locus-tag	class	description
GOD87_RS00040	COG3023	N-Acetylmuramoyl-L-alanine amidase
GOD87_RS00045	COG0728	peptidoglycan biosynthetic process
GOD87_RS00070	COG1596	polysaccharide export
GOD87_RS00075	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
GOD87_RS00080	COG1086	Polysaccharide biosynthesis protein
GOD87_RS00085	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
GOD87_RS00090	COG1083	cytidylyl-transferase
GOD87_RS00105	COG2089	acid synthase
GOD87_RS00135	COG1216	Glycosyl transferase, family 2
GOD87_RS00140	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
GOD87_RS00145	COG1210	Utp--glucose-1-phosphate uridylyltransferase
GOD87_RS00160	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
GOD87_RS00170	COG3293	Transposase
GOD87_RS00190	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
GOD87_RS00200	COG2186	Transcriptional regulator
GOD87_RS00210	COG0277	FAD linked oxidase domain protein
GOD87_RS00215	COG1448	Aminotransferase
GOD87_RS00225	COG1802	Transcriptional regulator
GOD87_RS00240	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
GOD87_RS00260	COG1051	belongs to the nudix hydrolase family
GOD87_RS00295	COG0564	pseudouridine synthase activity
GOD87_RS00335	COG0251	oxidation-reduction process
GOD87_RS00340	COG1113	amino acid transport
GOD87_RS00345	COG1113	amino acid transport
GOD87_RS00365	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
GOD87_RS00370	COG1960	acyl-CoA dehydrogenase activity
GOD87_RS00375	COG1024	Enoyl-CoA hydratase
GOD87_RS00380	COG1024	Enoyl-CoA hydratase
GOD87_RS00385	COG0477	Major facilitator Superfamily
GOD87_RS00390	COG3916	Acyl-homoserine-lactone synthase
GOD87_RS00400	COG2197	response regulator
GOD87_RS00410	COG1960	acyl-CoA dehydrogenase activity
GOD87_RS00415	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
GOD87_RS00415	COG3321	synthase
GOD87_RS00415	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
GOD87_RS00415	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
GOD87_RS00455	COG0271	Belongs to the BolA IbaG family
GOD87_RS00465	COG1192	Involved in chromosome partitioning
GOD87_RS00480	COG0586	Pfam SNARE associated Golgi protein
GOD87_RS00485	COG2259	Doxx family
GOD87_RS00490	COG4399	Belongs to the UPF0754 family
GOD87_RS00495	COG0518	GMP synthase (glutamine-hydrolyzing) activity
GOD87_RS00495	COG0519	Catalyzes the synthesis of GMP from XMP
GOD87_RS00540	COG0281	malic enzyme
GOD87_RS00550	COG2837	iron assimilation
GOD87_RS00555	COG1280	lysine exporter protein (LysE YggA)
GOD87_RS00560	COG1108	ABC-type Mn2 Zn2 transport systems permease components
GOD87_RS00565	COG1121	(ABC) transporter
GOD87_RS00635	COG0386	Belongs to the glutathione peroxidase family
GOD87_RS00650	COG1309	transcriptional regulator
GOD87_RS00655	COG0697	spore germination
GOD87_RS00665	COG0758	DNA mediated transformation
GOD87_RS00700	COG1309	transcriptional regulator
GOD87_RS00735	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
GOD87_RS00745	COG0655	NAD(P)H dehydrogenase (quinone) activity
GOD87_RS00780	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
GOD87_RS00790	COG0477	Major facilitator Superfamily
GOD87_RS00800	COG1253	flavin adenine dinucleotide binding
GOD87_RS00810	COG2860	membrane
GOD87_RS00815	COG0477	Major facilitator Superfamily
GOD87_RS00825	COG0318	PFAM AMP-dependent synthetase and ligase
GOD87_RS00840	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
GOD87_RS00855	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
GOD87_RS00865	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
GOD87_RS00870	COG0606	chelatase, subunit chli
GOD87_RS00880	COG0347	Belongs to the P(II) protein family
GOD87_RS00885	COG0004	ammonium transporteR
GOD87_RS00895	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
GOD87_RS00895	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
GOD87_RS00935	COG0795	lipopolysaccharide-transporting ATPase activity
GOD87_RS00940	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
GOD87_RS00945	COG0793	Belongs to the peptidase S41A family
GOD87_RS00960	COG2197	response regulator
GOD87_RS00970	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
GOD87_RS00980	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
GOD87_RS00985	COG4974	Belongs to the 'phage' integrase family
GOD87_RS01010	COG0772	Belongs to the SEDS family
GOD87_RS01015	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
GOD87_RS01020	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
GOD87_RS01025	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
GOD87_RS01050	COG0697	spore germination
GOD87_RS01055	COG1538	Outer membrane efflux protein
GOD87_RS01075	COG3275	phosphorelay sensor kinase activity
GOD87_RS01085	COG0181	hydroxymethylbilane synthase activity
GOD87_RS01130	COG1716	ATPase activity
GOD87_RS01135	COG0546	phosphoglycolate phosphatase activity
GOD87_RS01235	COG2056	Na+-H+ antiporter family
GOD87_RS01250	COG0326	Molecular chaperone. Has ATPase activity
GOD87_RS01265	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
GOD87_RS01320	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
GOD87_RS01325	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
GOD87_RS01325	COG2169	Transcriptional regulator
GOD87_RS01355	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
GOD87_RS01365	COG0497	DNA recombination
GOD87_RS01380	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
GOD87_RS01390	COG0237	dephospho-CoA kinase activity
GOD87_RS01440	COG0195	Participates in both transcription termination and antitermination
GOD87_RS01455	COG1320	monovalent cation:proton antiporter activity
GOD87_RS01460	COG2212	antiporter activity
