PF04055 Radical SAM superfamily FDE89_RS04695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDE89_RS04695 PF00989 PAS fold FDE89_RS04695 PF00512 His Kinase A (phospho-acceptor) domain FDE89_RS04700 PF00072 Response regulator receiver domain FDE89_RS04700 PF02954 Bacterial regulatory protein, Fis family FDE89_RS04700 PF00158 Sigma-54 interaction domain FDE89_RS04705 PF00440 Bacterial regulatory proteins, tetR family FDE89_RS04720 PF02542 YgbB family FDE89_RS04730 PF01266 FAD dependent oxidoreductase FDE89_RS04755 PF10415 Fumarase C C-terminus FDE89_RS04755 PF00206 Lyase FDE89_RS04760 PF16363 GDP-mannose 4,6 dehydratase FDE89_RS04765 PF02635 DsrE/DsrF-like family FDE89_RS04785 PF00892 EamA-like transporter family FDE89_RS04790 PF00392 Bacterial regulatory proteins, gntR family FDE89_RS04790 PF00155 Aminotransferase class I and II FDE89_RS04795 PF01638 HxlR-like helix-turn-helix FDE89_RS04800 PF00994 Probable molybdopterin binding domain FDE89_RS04800 PF03454 MoeA C-terminal region (domain IV) FDE89_RS04800 PF03453 MoeA N-terminal region (domain I and II) FDE89_RS04805 PF01967 MoaC family FDE89_RS04805 PF00994 Probable molybdopterin binding domain FDE89_RS04810 PF02391 MoaE protein FDE89_RS04820 PF04055 Radical SAM superfamily FDE89_RS04820 PF06463 Molybdenum Cofactor Synthesis C FDE89_RS04825 PF01568 Molydopterin dinucleotide binding domain FDE89_RS04825 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FDE89_RS04825 PF00384 Molybdopterin oxidoreductase FDE89_RS04830 PF12804 MobA-like NTP transferase domain FDE89_RS04835 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FDE89_RS04835 PF01568 Molydopterin dinucleotide binding domain FDE89_RS04835 PF00384 Molybdopterin oxidoreductase FDE89_RS04835 PF04324 BFD-like [2Fe-2S] binding domain FDE89_RS04840 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FDE89_RS04840 PF18267 Rubredoxin NAD+ reductase C-terminal domain FDE89_RS04840 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FDE89_RS04840 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDE89_RS04840 PF04324 BFD-like [2Fe-2S] binding domain FDE89_RS04845 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FDE89_RS04845 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FDE89_RS04845 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDE89_RS04845 PF13806 Rieske-like [2Fe-2S] domain FDE89_RS04845 PF04324 BFD-like [2Fe-2S] binding domain FDE89_RS04845 PF18267 Rubredoxin NAD+ reductase C-terminal domain FDE89_RS04855 PF00486 Transcriptional regulatory protein, C terminal FDE89_RS04855 PF00072 Response regulator receiver domain FDE89_RS04860 PF00005 ABC transporter FDE89_RS04865 PF13438 Domain of unknown function (DUF4113) FDE89_RS04865 PF00817 impB/mucB/samB family FDE89_RS04865 PF11799 impB/mucB/samB family C-terminal domain FDE89_RS04870 PF01220 Dehydroquinase class II FDE89_RS04875 PF00364 Biotin-requiring enzyme FDE89_RS04880 PF00289 Biotin carboxylase, N-terminal domain FDE89_RS04880 PF02785 Biotin carboxylase C-terminal domain FDE89_RS04880 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FDE89_RS04890 PF12832 MFS_1 like family FDE89_RS04910 PF01645 Conserved region in glutamate synthase FDE89_RS04925 PF01565 FAD binding domain FDE89_RS04925 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FDE89_RS04930 PF01451 Low molecular weight phosphotyrosine protein phosphatase FDE89_RS04940 PF00465 Iron-containing alcohol dehydrogenase FDE89_RS04945 PF03061 Thioesterase superfamily FDE89_RS04950 PF04185 Phosphoesterase family FDE89_RS04950 PF05506 Domain of unknown function (DUF756) FDE89_RS04955 PF12169 DNA polymerase III subunits gamma and tau domain III FDE89_RS04955 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding FDE89_RS04955 PF12170 DNA polymerase III tau subunit V interacting with alpha FDE89_RS04960 PF07690 Major Facilitator Superfamily FDE89_RS04970 PF00144 Beta-lactamase FDE89_RS04975 PF01575 MaoC like domain FDE89_RS04985 PF00108 Thiolase, N-terminal domain FDE89_RS04985 PF02803 Thiolase, C-terminal domain FDE89_RS04995 PF03466 LysR substrate binding domain FDE89_RS04995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDE89_RS05000 PF00923 Transaldolase/Fructose-6-phosphate aldolase FDE89_RS05005 PF01810 LysE type translocator FDE89_RS05010 PF01037 Lrp/AsnC ligand binding domain FDE89_RS05015 PF03594 Benzoate membrane transport protein FDE89_RS05020 PF02308 MgtC family FDE89_RS05025 PF00689 Cation transporting ATPase, C-terminus FDE89_RS05025 PF00690 Cation transporter/ATPase, N-terminus FDE89_RS05040 PF00582 Universal stress protein family FDE89_RS05045 PF12848 ABC transporter FDE89_RS05045 PF00005 ABC transporter FDE89_RS05065 PF00593 TonB dependent receptor FDE89_RS05065 PF07715 TonB-dependent Receptor Plug Domain FDE89_RS05095 PF00924 Mechanosensitive ion channel FDE89_RS05100 PF00593 TonB dependent receptor FDE89_RS05100 PF07715 TonB-dependent Receptor Plug Domain FDE89_RS05105 PF00440 Bacterial regulatory proteins, tetR family FDE89_RS05120 PF01037 Lrp/AsnC ligand binding domain FDE89_RS05125 PF01817 Chorismate mutase type II FDE89_RS05150 PF17432 Domain of unknown function (DUF3458_C) ARM repeats FDE89_RS05150 PF11940 Domain of unknown function (DUF3458) Ig-like fold FDE89_RS05150 PF01433 Peptidase family M1 domain FDE89_RS05165 PF02110 Hydroxyethylthiazole kinase family FDE89_RS05170 PF06445 GyrI-like small molecule binding domain FDE89_RS05180 PF14493 Helix-turn-helix domain FDE89_RS05180 PF05970 PIF1-like helicase FDE89_RS05185 PF00465 Iron-containing alcohol dehydrogenase FDE89_RS05200 PF00171 Aldehyde dehydrogenase family FDE89_RS05205 PF13520 Amino acid permease FDE89_RS05210 PF06751 Ethanolamine ammonia lyase large subunit (EutB) FDE89_RS05215 PF05985 Ethanolamine ammonia-lyase light chain (EutC) FDE89_RS05220 PF02540 NAD synthase FDE89_RS05220 PF00958 GMP synthase C terminal domain FDE89_RS05220 PF00117 Glutamine amidotransferase class-I FDE89_RS05225 PF00749 tRNA synthetases class I (E and Q), catalytic domain FDE89_RS05225 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain FDE89_RS05230 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FDE89_RS05235 PF00149 Calcineurin-like phosphoesterase FDE89_RS05245 PF00881 Nitroreductase family FDE89_RS05255 PF17209 Hfq protein FDE89_RS05265 PF01119 DNA mismatch repair protein, C-terminal domain FDE89_RS05265 PF08676 MutL C terminal dimerisation domain FDE89_RS05270 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE FDE89_RS05275 PF00849 RNA pseudouridylate synthase FDE89_RS05275 PF01479 S4 domain FDE89_RS05290 PF00849 RNA pseudouridylate synthase FDE89_RS05290 PF01479 S4 domain FDE89_RS05300 PF04284 Protein of unknown function (DUF441) FDE89_RS05305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDE89_RS05305 PF03466 LysR substrate binding domain FDE89_RS05320 PF07690 Major Facilitator Superfamily FDE89_RS05325 PF00027 Cyclic nucleotide-binding domain FDE89_RS05325 PF00520 Ion transport protein FDE89_RS05355 PF01103 Surface antigen FDE89_RS05355 PF07244 Surface antigen variable number repeat FDE89_RS05355 PF17243 POTRA domain TamA domain 1 FDE89_RS05360 PF07690 Major Facilitator Superfamily FDE89_RS05365 PF03232 Ubiquinone biosynthesis protein COQ7 FDE89_RS05375 PF00120 Glutamine synthetase, catalytic domain FDE89_RS05380 PF00486 Transcriptional regulatory protein, C terminal FDE89_RS05380 PF00072 Response regulator receiver domain FDE89_RS05385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDE89_RS05385 PF00512 His Kinase A (phospho-acceptor) domain FDE89_RS05385 PF13493 Domain of unknown function (DUF4118) FDE89_RS05385 PF02702 Osmosensitive K+ channel His kinase sensor domain FDE89_RS05390 PF02669 K+-transporting ATPase, c chain FDE89_RS05400 PF03814 Potassium-transporting ATPase A subunit FDE89_RS05415 PF03109 ABC1 family FDE89_RS05420 PF00899 ThiF family FDE89_RS05425 PF01613 Flavin reductase like domain FDE89_RS05430 PF13193 AMP-binding enzyme C-terminal domain FDE89_RS05430 PF00501 AMP-binding enzyme FDE89_RS05435 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDE89_RS05435 PF02770 Acyl-CoA dehydrogenase, middle domain FDE89_RS05435 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDE89_RS05440 PF00106 short chain dehydrogenase FDE89_RS05445 PF12833 Helix-turn-helix domain FDE89_RS05450 PF09084 NMT1/THI5 like FDE89_RS05455 PF00528 Binding-protein-dependent transport system inner membrane component FDE89_RS05460 PF17827 PrmC N-terminal domain FDE89_RS05460 PF13847 Methyltransferase domain FDE89_RS05465 PF00472 RF-1 domain FDE89_RS05465 PF03462 PCRF domain FDE89_RS05475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDE89_RS05475 PF03466 LysR substrate binding domain FDE89_RS05495 PF00296 Luciferase-like monooxygenase FDE89_RS05505 PF13994 PgaD-like protein FDE89_RS05510 PF00535 Glycosyl transferase family 2 FDE89_RS05515 PF14883 Hypothetical glycosyl hydrolase family 13 FDE89_RS05515 PF01522 Polysaccharide deacetylase FDE89_RS05525 PF03618 Kinase/pyrophosphorylase FDE89_RS05530 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FDE89_RS05530 PF02896 PEP-utilising enzyme, TIM barrel domain FDE89_RS05530 PF00391 PEP-utilising enzyme, mobile domain FDE89_RS05540 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FDE89_RS05540 PF06481 COX Aromatic Rich Motif FDE89_RS05545 PF00115 Cytochrome C and Quinol oxidase polypeptide I FDE89_RS05550 PF00510 Cytochrome c oxidase subunit III FDE89_RS05555 PF03626 Prokaryotic Cytochrome C oxidase subunit IV FDE89_RS05560 PF01040 UbiA prenyltransferase family FDE89_RS05565 PF01250 Ribosomal protein S6 FDE89_RS05570 PF01084 Ribosomal protein S18 FDE89_RS05575 PF01281 Ribosomal protein L9, N-terminal domain FDE89_RS05575 PF03948 Ribosomal protein L9, C-terminal domain FDE89_RS05580 PF03796 DnaB-like helicase C terminal domain FDE89_RS05580 PF00772 DnaB-like helicase N terminal domain FDE89_RS05585 PF01168 Alanine racemase, N-terminal domain FDE89_RS05585 PF00842 Alanine racemase, C-terminal domain FDE89_RS05595 PF01841 Transglutaminase-like superfamily FDE89_RS05595 PF08379 Bacterial transglutaminase-like N-terminal region FDE89_RS05605 PF14403 Circularly permuted ATP-grasp type 2 FDE89_RS05635 PF02954 Bacterial regulatory protein, Fis family FDE89_RS05640 PF02142 MGS-like domain FDE89_RS05640 PF01808 AICARFT/IMPCHase bienzyme FDE89_RS05645 PF02844 Phosphoribosylglycinamide synthetase, N domain FDE89_RS05645 PF02843 Phosphoribosylglycinamide synthetase, C domain FDE89_RS05645 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FDE89_RS05650 PF03180 NLPA lipoprotein FDE89_RS05655 PF09383 NIL domain FDE89_RS05655 PF00005 ABC transporter FDE89_RS05660 PF00528 Binding-protein-dependent transport system inner membrane component FDE89_RS05665 PF00753 Metallo-beta-lactamase superfamily FDE89_RS05665 PF16123 Hydroxyacylglutathione hydrolase C-terminus FDE89_RS05675 PF00375 Sodium:dicarboxylate symporter family FDE89_RS05720 PF03050 Transposase IS66 family FDE89_RS05720 PF13007 Transposase C of IS166 homeodomain FDE89_RS05720 PF13005 zinc-finger binding domain of transposase IS66 FDE89_RS05720 PF13817 IS66 C-terminal element FDE89_RS05730 PF01636 Phosphotransferase enzyme family FDE89_RS05735 PF12848 ABC transporter FDE89_RS05735 PF00005 ABC transporter FDE89_RS05755 PF07091 Ribosomal RNA methyltransferase (FmrO) FDE89_RS05775 PF02470 MlaD protein FDE89_RS05780 PF04403 Paraquat-inducible protein A FDE89_RS05790 PF02080 TrkA-C domain FDE89_RS05790 PF06826 Predicted Permease Membrane Region FDE89_RS05795 PF00155 Aminotransferase class I and II FDE89_RS05820 PF08946 Osmosensory transporter coiled coil FDE89_RS05820 PF00083 Sugar (and other) transporter FDE89_RS05870 PF00392 Bacterial regulatory proteins, gntR family FDE89_RS05870 PF07729 FCD domain FDE89_RS05880 PF03616 Sodium/glutamate symporter FDE89_RS05910 PF04076 Bacterial OB fold (BOF) protein FDE89_RS05940 PF00324 Amino acid permease FDE89_RS05945 PF00171 Aldehyde dehydrogenase family FDE89_RS05950 PF00202 Aminotransferase class-III FDE89_RS05955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDE89_RS05955 PF03466 LysR substrate binding domain FDE89_RS05980 PF00069 Protein kinase domain FDE89_RS06000 PF00814 Glycoprotease family FDE89_RS06005 PF01165 Ribosomal protein S21 FDE89_RS06010 PF09424 Yqey-like protein FDE89_RS06015 PF01435 Peptidase family M48 FDE89_RS06020 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FDE89_RS06020 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FDE89_RS06040 PF02674 Colicin V production protein FDE89_RS06045 PF01180 Dihydroorotate dehydrogenase FDE89_RS06065 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FDE89_RS06065 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FDE89_RS06070 PF00881 Nitroreductase family FDE89_RS06080 PF00271 Helicase conserved C-terminal domain FDE89_RS06080 PF00270 DEAD/DEAH box helicase FDE89_RS06085 PF00313 'Cold-shock' DNA-binding domain FDE89_RS06095 PF04542 Sigma-70 region 2 FDE89_RS06095 PF00140 Sigma-70 factor, region 1.2 FDE89_RS06095 PF04545 Sigma-70, region 4 FDE89_RS06100 PF04241 Protein of unknown function (DUF423) FDE89_RS06110 PF05690 Thiazole biosynthesis protein ThiG FDE89_RS06120 PF03883 Peroxide stress protein YaaA FDE89_RS06130 PF12706 Beta-lactamase superfamily domain FDE89_RS06135 PF07687 Peptidase dimerisation domain FDE89_RS06135 PF01546 Peptidase family M20/M25/M40 FDE89_RS06145 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FDE89_RS06150 PF01842 ACT domain FDE89_RS06150 PF01817 Chorismate mutase type II FDE89_RS06150 PF00800 Prephenate dehydratase FDE89_RS06155 PF00756 Putative esterase FDE89_RS06160 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDE89_RS06160 PF02770 Acyl-CoA dehydrogenase, middle domain FDE89_RS06160 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDE89_RS06165 PF00375 Sodium:dicarboxylate symporter family FDE89_RS06175 PF00591 Glycosyl transferase family, a/b domain FDE89_RS06175 PF02885 Glycosyl transferase family, helical bundle domain FDE89_RS06180 PF07023 Protein of unknown function (DUF1315) FDE89_RS06185 PF01513 ATP-NAD kinase FDE89_RS06190 PF00905 Penicillin binding protein transpeptidase domain FDE89_RS06190 PF00912 Transglycosylase FDE89_RS06190 PF14814 Bifunctional transglycosylase second domain FDE89_RS06200 PF00293 NUDIX domain FDE89_RS06210 PF00512 His Kinase A (phospho-acceptor) domain FDE89_RS06210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDE89_RS06210 PF08521 Two-component sensor kinase N-terminal FDE89_RS06215 PF00486 Transcriptional regulatory protein, C terminal FDE89_RS06215 PF00072 Response regulator receiver domain FDE89_RS06225 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FDE89_RS06225 PF00437 Type II/IV secretion system protein FDE89_RS06235 PF18389 TrmO C-terminal domain FDE89_RS06235 PF01980 tRNA-methyltransferase O FDE89_RS06240 PF00970 Oxidoreductase FAD-binding domain FDE89_RS06240 PF00175 Oxidoreductase NAD-binding domain FDE89_RS06245 PF02567 Phenazine biosynthesis-like protein FDE89_RS06250 PF00155 Aminotransferase class I and II FDE89_RS06250 PF00392 Bacterial regulatory proteins, gntR family FDE89_RS06255 PF16325 Peptidase family U32 C-terminal domain FDE89_RS06255 PF01136 Peptidase family U32 FDE89_RS06260 PF00037 4Fe-4S binding domain FDE89_RS06265 PF00893 Small Multidrug Resistance protein FDE89_RS06270 PF00005 ABC transporter FDE89_RS06275 PF00528 Binding-protein-dependent transport system inner membrane component FDE89_RS06280 PF00528 Binding-protein-dependent transport system inner membrane component FDE89_RS06285 PF00497 Bacterial extracellular solute-binding proteins, family 3 FDE89_RS06290 PF03466 LysR substrate binding domain FDE89_RS06290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDE89_RS06295 PF13533 Biotin-lipoyl like FDE89_RS06300 PF00873 AcrB/AcrD/AcrF family FDE89_RS06305 PF02321 Outer membrane efflux protein FDE89_RS06310 PF00464 Serine hydroxymethyltransferase FDE89_RS06340 PF00005 ABC transporter FDE89_RS06345 PF01061 ABC-2 type transporter FDE89_RS06350 PF14489 QueF-like protein FDE89_RS06350 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term FDE89_RS06360 PF01098 Cell cycle protein FDE89_RS06365 PF13406 Transglycosylase SLT domain FDE89_RS06370 PF05036 Sporulation related domain FDE89_RS06370 PF03330 Lytic transglycolase FDE89_RS06390 PF12833 Helix-turn-helix domain FDE89_RS06400 PF00889 Elongation factor TS FDE89_RS06405 PF00318 Ribosomal protein S2 FDE89_RS06420 PF07690 Major Facilitator Superfamily FDE89_RS06430 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FDE89_RS06430 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDE89_RS06435 PF04055 Radical SAM superfamily FDE89_RS06440 PF09317 Domain of unknown function (DUF1974) FDE89_RS06440 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDE89_RS06440 