locus-tag class description CUC60_RS00135 PF00717 Peptidase S24-like CUC60_RS00135 PF01726 LexA DNA binding domain CUC60_RS00190 PF00884 Sulfatase CUC60_RS00190 PF08019 Phosphoethanolamine transferase EptA/EptB CUC60_RS00560 PF01812 5-formyltetrahydrofolate cyclo-ligase family CUC60_RS00565 PF04355 SmpA / OmlA family CUC60_RS00565 PF00691 OmpA family CUC60_RS00575 PF02190 ATP-dependent protease La (LON) substrate-binding domain CUC60_RS00575 PF00004 ATPase family associated with various cellular activities (AAA) CUC60_RS00575 PF05362 Lon protease (S16) C-terminal proteolytic domain CUC60_RS00580 PF02590 Predicted SPOUT methyltransferase CUC60_RS00585 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CUC60_RS00595 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CUC60_RS00595 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CUC60_RS00600 PF04060 Putative Fe-S cluster CUC60_RS00605 PF00633 Helix-hairpin-helix motif CUC60_RS00605 PF10576 Iron-sulfur binding domain of endonuclease III CUC60_RS00605 PF00730 HhH-GPD superfamily base excision DNA repair protein CUC60_RS00615 PF05191 Adenylate kinase, active site lid CUC60_RS00630 PF00905 Penicillin binding protein transpeptidase domain CUC60_RS00630 PF03717 Penicillin-binding Protein dimerisation domain CUC60_RS00645 PF02492 CobW/HypB/UreG, nucleotide-binding domain CUC60_RS00650 PF01730 UreF CUC60_RS00655 PF05194 UreE urease accessory protein, C-terminal domain CUC60_RS00655 PF02814 UreE urease accessory protein, N-terminal domain CUC60_RS00665 PF00699 Urease beta subunit CUC60_RS00670 PF00547 Urease, gamma subunit CUC60_RS00675 PF01774 UreD urease accessory protein CUC60_RS00690 PF00463 Isocitrate lyase family CUC60_RS00695 PF03466 LysR substrate binding domain CUC60_RS00695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUC60_RS00700 PF00571 CBS domain CUC60_RS00700 PF01595 Cyclin M transmembrane N-terminal domain CUC60_RS00700 PF03471 Transporter associated domain CUC60_RS00710 PF03600 Citrate transporter CUC60_RS00725 PF00009 Elongation factor Tu GTP binding domain CUC60_RS00730 PF01507 Phosphoadenosine phosphosulfate reductase family CUC60_RS00740 PF14052 Capsule assembly protein Wzi CUC60_RS00745 PF01336 OB-fold nucleic acid binding domain CUC60_RS00745 PF00152 tRNA synthetases class II (D, K and N) CUC60_RS00760 PF00301 Rubredoxin CUC60_RS00765 PF07992 Pyridine nucleotide-disulphide oxidoreductase CUC60_RS00765 PF18113 Rubredoxin binding C-terminal domain CUC60_RS00770 PF00561 alpha/beta hydrolase fold CUC60_RS00775 PF03466 LysR substrate binding domain CUC60_RS00775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUC60_RS00795 PF13090 Polyphosphate kinase C-terminal domain 2 CUC60_RS00795 PF13089 Polyphosphate kinase N-terminal domain CUC60_RS00795 PF02503 Polyphosphate kinase middle domain CUC60_RS00795 PF17941 Polyphosphate kinase C-terminal domain 1 CUC60_RS00800 PF00912 Transglycosylase CUC60_RS00805 PF01694 Rhomboid family CUC60_RS00815 PF00005 ABC transporter CUC60_RS00820 PF13472 GDSL-like Lipase/Acylhydrolase family CUC60_RS00825 PF00484 Carbonic anhydrase CUC60_RS00830 PF00561 alpha/beta hydrolase fold CUC60_RS00840 PF07715 TonB-dependent Receptor Plug Domain CUC60_RS00840 PF00593 TonB dependent receptor CUC60_RS00845 PF01521 Iron-sulphur cluster biosynthesis CUC60_RS00845 PF01106 NifU-like domain CUC60_RS00855 PF00884 Sulfatase CUC60_RS00875 PF00291 Pyridoxal-phosphate dependent enzyme CUC60_RS00885 PF02310 B12 binding domain CUC60_RS00885 PF02607 B12 binding domain CUC60_RS00885 PF02574 Homocysteine S-methyltransferase CUC60_RS00885 PF00809 Pterin binding enzyme CUC60_RS00885 PF02965 Vitamin B12 dependent methionine synthase, activation domain CUC60_RS00890 PF02780 Transketolase, C-terminal domain CUC60_RS00890 PF02779 Transketolase, pyrimidine binding domain CUC60_RS00895 PF00456 Transketolase, thiamine diphosphate binding domain CUC60_RS00900 PF07690 Major Facilitator Superfamily CUC60_RS00910 PF03466 LysR substrate binding domain CUC60_RS00910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUC60_RS00925 PF01263 Aldose 1-epimerase CUC60_RS00930 PF07690 Major Facilitator Superfamily CUC60_RS00935 PF02311 AraC-like ligand binding domain CUC60_RS00935 PF12833 Helix-turn-helix domain CUC60_RS00940 PF04960 Glutaminase CUC60_RS00945 PF01327 Polypeptide deformylase CUC60_RS00950 PF07690 Major Facilitator Superfamily CUC60_RS00960 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CUC60_RS00960 PF00205 Thiamine pyrophosphate enzyme, central domain CUC60_RS00960 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CUC60_RS00965 PF00171 Aldehyde dehydrogenase family CUC60_RS00970 PF01958 Domain of unknown function DUF108 CUC60_RS00970 PF03447 Homoserine dehydrogenase, NAD binding domain CUC60_RS00980 PF12697 Alpha/beta hydrolase family CUC60_RS00990 PF07690 Major Facilitator Superfamily CUC60_RS00995 PF07992 Pyridine nucleotide-disulphide oxidoreductase CUC60_RS00995 PF14759 Reductase C-terminal CUC60_RS01000 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CUC60_RS01010 PF00355 Rieske [2Fe-2S] domain CUC60_RS01020 PF00355 Rieske [2Fe-2S] domain CUC60_RS01025 PF09339 IclR helix-turn-helix domain CUC60_RS01025 PF01614 Bacterial transcriptional regulator CUC60_RS01040 PF00378 Enoyl-CoA hydratase/isomerase CUC60_RS01050 PF00535 Glycosyl transferase family 2 CUC60_RS01060 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CUC60_RS01065 PF07152 YaeQ protein CUC60_RS01070 PF00375 Sodium:dicarboxylate symporter family CUC60_RS01075 PF02492 CobW/HypB/UreG, nucleotide-binding domain CUC60_RS01075 PF07683 Cobalamin synthesis protein cobW C-terminal domain CUC60_RS01085 PF03061 Thioesterase superfamily CUC60_RS01095 PF02028 BCCT, betaine/carnitine/choline family transporter CUC60_RS01100 PF02028 BCCT, betaine/carnitine/choline family transporter CUC60_RS01105 PF00440 Bacterial regulatory proteins, tetR family CUC60_RS01105 PF13977 BetI-type transcriptional repressor, C-terminal CUC60_RS01110 PF00171 Aldehyde dehydrogenase family CUC60_RS01115 PF05199 GMC oxidoreductase CUC60_RS01115 PF00732 GMC oxidoreductase CUC60_RS01120 PF06039 Malate:quinone oxidoreductase (Mqo) CUC60_RS01130 PF02574 Homocysteine S-methyltransferase CUC60_RS01135 PF13520 Amino acid permease CUC60_RS01160 PF01126 Heme oxygenase CUC60_RS01170 PF04575 Protein of unknown function (DUF560) CUC60_RS01180 PF00593 TonB dependent receptor CUC60_RS01180 PF07715 TonB-dependent Receptor Plug Domain CUC60_RS01190 PF08281 Sigma-70, region 4 CUC60_RS01190 PF04542 Sigma-70 region 2 CUC60_RS01200 PF00701 Dihydrodipicolinate synthetase family CUC60_RS01205 PF00083 Sugar (and other) transporter CUC60_RS01225 PF01026 TatD related DNase CUC60_RS01325 PF00712 DNA polymerase III beta subunit, N-terminal domain CUC60_RS01325 PF02768 DNA polymerase III beta subunit, C-terminal domain CUC60_RS01325 PF02767 DNA polymerase III beta subunit, central domain CUC60_RS01365 PF05016 ParE toxin of type II toxin-antitoxin system, parDE CUC60_RS01515 PF07007 Lysozyme inhibitor LprI CUC60_RS01560 PF01695 IstB-like ATP binding protein CUC60_RS01570 PF00145 C-5 cytosine-specific DNA methylase CUC60_RS01615 PF01381 Helix-turn-helix CUC60_RS01615 PF00717 Peptidase S24-like CUC60_RS01650 PF00929 Exonuclease CUC60_RS01720 PF07690 Major Facilitator Superfamily CUC60_RS01725 PF13533 Biotin-lipoyl like CUC60_RS01730 PF03061 Thioesterase superfamily CUC60_RS01735 PF00490 Delta-aminolevulinic acid dehydratase CUC60_RS01740 PF01266 FAD dependent oxidoreductase CUC60_RS01745 PF01370 NAD dependent epimerase/dehydratase family CUC60_RS01745 PF08338 Domain of unknown function (DUF1731) CUC60_RS01770 PF12320 Type 5 capsule protein repressor C-terminal domain CUC60_RS01770 PF00149 Calcineurin-like phosphoesterase CUC60_RS01780 PF01168 Alanine racemase, N-terminal domain CUC60_RS01785 PF00437 Type II/IV secretion system protein CUC60_RS01790 PF00437 Type II/IV secretion system protein CUC60_RS01795 PF01475 Ferric uptake regulator family CUC60_RS01800 PF04355 SmpA / OmlA family CUC60_RS01805 PF03658 RnfH family Ubiquitin CUC60_RS01820 PF01814 Hemerythrin HHE cation binding domain CUC60_RS01825 PF13230 Glutamine amidotransferases class-II CUC60_RS01835 PF00696 Amino acid kinase family CUC60_RS01840 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CUC60_RS01840 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CUC60_RS01840 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CUC60_RS01840 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CUC60_RS01845 PF00692 dUTPase CUC60_RS01850 PF00580 UvrD/REP helicase N-terminal domain CUC60_RS01850 PF13361 UvrD-like helicase C-terminal domain CUC60_RS01855 PF13488 Glycine zipper CUC60_RS01855 PF00691 OmpA family CUC60_RS01860 PF01553 Acyltransferase CUC60_RS01870 PF03775 Septum formation inhibitor MinC, C-terminal domain CUC60_RS01875 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CUC60_RS01880 PF03776 Septum formation topological specificity factor MinE CUC60_RS01895 PF01810 LysE type translocator CUC60_RS01900 PF17854 FtsK alpha domain CUC60_RS01900 PF09397 Ftsk gamma domain CUC60_RS01900 PF01580 FtsK/SpoIIIE family CUC60_RS01900 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CUC60_RS01905 PF07992 Pyridine nucleotide-disulphide oxidoreductase CUC60_RS01910 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CUC60_RS01915 PF04376 Arginine-tRNA-protein transferase, N terminus CUC60_RS01915 PF04377 Arginine-tRNA-protein transferase, C terminus CUC60_RS01920 PF00583 Acetyltransferase (GNAT) family CUC60_RS01940 PF03144 Elongation factor Tu domain 2 CUC60_RS01940 PF00679 Elongation factor G C-terminus CUC60_RS01940 PF14492 Elongation Factor G, domain II CUC60_RS01940 PF03764 Elongation factor G, domain IV CUC60_RS01940 PF00009 Elongation factor Tu GTP binding domain CUC60_RS01945 PF00177 Ribosomal protein S7p/S5e CUC60_RS01950 PF00164 Ribosomal protein S12/S23 CUC60_RS01960 PF02801 Beta-ketoacyl synthase, C-terminal domain CUC60_RS01960 PF00109 Beta-ketoacyl synthase, N-terminal domain CUC60_RS01965 PF03653 Uncharacterised protein family (UPF0093) CUC60_RS01970 PF02678 Pirin CUC60_RS01970 PF05726 Pirin C-terminal cupin domain CUC60_RS01980 PF02540 NAD synthase CUC60_RS01980 PF00795 Carbon-nitrogen hydrolase CUC60_RS01995 PF00175 Oxidoreductase NAD-binding domain CUC60_RS01995 PF00970 Oxidoreductase FAD-binding domain CUC60_RS01995 PF00111 2Fe-2S iron-sulfur cluster binding domain CUC60_RS02000 PF00171 Aldehyde dehydrogenase family CUC60_RS02005 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CUC60_RS02005 PF00355 Rieske [2Fe-2S] domain CUC60_RS02010 PF07859 alpha/beta hydrolase fold CUC60_RS02015 PF02028 BCCT, betaine/carnitine/choline family transporter CUC60_RS02020 PF00180 Isocitrate/isopropylmalate dehydrogenase CUC60_RS02025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUC60_RS02025 PF03466 LysR substrate binding domain CUC60_RS02045 PF00037 4Fe-4S binding domain CUC60_RS02050 PF01467 Cytidylyltransferase-like CUC60_RS02055 PF01668 SmpB protein CUC60_RS02060 PF03358 NADPH-dependent FMN reductase CUC60_RS02065 PF02578 Multi-copper polyphenol oxidoreductase laccase CUC60_RS02070 PF00849 RNA pseudouridylate synthase CUC60_RS02070 PF01479 S4 domain CUC60_RS02075 PF13525 Outer membrane lipoprotein CUC60_RS02080 PF08275 DNA primase catalytic core, N-terminal domain CUC60_RS02080 PF08278 DNA primase DnaG DnaB-binding CUC60_RS02080 PF01807 CHC2 zinc finger CUC60_RS02080 PF10410 DnaB-helicase binding domain of primase CUC60_RS02085 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CUC60_RS02085 PF01488 Shikimate / quinate 5-dehydrogenase CUC60_RS02085 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CUC60_RS02095 PF03550 Outer membrane lipoprotein LolB CUC60_RS02100 PF08544 GHMP kinases C terminal CUC60_RS02100 PF00288 GHMP kinases N terminal domain CUC60_RS02125 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CUC60_RS02125 PF14572 Phosphoribosyl synthetase-associated domain CUC60_RS02130 PF01386 Ribosomal L25p family CUC60_RS02135 PF01195 Peptidyl-tRNA hydrolase CUC60_RS02140 PF02261 Aspartate decarboxylase CUC60_RS02155 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CUC60_RS02165 PF02581 Thiamine monophosphate synthase CUC60_RS02165 PF03070 TENA/THI-4/PQQC family CUC60_RS02165 PF08543 Phosphomethylpyrimidine kinase CUC60_RS02170 PF01476 LysM domain CUC60_RS02170 PF04972 BON domain CUC60_RS02175 PF00550 Phosphopantetheine attachment site CUC60_RS02185 PF00698 Acyl transferase domain CUC60_RS02190 PF01783 Ribosomal L32p protein family CUC60_RS02195 PF02620 Large ribosomal RNA subunit accumulation protein YceD CUC60_RS02200 PF04315 Elongation factor P hydroxylase CUC60_RS02205 PF01300 Telomere recombination CUC60_RS02210 PF02616 Segregation and condensation protein ScpA CUC60_RS02215 PF04079 Segregation and condensation complex subunit ScpB CUC60_RS02220 PF01479 S4 domain CUC60_RS02220 PF00849 RNA pseudouridylate synthase CUC60_RS02235 PF00155 Aminotransferase class I and II CUC60_RS02240 PF00202 Aminotransferase class-III CUC60_RS02240 PF04055 Radical SAM superfamily CUC60_RS02240 PF06968 Biotin and Thiamin Synthesis associated domain CUC60_RS02245 PF08241 Methyltransferase domain CUC60_RS02245 PF12697 Alpha/beta hydrolase family CUC60_RS02250 PF02358 Trehalose-phosphatase CUC60_RS02255 PF00982 Glycosyltransferase family 20 CUC60_RS02260 PF07690 Major Facilitator Superfamily CUC60_RS02265 PF00210 Ferritin-like domain CUC60_RS02270 PF00533 BRCA1 C Terminus (BRCT) domain CUC60_RS02270 PF12826 Helix-hairpin-helix motif CUC60_RS02270 PF03120 NAD-dependent DNA ligase OB-fold domain CUC60_RS02270 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CUC60_RS02270 PF01653 NAD-dependent DNA ligase adenylation domain CUC60_RS02280 PF06470 SMC proteins Flexible Hinge Domain CUC60_RS02280 PF02463 RecF/RecN/SMC N terminal domain CUC60_RS02290 PF01925 Sulfite exporter TauE/SafE CUC60_RS02300 PF03309 Type III pantothenate kinase CUC60_RS02305 PF02978 Signal peptide binding domain CUC60_RS02305 PF02881 SRP54-type protein, helical bundle domain CUC60_RS02305 PF00448 SRP54-type protein, GTPase domain CUC60_RS02315 PF01207 Dihydrouridine synthase (Dus) CUC60_RS02350 PF00692 dUTPase CUC60_RS02365 PF01048 Phosphorylase superfamily CUC60_RS02375 PF10609 NUBPL iron-transfer P-loop NTPase CUC60_RS02385 PF09334 tRNA synthetases class I (M) CUC60_RS02385 PF01588 Putative tRNA binding domain CUC60_RS02410 PF13533 Biotin-lipoyl like CUC60_RS02415 PF00291 Pyridoxal-phosphate dependent enzyme CUC60_RS02430 PF05552 Conserved TM helix CUC60_RS02445 PF00175 Oxidoreductase NAD-binding domain CUC60_RS02445 PF00970 Oxidoreductase FAD-binding domain CUC60_RS02450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUC60_RS02450 PF03466 LysR substrate binding domain CUC60_RS02455 PF00313 'Cold-shock' DNA-binding domain CUC60_RS02465 PF00361 Proton-conducting membrane transporter CUC60_RS02470 PF00361 Proton-conducting membrane transporter CUC60_RS02475 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CUC60_RS02475 PF00361 Proton-conducting membrane transporter CUC60_RS02480 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CUC60_RS02485 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CUC60_RS02490 PF12838 4Fe-4S dicluster domain CUC60_RS02495 PF00146 NADH dehydrogenase CUC60_RS02500 PF00384 Molybdopterin oxidoreductase CUC60_RS02500 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CUC60_RS02500 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CUC60_RS02505 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CUC60_RS02505 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CUC60_RS02505 PF10531 SLBB domain CUC60_RS02520 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CUC60_RS02525 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CUC60_RS02530 PF00990 Diguanylate cyclase, GGDEF domain CUC60_RS02530 PF17151 Periplasmic sensor domain CUC60_RS02540 PF00512 His Kinase A (phospho-acceptor) domain CUC60_RS02540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CUC60_RS02540 PF00672 HAMP domain CUC60_RS02545 PF00486 Transcriptional regulatory protein, C terminal CUC60_RS02545 PF00072 Response regulator receiver domain CUC60_RS02555 PF03477 ATP cone domain CUC60_RS02555 PF00317 Ribonucleotide reductase, all-alpha domain CUC60_RS02555 PF02867 Ribonucleotide reductase, barrel domain CUC60_RS02565 PF00268 Ribonucleotide reductase, small chain CUC60_RS02645 PF13360 PQQ-like domain CUC60_RS02645 PF01011 PQQ enzyme repeat CUC60_RS02665 PF02567 Phenazine biosynthesis-like protein CUC60_RS02695 PF01613 Flavin reductase like domain CUC60_RS02700 PF01717 Cobalamin-independent synthase, Catalytic domain CUC60_RS02700 PF08267 Cobalamin-independent synthase, N-terminal domain CUC60_RS02710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUC60_RS02710 PF03466 LysR substrate binding domain CUC60_RS02715 PF01810 LysE type translocator CUC60_RS02725 PF12833 Helix-turn-helix domain CUC60_RS02725 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CUC60_RS02730 PF01546 Peptidase family M20/M25/M40 CUC60_RS02730 PF07687 Peptidase dimerisation domain CUC60_RS02740 PF03466 LysR substrate binding domain CUC60_RS02740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUC60_RS02750 PF07690 Major Facilitator Superfamily CUC60_RS02760 PF03466 LysR substrate binding domain CUC60_RS02760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUC60_RS02775 PF02515 CoA-transferase family III CUC60_RS02780 PF07690 Major Facilitator Superfamily CUC60_RS02785 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CUC60_RS02785 PF02770 Acyl-CoA dehydrogenase, middle domain CUC60_RS02785 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CUC60_RS02790 PF03466 LysR substrate binding domain CUC60_RS02790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUC60_RS02795 PF08240 Alcohol dehydrogenase GroES-like domain CUC60_RS02795 PF00107 Zinc-binding dehydrogenase CUC60_RS02800 PF00962 Adenosine/AMP deaminase CUC60_RS02825 PF02445 Quinolinate synthetase A protein CUC60_RS02830 PF01960 ArgJ family CUC60_RS02835 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CUC60_RS02835 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CUC60_RS02860 PF05275 Copper resistance protein B precursor (CopB) CUC60_RS02865 PF07731 Multicopper oxidase CUC60_RS02865 PF07732 Multicopper oxidase CUC60_RS02865 PF00394 Multicopper oxidase CUC60_RS02880 PF00834 Ribulose-phosphate 3 epimerase family CUC60_RS02890 PF00756 Putative esterase CUC60_RS02900 PF04445 Putative SAM-dependent methyltransferase CUC60_RS02905 PF00814 Glycoprotease family CUC60_RS02910 PF00132 Bacterial transferase hexapeptide (six repeats) CUC60_RS02915 PF00293 NUDIX domain CUC60_RS02955 PF04715 Anthranilate synthase component I, N terminal region CUC60_RS02955 PF00425 chorismate binding enzyme CUC60_RS02960 PF00155 Aminotransferase class I and II CUC60_RS02965 PF00815 Histidinol dehydrogenase CUC60_RS02970 PF01634 ATP phosphoribosyltransferase CUC60_RS02975 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CUC60_RS02980 PF01722 BolA-like protein CUC60_RS02985 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CUC60_RS02990 PF04552 Sigma-54, DNA binding domain CUC60_RS02990 PF04963 Sigma-54 factor, core binding domain CUC60_RS02990 PF00309 Sigma-54 factor, Activator interacting domain (AID) CUC60_RS03035 PF00795 Carbon-nitrogen hydrolase CUC60_RS03045 PF01047 MarR family CUC60_RS03050 PF02566 OsmC-like protein CUC60_RS03055 PF00437 Type II/IV secretion system protein CUC60_RS03075 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CUC60_RS03075 PF01367 5'-3' exonuclease, C-terminal SAM fold CUC60_RS03075 PF00476 DNA polymerase family A CUC60_RS03075 PF01612 3'-5' exonuclease CUC60_RS03085 PF14748 Pyrroline-5-carboxylate reductase dimerisation CUC60_RS03085 PF03807 NADP oxidoreductase coenzyme F420-dependent CUC60_RS03090 PF11734 TilS substrate C-terminal domain CUC60_RS03090 PF09179 TilS substrate binding domain CUC60_RS03090 PF01171 PP-loop family CUC60_RS03095 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CUC60_RS03100 PF02541 Ppx/GppA phosphatase family CUC60_RS03105 PF00085 Thioredoxin CUC60_RS03110 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CUC60_RS03110 PF07497 Rho termination factor, RNA-binding domain CUC60_RS03110 PF07498 Rho termination factor, N-terminal domain CUC60_RS03125 PF00216 Bacterial DNA-binding protein CUC60_RS03135 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CUC60_RS03135 PF01409 tRNA synthetases class II core domain (F) CUC60_RS03155 PF00453 Ribosomal protein L20 CUC60_RS03160 PF01632 Ribosomal protein L35 CUC60_RS03165 PF07690 Major Facilitator Superfamily CUC60_RS03170 PF09335 SNARE associated Golgi protein CUC60_RS03175 PF00043 Glutathione S-transferase, C-terminal domain CUC60_RS03175 PF02798 Glutathione S-transferase, N-terminal domain CUC60_RS03185 PF05198 Translation initiation factor IF-3, N-terminal domain CUC60_RS03185 PF00707 Translation initiation factor IF-3, C-terminal domain CUC60_RS03190 PF02824 TGS domain CUC60_RS03190 PF03129 Anticodon binding domain CUC60_RS03190 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CUC60_RS03190 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CUC60_RS03195 PF00501 AMP-binding enzyme CUC60_RS03195 PF13193 AMP-binding enzyme C-terminal domain CUC60_RS03200 PF04751 Protein of unknown function (DUF615) CUC60_RS03205 PF00381 PTS HPr component phosphorylation site CUC60_RS03210 PF03668 P-loop ATPase protein family CUC60_RS03215 PF02569 Pantoate-beta-alanine ligase CUC60_RS03220 PF02548 Ketopantoate hydroxymethyltransferase CUC60_RS03225 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CUC60_RS03230 PF12626 Polymerase A arginine-rich C-terminus CUC60_RS03230 PF01743 Poly A polymerase head domain CUC60_RS03230 PF12627 Probable RNA and SrmB- binding site of polymerase A CUC60_RS03240 PF03819 MazG nucleotide pyrophosphohydrolase domain CUC60_RS03250 PF13291 ACT domain CUC60_RS03250 