GOD87_RS01465	COG1863	multisubunit Na H antiporter MnhE subunit
GOD87_RS01470	COG0651	ATP synthesis coupled electron transport
GOD87_RS01475	COG1006	Multisubunit Na H antiporter MnhC subunit
GOD87_RS01480	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
GOD87_RS01480	COG2111	Na H antiporter
GOD87_RS01495	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
GOD87_RS01515	COG2226	methyltransferase
GOD87_RS01535	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
GOD87_RS01540	COG1074	ATP-dependent DNA helicase activity
GOD87_RS01545	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
GOD87_RS01550	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
GOD87_RS01565	COG0598	Magnesium transport protein CorA
GOD87_RS01570	COG0789	Transcriptional regulator
GOD87_RS01575	COG0484	heat shock protein binding
GOD87_RS01590	COG0475	glutathione-regulated potassium exporter activity
GOD87_RS01590	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
GOD87_RS01595	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
GOD87_RS01615	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
GOD87_RS01625	COG4535	Mg2 and Co2 transporter CorC
GOD87_RS01630	COG0425	Belongs to the sulfur carrier protein TusA family
GOD87_RS01640	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
GOD87_RS01640	COG0644	oxidoreductase
GOD87_RS01650	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
GOD87_RS01665	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
GOD87_RS01670	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
GOD87_RS01680	COG0493	'glutamate synthase
GOD87_RS01680	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
GOD87_RS01710	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
GOD87_RS01725	COG0534	Mate efflux family protein
GOD87_RS01735	COG0635	Involved in the biosynthesis of porphyrin-containing compound
GOD87_RS01740	COG4221	oxidoreductase activity
GOD87_RS01745	COG0583	DNA-binding transcription factor activity
GOD87_RS01760	COG0318	PFAM AMP-dependent synthetase and ligase
GOD87_RS01765	COG1530	ribonuclease E activity
GOD87_RS01775	COG0546	phosphoglycolate phosphatase activity
GOD87_RS01780	COG2378	regulation of single-species biofilm formation
GOD87_RS01785	COG0625	glutathione transferase activity
GOD87_RS01795	COG0583	DNA-binding transcription factor activity
GOD87_RS01860	COG0473	3-isopropylmalate dehydrogenase activity
GOD87_RS01915	COG1301	dicarboxylic acid transport
GOD87_RS01925	COG1560	Kdo2-lipid A biosynthetic process
GOD87_RS01930	COG1280	lysine exporter protein (LysE YggA)
GOD87_RS01935	COG0488	(ABC) transporter
GOD87_RS01940	COG2900	Belongs to the SlyX family
GOD87_RS01950	COG1733	regulation of RNA biosynthetic process
GOD87_RS01975	COG0210	DNA helicase
GOD87_RS01980	COG0724	RNA recognition motif
GOD87_RS02000	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
GOD87_RS02000	COG4651	solute:proton antiporter activity
GOD87_RS02025	COG0788	formyltetrahydrofolate deformylase activity
GOD87_RS02125	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
GOD87_RS02125	COG2813	Specifically methylates the guanine in position
GOD87_RS02135	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
GOD87_RS02145	COG4774	siderophore transport
GOD87_RS02155	COG0740	serine-type endopeptidase activity
GOD87_RS02175	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
GOD87_RS02175	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
GOD87_RS02180	COG0280	phosphate acetyltransferase
GOD87_RS02180	COG0857	belongs to the CobB CobQ family
GOD87_RS02185	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
GOD87_RS02195	COG0800	Aldolase
GOD87_RS02205	COG3265	gluconokinase activity
GOD87_RS02210	COG1012	belongs to the aldehyde dehydrogenase family
GOD87_RS02220	COG2267	carboxylic ester hydrolase activity
GOD87_RS02235	COG0793	Belongs to the peptidase S41A family
GOD87_RS02270	COG1426	Protein conserved in bacteria
GOD87_RS02310	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
GOD87_RS02320	COG1162	GTPase activity
GOD87_RS02325	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
GOD87_RS02340	COG1538	Outer membrane efflux protein
GOD87_RS02345	COG1136	(ABC) transporter
GOD87_RS02345	COG0577	efflux transmembrane transporter activity
GOD87_RS02350	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
GOD87_RS02375	COG0028	Belongs to the TPP enzyme family
GOD87_RS02380	COG0440	acetolactate synthase activity
GOD87_RS02410	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
GOD87_RS02425	COG0084	hydrolase, TatD family'
GOD87_RS02435	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
GOD87_RS02445	COG0583	DNA-binding transcription factor activity
GOD87_RS02455	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
GOD87_RS02540	COG2205	protein histidine kinase activity
GOD87_RS02555	COG2132	Multicopper oxidase
GOD87_RS02580	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
GOD87_RS02615	COG0640	Transcriptional regulator
GOD87_RS02625	COG0798	PFAM Bile acid sodium symporter
GOD87_RS02630	COG0431	NADPH-dependent FMN reductase
GOD87_RS02635	COG0492	ferredoxin-NADP+ reductase activity
GOD87_RS02640	COG2072	flavoprotein involved in K transport
GOD87_RS02665	COG2814	Major facilitator Superfamily
GOD87_RS02675	COG0697	spore germination
GOD87_RS02705	COG3622	Belongs to the hyi family
GOD87_RS02710	COG2084	Dehydrogenase
GOD87_RS02715	COG1024	Enoyl-CoA hydratase
GOD87_RS02720	COG2205	protein histidine kinase activity
GOD87_RS02720	COG0784	Response regulator, receiver
GOD87_RS02720	COG5002	protein histidine kinase activity
GOD87_RS02740	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
GOD87_RS02750	COG3956	TIGRFAM MazG family protein