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDE89_RS06455 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain FDE89_RS06455 PF05221 S-adenosyl-L-homocysteine hydrolase FDE89_RS06460 PF02219 Methylenetetrahydrofolate reductase FDE89_RS06465 PF04452 RNA methyltransferase FDE89_RS06470 PF00563 EAL domain FDE89_RS06470 PF00990 Diguanylate cyclase, GGDEF domain FDE89_RS06470 PF03707 Bacterial signalling protein N terminal repeat FDE89_RS06475 PF00390 Malic enzyme, N-terminal domain FDE89_RS06475 PF03949 Malic enzyme, NAD binding domain FDE89_RS06475 PF01515 Phosphate acetyl/butaryl transferase FDE89_RS06480 PF12627 Probable RNA and SrmB- binding site of polymerase A FDE89_RS06480 PF01743 Poly A polymerase head domain FDE89_RS06485 PF13180 PDZ domain FDE89_RS06490 PF01784 NIF3 (NGG1p interacting factor 3) FDE89_RS06495 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FDE89_RS06495 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FDE89_RS06530 PF01040 UbiA prenyltransferase family FDE89_RS06535 PF04345 Chorismate lyase FDE89_RS06540 PF03951 Glutamine synthetase, beta-Grasp domain FDE89_RS06540 PF00120 Glutamine synthetase, catalytic domain FDE89_RS06545 PF00854 POT family FDE89_RS06555 PF00117 Glutamine amidotransferase class-I FDE89_RS06565 PF00593 TonB dependent receptor FDE89_RS06565 PF07715 TonB-dependent Receptor Plug Domain FDE89_RS06570 PF02885 Glycosyl transferase family, helical bundle domain FDE89_RS06570 PF00591 Glycosyl transferase family, a/b domain FDE89_RS06590 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FDE89_RS06590 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FDE89_RS06595 PF01799 [2Fe-2S] binding domain FDE89_RS06595 PF00111 2Fe-2S iron-sulfur cluster binding domain FDE89_RS06600 PF01227 GTP cyclohydrolase I FDE89_RS06630 PF05675 Protein of unknown function (DUF817) FDE89_RS06635 PF01208 Uroporphyrinogen decarboxylase (URO-D) FDE89_RS06645 PF00425 chorismate binding enzyme FDE89_RS06655 PF00975 Thioesterase domain FDE89_RS06660 PF00005 ABC transporter FDE89_RS06665 PF00005 ABC transporter FDE89_RS06675 PF00282 Pyridoxal-dependent decarboxylase conserved domain FDE89_RS06680 PF00550 Phosphopantetheine attachment site FDE89_RS06680 PF00857 Isochorismatase family FDE89_RS06685 PF13193 AMP-binding enzyme C-terminal domain FDE89_RS06685 PF00501 AMP-binding enzyme FDE89_RS06690 PF00668 Condensation domain FDE89_RS06690 PF00501 AMP-binding enzyme FDE89_RS06690 PF00550 Phosphopantetheine attachment site FDE89_RS06695 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) FDE89_RS06700 PF07715 TonB-dependent Receptor Plug Domain FDE89_RS06700 PF00593 TonB dependent receptor FDE89_RS06705 PF01497 Periplasmic binding protein FDE89_RS06710 PF00005 ABC transporter FDE89_RS06715 PF01032 FecCD transport family FDE89_RS06720 PF01032 FecCD transport family FDE89_RS06725 PF00550 Phosphopantetheine attachment site FDE89_RS06725 PF00668 Condensation domain FDE89_RS06725 PF13193 AMP-binding enzyme C-terminal domain FDE89_RS06725 PF00501 AMP-binding enzyme FDE89_RS06725 PF00975 Thioesterase domain FDE89_RS06730 PF00550 Phosphopantetheine attachment site FDE89_RS06730 PF00668 Condensation domain FDE89_RS06730 PF13193 AMP-binding enzyme C-terminal domain FDE89_RS06730 PF00501 AMP-binding enzyme FDE89_RS06740 PF13309 HTH domain FDE89_RS06740 PF08348 YheO-like PAS domain FDE89_RS06750 PF02678 Pirin FDE89_RS06750 PF17954 Quercetinase C-terminal cupin domain FDE89_RS06770 PF00440 Bacterial regulatory proteins, tetR family FDE89_RS06775 PF16197 Ketoacyl-synthetase C-terminal extension FDE89_RS06775 PF08240 Alcohol dehydrogenase GroES-like domain FDE89_RS06775 PF08990 Erythronolide synthase docking FDE89_RS06775 PF14765 Polyketide synthase dehydratase FDE89_RS06775 PF09277 Erythronolide synthase, docking FDE89_RS06775 PF00550 Phosphopantetheine attachment site FDE89_RS06775 PF08659 KR domain FDE89_RS06775 PF02801 Beta-ketoacyl synthase, C-terminal domain FDE89_RS06775 PF00109 Beta-ketoacyl synthase, N-terminal domain FDE89_RS06775 PF00698 Acyl transferase domain FDE89_RS06780 PF13378 Enolase C-terminal domain-like FDE89_RS06780 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FDE89_RS06785 PF00083 Sugar (and other) transporter FDE89_RS06790 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system FDE89_RS06830 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FDE89_RS06830 PF01266 FAD dependent oxidoreductase FDE89_RS06835 PF18113 Rubredoxin binding C-terminal domain FDE89_RS06835 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDE89_RS06840 PF00171 Aldehyde dehydrogenase family FDE89_RS06845 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FDE89_RS06845 PF00355 Rieske [2Fe-2S] domain FDE89_RS06850 PF02028 BCCT, betaine/carnitine/choline family transporter FDE89_RS06855 PF02028 BCCT, betaine/carnitine/choline family transporter FDE89_RS06860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDE89_RS06860 PF03466 LysR substrate binding domain FDE89_RS06865 PF00324 Amino acid permease FDE89_RS06870 PF00171 Aldehyde dehydrogenase family FDE89_RS06885 PF13556 PucR C-terminal helix-turn-helix domain FDE89_RS06885 PF17853 GGDEF-like domain FDE89_RS06885 PF06018 CodY GAF-like domain FDE89_RS06920 PF04328 Selenoprotein, putative FDE89_RS06925 PF02554 Carbon starvation protein CstA FDE89_RS06925 PF13722 5TM C-terminal transporter carbon starvation CstA FDE89_RS06930 PF09285 Elongation factor P, C-terminal FDE89_RS06930 PF08207 Elongation factor P (EF-P) KOW-like domain FDE89_RS06930 PF01132 Elongation factor P (EF-P) OB domain FDE89_RS06935 PF04055 Radical SAM superfamily FDE89_RS06950 PF01197 Ribosomal protein L31 FDE89_RS06955 PF13593 SBF-like CPA transporter family (DUF4137) FDE89_RS06960 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FDE89_RS06965 PF07690 Major Facilitator Superfamily FDE89_RS06970 PF05362 Lon protease (S16) C-terminal proteolytic domain FDE89_RS06970 PF13654 AAA domain FDE89_RS06975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDE89_RS06975 PF03466 LysR substrate binding domain FDE89_RS06980 PF01476 LysM domain FDE89_RS06980 PF01551 Peptidase family M23 FDE89_RS06985 PF01975 Survival protein SurE FDE89_RS07000 PF07943 Penicillin-binding protein 5, C-terminal domain FDE89_RS07000 PF00768 D-alanyl-D-alanine carboxypeptidase FDE89_RS07005 PF00132 Bacterial transferase hexapeptide (six repeats) FDE89_RS07010 PF00293 NUDIX domain FDE89_RS07010 PF13344 Haloacid dehalogenase-like hydrolase FDE89_RS07020 PF04356 Protein of unknown function (DUF489) FDE89_RS07025 PF00206 Lyase FDE89_RS07025 PF08328 Adenylosuccinate lyase C-terminal FDE89_RS07045 PF08496 Peptidase family S49 N-terminal FDE89_RS07045 PF01343 Peptidase family S49 FDE89_RS07050 PF00005 ABC transporter FDE89_RS07055 PF00528 Binding-protein-dependent transport system inner membrane component FDE89_RS07060 PF00528 Binding-protein-dependent transport system inner membrane component FDE89_RS07065 PF12849 PBP superfamily domain FDE89_RS07070 PF00324 Amino acid permease FDE89_RS07075 PF00205 Thiamine pyrophosphate enzyme, central domain FDE89_RS07075 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FDE89_RS07075 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FDE89_RS07080 PF01037 Lrp/AsnC ligand binding domain FDE89_RS07085 PF00171 Aldehyde dehydrogenase family FDE89_RS07090 PF00282 Pyridoxal-dependent decarboxylase conserved domain FDE89_RS07095 PF00202 Aminotransferase class-III FDE89_RS07105 PF17754 MftR C-terminal domain FDE89_RS07105 PF00440 Bacterial regulatory proteins, tetR family FDE89_RS07115 PF00487 Fatty acid desaturase FDE89_RS07120 PF00970 Oxidoreductase FAD-binding domain FDE89_RS07120 PF00111 2Fe-2S iron-sulfur cluster binding domain FDE89_RS07120 PF00175 Oxidoreductase NAD-binding domain FDE89_RS07125 PF00440 Bacterial regulatory proteins, tetR family FDE89_RS07135 PF00271 Helicase conserved C-terminal domain FDE89_RS07135 PF12137 RNA polymerase recycling family C-terminal FDE89_RS07135 PF00176 SNF2 family N-terminal domain FDE89_RS07135 PF18339 RapA N-terminal Tudor like domain 1 FDE89_RS07135 PF18337 RapA N-terminal Tudor like domain FDE89_RS07140 PF00849 RNA pseudouridylate synthase FDE89_RS07150 PF00202 Aminotransferase class-III FDE89_RS07155 PF02581 Thiamine monophosphate synthase FDE89_RS07180 PF00675 Insulinase (Peptidase family M16) FDE89_RS07180 PF05193 Peptidase M16 inactive domain FDE89_RS07185 PF02567 Phenazine biosynthesis-like protein FDE89_RS07190 PF00375 Sodium:dicarboxylate symporter family FDE89_RS07195 PF03466 LysR substrate binding domain FDE89_RS07195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDE89_RS07200 PF06779 Uncharacterised MFS-type transporter YbfB FDE89_RS07215 PF00180 Isocitrate/isopropylmalate dehydrogenase FDE89_RS07220 PF00849 RNA pseudouridylate synthase FDE89_RS07225 PF03971 Monomeric isocitrate dehydrogenase FDE89_RS07235 PF07943 Penicillin-binding protein 5, C-terminal domain FDE89_RS07235 PF00768 D-alanyl-D-alanine carboxypeptidase FDE89_RS07240 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDE89_RS07245 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FDE89_RS07250 PF00875 DNA photolyase FDE89_RS07250 PF03441 FAD binding domain of DNA photolyase FDE89_RS07280 PF02350 UDP-N-acetylglucosamine 2-epimerase FDE89_RS07295 PF03060 Nitronate monooxygenase FDE89_RS07305 PF07759 Protein of unknown function (DUF1615) FDE89_RS07315 PF01472 PUA domain FDE89_RS07315 PF00696 Amino acid kinase family FDE89_RS07320 PF01018 GTP1/OBG FDE89_RS07320 PF01926 50S ribosome-binding GTPase FDE89_RS07335 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FDE89_RS07335 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FDE89_RS07340 PF00892 EamA-like transporter family FDE89_RS07350 PF17757 UvrB interaction domain FDE89_RS07350 PF12344 Ultra-violet resistance protein B FDE89_RS07350 PF00271 Helicase conserved C-terminal domain FDE89_RS07350 PF04851 Type III restriction enzyme, res subunit FDE89_RS07350 PF02151 UvrB/uvrC motif FDE89_RS07360 PF17151 Periplasmic sensor domain FDE89_RS07360 PF00990 Diguanylate cyclase, GGDEF domain FDE89_RS07370 PF00155 Aminotransferase class I and II FDE89_RS07400 PF00106 short chain dehydrogenase FDE89_RS07405 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) FDE89_RS07410 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ FDE89_RS07415 PF02565 Recombination protein O C terminal FDE89_RS07415 PF11967 Recombination protein O N terminal FDE89_RS07425 PF07650 KH domain FDE89_RS07425 PF01926 50S ribosome-binding GTPase FDE89_RS07430 PF00035 Double-stranded RNA binding motif FDE89_RS07430 PF14622 Ribonuclease-III-like FDE89_RS07440 PF10502 Signal peptidase, peptidase S26 FDE89_RS07445 PF00009 Elongation factor Tu GTP binding domain FDE89_RS07445 PF03144 Elongation factor Tu domain 2 FDE89_RS07445 PF06421 GTP-binding protein LepA C-terminus FDE89_RS07445 PF00679 Elongation factor G C-terminus FDE89_RS07455 PF13180 PDZ domain FDE89_RS07460 PF00890 FAD binding domain FDE89_RS07460 PF02910 Fumarate reductase flavoprotein C-term FDE89_RS07470 PF02223 Thymidylate kinase FDE89_RS07475 PF02618 YceG-like family FDE89_RS07480 PF01063 Amino-transferase class IV FDE89_RS07495 PF00528 Binding-protein-dependent transport system inner membrane component FDE89_RS07500 PF00528 Binding-protein-dependent transport system inner membrane component FDE89_RS07505 PF12857 TOBE-like domain FDE89_RS07505 PF00005 ABC transporter FDE89_RS07510 PF03466 LysR substrate binding domain FDE89_RS07510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDE89_RS07520 PF00132 Bacterial transferase hexapeptide (six repeats) FDE89_RS07520 PF14602 Hexapeptide repeat of succinyl-transferase FDE89_RS07520 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal FDE89_RS07530 PF06508 Queuosine biosynthesis protein QueC FDE89_RS07545 PF00578 AhpC/TSA family FDE89_RS07555 PF00293 NUDIX domain FDE89_RS07555 PF01467 Cytidylyltransferase-like FDE89_RS07560 PF00378 Enoyl-CoA hydratase/isomerase FDE89_RS07565 PF01784 NIF3 (NGG1p interacting factor 3) FDE89_RS07570 PF07690 Major Facilitator Superfamily FDE89_RS07575 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal FDE89_RS07575 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FDE89_RS07575 PF02769 AIR synthase related protein, C-terminal domain FDE89_RS07580 PF01966 HD domain FDE89_RS07585 PF01330 RuvA N terminal domain FDE89_RS07585 PF07499 RuvA, C-terminal domain FDE89_RS07590 PF05491 RuvB C-terminal winged helix domain FDE89_RS07590 PF17864 RuvB AAA lid domain FDE89_RS07590 PF05496 Holliday junction DNA helicase RuvB P-loop domain FDE89_RS07595 PF07687 Peptidase dimerisation domain FDE89_RS07595 PF01546 Peptidase family M20/M25/M40 FDE89_RS07600 PF03061 Thioesterase superfamily FDE89_RS07605 PF01618 MotA/TolQ/ExbB proton channel family FDE89_RS07610 PF02472 Biopolymer transport protein ExbD/TolR FDE89_RS07620 PF07676 WD40-like Beta Propeller Repeat FDE89_RS07620 PF04052 TolB amino-terminal domain FDE89_RS07625 PF00691 OmpA family FDE89_RS07635 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain FDE89_RS07640 PF08032 RNA 2'-O ribose methyltransferase substrate binding FDE89_RS07640 PF00588 SpoU rRNA Methylase family FDE89_RS07670 PF11638 DnaA N-terminal domain FDE89_RS07670 PF08299 Bacterial dnaA protein helix-turn-helix FDE89_RS07670 PF00308 Bacterial dnaA protein FDE89_RS07675 PF01594 AI-2E family transporter FDE89_RS07680 PF00586 AIR synthase related protein, N-terminal domain FDE89_RS07680 PF02769 AIR synthase related protein, C-terminal domain FDE89_RS07685 PF00551 Formyl transferase FDE89_RS07690 PF12697 Alpha/beta hydrolase family FDE89_RS07695 PF06965 Na+/H+ antiporter 1 FDE89_RS07695 PF01343 Peptidase family S49 FDE89_RS07705 PF00753 Metallo-beta-lactamase superfamily FDE89_RS07705 PF03772 Competence protein FDE89_RS07705 PF13567 Domain of unknown function (DUF4131) FDE89_RS07710 PF00005 ABC transporter FDE89_RS07715 PF02687 FtsX-like permease family FDE89_RS07715 PF12704 MacB-like periplasmic core domain FDE89_RS07725 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 FDE89_RS07735 PF00266 Aminotransferase class-V FDE89_RS07745 PF13533 Biotin-lipoyl like FDE89_RS07765 PF00535 Glycosyl transferase family 2 FDE89_RS07780 PF03989 DNA gyrase C-terminal domain, beta-propeller FDE89_RS07780 PF00521 DNA gyrase/topoisomerase IV, subunit A FDE89_RS07785 PF00766 Electron transfer flavoprotein FAD-binding domain FDE89_RS07785 PF01012 Electron transfer flavoprotein domain FDE89_RS07790 PF01012 Electron transfer flavoprotein domain FDE89_RS07795 PF00589 Phage integrase family FDE89_RS07795 PF02899 Phage integrase, N-terminal SAM-like domain FDE89_RS07800 PF01810 LysE type translocator FDE89_RS07805 PF01678 Diaminopimelate epimerase FDE89_RS07810 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FDE89_RS07810 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FDE89_RS07820 PF00324 Amino acid permease FDE89_RS07825 PF18073 Rubredoxin metal binding domain FDE89_RS07835 PF00152 tRNA synthetases class II (D, K and N) FDE89_RS07840 PF11890 Domain of unknown function (DUF3410) FDE89_RS07840 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FDE89_RS07840 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FDE89_RS07845 PF06803 Protein of unknown function (DUF1232) FDE89_RS07850 PF02634 FdhD/NarQ family FDE89_RS07855 PF00384 Molybdopterin oxidoreductase FDE89_RS07860 PF02595 Glycerate kinase family FDE89_RS07875 PF00881 Nitroreductase family FDE89_RS07900 PF13193 AMP-binding enzyme C-terminal domain FDE89_RS07900 PF00668 Condensation domain FDE89_RS07900 PF00550 Phosphopantetheine attachment site FDE89_RS07900 PF00501 AMP-binding enzyme FDE89_RS07900 PF00975 Thioesterase domain FDE89_RS07915 PF03449 Transcription elongation factor, N-terminal FDE89_RS07915 PF01272 Transcription elongation factor, GreA/GreB, C-term FDE89_RS07920 PF01464 Transglycosylase SLT domain FDE89_RS07920 PF00497 Bacterial extracellular solute-binding proteins, family 3 FDE89_RS07930 PF01171 PP-loop family FDE89_RS07940 PF01464 Transglycosylase SLT domain FDE89_RS07945 PF01435 Peptidase family M48 FDE89_RS07955 PF00873 AcrB/AcrD/AcrF family FDE89_RS07960 PF03009 Glycerophosphoryl diester phosphodiesterase family FDE89_RS07970 PF01219 Prokaryotic diacylglycerol kinase FDE89_RS07975 PF00118 TCP-1/cpn60 chaperonin family FDE89_RS07980 PF00166 Chaperonin 10 Kd subunit FDE89_RS07990 PF00149 Calcineurin-like phosphoesterase FDE89_RS07995 PF00781 Diacylglycerol kinase catalytic domain FDE89_RS08000 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain FDE89_RS08000 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain FDE89_RS08005 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FDE89_RS08005 PF01266 FAD dependent oxidoreductase FDE89_RS08010 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FDE89_RS08010 