PF04607 Region found in RelA / SpoT proteins CUC60_RS03250 PF02824 TGS domain CUC60_RS03255 PF05958 tRNA (Uracil-5-)-methyltransferase CUC60_RS03265 PF00291 Pyridoxal-phosphate dependent enzyme CUC60_RS03270 PF00072 Response regulator receiver domain CUC60_RS03270 PF00512 His Kinase A (phospho-acceptor) domain CUC60_RS03270 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CUC60_RS03270 PF01627 Hpt domain CUC60_RS03270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CUC60_RS03270 PF00672 HAMP domain CUC60_RS03275 PF00378 Enoyl-CoA hydratase/isomerase CUC60_RS03280 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CUC60_RS03280 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CUC60_RS03285 PF01261 Xylose isomerase-like TIM barrel CUC60_RS03295 PF00106 short chain dehydrogenase CUC60_RS03300 PF02233 NAD(P) transhydrogenase beta subunit CUC60_RS03305 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CUC60_RS03310 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CUC60_RS03310 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CUC60_RS03315 PF00892 EamA-like transporter family CUC60_RS03325 PF07690 Major Facilitator Superfamily CUC60_RS03330 PF01207 Dihydrouridine synthase (Dus) CUC60_RS03340 PF03466 LysR substrate binding domain CUC60_RS03340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUC60_RS03350 PF00899 ThiF family CUC60_RS03360 PF00694 Aconitase C-terminal domain CUC60_RS03360 PF00330 Aconitase family (aconitate hydratase) CUC60_RS03365 PF01026 TatD related DNase CUC60_RS03380 PF16658 Class II release factor RF3, C-terminal domain CUC60_RS03380 PF00009 Elongation factor Tu GTP binding domain CUC60_RS03380 PF03144 Elongation factor Tu domain 2 CUC60_RS03405 PF00563 EAL domain CUC60_RS03405 PF00990 Diguanylate cyclase, GGDEF domain CUC60_RS03405 PF03707 Bacterial signalling protein N terminal repeat CUC60_RS03410 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CUC60_RS03410 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CUC60_RS03415 PF10369 Small subunit of acetolactate synthase CUC60_RS03420 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CUC60_RS03420 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CUC60_RS03420 PF00205 Thiamine pyrophosphate enzyme, central domain CUC60_RS03430 PF09334 tRNA synthetases class I (M) CUC60_RS03430 PF08264 Anticodon-binding domain of tRNA CUC60_RS03430 PF00133 tRNA synthetases class I (I, L, M and V) CUC60_RS03430 PF13603 Leucyl-tRNA synthetase, Domain 2 CUC60_RS03445 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CUC60_RS03450 PF02687 FtsX-like permease family CUC60_RS03450 PF12704 MacB-like periplasmic core domain CUC60_RS03450 PF00005 ABC transporter CUC60_RS03455 PF02321 Outer membrane efflux protein CUC60_RS03470 PF00929 Exonuclease CUC60_RS03475 PF03193 RsgA GTPase CUC60_RS03485 PF00462 Glutaredoxin CUC60_RS03490 PF02556 Preprotein translocase subunit SecB CUC60_RS03505 PF00109 Beta-ketoacyl synthase, N-terminal domain CUC60_RS03505 PF02801 Beta-ketoacyl synthase, C-terminal domain CUC60_RS03520 PF00109 Beta-ketoacyl synthase, N-terminal domain CUC60_RS03520 PF02801 Beta-ketoacyl synthase, C-terminal domain CUC60_RS03530 PF04820 Tryptophan halogenase CUC60_RS03550 PF00221 Aromatic amino acid lyase CUC60_RS03575 PF00550 Phosphopantetheine attachment site CUC60_RS03580 PF00550 Phosphopantetheine attachment site CUC60_RS03595 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CUC60_RS03595 PF01926 50S ribosome-binding GTPase CUC60_RS03600 PF13360 PQQ-like domain CUC60_RS03610 PF13393 Histidyl-tRNA synthetase CUC60_RS03610 PF03129 Anticodon binding domain CUC60_RS03615 PF04551 GcpE protein CUC60_RS03620 PF13464 Domain of unknown function (DUF4115) CUC60_RS03630 PF04055 Radical SAM superfamily CUC60_RS03635 PF00334 Nucleoside diphosphate kinase CUC60_RS03640 PF04384 Iron-sulphur cluster assembly CUC60_RS03645 PF01569 PAP2 superfamily CUC60_RS03650 PF00534 Glycosyl transferases group 1 CUC60_RS03650 PF13439 Glycosyltransferase Family 4 CUC60_RS03655 PF11818 C-terminal domain of tail specific protease (DUF3340) CUC60_RS03655 PF00595 PDZ domain CUC60_RS03655 PF03572 Peptidase family S41 CUC60_RS03655 PF17804 Tail specific protease N-terminal domain CUC60_RS03660 PF00933 Glycosyl hydrolase family 3 N terminal domain CUC60_RS03670 PF00561 alpha/beta hydrolase fold CUC60_RS03675 PF00171 Aldehyde dehydrogenase family CUC60_RS03680 PF00171 Aldehyde dehydrogenase family CUC60_RS03685 PF01202 Shikimate kinase CUC60_RS03690 PF02447 GntP family permease CUC60_RS03700 PF00920 Dehydratase family CUC60_RS03705 PF00871 Acetokinase family CUC60_RS03710 PF01515 Phosphate acetyl/butaryl transferase CUC60_RS03710 PF07085 DRTGG domain CUC60_RS03715 PF05681 Fumarate hydratase (Fumerase) CUC60_RS03715 PF05683 Fumarase C-terminus CUC60_RS03730 PF10431 C-terminal, D2-small domain, of ClpB protein CUC60_RS03730 PF06689 ClpX C4-type zinc finger CUC60_RS03730 PF07724 AAA domain (Cdc48 subfamily) CUC60_RS03735 PF00574 Clp protease CUC60_RS03740 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CUC60_RS03740 PF05697 Bacterial trigger factor protein (TF) CUC60_RS03740 PF05698 Bacterial trigger factor protein (TF) C-terminus CUC60_RS03745 PF00593 TonB dependent receptor CUC60_RS03745 PF07715 TonB-dependent Receptor Plug Domain CUC60_RS03750 PF18331 PKHD-type hydroxylase C-terminal domain CUC60_RS03750 PF13640 2OG-Fe(II) oxygenase superfamily CUC60_RS03755 PF08502 LeuA allosteric (dimerisation) domain CUC60_RS03755 PF00682 HMGL-like CUC60_RS03760 PF00561 alpha/beta hydrolase fold CUC60_RS03765 PF07021 Methionine biosynthesis protein MetW CUC60_RS03765 PF00561 alpha/beta hydrolase fold CUC60_RS03775 PF01725 Ham1 family CUC60_RS03785 PF02416 mttA/Hcf106 family CUC60_RS03790 PF02416 mttA/Hcf106 family CUC60_RS03795 PF00902 Sec-independent protein translocase protein (TatC) CUC60_RS03815 PF01790 Prolipoprotein diacylglyceryl transferase CUC60_RS03830 PF00303 Thymidylate synthase CUC60_RS03835 PF00186 Dihydrofolate reductase CUC60_RS03845 PF01625 Peptide methionine sulfoxide reductase CUC60_RS03855 PF01618 MotA/TolQ/ExbB proton channel family CUC60_RS03865 PF01842 ACT domain CUC60_RS03865 PF00551 Formyl transferase CUC60_RS03875 PF00171 Aldehyde dehydrogenase family CUC60_RS03880 PF00830 Ribosomal L28 family CUC60_RS03885 PF00471 Ribosomal protein L33 CUC60_RS03890 PF00999 Sodium/hydrogen exchanger family CUC60_RS03890 PF02254 TrkA-N domain CUC60_RS03910 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) CUC60_RS03915 PF13361 UvrD-like helicase C-terminal domain CUC60_RS03915 PF00580 UvrD/REP helicase N-terminal domain CUC60_RS03930 PF01751 Toprim domain CUC60_RS03930 PF01396 Topoisomerase DNA binding C4 zinc finger CUC60_RS03930 PF08272 Topoisomerase I zinc-ribbon-like CUC60_RS03930 PF01131 DNA topoisomerase CUC60_RS03940 PF01638 HxlR-like helix-turn-helix CUC60_RS03945 PF08240 Alcohol dehydrogenase GroES-like domain CUC60_RS03945 PF00107 Zinc-binding dehydrogenase CUC60_RS03950 PF04102 SlyX CUC60_RS03955 PF12848 ABC transporter CUC60_RS03955 PF00005 ABC transporter CUC60_RS03955 PF16326 ABC transporter C-terminal domain CUC60_RS03960 PF01810 LysE type translocator CUC60_RS03965 PF03279 Bacterial lipid A biosynthesis acyltransferase CUC60_RS03975 PF00375 Sodium:dicarboxylate symporter family CUC60_RS03985 PF02774 Semialdehyde dehydrogenase, dimerisation domain CUC60_RS03985 PF01118 Semialdehyde dehydrogenase, NAD binding domain CUC60_RS04005 PF01416 tRNA pseudouridine synthase CUC60_RS04015 PF01176 Translation initiation factor 1A / IF-1 CUC60_RS04030 PF00180 Isocitrate/isopropylmalate dehydrogenase CUC60_RS04045 PF00330 Aconitase family (aconitate hydratase) CUC60_RS04055 PF03466 LysR substrate binding domain CUC60_RS04055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUC60_RS04075 PF00293 NUDIX domain CUC60_RS04080 PF00391 PEP-utilising enzyme, mobile domain CUC60_RS04080 PF05524 PEP-utilising enzyme, N-terminal CUC60_RS04080 PF01590 GAF domain CUC60_RS04080 PF02896 PEP-utilising enzyme, TIM barrel domain CUC60_RS04085 PF00141 Peroxidase CUC60_RS04090 PF12706 Beta-lactamase superfamily domain CUC60_RS04095 PF03466 LysR substrate binding domain CUC60_RS04095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUC60_RS04105 PF02798 Glutathione S-transferase, N-terminal domain CUC60_RS04110 PF13280 WYL domain CUC60_RS04110 PF08279 HTH domain CUC60_RS04115 PF13419 Haloacid dehalogenase-like hydrolase CUC60_RS04120 PF01479 S4 domain CUC60_RS04120 PF00849 RNA pseudouridylate synthase CUC60_RS04130 PF12111 Polyribonucleotide phosphorylase C terminal CUC60_RS04130 PF00575 S1 RNA binding domain CUC60_RS04130 PF10150 Ribonuclease E/G family CUC60_RS04135 PF00501 AMP-binding enzyme CUC60_RS04135 PF13193 AMP-binding enzyme C-terminal domain CUC60_RS04150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUC60_RS04150 PF03466 LysR substrate binding domain CUC60_RS04160 PF06969 HemN C-terminal domain CUC60_RS04160 PF04055 Radical SAM superfamily CUC60_RS04170 PF01554 MatE CUC60_RS04175 PF02770 Acyl-CoA dehydrogenase, middle domain CUC60_RS04175 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CUC60_RS04175 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CUC60_RS04180 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CUC60_RS04180 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CUC60_RS04185 PF03109 ABC1 family CUC60_RS04190 PF01197 Ribosomal protein L31 CUC60_RS04205 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CUC60_RS04225 PF03884 DNA gyrase inhibitor YacG CUC60_RS04230 PF00753 Metallo-beta-lactamase superfamily CUC60_RS04245 PF01177 Asp/Glu/Hydantoin racemase CUC60_RS04260 PF01206 Sulfurtransferase TusA CUC60_RS04265 PF03471 Transporter associated domain CUC60_RS04265 PF00571 CBS domain CUC60_RS04270 PF00795 Carbon-nitrogen hydrolase CUC60_RS04275 PF01588 Putative tRNA binding domain CUC60_RS04285 PF07963 Prokaryotic N-terminal methylation motif CUC60_RS04285 PF08334 Type II secretion system (T2SS), protein G CUC60_RS04290 PF00482 Type II secretion system (T2SS), protein F CUC60_RS04295 PF18074 Primosomal protein N C-terminal domain CUC60_RS04295 PF17764 3′ DNA-binding domain (3′BD) CUC60_RS04295 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CUC60_RS04295 PF00271 Helicase conserved C-terminal domain CUC60_RS04295 PF00270 DEAD/DEAH box helicase CUC60_RS04300 PF02254 TrkA-N domain CUC60_RS04300 PF00999 Sodium/hydrogen exchanger family CUC60_RS04305 PF01430 Hsp33 protein CUC60_RS04315 PF01556 DnaJ C terminal domain CUC60_RS04315 PF00226 DnaJ domain CUC60_RS04325 PF01544 CorA-like Mg2+ transporter protein CUC60_RS04330 PF00575 S1 RNA binding domain CUC60_RS04330 PF03725 3' exoribonuclease family, domain 2 CUC60_RS04330 PF01138 3' exoribonuclease family, domain 1 CUC60_RS04330 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CUC60_RS04330 PF00013 KH domain CUC60_RS04335 PF00312 Ribosomal protein S15 CUC60_RS04340 PF00144 Beta-lactamase CUC60_RS04345 PF13538 UvrD-like helicase C-terminal domain CUC60_RS04350 PF12705 PD-(D/E)XK nuclease superfamily CUC60_RS04350 PF00580 UvrD/REP helicase N-terminal domain CUC60_RS04350 PF13361 UvrD-like helicase C-terminal domain CUC60_RS04355 PF17946 RecC C-terminal domain CUC60_RS04365 PF03976 Polyphosphate kinase 2 (PPK2) CUC60_RS04375 PF01209 ubiE/COQ5 methyltransferase family CUC60_RS04385 PF03109 ABC1 family CUC60_RS04390 PF01494 FAD binding domain CUC60_RS04395 PF01502 Phosphoribosyl-AMP cyclohydrolase CUC60_RS04410 PF13244 Domain of unknown function (DUF4040) CUC60_RS04410 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter CUC60_RS04410 PF00361 Proton-conducting membrane transporter CUC60_RS04410 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CUC60_RS04415 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CUC60_RS04420 PF00361 Proton-conducting membrane transporter CUC60_RS04425 PF01899 Na+/H+ ion antiporter subunit CUC60_RS04430 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) CUC60_RS04435 PF03334 Na+/H+ antiporter subunit CUC60_RS04440 PF02033 Ribosome-binding factor A CUC60_RS04445 PF08364 Bacterial translation initiation factor IF-2 associated region CUC60_RS04445 PF04760 Translation initiation factor IF-2, N-terminal region CUC60_RS04445 PF11987 Translation-initiation factor 2 CUC60_RS04445 PF00009 Elongation factor Tu GTP binding domain CUC60_RS04450 PF08529 NusA N-terminal domain CUC60_RS04450 PF13184 NusA-like KH domain CUC60_RS04450 PF00575 S1 RNA binding domain CUC60_RS04455 PF17384 RimP C-terminal SH3 domain CUC60_RS04455 PF02576 RimP N-terminal domain CUC60_RS04475 PF03840 Preprotein translocase SecG subunit CUC60_RS04480 PF00121 Triosephosphate isomerase CUC60_RS04485 PF00437 Type II/IV secretion system protein CUC60_RS04485 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CUC60_RS04490 PF00482 Type II secretion system (T2SS), protein F CUC60_RS04495 PF06750 Bacterial Peptidase A24 N-terminal domain CUC60_RS04495 PF01478 Type IV leader peptidase family CUC60_RS04500 PF01121 Dephospho-CoA kinase CUC60_RS04510 PF08032 RNA 2'-O ribose methyltransferase substrate binding CUC60_RS04510 PF00588 SpoU rRNA Methylase family CUC60_RS04515 PF06865 Pyrimidine/purine nucleoside phosphorylase CUC60_RS04525 PF02463 RecF/RecN/SMC N terminal domain CUC60_RS04530 PF02622 Uncharacterized ACR, COG1678 CUC60_RS04535 PF03652 Holliday junction resolvase CUC60_RS04540 PF13533 Biotin-lipoyl like CUC60_RS04565 PF02805 Metal binding domain of Ada CUC60_RS04565 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CUC60_RS04565 PF12833 Helix-turn-helix domain CUC60_RS04565 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CUC60_RS04570 PF01066 CDP-alcohol phosphatidyltransferase CUC60_RS04580 PF08459 UvrC Helix-hairpin-helix N-terminal CUC60_RS04580 PF01541 GIY-YIG catalytic domain CUC60_RS04580 PF02151 UvrB/uvrC motif CUC60_RS04605 PF00378 Enoyl-CoA hydratase/isomerase CUC60_RS04605 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CUC60_RS04605 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CUC60_RS04610 PF00108 Thiolase, N-terminal domain CUC60_RS04610 PF02803 Thiolase, C-terminal domain CUC60_RS04630 PF00376 MerR family regulatory protein CUC60_RS04630 PF09278 MerR, DNA binding CUC60_RS04640 PF01323 DSBA-like thioredoxin domain CUC60_RS04655 PF00183 Hsp90 protein CUC60_RS04655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CUC60_RS04670 PF13726 Na+-H+ antiporter family CUC60_RS04670 PF03553 Na+/H+ antiporter family CUC60_RS04675 PF00561 alpha/beta hydrolase fold CUC60_RS04695 PF04997 RNA polymerase Rpb1, domain 1 CUC60_RS04695 PF04998 RNA polymerase Rpb1, domain 5 CUC60_RS04695 PF00623 RNA polymerase Rpb1, domain 2 CUC60_RS04695 PF04983 RNA polymerase Rpb1, domain 3 CUC60_RS04695 PF05000 RNA polymerase Rpb1, domain 4 CUC60_RS04700 PF04563 RNA polymerase beta subunit CUC60_RS04700 PF04560 RNA polymerase Rpb2, domain 7 CUC60_RS04700 PF00562 RNA polymerase Rpb2, domain 6 CUC60_RS04700 PF10385 RNA polymerase beta subunit external 1 domain CUC60_RS04700 PF04561 RNA polymerase Rpb2, domain 2 CUC60_RS04700 PF04565 RNA polymerase Rpb2, domain 3 CUC60_RS04705 PF16320 Ribosomal protein L7/L12 dimerisation domain CUC60_RS04705 PF00542 Ribosomal protein L7/L12 C-terminal domain CUC60_RS04710 PF00466 Ribosomal protein L10 CUC60_RS04715 PF00687 Ribosomal protein L1p/L10e family CUC60_RS04720 PF03946 Ribosomal protein L11, N-terminal domain CUC60_RS04720 PF00298 Ribosomal protein L11, RNA binding domain CUC60_RS04725 PF00467 KOW motif CUC60_RS04725 PF02357 Transcription termination factor nusG CUC60_RS04730 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CUC60_RS04740 PF03144 Elongation factor Tu domain 2 CUC60_RS04740 PF03143 Elongation factor Tu C-terminal domain CUC60_RS04740 PF00009 Elongation factor Tu GTP binding domain CUC60_RS04765 PF00425 chorismate binding enzyme CUC60_RS04765 PF04715 Anthranilate synthase component I, N terminal region CUC60_RS04770 PF13419 Haloacid dehalogenase-like hydrolase CUC60_RS04775 PF00498 FHA domain CUC60_RS04775 PF12401 Protein of unknown function (DUF2662) CUC60_RS04780 PF00263 Bacterial type II and III secretion system protein CUC60_RS04780 PF03958 Bacterial type II/III secretion system short domain CUC60_RS04795 PF00816 H-NS histone family CUC60_RS04820 PF03900 Porphobilinogen deaminase, C-terminal domain CUC60_RS04820 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CUC60_RS04825 PF00072 Response regulator receiver domain CUC60_RS04825 PF04397 LytTr DNA-binding domain CUC60_RS04830 PF06580 Histidine kinase CUC60_RS04830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CUC60_RS04830 PF07694 5TMR of 5TMR-LYT CUC60_RS04835 PF14698 Argininosuccinate lyase C-terminal CUC60_RS04835 PF00206 Lyase CUC60_RS04840 PF04362 Bacterial Fe(2+) trafficking CUC60_RS04845 PF01895 PhoU domain CUC60_RS04850 PF02321 Outer membrane efflux protein CUC60_RS04855 PF00892 EamA-like transporter family CUC60_RS04870 PF01964 Radical SAM ThiC family CUC60_RS04870 PF13667 ThiC-associated domain CUC60_RS04875 PF00293 NUDIX domain CUC60_RS04880 PF00149 Calcineurin-like phosphoesterase CUC60_RS04885 PF01258 Prokaryotic dksA/traR C4-type zinc finger CUC60_RS04890 PF00749 tRNA synthetases class I (E and Q), catalytic domain CUC60_RS04895 PF01098 Cell cycle protein CUC60_RS04900 PF08245 Mur ligase middle domain CUC60_RS04900 PF02875 Mur ligase family, glutamate ligase domain CUC60_RS04920 PF00589 Phage integrase family CUC60_RS04920 PF02899 Phage integrase, N-terminal SAM-like domain CUC60_RS04925 PF13098 Thioredoxin-like domain CUC60_RS04925 PF10411 Disulfide bond isomerase protein N-terminus CUC60_RS04930 PF01842 ACT domain CUC60_RS04930 PF00742 Homoserine dehydrogenase CUC60_RS04930 PF03447 Homoserine dehydrogenase, NAD binding domain CUC60_RS04935 PF00291 Pyridoxal-phosphate dependent enzyme CUC60_RS04940 PF00768 D-alanyl-D-alanine carboxypeptidase CUC60_RS04945 PF00072 Response regulator receiver domain CUC60_RS04945 PF00196 Bacterial regulatory proteins, luxR family CUC60_RS04950 PF00512 His Kinase A (phospho-acceptor) domain CUC60_RS04950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CUC60_RS04955 PF02954 Bacterial regulatory protein, Fis family CUC60_RS04955 PF00072 Response regulator receiver domain CUC60_RS04955 PF00158 Sigma-54 interaction domain CUC60_RS04960 PF00595 PDZ domain CUC60_RS04960 PF03572 Peptidase family S41 CUC60_RS04980 PF02789 Cytosol aminopeptidase family, N-terminal domain CUC60_RS04980 PF00883 Cytosol aminopeptidase family, catalytic domain CUC60_RS05000 PF00677 Lumazine binding domain CUC60_RS05010 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CUC60_RS05010 PF01872 RibD C-terminal domain CUC60_RS05015 PF03477 ATP cone domain CUC60_RS05020 PF00909 Ammonium Transporter Family CUC60_RS05025 PF00543 Nitrogen regulatory protein P-II CUC60_RS05035 PF01078 Magnesium chelatase, subunit ChlI CUC60_RS05035 PF13335 Magnesium chelatase, subunit ChlI C-terminal CUC60_RS05045 PF01636 Phosphotransferase enzyme family CUC60_RS05050 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase CUC60_RS05070 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CUC60_RS05070 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CUC60_RS05070 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CUC60_RS05070 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CUC60_RS05090 PF13614 AAA domain CUC60_RS05095 PF08535 KorB domain CUC60_RS05095 PF06613 KorB C-terminal beta-barrel domain CUC60_RS05095 PF02195 ParB-like nuclease domain CUC60_RS05160 PF13495 Phage integrase, N-terminal SAM-like domain CUC60_RS05160 PF00589 Phage integrase family CUC60_RS05170 PF07690 Major Facilitator Superfamily CUC60_RS05180 PF00893 Small Multidrug Resistance protein CUC60_RS05185 PF00809 Pterin binding enzyme CUC60_RS05310 PF13610 DDE domain CUC60_RS05320 PF00239 Resolvase, N terminal domain CUC60_RS05320 PF02796 Helix-turn-helix domain of resolvase CUC60_RS05345 PF02909 Tetracyclin repressor-like, C-terminal domain CUC60_RS05345 PF00440 Bacterial regulatory proteins, tetR family CUC60_RS05350 PF07690 Major Facilitator Superfamily CUC60_RS05395 PF00582 Universal stress protein family CUC60_RS05440 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CUC60_RS05440 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CUC60_RS05440 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CUC60_RS05440 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CUC60_RS05445 PF00809 Pterin binding enzyme CUC60_RS05465 PF00665 Integrase core domain CUC60_RS05490 PF02899 Phage integrase, N-terminal SAM-like domain CUC60_RS05490 PF00589 Phage integrase family CUC60_RS05525 PF00582 Universal stress protein family CUC60_RS05545 PF00665 Integrase core domain CUC60_RS05555 PF13335 Magnesium chelatase, subunit ChlI C-terminal CUC60_RS05555 PF01078 Magnesium chelatase, subunit ChlI CUC60_RS05560 PF00155 Aminotransferase class I and II CUC60_RS05560 PF00392 Bacterial regulatory proteins, gntR family CUC60_RS05570 PF00701 Dihydrodipicolinate synthetase family CUC60_RS05580 PF03573 outer membrane porin, OprD family CUC60_RS05585 PF00719 Inorganic pyrophosphatase CUC60_RS05600 PF00501 AMP-binding enzyme CUC60_RS05600 PF13193 AMP-binding enzyme C-terminal domain CUC60_RS05605 PF00521 DNA gyrase/topoisomerase IV, subunit A CUC60_RS05605 PF03989 DNA gyrase C-terminal domain, beta-propeller CUC60_RS05610 PF07690 Major Facilitator Superfamily CUC60_RS05615 PF03458 UPF0126 domain CUC60_RS05620 PF02810 SEC-C motif CUC60_RS05625 PF03741 Integral membrane protein TerC family CUC60_RS05625 PF03471 Transporter associated domain CUC60_RS05630 PF03641 Possible lysine decarboxylase CUC60_RS05635 PF07690 Major Facilitator Superfamily CUC60_RS05645 PF11798 IMS family HHH motif CUC60_RS05645 PF11799 impB/mucB/samB family C-terminal domain CUC60_RS05645 PF00817 impB/mucB/samB family CUC60_RS05660 PF08497 Radical SAM N-terminal CUC60_RS05660 PF11842 Domain of unknown function (DUF3362) CUC60_RS05660 PF04055 Radical SAM superfamily CUC60_RS05680 