GOD87_RS02755	COG1555	photosystem II stabilization
GOD87_RS02760	COG0617	tRNA 3'-terminal CCA addition
GOD87_RS02765	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
GOD87_RS02785	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
GOD87_RS02790	COG3028	Belongs to the UPF0307 family
GOD87_RS02795	COG0318	PFAM AMP-dependent synthetase and ligase
GOD87_RS02810	COG0625	glutathione transferase activity
GOD87_RS02815	COG1238	metal cluster binding
GOD87_RS02855	COG0072	phenylalanine-tRNA ligase activity
GOD87_RS02885	COG0248	Ppx GppA phosphatase
GOD87_RS02895	COG0037	tRNA processing
GOD87_RS02935	COG1764	response to oxidative stress
GOD87_RS02940	COG1846	Transcriptional regulator
GOD87_RS02950	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
GOD87_RS03010	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
GOD87_RS03015	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
GOD87_RS03020	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
GOD87_RS03080	COG1214	PFAM Peptidase M22, glycoprotease
GOD87_RS03095	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
GOD87_RS03105	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
GOD87_RS03110	COG0561	phosphatase activity
GOD87_RS03120	COG2132	Multicopper oxidase
GOD87_RS03140	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
GOD87_RS03145	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
GOD87_RS03150	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
GOD87_RS03180	COG1063	alcohol dehydrogenase
GOD87_RS03185	COG0583	DNA-binding transcription factor activity
GOD87_RS03190	COG1960	acyl-CoA dehydrogenase activity
GOD87_RS03195	COG2814	Major facilitator Superfamily
GOD87_RS03200	COG1804	L-carnitine dehydratase bile acid-inducible protein F
GOD87_RS03210	COG1053	succinate dehydrogenase
GOD87_RS03215	COG0583	DNA-binding transcription factor activity
GOD87_RS03230	COG0583	DNA-binding transcription factor activity
GOD87_RS03275	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
GOD87_RS03330	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GOD87_RS03350	COG0745	RESPONSE REGULATOR receiver
GOD87_RS03390	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
GOD87_RS03420	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
GOD87_RS03425	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
GOD87_RS03445	COG0583	DNA-binding transcription factor activity
GOD87_RS03465	COG0668	transmembrane transport
GOD87_RS03475	COG2081	HI0933 family
GOD87_RS03480	COG2515	1-aminocyclopropane-1-carboxylate deaminase
GOD87_RS03510	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
GOD87_RS03510	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
GOD87_RS03520	COG0489	protein tyrosine kinase activity
GOD87_RS03570	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
GOD87_RS03580	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
GOD87_RS03595	COG0730	response to heat
GOD87_RS03605	COG1196	nuclear chromosome segregation
GOD87_RS03625	COG2223	nitrite transmembrane transporter activity
GOD87_RS03630	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
GOD87_RS03635	COG1877	trehalose-phosphatase activity
GOD87_RS03640	COG2226	methyltransferase
GOD87_RS03640	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
GOD87_RS03640	COG0596	Alpha beta hydrolase
GOD87_RS03655	COG4106	trans-aconitate 2-methyltransferase activity
GOD87_RS03670	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
GOD87_RS03675	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
GOD87_RS03680	COG0009	L-threonylcarbamoyladenylate synthase
GOD87_RS03685	COG3101	peptidyl-lysine hydroxylation
GOD87_RS03690	COG1399	metal-binding, possibly nucleic acid-binding protein
GOD87_RS03715	COG1652	LysM domain
GOD87_RS03720	COG0351	phosphomethylpyrimidine kinase
GOD87_RS03720	COG0352	thiamine-phosphate diphosphorylase activity
GOD87_RS03720	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
GOD87_RS03730	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
GOD87_RS03760	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
GOD87_RS03790	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
GOD87_RS03805	COG0358	DNA primase activity
GOD87_RS03815	COG0564	pseudouridine synthase activity
GOD87_RS03840	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
GOD87_RS03865	COG0473	3-isopropylmalate dehydrogenase activity
GOD87_RS03875	COG0657	acetylesterase activity
GOD87_RS03885	COG1012	belongs to the aldehyde dehydrogenase family
GOD87_RS03905	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
GOD87_RS03905	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
GOD87_RS03920	COG1981	membrane
GOD87_RS03965	COG0456	acetyltransferase
GOD87_RS03975	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
GOD87_RS03980	COG0492	ferredoxin-NADP+ reductase activity
GOD87_RS03985	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
GOD87_RS03985	COG1674	ftsk spoiiie
GOD87_RS03990	COG1280	lysine exporter protein (LysE YggA)
GOD87_RS04010	COG2894	cell division
GOD87_RS04025	COG0204	Acyl-transferase
GOD87_RS04030	COG2885	chlorophyll binding
GOD87_RS04035	COG0210	DNA helicase
GOD87_RS04045	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
GOD87_RS04060	COG0121	glutamine amidotransferase
GOD87_RS04080	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
GOD87_RS04085	COG0735	belongs to the Fur family
GOD87_RS04110	COG0420	3'-5' exonuclease activity
GOD87_RS04130	COG1090	epimerase
GOD87_RS04145	COG2050	protein possibly involved in aromatic compounds catabolism
GOD87_RS04155	COG2814	Major facilitator Superfamily
GOD87_RS04160	COG0405	Gamma-glutamyltransferase
GOD87_RS04215	COG0531	amino acid