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FDE89_RS08015 PF00083 Sugar (and other) transporter FDE89_RS08030 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FDE89_RS08030 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FDE89_RS08045 PF09423 PhoD-like phosphatase FDE89_RS08045 PF16655 PhoD-like phosphatase, N-terminal domain FDE89_RS08065 PF00809 Pterin binding enzyme FDE89_RS08070 PF00004 ATPase family associated with various cellular activities (AAA) FDE89_RS08070 PF17862 AAA+ lid domain FDE89_RS08070 PF01434 Peptidase family M41 FDE89_RS08070 PF06480 FtsH Extracellular FDE89_RS08075 PF01728 FtsJ-like methyltransferase FDE89_RS08080 PF01985 CRS1 / YhbY (CRM) domain FDE89_RS08095 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FDE89_RS08095 PF00117 Glutamine amidotransferase class-I FDE89_RS08100 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FDE89_RS08100 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FDE89_RS08100 PF02142 MGS-like domain FDE89_RS08105 PF01272 Transcription elongation factor, GreA/GreB, C-term FDE89_RS08105 PF03449 Transcription elongation factor, N-terminal FDE89_RS08110 PF00132 Bacterial transferase hexapeptide (six repeats) FDE89_RS08115 PF00582 Universal stress protein family FDE89_RS08120 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FDE89_RS08130 PF09587 Bacterial capsule synthesis protein PGA_cap FDE89_RS08180 PF00999 Sodium/hydrogen exchanger family FDE89_RS08185 PF04228 Putative neutral zinc metallopeptidase FDE89_RS08190 PF05661 Protein of unknown function (DUF808) FDE89_RS08195 PF00579 tRNA synthetases class I (W and Y) FDE89_RS08200 PF00549 CoA-ligase FDE89_RS08200 PF02629 CoA binding domain FDE89_RS08205 PF00549 CoA-ligase FDE89_RS08205 PF08442 ATP-grasp domain FDE89_RS08210 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDE89_RS08210 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FDE89_RS08215 PF00364 Biotin-requiring enzyme FDE89_RS08215 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FDE89_RS08215 PF02817 e3 binding domain FDE89_RS08220 PF00676 Dehydrogenase E1 component FDE89_RS08220 PF16078 2-oxoglutarate dehydrogenase N-terminus FDE89_RS08220 PF02779 Transketolase, pyrimidine binding domain FDE89_RS08220 PF16870 2-oxoglutarate dehydrogenase C-terminal FDE89_RS08235 PF13085 2Fe-2S iron-sulfur cluster binding domain FDE89_RS08245 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FDE89_RS08250 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FDE89_RS08255 PF00285 Citrate synthase, C-terminal domain FDE89_RS08265 PF17773 UPF0176 acylphosphatase like domain FDE89_RS08265 PF00581 Rhodanese-like domain FDE89_RS08285 PF04545 Sigma-70, region 4 FDE89_RS08285 PF04546 Sigma-70, non-essential region FDE89_RS08285 PF03979 Sigma-70 factor, region 1.1 FDE89_RS08285 PF00140 Sigma-70 factor, region 1.2 FDE89_RS08285 PF04542 Sigma-70 region 2 FDE89_RS08285 PF04539 Sigma-70 region 3 FDE89_RS08290 PF04359 Protein of unknown function (DUF493) FDE89_RS08295 PF03099 Biotin/lipoate A/B protein ligase family FDE89_RS08305 PF00465 Iron-containing alcohol dehydrogenase FDE89_RS08310 PF13520 Amino acid permease FDE89_RS08315 PF03358 NADPH-dependent FMN reductase FDE89_RS08325 PF00588 SpoU rRNA Methylase family FDE89_RS08330 PF14824 Sirohaem biosynthesis protein central FDE89_RS08330 PF10414 Sirohaem synthase dimerisation region FDE89_RS08330 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FDE89_RS08335 PF02403 Seryl-tRNA synthetase N-terminal domain FDE89_RS08335 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FDE89_RS08345 PF03548 Outer membrane lipoprotein carrier protein LolA FDE89_RS08350 PF01016 Ribosomal L27 protein FDE89_RS08355 PF00829 Ribosomal prokaryotic L21 protein FDE89_RS08365 PF00348 Polyprenyl synthetase FDE89_RS08375 PF01569 PAP2 superfamily FDE89_RS08380 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDE89_RS08380 PF00529 HlyD membrane-fusion protein of T1SS FDE89_RS08385 PF00873 AcrB/AcrD/AcrF family FDE89_RS08390 PF02321 Outer membrane efflux protein FDE89_RS08395 PF01906 Putative heavy-metal-binding FDE89_RS08400 PF01906 Putative heavy-metal-binding FDE89_RS08420 PF10458 Valyl tRNA synthetase tRNA binding arm FDE89_RS08420 PF00133 tRNA synthetases class I (I, L, M and V) FDE89_RS08420 PF08264 Anticodon-binding domain of tRNA FDE89_RS08440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDE89_RS08440 PF03466 LysR substrate binding domain FDE89_RS08450 PF00909 Ammonium Transporter Family FDE89_RS08460 PF08521 Two-component sensor kinase N-terminal FDE89_RS08460 PF00512 His Kinase A (phospho-acceptor) domain FDE89_RS08460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDE89_RS08465 PF00486 Transcriptional regulatory protein, C terminal FDE89_RS08465 PF00072 Response regulator receiver domain FDE89_RS08490 PF01734 Patatin-like phospholipase FDE89_RS08500 PF01145 SPFH domain / Band 7 family FDE89_RS08505 PF04237 YjbR FDE89_RS08510 PF00348 Polyprenyl synthetase FDE89_RS08515 PF04303 PrpF protein FDE89_RS08520 PF00324 Amino acid permease FDE89_RS08530 PF01965 DJ-1/PfpI family FDE89_RS08535 PF09277 Erythronolide synthase, docking FDE89_RS08535 PF08990 Erythronolide synthase docking FDE89_RS08535 PF16197 Ketoacyl-synthetase C-terminal extension FDE89_RS08535 PF00109 Beta-ketoacyl synthase, N-terminal domain FDE89_RS08535 PF00698 Acyl transferase domain FDE89_RS08535 PF08240 Alcohol dehydrogenase GroES-like domain FDE89_RS08535 PF08659 KR domain FDE89_RS08535 PF00550 Phosphopantetheine attachment site FDE89_RS08535 PF14765 Polyketide synthase dehydratase FDE89_RS08535 PF02801 Beta-ketoacyl synthase, C-terminal domain FDE89_RS08540 PF12833 Helix-turn-helix domain FDE89_RS08540 PF06719 AraC-type transcriptional regulator N-terminus FDE89_RS08545 PF02673 Bacitracin resistance protein BacA FDE89_RS08565 PF02525 Flavodoxin-like fold FDE89_RS08580 PF01507 Phosphoadenosine phosphosulfate reductase family FDE89_RS08585 PF06974 Protein of unknown function (DUF1298) FDE89_RS08585 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain FDE89_RS08595 PF00575 S1 RNA binding domain FDE89_RS08595 PF10150 Ribonuclease E/G family FDE89_RS08600 PF02545 Maf-like protein FDE89_RS08605 PF04093 rod shape-determining protein MreD FDE89_RS08610 PF04085 rod shape-determining protein MreC FDE89_RS08620 PF02686 Glu-tRNAGln amidotransferase C subunit FDE89_RS08625 PF01425 Amidase FDE89_RS08630 PF02637 GatB domain FDE89_RS08630 PF02934 GatB/GatE catalytic domain FDE89_RS08670 PF05992 SbmA/BacA-like family FDE89_RS08675 PF13291 ACT domain FDE89_RS08675 PF00291 Pyridoxal-phosphate dependent enzyme FDE89_RS08680 PF01734 Patatin-like phospholipase FDE89_RS08685 PF01235 Sodium:alanine symporter family FDE89_RS08700 PF00881 Nitroreductase family FDE89_RS08705 PF07690 Major Facilitator Superfamily FDE89_RS08710 PF12805 FUSC-like inner membrane protein yccS FDE89_RS08720 PF00175 Oxidoreductase NAD-binding domain FDE89_RS08720 PF00667 FAD binding domain FDE89_RS08720 PF00258 Flavodoxin FDE89_RS08760 PF17969 L,D-transpeptidase C-terminal domain FDE89_RS08760 PF03734 L,D-transpeptidase catalytic domain FDE89_RS08765 PF04304 Protein of unknown function (DUF454) FDE89_RS08775 PF08085 Entericidin EcnA/B family FDE89_RS08780 PF01546 Peptidase family M20/M25/M40 FDE89_RS08780 PF07687 Peptidase dimerisation domain FDE89_RS08790 PF01584 CheW-like domain FDE89_RS08790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDE89_RS08790 PF00072 Response regulator receiver domain FDE89_RS08790 PF01627 Hpt domain FDE89_RS08795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDE89_RS08795 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term FDE89_RS08800 PF01584 CheW-like domain FDE89_RS08805 PF00072 Response regulator receiver domain FDE89_RS08810 PF00072 Response regulator receiver domain FDE89_RS08830 PF04073 Aminoacyl-tRNA editing domain FDE89_RS08830 PF03129 Anticodon binding domain FDE89_RS08830 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FDE89_RS08835 PF07411 Domain of unknown function (DUF1508) FDE89_RS08840 PF03831 PhnA domain FDE89_RS08840 PF08274 PhnA Zinc-Ribbon FDE89_RS08845 PF04343 Protein of unknown function, DUF488 FDE89_RS08855 PF01571 Aminomethyltransferase folate-binding domain FDE89_RS08860 PF10411 Disulfide bond isomerase protein N-terminus FDE89_RS08860 PF13098 Thioredoxin-like domain FDE89_RS08870 PF03547 Membrane transport protein FDE89_RS08875 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FDE89_RS08890 PF07715 TonB-dependent Receptor Plug Domain FDE89_RS08890 PF00593 TonB dependent receptor FDE89_RS08895 PF02245 Methylpurine-DNA glycosylase (MPG) FDE89_RS08900 PF06827 Zinc finger found in FPG and IleRS FDE89_RS08900 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FDE89_RS08900 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FDE89_RS08915 PF01741 Large-conductance mechanosensitive channel, MscL FDE89_RS08920 PF00679 Elongation factor G C-terminus FDE89_RS08920 PF00009 Elongation factor Tu GTP binding domain FDE89_RS08920 PF03144 Elongation factor Tu domain 2 FDE89_RS08925 PF00860 Permease family FDE89_RS08930 PF05175 Methyltransferase small domain FDE89_RS08930 PF08468 Methyltransferase small domain N-terminal FDE89_RS08935 PF00324 Amino acid permease FDE89_RS08940 PF01139 tRNA-splicing ligase RtcB FDE89_RS08945 PF00691 OmpA family FDE89_RS08945 PF13505 Outer membrane protein beta-barrel domain FDE89_RS08955 PF02803 Thiolase, C-terminal domain FDE89_RS08955 PF00108 Thiolase, N-terminal domain FDE89_RS08965 PF00893 Small Multidrug Resistance protein FDE89_RS08975 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FDE89_RS08975 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FDE89_RS08980 PF01011 PQQ enzyme repeat FDE89_RS08985 PF04966 Carbohydrate-selective porin, OprB family FDE89_RS08990 PF02515 CoA-transferase family III FDE89_RS08995 PF12833 Helix-turn-helix domain FDE89_RS08995 PF02311 AraC-like ligand binding domain FDE89_RS09000 PF02803 Thiolase, C-terminal domain FDE89_RS09000 PF00108 Thiolase, N-terminal domain FDE89_RS09005 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FDE89_RS09005 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FDE89_RS09005 PF00378 Enoyl-CoA hydratase/isomerase FDE89_RS09030 PF03006 Haemolysin-III related FDE89_RS09035 PF07690 Major Facilitator Superfamily FDE89_RS09035 PF00083 Sugar (and other) transporter FDE89_RS09045 PF07517 SecA DEAD-like domain FDE89_RS09045 PF07516 SecA Wing and Scaffold domain FDE89_RS09045 PF01043 SecA preprotein cross-linking domain FDE89_RS09045 PF02810 SEC-C motif FDE89_RS09050 PF00578 AhpC/TSA family FDE89_RS09050 PF10417 C-terminal domain of 1-Cys peroxiredoxin FDE89_RS09055 PF00753 Metallo-beta-lactamase superfamily FDE89_RS09070 PF02875 Mur ligase family, glutamate ligase domain FDE89_RS09070 PF08245 Mur ligase middle domain FDE89_RS09075 PF01039 Carboxyl transferase domain FDE89_RS09080 PF00290 Tryptophan synthase alpha chain FDE89_RS09105 PF00291 Pyridoxal-phosphate dependent enzyme FDE89_RS09110 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FDE89_RS09115 PF07715 TonB-dependent Receptor Plug Domain FDE89_RS09115 PF00593 TonB dependent receptor FDE89_RS09120 PF01923 Cobalamin adenosyltransferase FDE89_RS09140 PF02696 Uncharacterized ACR, YdiU/UPF0061 family FDE89_RS09145 PF00486 Transcriptional regulatory protein, C terminal FDE89_RS09145 PF00072 Response regulator receiver domain FDE89_RS09150 PF00672 HAMP domain FDE89_RS09150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDE89_RS09150 PF00512 His Kinase A (phospho-acceptor) domain FDE89_RS09160 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDE89_RS09160 PF02770 Acyl-CoA dehydrogenase, middle domain FDE89_RS09160 PF12806 Acetyl-CoA dehydrogenase C-terminal like FDE89_RS09160 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDE89_RS09165 PF02770 Acyl-CoA dehydrogenase, middle domain FDE89_RS09165 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDE89_RS09165 PF12806 Acetyl-CoA dehydrogenase C-terminal like FDE89_RS09165 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDE89_RS09170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDE89_RS09170 PF03466 LysR substrate binding domain FDE89_RS09175 PF02798 Glutathione S-transferase, N-terminal domain FDE89_RS09175 PF00043 Glutathione S-transferase, C-terminal domain FDE89_RS09180 PF06146 Phosphate-starvation-inducible E FDE89_RS09200 PF07715 TonB-dependent Receptor Plug Domain FDE89_RS09200 PF00593 TonB dependent receptor FDE89_RS09210 PF02938 GAD domain FDE89_RS09210 PF00152 tRNA synthetases class II (D, K and N) FDE89_RS09210 PF01336 OB-fold nucleic acid binding domain FDE89_RS09215 PF17102 Stealth protein CR3, conserved region 3 FDE89_RS09215 PF17101 Stealth protein CR1, conserved region 1 FDE89_RS09215 PF11380 Stealth protein CR2, conserved region 2 FDE89_RS09240 PF00534 Glycosyl transferases group 1 FDE89_RS09240 PF13439 Glycosyltransferase Family 4 FDE89_RS09245 PF00535 Glycosyl transferase family 2 FDE89_RS09250 PF01522 Polysaccharide deacetylase FDE89_RS09265 PF01063 Amino-transferase class IV FDE89_RS09270 PF08335 GlnD PII-uridylyltransferase FDE89_RS09270 PF03710 Glutamate-ammonia ligase adenylyltransferase FDE89_RS09275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDE89_RS09275 PF00512 His Kinase A (phospho-acceptor) domain FDE89_RS09275 PF07689 KaiB domain FDE89_RS09285 PF02547 Queuosine biosynthesis protein FDE89_RS09300 PF01702 Queuine tRNA-ribosyltransferase FDE89_RS09305 PF02699 Preprotein translocase subunit FDE89_RS09310 PF13721 SecD export protein N-terminal TM region FDE89_RS09310 PF02355 Protein export membrane protein FDE89_RS09310 PF07549 SecD/SecF GG Motif FDE89_RS09315 PF02355 Protein export membrane protein FDE89_RS09315 PF07549 SecD/SecF GG Motif FDE89_RS09320 PF02441 Flavoprotein FDE89_RS09320 PF04127 DNA / pantothenate metabolism flavoprotein FDE89_RS09325 PF04002 RadC-like JAB domain FDE89_RS09330 PF01062 Bestrophin, RFP-TM, chloride channel FDE89_RS09335 PF02811 PHP domain FDE89_RS09340 PF04279 Intracellular septation protein A FDE89_RS09345 PF03795 YCII-related domain FDE89_RS09355 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FDE89_RS09355 PF01266 FAD dependent oxidoreductase FDE89_RS09365 PF04461 Protein of unknown function (DUF520) FDE89_RS09375 PF03061 Thioesterase superfamily FDE89_RS09380 PF00085 Thioredoxin FDE89_RS09385 PF00561 alpha/beta hydrolase fold FDE89_RS09390 PF00753 Metallo-beta-lactamase superfamily FDE89_RS09390 PF04273 Putative phosphatase (DUF442) FDE89_RS09400 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDE89_RS09400 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FDE89_RS09435 PF17152 Periplasmic sensor domain FDE89_RS09435 PF00990 Diguanylate cyclase, GGDEF domain FDE89_RS09440 PF00691 OmpA family FDE89_RS09440 PF01389 OmpA-like transmembrane domain FDE89_RS09445 PF00149 Calcineurin-like phosphoesterase FDE89_RS09445 PF10518 TAT (twin-arginine translocation) pathway signal sequence FDE89_RS09450 PF13091 PLD-like domain FDE89_RS09460 PF13167 GTP-binding GTPase N-terminal FDE89_RS09460 PF01926 50S ribosome-binding GTPase FDE89_RS09460 PF16360 GTP-binding GTPase Middle Region FDE89_RS09480 PF00149 Calcineurin-like phosphoesterase FDE89_RS09485 PF00398 Ribosomal RNA adenine dimethylase FDE89_RS09490 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FDE89_RS09495 PF00572 Ribosomal protein L13 FDE89_RS09500 PF00380 Ribosomal protein S9/S16 FDE89_RS09505 PF00043 Glutathione S-transferase, C-terminal domain FDE89_RS09505 PF13417 Glutathione S-transferase, N-terminal domain FDE89_RS09510 PF04386 Stringent starvation protein B FDE89_RS09520 PF02785 Biotin carboxylase C-terminal domain FDE89_RS09520 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FDE89_RS09520 PF00289 Biotin carboxylase, N-terminal domain FDE89_RS09520 PF00364 Biotin-requiring enzyme FDE89_RS09530 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDE89_RS09530 PF02770 Acyl-CoA dehydrogenase, middle domain FDE89_RS09530 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDE89_RS09535 PF01039 Carboxyl transferase domain FDE89_RS09550 PF00440 Bacterial regulatory proteins, tetR family FDE89_RS09550 PF17932 Tetracyclin repressor-like, C-terminal domain FDE89_RS09555 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDE89_RS09555 PF02770 Acyl-CoA dehydrogenase, middle domain FDE89_RS09555 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDE89_RS09595 PF01066 CDP-alcohol phosphatidyltransferase FDE89_RS09600 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ FDE89_RS09620 PF00056 lactate/malate dehydrogenase, NAD binding domain FDE89_RS09620 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FDE89_RS09630 PF01551 Peptidase family M23 FDE89_RS09630 PF01464 Transglycosylase SLT domain FDE89_RS09630 PF10145 