PF03358 NADPH-dependent FMN reductase CUC60_RS05690 PF00291 Pyridoxal-phosphate dependent enzyme CUC60_RS05725 PF00440 Bacterial regulatory proteins, tetR family CUC60_RS05750 PF01327 Polypeptide deformylase CUC60_RS05760 PF17782 DprA winged helix domain CUC60_RS05760 PF02481 DNA recombination-mediator protein A CUC60_RS05765 PF01300 Telomere recombination CUC60_RS05770 PF00892 EamA-like transporter family CUC60_RS05775 PF00440 Bacterial regulatory proteins, tetR family CUC60_RS05780 PF07690 Major Facilitator Superfamily CUC60_RS05790 PF00255 Glutathione peroxidase CUC60_RS05800 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CUC60_RS05805 PF02874 ATP synthase alpha/beta family, beta-barrel domain CUC60_RS05805 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CUC60_RS05810 PF00231 ATP synthase CUC60_RS05815 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CUC60_RS05815 PF00306 ATP synthase alpha/beta chain, C terminal domain CUC60_RS05815 PF02874 ATP synthase alpha/beta family, beta-barrel domain CUC60_RS05820 PF00213 ATP synthase delta (OSCP) subunit CUC60_RS05825 PF00430 ATP synthase B/B' CF(0) CUC60_RS05830 PF00137 ATP synthase subunit C CUC60_RS05835 PF00119 ATP synthase A chain CUC60_RS05860 PF00950 ABC 3 transport family CUC60_RS05865 PF01810 LysE type translocator CUC60_RS05870 PF04261 Dyp-type peroxidase family CUC60_RS05875 PF03949 Malic enzyme, NAD binding domain CUC60_RS05875 PF00390 Malic enzyme, N-terminal domain CUC60_RS05880 PF00750 tRNA synthetases class I (R) CUC60_RS05880 PF03485 Arginyl tRNA synthetase N terminal domain CUC60_RS05880 PF05746 DALR anticodon binding domain CUC60_RS05900 PF02678 Pirin CUC60_RS05900 PF05726 Pirin C-terminal cupin domain CUC60_RS05910 PF03551 Transcriptional regulator PadR-like family CUC60_RS05915 PF13427 Domain of unknown function (DUF4111) CUC60_RS05915 PF01909 Nucleotidyltransferase domain CUC60_RS05920 PF02540 NAD synthase CUC60_RS05920 PF00117 Glutamine amidotransferase class-I CUC60_RS05920 PF00958 GMP synthase C terminal domain CUC60_RS05930 PF07681 DoxX CUC60_RS05935 PF09335 SNARE associated Golgi protein CUC60_RS05950 PF13614 AAA domain CUC60_RS05960 PF01722 BolA-like protein CUC60_RS05975 PF01648 4'-phosphopantetheinyl transferase superfamily CUC60_RS05980 PF12697 Alpha/beta hydrolase family CUC60_RS05995 PF00975 Thioesterase domain CUC60_RS05995 PF00668 Condensation domain CUC60_RS05995 PF00501 AMP-binding enzyme CUC60_RS05995 PF00550 Phosphopantetheine attachment site CUC60_RS05995 PF13193 AMP-binding enzyme C-terminal domain CUC60_RS06000 PF08242 Methyltransferase domain CUC60_RS06000 PF16197 Ketoacyl-synthetase C-terminal extension CUC60_RS06000 PF00109 Beta-ketoacyl synthase, N-terminal domain CUC60_RS06000 PF02801 Beta-ketoacyl synthase, C-terminal domain CUC60_RS06000 PF00550 Phosphopantetheine attachment site CUC60_RS06000 PF14765 Polyketide synthase dehydratase CUC60_RS06000 PF00975 Thioesterase domain CUC60_RS06005 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CUC60_RS06005 PF02770 Acyl-CoA dehydrogenase, middle domain CUC60_RS06005 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CUC60_RS06010 PF00501 AMP-binding enzyme CUC60_RS06015 PF00196 Bacterial regulatory proteins, luxR family CUC60_RS06015 PF03472 Autoinducer binding domain CUC60_RS06025 PF00765 Autoinducer synthase CUC60_RS06035 PF00378 Enoyl-CoA hydratase/isomerase CUC60_RS06040 PF00378 Enoyl-CoA hydratase/isomerase CUC60_RS06045 PF02770 Acyl-CoA dehydrogenase, middle domain CUC60_RS06045 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CUC60_RS06045 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CUC60_RS06050 PF00501 AMP-binding enzyme CUC60_RS06050 PF13193 AMP-binding enzyme C-terminal domain CUC60_RS06055 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CUC60_RS06055 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CUC60_RS06060 PF00171 Aldehyde dehydrogenase family CUC60_RS06070 PF00324 Amino acid permease CUC60_RS06075 PF00324 Amino acid permease CUC60_RS06080 PF01042 Endoribonuclease L-PSP CUC60_RS06085 PF01168 Alanine racemase, N-terminal domain CUC60_RS06085 PF00842 Alanine racemase, C-terminal domain CUC60_RS06090 PF01266 FAD dependent oxidoreductase CUC60_RS06095 PF01037 Lrp/AsnC ligand binding domain CUC60_RS06105 PF07715 TonB-dependent Receptor Plug Domain CUC60_RS06105 PF00593 TonB dependent receptor CUC60_RS06120 PF00849 RNA pseudouridylate synthase CUC60_RS06165 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) CUC60_RS06165 PF04717 Type VI secretion system, phage-baseplate injector CUC60_RS06165 PF13296 Putative type VI secretion system Rhs element Vgr CUC60_RS06175 PF02801 Beta-ketoacyl synthase, C-terminal domain CUC60_RS06175 PF00109 Beta-ketoacyl synthase, N-terminal domain CUC60_RS06180 PF13333 Integrase core domain CUC60_RS06180 PF00665 Integrase core domain CUC60_RS06180 PF13276 HTH-like domain CUC60_RS06220 PF00694 Aconitase C-terminal domain CUC60_RS06220 PF00330 Aconitase family (aconitate hydratase) CUC60_RS06225 PF00285 Citrate synthase, C-terminal domain CUC60_RS06235 PF00392 Bacterial regulatory proteins, gntR family CUC60_RS06235 PF07729 FCD domain CUC60_RS06245 PF00155 Aminotransferase class I and II CUC60_RS06250 PF09330 D-lactate dehydrogenase, membrane binding CUC60_RS06250 PF01565 FAD binding domain CUC60_RS06255 PF01070 FMN-dependent dehydrogenase CUC60_RS06260 PF00392 Bacterial regulatory proteins, gntR family CUC60_RS06260 PF07729 FCD domain CUC60_RS06265 PF02652 L-lactate permease CUC60_RS06270 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CUC60_RS06270 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CUC60_RS06270 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CUC60_RS06270 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CUC60_RS06275 PF16363 GDP-mannose 4,6 dehydratase CUC60_RS06285 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CUC60_RS06285 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CUC60_RS06285 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CUC60_RS06290 PF00483 Nucleotidyl transferase CUC60_RS06295 PF02719 Polysaccharide biosynthesis protein CUC60_RS06305 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CUC60_RS06305 PF00953 Glycosyl transferase family 4 CUC60_RS06310 PF01370 NAD dependent epimerase/dehydratase family CUC60_RS06315 PF13579 Glycosyl transferase 4-like domain CUC60_RS06320 PF02350 UDP-N-acetylglucosamine 2-epimerase CUC60_RS06325 PF01370 NAD dependent epimerase/dehydratase family CUC60_RS06330 PF08485 Polysaccharide biosynthesis protein C-terminal CUC60_RS06330 PF02719 Polysaccharide biosynthesis protein CUC60_RS06370 PF02348 Cytidylyltransferase CUC60_RS06375 PF00483 Nucleotidyl transferase CUC60_RS06385 PF03102 NeuB family CUC60_RS06385 PF08666 SAF domain CUC60_RS06390 PF02350 UDP-N-acetylglucosamine 2-epimerase CUC60_RS06395 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CUC60_RS06400 PF02719 Polysaccharide biosynthesis protein CUC60_RS06405 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CUC60_RS06405 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CUC60_RS06405 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CUC60_RS06410 PF02563 Polysaccharide biosynthesis/export protein CUC60_RS06410 PF18412 Outer-membrane lipoprotein Wza C-terminal domain CUC60_RS06410 PF10531 SLBB domain CUC60_RS06415 PF01451 Low molecular weight phosphotyrosine protein phosphatase CUC60_RS06425 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CUC60_RS06425 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CUC60_RS06430 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CUC60_RS06430 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CUC60_RS06435 PF03023 Lipid II flippase MurJ CUC60_RS06440 PF01510 N-acetylmuramoyl-L-alanine amidase CUC60_RS06445 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CUC60_RS06445 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CUC60_RS06455 PF05506 Domain of unknown function (DUF756) CUC60_RS06455 PF04185 Phosphoesterase family CUC60_RS06460 PF03725 3' exoribonuclease family, domain 2 CUC60_RS06460 PF01138 3' exoribonuclease family, domain 1 CUC60_RS06465 PF00487 Fatty acid desaturase CUC60_RS06470 PF00175 Oxidoreductase NAD-binding domain CUC60_RS06475 PF00440 Bacterial regulatory proteins, tetR family CUC60_RS06480 PF00440 Bacterial regulatory proteins, tetR family CUC60_RS06480 PF08360 QacR-like protein, C-terminal region CUC60_RS06485 PF01323 DSBA-like thioredoxin domain CUC60_RS06495 PF13419 Haloacid dehalogenase-like hydrolase CUC60_RS06500 PF00106 short chain dehydrogenase CUC60_RS06515 PF00696 Amino acid kinase family CUC60_RS06515 PF00583 Acetyltransferase (GNAT) family CUC60_RS06520 PF09084 NMT1/THI5 like CUC60_RS06525 PF09084 NMT1/THI5 like CUC60_RS06530 PF00296 Luciferase-like monooxygenase CUC60_RS06535 PF00528 Binding-protein-dependent transport system inner membrane component CUC60_RS06540 PF00005 ABC transporter CUC60_RS06545 PF08362 YcdC-like protein, C-terminal region CUC60_RS06545 PF00440 Bacterial regulatory proteins, tetR family CUC60_RS06550 PF01048 Phosphorylase superfamily CUC60_RS06560 PF01687 Riboflavin kinase CUC60_RS06560 PF06574 FAD synthetase CUC60_RS06565 PF06827 Zinc finger found in FPG and IleRS CUC60_RS06565 PF08264 Anticodon-binding domain of tRNA CUC60_RS06565 PF00133 tRNA synthetases class I (I, L, M and V) CUC60_RS06570 PF01252 Signal peptidase (SPase) II CUC60_RS06575 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CUC60_RS06620 PF00579 tRNA synthetases class I (W and Y) CUC60_RS06625 PF03702 Anhydro-N-acetylmuramic acid kinase CUC60_RS06630 PF00561 alpha/beta hydrolase fold CUC60_RS06635 PF01521 Iron-sulphur cluster biosynthesis CUC60_RS06655 PF00005 ABC transporter CUC60_RS06655 PF12848 ABC transporter CUC60_RS06660 PF09335 SNARE associated Golgi protein CUC60_RS06670 PF00204 DNA gyrase B CUC60_RS06670 PF18053 DNA gyrase B subunit insert domain CUC60_RS06670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CUC60_RS06670 PF01751 Toprim domain CUC60_RS06670 PF00986 DNA gyrase B subunit, carboxyl terminus CUC60_RS06675 PF02463 RecF/RecN/SMC N terminal domain CUC60_RS06680 PF02768 DNA polymerase III beta subunit, C-terminal domain CUC60_RS06680 PF02767 DNA polymerase III beta subunit, central domain CUC60_RS06680 PF00712 DNA polymerase III beta subunit, N-terminal domain CUC60_RS06685 PF00308 Bacterial dnaA protein CUC60_RS06685 PF08299 Bacterial dnaA protein helix-turn-helix CUC60_RS06685 PF11638 DnaA N-terminal domain CUC60_RS06690 PF00468 Ribosomal protein L34 CUC60_RS06695 PF00825 Ribonuclease P CUC60_RS06700 PF01809 Putative membrane protein insertion efficiency factor CUC60_RS06705 PF02096 60Kd inner membrane protein CUC60_RS06705 PF14849 YidC periplasmic domain CUC60_RS06710 PF10396 GTP-binding protein TrmE N-terminus CUC60_RS06710 PF12631 MnmE helical domain CUC60_RS06710 PF01926 50S ribosome-binding GTPase CUC60_RS06715 PF02583 Metal-sensitive transcriptional repressor CUC60_RS06720 PF01545 Cation efflux family CUC60_RS06720 PF16916 Dimerisation domain of Zinc Transporter CUC60_RS06725 PF13098 Thioredoxin-like domain CUC60_RS06725 PF10411 Disulfide bond isomerase protein N-terminus CUC60_RS06735 PF00156 Phosphoribosyl transferase domain CUC60_RS06745 PF00355 Rieske [2Fe-2S] domain CUC60_RS06750 PF03738 Glutathionylspermidine synthase preATP-grasp CUC60_RS06760 PF03741 Integral membrane protein TerC family CUC60_RS06765 PF01569 PAP2 superfamily CUC60_RS06775 PF08245 Mur ligase middle domain CUC60_RS06775 PF02875 Mur ligase family, glutamate ligase domain CUC60_RS06775 PF01225 Mur ligase family, catalytic domain CUC60_RS06790 PF00731 AIR carboxylase CUC60_RS06795 PF02222 ATP-grasp domain CUC60_RS06795 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CUC60_RS06800 PF13406 Transglycosylase SLT domain CUC60_RS06825 PF01025 GrpE CUC60_RS06850 PF07859 alpha/beta hydrolase fold CUC60_RS06855 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CUC60_RS06895 PF00209 Sodium:neurotransmitter symporter family CUC60_RS06905 PF01189 16S rRNA methyltransferase RsmB/F CUC60_RS06905 PF01029 NusB family CUC60_RS06910 PF02911 Formyl transferase, C-terminal domain CUC60_RS06910 PF00551 Formyl transferase CUC60_RS06915 PF00920 Dehydratase family CUC60_RS06930 PF03466 LysR substrate binding domain CUC60_RS06930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUC60_RS06935 PF00860 Permease family CUC60_RS06940 PF00311 Phosphoenolpyruvate carboxylase CUC60_RS06945 PF00440 Bacterial regulatory proteins, tetR family CUC60_RS06945 PF08361 MAATS-type transcriptional repressor, C-terminal region CUC60_RS06950 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CUC60_RS06955 PF00873 AcrB/AcrD/AcrF family CUC60_RS06965 PF00684 DnaJ central domain CUC60_RS06965 PF01556 DnaJ C terminal domain CUC60_RS06965 PF00226 DnaJ domain CUC60_RS06975 PF01113 Dihydrodipicolinate reductase, N-terminus CUC60_RS06975 PF05173 Dihydrodipicolinate reductase, C-terminus CUC60_RS06985 PF07690 Major Facilitator Superfamily CUC60_RS06990 PF00248 Aldo/keto reductase family CUC60_RS06995 PF03466 LysR substrate binding domain CUC60_RS06995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUC60_RS07010 PF00155 Aminotransferase class I and II CUC60_RS07010 PF00392 Bacterial regulatory proteins, gntR family CUC60_RS07015 PF00107 Zinc-binding dehydrogenase CUC60_RS07015 PF08240 Alcohol dehydrogenase GroES-like domain CUC60_RS07020 PF03352 Methyladenine glycosylase CUC60_RS07035 PF10576 Iron-sulfur binding domain of endonuclease III CUC60_RS07035 PF00633 Helix-hairpin-helix motif CUC60_RS07035 PF00730 HhH-GPD superfamily base excision DNA repair protein CUC60_RS07035 PF14815 NUDIX domain CUC60_RS07050 PF07043 Protein of unknown function (DUF1328) CUC60_RS07055 PF03692 Putative zinc- or iron-chelating domain CUC60_RS07060 PF07995 Glucose / Sorbosone dehydrogenase CUC60_RS07065 PF16193 AAA C-terminal domain CUC60_RS07065 PF12002 MgsA AAA+ ATPase C terminal CUC60_RS07065 PF00004 ATPase family associated with various cellular activities (AAA) CUC60_RS07070 PF01226 Formate/nitrite transporter CUC60_RS07080 PF01259 SAICAR synthetase CUC60_RS07090 PF00701 Dihydrodipicolinate synthetase family CUC60_RS07095 PF00857 Isochorismatase family CUC60_RS07100 PF01758 Sodium Bile acid symporter family CUC60_RS07105 PF01554 MatE CUC60_RS07110 PF04463 Protein of unknown function (DUF523) CUC60_RS07115 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CUC60_RS07125 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CUC60_RS07130 PF02798 Glutathione S-transferase, N-terminal domain CUC60_RS07130 PF14497 Glutathione S-transferase, C-terminal domain CUC60_RS07140 PF00324 Amino acid permease CUC60_RS07150 PF02492 CobW/HypB/UreG, nucleotide-binding domain CUC60_RS07150 PF07683 Cobalamin synthesis protein cobW C-terminal domain CUC60_RS07165 PF05962 HutD CUC60_RS07170 PF01175 Urocanase Rossmann-like domain CUC60_RS07170 PF17391 Urocanase N-terminal domain CUC60_RS07170 PF17392 Urocanase C-terminal domain CUC60_RS07175 PF00221 Aromatic amino acid lyase CUC60_RS07180 PF00324 Amino acid permease CUC60_RS07185 PF01979 Amidohydrolase family CUC60_RS07190 PF00491 Arginase family CUC60_RS07205 PF01177 Asp/Glu/Hydantoin racemase CUC60_RS07215 PF01381 Helix-turn-helix CUC60_RS07225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CUC60_RS07225 PF00512 His Kinase A (phospho-acceptor) domain CUC60_RS07225 PF08448 PAS fold CUC60_RS07225 PF13426 PAS domain CUC60_RS07225 PF00072 Response regulator receiver domain CUC60_RS07230 PF00145 C-5 cytosine-specific DNA methylase CUC60_RS07240 PF06527 TniQ CUC60_RS07240 PF15978 Tn7-like transposition protein D CUC60_RS07245 PF13401 AAA domain CUC60_RS07245 PF11426 Tn7 transposition regulator TnsC CUC60_RS07250 PF00665 Integrase core domain CUC60_RS07255 PF08722 TnsA endonuclease N terminal CUC60_RS07255 PF08721 TnsA endonuclease C terminal CUC60_RS07260 PF01380 SIS domain CUC60_RS07265 PF12804 MobA-like NTP transferase domain CUC60_RS07265 PF14602 Hexapeptide repeat of succinyl-transferase CUC60_RS07265 PF00132 Bacterial transferase hexapeptide (six repeats) CUC60_RS07270 PF04608 Phosphatidylglycerophosphatase A CUC60_RS07275 PF02769 AIR synthase related protein, C-terminal domain CUC60_RS07275 PF00586 AIR synthase related protein, N-terminal domain CUC60_RS07280 PF01029 NusB family CUC60_RS07285 PF00885 6,7-dimethyl-8-ribityllumazine synthase CUC60_RS07290 PF00925 GTP cyclohydrolase II CUC60_RS07290 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CUC60_RS07320 PF02580 D-Tyr-tRNA(Tyr) deacylase CUC60_RS07325 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CUC60_RS07325 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CUC60_RS07330 PF00581 Rhodanese-like domain CUC60_RS07335 PF02666 Phosphatidylserine decarboxylase CUC60_RS07345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CUC60_RS07345 PF00512 His Kinase A (phospho-acceptor) domain CUC60_RS07345 PF11808 Phosphate regulon sensor protein PhoR CUC60_RS07345 PF00989 PAS fold CUC60_RS07350 PF00072 Response regulator receiver domain CUC60_RS07350 PF00486 Transcriptional regulatory protein, C terminal CUC60_RS07360 PF00106 short chain dehydrogenase CUC60_RS07365 PF01554 MatE CUC60_RS07370 PF00155 Aminotransferase class I and II CUC60_RS07375 PF04286 Protein of unknown function (DUF445) CUC60_RS07390 PF04262 Glutamate-cysteine ligase CUC60_RS07395 PF02600 Disulfide bond formation protein DsbB CUC60_RS07450 PF05728 Uncharacterised protein family (UPF0227) CUC60_RS07455 PF00204 DNA gyrase B CUC60_RS07455 PF00986 DNA gyrase B subunit, carboxyl terminus CUC60_RS07455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CUC60_RS07455 PF01751 Toprim domain CUC60_RS07460 PF00106 short chain dehydrogenase CUC60_RS07465 PF04115 Ureidoglycolate lyase CUC60_RS07470 PF03561 Allantoicase repeat CUC60_RS07475 PF01494 FAD binding domain CUC60_RS07485 PF00860 Permease family CUC60_RS07490 PF00576 HIUase/Transthyretin family CUC60_RS07520 PF02683 Cytochrome C biogenesis protein transmembrane region CUC60_RS07520 PF11412 Disulphide bond corrector protein DsbC CUC60_RS07525 PF07694 5TMR of 5TMR-LYT CUC60_RS07525 PF00990 Diguanylate cyclase, GGDEF domain CUC60_RS07530 PF07859 alpha/beta hydrolase fold CUC60_RS07540 PF03960 ArsC family CUC60_RS07545 PF03372 Endonuclease/Exonuclease/phosphatase family CUC60_RS07550 PF00156 Phosphoribosyl transferase domain CUC60_RS07555 PF07715 TonB-dependent Receptor Plug Domain CUC60_RS07555 PF00593 TonB dependent receptor CUC60_RS07565 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CUC60_RS07565 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CUC60_RS07575 PF08245 Mur ligase middle domain CUC60_RS07575 PF02875 Mur ligase family, glutamate ligase domain CUC60_RS07575 PF01225 Mur ligase family, catalytic domain CUC60_RS07580 PF01820 D-ala D-ala ligase N-terminus CUC60_RS07580 PF07478 D-ala D-ala ligase C-terminus CUC60_RS07585 PF08478 POTRA domain, FtsQ-type CUC60_RS07585 PF03799 Cell division protein FtsQ CUC60_RS07590 PF02491 SHS2 domain inserted in FTSA CUC60_RS07595 PF00091 Tubulin/FtsZ family, GTPase domain CUC60_RS07595 PF12327 FtsZ family, C-terminal domain CUC60_RS07600 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CUC60_RS07610 PF01551 Peptidase family M23 CUC60_RS07615 PF17831 Pyruvate dehydrogenase E1 component middle domain CUC60_RS07615 PF00456 Transketolase, thiamine diphosphate binding domain CUC60_RS07620 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CUC60_RS07620 PF00364 Biotin-requiring enzyme CUC60_RS07620 PF02817 e3 binding domain CUC60_RS07630 PF01169 Uncharacterized protein family UPF0016 CUC60_RS07635 PF07715 TonB-dependent Receptor Plug Domain CUC60_RS07635 PF00593 TonB dependent receptor CUC60_RS07640 PF00258 Flavodoxin CUC60_RS07640 PF01613 Flavin reductase like domain CUC60_RS07645 PF03692 Putative zinc- or iron-chelating domain CUC60_RS07650 PF00478 IMP dehydrogenase / GMP reductase domain CUC60_RS07650 PF00571 CBS domain CUC60_RS07655 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CUC60_RS07655 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CUC60_RS07655 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CUC60_RS07655 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CUC60_RS07660 PF01243 Pyridoxamine 5'-phosphate oxidase CUC60_RS07660 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CUC60_RS07665 PF01368 DHH family CUC60_RS07665 PF02272 DHHA1 domain CUC60_RS07665 PF17768 RecJ OB domain CUC60_RS07685 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CUC60_RS07695 PF04452 RNA methyltransferase CUC60_RS07700 PF00924 Mechanosensitive ion channel CUC60_RS07710 PF13193 AMP-binding enzyme C-terminal domain CUC60_RS07710 PF00501 AMP-binding enzyme CUC60_RS07710 PF16177 Acetyl-coenzyme A synthetase N-terminus CUC60_RS07715 PF00857 Isochorismatase family CUC60_RS07720 PF01037 Lrp/AsnC ligand binding domain CUC60_RS07725 PF00872 Transposase, Mutator family CUC60_RS07730 PF00296 Luciferase-like monooxygenase CUC60_RS07735 PF03358 NADPH-dependent FMN reductase CUC60_RS07740 PF00072 Response regulator receiver domain CUC60_RS07740 PF00196 Bacterial regulatory proteins, luxR family CUC60_RS07750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CUC60_RS07750 PF00512 His Kinase A (phospho-acceptor) domain CUC60_RS07750 PF01627 Hpt domain CUC60_RS07750 PF00072 Response regulator receiver domain CUC60_RS07750 PF00672 HAMP domain CUC60_RS07755 PF04341 Protein of unknown function, DUF485 CUC60_RS07760 PF00474 Sodium:solute symporter family CUC60_RS07770 PF02028 BCCT, betaine/carnitine/choline family transporter CUC60_RS07780 PF00990 Diguanylate cyclase, GGDEF domain CUC60_RS07790 PF17760 UvrA interaction domain CUC60_RS07790 PF00005 ABC transporter CUC60_RS07790 PF17755 UvrA DNA-binding domain CUC60_RS07795 PF16925 Tetracyclin repressor-like, C-terminal domain CUC60_RS07795 PF00440 Bacterial regulatory proteins, tetR family CUC60_RS07800 PF00107 Zinc-binding dehydrogenase