GOD87_RS04220	COG2040	homocysteine
GOD87_RS04245	COG1309	transcriptional regulator
GOD87_RS04250	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
GOD87_RS04255	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
GOD87_RS04265	COG1607	acyl-coa hydrolase
GOD87_RS04275	COG0523	cobalamin synthesis protein
GOD87_RS04285	COG4681	YaeQ
GOD87_RS04295	COG0726	polysaccharide deacetylase
GOD87_RS04295	COG1649	PFAM Uncharacterised BCR, COG1649
GOD87_RS04300	COG1215	transferase activity, transferring glycosyl groups
GOD87_RS04310	COG1024	Enoyl-CoA hydratase
GOD87_RS04325	COG1414	Transcriptional regulator
GOD87_RS04345	COG1028	Short-chain dehydrogenase reductase Sdr
GOD87_RS04360	COG2271	Major facilitator Superfamily
GOD87_RS04370	COG2267	carboxylic ester hydrolase activity
GOD87_RS04375	COG1028	Short-chain dehydrogenase reductase Sdr
GOD87_RS04390	COG0028	Belongs to the TPP enzyme family
GOD87_RS04400	COG0477	Major facilitator Superfamily
GOD87_RS04405	COG0242	peptide deformylase activity
GOD87_RS04410	COG2066	Belongs to the glutaminase family
GOD87_RS04415	COG2207	Transcriptional regulator
GOD87_RS04420	COG2223	nitrite transmembrane transporter activity
GOD87_RS04435	COG0583	DNA-binding transcription factor activity
GOD87_RS04440	COG1028	Short-chain dehydrogenase reductase Sdr
GOD87_RS04445	COG2271	Major facilitator Superfamily
GOD87_RS04450	COG3959	Transketolase, thiamine diphosphate binding domain
GOD87_RS04455	COG3958	Transketolase
GOD87_RS04465	COG0306	phosphate transporter
GOD87_RS04485	COG1262	PFAM Formylglycine-generating sulfatase enzyme
GOD87_RS04530	COG4181	ATPase activity
GOD87_RS04535	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
GOD87_RS04565	COG0583	DNA-binding transcription factor activity
GOD87_RS04575	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
GOD87_RS04580	COG1773	rubredoxin
GOD87_RS04630	COG2851	Citrate transporter
GOD87_RS04635	COG1253	flavin adenine dinucleotide binding
GOD87_RS04675	COG0804	urea catabolic process
GOD87_RS04685	COG0830	nickel cation binding
GOD87_RS04700	COG0742	ribosomal rna small subunit methyltransferase
GOD87_RS04705	COG0768	penicillin binding
GOD87_RS04730	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
GOD87_RS04735	COG2878	Part of a membrane complex involved in electron transport
GOD87_RS04740	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
GOD87_RS04750	COG3384	dioxygenase
GOD87_RS04775	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
GOD87_RS04815	COG0006	proline dipeptidase activity
GOD87_RS04820	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
GOD87_RS04825	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
GOD87_RS04845	COG1279	arginine transmembrane transporter activity
GOD87_RS04850	COG0583	DNA-binding transcription factor activity
GOD87_RS04890	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
GOD87_RS04895	COG0741	lytic transglycosylase activity
GOD87_RS04895	COG1388	LysM domain
GOD87_RS04895	COG1388	LysM domain
GOD87_RS04895	COG0741	lytic transglycosylase activity
GOD87_RS04905	COG4174	ABC transporter (Permease)
GOD87_RS04910	COG4239	(ABC) transporter, permease
GOD87_RS04915	COG4172	Belongs to the ABC transporter superfamily
GOD87_RS04935	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
GOD87_RS04945	COG4251	negative regulation of phosphorylation
GOD87_RS04945	COG2203	Gaf domain
GOD87_RS04945	COG3706	GGDEF domain
GOD87_RS04945	COG5001	Diguanylate cyclase
GOD87_RS04955	COG0446	pyridine nucleotide-disulphide oxidoreductase
GOD87_RS04955	COG1902	pentaerythritol trinitrate reductase activity
GOD87_RS04965	COG0582	viral genome integration into host DNA
GOD87_RS05070	COG2814	Major facilitator Superfamily
GOD87_RS05085	COG1230	cation diffusion facilitator family transporter
GOD87_RS05095	COG2015	COG2015, Alkyl sulfatase and related hydrolases
GOD87_RS05105	COG2059	Chromate
GOD87_RS05130	COG4269	membrane
GOD87_RS05170	COG1113	amino acid transport
GOD87_RS05180	COG0531	amino acid
GOD87_RS05200	COG1012	belongs to the aldehyde dehydrogenase family
GOD87_RS05220	COG1113	amino acid transport
GOD87_RS05245	COG0697	spore germination
GOD87_RS05250	COG2721	sulfolactate sulfo-lyase activity
GOD87_RS05255	COG2271	Major facilitator Superfamily
GOD87_RS05260	COG4948	Mandelate Racemase Muconate Lactonizing
GOD87_RS05270	COG1012	belongs to the aldehyde dehydrogenase family
GOD87_RS05275	COG2186	Transcriptional regulator
GOD87_RS05300	COG3293	Transposase
GOD87_RS05310	COG1960	acyl-CoA dehydrogenase activity
GOD87_RS05320	COG1012	belongs to the aldehyde dehydrogenase family
GOD87_RS05325	COG1024	Enoyl-CoA hydratase
GOD87_RS05330	COG2814	Major facilitator Superfamily
GOD87_RS05345	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
GOD87_RS05360	COG1262	PFAM Formylglycine-generating sulfatase enzyme
GOD87_RS05405	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
GOD87_RS05410	COG2072	flavoprotein involved in K transport
GOD87_RS05415	COG0300	oxidoreductase activity
GOD87_RS05425	COG1309	transcriptional regulator
GOD87_RS05430	COG1741	Belongs to the pirin family
GOD87_RS05445	COG2072	flavoprotein involved in K transport
GOD87_RS05455	COG2252	PERMEase
GOD87_RS05460	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
GOD87_RS05465	COG3038	cytochrome b561
GOD87_RS05475	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
GOD87_RS05485	COG0527	aspartate kinase activity
GOD87_RS05775	COG1196	nuclear chromosome segregation
GOD87_RS05775	COG0741	lytic transglycosylase activity
GOD87_RS05775	COG0739	heme binding
GOD87_RS05825	COG2194	sulfuric ester hydrolase activity
GOD87_RS05830	COG0582	viral genome integration into host DNA