Phage-related minor tail protein FDE89_RS09635 PF04055 Radical SAM superfamily FDE89_RS09635 PF01938 TRAM domain FDE89_RS09635 PF00919 Uncharacterized protein family UPF0004 FDE89_RS09670 PF03358 NADPH-dependent FMN reductase FDE89_RS09680 PF00892 EamA-like transporter family FDE89_RS09685 PF12833 Helix-turn-helix domain FDE89_RS09690 PF01557 Fumarylacetoacetate (FAA) hydrolase family FDE89_RS09735 PF00773 RNB domain FDE89_RS09735 PF08206 Ribonuclease B OB domain FDE89_RS09735 PF00575 S1 RNA binding domain FDE89_RS09735 PF08461 Ribonuclease R winged-helix domain FDE89_RS09735 PF17876 Cold shock domain FDE89_RS09740 PF01432 Peptidase family M3 FDE89_RS09745 PF09526 Probable metal-binding protein (DUF2387) FDE89_RS09775 PF03937 Flavinator of succinate dehydrogenase FDE89_RS09780 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDE89_RS09780 PF02770 Acyl-CoA dehydrogenase, middle domain FDE89_RS09780 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDE89_RS09785 PF00743 Flavin-binding monooxygenase-like FDE89_RS09790 PF01196 Ribosomal protein L17 FDE89_RS09795 PF01000 RNA polymerase Rpb3/RpoA insert domain FDE89_RS09795 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FDE89_RS09795 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FDE89_RS09800 PF00163 Ribosomal protein S4/S9 N-terminal domain FDE89_RS09800 PF01479 S4 domain FDE89_RS09805 PF00411 Ribosomal protein S11 FDE89_RS09810 PF00416 Ribosomal protein S13/S18 FDE89_RS09815 PF00444 Ribosomal protein L36 FDE89_RS09820 PF00344 SecY translocase FDE89_RS09825 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FDE89_RS09830 PF00327 Ribosomal protein L30p/L7e FDE89_RS09835 PF03719 Ribosomal protein S5, C-terminal domain FDE89_RS09835 PF00333 Ribosomal protein S5, N-terminal domain FDE89_RS09840 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FDE89_RS09845 PF00347 Ribosomal protein L6 FDE89_RS09850 PF00410 Ribosomal protein S8 FDE89_RS09855 PF00253 Ribosomal protein S14p/S29e FDE89_RS09860 PF00673 ribosomal L5P family C-terminus FDE89_RS09860 PF00281 Ribosomal protein L5 FDE89_RS09865 PF00467 KOW motif FDE89_RS09865 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FDE89_RS09870 PF00238 Ribosomal protein L14p/L23e FDE89_RS09875 PF00366 Ribosomal protein S17 FDE89_RS09880 PF00831 Ribosomal L29 protein FDE89_RS09885 PF00252 Ribosomal protein L16p/L10e FDE89_RS09890 PF00189 Ribosomal protein S3, C-terminal domain FDE89_RS09890 PF07650 KH domain FDE89_RS09895 PF00237 Ribosomal protein L22p/L17e FDE89_RS09900 PF00203 Ribosomal protein S19 FDE89_RS09905 PF03947 Ribosomal Proteins L2, C-terminal domain FDE89_RS09905 PF00181 Ribosomal Proteins L2, RNA binding domain FDE89_RS09910 PF00276 Ribosomal protein L23 FDE89_RS09915 PF00573 Ribosomal protein L4/L1 family FDE89_RS09920 PF00297 Ribosomal protein L3 FDE89_RS09925 PF00338 Ribosomal protein S10p/S20e FDE89_RS09930 PF00117 Glutamine amidotransferase class-I FDE89_RS09935 PF01053 Cys/Met metabolism PLP-dependent enzyme FDE89_RS09940 PF05872 Bacterial protein of unknown function (DUF853) FDE89_RS09945 PF00042 Globin FDE89_RS09945 PF00175 Oxidoreductase NAD-binding domain FDE89_RS09945 PF00970 Oxidoreductase FAD-binding domain FDE89_RS09950 PF02082 Transcriptional regulator FDE89_RS09955 PF01926 50S ribosome-binding GTPase FDE89_RS09965 PF00375 Sodium:dicarboxylate symporter family FDE89_RS09975 PF01553 Acyltransferase FDE89_RS09990 PF00271 Helicase conserved C-terminal domain FDE89_RS09990 PF00270 DEAD/DEAH box helicase FDE89_RS09990 PF17191 RecG wedge domain FDE89_RS10000 PF13737 Transposase DDE domain FDE89_RS10010 PF00293 NUDIX domain FDE89_RS10015 PF03641 Possible lysine decarboxylase FDE89_RS10020 PF01544 CorA-like Mg2+ transporter protein FDE89_RS10030 PF05494 MlaC protein FDE89_RS10040 PF02405 Permease MlaE FDE89_RS10045 PF00005 ABC transporter FDE89_RS10055 PF00270 DEAD/DEAH box helicase FDE89_RS10055 PF03880 DbpA RNA binding domain FDE89_RS10055 PF00271 Helicase conserved C-terminal domain FDE89_RS10055 PF12343 Cold shock protein DEAD box A FDE89_RS10060 PF00459 Inositol monophosphatase family FDE89_RS10065 PF02780 Transketolase, C-terminal domain FDE89_RS10065 PF02779 Transketolase, pyrimidine binding domain FDE89_RS10065 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FDE89_RS10070 PF00925 GTP cyclohydrolase II FDE89_RS10075 PF01218 Coproporphyrinogen III oxidase FDE89_RS10080 PF08501 Shikimate dehydrogenase substrate binding domain FDE89_RS10080 PF01488 Shikimate / quinate 5-dehydrogenase FDE89_RS10080 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FDE89_RS10090 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDE89_RS10090 PF02770 Acyl-CoA dehydrogenase, middle domain FDE89_RS10090 PF12806 Acetyl-CoA dehydrogenase C-terminal like FDE89_RS10090 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDE89_RS10100 PF04024 PspC domain FDE89_RS10105 PF00571 CBS domain FDE89_RS10130 PF02091 Glycyl-tRNA synthetase alpha subunit FDE89_RS10135 PF02092 Glycyl-tRNA synthetase beta subunit FDE89_RS10135 PF05746 DALR anticodon binding domain FDE89_RS10145 PF00892 EamA-like transporter family FDE89_RS10150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDE89_RS10150 PF03466 LysR substrate binding domain FDE89_RS10180 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family FDE89_RS10185 PF04996 Succinylarginine dihydrolase FDE89_RS10190 PF00171 Aldehyde dehydrogenase family FDE89_RS10195 PF04958 Arginine N-succinyltransferase beta subunit FDE89_RS10200 PF00202 Aminotransferase class-III FDE89_RS10205 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FDE89_RS10205 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FDE89_RS10210 PF00324 Amino acid permease FDE89_RS10240 PF13614 AAA domain FDE89_RS10245 PF01594 AI-2E family transporter FDE89_RS10255 PF12805 FUSC-like inner membrane protein yccS FDE89_RS10260 PF07690 Major Facilitator Superfamily FDE89_RS10270 PF02525 Flavodoxin-like fold FDE89_RS10275 PF03992 Antibiotic biosynthesis monooxygenase FDE89_RS10285 PF02913 FAD linked oxidases, C-terminal domain FDE89_RS10285 PF01565 FAD binding domain FDE89_RS10290 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FDE89_RS10290 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FDE89_RS10300 PF00892 EamA-like transporter family FDE89_RS10315 PF09157 Pseudouridine synthase II TruB, C-terminal FDE89_RS10315 PF16198 tRNA pseudouridylate synthase B C-terminal domain FDE89_RS10315 PF01509 TruB family pseudouridylate synthase (N terminal domain) FDE89_RS10320 PF03280 Proteobacterial lipase chaperone protein FDE89_RS10325 PF00561 alpha/beta hydrolase fold FDE89_RS10330 PF01245 Ribosomal protein L19 FDE89_RS10335 PF01746 tRNA (Guanine-1)-methyltransferase FDE89_RS10340 PF01782 RimM N-terminal domain FDE89_RS10340 PF05239 PRC-barrel domain FDE89_RS10385 PF02401 LytB protein FDE89_RS10390 PF00625 Guanylate kinase FDE89_RS10395 PF01192 RNA polymerase Rpb6 FDE89_RS10405 PF02824 TGS domain FDE89_RS10405 PF13291 ACT domain FDE89_RS10405 PF04607 Region found in RelA / SpoT proteins FDE89_RS10410 PF01042 Endoribonuclease L-PSP FDE89_RS10415 PF04324 BFD-like [2Fe-2S] binding domain FDE89_RS10420 PF00210 Ferritin-like domain FDE89_RS10425 PF15864 Protein glycosylation ligase FDE89_RS10425 PF04932 O-Antigen ligase FDE89_RS10425 PF11846 Virulence factor membrane-bound polymerase, C-terminal FDE89_RS10475 PF04536 TPM domain FDE89_RS10480 PF04011 LemA family FDE89_RS10490 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDE89_RS10490 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FDE89_RS10495 PF04898 Glutamate synthase central domain FDE89_RS10495 PF01493 GXGXG motif FDE89_RS10495 PF01645 Conserved region in glutamate synthase FDE89_RS10495 PF00310 Glutamine amidotransferases class-II FDE89_RS10510 PF01202 Shikimate kinase FDE89_RS10515 PF00263 Bacterial type II and III secretion system protein FDE89_RS10515 PF11741 AMIN domain FDE89_RS10515 PF03958 Bacterial type II/III secretion system short domain FDE89_RS10515 PF07660 Secretin and TonB N terminus short domain FDE89_RS10525 PF04350 Pilus assembly protein, PilO FDE89_RS10530 PF05137 Fimbrial assembly protein (PilN) FDE89_RS10535 PF11104 Type IV pilus assembly protein PilM; FDE89_RS10540 PF00905 Penicillin binding protein transpeptidase domain FDE89_RS10540 PF00912 Transglycosylase FDE89_RS10540 PF17092 Penicillin-binding protein OB-like domain FDE89_RS10545 PF13847 Methyltransferase domain FDE89_RS10555 PF00953 Glycosyl transferase family 4 FDE89_RS10560 PF01225 Mur ligase family, catalytic domain FDE89_RS10560 PF08245 Mur ligase middle domain FDE89_RS10560 PF02875 Mur ligase family, glutamate ligase domain FDE89_RS10565 PF08245 Mur ligase middle domain FDE89_RS10565 PF02875 Mur ligase family, glutamate ligase domain FDE89_RS10565 PF01225 Mur ligase family, catalytic domain FDE89_RS10570 PF00905 Penicillin binding protein transpeptidase domain FDE89_RS10570 PF03717 Penicillin-binding Protein dimerisation domain FDE89_RS10580 PF01795 MraW methylase family FDE89_RS10595 PF00749 tRNA synthetases class I (E and Q), catalytic domain FDE89_RS10610 PF00324 Amino acid permease FDE89_RS10640 PF01545 Cation efflux family FDE89_RS10645 PF00873 AcrB/AcrD/AcrF family FDE89_RS10670 PF04191 Phospholipid methyltransferase FDE89_RS10695 PF12848 ABC transporter FDE89_RS10695 PF00005 ABC transporter FDE89_RS10700 PF01053 Cys/Met metabolism PLP-dependent enzyme FDE89_RS10705 PF00106 short chain dehydrogenase FDE89_RS10710 PF00916 Sulfate permease family FDE89_RS10710 PF01740 STAS domain FDE89_RS10715 PF00575 S1 RNA binding domain FDE89_RS10715 PF16921 Tex protein YqgF-like domain FDE89_RS10715 PF17674 HHH domain FDE89_RS10715 PF09371 Tex-like protein N-terminal domain FDE89_RS10720 PF00072 Response regulator receiver domain FDE89_RS10720 PF00486 Transcriptional regulatory protein, C terminal FDE89_RS10725 PF00512 His Kinase A (phospho-acceptor) domain FDE89_RS10725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDE89_RS10725 PF00672 HAMP domain FDE89_RS10735 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain FDE89_RS10735 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain FDE89_RS10740 PF00583 Acetyltransferase (GNAT) family FDE89_RS10760 PF00475 Imidazoleglycerol-phosphate dehydratase FDE89_RS10765 PF00117 Glutamine amidotransferase class-I FDE89_RS10780 PF00977 Histidine biosynthesis protein FDE89_RS10795 PF03992 Antibiotic biosynthesis monooxygenase FDE89_RS10810 PF01636 Phosphotransferase enzyme family FDE89_RS10815 PF00977 Histidine biosynthesis protein FDE89_RS10830 PF00230 Major intrinsic protein FDE89_RS10855 PF02705 K+ potassium transporter FDE89_RS10875 PF02525 Flavodoxin-like fold FDE89_RS10885 PF01638 HxlR-like helix-turn-helix FDE89_RS10920 PF12833 Helix-turn-helix domain FDE89_RS10920 PF02311 AraC-like ligand binding domain FDE89_RS10925 PF00248 Aldo/keto reductase family FDE89_RS10945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDE89_RS10945 PF03466 LysR substrate binding domain FDE89_RS10950 PF07690 Major Facilitator Superfamily FDE89_RS10970 PF01593 Flavin containing amine oxidoreductase FDE89_RS10975 PF05726 Pirin C-terminal cupin domain FDE89_RS10975 PF02678 Pirin FDE89_RS10980 PF00857 Isochorismatase family FDE89_RS10985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDE89_RS10990 PF00171 Aldehyde dehydrogenase family FDE89_RS10995 PF00202 Aminotransferase class-III FDE89_RS11000 PF00392 Bacterial regulatory proteins, gntR family FDE89_RS11000 PF00155 Aminotransferase class I and II FDE89_RS11005 PF00324 Amino acid permease FDE89_RS11015 PF03591 AzlC protein FDE89_RS11025 PF00436 Single-strand binding protein family FDE89_RS11030 PF07690 Major Facilitator Superfamily FDE89_RS11040 PF03070 TENA/THI-4/PQQC family FDE89_RS11040 PF08543 Phosphomethylpyrimidine kinase FDE89_RS11040 PF02581 Thiamine monophosphate synthase FDE89_RS11045 PF06942 GlpM protein FDE89_RS11055 PF08240 Alcohol dehydrogenase GroES-like domain FDE89_RS11055 PF00107 Zinc-binding dehydrogenase FDE89_RS11060 PF00440 Bacterial regulatory proteins, tetR family FDE89_RS11060 PF16925 Tetracyclin repressor-like, C-terminal domain FDE89_RS11065 PF17755 UvrA DNA-binding domain FDE89_RS11065 PF00005 ABC transporter FDE89_RS11065 PF17760 UvrA interaction domain FDE89_RS11075 PF00990 Diguanylate cyclase, GGDEF domain FDE89_RS11085 PF02028 BCCT, betaine/carnitine/choline family transporter FDE89_RS11095 PF00474 Sodium:solute symporter family FDE89_RS11100 PF04341 Protein of unknown function, DUF485 FDE89_RS11105 PF00072 Response regulator receiver domain FDE89_RS11105 PF01627 Hpt domain FDE89_RS11105 PF00512 His Kinase A (phospho-acceptor) domain FDE89_RS11105 PF00672 HAMP domain FDE89_RS11105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDE89_RS11115 PF00196 Bacterial regulatory proteins, luxR family FDE89_RS11115 PF00072 Response regulator receiver domain FDE89_RS11120 PF03358 NADPH-dependent FMN reductase FDE89_RS11125 PF00296 Luciferase-like monooxygenase FDE89_RS11130 PF00872 Transposase, Mutator family FDE89_RS11135 PF01037 Lrp/AsnC ligand binding domain FDE89_RS11140 PF00857 Isochorismatase family FDE89_RS11145 PF16177 Acetyl-coenzyme A synthetase N-terminus FDE89_RS11145 PF00501 AMP-binding enzyme FDE89_RS11145 PF13193 AMP-binding enzyme C-terminal domain FDE89_RS11155 PF00924 Mechanosensitive ion channel FDE89_RS11160 PF04452 RNA methyltransferase FDE89_RS11170 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FDE89_RS11190 PF01368 DHH family FDE89_RS11190 PF02272 DHHA1 domain FDE89_RS11190 PF17768 RecJ OB domain FDE89_RS11195 PF01243 Pyridoxamine 5'-phosphate oxidase FDE89_RS11195 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region FDE89_RS11200 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FDE89_RS11200 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FDE89_RS11200 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FDE89_RS11200 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FDE89_RS11205 PF00571 CBS domain FDE89_RS11205 PF00478 IMP dehydrogenase / GMP reductase domain FDE89_RS11210 PF03692 Putative zinc- or iron-chelating domain FDE89_RS11215 PF01613 Flavin reductase like domain FDE89_RS11215 PF00258 Flavodoxin FDE89_RS11220 PF07715 TonB-dependent Receptor Plug Domain FDE89_RS11220 PF00593 TonB dependent receptor FDE89_RS11225 PF01169 Uncharacterized protein family UPF0016 FDE89_RS11235 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FDE89_RS11235 PF00364 Biotin-requiring enzyme FDE89_RS11235 PF02817 e3 binding domain FDE89_RS11240 PF00456 Transketolase, thiamine diphosphate binding domain FDE89_RS11240 PF17831 Pyruvate dehydrogenase E1 component middle domain FDE89_RS11245 PF01551 Peptidase family M23 FDE89_RS11255 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase FDE89_RS11260 PF12327 FtsZ family, C-terminal domain FDE89_RS11260 PF00091 Tubulin/FtsZ family, GTPase domain FDE89_RS11265 PF02491 SHS2 domain inserted in FTSA FDE89_RS11270 PF08478 POTRA domain, FtsQ-type FDE89_RS11270 PF03799 Cell division protein FtsQ FDE89_RS11275 PF01820 D-ala D-ala ligase N-terminus FDE89_RS11275 PF07478 D-ala D-ala ligase C-terminus FDE89_RS11280 PF08245 Mur ligase middle domain FDE89_RS11280 PF01225 Mur ligase family, catalytic domain FDE89_RS11280 PF02875 Mur ligase family, glutamate ligase domain FDE89_RS11285 PF04101 Glycosyltransferase family 28 C-terminal domain FDE89_RS11285 PF03033 Glycosyltransferase family 28 N-terminal domain FDE89_RS11290 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FDE89_RS11290 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FDE89_RS11300 PF00593 TonB dependent receptor FDE89_RS11300 PF07715 TonB-dependent Receptor Plug Domain FDE89_RS11305 PF00156 Phosphoribosyl transferase domain FDE89_RS11310 PF03372 Endonuclease/Exonuclease/phosphatase family FDE89_RS11315 PF03960 ArsC family FDE89_RS11325 PF07859 alpha/beta hydrolase fold FDE89_RS11330 PF07694 5TMR of 5TMR-LYT FDE89_RS11330 PF00990 Diguanylate cyclase, GGDEF domain FDE89_RS11335 PF02683 Cytochrome C biogenesis protein transmembrane region FDE89_RS11335 PF11412 Disulphide bond corrector protein DsbC FDE89_RS11365 PF00576 HIUase/Transthyretin family FDE89_RS11370 PF00860 Permease family FDE89_RS11380 PF01494 FAD binding domain FDE89_RS11385 PF03561 Allantoicase repeat FDE89_RS11390 PF04115 Ureidoglycolate lyase FDE89_RS11395 PF00106 short chain dehydrogenase FDE89_RS11400 PF00204 DNA gyrase B FDE89_RS11400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDE89_RS11400 PF00986 DNA gyrase B subunit, carboxyl terminus FDE89_RS11400 PF01751 Toprim domain FDE89_RS11405 PF05728 Uncharacterised protein family (UPF0227) FDE89_RS11420 PF00877 NlpC/P60 family FDE89_RS11420 PF01476 LysM domain FDE89_RS11425 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) FDE89_RS11425 PF04717 Type VI