CUC60_RS07800 PF08240 Alcohol dehydrogenase GroES-like domain CUC60_RS07810 PF06942 GlpM protein CUC60_RS07815 PF02581 Thiamine monophosphate synthase CUC60_RS07815 PF03070 TENA/THI-4/PQQC family CUC60_RS07815 PF08543 Phosphomethylpyrimidine kinase CUC60_RS07825 PF07690 Major Facilitator Superfamily CUC60_RS07830 PF00436 Single-strand binding protein family CUC60_RS07840 PF03591 AzlC protein CUC60_RS07850 PF00324 Amino acid permease CUC60_RS07860 PF00202 Aminotransferase class-III CUC60_RS07865 PF00171 Aldehyde dehydrogenase family CUC60_RS07870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUC60_RS07875 PF00857 Isochorismatase family CUC60_RS07880 PF02678 Pirin CUC60_RS07880 PF05726 Pirin C-terminal cupin domain CUC60_RS07885 PF01593 Flavin containing amine oxidoreductase CUC60_RS07905 PF07690 Major Facilitator Superfamily CUC60_RS07910 PF03466 LysR substrate binding domain CUC60_RS07910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUC60_RS07930 PF00248 Aldo/keto reductase family CUC60_RS07935 PF12833 Helix-turn-helix domain CUC60_RS07935 PF02311 AraC-like ligand binding domain CUC60_RS07965 PF01638 HxlR-like helix-turn-helix CUC60_RS07975 PF02525 Flavodoxin-like fold CUC60_RS07995 PF02705 K+ potassium transporter CUC60_RS08020 PF00230 Major intrinsic protein CUC60_RS08035 PF00977 Histidine biosynthesis protein CUC60_RS08040 PF01636 Phosphotransferase enzyme family CUC60_RS08055 PF03992 Antibiotic biosynthesis monooxygenase CUC60_RS08070 PF00977 Histidine biosynthesis protein CUC60_RS08085 PF00117 Glutamine amidotransferase class-I CUC60_RS08090 PF00475 Imidazoleglycerol-phosphate dehydratase CUC60_RS08110 PF00583 Acetyltransferase (GNAT) family CUC60_RS08115 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CUC60_RS08115 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CUC60_RS08125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CUC60_RS08125 PF00512 His Kinase A (phospho-acceptor) domain CUC60_RS08125 PF00672 HAMP domain CUC60_RS08130 PF00486 Transcriptional regulatory protein, C terminal CUC60_RS08130 PF00072 Response regulator receiver domain CUC60_RS08135 PF17674 HHH domain CUC60_RS08135 PF16921 Tex protein YqgF-like domain CUC60_RS08135 PF09371 Tex-like protein N-terminal domain CUC60_RS08135 PF00575 S1 RNA binding domain CUC60_RS08140 PF00916 Sulfate permease family CUC60_RS08140 PF01740 STAS domain CUC60_RS08145 PF00106 short chain dehydrogenase CUC60_RS08150 PF01053 Cys/Met metabolism PLP-dependent enzyme CUC60_RS08155 PF12848 ABC transporter CUC60_RS08155 PF00005 ABC transporter CUC60_RS08180 PF04191 Phospholipid methyltransferase CUC60_RS08200 PF00529 HlyD membrane-fusion protein of T1SS CUC60_RS08200 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CUC60_RS08205 PF00873 AcrB/AcrD/AcrF family CUC60_RS08210 PF01545 Cation efflux family CUC60_RS08240 PF00324 Amino acid permease CUC60_RS08255 PF00749 tRNA synthetases class I (E and Q), catalytic domain CUC60_RS08270 PF01795 MraW methylase family CUC60_RS08280 PF03717 Penicillin-binding Protein dimerisation domain CUC60_RS08280 PF00905 Penicillin binding protein transpeptidase domain CUC60_RS08285 PF08245 Mur ligase middle domain CUC60_RS08285 PF01225 Mur ligase family, catalytic domain CUC60_RS08285 PF02875 Mur ligase family, glutamate ligase domain CUC60_RS08290 PF08245 Mur ligase middle domain CUC60_RS08290 PF01225 Mur ligase family, catalytic domain CUC60_RS08290 PF02875 Mur ligase family, glutamate ligase domain CUC60_RS08295 PF00953 Glycosyl transferase family 4 CUC60_RS08305 PF13847 Methyltransferase domain CUC60_RS08310 PF00905 Penicillin binding protein transpeptidase domain CUC60_RS08310 PF00912 Transglycosylase CUC60_RS08310 PF17092 Penicillin-binding protein OB-like domain CUC60_RS08315 PF11104 Type IV pilus assembly protein PilM; CUC60_RS08320 PF05137 Fimbrial assembly protein (PilN) CUC60_RS08325 PF04350 Pilus assembly protein, PilO CUC60_RS08335 PF07660 Secretin and TonB N terminus short domain CUC60_RS08335 PF03958 Bacterial type II/III secretion system short domain CUC60_RS08335 PF11741 AMIN domain CUC60_RS08335 PF00263 Bacterial type II and III secretion system protein CUC60_RS08340 PF01202 Shikimate kinase CUC60_RS08345 PF01761 3-dehydroquinate synthase CUC60_RS08355 PF00310 Glutamine amidotransferases class-II CUC60_RS08355 PF01493 GXGXG motif CUC60_RS08355 PF01645 Conserved region in glutamate synthase CUC60_RS08355 PF04898 Glutamate synthase central domain CUC60_RS08360 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CUC60_RS08360 PF07992 Pyridine nucleotide-disulphide oxidoreductase CUC60_RS08370 PF04011 LemA family CUC60_RS08375 PF04536 TPM domain CUC60_RS08385 PF07963 Prokaryotic N-terminal methylation motif CUC60_RS08385 PF00114 Pilin (bacterial filament) CUC60_RS08395 PF04932 O-Antigen ligase CUC60_RS08395 PF11846 Virulence factor membrane-bound polymerase, C-terminal CUC60_RS08395 PF15864 Protein glycosylation ligase CUC60_RS08405 PF00210 Ferritin-like domain CUC60_RS08410 PF04324 BFD-like [2Fe-2S] binding domain CUC60_RS08415 PF01042 Endoribonuclease L-PSP CUC60_RS08420 PF04607 Region found in RelA / SpoT proteins CUC60_RS08420 PF02824 TGS domain CUC60_RS08420 PF13291 ACT domain CUC60_RS08430 PF01192 RNA polymerase Rpb6 CUC60_RS08435 PF00625 Guanylate kinase CUC60_RS08440 PF02401 LytB protein CUC60_RS08480 PF00886 Ribosomal protein S16 CUC60_RS08485 PF01782 RimM N-terminal domain CUC60_RS08485 PF05239 PRC-barrel domain CUC60_RS08490 PF01746 tRNA (Guanine-1)-methyltransferase CUC60_RS08495 PF01245 Ribosomal protein L19 CUC60_RS08505 PF03280 Proteobacterial lipase chaperone protein CUC60_RS08510 PF01509 TruB family pseudouridylate synthase (N terminal domain) CUC60_RS08510 PF09157 Pseudouridine synthase II TruB, C-terminal CUC60_RS08510 PF16198 tRNA pseudouridylate synthase B C-terminal domain CUC60_RS08515 PF01925 Sulfite exporter TauE/SafE CUC60_RS08525 PF00892 EamA-like transporter family CUC60_RS08530 PF00892 EamA-like transporter family CUC60_RS08535 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CUC60_RS08535 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CUC60_RS08540 PF02913 FAD linked oxidases, C-terminal domain CUC60_RS08540 PF01565 FAD binding domain CUC60_RS08550 PF03992 Antibiotic biosynthesis monooxygenase CUC60_RS08555 PF02525 Flavodoxin-like fold CUC60_RS08565 PF07690 Major Facilitator Superfamily CUC60_RS08570 PF12805 FUSC-like inner membrane protein yccS CUC60_RS08575 PF00080 Copper/zinc superoxide dismutase (SODC) CUC60_RS08580 PF01594 AI-2E family transporter CUC60_RS08585 PF13614 AAA domain CUC60_RS08615 PF00324 Amino acid permease CUC60_RS08620 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CUC60_RS08620 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CUC60_RS08630 PF04958 Arginine N-succinyltransferase beta subunit CUC60_RS08635 PF00171 Aldehyde dehydrogenase family CUC60_RS08640 PF04996 Succinylarginine dihydrolase CUC60_RS08645 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CUC60_RS08660 PF05922 Peptidase inhibitor I9 CUC60_RS08660 PF00082 Subtilase family CUC60_RS08680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUC60_RS08680 PF03466 LysR substrate binding domain CUC60_RS08685 PF00892 EamA-like transporter family CUC60_RS08695 PF05746 DALR anticodon binding domain CUC60_RS08695 PF02092 Glycyl-tRNA synthetase beta subunit CUC60_RS08700 PF02091 Glycyl-tRNA synthetase alpha subunit CUC60_RS08725 PF00571 CBS domain CUC60_RS08730 PF04024 PspC domain CUC60_RS08740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CUC60_RS08740 PF02770 Acyl-CoA dehydrogenase, middle domain CUC60_RS08740 PF12806 Acetyl-CoA dehydrogenase C-terminal like CUC60_RS08740 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CUC60_RS08755 PF08501 Shikimate dehydrogenase substrate binding domain CUC60_RS08755 PF01488 Shikimate / quinate 5-dehydrogenase CUC60_RS08755 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CUC60_RS08760 PF01218 Coproporphyrinogen III oxidase CUC60_RS08765 PF00925 GTP cyclohydrolase II CUC60_RS08770 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CUC60_RS08770 PF02779 Transketolase, pyrimidine binding domain CUC60_RS08770 PF02780 Transketolase, C-terminal domain CUC60_RS08775 PF00459 Inositol monophosphatase family CUC60_RS08780 PF12343 Cold shock protein DEAD box A CUC60_RS08780 PF03880 DbpA RNA binding domain CUC60_RS08780 PF00271 Helicase conserved C-terminal domain CUC60_RS08780 PF00270 DEAD/DEAH box helicase CUC60_RS08790 PF00005 ABC transporter CUC60_RS08795 PF02405 Permease MlaE CUC60_RS08805 PF05494 MlaC protein CUC60_RS08815 PF01544 CorA-like Mg2+ transporter protein CUC60_RS08820 PF03641 Possible lysine decarboxylase CUC60_RS08825 PF00293 NUDIX domain CUC60_RS08830 PF00156 Phosphoribosyl transferase domain CUC60_RS08835 PF00270 DEAD/DEAH box helicase CUC60_RS08835 PF17191 RecG wedge domain CUC60_RS08835 PF00271 Helicase conserved C-terminal domain CUC60_RS08850 PF01553 Acyltransferase CUC60_RS08860 PF00375 Sodium:dicarboxylate symporter family CUC60_RS08875 PF01926 50S ribosome-binding GTPase CUC60_RS08880 PF02082 Transcriptional regulator CUC60_RS08885 PF00175 Oxidoreductase NAD-binding domain CUC60_RS08885 PF00042 Globin CUC60_RS08885 PF00970 Oxidoreductase FAD-binding domain CUC60_RS08890 PF05872 Bacterial protein of unknown function (DUF853) CUC60_RS08895 PF01053 Cys/Met metabolism PLP-dependent enzyme CUC60_RS08900 PF00117 Glutamine amidotransferase class-I CUC60_RS08905 PF00338 Ribosomal protein S10p/S20e CUC60_RS08910 PF00297 Ribosomal protein L3 CUC60_RS08915 PF00573 Ribosomal protein L4/L1 family CUC60_RS08920 PF00276 Ribosomal protein L23 CUC60_RS08925 PF00181 Ribosomal Proteins L2, RNA binding domain CUC60_RS08925 PF03947 Ribosomal Proteins L2, C-terminal domain CUC60_RS08930 PF00203 Ribosomal protein S19 CUC60_RS08935 PF00237 Ribosomal protein L22p/L17e CUC60_RS08940 PF07650 KH domain CUC60_RS08940 PF00189 Ribosomal protein S3, C-terminal domain CUC60_RS08945 PF00252 Ribosomal protein L16p/L10e CUC60_RS08950 PF00831 Ribosomal L29 protein CUC60_RS08955 PF00366 Ribosomal protein S17 CUC60_RS08960 PF00238 Ribosomal protein L14p/L23e CUC60_RS08965 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CUC60_RS08965 PF00467 KOW motif CUC60_RS08970 PF00673 ribosomal L5P family C-terminus CUC60_RS08970 PF00281 Ribosomal protein L5 CUC60_RS08975 PF00253 Ribosomal protein S14p/S29e CUC60_RS08980 PF00410 Ribosomal protein S8 CUC60_RS08985 PF00347 Ribosomal protein L6 CUC60_RS08990 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CUC60_RS08995 PF00333 Ribosomal protein S5, N-terminal domain CUC60_RS08995 PF03719 Ribosomal protein S5, C-terminal domain CUC60_RS09000 PF00327 Ribosomal protein L30p/L7e CUC60_RS09005 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CUC60_RS09010 PF00344 SecY translocase CUC60_RS09015 PF00444 Ribosomal protein L36 CUC60_RS09020 PF00416 Ribosomal protein S13/S18 CUC60_RS09025 PF00411 Ribosomal protein S11 CUC60_RS09030 PF01479 S4 domain CUC60_RS09030 PF00163 Ribosomal protein S4/S9 N-terminal domain CUC60_RS09035 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CUC60_RS09035 PF01000 RNA polymerase Rpb3/RpoA insert domain CUC60_RS09035 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CUC60_RS09040 PF01196 Ribosomal protein L17 CUC60_RS09045 PF00743 Flavin-binding monooxygenase-like CUC60_RS09050 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CUC60_RS09050 PF02770 Acyl-CoA dehydrogenase, middle domain CUC60_RS09050 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CUC60_RS09055 PF03937 Flavinator of succinate dehydrogenase CUC60_RS09085 PF09526 Probable metal-binding protein (DUF2387) CUC60_RS09090 PF01432 Peptidase family M3 CUC60_RS09095 PF00773 RNB domain CUC60_RS09095 PF00575 S1 RNA binding domain CUC60_RS09095 PF08461 Ribonuclease R winged-helix domain CUC60_RS09095 PF08206 Ribonuclease B OB domain CUC60_RS09095 PF17876 Cold shock domain CUC60_RS09140 PF01557 Fumarylacetoacetate (FAA) hydrolase family CUC60_RS09145 PF12833 Helix-turn-helix domain CUC60_RS09150 PF00892 EamA-like transporter family CUC60_RS09155 PF03631 Virulence factor BrkB CUC60_RS09160 PF03358 NADPH-dependent FMN reductase CUC60_RS09185 PF02130 Uncharacterized protein family UPF0054 CUC60_RS09190 PF02562 PhoH-like protein CUC60_RS09195 PF01938 TRAM domain CUC60_RS09195 PF04055 Radical SAM superfamily CUC60_RS09195 PF00919 Uncharacterized protein family UPF0004 CUC60_RS09200 PF01551 Peptidase family M23 CUC60_RS09200 PF10145 Phage-related minor tail protein CUC60_RS09200 PF01464 Transglycosylase SLT domain CUC60_RS09210 PF00056 lactate/malate dehydrogenase, NAD binding domain CUC60_RS09210 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CUC60_RS09230 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CUC60_RS09235 PF01066 CDP-alcohol phosphatidyltransferase CUC60_RS09280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CUC60_RS09280 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CUC60_RS09280 PF02770 Acyl-CoA dehydrogenase, middle domain CUC60_RS09285 PF17932 Tetracyclin repressor-like, C-terminal domain CUC60_RS09285 PF00440 Bacterial regulatory proteins, tetR family CUC60_RS09300 PF01039 Carboxyl transferase domain CUC60_RS09305 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CUC60_RS09305 PF02770 Acyl-CoA dehydrogenase, middle domain CUC60_RS09305 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CUC60_RS09315 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CUC60_RS09315 PF00364 Biotin-requiring enzyme CUC60_RS09315 PF00289 Biotin carboxylase, N-terminal domain CUC60_RS09315 PF02785 Biotin carboxylase C-terminal domain CUC60_RS09325 PF04386 Stringent starvation protein B CUC60_RS09330 PF13417 Glutathione S-transferase, N-terminal domain CUC60_RS09330 PF00043 Glutathione S-transferase, C-terminal domain CUC60_RS09335 PF00380 Ribosomal protein S9/S16 CUC60_RS09340 PF00572 Ribosomal protein L13 CUC60_RS09345 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CUC60_RS09350 PF00398 Ribosomal RNA adenine dimethylase CUC60_RS09355 PF00149 Calcineurin-like phosphoesterase CUC60_RS09375 PF13167 GTP-binding GTPase N-terminal CUC60_RS09375 PF01926 50S ribosome-binding GTPase CUC60_RS09375 PF16360 GTP-binding GTPase Middle Region CUC60_RS09385 PF13091 PLD-like domain CUC60_RS09390 PF10518 TAT (twin-arginine translocation) pathway signal sequence CUC60_RS09390 PF00149 Calcineurin-like phosphoesterase CUC60_RS09395 PF00691 OmpA family CUC60_RS09395 PF01389 OmpA-like transmembrane domain CUC60_RS09400 PF00990 Diguanylate cyclase, GGDEF domain CUC60_RS09400 PF17152 Periplasmic sensor domain CUC60_RS09435 PF07992 Pyridine nucleotide-disulphide oxidoreductase CUC60_RS09435 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CUC60_RS09445 PF04273 Putative phosphatase (DUF442) CUC60_RS09445 PF00753 Metallo-beta-lactamase superfamily CUC60_RS09450 PF00561 alpha/beta hydrolase fold CUC60_RS09455 PF00085 Thioredoxin CUC60_RS09460 PF03061 Thioesterase superfamily CUC60_RS09470 PF04461 Protein of unknown function (DUF520) CUC60_RS09480 PF01266 FAD dependent oxidoreductase CUC60_RS09480 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CUC60_RS09490 PF03795 YCII-related domain CUC60_RS09495 PF04279 Intracellular septation protein A CUC60_RS09500 PF02811 PHP domain CUC60_RS09505 PF01062 Bestrophin, RFP-TM, chloride channel CUC60_RS09510 PF04002 RadC-like JAB domain CUC60_RS09515 PF04127 DNA / pantothenate metabolism flavoprotein CUC60_RS09515 PF02441 Flavoprotein CUC60_RS09520 PF07549 SecD/SecF GG Motif CUC60_RS09520 PF02355 Protein export membrane protein CUC60_RS09525 PF07549 SecD/SecF GG Motif CUC60_RS09525 PF13721 SecD export protein N-terminal TM region CUC60_RS09525 PF02355 Protein export membrane protein CUC60_RS09530 PF02699 Preprotein translocase subunit CUC60_RS09535 PF01702 Queuine tRNA-ribosyltransferase CUC60_RS09550 PF02547 Queuosine biosynthesis protein CUC60_RS09560 PF00512 His Kinase A (phospho-acceptor) domain CUC60_RS09560 PF07689 KaiB domain CUC60_RS09560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CUC60_RS09565 PF03710 Glutamate-ammonia ligase adenylyltransferase CUC60_RS09565 PF08335 GlnD PII-uridylyltransferase CUC60_RS09570 PF01063 Amino-transferase class IV CUC60_RS09585 PF01522 Polysaccharide deacetylase CUC60_RS09590 PF00535 Glycosyl transferase family 2 CUC60_RS09595 PF00534 Glycosyl transferases group 1 CUC60_RS09595 PF13439 Glycosyltransferase Family 4 CUC60_RS09620 PF17102 Stealth protein CR3, conserved region 3 CUC60_RS09620 PF11380 Stealth protein CR2, conserved region 2 CUC60_RS09620 PF17101 Stealth protein CR1, conserved region 1 CUC60_RS09625 PF01336 OB-fold nucleic acid binding domain CUC60_RS09625 PF00152 tRNA synthetases class II (D, K and N) CUC60_RS09625 PF02938 GAD domain CUC60_RS09635 PF07715 TonB-dependent Receptor Plug Domain CUC60_RS09635 PF00593 TonB dependent receptor CUC60_RS09655 PF06146 Phosphate-starvation-inducible E CUC60_RS09660 PF02798 Glutathione S-transferase, N-terminal domain CUC60_RS09660 PF00043 Glutathione S-transferase, C-terminal domain CUC60_RS09665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUC60_RS09665 PF03466 LysR substrate binding domain CUC60_RS09670 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CUC60_RS09670 PF02770 Acyl-CoA dehydrogenase, middle domain CUC60_RS09670 PF12806 Acetyl-CoA dehydrogenase C-terminal like CUC60_RS09670 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CUC60_RS09675 PF02770 Acyl-CoA dehydrogenase, middle domain CUC60_RS09675 PF12806 Acetyl-CoA dehydrogenase C-terminal like CUC60_RS09675 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CUC60_RS09675 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CUC60_RS09685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CUC60_RS09685 PF00512 His Kinase A (phospho-acceptor) domain CUC60_RS09685 PF00672 HAMP domain CUC60_RS09690 PF00486 Transcriptional regulatory protein, C terminal CUC60_RS09690 PF00072 Response regulator receiver domain CUC60_RS09695 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CUC60_RS09715 PF01923 Cobalamin adenosyltransferase CUC60_RS09720 PF07715 TonB-dependent Receptor Plug Domain CUC60_RS09720 PF00593 TonB dependent receptor CUC60_RS09725 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CUC60_RS09730 PF00291 Pyridoxal-phosphate dependent enzyme CUC60_RS09755 PF00290 Tryptophan synthase alpha chain CUC60_RS09760 PF01039 Carboxyl transferase domain CUC60_RS09765 PF02875 Mur ligase family, glutamate ligase domain CUC60_RS09765 PF08245 Mur ligase middle domain CUC60_RS09780 PF00753 Metallo-beta-lactamase superfamily CUC60_RS09785 PF00578 AhpC/TSA family CUC60_RS09785 PF10417 C-terminal domain of 1-Cys peroxiredoxin CUC60_RS09800 PF00083 Sugar (and other) transporter CUC60_RS09800 PF07690 Major Facilitator Superfamily CUC60_RS09805 PF03006 Haemolysin-III related CUC60_RS09830 PF00378 Enoyl-CoA hydratase/isomerase CUC60_RS09830 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CUC60_RS09830 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CUC60_RS09835 PF00108 Thiolase, N-terminal domain CUC60_RS09835 PF02803 Thiolase, C-terminal domain CUC60_RS09840 PF12833 Helix-turn-helix domain CUC60_RS09840 PF02311 AraC-like ligand binding domain CUC60_RS09845 PF02515 CoA-transferase family III CUC60_RS09850 PF04966 Carbohydrate-selective porin, OprB family CUC60_RS09855 PF01011 PQQ enzyme repeat CUC60_RS09860 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CUC60_RS09860 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CUC60_RS09870 PF00893 Small Multidrug Resistance protein CUC60_RS09880 PF00108 Thiolase, N-terminal domain CUC60_RS09880 PF02803 Thiolase, C-terminal domain CUC60_RS09890 PF13505 Outer membrane protein beta-barrel domain CUC60_RS09890 PF00691 OmpA family CUC60_RS09900 PF01139 tRNA-splicing ligase RtcB CUC60_RS09905 PF00324 Amino acid permease CUC60_RS09910 PF05175 Methyltransferase small domain CUC60_RS09910 PF08468 Methyltransferase small domain N-terminal CUC60_RS09915 PF00860 Permease family CUC60_RS09920 PF03144 Elongation factor Tu domain 2 CUC60_RS09920 PF00679 Elongation factor G C-terminus CUC60_RS09920 PF00009 Elongation factor Tu GTP binding domain CUC60_RS09925 PF01741 Large-conductance mechanosensitive channel, MscL CUC60_RS09940 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CUC60_RS09940 PF06827 Zinc finger found in FPG and IleRS CUC60_RS09940 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CUC60_RS09945 PF02245 Methylpurine-DNA glycosylase (MPG) CUC60_RS09950 PF07715 TonB-dependent Receptor Plug Domain CUC60_RS09950 PF00593 TonB dependent receptor CUC60_RS09965 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CUC60_RS09970 PF03547 Membrane transport protein CUC60_RS09980 PF13098 Thioredoxin-like domain CUC60_RS09980 PF10411 Disulfide bond isomerase protein N-terminus CUC60_RS09985 PF01571 Aminomethyltransferase folate-binding domain CUC60_RS09995 PF04343 Protein of unknown function, DUF488 CUC60_RS10000 PF03831 PhnA domain CUC60_RS10000 PF08274 PhnA Zinc-Ribbon CUC60_RS10005 PF07411 Domain of unknown function (DUF1508) CUC60_RS10010 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CUC60_RS10010 PF03129 Anticodon binding domain CUC60_RS10010 PF04073 Aminoacyl-tRNA editing domain CUC60_RS10015 PF00873 AcrB/AcrD/AcrF family CUC60_RS10030 PF00072 Response regulator receiver domain CUC60_RS10035 PF00072 Response regulator receiver domain CUC60_RS10045 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CUC60_RS10045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CUC60_RS10050 PF01584 CheW-like domain CUC60_RS10050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CUC60_RS10050 PF00072 Response regulator receiver domain CUC60_RS10050 PF01627 Hpt domain CUC60_RS10060 PF01546 Peptidase family M20/M25/M40 CUC60_RS10060 PF07687 Peptidase dimerisation domain CUC60_RS10065 PF08085 Entericidin EcnA/B family CUC60_RS10075 PF04304 Protein of unknown function (DUF454) CUC60_RS10080 PF17969 