GOD87_RS05840	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
GOD87_RS05850	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
GOD87_RS05865	COG0667	Aldo Keto reductase
GOD87_RS05875	COG1765	OsmC-like protein
GOD87_RS05890	COG0542	response to heat
GOD87_RS05925	COG2885	chlorophyll binding
GOD87_RS05935	COG0625	glutathione transferase activity
GOD87_RS05940	COG0220	tRNA (guanine-N7-)-methyltransferase activity
GOD87_RS05960	COG3634	alkyl hydroperoxide reductase activity
GOD87_RS05970	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
GOD87_RS05980	COG0450	alkyl hydroperoxide reductase
GOD87_RS05985	COG1643	Atp-dependent helicase
GOD87_RS06000	COG2814	Major facilitator Superfamily
GOD87_RS06005	COG3135	benzoate transporter
GOD87_RS06010	COG1028	Short-chain dehydrogenase reductase Sdr
GOD87_RS06015	COG0543	2 iron, 2 sulfur cluster binding
GOD87_RS06015	COG0633	Ferredoxin
GOD87_RS06020	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
GOD87_RS06025	COG4638	Rieske (2fe-2S)
GOD87_RS06030	COG0583	DNA-binding transcription factor activity
GOD87_RS06040	COG2871	sodium ion transport
GOD87_RS06120	COG1570	exodeoxyribonuclease VII activity
GOD87_RS06150	COG1280	lysine exporter protein (LysE YggA)
GOD87_RS06155	COG1278	Cold shock
GOD87_RS06190	COG2814	Major facilitator Superfamily
GOD87_RS06230	COG0517	IMP dehydrogenase activity
GOD87_RS06230	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
GOD87_RS06235	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
GOD87_RS06245	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
GOD87_RS06250	COG1137	ATPase activity
GOD87_RS06260	COG1538	Outer membrane efflux protein
GOD87_RS06290	COG4122	O-methyltransferase activity
GOD87_RS06300	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
GOD87_RS06315	COG1522	sequence-specific DNA binding
GOD87_RS06320	COG5006	permease, DMT superfamily
GOD87_RS06330	COG1560	Kdo2-lipid A biosynthetic process
GOD87_RS06350	COG2814	Major facilitator Superfamily
GOD87_RS06360	COG2515	1-aminocyclopropane-1-carboxylate deaminase
GOD87_RS06365	COG1116	anion transmembrane transporter activity
GOD87_RS06370	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
GOD87_RS06375	COG4521	taurine ABC transporter
GOD87_RS06395	COG1250	3-hydroxyacyl-CoA dehydrogenase
GOD87_RS06425	COG0583	DNA-binding transcription factor activity
GOD87_RS06430	COG1914	H( )-stimulated, divalent metal cation uptake system
GOD87_RS06450	COG4770	biotin carboxylase activity
GOD87_RS06455	COG0038	chloride channel
GOD87_RS06465	COG1309	transcriptional regulator
GOD87_RS06475	COG1063	alcohol dehydrogenase
GOD87_RS06490	COG0439	Biotin carboxylase
GOD87_RS06495	COG2249	NAD(P)H dehydrogenase (quinone) activity
GOD87_RS06500	COG1733	regulation of RNA biosynthetic process
GOD87_RS06515	COG0864	Transcriptional regulator
GOD87_RS06525	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
GOD87_RS06530	COG1116	anion transmembrane transporter activity
GOD87_RS06595	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
GOD87_RS06605	COG0789	Transcriptional regulator
GOD87_RS06615	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
GOD87_RS06635	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
GOD87_RS06660	COG1012	belongs to the aldehyde dehydrogenase family
GOD87_RS06665	COG0531	amino acid
GOD87_RS06670	COG1760	l-serine dehydratase
GOD87_RS06675	COG1012	belongs to the aldehyde dehydrogenase family
GOD87_RS06675	COG2030	dehydratase
GOD87_RS06680	COG3396	Phenylacetate-CoA oxygenase
GOD87_RS06685	COG3460	Phenylacetate-CoA oxygenase
GOD87_RS06690	COG3396	Phenylacetate-CoA oxygenase
GOD87_RS06695	COG2151	metal-sulfur cluster biosynthetic enzyme
GOD87_RS06700	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
GOD87_RS06705	COG1024	Enoyl-CoA hydratase
GOD87_RS06710	COG1024	Enoyl-CoA hydratase
GOD87_RS06715	COG1250	3-hydroxyacyl-CoA dehydrogenase
GOD87_RS06720	COG0183	Belongs to the thiolase family
GOD87_RS06725	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
GOD87_RS06730	COG3327	negative regulation of DNA-templated transcription, initiation
GOD87_RS06740	COG2050	protein possibly involved in aromatic compounds catabolism
GOD87_RS06750	COG0556	nucleotide-excision repair
GOD87_RS06760	COG1733	regulation of RNA biosynthetic process
GOD87_RS06765	COG0753	catalase activity
GOD87_RS06770	COG3038	cytochrome b561
GOD87_RS06790	COG2267	carboxylic ester hydrolase activity
GOD87_RS06795	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
GOD87_RS06800	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
GOD87_RS06805	COG1012	belongs to the aldehyde dehydrogenase family
GOD87_RS06815	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
GOD87_RS06825	COG1012	belongs to the aldehyde dehydrogenase family
GOD87_RS06830	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
GOD87_RS06835	COG0583	DNA-binding transcription factor activity
GOD87_RS06845	COG1414	Transcriptional regulator
GOD87_RS06850	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
GOD87_RS06860	COG1840	ABC-type Fe3 transport system, periplasmic component
GOD87_RS06865	COG3842	ATPase activity
GOD87_RS06880	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
GOD87_RS06885	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
GOD87_RS06890	COG2814	Major facilitator Superfamily
GOD87_RS06895	COG1960	acyl-CoA dehydrogenase activity
GOD87_RS06900	COG1804	L-carnitine dehydratase bile acid-inducible protein F
GOD87_RS06910	COG1024	Enoyl-CoA hydratase
GOD87_RS06925	COG2814	Major facilitator Superfamily
GOD87_RS06935	COG0183	Belongs to the thiolase family
GOD87_RS06940	COG1250	3-hydroxyacyl-CoA dehydrogenase