secretion system, phage-baseplate injector FDE89_RS11425 PF13296 Putative type VI secretion system Rhs element Vgr FDE89_RS11430 PF02600 Disulfide bond formation protein DsbB FDE89_RS11435 PF04262 Glutamate-cysteine ligase FDE89_RS11450 PF04286 Protein of unknown function (DUF445) FDE89_RS11455 PF00155 Aminotransferase class I and II FDE89_RS11460 PF01554 MatE FDE89_RS11465 PF00106 short chain dehydrogenase FDE89_RS11475 PF00072 Response regulator receiver domain FDE89_RS11475 PF00486 Transcriptional regulatory protein, C terminal FDE89_RS11480 PF00989 PAS fold FDE89_RS11480 PF11808 Phosphate regulon sensor protein PhoR FDE89_RS11480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDE89_RS11480 PF00512 His Kinase A (phospho-acceptor) domain FDE89_RS11500 PF03069 Acetamidase/Formamidase family FDE89_RS11505 PF02666 Phosphatidylserine decarboxylase FDE89_RS11510 PF00581 Rhodanese-like domain FDE89_RS11515 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FDE89_RS11515 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain FDE89_RS11520 PF02580 D-Tyr-tRNA(Tyr) deacylase FDE89_RS11550 PF00925 GTP cyclohydrolase II FDE89_RS11550 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FDE89_RS11555 PF00885 6,7-dimethyl-8-ribityllumazine synthase FDE89_RS11560 PF01029 NusB family FDE89_RS11565 PF00586 AIR synthase related protein, N-terminal domain FDE89_RS11565 PF02769 AIR synthase related protein, C-terminal domain FDE89_RS11570 PF04608 Phosphatidylglycerophosphatase A FDE89_RS11575 PF00132 Bacterial transferase hexapeptide (six repeats) FDE89_RS11575 PF12804 MobA-like NTP transferase domain FDE89_RS11575 PF14602 Hexapeptide repeat of succinyl-transferase FDE89_RS11580 PF01380 SIS domain FDE89_RS11585 PF01177 Asp/Glu/Hydantoin racemase FDE89_RS11600 PF00491 Arginase family FDE89_RS11610 PF00324 Amino acid permease FDE89_RS11615 PF00221 Aromatic amino acid lyase FDE89_RS11620 PF17391 Urocanase N-terminal domain FDE89_RS11620 PF17392 Urocanase C-terminal domain FDE89_RS11620 PF01175 Urocanase Rossmann-like domain FDE89_RS11625 PF05962 HutD FDE89_RS11630 PF00392 Bacterial regulatory proteins, gntR family FDE89_RS11630 PF07702 UTRA domain FDE89_RS11640 PF07683 Cobalamin synthesis protein cobW C-terminal domain FDE89_RS11640 PF02492 CobW/HypB/UreG, nucleotide-binding domain FDE89_RS11650 PF00324 Amino acid permease FDE89_RS11660 PF02798 Glutathione S-transferase, N-terminal domain FDE89_RS11660 PF14497 Glutathione S-transferase, C-terminal domain FDE89_RS11665 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FDE89_RS11675 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FDE89_RS11680 PF04463 Protein of unknown function (DUF523) FDE89_RS11685 PF01554 MatE FDE89_RS11690 PF01758 Sodium Bile acid symporter family FDE89_RS11695 PF00857 Isochorismatase family FDE89_RS11700 PF00701 Dihydrodipicolinate synthetase family FDE89_RS11710 PF01259 SAICAR synthetase FDE89_RS11720 PF01226 Formate/nitrite transporter FDE89_RS11725 PF12002 MgsA AAA+ ATPase C terminal FDE89_RS11725 PF16193 AAA C-terminal domain FDE89_RS11725 PF00004 ATPase family associated with various cellular activities (AAA) FDE89_RS11730 PF07995 Glucose / Sorbosone dehydrogenase FDE89_RS11735 PF03692 Putative zinc- or iron-chelating domain FDE89_RS11740 PF07043 Protein of unknown function (DUF1328) FDE89_RS11755 PF14815 NUDIX domain FDE89_RS11755 PF10576 Iron-sulfur binding domain of endonuclease III FDE89_RS11755 PF00633 Helix-hairpin-helix motif FDE89_RS11755 PF00730 HhH-GPD superfamily base excision DNA repair protein FDE89_RS11770 PF03352 Methyladenine glycosylase FDE89_RS11775 PF00107 Zinc-binding dehydrogenase FDE89_RS11775 PF08240 Alcohol dehydrogenase GroES-like domain FDE89_RS11795 PF03466 LysR substrate binding domain FDE89_RS11795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDE89_RS11800 PF00248 Aldo/keto reductase family FDE89_RS11805 PF07690 Major Facilitator Superfamily FDE89_RS11815 PF01113 Dihydrodipicolinate reductase, N-terminus FDE89_RS11815 PF05173 Dihydrodipicolinate reductase, C-terminus FDE89_RS11825 PF00684 DnaJ central domain FDE89_RS11825 PF00226 DnaJ domain FDE89_RS11825 PF01556 DnaJ C terminal domain FDE89_RS11835 PF00873 AcrB/AcrD/AcrF family FDE89_RS11840 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDE89_RS11845 PF00440 Bacterial regulatory proteins, tetR family FDE89_RS11845 PF08361 MAATS-type transcriptional repressor, C-terminal region FDE89_RS11850 PF00311 Phosphoenolpyruvate carboxylase FDE89_RS11855 PF00860 Permease family FDE89_RS11875 PF00920 Dehydratase family FDE89_RS11880 PF00551 Formyl transferase FDE89_RS11880 PF02911 Formyl transferase, C-terminal domain FDE89_RS11885 PF01029 NusB family FDE89_RS11885 PF01189 16S rRNA methyltransferase RsmB/F FDE89_RS11895 PF00209 Sodium:neurotransmitter symporter family FDE89_RS11935 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FDE89_RS11940 PF07859 alpha/beta hydrolase fold FDE89_RS11965 PF01025 GrpE FDE89_RS11970 PF00012 Hsp70 protein FDE89_RS11990 PF13406 Transglycosylase SLT domain FDE89_RS11995 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain FDE89_RS11995 PF02222 ATP-grasp domain FDE89_RS12000 PF00731 AIR carboxylase FDE89_RS12015 PF08245 Mur ligase middle domain FDE89_RS12015 PF02875 Mur ligase family, glutamate ligase domain FDE89_RS12015 PF01225 Mur ligase family, catalytic domain FDE89_RS12025 PF01569 PAP2 superfamily FDE89_RS12030 PF03741 Integral membrane protein TerC family FDE89_RS12040 PF03738 Glutathionylspermidine synthase preATP-grasp FDE89_RS12045 PF00355 Rieske [2Fe-2S] domain FDE89_RS12050 PF01979 Amidohydrolase family FDE89_RS12055 PF00156 Phosphoribosyl transferase domain FDE89_RS12065 PF10411 Disulfide bond isomerase protein N-terminus FDE89_RS12065 PF13098 Thioredoxin-like domain FDE89_RS12070 PF16916 Dimerisation domain of Zinc Transporter FDE89_RS12070 PF01545 Cation efflux family FDE89_RS12075 PF02583 Metal-sensitive transcriptional repressor FDE89_RS12080 PF12631 MnmE helical domain FDE89_RS12080 PF10396 GTP-binding protein TrmE N-terminus FDE89_RS12080 PF01926 50S ribosome-binding GTPase FDE89_RS12085 PF14849 YidC periplasmic domain FDE89_RS12085 PF02096 60Kd inner membrane protein FDE89_RS12090 PF01809 Putative membrane protein insertion efficiency factor FDE89_RS12095 PF00825 Ribonuclease P FDE89_RS12100 PF00468 Ribosomal protein L34 FDE89_RS12105 PF11638 DnaA N-terminal domain FDE89_RS12105 PF00308 Bacterial dnaA protein FDE89_RS12105 PF08299 Bacterial dnaA protein helix-turn-helix FDE89_RS12110 PF02768 DNA polymerase III beta subunit, C-terminal domain FDE89_RS12110 PF00712 DNA polymerase III beta subunit, N-terminal domain FDE89_RS12110 PF02767 DNA polymerase III beta subunit, central domain FDE89_RS12115 PF02463 RecF/RecN/SMC N terminal domain FDE89_RS12120 PF00204 DNA gyrase B FDE89_RS12120 PF00986 DNA gyrase B subunit, carboxyl terminus FDE89_RS12120 PF18053 DNA gyrase B subunit insert domain FDE89_RS12120 PF01751 Toprim domain FDE89_RS12120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDE89_RS12130 PF09335 SNARE associated Golgi protein FDE89_RS12135 PF12848 ABC transporter FDE89_RS12135 PF00005 ABC transporter FDE89_RS12155 PF01521 Iron-sulphur cluster biosynthesis FDE89_RS12160 PF00561 alpha/beta hydrolase fold FDE89_RS12165 PF03702 Anhydro-N-acetylmuramic acid kinase FDE89_RS12170 PF00579 tRNA synthetases class I (W and Y) FDE89_RS12205 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FDE89_RS12210 PF01252 Signal peptidase (SPase) II FDE89_RS12215 PF06827 Zinc finger found in FPG and IleRS FDE89_RS12215 PF00133 tRNA synthetases class I (I, L, M and V) FDE89_RS12215 PF08264 Anticodon-binding domain of tRNA FDE89_RS12220 PF06574 FAD synthetase FDE89_RS12220 PF01687 Riboflavin kinase FDE89_RS12230 PF01048 Phosphorylase superfamily FDE89_RS12235 PF08362 YcdC-like protein, C-terminal region FDE89_RS12235 PF00440 Bacterial regulatory proteins, tetR family FDE89_RS12240 PF00005 ABC transporter FDE89_RS12245 PF00528 Binding-protein-dependent transport system inner membrane component FDE89_RS12250 PF00296 Luciferase-like monooxygenase FDE89_RS12255 PF09084 NMT1/THI5 like FDE89_RS12260 PF09084 NMT1/THI5 like FDE89_RS12265 PF00696 Amino acid kinase family FDE89_RS12265 PF00583 Acetyltransferase (GNAT) family FDE89_RS12280 PF00106 short chain dehydrogenase FDE89_RS12285 PF13419 Haloacid dehalogenase-like hydrolase FDE89_RS12295 PF01323 DSBA-like thioredoxin domain FDE89_RS12300 PF08360 QacR-like protein, C-terminal region FDE89_RS12300 PF00440 Bacterial regulatory proteins, tetR family FDE89_RS12305 PF00440 Bacterial regulatory proteins, tetR family FDE89_RS12310 PF00175 Oxidoreductase NAD-binding domain FDE89_RS12315 PF00487 Fatty acid desaturase FDE89_RS12320 PF01138 3' exoribonuclease family, domain 1 FDE89_RS12320 PF03725 3' exoribonuclease family, domain 2 FDE89_RS12325 PF05506 Domain of unknown function (DUF756) FDE89_RS12325 PF04185 Phosphoesterase family FDE89_RS12335 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FDE89_RS12335 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FDE89_RS12340 PF01510 N-acetylmuramoyl-L-alanine amidase FDE89_RS12345 PF03023 Lipid II flippase MurJ FDE89_RS12350 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FDE89_RS12350 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FDE89_RS12355 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FDE89_RS12355 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FDE89_RS12360 PF13807 G-rich domain on putative tyrosine kinase FDE89_RS12360 PF13614 AAA domain FDE89_RS12360 PF02706 Chain length determinant protein FDE89_RS12365 PF01451 Low molecular weight phosphotyrosine protein phosphatase FDE89_RS12370 PF18412 Outer-membrane lipoprotein Wza C-terminal domain FDE89_RS12370 PF02563 Polysaccharide biosynthesis/export protein FDE89_RS12370 PF10531 SLBB domain FDE89_RS12375 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FDE89_RS12375 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FDE89_RS12375 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FDE89_RS12380 PF02719 Polysaccharide biosynthesis protein FDE89_RS12385 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FDE89_RS12390 PF02350 UDP-N-acetylglucosamine 2-epimerase FDE89_RS12395 PF03102 NeuB family FDE89_RS12395 PF08666 SAF domain FDE89_RS12405 PF00483 Nucleotidyl transferase FDE89_RS12410 PF02348 Cytidylyltransferase FDE89_RS12455 PF02719 Polysaccharide biosynthesis protein FDE89_RS12455 PF08485 Polysaccharide biosynthesis protein C-terminal FDE89_RS12460 PF01370 NAD dependent epimerase/dehydratase family FDE89_RS12465 PF02350 UDP-N-acetylglucosamine 2-epimerase FDE89_RS12470 PF13579 Glycosyl transferase 4-like domain FDE89_RS12475 PF01370 NAD dependent epimerase/dehydratase family FDE89_RS12480 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 FDE89_RS12480 PF00953 Glycosyl transferase family 4 FDE89_RS12490 PF02719 Polysaccharide biosynthesis protein FDE89_RS12495 PF00483 Nucleotidyl transferase FDE89_RS12500 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FDE89_RS12500 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FDE89_RS12500 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FDE89_RS12505 PF00342 Phosphoglucose isomerase FDE89_RS12510 PF16363 GDP-mannose 4,6 dehydratase FDE89_RS12515 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FDE89_RS12515 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FDE89_RS12515 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FDE89_RS12515 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FDE89_RS12520 PF02652 L-lactate permease FDE89_RS12525 PF07729 FCD domain FDE89_RS12525 PF00392 Bacterial regulatory proteins, gntR family FDE89_RS12530 PF01070 FMN-dependent dehydrogenase FDE89_RS12535 PF01565 FAD binding domain FDE89_RS12535 PF09330 D-lactate dehydrogenase, membrane binding FDE89_RS12540 PF00155 Aminotransferase class I and II FDE89_RS12550 PF07729 FCD domain FDE89_RS12550 PF00392 Bacterial regulatory proteins, gntR family FDE89_RS12560 PF00285 Citrate synthase, C-terminal domain FDE89_RS12565 PF00694 Aconitase C-terminal domain FDE89_RS12565 PF00330 Aconitase family (aconitate hydratase) FDE89_RS12600 PF00665 Integrase core domain FDE89_RS12600 PF13276 HTH-like domain FDE89_RS12600 PF13333 Integrase core domain FDE89_RS12605 PF02801 Beta-ketoacyl synthase, C-terminal domain FDE89_RS12605 PF00109 Beta-ketoacyl synthase, N-terminal domain FDE89_RS12615 PF13296 Putative type VI secretion system Rhs element Vgr FDE89_RS12615 PF04717 Type VI secretion system, phage-baseplate injector FDE89_RS12615 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) FDE89_RS12655 PF00849 RNA pseudouridylate synthase FDE89_RS12670 PF00593 TonB dependent receptor FDE89_RS12670 PF07715 TonB-dependent Receptor Plug Domain FDE89_RS12680 PF01037 Lrp/AsnC ligand binding domain FDE89_RS12685 PF01266 FAD dependent oxidoreductase FDE89_RS12690 PF00842 Alanine racemase, C-terminal domain FDE89_RS12690 PF01168 Alanine racemase, N-terminal domain FDE89_RS12695 PF01042 Endoribonuclease L-PSP FDE89_RS12700 PF00324 Amino acid permease FDE89_RS12705 PF00324 Amino acid permease FDE89_RS12715 PF00171 Aldehyde dehydrogenase family FDE89_RS12720 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FDE89_RS12720 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FDE89_RS12725 PF00501 AMP-binding enzyme FDE89_RS12725 PF13193 AMP-binding enzyme C-terminal domain FDE89_RS12730 PF02770 Acyl-CoA dehydrogenase, middle domain FDE89_RS12730 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDE89_RS12730 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDE89_RS12735 PF00378 Enoyl-CoA hydratase/isomerase FDE89_RS12740 PF00378 Enoyl-CoA hydratase/isomerase FDE89_RS12750 PF00765 Autoinducer synthase FDE89_RS12760 PF03472 Autoinducer binding domain FDE89_RS12760 PF00196 Bacterial regulatory proteins, luxR family FDE89_RS12765 PF00501 AMP-binding enzyme FDE89_RS12770 PF02770 Acyl-CoA dehydrogenase, middle domain FDE89_RS12770 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDE89_RS12770 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDE89_RS12775 PF16197 Ketoacyl-synthetase C-terminal extension FDE89_RS12775 PF02801 Beta-ketoacyl synthase, C-terminal domain FDE89_RS12775 PF00109 Beta-ketoacyl synthase, N-terminal domain FDE89_RS12775 PF08242 Methyltransferase domain FDE89_RS12775 PF00550 Phosphopantetheine attachment site FDE89_RS12775 PF14765 Polyketide synthase dehydratase FDE89_RS12775 PF00975 Thioesterase domain FDE89_RS12780 PF00550 Phosphopantetheine attachment site FDE89_RS12780 PF00668 Condensation domain FDE89_RS12780 PF13193 AMP-binding enzyme C-terminal domain FDE89_RS12780 PF00501 AMP-binding enzyme FDE89_RS12780 PF07993 Male sterility protein FDE89_RS12785 PF13193 AMP-binding enzyme C-terminal domain FDE89_RS12785 PF00501 AMP-binding enzyme FDE89_RS12785 PF00668 Condensation domain FDE89_RS12785 PF00975 Thioesterase domain FDE89_RS12785 PF00550 Phosphopantetheine attachment site FDE89_RS12800 PF12697 Alpha/beta hydrolase family FDE89_RS12805 PF01648 4'-phosphopantetheinyl transferase superfamily FDE89_RS12830 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase FDE89_RS12855 PF00753 Metallo-beta-lactamase superfamily FDE89_RS12865 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FDE89_RS12870 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FDE89_RS12875 PF03091 CutA1 divalent ion tolerance protein FDE89_RS12880 PF00166 Chaperonin 10 Kd subunit FDE89_RS12885 PF00118 TCP-1/cpn60 chaperonin family FDE89_RS12905 PF13936 Helix-turn-helix domain FDE89_RS12905 PF00665 Integrase core domain FDE89_RS12915 PF03389 MobA/MobL family FDE89_RS12915 PF01443 Viral (Superfamily 1) RNA helicase FDE89_RS12915 PF17841 BID domain of Bartonella effector protein (Bep) FDE89_RS12925 PF13610 DDE domain FDE89_RS12940 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FDE89_RS12940 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FDE89_RS12940 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FDE89_RS12940 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FDE89_RS12945 PF00809 Pterin binding enzyme FDE89_RS12970 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FDE89_RS12975 PF00719 Inorganic pyrophosphatase FDE89_RS12990 PF02661 Fic/DOC family FDE89_RS13000 PF02601 Exonuclease VII, large subunit FDE89_RS13000 PF13742 OB-fold nucleic acid binding domain FDE89_RS13015 PF00817 impB/mucB/samB family FDE89_RS13015 PF13438 Domain of unknown function (DUF4113) FDE89_RS13015 PF11799 impB/mucB/samB family C-terminal domain FDE89_RS13015 PF11798 IMS family HHH motif FDE89_RS13020 PF00717 Peptidase S24-like FDE89_RS13025 PF00884 Sulfatase FDE89_RS13025 PF08019 Phosphoethanolamine transferase EptA/EptB FDE89_RS13030 PF00072 Response regulator receiver domain FDE89_RS13030 PF00486 