L,D-transpeptidase C-terminal domain CUC60_RS10080 PF03734 L,D-transpeptidase catalytic domain CUC60_RS10120 PF00667 FAD binding domain CUC60_RS10120 PF00175 Oxidoreductase NAD-binding domain CUC60_RS10120 PF00258 Flavodoxin CUC60_RS10130 PF12805 FUSC-like inner membrane protein yccS CUC60_RS10135 PF07690 Major Facilitator Superfamily CUC60_RS10140 PF00881 Nitroreductase family CUC60_RS10155 PF01235 Sodium:alanine symporter family CUC60_RS10165 PF00291 Pyridoxal-phosphate dependent enzyme CUC60_RS10165 PF13291 ACT domain CUC60_RS10170 PF05992 SbmA/BacA-like family CUC60_RS10200 PF02637 GatB domain CUC60_RS10200 PF02934 GatB/GatE catalytic domain CUC60_RS10205 PF01425 Amidase CUC60_RS10210 PF02686 Glu-tRNAGln amidotransferase C subunit CUC60_RS10220 PF04085 rod shape-determining protein MreC CUC60_RS10225 PF04093 rod shape-determining protein MreD CUC60_RS10230 PF02545 Maf-like protein CUC60_RS10235 PF00575 S1 RNA binding domain CUC60_RS10235 PF10150 Ribonuclease E/G family CUC60_RS10245 PF06974 Protein of unknown function (DUF1298) CUC60_RS10245 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain CUC60_RS10250 PF01507 Phosphoadenosine phosphosulfate reductase family CUC60_RS10265 PF02525 Flavodoxin-like fold CUC60_RS10285 PF02673 Bacitracin resistance protein BacA CUC60_RS10290 PF06719 AraC-type transcriptional regulator N-terminus CUC60_RS10290 PF12833 Helix-turn-helix domain CUC60_RS10295 PF00698 Acyl transferase domain CUC60_RS10295 PF08240 Alcohol dehydrogenase GroES-like domain CUC60_RS10295 PF08990 Erythronolide synthase docking CUC60_RS10295 PF09277 Erythronolide synthase, docking CUC60_RS10295 PF16197 Ketoacyl-synthetase C-terminal extension CUC60_RS10295 PF00109 Beta-ketoacyl synthase, N-terminal domain CUC60_RS10295 PF02801 Beta-ketoacyl synthase, C-terminal domain CUC60_RS10295 PF08659 KR domain CUC60_RS10295 PF00550 Phosphopantetheine attachment site CUC60_RS10295 PF14765 Polyketide synthase dehydratase CUC60_RS10300 PF01965 DJ-1/PfpI family CUC60_RS10310 PF00324 Amino acid permease CUC60_RS10315 PF04303 PrpF protein CUC60_RS10320 PF00348 Polyprenyl synthetase CUC60_RS10325 PF04237 YjbR CUC60_RS10330 PF01145 SPFH domain / Band 7 family CUC60_RS10340 PF01734 Patatin-like phospholipase CUC60_RS10365 PF08019 Phosphoethanolamine transferase EptA/EptB CUC60_RS10365 PF00884 Sulfatase CUC60_RS10370 PF00486 Transcriptional regulatory protein, C terminal CUC60_RS10370 PF00072 Response regulator receiver domain CUC60_RS10375 PF00512 His Kinase A (phospho-acceptor) domain CUC60_RS10375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CUC60_RS10375 PF08521 Two-component sensor kinase N-terminal CUC60_RS10385 PF00909 Ammonium Transporter Family CUC60_RS10395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUC60_RS10395 PF03466 LysR substrate binding domain CUC60_RS10415 PF00133 tRNA synthetases class I (I, L, M and V) CUC60_RS10415 PF08264 Anticodon-binding domain of tRNA CUC60_RS10415 PF10458 Valyl tRNA synthetase tRNA binding arm CUC60_RS10435 PF01906 Putative heavy-metal-binding CUC60_RS10440 PF01906 Putative heavy-metal-binding CUC60_RS10445 PF02321 Outer membrane efflux protein CUC60_RS10450 PF00873 AcrB/AcrD/AcrF family CUC60_RS10455 PF00529 HlyD membrane-fusion protein of T1SS CUC60_RS10455 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CUC60_RS10460 PF01569 PAP2 superfamily CUC60_RS10470 PF00348 Polyprenyl synthetase CUC60_RS10480 PF00829 Ribosomal prokaryotic L21 protein CUC60_RS10485 PF01016 Ribosomal L27 protein CUC60_RS10490 PF03548 Outer membrane lipoprotein carrier protein LolA CUC60_RS10500 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CUC60_RS10500 PF02403 Seryl-tRNA synthetase N-terminal domain CUC60_RS10505 PF10414 Sirohaem synthase dimerisation region CUC60_RS10505 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CUC60_RS10505 PF14824 Sirohaem biosynthesis protein central CUC60_RS10510 PF00588 SpoU rRNA Methylase family CUC60_RS10515 PF01638 HxlR-like helix-turn-helix CUC60_RS10520 PF03358 NADPH-dependent FMN reductase CUC60_RS10525 PF13520 Amino acid permease CUC60_RS10530 PF00465 Iron-containing alcohol dehydrogenase CUC60_RS10540 PF03099 Biotin/lipoate A/B protein ligase family CUC60_RS10545 PF04359 Protein of unknown function (DUF493) CUC60_RS10550 PF04539 Sigma-70 region 3 CUC60_RS10550 PF04545 Sigma-70, region 4 CUC60_RS10550 PF00140 Sigma-70 factor, region 1.2 CUC60_RS10550 PF03979 Sigma-70 factor, region 1.1 CUC60_RS10550 PF04546 Sigma-70, non-essential region CUC60_RS10550 PF04542 Sigma-70 region 2 CUC60_RS10570 PF00581 Rhodanese-like domain CUC60_RS10570 PF17773 UPF0176 acylphosphatase like domain CUC60_RS10580 PF00285 Citrate synthase, C-terminal domain CUC60_RS10585 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CUC60_RS10590 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CUC60_RS10595 PF02910 Fumarate reductase flavoprotein C-term CUC60_RS10595 PF00890 FAD binding domain CUC60_RS10600 PF13085 2Fe-2S iron-sulfur cluster binding domain CUC60_RS10615 PF02779 Transketolase, pyrimidine binding domain CUC60_RS10615 PF16870 2-oxoglutarate dehydrogenase C-terminal CUC60_RS10615 PF16078 2-oxoglutarate dehydrogenase N-terminus CUC60_RS10615 PF00676 Dehydrogenase E1 component CUC60_RS10620 PF02817 e3 binding domain CUC60_RS10620 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CUC60_RS10620 PF00364 Biotin-requiring enzyme CUC60_RS10625 PF07992 Pyridine nucleotide-disulphide oxidoreductase CUC60_RS10625 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CUC60_RS10630 PF00549 CoA-ligase CUC60_RS10630 PF08442 ATP-grasp domain CUC60_RS10635 PF02629 CoA binding domain CUC60_RS10635 PF00549 CoA-ligase CUC60_RS10640 PF00579 tRNA synthetases class I (W and Y) CUC60_RS10645 PF05661 Protein of unknown function (DUF808) CUC60_RS10650 PF04228 Putative neutral zinc metallopeptidase CUC60_RS10695 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CUC60_RS10700 PF00582 Universal stress protein family CUC60_RS10705 PF00132 Bacterial transferase hexapeptide (six repeats) CUC60_RS10710 PF03449 Transcription elongation factor, N-terminal CUC60_RS10710 PF01272 Transcription elongation factor, GreA/GreB, C-term CUC60_RS10715 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CUC60_RS10715 PF02142 MGS-like domain CUC60_RS10715 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CUC60_RS10720 PF00117 Glutamine amidotransferase class-I CUC60_RS10720 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CUC60_RS10735 PF01985 CRS1 / YhbY (CRM) domain CUC60_RS10740 PF01728 FtsJ-like methyltransferase CUC60_RS10745 PF00004 ATPase family associated with various cellular activities (AAA) CUC60_RS10745 PF01434 Peptidase family M41 CUC60_RS10745 PF17862 AAA+ lid domain CUC60_RS10745 PF06480 FtsH Extracellular CUC60_RS10750 PF00809 Pterin binding enzyme CUC60_RS10770 PF09423 PhoD-like phosphatase CUC60_RS10770 PF16655 PhoD-like phosphatase, N-terminal domain CUC60_RS10785 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CUC60_RS10785 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CUC60_RS10800 PF00083 Sugar (and other) transporter CUC60_RS10805 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CUC60_RS10805 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CUC60_RS10810 PF01266 FAD dependent oxidoreductase CUC60_RS10810 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CUC60_RS10815 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain CUC60_RS10815 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain CUC60_RS10820 PF00781 Diacylglycerol kinase catalytic domain CUC60_RS10825 PF00149 Calcineurin-like phosphoesterase CUC60_RS10835 PF00166 Chaperonin 10 Kd subunit CUC60_RS10840 PF00118 TCP-1/cpn60 chaperonin family CUC60_RS10845 PF01219 Prokaryotic diacylglycerol kinase CUC60_RS10855 PF03009 Glycerophosphoryl diester phosphodiesterase family CUC60_RS10860 PF00873 AcrB/AcrD/AcrF family CUC60_RS10870 PF01435 Peptidase family M48 CUC60_RS10875 PF01464 Transglycosylase SLT domain CUC60_RS10885 PF01171 PP-loop family CUC60_RS10895 PF00497 Bacterial extracellular solute-binding proteins, family 3 CUC60_RS10895 PF01464 Transglycosylase SLT domain CUC60_RS10900 PF03449 Transcription elongation factor, N-terminal CUC60_RS10900 PF01272 Transcription elongation factor, GreA/GreB, C-term CUC60_RS10915 PF00501 AMP-binding enzyme CUC60_RS10915 PF13193 AMP-binding enzyme C-terminal domain CUC60_RS10915 PF00668 Condensation domain CUC60_RS10915 PF00550 Phosphopantetheine attachment site CUC60_RS10915 PF00975 Thioesterase domain CUC60_RS10930 PF00664 ABC transporter transmembrane region CUC60_RS10930 PF00005 ABC transporter CUC60_RS10930 PF03412 Peptidase C39 family CUC60_RS10965 PF00665 Integrase core domain CUC60_RS10965 PF08281 Sigma-70, region 4 CUC60_RS10970 PF01695 IstB-like ATP binding protein CUC60_RS11000 PF00881 Nitroreductase family CUC60_RS11015 PF02595 Glycerate kinase family CUC60_RS11020 PF00384 Molybdopterin oxidoreductase CUC60_RS11025 PF02634 FdhD/NarQ family CUC60_RS11030 PF06803 Protein of unknown function (DUF1232) CUC60_RS11035 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CUC60_RS11035 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CUC60_RS11035 PF11890 Domain of unknown function (DUF3410) CUC60_RS11040 PF00152 tRNA synthetases class II (D, K and N) CUC60_RS11050 PF18073 Rubredoxin metal binding domain CUC60_RS11055 PF00324 Amino acid permease CUC60_RS11070 PF01678 Diaminopimelate epimerase CUC60_RS11075 PF01810 LysE type translocator CUC60_RS11080 PF02899 Phage integrase, N-terminal SAM-like domain CUC60_RS11080 PF00589 Phage integrase family CUC60_RS11085 PF01012 Electron transfer flavoprotein domain CUC60_RS11090 PF01012 Electron transfer flavoprotein domain CUC60_RS11090 PF00766 Electron transfer flavoprotein FAD-binding domain CUC60_RS11095 PF03989 DNA gyrase C-terminal domain, beta-propeller CUC60_RS11095 PF00521 DNA gyrase/topoisomerase IV, subunit A CUC60_RS11110 PF00535 Glycosyl transferase family 2 CUC60_RS11130 PF13533 Biotin-lipoyl like CUC60_RS11150 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CUC60_RS11160 PF02687 FtsX-like permease family CUC60_RS11160 PF12704 MacB-like periplasmic core domain CUC60_RS11165 PF00005 ABC transporter CUC60_RS11170 PF13567 Domain of unknown function (DUF4131) CUC60_RS11170 PF00753 Metallo-beta-lactamase superfamily CUC60_RS11170 PF03772 Competence protein CUC60_RS11180 PF01343 Peptidase family S49 CUC60_RS11180 PF06965 Na+/H+ antiporter 1 CUC60_RS11185 PF12697 Alpha/beta hydrolase family CUC60_RS11190 PF00551 Formyl transferase CUC60_RS11195 PF00586 AIR synthase related protein, N-terminal domain CUC60_RS11195 PF02769 AIR synthase related protein, C-terminal domain CUC60_RS11200 PF01594 AI-2E family transporter CUC60_RS11205 PF11638 DnaA N-terminal domain CUC60_RS11205 PF00308 Bacterial dnaA protein CUC60_RS11205 PF08299 Bacterial dnaA protein helix-turn-helix CUC60_RS11235 PF00588 SpoU rRNA Methylase family CUC60_RS11235 PF08032 RNA 2'-O ribose methyltransferase substrate binding CUC60_RS11240 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CUC60_RS11250 PF00691 OmpA family CUC60_RS11255 PF07676 WD40-like Beta Propeller Repeat CUC60_RS11255 PF04052 TolB amino-terminal domain CUC60_RS11265 PF02472 Biopolymer transport protein ExbD/TolR CUC60_RS11270 PF01618 MotA/TolQ/ExbB proton channel family CUC60_RS11275 PF03061 Thioesterase superfamily CUC60_RS11280 PF01546 Peptidase family M20/M25/M40 CUC60_RS11280 PF07687 Peptidase dimerisation domain CUC60_RS11285 PF17864 RuvB AAA lid domain CUC60_RS11285 PF05496 Holliday junction DNA helicase RuvB P-loop domain CUC60_RS11285 PF05491 RuvB C-terminal winged helix domain CUC60_RS11290 PF01330 RuvA N terminal domain CUC60_RS11290 PF07499 RuvA, C-terminal domain CUC60_RS11300 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal CUC60_RS11300 PF02769 AIR synthase related protein, C-terminal domain CUC60_RS11300 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CUC60_RS11305 PF07690 Major Facilitator Superfamily CUC60_RS11310 PF01784 NIF3 (NGG1p interacting factor 3) CUC60_RS11315 PF00378 Enoyl-CoA hydratase/isomerase CUC60_RS11320 PF01467 Cytidylyltransferase-like CUC60_RS11320 PF00293 NUDIX domain CUC60_RS11330 PF00578 AhpC/TSA family CUC60_RS11345 PF06508 Queuosine biosynthesis protein QueC CUC60_RS11355 PF00132 Bacterial transferase hexapeptide (six repeats) CUC60_RS11355 PF14602 Hexapeptide repeat of succinyl-transferase CUC60_RS11355 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CUC60_RS11365 PF03466 LysR substrate binding domain CUC60_RS11365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUC60_RS11370 PF00005 ABC transporter CUC60_RS11370 PF12857 TOBE-like domain CUC60_RS11375 PF00528 Binding-protein-dependent transport system inner membrane component CUC60_RS11380 PF00528 Binding-protein-dependent transport system inner membrane component CUC60_RS11395 PF01063 Amino-transferase class IV CUC60_RS11400 PF02618 YceG-like family CUC60_RS11405 PF02223 Thymidylate kinase CUC60_RS11415 PF02910 Fumarate reductase flavoprotein C-term CUC60_RS11415 PF00890 FAD binding domain CUC60_RS11420 PF13180 PDZ domain CUC60_RS11435 PF10502 Signal peptidase, peptidase S26 CUC60_RS11445 PF14622 Ribonuclease-III-like CUC60_RS11445 PF00035 Double-stranded RNA binding motif CUC60_RS11450 PF01926 50S ribosome-binding GTPase CUC60_RS11450 PF07650 KH domain CUC60_RS11460 PF11967 Recombination protein O N terminal CUC60_RS11460 PF02565 Recombination protein O C terminal CUC60_RS11465 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CUC60_RS11470 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) CUC60_RS11475 PF00106 short chain dehydrogenase CUC60_RS11505 PF00155 Aminotransferase class I and II CUC60_RS11515 PF00990 Diguanylate cyclase, GGDEF domain CUC60_RS11515 PF17151 Periplasmic sensor domain CUC60_RS11525 PF00271 Helicase conserved C-terminal domain CUC60_RS11525 PF12344 Ultra-violet resistance protein B CUC60_RS11525 PF04851 Type III restriction enzyme, res subunit CUC60_RS11525 PF17757 UvrB interaction domain CUC60_RS11525 PF02151 UvrB/uvrC motif CUC60_RS11535 PF00892 EamA-like transporter family CUC60_RS11540 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CUC60_RS11540 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CUC60_RS11555 PF01018 GTP1/OBG CUC60_RS11555 PF01926 50S ribosome-binding GTPase CUC60_RS11560 PF00696 Amino acid kinase family CUC60_RS11560 PF01472 PUA domain CUC60_RS11570 PF07759 Protein of unknown function (DUF1615) CUC60_RS11575 PF01207 Dihydrouridine synthase (Dus) CUC60_RS11595 PF02350 UDP-N-acetylglucosamine 2-epimerase CUC60_RS11625 PF03441 FAD binding domain of DNA photolyase CUC60_RS11625 PF00875 DNA photolyase CUC60_RS11630 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CUC60_RS11635 PF07992 Pyridine nucleotide-disulphide oxidoreductase CUC60_RS11650 PF03971 Monomeric isocitrate dehydrogenase CUC60_RS11655 PF00849 RNA pseudouridylate synthase CUC60_RS11660 PF00180 Isocitrate/isopropylmalate dehydrogenase CUC60_RS11685 PF03466 LysR substrate binding domain CUC60_RS11685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUC60_RS11695 PF02567 Phenazine biosynthesis-like protein CUC60_RS11725 PF02581 Thiamine monophosphate synthase CUC60_RS11730 PF00202 Aminotransferase class-III CUC60_RS11740 PF00849 RNA pseudouridylate synthase CUC60_RS11745 PF18337 RapA N-terminal Tudor like domain CUC60_RS11745 PF00271 Helicase conserved C-terminal domain CUC60_RS11745 PF00176 SNF2 family N-terminal domain CUC60_RS11745 PF18339 RapA N-terminal Tudor like domain 1 CUC60_RS11745 PF12137 RNA polymerase recycling family C-terminal CUC60_RS11755 PF00440 Bacterial regulatory proteins, tetR family CUC60_RS11760 PF00111 2Fe-2S iron-sulfur cluster binding domain CUC60_RS11760 PF00175 Oxidoreductase NAD-binding domain CUC60_RS11760 PF00970 Oxidoreductase FAD-binding domain CUC60_RS11765 PF00487 Fatty acid desaturase CUC60_RS11775 PF00440 Bacterial regulatory proteins, tetR family CUC60_RS11775 PF17754 MftR C-terminal domain CUC60_RS11785 PF00202 Aminotransferase class-III CUC60_RS11795 PF00171 Aldehyde dehydrogenase family CUC60_RS11800 PF01037 Lrp/AsnC ligand binding domain CUC60_RS11805 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CUC60_RS11805 PF00205 Thiamine pyrophosphate enzyme, central domain CUC60_RS11805 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CUC60_RS11810 PF00324 Amino acid permease CUC60_RS11815 PF12849 PBP superfamily domain CUC60_RS11820 PF00528 Binding-protein-dependent transport system inner membrane component CUC60_RS11825 PF00528 Binding-protein-dependent transport system inner membrane component CUC60_RS11830 PF00005 ABC transporter CUC60_RS11835 PF08496 Peptidase family S49 N-terminal CUC60_RS11835 PF01343 Peptidase family S49 CUC60_RS11850 PF08328 Adenylosuccinate lyase C-terminal CUC60_RS11850 PF00206 Lyase CUC60_RS11855 PF04356 Protein of unknown function (DUF489) CUC60_RS11865 PF13344 Haloacid dehalogenase-like hydrolase CUC60_RS11865 PF00293 NUDIX domain CUC60_RS11870 PF00132 Bacterial transferase hexapeptide (six repeats) CUC60_RS11875 PF00768 D-alanyl-D-alanine carboxypeptidase CUC60_RS11875 PF07943 Penicillin-binding protein 5, C-terminal domain CUC60_RS11890 PF01975 Survival protein SurE CUC60_RS11895 PF01551 Peptidase family M23 CUC60_RS11895 PF01476 LysM domain CUC60_RS11900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUC60_RS11900 PF03466 LysR substrate binding domain CUC60_RS11905 PF13654 AAA domain CUC60_RS11905 PF05362 Lon protease (S16) C-terminal proteolytic domain CUC60_RS11910 PF07690 Major Facilitator Superfamily CUC60_RS11915 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CUC60_RS11920 PF13593 SBF-like CPA transporter family (DUF4137) CUC60_RS11925 PF01197 Ribosomal protein L31 CUC60_RS11940 PF04055 Radical SAM superfamily CUC60_RS11945 PF09285 Elongation factor P, C-terminal CUC60_RS11945 PF01132 Elongation factor P (EF-P) OB domain CUC60_RS11945 PF08207 Elongation factor P (EF-P) KOW-like domain CUC60_RS11950 PF13722 5TM C-terminal transporter carbon starvation CstA CUC60_RS11950 PF02554 Carbon starvation protein CstA CUC60_RS11955 PF04328 Selenoprotein, putative CUC60_RS11990 PF17853 GGDEF-like domain CUC60_RS11990 PF06018 CodY GAF-like domain CUC60_RS11990 PF13556 PucR C-terminal helix-turn-helix domain CUC60_RS12005 PF00171 Aldehyde dehydrogenase family CUC60_RS12010 PF00324 Amino acid permease CUC60_RS12015 PF03466 LysR substrate binding domain CUC60_RS12015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUC60_RS12020 PF02028 BCCT, betaine/carnitine/choline family transporter CUC60_RS12025 PF02028 BCCT, betaine/carnitine/choline family transporter CUC60_RS12030 PF00355 Rieske [2Fe-2S] domain CUC60_RS12030 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CUC60_RS12035 PF00171 Aldehyde dehydrogenase family CUC60_RS12040 PF07992 Pyridine nucleotide-disulphide oxidoreductase CUC60_RS12040 PF18113 Rubredoxin binding C-terminal domain CUC60_RS12045 PF01266 FAD dependent oxidoreductase CUC60_RS12045 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CUC60_RS12065 PF00892 EamA-like transporter family CUC60_RS12075 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system CUC60_RS12080 PF00083 Sugar (and other) transporter CUC60_RS12085 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CUC60_RS12085 PF13378 Enolase C-terminal domain-like CUC60_RS12090 PF00109 Beta-ketoacyl synthase, N-terminal domain CUC60_RS12090 PF02801 Beta-ketoacyl synthase, C-terminal domain CUC60_RS12090 PF00698 Acyl transferase domain CUC60_RS12090 PF08240 Alcohol dehydrogenase GroES-like domain CUC60_RS12090 PF08990 Erythronolide synthase docking CUC60_RS12090 PF09277 Erythronolide synthase, docking CUC60_RS12090 PF16197 Ketoacyl-synthetase C-terminal extension CUC60_RS12090 PF14765 Polyketide synthase dehydratase CUC60_RS12090 PF00550 Phosphopantetheine attachment site CUC60_RS12090 PF08659 KR domain CUC60_RS12095 PF00440 Bacterial regulatory proteins, tetR family CUC60_RS12115 PF02678 Pirin CUC60_RS12115 PF17954 Quercetinase C-terminal cupin domain CUC60_RS12125 PF13309 HTH domain CUC60_RS12125 PF08348 YheO-like PAS domain CUC60_RS12135 PF13193 AMP-binding enzyme C-terminal domain CUC60_RS12135 PF00501 AMP-binding enzyme CUC60_RS12135 PF00668 Condensation domain CUC60_RS12135 PF00550 Phosphopantetheine attachment site CUC60_RS12140 PF00975 Thioesterase domain CUC60_RS12140 PF00550 Phosphopantetheine attachment site CUC60_RS12140 PF00668 Condensation domain CUC60_RS12140 PF13193 AMP-binding enzyme C-terminal domain CUC60_RS12140 PF00501 AMP-binding enzyme CUC60_RS12145 PF01032 FecCD transport family CUC60_RS12150 PF01032 FecCD transport family CUC60_RS12155 PF00005 ABC transporter CUC60_RS12160 PF01497 Periplasmic binding protein CUC60_RS12170 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) CUC60_RS12175 PF00668 Condensation domain CUC60_RS12175 PF00501 AMP-binding enzyme CUC60_RS12175 PF00550 Phosphopantetheine attachment site CUC60_RS12180 PF13193 AMP-binding enzyme C-terminal domain CUC60_RS12180 PF00501 AMP-binding enzyme CUC60_RS12185 PF00550 Phosphopantetheine attachment site CUC60_RS12185 PF00857 Isochorismatase family CUC60_RS12190 PF00282 Pyridoxal-dependent decarboxylase conserved domain CUC60_RS12200 PF00005 ABC transporter CUC60_RS12205 PF00005 ABC transporter CUC60_RS12210 PF00975 Thioesterase domain CUC60_RS12220 PF00425 chorismate binding enzyme CUC60_RS12230 PF01208 Uroporphyrinogen decarboxylase (URO-D) CUC60_RS12235 PF05675 Protein of unknown function (DUF817) CUC60_RS12250 PF00144 Beta-lactamase CUC60_RS12260 PF01227 GTP cyclohydrolase I CUC60_RS12265 PF00111 2Fe-2S iron-sulfur cluster binding domain CUC60_RS12265 PF01799 [2Fe-2S] binding domain CUC60_RS12290 PF00591 Glycosyl transferase family, a/b domain CUC60_RS12290 PF02885 Glycosyl transferase family, helical bundle domain CUC60_RS12295 PF00593 TonB dependent receptor CUC60_RS12295 PF07715 TonB-dependent Receptor Plug