GOD87_RS06945	COG1028	Short-chain dehydrogenase reductase Sdr
GOD87_RS06950	COG1024	Enoyl-CoA hydratase
GOD87_RS06955	COG1960	acyl-CoA dehydrogenase activity
GOD87_RS06960	COG2814	Major facilitator Superfamily
GOD87_RS06965	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
GOD87_RS06970	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
GOD87_RS06980	COG2814	Major facilitator Superfamily
GOD87_RS07005	COG0583	DNA-binding transcription factor activity
GOD87_RS07015	COG4770	biotin carboxylase activity
GOD87_RS07020	COG1024	Enoyl-CoA hydratase
GOD87_RS07025	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
GOD87_RS07030	COG1960	acyl-CoA dehydrogenase activity
GOD87_RS07035	COG1309	transcriptional regulator
GOD87_RS07040	COG0318	PFAM AMP-dependent synthetase and ligase
GOD87_RS07060	COG0583	DNA-binding transcription factor activity
GOD87_RS07105	COG1028	Short-chain dehydrogenase reductase Sdr
GOD87_RS07125	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
GOD87_RS07145	COG2205	protein histidine kinase activity
GOD87_RS07145	COG0784	Response regulator, receiver
GOD87_RS07165	COG0765	amino acid transport
GOD87_RS07170	COG0765	amino acid transport
GOD87_RS07175	COG1126	abc transporter atp-binding protein
GOD87_RS07180	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
GOD87_RS07185	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
GOD87_RS07200	COG1280	lysine exporter protein (LysE YggA)
GOD87_RS07205	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
GOD87_RS07210	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
GOD87_RS07215	COG1045	serine acetyltransferase
GOD87_RS07230	COG0583	DNA-binding transcription factor activity
GOD87_RS07235	COG0625	glutathione transferase activity
GOD87_RS07240	COG0625	glutathione transferase activity
GOD87_RS07245	COG0583	DNA-binding transcription factor activity
GOD87_RS07250	COG1380	Effector of murein hydrolase LrgA
GOD87_RS07255	COG1346	cytolysis
GOD87_RS07275	COG2814	Major facilitator Superfamily
GOD87_RS07285	COG0583	DNA-binding transcription factor activity
GOD87_RS07295	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
GOD87_RS07300	COG3052	prosthetic group binding
GOD87_RS07320	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
GOD87_RS07340	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
GOD87_RS07350	COG1294	oxidase, subunit
GOD87_RS07355	COG1271	oxidase subunit
GOD87_RS07375	COG0477	Major facilitator Superfamily
GOD87_RS07385	COG4521	taurine ABC transporter
GOD87_RS07390	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
GOD87_RS07395	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
GOD87_RS07400	COG2175	clavaminate synthase activity
GOD87_RS07410	COG1953	Uracil, thiamine, allantoin
GOD87_RS07420	COG0583	DNA-binding transcription factor activity
GOD87_RS07430	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
GOD87_RS07445	COG0640	Transcriptional regulator
GOD87_RS07450	COG0798	PFAM Bile acid sodium symporter
GOD87_RS07455	COG0583	DNA-binding transcription factor activity
GOD87_RS07470	COG3634	alkyl hydroperoxide reductase activity
GOD87_RS07505	COG1301	dicarboxylic acid transport
GOD87_RS07510	COG0436	Aminotransferase
GOD87_RS07520	COG0386	Belongs to the glutathione peroxidase family
GOD87_RS07560	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
GOD87_RS07585	COG0012	GTP binding
GOD87_RS07590	COG2011	ABC-type metal ion transport system permease component
GOD87_RS07595	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
GOD87_RS07605	COG1464	Belongs to the NlpA lipoprotein family
GOD87_RS07635	COG0765	amino acid transport
GOD87_RS07640	COG0765	amino acid transport
GOD87_RS07645	COG1126	abc transporter atp-binding protein
GOD87_RS07685	COG1309	transcriptional regulator
GOD87_RS07705	COG0583	DNA-binding transcription factor activity
GOD87_RS07715	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
GOD87_RS07725	COG0697	spore germination
GOD87_RS07755	COG3121	Chaperone
GOD87_RS07760	COG3539	Fimbrial protein
GOD87_RS07785	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
GOD87_RS07785	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
GOD87_RS07830	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
GOD87_RS07840	COG2353	YceI-like domain
GOD87_RS07850	COG3698	Phosphodiester glycosidase
GOD87_RS07865	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
GOD87_RS07870	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
GOD87_RS07870	COG0506	proline dehydrogenase activity
GOD87_RS07870	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
GOD87_RS07880	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
GOD87_RS07885	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
GOD87_RS07905	COG1132	(ABC) transporter
GOD87_RS07910	COG3122	Protein conserved in bacteria
GOD87_RS07915	COG3619	membrane
GOD87_RS07925	COG0640	Transcriptional regulator
GOD87_RS07935	COG2850	peptidyl-arginine hydroxylation
GOD87_RS07940	COG0424	maF-like protein
GOD87_RS07960	COG0191	fructose-bisphosphate aldolase activity
GOD87_RS07965	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
GOD87_RS07980	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
GOD87_RS07990	COG1192	Involved in chromosome partitioning
GOD87_RS07995	COG1475	DNA binding
GOD87_RS08000	COG0811	peptide transport
GOD87_RS08010	COG1132	(ABC) transporter
GOD87_RS08015	COG1663	tetraacyldisaccharide 4'-kinase activity
GOD87_RS08035	COG0084	hydrolase, TatD family'
GOD87_RS08100	COG0776	regulation of translation
GOD87_RS08130	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
GOD87_RS08135	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
GOD87_RS08175	COG4166	transmembrane transport