Transcriptional regulatory protein, C terminal FDE89_RS13035 PF00512 His Kinase A (phospho-acceptor) domain FDE89_RS13035 PF08521 Two-component sensor kinase N-terminal FDE89_RS13035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDE89_RS13045 PF01219 Prokaryotic diacylglycerol kinase FDE89_RS13100 PF12161 HsdM N-terminal domain FDE89_RS13100 PF02384 N-6 DNA Methylase FDE89_RS13105 PF01420 Type I restriction modification DNA specificity domain FDE89_RS13115 PF18766 SWI2/SNF2 ATPase FDE89_RS13115 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) FDE89_RS13115 PF12008 Type I restriction and modification enzyme - subunit R C terminal FDE89_RS13130 PF07120 Protein of unknown function (DUF1376) FDE89_RS13165 PF01722 BolA-like protein FDE89_RS13175 PF13614 AAA domain FDE89_RS13190 PF09335 SNARE associated Golgi protein FDE89_RS13195 PF07681 DoxX FDE89_RS13200 PF04286 Protein of unknown function (DUF445) FDE89_RS13205 PF00958 GMP synthase C terminal domain FDE89_RS13205 PF02540 NAD synthase FDE89_RS13205 PF00117 Glutamine amidotransferase class-I FDE89_RS13210 PF13427 Domain of unknown function (DUF4111) FDE89_RS13210 PF01909 Nucleotidyltransferase domain FDE89_RS13215 PF03551 Transcriptional regulator PadR-like family FDE89_RS13225 PF02678 Pirin FDE89_RS13225 PF05726 Pirin C-terminal cupin domain FDE89_RS13245 PF03485 Arginyl tRNA synthetase N terminal domain FDE89_RS13245 PF05746 DALR anticodon binding domain FDE89_RS13245 PF00750 tRNA synthetases class I (R) FDE89_RS13250 PF03949 Malic enzyme, NAD binding domain FDE89_RS13250 PF00390 Malic enzyme, N-terminal domain FDE89_RS13260 PF04261 Dyp-type peroxidase family FDE89_RS13265 PF01810 LysE type translocator FDE89_RS13270 PF00950 ABC 3 transport family FDE89_RS13275 PF00005 ABC transporter FDE89_RS13295 PF00119 ATP synthase A chain FDE89_RS13300 PF00137 ATP synthase subunit C FDE89_RS13305 PF00430 ATP synthase B/B' CF(0) FDE89_RS13310 PF00213 ATP synthase delta (OSCP) subunit FDE89_RS13315 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FDE89_RS13315 PF00306 ATP synthase alpha/beta chain, C terminal domain FDE89_RS13315 PF02874 ATP synthase alpha/beta family, beta-barrel domain FDE89_RS13320 PF00231 ATP synthase FDE89_RS13325 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FDE89_RS13325 PF02874 ATP synthase alpha/beta family, beta-barrel domain FDE89_RS13330 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FDE89_RS13340 PF00255 Glutathione peroxidase FDE89_RS13350 PF07690 Major Facilitator Superfamily FDE89_RS13355 PF00440 Bacterial regulatory proteins, tetR family FDE89_RS13360 PF00892 EamA-like transporter family FDE89_RS13365 PF01300 Telomere recombination FDE89_RS13380 PF01327 Polypeptide deformylase FDE89_RS13405 PF00440 Bacterial regulatory proteins, tetR family FDE89_RS13430 PF00291 Pyridoxal-phosphate dependent enzyme FDE89_RS13440 PF03358 NADPH-dependent FMN reductase FDE89_RS13460 PF04055 Radical SAM superfamily FDE89_RS13460 PF08497 Radical SAM N-terminal FDE89_RS13460 PF11842 Domain of unknown function (DUF3362) FDE89_RS13490 PF03641 Possible lysine decarboxylase FDE89_RS13495 PF03471 Transporter associated domain FDE89_RS13495 PF03741 Integral membrane protein TerC family FDE89_RS13500 PF02810 SEC-C motif FDE89_RS13505 PF03458 UPF0126 domain FDE89_RS13510 PF07690 Major Facilitator Superfamily FDE89_RS13515 PF03989 DNA gyrase C-terminal domain, beta-propeller FDE89_RS13515 PF00521 DNA gyrase/topoisomerase IV, subunit A FDE89_RS13520 PF13193 AMP-binding enzyme C-terminal domain FDE89_RS13520 PF00501 AMP-binding enzyme FDE89_RS13535 PF00719 Inorganic pyrophosphatase FDE89_RS13540 PF03573 outer membrane porin, OprD family FDE89_RS13550 PF00701 Dihydrodipicolinate synthetase family FDE89_RS13565 PF01078 Magnesium chelatase, subunit ChlI FDE89_RS13565 PF13335 Magnesium chelatase, subunit ChlI C-terminal FDE89_RS13575 PF00665 Integrase core domain FDE89_RS13595 PF00582 Universal stress protein family FDE89_RS13600 PF00916 Sulfate permease family FDE89_RS13600 PF01740 STAS domain FDE89_RS13635 PF07690 Major Facilitator Superfamily FDE89_RS13640 PF02909 Tetracyclin repressor-like, C-terminal domain FDE89_RS13640 PF00440 Bacterial regulatory proteins, tetR family FDE89_RS13685 PF13335 Magnesium chelatase, subunit ChlI C-terminal FDE89_RS13685 PF01078 Magnesium chelatase, subunit ChlI FDE89_RS13695 PF00543 Nitrogen regulatory protein P-II FDE89_RS13700 PF00909 Ammonium Transporter Family FDE89_RS13705 PF03477 ATP cone domain FDE89_RS13710 PF01872 RibD C-terminal domain FDE89_RS13710 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FDE89_RS13720 PF00677 Lumazine binding domain FDE89_RS13740 PF00883 Cytosol aminopeptidase family, catalytic domain FDE89_RS13740 PF02789 Cytosol aminopeptidase family, N-terminal domain FDE89_RS13750 PF03739 Lipopolysaccharide export system permease LptF/LptG FDE89_RS13755 PF06415 BPG-independent PGAM N-terminus (iPGM_N) FDE89_RS13755 PF01676 Metalloenzyme superfamily FDE89_RS13760 PF03572 Peptidase family S41 FDE89_RS13760 PF00595 PDZ domain FDE89_RS13765 PF02954 Bacterial regulatory protein, Fis family FDE89_RS13765 PF00158 Sigma-54 interaction domain FDE89_RS13765 PF00072 Response regulator receiver domain FDE89_RS13770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDE89_RS13770 PF00512 His Kinase A (phospho-acceptor) domain FDE89_RS13775 PF00072 Response regulator receiver domain FDE89_RS13775 PF00196 Bacterial regulatory proteins, luxR family FDE89_RS13780 PF00768 D-alanyl-D-alanine carboxypeptidase FDE89_RS13785 PF00291 Pyridoxal-phosphate dependent enzyme FDE89_RS13790 PF03447 Homoserine dehydrogenase, NAD binding domain FDE89_RS13790 PF01842 ACT domain FDE89_RS13790 PF00742 Homoserine dehydrogenase FDE89_RS13795 PF10411 Disulfide bond isomerase protein N-terminus FDE89_RS13795 PF13098 Thioredoxin-like domain FDE89_RS13800 PF00589 Phage integrase family FDE89_RS13800 PF02899 Phage integrase, N-terminal SAM-like domain FDE89_RS13810 PF02421 Ferrous iron transport protein B FDE89_RS13810 PF07670 Nucleoside recognition FDE89_RS13810 PF07664 Ferrous iron transport protein B C terminus FDE89_RS13820 PF02875 Mur ligase family, glutamate ligase domain FDE89_RS13820 PF08245 Mur ligase middle domain FDE89_RS13825 PF01098 Cell cycle protein FDE89_RS13830 PF00749 tRNA synthetases class I (E and Q), catalytic domain FDE89_RS13835 PF01258 Prokaryotic dksA/traR C4-type zinc finger FDE89_RS13840 PF00149 Calcineurin-like phosphoesterase FDE89_RS13845 PF00293 NUDIX domain FDE89_RS13850 PF13667 ThiC-associated domain FDE89_RS13850 PF01964 Radical SAM ThiC family FDE89_RS13865 PF00892 EamA-like transporter family FDE89_RS13870 PF02321 Outer membrane efflux protein FDE89_RS13875 PF01895 PhoU domain FDE89_RS13880 PF04362 Bacterial Fe(2+) trafficking FDE89_RS13885 PF00206 Lyase FDE89_RS13885 PF14698 Argininosuccinate lyase C-terminal FDE89_RS13890 PF06580 Histidine kinase FDE89_RS13890 PF07694 5TMR of 5TMR-LYT FDE89_RS13890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDE89_RS13895 PF00072 Response regulator receiver domain FDE89_RS13895 PF04397 LytTr DNA-binding domain FDE89_RS13900 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FDE89_RS13900 PF03900 Porphobilinogen deaminase, C-terminal domain FDE89_RS13930 PF00816 H-NS histone family FDE89_RS13945 PF03958 Bacterial type II/III secretion system short domain FDE89_RS13945 PF00263 Bacterial type II and III secretion system protein FDE89_RS13950 PF00498 FHA domain FDE89_RS13950 PF12401 Protein of unknown function (DUF2662) FDE89_RS13955 PF13419 Haloacid dehalogenase-like hydrolase FDE89_RS13960 PF04715 Anthranilate synthase component I, N terminal region FDE89_RS13960 PF00425 chorismate binding enzyme FDE89_RS13995 PF00584 SecE/Sec61-gamma subunits of protein translocation complex FDE89_RS14000 PF00467 KOW motif FDE89_RS14000 PF02357 Transcription termination factor nusG FDE89_RS14005 PF00298 Ribosomal protein L11, RNA binding domain FDE89_RS14005 PF03946 Ribosomal protein L11, N-terminal domain FDE89_RS14010 PF00687 Ribosomal protein L1p/L10e family FDE89_RS14015 PF00466 Ribosomal protein L10 FDE89_RS14020 PF00542 Ribosomal protein L7/L12 C-terminal domain FDE89_RS14020 PF16320 Ribosomal protein L7/L12 dimerisation domain FDE89_RS14025 PF04560 RNA polymerase Rpb2, domain 7 FDE89_RS14025 PF04561 RNA polymerase Rpb2, domain 2 FDE89_RS14025 PF04563 RNA polymerase beta subunit FDE89_RS14025 PF04565 RNA polymerase Rpb2, domain 3 FDE89_RS14025 PF10385 RNA polymerase beta subunit external 1 domain FDE89_RS14025 PF00562 RNA polymerase Rpb2, domain 6 FDE89_RS14030 PF04998 RNA polymerase Rpb1, domain 5 FDE89_RS14030 PF05000 RNA polymerase Rpb1, domain 4 FDE89_RS14030 PF04983 RNA polymerase Rpb1, domain 3 FDE89_RS14030 PF00623 RNA polymerase Rpb1, domain 2 FDE89_RS14030 PF04997 RNA polymerase Rpb1, domain 1 FDE89_RS14050 PF00561 alpha/beta hydrolase fold FDE89_RS14055 PF03553 Na+/H+ antiporter family FDE89_RS14055 PF13726 Na+-H+ antiporter family FDE89_RS14070 PF00183 Hsp90 protein FDE89_RS14070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDE89_RS14085 PF01323 DSBA-like thioredoxin domain FDE89_RS14095 PF00376 MerR family regulatory protein FDE89_RS14095 PF09278 MerR, DNA binding FDE89_RS14115 PF00108 Thiolase, N-terminal domain FDE89_RS14115 PF02803 Thiolase, C-terminal domain FDE89_RS14120 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FDE89_RS14120 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FDE89_RS14120 PF00378 Enoyl-CoA hydratase/isomerase FDE89_RS14145 PF08459 UvrC Helix-hairpin-helix N-terminal FDE89_RS14145 PF02151 UvrB/uvrC motif FDE89_RS14145 PF01541 GIY-YIG catalytic domain FDE89_RS14155 PF01066 CDP-alcohol phosphatidyltransferase FDE89_RS14160 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FDE89_RS14160 PF02805 Metal binding domain of Ada FDE89_RS14160 PF12833 Helix-turn-helix domain FDE89_RS14160 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FDE89_RS14185 PF13533 Biotin-lipoyl like FDE89_RS14190 PF03652 Holliday junction resolvase FDE89_RS14200 PF02463 RecF/RecN/SMC N terminal domain FDE89_RS14210 PF06865 Pyrimidine/purine nucleoside phosphorylase FDE89_RS14215 PF00588 SpoU rRNA Methylase family FDE89_RS14215 PF08032 RNA 2'-O ribose methyltransferase substrate binding FDE89_RS14225 PF01121 Dephospho-CoA kinase FDE89_RS14230 PF06750 Bacterial Peptidase A24 N-terminal domain FDE89_RS14230 PF01478 Type IV leader peptidase family FDE89_RS14235 PF00482 Type II secretion system (T2SS), protein F FDE89_RS14240 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FDE89_RS14240 PF00437 Type II/IV secretion system protein FDE89_RS14245 PF00121 Triosephosphate isomerase FDE89_RS14250 PF03840 Preprotein translocase SecG subunit FDE89_RS14270 PF17384 RimP C-terminal SH3 domain FDE89_RS14270 PF02576 RimP N-terminal domain FDE89_RS14275 PF00575 S1 RNA binding domain FDE89_RS14275 PF13184 NusA-like KH domain FDE89_RS14275 PF08529 NusA N-terminal domain FDE89_RS14280 PF00009 Elongation factor Tu GTP binding domain FDE89_RS14280 PF11987 Translation-initiation factor 2 FDE89_RS14280 PF04760 Translation initiation factor IF-2, N-terminal region FDE89_RS14280 PF08364 Bacterial translation initiation factor IF-2 associated region FDE89_RS14285 PF02033 Ribosome-binding factor A FDE89_RS14290 PF03334 Na+/H+ antiporter subunit FDE89_RS14295 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) FDE89_RS14300 PF01899 Na+/H+ ion antiporter subunit FDE89_RS14305 PF00361 Proton-conducting membrane transporter FDE89_RS14310 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FDE89_RS14315 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter FDE89_RS14315 PF13244 Domain of unknown function (DUF4040) FDE89_RS14315 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FDE89_RS14315 PF00361 Proton-conducting membrane transporter FDE89_RS14330 PF01502 Phosphoribosyl-AMP cyclohydrolase FDE89_RS14335 PF01494 FAD binding domain FDE89_RS14340 PF03109 ABC1 family FDE89_RS14350 PF01209 ubiE/COQ5 methyltransferase family FDE89_RS14360 PF03976 Polyphosphate kinase 2 (PPK2) FDE89_RS14370 PF17946 RecC C-terminal domain FDE89_RS14375 PF13361 UvrD-like helicase C-terminal domain FDE89_RS14375 PF00580 UvrD/REP helicase N-terminal domain FDE89_RS14375 PF12705 PD-(D/E)XK nuclease superfamily FDE89_RS14380 PF13538 UvrD-like helicase C-terminal domain FDE89_RS14385 PF00144 Beta-lactamase FDE89_RS14390 PF00312 Ribosomal protein S15 FDE89_RS14395 PF00013 KH domain FDE89_RS14395 PF03725 3' exoribonuclease family, domain 2 FDE89_RS14395 PF01138 3' exoribonuclease family, domain 1 FDE89_RS14395 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FDE89_RS14395 PF00575 S1 RNA binding domain FDE89_RS14400 PF01544 CorA-like Mg2+ transporter protein FDE89_RS14410 PF01556 DnaJ C terminal domain FDE89_RS14410 PF00226 DnaJ domain FDE89_RS14420 PF01430 Hsp33 protein FDE89_RS14425 PF02254 TrkA-N domain FDE89_RS14425 PF00999 Sodium/hydrogen exchanger family FDE89_RS14430 PF18074 Primosomal protein N C-terminal domain FDE89_RS14430 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FDE89_RS14430 PF00271 Helicase conserved C-terminal domain FDE89_RS14430 PF00270 DEAD/DEAH box helicase FDE89_RS14430 PF17764 3′ DNA-binding domain (3′BD) FDE89_RS14435 PF00482 Type II secretion system (T2SS), protein F FDE89_RS14440 PF07963 Prokaryotic N-terminal methylation motif FDE89_RS14440 PF08334 Type II secretion system (T2SS), protein G FDE89_RS14450 PF01588 Putative tRNA binding domain FDE89_RS14455 PF00795 Carbon-nitrogen hydrolase FDE89_RS14460 PF00571 CBS domain FDE89_RS14460 PF03471 Transporter associated domain FDE89_RS14465 PF01206 Sulfurtransferase TusA FDE89_RS14480 PF01177 Asp/Glu/Hydantoin racemase FDE89_RS14490 PF00762 Ferrochelatase FDE89_RS14495 PF00753 Metallo-beta-lactamase superfamily FDE89_RS14500 PF03884 DNA gyrase inhibitor YacG FDE89_RS14520 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FDE89_RS14535 PF01197 Ribosomal protein L31 FDE89_RS14540 PF03109 ABC1 family FDE89_RS14545 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDE89_RS14545 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FDE89_RS14550 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDE89_RS14550 PF02770 Acyl-CoA dehydrogenase, middle domain FDE89_RS14550 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FDE89_RS14555 PF01554 MatE FDE89_RS14565 PF06969 HemN C-terminal domain FDE89_RS14565 PF04055 Radical SAM superfamily FDE89_RS14570 PF00106 short chain dehydrogenase FDE89_RS14575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDE89_RS14575 PF03466 LysR substrate binding domain FDE89_RS14590 PF13193 AMP-binding enzyme C-terminal domain FDE89_RS14590 PF00501 AMP-binding enzyme FDE89_RS14595 PF10150 Ribonuclease E/G family FDE89_RS14595 PF12111 Polyribonucleotide phosphorylase C terminal FDE89_RS14595 PF00575 S1 RNA binding domain FDE89_RS14605 PF01479 S4 domain FDE89_RS14605 PF00849 RNA pseudouridylate synthase FDE89_RS14610 PF13419 Haloacid dehalogenase-like hydrolase FDE89_RS14615 PF08279 HTH domain FDE89_RS14615 PF13280 WYL domain FDE89_RS14620 PF02798 Glutathione S-transferase, N-terminal domain FDE89_RS14630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDE89_RS14630 PF03466 LysR substrate binding domain FDE89_RS14635 PF12706 Beta-lactamase superfamily domain FDE89_RS14640 PF00141 Peroxidase FDE89_RS14645 PF00391 PEP-utilising enzyme, mobile domain FDE89_RS14645 PF05524 PEP-utilising enzyme, N-terminal FDE89_RS14645 PF01590 GAF domain FDE89_RS14645 PF02896 PEP-utilising enzyme, TIM barrel domain FDE89_RS14650 PF00293 NUDIX domain FDE89_RS14670 PF03466 LysR substrate binding domain FDE89_RS14670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDE89_RS14680 PF00330 Aconitase family (aconitate hydratase) FDE89_RS14685 PF00694 Aconitase C-terminal domain FDE89_RS14695 PF00180 Isocitrate/isopropylmalate dehydrogenase FDE89_RS14710 PF01176 Translation initiation factor 1A / IF-1 FDE89_RS14720 PF01416 tRNA pseudouridine synthase FDE89_RS14740 PF01118 Semialdehyde dehydrogenase, NAD binding domain FDE89_RS14740 PF02774 Semialdehyde dehydrogenase, dimerisation domain FDE89_RS14750 PF00375 Sodium:dicarboxylate symporter family FDE89_RS14760 PF03279 Bacterial lipid A biosynthesis acyltransferase FDE89_RS14765 PF01810 LysE type translocator FDE89_RS14770 PF12848 ABC transporter FDE89_RS14770 PF00005 ABC transporter FDE89_RS14770 PF16326 ABC transporter C-terminal domain FDE89_RS14775 PF04102 SlyX FDE89_RS14780 PF00107 Zinc-binding dehydrogenase FDE89_RS14780 PF08240 Alcohol dehydrogenase GroES-like domain FDE89_RS14785 PF01638 HxlR-like helix-turn-helix FDE89_RS14795 PF01396 Topoisomerase DNA binding C4 zinc finger FDE89_RS14795 PF01751 Toprim domain FDE89_RS14795 PF01131 DNA topoisomerase FDE89_RS14795 PF08272 Topoisomerase I zinc-ribbon-like