Domain CUC60_RS12305 PF00117 Glutamine amidotransferase class-I CUC60_RS12635 PF13356 Arm DNA-binding domain CUC60_RS12635 PF00589 Phage integrase family CUC60_RS12645 PF00854 POT family CUC60_RS12650 PF00120 Glutamine synthetase, catalytic domain CUC60_RS12650 PF03951 Glutamine synthetase, beta-Grasp domain CUC60_RS12655 PF04345 Chorismate lyase CUC60_RS12695 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CUC60_RS12695 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CUC60_RS12705 PF13180 PDZ domain CUC60_RS12710 PF12627 Probable RNA and SrmB- binding site of polymerase A CUC60_RS12710 PF01743 Poly A polymerase head domain CUC60_RS12715 PF01515 Phosphate acetyl/butaryl transferase CUC60_RS12715 PF03949 Malic enzyme, NAD binding domain CUC60_RS12715 PF00390 Malic enzyme, N-terminal domain CUC60_RS12725 PF04452 RNA methyltransferase CUC60_RS12730 PF02219 Methylenetetrahydrofolate reductase CUC60_RS12735 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CUC60_RS12735 PF05221 S-adenosyl-L-homocysteine hydrolase CUC60_RS12750 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CUC60_RS12750 PF09317 Domain of unknown function (DUF1974) CUC60_RS12750 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CUC60_RS12755 PF04055 Radical SAM superfamily CUC60_RS12760 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CUC60_RS12760 PF07992 Pyridine nucleotide-disulphide oxidoreductase CUC60_RS12770 PF07690 Major Facilitator Superfamily CUC60_RS12780 PF00557 Metallopeptidase family M24 CUC60_RS12785 PF00318 Ribosomal protein S2 CUC60_RS12790 PF00889 Elongation factor TS CUC60_RS12800 PF12833 Helix-turn-helix domain CUC60_RS12820 PF05036 Sporulation related domain CUC60_RS12820 PF03330 Lytic transglycolase CUC60_RS12825 PF13406 Transglycosylase SLT domain CUC60_RS12830 PF01098 Cell cycle protein CUC60_RS12840 PF14489 QueF-like protein CUC60_RS12840 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CUC60_RS12845 PF01061 ABC-2 type transporter CUC60_RS12850 PF00005 ABC transporter CUC60_RS12880 PF00464 Serine hydroxymethyltransferase CUC60_RS12885 PF02321 Outer membrane efflux protein CUC60_RS12890 PF00873 AcrB/AcrD/AcrF family CUC60_RS12895 PF13533 Biotin-lipoyl like CUC60_RS12900 PF03466 LysR substrate binding domain CUC60_RS12900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUC60_RS12905 PF00497 Bacterial extracellular solute-binding proteins, family 3 CUC60_RS12910 PF00528 Binding-protein-dependent transport system inner membrane component CUC60_RS12915 PF00528 Binding-protein-dependent transport system inner membrane component CUC60_RS12925 PF00893 Small Multidrug Resistance protein CUC60_RS12930 PF00037 4Fe-4S binding domain CUC60_RS12935 PF01136 Peptidase family U32 CUC60_RS12935 PF16325 Peptidase family U32 C-terminal domain CUC60_RS12940 PF00155 Aminotransferase class I and II CUC60_RS12940 PF00392 Bacterial regulatory proteins, gntR family CUC60_RS12945 PF02567 Phenazine biosynthesis-like protein CUC60_RS12950 PF00970 Oxidoreductase FAD-binding domain CUC60_RS12950 PF00175 Oxidoreductase NAD-binding domain CUC60_RS12955 PF01980 tRNA-methyltransferase O CUC60_RS12955 PF18389 TrmO C-terminal domain CUC60_RS12965 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CUC60_RS12965 PF00437 Type II/IV secretion system protein CUC60_RS12975 PF00072 Response regulator receiver domain CUC60_RS12975 PF00486 Transcriptional regulatory protein, C terminal CUC60_RS12980 PF00512 His Kinase A (phospho-acceptor) domain CUC60_RS12980 PF08521 Two-component sensor kinase N-terminal CUC60_RS12980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CUC60_RS12990 PF00293 NUDIX domain CUC60_RS13005 PF01513 ATP-NAD kinase CUC60_RS13010 PF07023 Protein of unknown function (DUF1315) CUC60_RS13015 PF00591 Glycosyl transferase family, a/b domain CUC60_RS13015 PF02885 Glycosyl transferase family, helical bundle domain CUC60_RS13025 PF00375 Sodium:dicarboxylate symporter family CUC60_RS13030 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CUC60_RS13030 PF02770 Acyl-CoA dehydrogenase, middle domain CUC60_RS13030 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CUC60_RS13035 PF00756 Putative esterase CUC60_RS13040 PF00800 Prephenate dehydratase CUC60_RS13040 PF01817 Chorismate mutase type II CUC60_RS13040 PF01842 ACT domain CUC60_RS13045 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CUC60_RS13055 PF01546 Peptidase family M20/M25/M40 CUC60_RS13055 PF07687 Peptidase dimerisation domain CUC60_RS13060 PF12706 Beta-lactamase superfamily domain CUC60_RS13070 PF03883 Peroxide stress protein YaaA CUC60_RS13080 PF05690 Thiazole biosynthesis protein ThiG CUC60_RS13090 PF04241 Protein of unknown function (DUF423) CUC60_RS13095 PF04545 Sigma-70, region 4 CUC60_RS13095 PF04542 Sigma-70 region 2 CUC60_RS13095 PF00140 Sigma-70 factor, region 1.2 CUC60_RS13105 PF00313 'Cold-shock' DNA-binding domain CUC60_RS13110 PF00270 DEAD/DEAH box helicase CUC60_RS13110 PF00271 Helicase conserved C-terminal domain CUC60_RS13120 PF00881 Nitroreductase family CUC60_RS13125 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CUC60_RS13125 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CUC60_RS13145 PF01180 Dihydroorotate dehydrogenase CUC60_RS13150 PF02674 Colicin V production protein CUC60_RS13155 PF00156 Phosphoribosyl transferase domain CUC60_RS13170 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CUC60_RS13170 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CUC60_RS13175 PF01435 Peptidase family M48 CUC60_RS13180 PF09424 Yqey-like protein CUC60_RS13185 PF01165 Ribosomal protein S21 CUC60_RS13190 PF00814 Glycoprotease family CUC60_RS13240 PF00202 Aminotransferase class-III CUC60_RS13245 PF00171 Aldehyde dehydrogenase family CUC60_RS13250 PF00324 Amino acid permease CUC60_RS13280 PF04076 Bacterial OB fold (BOF) protein CUC60_RS13305 PF00561 alpha/beta hydrolase fold CUC60_RS13310 PF03616 Sodium/glutamate symporter CUC60_RS13320 PF00392 Bacterial regulatory proteins, gntR family CUC60_RS13320 PF07729 FCD domain CUC60_RS13370 PF08946 Osmosensory transporter coiled coil CUC60_RS13370 PF00083 Sugar (and other) transporter CUC60_RS13395 PF00155 Aminotransferase class I and II CUC60_RS13400 PF02080 TrkA-C domain CUC60_RS13400 PF06826 Predicted Permease Membrane Region CUC60_RS13410 PF04403 Paraquat-inducible protein A CUC60_RS13415 PF02470 MlaD protein CUC60_RS13425 PF01177 Asp/Glu/Hydantoin racemase CUC60_RS13430 PF00892 EamA-like transporter family CUC60_RS13445 PF13610 DDE domain CUC60_RS13465 PF13610 DDE domain CUC60_RS13470 PF13610 DDE domain CUC60_RS13520 PF00324 Amino acid permease CUC60_RS13525 PF01266 FAD dependent oxidoreductase CUC60_RS13530 PF00324 Amino acid permease CUC60_RS13540 PF07729 FCD domain CUC60_RS13540 PF00392 Bacterial regulatory proteins, gntR family CUC60_RS13550 PF00171 Aldehyde dehydrogenase family CUC60_RS13560 PF00202 Aminotransferase class-III CUC60_RS13565 PF04958 Arginine N-succinyltransferase beta subunit CUC60_RS13570 PF00324 Amino acid permease CUC60_RS13580 PF02796 Helix-turn-helix domain of resolvase CUC60_RS13580 PF00239 Resolvase, N terminal domain CUC60_RS13600 PF00106 short chain dehydrogenase CUC60_RS13610 PF00440 Bacterial regulatory proteins, tetR family CUC60_RS13610 PF17932 Tetracyclin repressor-like, C-terminal domain CUC60_RS13615 PF02678 Pirin CUC60_RS13615 PF17954 Quercetinase C-terminal cupin domain CUC60_RS13625 PF00106 short chain dehydrogenase CUC60_RS13630 PF00743 Flavin-binding monooxygenase-like CUC60_RS13640 PF00860 Permease family CUC60_RS13645 PF00962 Adenosine/AMP deaminase CUC60_RS13650 PF01292 Prokaryotic cytochrome b561 CUC60_RS13660 PF01351 Ribonuclease HII CUC60_RS13665 PF02599 Global regulator protein family CUC60_RS13670 PF13840 ACT domain CUC60_RS13670 PF00696 Amino acid kinase family CUC60_RS13670 PF01842 ACT domain CUC60_RS13675 PF01411 tRNA synthetases class II (A) CUC60_RS13675 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CUC60_RS13675 PF02272 DHHA1 domain CUC60_RS13680 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CUC60_RS13680 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CUC60_RS13685 PF13393 Histidyl-tRNA synthetase CUC60_RS13690 PF00709 Adenylosuccinate synthetase CUC60_RS13705 PF00248 Aldo/keto reductase family CUC60_RS13715 PF13545 Crp-like helix-turn-helix domain CUC60_RS13715 PF00027 Cyclic nucleotide-binding domain CUC60_RS13720 PF02566 OsmC-like protein CUC60_RS13735 PF07724 AAA domain (Cdc48 subfamily) CUC60_RS13735 PF17871 AAA lid domain CUC60_RS13735 PF10431 C-terminal, D2-small domain, of ClpB protein CUC60_RS13735 PF00004 ATPase family associated with various cellular activities (AAA) CUC60_RS13735 PF02861 Clp amino terminal domain, pathogenicity island component CUC60_RS13750 PF10672 S-adenosylmethionine-dependent methyltransferase CUC60_RS13750 PF01170 Putative RNA methylase family UPF0020 CUC60_RS13750 PF02926 THUMP domain CUC60_RS13760 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CUC60_RS13760 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CUC60_RS13765 PF01979 Amidohydrolase family CUC60_RS13770 PF13488 Glycine zipper CUC60_RS13770 PF00691 OmpA family CUC60_RS13780 PF13417 Glutathione S-transferase, N-terminal domain CUC60_RS13780 PF00043 Glutathione S-transferase, C-terminal domain CUC60_RS13785 PF02390 Putative methyltransferase CUC60_RS13805 PF07992 Pyridine nucleotide-disulphide oxidoreductase CUC60_RS13805 PF13192 Thioredoxin domain CUC60_RS13830 PF10417 C-terminal domain of 1-Cys peroxiredoxin CUC60_RS13830 PF00578 AhpC/TSA family CUC60_RS13835 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CUC60_RS13835 PF00270 DEAD/DEAH box helicase CUC60_RS13835 PF00271 Helicase conserved C-terminal domain CUC60_RS13835 PF11898 Domain of unknown function (DUF3418) CUC60_RS13835 PF04408 Helicase associated domain (HA2) CUC60_RS13840 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CUC60_RS13840 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CUC60_RS13855 PF03594 Benzoate membrane transport protein CUC60_RS13860 PF00106 short chain dehydrogenase CUC60_RS13865 PF00970 Oxidoreductase FAD-binding domain CUC60_RS13865 PF00111 2Fe-2S iron-sulfur cluster binding domain CUC60_RS13865 PF00175 Oxidoreductase NAD-binding domain CUC60_RS13870 PF00866 Ring hydroxylating beta subunit CUC60_RS13875 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CUC60_RS13875 PF00355 Rieske [2Fe-2S] domain CUC60_RS13880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUC60_RS13880 PF03466 LysR substrate binding domain CUC60_RS13885 PF00403 Heavy-metal-associated domain CUC60_RS13895 PF00376 MerR family regulatory protein CUC60_RS13895 PF09278 MerR, DNA binding CUC60_RS13935 PF02601 Exonuclease VII, large subunit CUC60_RS13935 PF13742 OB-fold nucleic acid binding domain CUC60_RS13970 PF01810 LysE type translocator CUC60_RS13975 PF00313 'Cold-shock' DNA-binding domain CUC60_RS13985 PF03807 NADP oxidoreductase coenzyme F420-dependent CUC60_RS13985 PF14748 Pyrroline-5-carboxylate reductase dimerisation CUC60_RS14015 PF07690 Major Facilitator Superfamily CUC60_RS14020 PF01638 HxlR-like helix-turn-helix CUC60_RS14050 PF01406 tRNA synthetases class I (C) catalytic domain CUC60_RS14050 PF09190 DALR domain CUC60_RS14055 PF01380 SIS domain CUC60_RS14055 PF00571 CBS domain CUC60_RS14070 PF03968 OstA-like protein CUC60_RS14075 PF12399 Branched-chain amino acid ATP-binding cassette transporter CUC60_RS14075 PF00005 ABC transporter CUC60_RS14080 PF02321 Outer membrane efflux protein CUC60_RS14085 PF03412 Peptidase C39 family CUC60_RS14085 PF00005 ABC transporter CUC60_RS14085 PF00664 ABC transporter transmembrane region CUC60_RS14095 PF01205 Uncharacterized protein family UPF0029 CUC60_RS14100 PF00132 Bacterial transferase hexapeptide (six repeats) CUC60_RS14110 PF01596 O-methyltransferase CUC60_RS14120 PF00037 4Fe-4S binding domain CUC60_RS14120 PF11953 Domain of unknown function (DUF3470) CUC60_RS14130 PF01624 MutS domain I CUC60_RS14130 PF05188 MutS domain II CUC60_RS14130 PF05190 MutS family domain IV CUC60_RS14130 PF05192 MutS domain III CUC60_RS14130 PF00488 MutS domain V CUC60_RS14135 PF01037 Lrp/AsnC ligand binding domain CUC60_RS14140 PF00892 EamA-like transporter family CUC60_RS14150 PF03279 Bacterial lipid A biosynthesis acyltransferase CUC60_RS14165 PF07690 Major Facilitator Superfamily CUC60_RS14185 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CUC60_RS14185 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CUC60_RS14205 PF13419 Haloacid dehalogenase-like hydrolase CUC60_RS14220 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) CUC60_RS14220 PF13296 Putative type VI secretion system Rhs element Vgr CUC60_RS14220 PF04717 Type VI secretion system, phage-baseplate injector CUC60_RS14225 PF03527 RHS protein CUC60_RS14225 PF05593 RHS Repeat CUC60_RS14240 PF03466 LysR substrate binding domain CUC60_RS14240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUC60_RS14245 PF01566 Natural resistance-associated macrophage protein CUC60_RS14250 PF03746 LamB/YcsF family CUC60_RS14255 PF07286 Protein of unknown function (DUF1445) CUC60_RS14265 PF02785 Biotin carboxylase C-terminal domain CUC60_RS14265 PF00364 Biotin-requiring enzyme CUC60_RS14265 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CUC60_RS14265 PF00289 Biotin carboxylase, N-terminal domain CUC60_RS14270 PF00654 Voltage gated chloride channel CUC60_RS14290 PF00440 Bacterial regulatory proteins, tetR family CUC60_RS14300 PF13823 Alcohol dehydrogenase GroES-associated CUC60_RS14300 PF08240 Alcohol dehydrogenase GroES-like domain CUC60_RS14300 PF00107 Zinc-binding dehydrogenase CUC60_RS14315 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CUC60_RS14315 PF00289 Biotin carboxylase, N-terminal domain CUC60_RS14315 PF02785 Biotin carboxylase C-terminal domain CUC60_RS14320 PF02525 Flavodoxin-like fold CUC60_RS14340 PF08753 NikR C terminal nickel binding domain CUC60_RS14340 PF01402 Ribbon-helix-helix protein, copG family CUC60_RS14345 PF01425 Amidase CUC60_RS14350 PF00497 Bacterial extracellular solute-binding proteins, family 3 CUC60_RS14355 PF00005 ABC transporter CUC60_RS14385 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath CUC60_RS14400 PF05947 Type VI secretion system, TssF CUC60_RS14425 PF01389 OmpA-like transmembrane domain CUC60_RS14425 PF00691 OmpA family CUC60_RS14435 PF17871 AAA lid domain CUC60_RS14435 PF10431 C-terminal, D2-small domain, of ClpB protein CUC60_RS14435 PF00004 ATPase family associated with various cellular activities (AAA) CUC60_RS14435 PF07724 AAA domain (Cdc48 subfamily) CUC60_RS14445 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE CUC60_RS14465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUC60_RS14465 PF03466 LysR substrate binding domain CUC60_RS14475 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CUC60_RS14480 PF07690 Major Facilitator Superfamily CUC60_RS14495 PF02677 Epoxyqueuosine reductase QueH CUC60_RS14510 PF09278 MerR, DNA binding CUC60_RS14510 PF00376 MerR family regulatory protein CUC60_RS14525 PF00701 Dihydrodipicolinate synthetase family CUC60_RS14535 PF00392 Bacterial regulatory proteins, gntR family CUC60_RS14540 PF05544 Proline racemase CUC60_RS14545 PF01266 FAD dependent oxidoreductase CUC60_RS14555 PF07992 Pyridine nucleotide-disulphide oxidoreductase CUC60_RS14555 PF04324 BFD-like [2Fe-2S] binding domain CUC60_RS14565 PF00083 Sugar (and other) transporter CUC60_RS14570 PF00171 Aldehyde dehydrogenase family CUC60_RS14575 PF13520 Amino acid permease CUC60_RS14580 PF03313 Serine dehydratase alpha chain CUC60_RS14580 PF03315 Serine dehydratase beta chain CUC60_RS14585 PF00171 Aldehyde dehydrogenase family CUC60_RS14585 PF01575 MaoC like domain CUC60_RS14590 PF05138 Phenylacetic acid catabolic protein CUC60_RS14595 PF06243 Phenylacetic acid degradation B CUC60_RS14600 PF05138 Phenylacetic acid catabolic protein CUC60_RS14605 PF01883 Iron-sulfur cluster assembly protein CUC60_RS14610 PF00111 2Fe-2S iron-sulfur cluster binding domain CUC60_RS14610 PF00970 Oxidoreductase FAD-binding domain CUC60_RS14610 PF00175 Oxidoreductase NAD-binding domain CUC60_RS14615 PF00378 Enoyl-CoA hydratase/isomerase CUC60_RS14620 PF00378 Enoyl-CoA hydratase/isomerase CUC60_RS14625 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CUC60_RS14625 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CUC60_RS14625 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain CUC60_RS14630 PF00108 Thiolase, N-terminal domain CUC60_RS14630 PF02803 Thiolase, C-terminal domain CUC60_RS14635 PF00501 AMP-binding enzyme CUC60_RS14635 PF14535 AMP-binding enzyme C-terminal domain CUC60_RS14640 PF08223 PaaX-like protein C-terminal domain CUC60_RS14640 PF07848 PaaX-like protein CUC60_RS14645 PF00132 Bacterial transferase hexapeptide (six repeats) CUC60_RS14650 PF03061 Thioesterase superfamily CUC60_RS14690 PF00199 Catalase CUC60_RS14695 PF01292 Prokaryotic cytochrome b561 CUC60_RS14715 PF12697 Alpha/beta hydrolase family CUC60_RS14720 PF01613 Flavin reductase like domain CUC60_RS14725 PF00296 Luciferase-like monooxygenase CUC60_RS14730 PF00171 Aldehyde dehydrogenase family CUC60_RS14740 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CUC60_RS14750 PF00171 Aldehyde dehydrogenase family CUC60_RS14755 PF02627 Carboxymuconolactone decarboxylase family CUC60_RS14760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUC60_RS14760 PF03466 LysR substrate binding domain CUC60_RS14765 PF02525 Flavodoxin-like fold CUC60_RS14770 PF01614 Bacterial transcriptional regulator CUC60_RS14770 PF09339 IclR helix-turn-helix domain CUC60_RS14775 PF01494 FAD binding domain CUC60_RS14780 PF07702 UTRA domain CUC60_RS14780 PF00392 Bacterial regulatory proteins, gntR family CUC60_RS14790 PF08402 TOBE domain CUC60_RS14790 PF00005 ABC transporter CUC60_RS14795 PF00528 Binding-protein-dependent transport system inner membrane component CUC60_RS14800 PF01266 FAD dependent oxidoreductase CUC60_RS14805 PF00266 Aminotransferase class-V CUC60_RS14810 PF13419 Haloacid dehalogenase-like hydrolase CUC60_RS14815 PF07690 Major Facilitator Superfamily CUC60_RS14820 PF02770 Acyl-CoA dehydrogenase, middle domain CUC60_RS14820 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CUC60_RS14820 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CUC60_RS14825 PF02515 CoA-transferase family III CUC60_RS14830 PF09339 IclR helix-turn-helix domain CUC60_RS14835 PF00378 Enoyl-CoA hydratase/isomerase CUC60_RS14840 PF03060 Nitronate monooxygenase CUC60_RS14845 PF07690 Major Facilitator Superfamily CUC60_RS14850 PF09339 IclR helix-turn-helix domain CUC60_RS14855 PF00108 Thiolase, N-terminal domain CUC60_RS14855 PF02803 Thiolase, C-terminal domain CUC60_RS14860 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain CUC60_RS14860 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CUC60_RS14860 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CUC60_RS14870 PF00378 Enoyl-CoA hydratase/isomerase CUC60_RS14875 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CUC60_RS14875 PF02770 Acyl-CoA dehydrogenase, middle domain CUC60_RS14875 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CUC60_RS14880 PF07690 Major Facilitator Superfamily CUC60_RS14885 PF01144 Coenzyme A transferase CUC60_RS14890 PF01144 Coenzyme A transferase CUC60_RS14900 PF07690 Major Facilitator Superfamily CUC60_RS14910 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CUC60_RS14910 PF02770 Acyl-CoA dehydrogenase, middle domain CUC60_RS14910 PF12806 Acetyl-CoA dehydrogenase C-terminal like CUC60_RS14910 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CUC60_RS14925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUC60_RS14925 PF03466 LysR substrate binding domain CUC60_RS14930 PF00682 HMGL-like CUC60_RS14935 PF00289 Biotin carboxylase, N-terminal domain CUC60_RS14935 PF00364 Biotin-requiring enzyme CUC60_RS14935 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CUC60_RS14935 PF18140 Propionyl-coenzyme A carboxylase BT domain CUC60_RS14935 PF02785 Biotin carboxylase C-terminal domain CUC60_RS14940 PF00378 Enoyl-CoA hydratase/isomerase CUC60_RS14945 PF01039 Carboxyl transferase domain CUC60_RS14950 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CUC60_RS14950 PF02770 Acyl-CoA dehydrogenase, middle domain CUC60_RS14950 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CUC60_RS14955 PF00440 Bacterial regulatory proteins, tetR family CUC60_RS14960 PF13193 AMP-binding enzyme C-terminal domain CUC60_RS14960 PF00501 AMP-binding enzyme CUC60_RS14980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUC60_RS14980 PF03466 LysR substrate binding domain CUC60_RS15010 PF00994 Probable molybdopterin binding domain CUC60_RS15010 PF18146 Damage-inducible protein CinA KH domain CUC60_RS15010 PF02464 Competence-damaged protein CUC60_RS15020 PF06628 Catalase-related immune-responsive CUC60_RS15020 PF00199 Catalase CUC60_RS15020 PF18011 C-terminal domain found in long catalases CUC60_RS15045 PF00717 Peptidase S24-like CUC60_RS15055 PF01037 Lrp/AsnC ligand binding domain CUC60_RS15055 PF13404 AsnC-type helix-turn-helix domain CUC60_RS15065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CUC60_RS15065 PF00072 Response regulator receiver domain CUC60_RS15065 PF00512 His Kinase A (phospho-acceptor) domain CUC60_RS15065 PF09308 LuxQ, periplasmic CUC60_RS15070 PF00072 Response regulator receiver domain CUC60_RS15085 PF00528 Binding-protein-dependent transport system inner membrane component CUC60_RS15090 PF00528 Binding-protein-dependent transport system inner membrane component CUC60_RS15095 PF00005 ABC transporter CUC60_RS15100 PF00497 Bacterial extracellular solute-binding proteins, family 3 CUC60_RS15105 PF00497 Bacterial extracellular solute-binding proteins, family 3 CUC60_RS15115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUC60_RS15115 PF03466 LysR substrate binding domain CUC60_RS15120 PF01810 LysE type translocator CUC60_RS15125 PF00266 Aminotransferase class-V CUC60_RS15135 PF00132 Bacterial transferase hexapeptide (six repeats) CUC60_RS15140 PF00581 Rhodanese-like domain CUC60_RS15150 PF03466 LysR substrate binding domain CUC60_RS15150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUC60_RS15155 PF02798 Glutathione S-transferase, N-terminal domain CUC60_RS15160 PF14834 Glutathione S-transferase, C-terminal domain CUC60_RS15160 PF02798 Glutathione S-transferase, N-terminal domain CUC60_RS15165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUC60_RS15165 PF03466 LysR substrate binding domain CUC60_RS15170 PF03788 LrgA family CUC60_RS15175 PF04172 LrgB-like family CUC60_RS15180 PF00155 Aminotransferase class I and II CUC60_RS15180 PF00392 Bacterial regulatory proteins, gntR family CUC60_RS15195 PF07690 Major Facilitator Superfamily CUC60_RS15200 PF16957 Malonate decarboxylase, alpha subunit, transporter CUC60_RS15205 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase CUC60_RS15210 PF06857 Malonate decarboxylase delta subunit (MdcD) CUC60_RS15215 PF01039 Carboxyl transferase domain CUC60_RS15225 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG CUC60_RS15230 PF00698 Acyl transferase domain CUC60_RS15245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUC60_RS15245 PF03466 LysR substrate binding domain CUC60_RS15250 PF00392 Bacterial regulatory proteins, gntR family CUC60_RS15250 PF00155 Aminotransferase class I and II CUC60_RS15260 PF02322 Cytochrome bd terminal oxidase subunit II CUC60_RS15265 PF01654 Cytochrome bd terminal oxidase subunit I CUC60_RS15280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CUC60_RS15280 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CUC60_RS15280 PF02770 Acyl-CoA dehydrogenase, middle domain CUC60_RS15285 PF00296 Luciferase-like monooxygenase CUC60_RS15290 PF00083 Sugar (and other) transporter CUC60_RS15300 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CUC60_RS15305 PF00005 ABC transporter CUC60_RS15310 PF00528 Binding-protein-dependent transport system inner membrane component CUC60_RS15315 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CUC60_RS15320 PF01177 Asp/Glu/Hydantoin racemase CUC60_RS15325 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CUC60_RS15335 PF03466 LysR substrate binding domain CUC60_RS15335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUC60_RS15345 PF01979 Amidohydrolase family CUC60_RS15345 PF13382 Adenine deaminase C-terminal domain CUC60_RS15355 PF03960 ArsC family CUC60_RS15360 PF01022 Bacterial regulatory protein, arsR family CUC60_RS15365 PF01758 Sodium Bile acid symporter family CUC60_RS15370 PF03466 LysR substrate binding domain CUC60_RS15370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUC60_RS15385 PF13192 Thioredoxin domain CUC60_RS15385 PF07992 Pyridine nucleotide-disulphide oxidoreductase CUC60_RS15400 PF00132 Bacterial transferase hexapeptide (six repeats) CUC60_RS15405 PF00588 SpoU rRNA Methylase family CUC60_RS15410 PF01336 OB-fold nucleic acid binding domain CUC60_RS15410 PF14579 Helix-hairpin-helix motif CUC60_RS15410 PF02811 PHP domain CUC60_RS15410 PF07733 Bacterial DNA polymerase III alpha NTPase domain CUC60_RS15410 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CUC60_RS15415 PF17763 Glutaminase/Asparaginase C-terminal domain CUC60_RS15415 PF00710 Asparaginase, N-terminal CUC60_RS15420 PF00375 Sodium:dicarboxylate symporter family CUC60_RS15425 PF00155 Aminotransferase class I and II CUC60_RS15430 PF01641 SelR domain CUC60_RS15435 PF00255 Glutathione peroxidase CUC60_RS15450 PF00155 Aminotransferase class I and II CUC60_RS15455 PF01966 HD domain CUC60_RS15455 PF08335 GlnD PII-uridylyltransferase CUC60_RS15455 PF01909 Nucleotidyltransferase domain CUC60_RS15460 PF02222 ATP-grasp domain CUC60_RS15470 PF05437 Branched-chain amino acid transport protein (AzlD) CUC60_RS15475 PF03591 AzlC protein CUC60_RS15500 PF01926 50S ribosome-binding GTPase CUC60_RS15500 PF06071 Protein of unknown function (DUF933) CUC60_RS15505 PF00528 Binding-protein-dependent transport system inner membrane component CUC60_RS15510 PF00005 ABC transporter CUC60_RS15510 PF09383 NIL domain CUC60_RS15515 PF03180 NLPA lipoprotein CUC60_RS15520 PF03180 NLPA lipoprotein CUC60_RS15535 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CUC60_RS15535 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CUC60_RS15550 PF00528 Binding-protein-dependent transport system inner membrane component CUC60_RS15555 PF00528 Binding-protein-dependent transport system inner membrane component CUC60_RS15560 PF00005 ABC transporter CUC60_RS15570 PF01037 Lrp/AsnC ligand binding domain CUC60_RS15575 PF01709 Transcriptional regulator CUC60_RS15585 PF00440 Bacterial regulatory proteins, tetR family CUC60_RS15605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUC60_RS15605 PF03466 LysR substrate binding domain CUC60_RS15615 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CUC60_RS15625 PF00892 EamA-like transporter family CUC60_RS15650 PF13954 PapC N-terminal domain CUC60_RS15650 PF00577 Outer membrane usher protein CUC60_RS15650 PF13953 PapC C-terminal domain CUC60_RS15655 PF02753 Pili assembly chaperone PapD, C-terminal domain CUC60_RS15655 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CUC60_RS15660 PF16970 Type-1 fimbrial protein, A CUC60_RS15675 PF06968 Biotin and Thiamin Synthesis associated domain CUC60_RS15675 PF04055 Radical SAM superfamily CUC60_RS15680 PF08331 Domain of unknown function (DUF1730) CUC60_RS15685 PF03853 YjeF-related protein N-terminus CUC60_RS15685 PF01256 Carbohydrate kinase CUC60_RS15690 PF02075 Crossover junction endodeoxyribonuclease RuvC CUC60_RS15705 PF00905 Penicillin binding protein transpeptidase domain CUC60_RS15725 PF02773 S-adenosylmethionine synthetase, C-terminal domain CUC60_RS15725 PF00438 S-adenosylmethionine synthetase, N-terminal domain CUC60_RS15725 PF02772 S-adenosylmethionine synthetase, central domain CUC60_RS15730 PF02779 Transketolase, pyrimidine binding domain CUC60_RS15730 PF00456 Transketolase, thiamine diphosphate binding domain CUC60_RS15730 PF02780 Transketolase, C-terminal domain CUC60_RS15740 PF04264 YceI-like domain CUC60_RS15750 PF09992 Phosphodiester glycosidase CUC60_RS15760 PF05958 tRNA (Uracil-5-)-methyltransferase CUC60_RS15765 PF04229 GrpB protein CUC60_RS15775 PF01037 Lrp/AsnC ligand binding domain CUC60_RS15780 PF00474 Sodium:solute symporter family CUC60_RS15785 PF02146 Sir2 family CUC60_RS15790 PF01597 Glycine cleavage H-protein CUC60_RS15795 PF12833 Helix-turn-helix domain CUC60_RS15795 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CUC60_RS15805 PF00005 ABC transporter CUC60_RS15805 PF00664 ABC transporter transmembrane region CUC60_RS15810 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) CUC60_RS15815 PF06912 Protein of unknown function (DUF1275) CUC60_RS15820 PF00375 Sodium:dicarboxylate symporter family CUC60_RS15835 PF08007 Cupin superfamily protein CUC60_RS15840 PF02545 Maf-like protein CUC60_RS15850 PF00162 Phosphoglycerate kinase CUC60_RS15860 PF01116 Fructose-bisphosphate aldolase class-II CUC60_RS15865 PF00639 PPIC-type PPIASE domain CUC60_RS15865 PF09312 SurA N-terminal domain CUC60_RS15870 PF03968 OstA-like protein CUC60_RS15870 PF04453 LPS transport system D CUC60_RS15875 PF01636 Phosphotransferase enzyme family CUC60_RS15880 PF00483 Nucleotidyl transferase CUC60_RS15885 PF02527 rRNA small subunit methyltransferase G CUC60_RS15890 PF13614 AAA domain CUC60_RS15895 PF02195 ParB-like nuclease domain CUC60_RS15895 PF17762 HTH domain found in ParB protein CUC60_RS15900 PF01618 MotA/TolQ/ExbB proton channel family CUC60_RS15910 PF00005 ABC transporter CUC60_RS15910 PF00664 ABC transporter transmembrane region CUC60_RS15915 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CUC60_RS15920 PF02348 Cytidylyltransferase CUC60_RS15925 PF09115 DNA polymerase III, delta subunit, C terminal CUC60_RS15935 PF01026 TatD related DNase CUC60_RS15950 PF02501 Type II secretion system (T2SS), protein I CUC60_RS15950 PF07963 Prokaryotic N-terminal methylation motif CUC60_RS15955 PF07963 Prokaryotic N-terminal methylation motif CUC60_RS15955 PF11612 Type II secretion system (T2SS), protein J CUC60_RS15960 PF03934 Type II secretion system (T2SS), protein K CUC60_RS15970 PF03167 Uracil DNA glycosylase superfamily CUC60_RS15980 PF14437 MafB19-like deaminase CUC60_RS15990 PF02224 Cytidylate kinase CUC60_RS15995 PF00575 S1 RNA binding domain CUC60_RS16000 PF00216 Bacterial DNA-binding protein CUC60_RS16010 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CUC60_RS16020 PF00743 Flavin-binding monooxygenase-like CUC60_RS16030 PF03969 AFG1-like ATPase CUC60_RS16035 PF00589 Phage integrase family CUC60_RS16035 PF02899 Phage integrase, N-terminal SAM-like domain CUC60_RS16325 PF01551 Peptidase family M23 CUC60_RS16325 PF10145 Phage-related minor tail protein CUC60_RS16325 PF01464 Transglycosylase SLT domain CUC60_RS16405 PF00557 Metallopeptidase family M24 CUC60_RS16405 PF05195 Aminopeptidase P, N-terminal domain CUC60_RS16410 PF01494 FAD binding domain CUC60_RS16415 PF01494 FAD binding domain CUC60_RS16425 PF13411 MerR HTH family regulatory protein CUC60_RS16435 PF01810 LysE type translocator CUC60_RS16440 PF03466 LysR substrate binding domain CUC60_RS16440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUC60_RS16450 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CUC60_RS16455 PF02021 Uncharacterised protein family UPF0102 CUC60_RS16460 PF04972 BON domain CUC60_RS16470 PF09297 NADH pyrophosphatase zinc ribbon domain CUC60_RS16470 PF00293 NUDIX domain CUC60_RS16480 PF00929 Exonuclease CUC60_RS16485 PF01476 LysM domain CUC60_RS16485 PF01464 Transglycosylase SLT domain CUC60_RS16485 PF01464 Transglycosylase SLT domain CUC60_RS16485 PF01476 LysM domain CUC60_RS16490 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CUC60_RS16495 PF00528 Binding-protein-dependent transport system inner membrane component CUC60_RS16500 PF00528 Binding-protein-dependent transport system inner membrane component CUC60_RS16500 PF12911 N-terminal TM domain of oligopeptide transport permease C CUC60_RS16505 PF00005 ABC transporter CUC60_RS16505 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CUC60_RS16510 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CUC60_RS16510 PF07992 Pyridine nucleotide-disulphide oxidoreductase CUC60_RS16535 PF00929 Exonuclease CUC60_RS16540 PF01979 Amidohydrolase family CUC60_RS16555 PF00764 Arginosuccinate synthase CUC60_RS16560 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CUC60_RS16560 PF07992 Pyridine nucleotide-disulphide oxidoreductase CUC60_RS16575 PF05987 Bacterial protein of unknown function (DUF898) CUC60_RS16580 PF03180 NLPA lipoprotein CUC60_RS16595 PF04717 Type VI secretion system, phage-baseplate injector CUC60_RS16595 PF13296 Putative type VI secretion system Rhs element Vgr CUC60_RS16595 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) CUC60_RS16605 PF13610 DDE domain CUC60_RS16615 PF01636 Phosphotransferase enzyme family CUC60_RS16620 PF13610 DDE domain CUC60_RS16635 PF00132 Bacterial transferase hexapeptide (six repeats) CUC60_RS16640 PF13427 Domain of unknown function (DUF4111) CUC60_RS16640 PF01909 Nucleotidyltransferase domain CUC60_RS16645 PF00893 Small Multidrug Resistance protein CUC60_RS16670 PF07091 Ribosomal RNA methyltransferase (FmrO) CUC60_RS16710 PF13610 DDE domain CUC60_RS16730 PF00375 Sodium:dicarboxylate symporter family CUC60_RS16740 PF00753 Metallo-beta-lactamase superfamily CUC60_RS16740 PF16123 Hydroxyacylglutathione hydrolase C-terminus CUC60_RS16745 PF00528 Binding-protein-dependent transport system inner membrane component CUC60_RS16750 PF00005 ABC transporter CUC60_RS16750 PF09383 NIL domain CUC60_RS16755 PF03180 NLPA lipoprotein CUC60_RS16760 PF02844 Phosphoribosylglycinamide synthetase, N domain CUC60_RS16760 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CUC60_RS16760 PF02843 Phosphoribosylglycinamide synthetase, C domain CUC60_RS16765 PF02142 MGS-like domain CUC60_RS16765 PF01808 AICARFT/IMPCHase bienzyme CUC60_RS16770 PF02954 Bacterial regulatory protein, Fis family CUC60_RS16790 PF01134 Glucose inhibited division protein A CUC60_RS16790 PF13932 GidA associated domain CUC60_RS16810 PF08379 Bacterial transglutaminase-like N-terminal region CUC60_RS16810 PF01841 Transglutaminase-like superfamily CUC60_RS16820 PF01168 Alanine racemase, N-terminal domain CUC60_RS16820 PF00842 Alanine racemase, C-terminal domain CUC60_RS16825 PF00772 DnaB-like helicase N terminal domain CUC60_RS16825 PF03796 DnaB-like helicase C terminal domain CUC60_RS16830 PF03948 Ribosomal protein L9, C-terminal domain CUC60_RS16830 PF01281 Ribosomal protein L9, N-terminal domain CUC60_RS16835 PF01084 Ribosomal protein S18 CUC60_RS16840 PF01250 Ribosomal protein S6 CUC60_RS16845 PF01040 UbiA prenyltransferase family CUC60_RS16850 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CUC60_RS16855 PF00510 Cytochrome c oxidase subunit III CUC60_RS16860 PF00115 Cytochrome C and Quinol oxidase polypeptide I CUC60_RS16865 PF06481 COX Aromatic Rich Motif CUC60_RS16865 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CUC60_RS16875 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CUC60_RS16875 PF02896 PEP-utilising enzyme, TIM barrel domain CUC60_RS16875 PF00391 PEP-utilising enzyme, mobile domain CUC60_RS16880 PF03618 Kinase/pyrophosphorylase CUC60_RS16890 PF01522 Polysaccharide deacetylase CUC60_RS16890 PF14883 Hypothetical glycosyl hydrolase family 13 CUC60_RS16895 PF00535 Glycosyl transferase family 2 CUC60_RS16900 PF13994 PgaD-like protein CUC60_RS16910 PF00296 Luciferase-like monooxygenase CUC60_RS16930 PF03466 LysR substrate binding domain CUC60_RS16930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUC60_RS16940 PF00472 RF-1 domain CUC60_RS16940 PF03462 PCRF domain CUC60_RS16945 PF13847 Methyltransferase domain CUC60_RS16945 PF17827 PrmC N-terminal domain CUC60_RS16950 PF00528 Binding-protein-dependent transport system inner membrane component CUC60_RS16955 PF09084 NMT1/THI5 like CUC60_RS16960 PF12833 Helix-turn-helix domain CUC60_RS16965 PF00106 short chain dehydrogenase CUC60_RS16970 PF02770 Acyl-CoA dehydrogenase, middle domain CUC60_RS16970 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CUC60_RS16970 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CUC60_RS16975 PF13193 AMP-binding enzyme C-terminal domain CUC60_RS16975 PF00501 AMP-binding enzyme CUC60_RS16980 PF01613 Flavin reductase like domain CUC60_RS16985 PF00899 ThiF family CUC60_RS16990 PF03109 ABC1 family CUC60_RS17005 PF03814 Potassium-transporting ATPase A subunit CUC60_RS17015 PF02669 K+-transporting ATPase, c chain CUC60_RS17020 PF02702 Osmosensitive K+ channel His kinase sensor domain CUC60_RS17020 PF13493 Domain of unknown function (DUF4118) CUC60_RS17020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CUC60_RS17020 PF00512 His Kinase A (phospho-acceptor) domain CUC60_RS17025 PF00072 Response regulator receiver domain CUC60_RS17025 PF00486 Transcriptional regulatory protein, C terminal CUC60_RS17030 PF00120 Glutamine synthetase, catalytic domain CUC60_RS17040 PF03232 Ubiquinone biosynthesis protein COQ7 CUC60_RS17045 PF07690 Major Facilitator Superfamily CUC60_RS17050 PF01103 Surface antigen CUC60_RS17050 PF07244 Surface antigen variable number repeat CUC60_RS17050 PF17243 POTRA domain TamA domain 1 CUC60_RS17070 PF00330 Aconitase family (aconitate hydratase) CUC60_RS17070 PF06434 Aconitate hydratase 2 N-terminus CUC60_RS17070 PF11791 Aconitate B N-terminal domain CUC60_RS17080 PF00520 Ion transport protein CUC60_RS17080 PF00027 Cyclic nucleotide-binding domain CUC60_RS17085 PF07690 Major Facilitator Superfamily CUC60_RS17100 PF03466 LysR substrate binding domain CUC60_RS17100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUC60_RS17105 PF04284 Protein of unknown function (DUF441) CUC60_RS17115 PF01479 S4 domain CUC60_RS17115 PF00849 RNA pseudouridylate synthase CUC60_RS17130 PF00849 RNA pseudouridylate synthase CUC60_RS17130 PF01479 S4 domain CUC60_RS17135 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CUC60_RS17140 PF08676 MutL C terminal dimerisation domain CUC60_RS17140 PF01119 DNA mismatch repair protein, C-terminal domain CUC60_RS17150 PF17209 Hfq protein CUC60_RS17160 PF00881 Nitroreductase family CUC60_RS17170 PF00149 Calcineurin-like phosphoesterase CUC60_RS17180 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CUC60_RS17180 PF00749 tRNA synthetases class I (E and Q), catalytic domain CUC60_RS17185 PF00958 GMP synthase C terminal domain CUC60_RS17185 PF00117 Glutamine amidotransferase class-I CUC60_RS17185 PF02540 NAD synthase CUC60_RS17190 PF05985 Ethanolamine ammonia-lyase light chain (EutC) CUC60_RS17200 PF13520 Amino acid permease CUC60_RS17205 PF00171 Aldehyde dehydrogenase family CUC60_RS17220 PF00465 Iron-containing alcohol dehydrogenase CUC60_RS17225 PF05970 PIF1-like helicase CUC60_RS17225 PF14493 Helix-turn-helix domain CUC60_RS17235 PF06445 GyrI-like small molecule binding domain CUC60_RS17240 PF02110 Hydroxyethylthiazole kinase family CUC60_RS17255 PF17432 Domain of unknown function (DUF3458_C) ARM repeats CUC60_RS17255 PF01433 Peptidase family M1 domain CUC60_RS17255 PF11940 Domain of unknown function (DUF3458) Ig-like fold CUC60_RS17265 PF00106 short chain dehydrogenase CUC60_RS17275 PF01817 Chorismate mutase type II CUC60_RS17295 PF00440 Bacterial regulatory proteins, tetR family CUC60_RS17300 PF07715 TonB-dependent Receptor Plug Domain CUC60_RS17300 PF00593 TonB dependent receptor CUC60_RS17305 PF00924 Mechanosensitive ion channel CUC60_RS17340 PF07715 TonB-dependent Receptor Plug Domain CUC60_RS17340 PF00593 TonB dependent receptor CUC60_RS17360 PF12848 ABC transporter CUC60_RS17360 PF00005 ABC transporter CUC60_RS17365 PF00582 Universal stress protein family CUC60_RS17380 PF00689 Cation transporting ATPase, C-terminus CUC60_RS17380 PF00690 Cation transporter/ATPase, N-terminus CUC60_RS17385 PF02308 MgtC family CUC60_RS17390 PF03594 Benzoate membrane transport protein CUC60_RS17395 PF01037 Lrp/AsnC ligand binding domain CUC60_RS17400 PF01810 LysE type translocator CUC60_RS17405 PF00923 Transaldolase/Fructose-6-phosphate aldolase CUC60_RS17410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUC60_RS17410 PF03466 LysR substrate binding domain CUC60_RS17420 PF02803 Thiolase, C-terminal domain CUC60_RS17420 PF00108 Thiolase, N-terminal domain CUC60_RS17430 PF01575 MaoC like domain CUC60_RS17435 PF00144 Beta-lactamase CUC60_RS17445 PF07690 Major Facilitator Superfamily CUC60_RS17450 PF12170 DNA polymerase III tau subunit V interacting with alpha CUC60_RS17450 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CUC60_RS17450 PF12169 DNA polymerase III subunits gamma and tau domain III CUC60_RS17455 PF04185 Phosphoesterase family CUC60_RS17455 PF05506 Domain of unknown function (DUF756) CUC60_RS17460 PF03061 Thioesterase superfamily CUC60_RS17465 PF00465 Iron-containing alcohol dehydrogenase CUC60_RS17480 PF01565 FAD binding domain CUC60_RS17480 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CUC60_RS17495 PF01645 Conserved region in glutamate synthase CUC60_RS17575 PF02384 N-6 DNA Methylase CUC60_RS17575 PF12161 HsdM N-terminal domain CUC60_RS17605 PF00772 DnaB-like helicase N terminal domain CUC60_RS17605 PF03796 DnaB-like helicase C terminal domain CUC60_RS17625 PF00149 Calcineurin-like phosphoesterase CUC60_RS17790 PF01551 Peptidase family M23 CUC60_RS17790 PF08525 Opacity-associated protein A N-terminal motif CUC60_RS17790 PF01476 LysM domain CUC60_RS17855 PF08019 Phosphoethanolamine transferase EptA/EptB CUC60_RS17855 PF00884 Sulfatase CUC60_RS17860 PF12832 MFS_1 like family CUC60_RS17870 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CUC60_RS17870 PF00289 Biotin carboxylase, N-terminal domain CUC60_RS17870 PF02785 Biotin carboxylase C-terminal domain CUC60_RS17875 PF00364 Biotin-requiring enzyme CUC60_RS17880 PF01220 Dehydroquinase class II CUC60_RS17885 PF00817 impB/mucB/samB family CUC60_RS17885 PF11799 impB/mucB/samB family C-terminal domain CUC60_RS17885 PF13438 Domain of unknown function (DUF4113) CUC60_RS17895 PF00005 ABC transporter CUC60_RS17900 PF00486 Transcriptional regulatory protein, C terminal CUC60_RS17900 PF00072 Response regulator receiver domain CUC60_RS17910 PF18267 Rubredoxin NAD+ reductase C-terminal domain CUC60_RS17910 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CUC60_RS17910 PF04324 BFD-like [2Fe-2S] binding domain CUC60_RS17910 PF13806 Rieske-like [2Fe-2S] domain CUC60_RS17910 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CUC60_RS17910 PF07992 Pyridine nucleotide-disulphide oxidoreductase CUC60_RS17915 PF04324 BFD-like [2Fe-2S] binding domain CUC60_RS17915 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CUC60_RS17915 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CUC60_RS17915 PF07992 Pyridine nucleotide-disulphide oxidoreductase CUC60_RS17915 PF18267 Rubredoxin NAD+ reductase C-terminal domain CUC60_RS17920 PF01568 Molydopterin dinucleotide binding domain CUC60_RS17920 PF04324 BFD-like [2Fe-2S] binding domain CUC60_RS17920 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CUC60_RS17920 PF00384 Molybdopterin oxidoreductase CUC60_RS17925 PF12804 MobA-like NTP transferase domain CUC60_RS17930 PF00384 Molybdopterin oxidoreductase CUC60_RS17930 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CUC60_RS17930 PF01568 Molydopterin dinucleotide binding domain CUC60_RS17935 PF06463 Molybdenum Cofactor Synthesis C CUC60_RS17935 PF04055 Radical SAM superfamily CUC60_RS17945 PF02391 MoaE protein CUC60_RS17950 PF00994 Probable molybdopterin binding domain CUC60_RS17950 PF01967 MoaC family CUC60_RS17955 PF00994 Probable molybdopterin binding domain CUC60_RS17955 PF03454 MoeA C-terminal region (domain IV) CUC60_RS17955 PF03453 MoeA N-terminal region (domain I and II) CUC60_RS17960 PF01638 HxlR-like helix-turn-helix CUC60_RS17965 PF00155 Aminotransferase class I and II CUC60_RS17965 PF00392 Bacterial regulatory proteins, gntR family CUC60_RS17970 PF00892 EamA-like