GOD87_RS08185	COG0339	signal peptide processing
GOD87_RS08195	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
GOD87_RS08230	COG0702	epimerase
GOD87_RS08235	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
GOD87_RS08255	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
GOD87_RS08285	COG0316	Belongs to the HesB IscA family
GOD87_RS08290	COG0822	iron-sulfur transferase activity
GOD87_RS08315	COG0776	regulation of translation
GOD87_RS08320	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
GOD87_RS08325	COG2207	Transcriptional regulator
GOD87_RS08330	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
GOD87_RS08335	COG1960	acyl-CoA dehydrogenase activity
GOD87_RS08340	COG1960	acyl-CoA dehydrogenase activity
GOD87_RS08355	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
GOD87_RS08370	COG2814	Major facilitator Superfamily
GOD87_RS08375	COG4264	IucA IucC family
GOD87_RS08380	COG4264	IucA IucC family
GOD87_RS08390	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
GOD87_RS08435	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
GOD87_RS08440	COG0406	alpha-ribazole phosphatase activity
GOD87_RS08455	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
GOD87_RS08460	COG0730	response to heat
GOD87_RS08480	COG4773	Receptor
GOD87_RS08485	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
GOD87_RS08500	COG1131	(ABC) transporter
GOD87_RS08505	COG0842	Transport permease protein
GOD87_RS08510	COG0842	Transport permease protein
GOD87_RS08565	COG2226	methyltransferase
GOD87_RS08590	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
GOD87_RS08625	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
GOD87_RS08635	COG0133	tryptophan synthase activity
GOD87_RS08650	COG3706	GGDEF domain
GOD87_RS08665	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
GOD87_RS08670	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
GOD87_RS08675	COG0022	dehydrogenase e1 component
GOD87_RS08680	COG0508	dehydrogenase complex catalyzes the overall conversion of
GOD87_RS08685	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
GOD87_RS08695	COG1063	alcohol dehydrogenase
GOD87_RS08700	COG3781	membrane
GOD87_RS08710	COG3453	Protein conserved in bacteria
GOD87_RS08710	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
GOD87_RS08720	COG0730	response to heat
GOD87_RS08735	COG3708	Transcriptional regulator
GOD87_RS08735	COG2207	Transcriptional regulator
GOD87_RS08740	COG1733	regulation of RNA biosynthetic process
GOD87_RS08745	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
GOD87_RS08755	COG2188	Transcriptional regulator
GOD87_RS08770	COG4521	taurine ABC transporter
GOD87_RS08775	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
GOD87_RS08795	COG0477	Major facilitator Superfamily
GOD87_RS08805	COG1027	Aspartate ammonia-lyase
GOD87_RS08820	COG0583	DNA-binding transcription factor activity
GOD87_RS08825	COG0583	DNA-binding transcription factor activity
GOD87_RS08830	COG0183	Belongs to the thiolase family
GOD87_RS08835	COG2031	fatty acid transporter
GOD87_RS08850	COG0583	DNA-binding transcription factor activity
GOD87_RS08870	COG1309	transcriptional regulator
GOD87_RS08880	COG2610	gluconate transmembrane transporter activity
GOD87_RS08885	COG1028	Short-chain dehydrogenase reductase Sdr
GOD87_RS08890	COG2207	Transcriptional regulator
GOD87_RS08905	COG1028	Short-chain dehydrogenase reductase Sdr
GOD87_RS08915	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
GOD87_RS08930	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
GOD87_RS08930	COG0543	2 iron, 2 sulfur cluster binding
GOD87_RS08935	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
GOD87_RS08940	COG4638	Rieske (2fe-2S)
GOD87_RS08950	COG0725	ABC transporter, periplasmic molybdate-binding protein
GOD87_RS08955	COG4149	molybdate abc transporter
GOD87_RS08960	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
GOD87_RS08965	COG1028	Short-chain dehydrogenase reductase Sdr
GOD87_RS08970	COG1535	isochorismatase
GOD87_RS08970	COG3433	isochorismatase activity
GOD87_RS09035	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
GOD87_RS09050	COG0753	catalase activity
GOD87_RS09060	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
GOD87_RS09085	COG3539	Fimbrial protein
GOD87_RS09100	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
GOD87_RS09105	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
GOD87_RS09110	COG0745	RESPONSE REGULATOR receiver
GOD87_RS09115	COG2205	protein histidine kinase activity
GOD87_RS09125	COG2207	Transcriptional regulator
GOD87_RS09140	COG1028	Short-chain dehydrogenase reductase Sdr
GOD87_RS09145	COG1804	L-carnitine dehydratase bile acid-inducible protein F
GOD87_RS09150	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
GOD87_RS09155	COG2851	Citrate transporter
GOD87_RS09160	COG1414	Transcriptional regulator
GOD87_RS09165	COG0583	DNA-binding transcription factor activity
GOD87_RS09175	COG0477	Major facilitator Superfamily
GOD87_RS09205	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
GOD87_RS09235	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
GOD87_RS09285	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
GOD87_RS09305	COG1120	ATPase activity
GOD87_RS09310	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
GOD87_RS09320	COG1064	alcohol dehydrogenase
GOD87_RS09325	COG2207	Transcriptional regulator
GOD87_RS09330	COG2084	Dehydrogenase
GOD87_RS09340	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
GOD87_RS09345	COG0583	DNA-binding transcription factor activity
GOD87_RS09355	COG0129	dihydroxy-acid dehydratase activity
GOD87_RS09360	COG1012	belongs to the aldehyde dehydrogenase family