FDE89_RS14810 PF00580 UvrD/REP helicase N-terminal domain FDE89_RS14810 PF13361 UvrD-like helicase C-terminal domain FDE89_RS14815 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) FDE89_RS14835 PF02254 TrkA-N domain FDE89_RS14835 PF00999 Sodium/hydrogen exchanger family FDE89_RS14840 PF00471 Ribosomal protein L33 FDE89_RS14845 PF00830 Ribosomal L28 family FDE89_RS14850 PF00171 Aldehyde dehydrogenase family FDE89_RS14860 PF01842 ACT domain FDE89_RS14860 PF00551 Formyl transferase FDE89_RS14870 PF01618 MotA/TolQ/ExbB proton channel family FDE89_RS14880 PF01625 Peptide methionine sulfoxide reductase FDE89_RS14890 PF00186 Dihydrofolate reductase FDE89_RS14895 PF00303 Thymidylate synthase FDE89_RS14910 PF01790 Prolipoprotein diacylglyceryl transferase FDE89_RS14930 PF00902 Sec-independent protein translocase protein (TatC) FDE89_RS14935 PF02416 mttA/Hcf106 family FDE89_RS14940 PF02416 mttA/Hcf106 family FDE89_RS14950 PF01725 Ham1 family FDE89_RS14960 PF07021 Methionine biosynthesis protein MetW FDE89_RS14960 PF00561 alpha/beta hydrolase fold FDE89_RS14965 PF00561 alpha/beta hydrolase fold FDE89_RS14970 PF00682 HMGL-like FDE89_RS14970 PF08502 LeuA allosteric (dimerisation) domain FDE89_RS14975 PF18331 PKHD-type hydroxylase C-terminal domain FDE89_RS14975 PF13640 2OG-Fe(II) oxygenase superfamily FDE89_RS14985 PF05697 Bacterial trigger factor protein (TF) FDE89_RS14985 PF05698 Bacterial trigger factor protein (TF) C-terminus FDE89_RS14985 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FDE89_RS14990 PF00574 Clp protease FDE89_RS14995 PF06689 ClpX C4-type zinc finger FDE89_RS14995 PF07724 AAA domain (Cdc48 subfamily) FDE89_RS14995 PF10431 C-terminal, D2-small domain, of ClpB protein FDE89_RS15010 PF05683 Fumarase C-terminus FDE89_RS15010 PF05681 Fumarate hydratase (Fumerase) FDE89_RS15015 PF01515 Phosphate acetyl/butaryl transferase FDE89_RS15015 PF07085 DRTGG domain FDE89_RS15020 PF00871 Acetokinase family FDE89_RS15025 PF00920 Dehydratase family FDE89_RS15030 PF01081 KDPG and KHG aldolase FDE89_RS15035 PF02447 GntP family permease FDE89_RS15040 PF01202 Shikimate kinase FDE89_RS15045 PF00171 Aldehyde dehydrogenase family FDE89_RS15050 PF00171 Aldehyde dehydrogenase family FDE89_RS15055 PF00561 alpha/beta hydrolase fold FDE89_RS15065 PF00933 Glycosyl hydrolase family 3 N terminal domain FDE89_RS15070 PF17804 Tail specific protease N-terminal domain FDE89_RS15070 PF03572 Peptidase family S41 FDE89_RS15070 PF00595 PDZ domain FDE89_RS15070 PF11818 C-terminal domain of tail specific protease (DUF3340) FDE89_RS15075 PF13439 Glycosyltransferase Family 4 FDE89_RS15075 PF00534 Glycosyl transferases group 1 FDE89_RS15080 PF01569 PAP2 superfamily FDE89_RS15085 PF04384 Iron-sulphur cluster assembly FDE89_RS15090 PF00334 Nucleoside diphosphate kinase FDE89_RS15095 PF04055 Radical SAM superfamily FDE89_RS15105 PF13464 Domain of unknown function (DUF4115) FDE89_RS15110 PF04551 GcpE protein FDE89_RS15115 PF03129 Anticodon binding domain FDE89_RS15115 PF13393 Histidyl-tRNA synthetase FDE89_RS15125 PF13360 PQQ-like domain FDE89_RS15130 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FDE89_RS15130 PF01926 50S ribosome-binding GTPase FDE89_RS15145 PF00550 Phosphopantetheine attachment site FDE89_RS15150 PF00550 Phosphopantetheine attachment site FDE89_RS15160 PF13193 AMP-binding enzyme C-terminal domain FDE89_RS15160 PF00501 AMP-binding enzyme FDE89_RS15175 PF00221 Aromatic amino acid lyase FDE89_RS15195 PF04820 Tryptophan halogenase FDE89_RS15205 PF02801 Beta-ketoacyl synthase, C-terminal domain FDE89_RS15205 PF00109 Beta-ketoacyl synthase, N-terminal domain FDE89_RS15220 PF02801 Beta-ketoacyl synthase, C-terminal domain FDE89_RS15220 PF00109 Beta-ketoacyl synthase, N-terminal domain FDE89_RS15235 PF02556 Preprotein translocase subunit SecB FDE89_RS15240 PF00462 Glutaredoxin FDE89_RS15250 PF03193 RsgA GTPase FDE89_RS15255 PF00929 Exonuclease FDE89_RS15270 PF02321 Outer membrane efflux protein FDE89_RS15275 PF00005 ABC transporter FDE89_RS15275 PF02687 FtsX-like permease family FDE89_RS15275 PF12704 MacB-like periplasmic core domain FDE89_RS15280 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDE89_RS15295 PF13603 Leucyl-tRNA synthetase, Domain 2 FDE89_RS15295 PF00133 tRNA synthetases class I (I, L, M and V) FDE89_RS15295 PF08264 Anticodon-binding domain of tRNA FDE89_RS15295 PF09334 tRNA synthetases class I (M) FDE89_RS15305 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FDE89_RS15305 PF00205 Thiamine pyrophosphate enzyme, central domain FDE89_RS15305 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FDE89_RS15310 PF10369 Small subunit of acetolactate synthase FDE89_RS15315 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FDE89_RS15315 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FDE89_RS15320 PF00563 EAL domain FDE89_RS15320 PF03707 Bacterial signalling protein N terminal repeat FDE89_RS15320 PF00990 Diguanylate cyclase, GGDEF domain FDE89_RS15350 PF00009 Elongation factor Tu GTP binding domain FDE89_RS15350 PF16658 Class II release factor RF3, C-terminal domain FDE89_RS15350 PF03144 Elongation factor Tu domain 2 FDE89_RS15365 PF01026 TatD related DNase FDE89_RS15370 PF00694 Aconitase C-terminal domain FDE89_RS15370 PF00330 Aconitase family (aconitate hydratase) FDE89_RS15380 PF00899 ThiF family FDE89_RS15390 PF03466 LysR substrate binding domain FDE89_RS15390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDE89_RS15400 PF01207 Dihydrouridine synthase (Dus) FDE89_RS15405 PF07690 Major Facilitator Superfamily FDE89_RS15415 PF00892 EamA-like transporter family FDE89_RS15420 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FDE89_RS15420 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FDE89_RS15425 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch FDE89_RS15430 PF02233 NAD(P) transhydrogenase beta subunit FDE89_RS15435 PF00106 short chain dehydrogenase FDE89_RS15445 PF01261 Xylose isomerase-like TIM barrel FDE89_RS15450 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FDE89_RS15450 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FDE89_RS15455 PF00378 Enoyl-CoA hydratase/isomerase FDE89_RS15460 PF01627 Hpt domain FDE89_RS15460 PF00512 His Kinase A (phospho-acceptor) domain FDE89_RS15460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDE89_RS15460 PF00672 HAMP domain FDE89_RS15460 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FDE89_RS15460 PF00072 Response regulator receiver domain FDE89_RS15465 PF00291 Pyridoxal-phosphate dependent enzyme FDE89_RS15475 PF05958 tRNA (Uracil-5-)-methyltransferase FDE89_RS15480 PF02824 TGS domain FDE89_RS15480 PF13291 ACT domain FDE89_RS15480 PF04607 Region found in RelA / SpoT proteins FDE89_RS15490 PF03819 MazG nucleotide pyrophosphohydrolase domain FDE89_RS15500 PF01743 Poly A polymerase head domain FDE89_RS15500 PF12626 Polymerase A arginine-rich C-terminus FDE89_RS15500 PF12627 Probable RNA and SrmB- binding site of polymerase A FDE89_RS15505 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FDE89_RS15510 PF02548 Ketopantoate hydroxymethyltransferase FDE89_RS15515 PF02569 Pantoate-beta-alanine ligase FDE89_RS15520 PF03668 P-loop ATPase protein family FDE89_RS15525 PF00381 PTS HPr component phosphorylation site FDE89_RS15530 PF04751 Protein of unknown function (DUF615) FDE89_RS15535 PF13193 AMP-binding enzyme C-terminal domain FDE89_RS15535 PF00501 AMP-binding enzyme FDE89_RS15540 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FDE89_RS15540 PF02824 TGS domain FDE89_RS15540 PF03129 Anticodon binding domain FDE89_RS15540 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FDE89_RS15545 PF00707 Translation initiation factor IF-3, C-terminal domain FDE89_RS15545 PF05198 Translation initiation factor IF-3, N-terminal domain FDE89_RS15555 PF02798 Glutathione S-transferase, N-terminal domain FDE89_RS15555 PF00043 Glutathione S-transferase, C-terminal domain FDE89_RS15560 PF09335 SNARE associated Golgi protein FDE89_RS15565 PF07690 Major Facilitator Superfamily FDE89_RS15570 PF01632 Ribosomal protein L35 FDE89_RS15575 PF00453 Ribosomal protein L20 FDE89_RS15595 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FDE89_RS15595 PF01409 tRNA synthetases class II core domain (F) FDE89_RS15600 PF03483 B3/4 domain FDE89_RS15600 PF03147 Ferredoxin-fold anticodon binding domain FDE89_RS15600 PF03484 tRNA synthetase B5 domain FDE89_RS15600 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FDE89_RS15600 PF01588 Putative tRNA binding domain FDE89_RS15605 PF00216 Bacterial DNA-binding protein FDE89_RS15620 PF07497 Rho termination factor, RNA-binding domain FDE89_RS15620 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FDE89_RS15620 PF07498 Rho termination factor, N-terminal domain FDE89_RS15625 PF00085 Thioredoxin FDE89_RS15630 PF02541 Ppx/GppA phosphatase family FDE89_RS15635 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FDE89_RS15640 PF11734 TilS substrate C-terminal domain FDE89_RS15640 PF01171 PP-loop family FDE89_RS15640 PF09179 TilS substrate binding domain FDE89_RS15645 PF14748 Pyrroline-5-carboxylate reductase dimerisation FDE89_RS15645 PF03807 NADP oxidoreductase coenzyme F420-dependent FDE89_RS15655 PF01367 5'-3' exonuclease, C-terminal SAM fold FDE89_RS15655 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FDE89_RS15655 PF00476 DNA polymerase family A FDE89_RS15655 PF01612 3'-5' exonuclease FDE89_RS15685 PF00437 Type II/IV secretion system protein FDE89_RS15690 PF02566 OsmC-like protein FDE89_RS15695 PF01047 MarR family FDE89_RS15705 PF00795 Carbon-nitrogen hydrolase FDE89_RS15750 PF02566 OsmC-like protein FDE89_RS15755 PF13545 Crp-like helix-turn-helix domain FDE89_RS15755 PF00027 Cyclic nucleotide-binding domain FDE89_RS15760 PF00248 Aldo/keto reductase family FDE89_RS15775 PF00709 Adenylosuccinate synthetase FDE89_RS15780 PF13393 Histidyl-tRNA synthetase FDE89_RS15785 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FDE89_RS15785 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FDE89_RS15790 PF01411 tRNA synthetases class II (A) FDE89_RS15790 PF02272 DHHA1 domain FDE89_RS15790 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FDE89_RS15795 PF00696 Amino acid kinase family FDE89_RS15795 PF01842 ACT domain FDE89_RS15795 PF13840 ACT domain FDE89_RS15800 PF02599 Global regulator protein family FDE89_RS15805 PF01351 Ribonuclease HII FDE89_RS15815 PF01292 Prokaryotic cytochrome b561 FDE89_RS15820 PF00962 Adenosine/AMP deaminase FDE89_RS15825 PF00860 Permease family FDE89_RS15835 PF00743 Flavin-binding monooxygenase-like FDE89_RS15840 PF00106 short chain dehydrogenase FDE89_RS15850 PF17954 Quercetinase C-terminal cupin domain FDE89_RS15850 PF02678 Pirin FDE89_RS15855 PF17932 Tetracyclin repressor-like, C-terminal domain FDE89_RS15855 PF00440 Bacterial regulatory proteins, tetR family FDE89_RS15870 PF01636 Phosphotransferase enzyme family FDE89_RS15880 PF13610 DDE domain FDE89_RS15885 PF13610 DDE domain FDE89_RS15900 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FDE89_RS15900 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDE89_RS15905 PF00764 Arginosuccinate synthase FDE89_RS15910 PF00563 EAL domain FDE89_RS15910 PF00360 Phytochrome region FDE89_RS15910 PF01590 GAF domain FDE89_RS15910 PF00990 Diguanylate cyclase, GGDEF domain FDE89_RS15915 PF01979 Amidohydrolase family FDE89_RS15930 PF07715 TonB-dependent Receptor Plug Domain FDE89_RS15930 PF00593 TonB dependent receptor FDE89_RS15935 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDE89_RS15935 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FDE89_RS15940 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FDE89_RS15940 PF00005 ABC transporter FDE89_RS15945 PF12911 N-terminal TM domain of oligopeptide transport permease C FDE89_RS15945 PF00528 Binding-protein-dependent transport system inner membrane component FDE89_RS15950 PF00528 Binding-protein-dependent transport system inner membrane component FDE89_RS15955 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FDE89_RS15960 PF01476 LysM domain FDE89_RS15960 PF01476 LysM domain FDE89_RS15960 PF01464 Transglycosylase SLT domain FDE89_RS15960 PF01464 Transglycosylase SLT domain FDE89_RS15965 PF00929 Exonuclease FDE89_RS15975 PF09297 NADH pyrophosphatase zinc ribbon domain FDE89_RS15975 PF00293 NUDIX domain FDE89_RS15985 PF04972 BON domain FDE89_RS15990 PF02021 Uncharacterised protein family UPF0102 FDE89_RS15995 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FDE89_RS16005 PF03466 LysR substrate binding domain FDE89_RS16005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDE89_RS16010 PF01810 LysE type translocator FDE89_RS16020 PF13411 MerR HTH family regulatory protein FDE89_RS16030 PF01494 FAD binding domain FDE89_RS16035 PF01494 FAD binding domain FDE89_RS16040 PF00557 Metallopeptidase family M24 FDE89_RS16040 PF05195 Aminopeptidase P, N-terminal domain FDE89_RS16130 PF08525 Opacity-associated protein A N-terminal motif FDE89_RS16130 PF01476 LysM domain FDE89_RS16130 PF01551 Peptidase family M23 FDE89_RS16455 PF01812 5-formyltetrahydrofolate cyclo-ligase family FDE89_RS16460 PF00691 OmpA family FDE89_RS16460 PF04355 SmpA / OmlA family FDE89_RS16465 PF05658 Head domain of trimeric autotransporter adhesin FDE89_RS16465 PF03895 YadA-like membrane anchor domain FDE89_RS16465 PF05662 Coiled stalk of trimeric autotransporter adhesin FDE89_RS16465 PF13018 Extended Signal Peptide of Type V secretion system FDE89_RS16470 PF02190 ATP-dependent protease La (LON) substrate-binding domain FDE89_RS16470 PF00004 ATPase family associated with various cellular activities (AAA) FDE89_RS16470 PF05362 Lon protease (S16) C-terminal proteolytic domain FDE89_RS16475 PF02590 Predicted SPOUT methyltransferase FDE89_RS16480 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase FDE89_RS16490 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FDE89_RS16490 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FDE89_RS16495 PF04060 Putative Fe-S cluster FDE89_RS16500 PF10576 Iron-sulfur binding domain of endonuclease III FDE89_RS16500 PF00730 HhH-GPD superfamily base excision DNA repair protein FDE89_RS16500 PF00633 Helix-hairpin-helix motif FDE89_RS16510 PF05191 Adenylate kinase, active site lid FDE89_RS16525 PF00905 Penicillin binding protein transpeptidase domain FDE89_RS16525 PF03717 Penicillin-binding Protein dimerisation domain FDE89_RS16540 PF02492 CobW/HypB/UreG, nucleotide-binding domain FDE89_RS16545 PF01730 UreF FDE89_RS16550 PF05194 UreE urease accessory protein, C-terminal domain FDE89_RS16550 PF02814 UreE urease accessory protein, N-terminal domain FDE89_RS16555 PF00449 Urease alpha-subunit, N-terminal domain FDE89_RS16555 PF01979 Amidohydrolase family FDE89_RS16560 PF00699 Urease beta subunit FDE89_RS16565 PF00547 Urease, gamma subunit FDE89_RS16570 PF01774 UreD urease accessory protein FDE89_RS16585 PF00463 Isocitrate lyase family FDE89_RS16590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDE89_RS16590 PF03466 LysR substrate binding domain FDE89_RS16595 PF03471 Transporter associated domain FDE89_RS16595 PF01595 Cyclin M transmembrane N-terminal domain FDE89_RS16595 PF00571 CBS domain FDE89_RS16605 PF03600 Citrate transporter FDE89_RS16620 PF00009 Elongation factor Tu GTP binding domain FDE89_RS16625 PF01507 Phosphoadenosine phosphosulfate reductase family FDE89_RS16645 PF14052 Capsule assembly protein Wzi FDE89_RS16650 PF01336 OB-fold nucleic acid binding domain FDE89_RS16650 PF00152 tRNA synthetases class II (D, K and N) FDE89_RS16665 PF00301 Rubredoxin FDE89_RS16670 PF18113 Rubredoxin binding C-terminal domain FDE89_RS16670 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDE89_RS16675 PF00561 alpha/beta hydrolase fold FDE89_RS16680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDE89_RS16680 PF03466 LysR substrate binding domain FDE89_RS16690 PF13089 Polyphosphate kinase N-terminal domain FDE89_RS16690 PF13090 Polyphosphate kinase C-terminal domain 2 FDE89_RS16690 PF02503 Polyphosphate kinase middle domain FDE89_RS16690 PF17941 Polyphosphate kinase C-terminal domain 1 FDE89_RS16695 PF00912 Transglycosylase FDE89_RS16700 PF01694 Rhomboid family FDE89_RS16710 PF00005 ABC transporter FDE89_RS16715 PF13472 GDSL-like Lipase/Acylhydrolase family FDE89_RS16720 PF00484 Carbonic anhydrase FDE89_RS16725 PF00561 alpha/beta hydrolase fold FDE89_RS16735 PF00593 TonB dependent receptor FDE89_RS16735 PF07715 TonB-dependent Receptor Plug Domain FDE89_RS16740 PF01521 Iron-sulphur cluster biosynthesis FDE89_RS16740 PF01106 NifU-like domain FDE89_RS16750 PF00884 Sulfatase FDE89_RS16755 PF03781 Sulfatase-modifying factor enzyme 1 FDE89_RS16770 PF00291 Pyridoxal-phosphate dependent enzyme FDE89_RS16775 PF01384 Phosphate transporter family FDE89_RS16780 PF00809 Pterin binding enzyme FDE89_RS16780 PF02965 Vitamin B12 dependent methionine synthase, activation