transporter family CUC60_RS17990 PF02635 DsrE/DsrF-like family CUC60_RS17995 PF16363 GDP-mannose 4,6 dehydratase CUC60_RS18000 PF10415 Fumarase C C-terminus CUC60_RS18000 PF00206 Lyase CUC60_RS18025 PF01266 FAD dependent oxidoreductase CUC60_RS18035 PF02542 YgbB family CUC60_RS18050 PF00440 Bacterial regulatory proteins, tetR family CUC60_RS18055 PF02954 Bacterial regulatory protein, Fis family CUC60_RS18055 PF00072 Response regulator receiver domain CUC60_RS18055 PF00158 Sigma-54 interaction domain CUC60_RS18060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CUC60_RS18060 PF00512 His Kinase A (phospho-acceptor) domain CUC60_RS18060 PF00989 PAS fold CUC60_RS18070 PF00919 Uncharacterized protein family UPF0004 CUC60_RS18070 PF18693 TRAM domain CUC60_RS18070 PF04055 Radical SAM superfamily CUC60_RS18075 PF00696 Amino acid kinase family CUC60_RS18080 PF01765 Ribosome recycling factor CUC60_RS18085 PF01255 Putative undecaprenyl diphosphate synthase CUC60_RS18095 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CUC60_RS18095 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CUC60_RS18095 PF13288 DXP reductoisomerase C-terminal domain CUC60_RS18100 PF02163 Peptidase family M50 CUC60_RS18100 PF17820 PDZ domain CUC60_RS18100 PF13180 PDZ domain CUC60_RS18105 PF07244 Surface antigen variable number repeat CUC60_RS18105 PF01103 Surface antigen CUC60_RS18115 PF00132 Bacterial transferase hexapeptide (six repeats) CUC60_RS18115 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CUC60_RS18120 PF07977 FabA-like domain CUC60_RS18125 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CUC60_RS18125 PF00132 Bacterial transferase hexapeptide (six repeats) CUC60_RS18140 PF02631 RecX family CUC60_RS18145 PF00154 recA bacterial DNA recombination protein CUC60_RS18150 PF01479 S4 domain CUC60_RS18155 PF13419 Haloacid dehalogenase-like hydrolase CUC60_RS18180 PF01037 Lrp/AsnC ligand binding domain CUC60_RS18185 PF00266 Aminotransferase class-V CUC60_RS18190 PF00324 Amino acid permease CUC60_RS18200 PF05922 Peptidase inhibitor I9 CUC60_RS18200 PF00082 Subtilase family CUC60_RS18205 PF00916 Sulfate permease family CUC60_RS18205 PF01740 STAS domain CUC60_RS18210 PF02586 SOS response associated peptidase (SRAP) CUC60_RS18215 PF07995 Glucose / Sorbosone dehydrogenase CUC60_RS18245 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CUC60_RS18245 PF02378 Phosphotransferase system, EIIC CUC60_RS18250 PF00294 pfkB family carbohydrate kinase CUC60_RS18255 PF00391 PEP-utilising enzyme, mobile domain CUC60_RS18255 PF05524 PEP-utilising enzyme, N-terminal CUC60_RS18255 PF02896 PEP-utilising enzyme, TIM barrel domain CUC60_RS18255 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CUC60_RS18255 PF00381 PTS HPr component phosphorylation site CUC60_RS18280 PF05525 Branched-chain amino acid transport protein CUC60_RS18285 PF00557 Metallopeptidase family M24 CUC60_RS18290 PF03466 LysR substrate binding domain CUC60_RS18290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUC60_RS18300 PF00462 Glutaredoxin CUC60_RS18305 PF00202 Aminotransferase class-III CUC60_RS18310 PF00478 IMP dehydrogenase / GMP reductase domain CUC60_RS18310 PF00571 CBS domain CUC60_RS18335 PF00448 SRP54-type protein, GTPase domain CUC60_RS18335 PF02881 SRP54-type protein, helical bundle domain CUC60_RS18345 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) CUC60_RS18360 PF08173 Membrane bound YbgT-like protein CUC60_RS18365 PF02322 Cytochrome bd terminal oxidase subunit II CUC60_RS18370 PF01654 Cytochrome bd terminal oxidase subunit I CUC60_RS18385 PF07290 Protein of unknown function (DUF1449) CUC60_RS18395 PF00294 pfkB family carbohydrate kinase CUC60_RS18400 PF07715 TonB-dependent Receptor Plug Domain CUC60_RS18400 PF00593 TonB dependent receptor CUC60_RS18405 PF05193 Peptidase M16 inactive domain CUC60_RS18405 PF00675 Insulinase (Peptidase family M16) CUC60_RS18405 PF08367 Peptidase M16C associated CUC60_RS18410 PF02253 Phospholipase A1 CUC60_RS18415 PF02386 Cation transport protein CUC60_RS18420 PF02254 TrkA-N domain CUC60_RS18420 PF02080 TrkA-C domain CUC60_RS18425 PF00585 C-terminal regulatory domain of Threonine dehydratase CUC60_RS18425 PF00291 Pyridoxal-phosphate dependent enzyme CUC60_RS18430 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CUC60_RS18445 PF01118 Semialdehyde dehydrogenase, NAD binding domain CUC60_RS18445 PF02774 Semialdehyde dehydrogenase, dimerisation domain CUC60_RS18455 PF02617 ATP-dependent Clp protease adaptor protein ClpS CUC60_RS18460 PF10431 C-terminal, D2-small domain, of ClpB protein CUC60_RS18460 PF02861 Clp amino terminal domain, pathogenicity island component CUC60_RS18460 PF17871 AAA lid domain CUC60_RS18460 PF07724 AAA domain (Cdc48 subfamily) CUC60_RS18460 PF00004 ATPase family associated with various cellular activities (AAA) CUC60_RS18465 PF02694 Uncharacterised BCR, YnfA/UPF0060 family CUC60_RS18470 PF00793 DAHP synthetase I family CUC60_RS18485 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CUC60_RS18485 PF07992 Pyridine nucleotide-disulphide oxidoreductase CUC60_RS18515 PF00117 Glutamine amidotransferase class-I CUC60_RS18515 PF06418 CTP synthase N-terminus CUC60_RS18520 PF00793 DAHP synthetase I family CUC60_RS18525 PF03952 Enolase, N-terminal domain CUC60_RS18525 PF00113 Enolase, C-terminal TIM barrel domain CUC60_RS18530 PF04239 Protein of unknown function (DUF421) CUC60_RS18535 PF04977 Septum formation initiator CUC60_RS18540 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CUC60_RS18545 PF01144 Coenzyme A transferase CUC60_RS18550 PF01144 Coenzyme A transferase CUC60_RS18555 PF02803 Thiolase, C-terminal domain CUC60_RS18555 PF00108 Thiolase, N-terminal domain CUC60_RS18560 PF10397 Adenylosuccinate lyase C-terminus CUC60_RS18560 PF00206 Lyase CUC60_RS18565 PF00561 alpha/beta hydrolase fold CUC60_RS18570 PF07690 Major Facilitator Superfamily CUC60_RS18575 PF02627 Carboxymuconolactone decarboxylase family CUC60_RS18585 PF00775 Dioxygenase CUC60_RS18590 PF01487 Type I 3-dehydroquinase CUC60_RS18600 PF04966 Carbohydrate-selective porin, OprB family CUC60_RS18605 PF01011 PQQ enzyme repeat CUC60_RS18605 PF13360 PQQ-like domain CUC60_RS18615 PF04143 Sulphur transport CUC60_RS18625 PF00753 Metallo-beta-lactamase superfamily CUC60_RS18635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUC60_RS18635 PF03466 LysR substrate binding domain CUC60_RS18640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CUC60_RS18640 PF02770 Acyl-CoA dehydrogenase, middle domain CUC60_RS18640 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CUC60_RS18655 PF00106 short chain dehydrogenase CUC60_RS18665 PF07690 Major Facilitator Superfamily CUC60_RS18675 PF01425 Amidase CUC60_RS18680 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CUC60_RS18710 PF00175 Oxidoreductase NAD-binding domain CUC60_RS18710 PF00111 2Fe-2S iron-sulfur cluster binding domain CUC60_RS18715 PF01613 Flavin reductase like domain CUC60_RS18720 PF12833 Helix-turn-helix domain CUC60_RS18720 PF02311 AraC-like ligand binding domain CUC60_RS18725 PF02727 Copper amine oxidase, N2 domain CUC60_RS18725 PF07833 Copper amine oxidase N-terminal domain CUC60_RS18725 PF02728 Copper amine oxidase, N3 domain CUC60_RS18725 PF01179 Copper amine oxidase, enzyme domain CUC60_RS18735 PF00171 Aldehyde dehydrogenase family CUC60_RS18740 PF01804 Penicillin amidase CUC60_RS18745 PF12146 Serine aminopeptidase, S33 CUC60_RS18750 PF00108 Thiolase, N-terminal domain CUC60_RS18750 PF02803 Thiolase, C-terminal domain CUC60_RS18755 PF01144 Coenzyme A transferase CUC60_RS18760 PF01144 Coenzyme A transferase CUC60_RS18765 PF00775 Dioxygenase CUC60_RS18765 PF04444 Catechol dioxygenase N terminus CUC60_RS18770 PF02426 Muconolactone delta-isomerase CUC60_RS18780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUC60_RS18780 PF03466 LysR substrate binding domain CUC60_RS18790 PF07729 FCD domain CUC60_RS18790 PF00392 Bacterial regulatory proteins, gntR family CUC60_RS18795 PF00920 Dehydratase family CUC60_RS18800 PF07690 Major Facilitator Superfamily CUC60_RS18810 PF00171 Aldehyde dehydrogenase family CUC60_RS18830 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CUC60_RS18830 PF02770 Acyl-CoA dehydrogenase, middle domain CUC60_RS18830 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CUC60_RS18840 PF00158 Sigma-54 interaction domain CUC60_RS18840 PF06506 Propionate catabolism activator CUC60_RS18840 PF02954 Bacterial regulatory protein, Fis family CUC60_RS18845 PF00501 AMP-binding enzyme CUC60_RS18845 PF13193 AMP-binding enzyme C-terminal domain CUC60_RS18850 PF04341 Protein of unknown function, DUF485 CUC60_RS18855 PF00474 Sodium:solute symporter family CUC60_RS18865 PF00171 Aldehyde dehydrogenase family CUC60_RS18875 PF00561 alpha/beta hydrolase fold CUC60_RS18880 PF06628 Catalase-related immune-responsive CUC60_RS18880 PF00199 Catalase CUC60_RS18900 PF07859 alpha/beta hydrolase fold CUC60_RS18905 PF01047 MarR family CUC60_RS18910 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CUC60_RS18910 PF07992 Pyridine nucleotide-disulphide oxidoreductase CUC60_RS18915 PF00106 short chain dehydrogenase CUC60_RS18920 PF01872 RibD C-terminal domain CUC60_RS18925 PF00376 MerR family regulatory protein CUC60_RS18925 PF09278 MerR, DNA binding CUC60_RS18935 PF07992 Pyridine nucleotide-disulphide oxidoreductase CUC60_RS18945 PF12706 Beta-lactamase superfamily domain CUC60_RS18950 PF00440 Bacterial regulatory proteins, tetR family CUC60_RS18950 PF08359 YsiA-like protein, C-terminal region CUC60_RS18960 PF00857 Isochorismatase family CUC60_RS18970 PF07995 Glucose / Sorbosone dehydrogenase CUC60_RS18975 PF00999 Sodium/hydrogen exchanger family CUC60_RS18975 PF02254 TrkA-N domain CUC60_RS18985 PF01546 Peptidase family M20/M25/M40 CUC60_RS18985 PF07687 Peptidase dimerisation domain CUC60_RS19000 PF08479 POTRA domain, ShlB-type CUC60_RS19000 PF17287 POTRA domain CUC60_RS19000 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CUC60_RS19005 PF13018 Extended Signal Peptide of Type V secretion system CUC60_RS19005 PF13332 Hemagglutinin repeat CUC60_RS19005 PF05860 haemagglutination activity domain CUC60_RS19005 PF04829 Pre-toxin domain with VENN motif CUC60_RS19020 PF07690 Major Facilitator Superfamily CUC60_RS19025 PF04909 Amidohydrolase CUC60_RS19035 PF07702 UTRA domain CUC60_RS19035 PF00392 Bacterial regulatory proteins, gntR family CUC60_RS19040 PF08450 SMP-30/Gluconolactonase/LRE-like region CUC60_RS19050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUC60_RS19050 PF03466 LysR substrate binding domain CUC60_RS19070 PF07690 Major Facilitator Superfamily CUC60_RS19075 PF01842 ACT domain CUC60_RS19075 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CUC60_RS19075 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CUC60_RS19080 PF03737 Aldolase/RraA CUC60_RS19100 PF00529 HlyD membrane-fusion protein of T1SS CUC60_RS19100 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CUC60_RS19115 PF00171 Aldehyde dehydrogenase family CUC60_RS19120 PF00920 Dehydratase family CUC60_RS19130 PF03466 LysR substrate binding domain CUC60_RS19130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUC60_RS19135 PF01370 NAD dependent epimerase/dehydratase family CUC60_RS19140 PF07690 Major Facilitator Superfamily CUC60_RS19145 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CUC60_RS19145 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CUC60_RS19150 PF12833 Helix-turn-helix domain CUC60_RS19150 PF06719 AraC-type transcriptional regulator N-terminus CUC60_RS19165 PF00107 Zinc-binding dehydrogenase CUC60_RS19165 PF08240 Alcohol dehydrogenase GroES-like domain CUC60_RS19175 PF01032 FecCD transport family CUC60_RS19180 PF00005 ABC transporter CUC60_RS19200 PF14572 Phosphoribosyl synthetase-associated domain CUC60_RS19200 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CUC60_RS19205 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CUC60_RS19280 PF00196 Bacterial regulatory proteins, luxR family CUC60_RS19285 PF01425 Amidase CUC60_RS19290 PF13533 Biotin-lipoyl like CUC60_RS19295 PF07690 Major Facilitator Superfamily CUC60_RS19320 PF01975 Survival protein SurE CUC60_RS19330 PF02824 TGS domain CUC60_RS19330 PF04607 Region found in RelA / SpoT proteins CUC60_RS19330 PF13291 ACT domain CUC60_RS19385 PF12146 Serine aminopeptidase, S33 CUC60_RS19390 PF02311 AraC-like ligand binding domain CUC60_RS19390 PF12833 Helix-turn-helix domain CUC60_RS19400 PF00672 HAMP domain CUC60_RS19400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CUC60_RS19400 PF16527 Two-component sensor protein CpxA, periplasmic domain CUC60_RS19400 PF00512 His Kinase A (phospho-acceptor) domain CUC60_RS19405 PF00486 Transcriptional regulatory protein, C terminal CUC60_RS19405 PF00072 Response regulator receiver domain CUC60_RS19410 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CUC60_RS19410 PF00529 HlyD membrane-fusion protein of T1SS CUC60_RS19415 PF00873 AcrB/AcrD/AcrF family CUC60_RS19420 PF02321 Outer membrane efflux protein CUC60_RS19425 PF12146 Serine aminopeptidase, S33 CUC60_RS19430 PF00743 Flavin-binding monooxygenase-like CUC60_RS19435 PF01593 Flavin containing amine oxidoreductase CUC60_RS19450 PF01266 FAD dependent oxidoreductase CUC60_RS19470 PF16970 Type-1 fimbrial protein, A CUC60_RS19480 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CUC60_RS19480 PF02753 Pili assembly chaperone PapD, C-terminal domain CUC60_RS19485 PF13953 PapC C-terminal domain CUC60_RS19485 PF13954 PapC N-terminal domain CUC60_RS19485 PF00577 Outer membrane usher protein CUC60_RS19490 PF00419 Fimbrial protein CUC60_RS19500 PF00107 Zinc-binding dehydrogenase CUC60_RS19500 PF08240 Alcohol dehydrogenase GroES-like domain CUC60_RS19510 PF00199 Catalase CUC60_RS19525 PF13091 PLD-like domain CUC60_RS19545 PF01244 Membrane dipeptidase (Peptidase family M19) CUC60_RS19550 PF13186 Iron-sulfur cluster-binding domain CUC60_RS19550 PF04055 Radical SAM superfamily CUC60_RS19555 PF05402 Coenzyme PQQ synthesis protein D (PqqD) CUC60_RS19560 PF03070 TENA/THI-4/PQQC family CUC60_RS19565 PF12706 Beta-lactamase superfamily domain CUC60_RS19570 PF08042 PqqA family CUC60_RS19575 PF02503 Polyphosphate kinase middle domain CUC60_RS19575 PF13090 Polyphosphate kinase C-terminal domain 2 CUC60_RS19575 PF17941 Polyphosphate kinase C-terminal domain 1 CUC60_RS19575 PF13089 Polyphosphate kinase N-terminal domain CUC60_RS19580 PF00149 Calcineurin-like phosphoesterase CUC60_RS19590 PF00550 Phosphopantetheine attachment site CUC60_RS19590 PF00857 Isochorismatase family CUC60_RS19600 PF00005 ABC transporter CUC60_RS19600 PF03459 TOBE domain CUC60_RS19605 PF00528 Binding-protein-dependent transport system inner membrane component CUC60_RS19615 PF03459 TOBE domain CUC60_RS19615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUC60_RS19620 PF00355 Rieske [2Fe-2S] domain CUC60_RS19620 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CUC60_RS19625 PF00866 Ring hydroxylating beta subunit CUC60_RS19630 PF00111 2Fe-2S iron-sulfur cluster binding domain CUC60_RS19630 PF00970 Oxidoreductase FAD-binding domain CUC60_RS19630 PF00175 Oxidoreductase NAD-binding domain CUC60_RS19635 PF14525 AraC-binding-like domain CUC60_RS19635 PF12833 Helix-turn-helix domain CUC60_RS19645 PF01613 Flavin reductase like domain CUC60_RS19660 PF01738 Dienelactone hydrolase family CUC60_RS19665 PF07690 Major Facilitator Superfamily CUC60_RS19670 PF12833 Helix-turn-helix domain CUC60_RS19670 PF06719 AraC-type transcriptional regulator N-terminus CUC60_RS19695 PF03466 LysR substrate binding domain CUC60_RS19695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUC60_RS19700 PF01144 Coenzyme A transferase CUC60_RS19705 PF01144 Coenzyme A transferase CUC60_RS19710 PF02667 Short chain fatty acid transporter CUC60_RS19715 PF00108 Thiolase, N-terminal domain CUC60_RS19715 PF02803 Thiolase, C-terminal domain CUC60_RS19720 PF03466 LysR substrate binding domain CUC60_RS19720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUC60_RS19725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUC60_RS19725 PF03466 LysR substrate binding domain CUC60_RS19740 PF00206 Lyase CUC60_RS19740 PF10415 Fumarase C C-terminus CUC60_RS19745 PF00593 TonB dependent receptor CUC60_RS19745 PF07715 TonB-dependent Receptor Plug Domain CUC60_RS19750 PF00083 Sugar (and other) transporter CUC60_RS19770 PF00528 Binding-protein-dependent transport system inner membrane component CUC60_RS19775 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CUC60_RS19790 PF00392 Bacterial regulatory proteins, gntR family CUC60_RS19790 PF07702 UTRA domain CUC60_RS19800 PF02525 Flavodoxin-like fold CUC60_RS19805 PF01638 HxlR-like helix-turn-helix CUC60_RS19810 PF12833 Helix-turn-helix domain CUC60_RS19810 PF06445 GyrI-like small molecule binding domain CUC60_RS19825 PF01925 Sulfite exporter TauE/SafE CUC60_RS19830 PF04273 Putative phosphatase (DUF442) CUC60_RS19830 PF00753 Metallo-beta-lactamase superfamily CUC60_RS19835 PF00753 Metallo-beta-lactamase superfamily CUC60_RS19835 PF04273 Putative phosphatase (DUF442) CUC60_RS19840 PF00072 Response regulator receiver domain CUC60_RS19840 PF02954 Bacterial regulatory protein, Fis family CUC60_RS19840 PF00158 Sigma-54 interaction domain CUC60_RS19845 PF01062 Bestrophin, RFP-TM, chloride channel CUC60_RS19850 PF00107 Zinc-binding dehydrogenase CUC60_RS19850 PF08240 Alcohol dehydrogenase GroES-like domain CUC60_RS19855 PF00106 short chain dehydrogenase CUC60_RS19860 PF07992 Pyridine nucleotide-disulphide oxidoreductase CUC60_RS19860 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CUC60_RS19865 PF00364 Biotin-requiring enzyme CUC60_RS19865 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CUC60_RS19865 PF02817 e3 binding domain CUC60_RS19870 PF02779 Transketolase, pyrimidine binding domain CUC60_RS19870 PF02780 Transketolase, C-terminal domain CUC60_RS19875 PF00676 Dehydrogenase E1 component CUC60_RS19895 PF08448 PAS fold CUC60_RS19895 PF00990 Diguanylate cyclase, GGDEF domain CUC60_RS19900 PF01264 Chorismate synthase CUC60_RS19905 PF05175 Methyltransferase small domain CUC60_RS19910 PF00291 Pyridoxal-phosphate dependent enzyme CUC60_RS19920 PF00004 ATPase family associated with various cellular activities (AAA) CUC60_RS19920 PF17862 AAA+ lid domain CUC60_RS19920 PF01434 Peptidase family M41 CUC60_RS19930 PF05166 YcgL domain CUC60_RS19950 PF00570 HRDC domain CUC60_RS19950 PF01612 3'-5' exonuclease CUC60_RS19955 PF13662 Toprim domain CUC60_RS19955 PF02132 RecR protein CUC60_RS19960 PF02575 YbaB/EbfC DNA-binding family CUC60_RS19970 PF01053 Cys/Met metabolism PLP-dependent enzyme CUC60_RS19975 PF00561 alpha/beta hydrolase fold CUC60_RS19980 PF08241 Methyltransferase domain CUC60_RS20010 PF01230 HIT domain CUC60_RS20045 PF00005 ABC transporter CUC60_RS20050 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CUC60_RS20060 PF02684 Lipid-A-disaccharide synthetase CUC60_RS20065 PF07715 TonB-dependent Receptor Plug Domain CUC60_RS20065 PF00593 TonB dependent receptor CUC60_RS20085 PF01925 Sulfite exporter TauE/SafE CUC60_RS20090 PF00793 DAHP synthetase I family CUC60_RS20095 PF02654 Cobalamin-5-phosphate synthase CUC60_RS20110 PF02277 Phosphoribosyltransferase CUC60_RS20115 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CUC60_RS20155 PF00593 TonB dependent receptor CUC60_RS20155 PF07715 TonB-dependent Receptor Plug Domain CUC60_RS20170 PF04183 IucA / IucC family CUC60_RS20170 PF06276 Ferric iron reductase FhuF-like transporter CUC60_RS20175 PF06276 Ferric iron reductase FhuF-like transporter CUC60_RS20175 PF04183 IucA / IucC family CUC60_RS20180 PF07690 Major Facilitator Superfamily CUC60_RS20185 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) CUC60_RS20190 PF04183 IucA / IucC family CUC60_RS20190 PF06276 Ferric iron reductase FhuF-like transporter CUC60_RS20195 PF04073 Aminoacyl-tRNA editing domain CUC60_RS20205 PF03109 ABC1 family CUC60_RS20210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CUC60_RS20210 PF02770 Acyl-CoA dehydrogenase, middle domain CUC60_RS20210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CUC60_RS20220 PF00487 Fatty acid desaturase CUC60_RS20225 PF12833 Helix-turn-helix domain CUC60_RS20225 PF12852 Cupin CUC60_RS20230 PF09312 SurA N-terminal domain CUC60_RS20230 PF00639 PPIC-type PPIASE domain CUC60_RS20235 PF00216 Bacterial DNA-binding protein CUC60_RS20250 PF02082 Transcriptional regulator CUC60_RS20255 PF00266 Aminotransferase class-V CUC60_RS20260 PF01592 NifU-like N terminal domain CUC60_RS20265 PF01521 Iron-sulphur cluster biosynthesis CUC60_RS20270 PF07743 HSCB C-terminal oligomerisation domain CUC60_RS20270 PF00226 DnaJ domain CUC60_RS20275 PF00012 Hsp70 protein CUC60_RS20280 PF00111 2Fe-2S iron-sulfur cluster binding domain CUC60_RS20285 PF00211 Adenylate and Guanylate cyclase catalytic domain CUC60_RS20315 PF03737 Aldolase/RraA CUC60_RS20320 PF13460 NAD(P)H-binding CUC60_RS20325 PF01649 Ribosomal protein S20 CUC60_RS20335 PF00459 Inositol monophosphatase family CUC60_RS20350 PF00005 ABC transporter CUC60_RS20350 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CUC60_RS20355 PF00528 Binding-protein-dependent transport system inner membrane component CUC60_RS20360 PF00528 Binding-protein-dependent transport system inner membrane component CUC60_RS20385 PF00593 TonB dependent receptor CUC60_RS20385 PF07715 TonB-dependent Receptor Plug Domain CUC60_RS20395 PF01618 MotA/TolQ/ExbB proton channel family CUC60_RS20400 PF02472 Biopolymer transport protein ExbD/TolR CUC60_RS20405 PF02472 Biopolymer transport protein ExbD/TolR CUC60_RS20415 PF01274 Malate synthase CUC60_RS20485 PF01551 Peptidase family M23 CUC60_RS20485 PF10145 Phage-related minor tail protein CUC60_RS20485 PF01464 Transglycosylase SLT domain CUC60_RS20650 PF01051 Initiator Replication protein CUC60_RS20700 PF05973 Phage derived protein Gp49-like (DUF891) CUC60_RS20790 PF05973 Phage derived protein Gp49-like (DUF891) CUC60_RS20855 PF05973 Phage derived protein Gp49-like (DUF891) CUC60_RS20870 PF03389 MobA/MobL family