domain FDE89_RS16780 PF02607 B12 binding domain FDE89_RS16780 PF02310 B12 binding domain FDE89_RS16780 PF02574 Homocysteine S-methyltransferase FDE89_RS16785 PF02780 Transketolase, C-terminal domain FDE89_RS16785 PF02779 Transketolase, pyrimidine binding domain FDE89_RS16790 PF00456 Transketolase, thiamine diphosphate binding domain FDE89_RS16795 PF07690 Major Facilitator Superfamily FDE89_RS16805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDE89_RS16805 PF03466 LysR substrate binding domain FDE89_RS16820 PF01263 Aldose 1-epimerase FDE89_RS16825 PF07690 Major Facilitator Superfamily FDE89_RS16830 PF12833 Helix-turn-helix domain FDE89_RS16830 PF02311 AraC-like ligand binding domain FDE89_RS16835 PF04960 Glutaminase FDE89_RS16840 PF01327 Polypeptide deformylase FDE89_RS16845 PF07690 Major Facilitator Superfamily FDE89_RS16855 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FDE89_RS16855 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FDE89_RS16855 PF00205 Thiamine pyrophosphate enzyme, central domain FDE89_RS16860 PF00171 Aldehyde dehydrogenase family FDE89_RS16865 PF01958 Domain of unknown function DUF108 FDE89_RS16865 PF03447 Homoserine dehydrogenase, NAD binding domain FDE89_RS16875 PF12697 Alpha/beta hydrolase family FDE89_RS16885 PF07690 Major Facilitator Superfamily FDE89_RS16890 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDE89_RS16890 PF14759 Reductase C-terminal FDE89_RS16895 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FDE89_RS16905 PF00355 Rieske [2Fe-2S] domain FDE89_RS16915 PF00355 Rieske [2Fe-2S] domain FDE89_RS16920 PF01614 Bacterial transcriptional regulator FDE89_RS16920 PF09339 IclR helix-turn-helix domain FDE89_RS16935 PF00378 Enoyl-CoA hydratase/isomerase FDE89_RS16945 PF00535 Glycosyl transferase family 2 FDE89_RS16950 PF14883 Hypothetical glycosyl hydrolase family 13 FDE89_RS16950 PF01522 Polysaccharide deacetylase FDE89_RS16955 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FDE89_RS16960 PF07152 YaeQ protein FDE89_RS16965 PF00375 Sodium:dicarboxylate symporter family FDE89_RS16970 PF02492 CobW/HypB/UreG, nucleotide-binding domain FDE89_RS16970 PF07683 Cobalamin synthesis protein cobW C-terminal domain FDE89_RS16980 PF03061 Thioesterase superfamily FDE89_RS16990 PF02028 BCCT, betaine/carnitine/choline family transporter FDE89_RS16995 PF02028 BCCT, betaine/carnitine/choline family transporter FDE89_RS17000 PF00440 Bacterial regulatory proteins, tetR family FDE89_RS17000 PF13977 BetI-type transcriptional repressor, C-terminal FDE89_RS17005 PF00171 Aldehyde dehydrogenase family FDE89_RS17010 PF00732 GMC oxidoreductase FDE89_RS17010 PF05199 GMC oxidoreductase FDE89_RS17015 PF06039 Malate:quinone oxidoreductase (Mqo) FDE89_RS17025 PF02574 Homocysteine S-methyltransferase FDE89_RS17030 PF13520 Amino acid permease FDE89_RS17055 PF01126 Heme oxygenase FDE89_RS17065 PF04575 Protein of unknown function (DUF560) FDE89_RS17075 PF07715 TonB-dependent Receptor Plug Domain FDE89_RS17075 PF00593 TonB dependent receptor FDE89_RS17085 PF04542 Sigma-70 region 2 FDE89_RS17085 PF08281 Sigma-70, region 4 FDE89_RS17095 PF00701 Dihydrodipicolinate synthetase family FDE89_RS17100 PF00083 Sugar (and other) transporter FDE89_RS17120 PF01026 TatD related DNase FDE89_RS17135 PF07693 KAP family P-loop domain FDE89_RS17345 PF05016 ParE toxin of type II toxin-antitoxin system, parDE FDE89_RS17540 PF01695 IstB-like ATP binding protein FDE89_RS17550 PF00145 C-5 cytosine-specific DNA methylase FDE89_RS17630 PF00929 Exonuclease FDE89_RS17700 PF07690 Major Facilitator Superfamily FDE89_RS17705 PF13533 Biotin-lipoyl like FDE89_RS17710 PF03061 Thioesterase superfamily FDE89_RS17715 PF00490 Delta-aminolevulinic acid dehydratase FDE89_RS17720 PF01266 FAD dependent oxidoreductase FDE89_RS17725 PF01370 NAD dependent epimerase/dehydratase family FDE89_RS17725 PF08338 Domain of unknown function (DUF1731) FDE89_RS17745 PF12320 Type 5 capsule protein repressor C-terminal domain FDE89_RS17745 PF00149 Calcineurin-like phosphoesterase FDE89_RS17755 PF01168 Alanine racemase, N-terminal domain FDE89_RS17760 PF00437 Type II/IV secretion system protein FDE89_RS17765 PF00437 Type II/IV secretion system protein FDE89_RS17770 PF01475 Ferric uptake regulator family FDE89_RS17775 PF04355 SmpA / OmlA family FDE89_RS17780 PF03658 RnfH family Ubiquitin FDE89_RS17795 PF01814 Hemerythrin HHE cation binding domain FDE89_RS17800 PF13230 Glutamine amidotransferases class-II FDE89_RS17810 PF00696 Amino acid kinase family FDE89_RS17815 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FDE89_RS17815 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FDE89_RS17815 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FDE89_RS17815 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FDE89_RS17820 PF00692 dUTPase FDE89_RS17825 PF13361 UvrD-like helicase C-terminal domain FDE89_RS17825 PF00580 UvrD/REP helicase N-terminal domain FDE89_RS17830 PF13488 Glycine zipper FDE89_RS17830 PF00691 OmpA family FDE89_RS17835 PF01553 Acyltransferase FDE89_RS17845 PF03775 Septum formation inhibitor MinC, C-terminal domain FDE89_RS17850 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FDE89_RS17855 PF03776 Septum formation topological specificity factor MinE FDE89_RS17870 PF01810 LysE type translocator FDE89_RS17875 PF17854 FtsK alpha domain FDE89_RS17875 PF01580 FtsK/SpoIIIE family FDE89_RS17875 PF09397 Ftsk gamma domain FDE89_RS17875 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FDE89_RS17880 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDE89_RS17885 PF03588 Leucyl/phenylalanyl-tRNA protein transferase FDE89_RS17890 PF04377 Arginine-tRNA-protein transferase, C terminus FDE89_RS17890 PF04376 Arginine-tRNA-protein transferase, N terminus FDE89_RS17895 PF00583 Acetyltransferase (GNAT) family FDE89_RS17910 PF00009 Elongation factor Tu GTP binding domain FDE89_RS17910 PF03144 Elongation factor Tu domain 2 FDE89_RS17910 PF03143 Elongation factor Tu C-terminal domain FDE89_RS17915 PF00679 Elongation factor G C-terminus FDE89_RS17915 PF14492 Elongation Factor G, domain II FDE89_RS17915 PF03144 Elongation factor Tu domain 2 FDE89_RS17915 PF03764 Elongation factor G, domain IV FDE89_RS17915 PF00009 Elongation factor Tu GTP binding domain FDE89_RS17920 PF00177 Ribosomal protein S7p/S5e FDE89_RS17925 PF00164 Ribosomal protein S12/S23 FDE89_RS17935 PF02801 Beta-ketoacyl synthase, C-terminal domain FDE89_RS17935 PF00109 Beta-ketoacyl synthase, N-terminal domain FDE89_RS17940 PF03653 Uncharacterised protein family (UPF0093) FDE89_RS17945 PF02678 Pirin FDE89_RS17945 PF05726 Pirin C-terminal cupin domain FDE89_RS17955 PF02540 NAD synthase FDE89_RS17955 PF00795 Carbon-nitrogen hydrolase FDE89_RS17970 PF00970 Oxidoreductase FAD-binding domain FDE89_RS17970 PF00111 2Fe-2S iron-sulfur cluster binding domain FDE89_RS17970 PF00175 Oxidoreductase NAD-binding domain FDE89_RS17975 PF00171 Aldehyde dehydrogenase family FDE89_RS17980 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FDE89_RS17980 PF00355 Rieske [2Fe-2S] domain FDE89_RS17985 PF07859 alpha/beta hydrolase fold FDE89_RS17990 PF02028 BCCT, betaine/carnitine/choline family transporter FDE89_RS17995 PF00180 Isocitrate/isopropylmalate dehydrogenase FDE89_RS18000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDE89_RS18000 PF03466 LysR substrate binding domain FDE89_RS18020 PF00037 4Fe-4S binding domain FDE89_RS18025 PF01467 Cytidylyltransferase-like FDE89_RS18035 PF03358 NADPH-dependent FMN reductase FDE89_RS18040 PF02578 Multi-copper polyphenol oxidoreductase laccase FDE89_RS18045 PF00849 RNA pseudouridylate synthase FDE89_RS18045 PF01479 S4 domain FDE89_RS18050 PF13525 Outer membrane lipoprotein FDE89_RS18055 PF08275 DNA primase catalytic core, N-terminal domain FDE89_RS18055 PF01807 CHC2 zinc finger FDE89_RS18055 PF08278 DNA primase DnaG DnaB-binding FDE89_RS18055 PF10410 DnaB-helicase binding domain of primase FDE89_RS18060 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain FDE89_RS18060 PF01488 Shikimate / quinate 5-dehydrogenase FDE89_RS18060 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain FDE89_RS18070 PF03550 Outer membrane lipoprotein LolB FDE89_RS18075 PF00288 GHMP kinases N terminal domain FDE89_RS18075 PF08544 GHMP kinases C terminal FDE89_RS18100 PF14572 Phosphoribosyl synthetase-associated domain FDE89_RS18100 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FDE89_RS18105 PF01386 Ribosomal L25p family FDE89_RS18110 PF01195 Peptidyl-tRNA hydrolase FDE89_RS18115 PF02261 Aspartate decarboxylase FDE89_RS18130 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FDE89_RS18140 PF08543 Phosphomethylpyrimidine kinase FDE89_RS18140 PF03070 TENA/THI-4/PQQC family FDE89_RS18140 PF02581 Thiamine monophosphate synthase FDE89_RS18145 PF04972 BON domain FDE89_RS18145 PF01476 LysM domain FDE89_RS18150 PF00550 Phosphopantetheine attachment site FDE89_RS18160 PF00698 Acyl transferase domain FDE89_RS18165 PF01783 Ribosomal L32p protein family FDE89_RS18170 PF02620 Large ribosomal RNA subunit accumulation protein YceD FDE89_RS18175 PF04315 Elongation factor P hydroxylase FDE89_RS18180 PF01300 Telomere recombination FDE89_RS18185 PF02616 Segregation and condensation protein ScpA FDE89_RS18190 PF04079 Segregation and condensation complex subunit ScpB FDE89_RS18195 PF00849 RNA pseudouridylate synthase FDE89_RS18195 PF01479 S4 domain FDE89_RS18210 PF00155 Aminotransferase class I and II FDE89_RS18215 PF04055 Radical SAM superfamily FDE89_RS18215 PF06968 Biotin and Thiamin Synthesis associated domain FDE89_RS18215 PF00202 Aminotransferase class-III FDE89_RS18220 PF08241 Methyltransferase domain FDE89_RS18220 PF12697 Alpha/beta hydrolase family FDE89_RS18225 PF02358 Trehalose-phosphatase FDE89_RS18230 PF00982 Glycosyltransferase family 20 FDE89_RS18235 PF07690 Major Facilitator Superfamily FDE89_RS18240 PF00210 Ferritin-like domain FDE89_RS18245 PF03119 NAD-dependent DNA ligase C4 zinc finger domain FDE89_RS18245 PF03120 NAD-dependent DNA ligase OB-fold domain FDE89_RS18245 PF01653 NAD-dependent DNA ligase adenylation domain FDE89_RS18245 PF00533 BRCA1 C Terminus (BRCT) domain FDE89_RS18245 PF12826 Helix-hairpin-helix motif FDE89_RS18255 PF02463 RecF/RecN/SMC N terminal domain FDE89_RS18255 PF06470 SMC proteins Flexible Hinge Domain FDE89_RS18265 PF01925 Sulfite exporter TauE/SafE FDE89_RS18275 PF03309 Type III pantothenate kinase FDE89_RS18280 PF00448 SRP54-type protein, GTPase domain FDE89_RS18280 PF02881 SRP54-type protein, helical bundle domain FDE89_RS18280 PF02978 Signal peptide binding domain FDE89_RS18290 PF01207 Dihydrouridine synthase (Dus) FDE89_RS18325 PF00692 dUTPase FDE89_RS18340 PF01048 Phosphorylase superfamily FDE89_RS18350 PF10609 NUBPL iron-transfer P-loop NTPase FDE89_RS18360 PF01588 Putative tRNA binding domain FDE89_RS18360 PF09334 tRNA synthetases class I (M) FDE89_RS18385 PF13533 Biotin-lipoyl like FDE89_RS18390 PF00291 Pyridoxal-phosphate dependent enzyme FDE89_RS18405 PF05552 Conserved TM helix FDE89_RS18420 PF00175 Oxidoreductase NAD-binding domain FDE89_RS18420 PF00970 Oxidoreductase FAD-binding domain FDE89_RS18425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDE89_RS18425 PF03466 LysR substrate binding domain FDE89_RS18430 PF00313 'Cold-shock' DNA-binding domain FDE89_RS18440 PF00361 Proton-conducting membrane transporter FDE89_RS18445 PF00361 Proton-conducting membrane transporter FDE89_RS18450 PF00361 Proton-conducting membrane transporter FDE89_RS18450 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FDE89_RS18455 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FDE89_RS18460 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 FDE89_RS18465 PF12838 4Fe-4S dicluster domain FDE89_RS18470 PF00146 NADH dehydrogenase FDE89_RS18475 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FDE89_RS18475 PF00384 Molybdopterin oxidoreductase FDE89_RS18475 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FDE89_RS18480 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FDE89_RS18480 PF10531 SLBB domain FDE89_RS18480 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FDE89_RS18490 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FDE89_RS18490 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FDE89_RS18495 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FDE89_RS18500 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 FDE89_RS18505 PF17151 Periplasmic sensor domain FDE89_RS18505 PF00990 Diguanylate cyclase, GGDEF domain FDE89_RS18515 PF00512 His Kinase A (phospho-acceptor) domain FDE89_RS18515 PF00672 HAMP domain FDE89_RS18515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDE89_RS18520 PF00486 Transcriptional regulatory protein, C terminal FDE89_RS18520 PF00072 Response regulator receiver domain FDE89_RS18530 PF02867 Ribonucleotide reductase, barrel domain FDE89_RS18530 PF00317 Ribonucleotide reductase, all-alpha domain FDE89_RS18530 PF03477 ATP cone domain FDE89_RS18540 PF00268 Ribonucleotide reductase, small chain FDE89_RS18550 PF00672 HAMP domain FDE89_RS18550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDE89_RS18550 PF00512 His Kinase A (phospho-acceptor) domain FDE89_RS18550 PF13755 Sensor N-terminal transmembrane domain FDE89_RS18550 PF13756 Stimulus-sensing domain FDE89_RS18620 PF01011 PQQ enzyme repeat FDE89_RS18620 PF13360 PQQ-like domain FDE89_RS18640 PF02567 Phenazine biosynthesis-like protein FDE89_RS18670 PF01613 Flavin reductase like domain FDE89_RS18675 PF08267 Cobalamin-independent synthase, N-terminal domain FDE89_RS18675 PF01717 Cobalamin-independent synthase, Catalytic domain FDE89_RS18685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDE89_RS18685 PF03466 LysR substrate binding domain FDE89_RS18690 PF01810 LysE type translocator FDE89_RS18700 PF12833 Helix-turn-helix domain FDE89_RS18700 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term FDE89_RS18705 PF07687 Peptidase dimerisation domain FDE89_RS18705 PF01546 Peptidase family M20/M25/M40 FDE89_RS18715 PF03466 LysR substrate binding domain FDE89_RS18715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDE89_RS18725 PF07690 Major Facilitator Superfamily FDE89_RS18735 PF03466 LysR substrate binding domain FDE89_RS18735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDE89_RS18740 PF00890 FAD binding domain FDE89_RS18740 PF14537 Cytochrome c3 FDE89_RS18750 PF02515 CoA-transferase family III FDE89_RS18755 PF07690 Major Facilitator Superfamily FDE89_RS18760 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDE89_RS18760 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDE89_RS18760 PF02770 Acyl-CoA dehydrogenase, middle domain FDE89_RS18765 PF03466 LysR substrate binding domain FDE89_RS18765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDE89_RS18770 PF08240 Alcohol dehydrogenase GroES-like domain FDE89_RS18770 PF00107 Zinc-binding dehydrogenase FDE89_RS18775 PF00962 Adenosine/AMP deaminase FDE89_RS18805 PF02445 Quinolinate synthetase A protein FDE89_RS18810 PF01960 ArgJ family FDE89_RS18815 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FDE89_RS18815 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FDE89_RS18820 PF00893 Small Multidrug Resistance protein FDE89_RS18830 PF05275 Copper resistance protein B precursor (CopB) FDE89_RS18835 PF00394 Multicopper oxidase FDE89_RS18835 PF07731 Multicopper oxidase FDE89_RS18835 PF07732 Multicopper oxidase FDE89_RS18850 PF00834 Ribulose-phosphate 3 epimerase family FDE89_RS18860 PF00756 Putative esterase FDE89_RS18870 PF04445 Putative SAM-dependent methyltransferase FDE89_RS18875 PF00814 Glycoprotease family FDE89_RS18880 PF00132 Bacterial transferase hexapeptide (six repeats) FDE89_RS18885 PF00293 NUDIX domain FDE89_RS18930 PF04715 Anthranilate synthase component I, N terminal region FDE89_RS18930 PF00425 chorismate binding enzyme FDE89_RS18935 PF00155 Aminotransferase class I and II FDE89_RS18940 PF00815 Histidinol dehydrogenase FDE89_RS18945 PF01634 ATP phosphoribosyltransferase FDE89_RS18950 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FDE89_RS18955 PF01722 BolA-like protein FDE89_RS18960 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FDE89_RS18965 PF00309 Sigma-54 factor, Activator interacting domain (AID) FDE89_RS18965 PF04963 Sigma-54 factor, core binding domain FDE89_RS18965 PF04552 Sigma-54, DNA binding domain FDE89_RS19010 PF02566 OsmC-like protein FDE89_RS19060 PF04304 Protein of unknown function (DUF454) FDE89_RS19065 PF00593 TonB dependent receptor FDE89_RS19065 PF07715 TonB-dependent Receptor Plug Domain FDE89_RS19070 PF01126 Heme oxygenase FDE89_RS19075 PF00239 Resolvase, N terminal domain FDE89_RS19075 PF02796 Helix-turn-helix domain of resolvase FDE89_RS19095 PF07715 TonB-dependent Receptor Plug Domain FDE89_RS19095 PF00593 TonB dependent receptor FDE89_RS19125 PF01051 Initiator Replication protein