GOD87_RS09375	COG1566	PFAM secretion protein HlyD family protein
GOD87_RS09400	COG2831	hemolysin activation secretion protein
GOD87_RS09420	COG0583	DNA-binding transcription factor activity
GOD87_RS09435	COG2188	Transcriptional regulator
GOD87_RS09480	COG0318	PFAM AMP-dependent synthetase and ligase
GOD87_RS09490	COG1960	acyl-CoA dehydrogenase activity
GOD87_RS09500	COG1028	Short-chain dehydrogenase reductase Sdr
GOD87_RS09505	COG1028	Short-chain dehydrogenase reductase Sdr
GOD87_RS09510	COG1028	Short-chain dehydrogenase reductase Sdr
GOD87_RS09515	COG0583	DNA-binding transcription factor activity
GOD87_RS09520	COG1309	transcriptional regulator
GOD87_RS09545	COG0789	Transcriptional regulator
GOD87_RS09560	COG1902	pentaerythritol trinitrate reductase activity
GOD87_RS09560	COG0446	pyridine nucleotide-disulphide oxidoreductase
GOD87_RS09575	COG1012	belongs to the aldehyde dehydrogenase family
GOD87_RS09595	COG2186	Transcriptional regulator
GOD87_RS09605	COG0583	DNA-binding transcription factor activity
GOD87_RS09610	COG4948	Mandelate Racemase Muconate Lactonizing
GOD87_RS09615	COG4829	muconolactone delta-isomerase
GOD87_RS09625	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
GOD87_RS09630	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
GOD87_RS09635	COG0183	Belongs to the thiolase family
GOD87_RS09640	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
GOD87_RS09650	COG1012	belongs to the aldehyde dehydrogenase family
GOD87_RS09660	COG3733	amine oxidase
GOD87_RS09670	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
GOD87_RS09680	COG1028	Short-chain dehydrogenase reductase Sdr
GOD87_RS09690	COG4638	Rieske (2fe-2S)
GOD87_RS09710	COG0154	amidase activity
GOD87_RS09720	COG2814	Major facilitator Superfamily
GOD87_RS09745	COG1960	acyl-CoA dehydrogenase activity
GOD87_RS09750	COG0583	DNA-binding transcription factor activity
GOD87_RS09755	COG1414	Transcriptional regulator
GOD87_RS09770	COG2391	methyltransferase activity
GOD87_RS09780	COG4993	Dehydrogenase
GOD87_RS09785	COG3659	wide pore channel activity
GOD87_RS09790	COG3420	alginic acid biosynthetic process
GOD87_RS09795	COG0710	3-dehydroquinate dehydratase activity
GOD87_RS09800	COG3485	protocatechuate 3,4-dioxygenase
GOD87_RS09805	COG3485	protocatechuate 3,4-dioxygenase
GOD87_RS09810	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
GOD87_RS09815	COG2271	Major facilitator Superfamily
GOD87_RS09820	COG0596	Alpha beta hydrolase
GOD87_RS09825	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
GOD87_RS09830	COG0183	Belongs to the thiolase family
GOD87_RS09835	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
GOD87_RS09840	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
GOD87_RS09850	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
GOD87_RS09855	COG2323	membrane
GOD87_RS09900	COG0446	pyridine nucleotide-disulphide oxidoreductase
GOD87_RS09900	COG1902	pentaerythritol trinitrate reductase activity
GOD87_RS09925	COG0542	response to heat
GOD87_RS09930	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
GOD87_RS09960	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
GOD87_RS09965	COG0569	domain protein
GOD87_RS09970	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
GOD87_RS09985	COG4774	siderophore transport
GOD87_RS09990	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
GOD87_RS10000	COG1585	Membrane protein implicated in regulation of membrane protease activity
GOD87_RS10015	COG1294	oxidase, subunit
GOD87_RS10020	COG4890	Cyd operon protein YbgT
GOD87_RS10035	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
GOD87_RS10045	COG0552	protein localization to endoplasmic reticulum
GOD87_RS10070	COG0517	IMP dehydrogenase activity
GOD87_RS10070	COG0516	GMP reductase activity
GOD87_RS10075	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
GOD87_RS10080	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
GOD87_RS10090	COG0583	DNA-binding transcription factor activity
GOD87_RS10095	COG0024	Methionine aminopeptidase
GOD87_RS10125	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
GOD87_RS10125	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
GOD87_RS10130	COG1105	Belongs to the carbohydrate kinase PfkB family
GOD87_RS10135	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
GOD87_RS10135	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
GOD87_RS10135	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
GOD87_RS10155	COG3300	MHYT domain
GOD87_RS10155	COG5001	Diguanylate cyclase
GOD87_RS10170	COG2135	peptidase activity
GOD87_RS10175	COG0659	secondary active sulfate transmembrane transporter activity
GOD87_RS10195	COG1113	amino acid transport
GOD87_RS10205	COG1522	sequence-specific DNA binding
GOD87_RS10230	COG1011	Hydrolase
GOD87_RS10235	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
GOD87_RS10245	COG2137	regulation of response to DNA damage stimulus
GOD87_RS10260	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
GOD87_RS10280	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
GOD87_RS10295	COG0575	Belongs to the CDS family
GOD87_RS10300	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
GOD87_RS10325	COG3852	Histidine kinase
GOD87_RS10330	COG2204	response regulator
GOD87_RS10385	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
GOD87_RS10390	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
GOD87_RS10410	COG0697	spore germination
GOD87_RS10415	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
GOD87_RS10425	COG0303	'Molybdopterin
GOD87_RS10430	COG0315	cyclic pyranopterin monophosphate synthase activity
GOD87_RS10430	COG0521	Mo-molybdopterin cofactor biosynthetic process
GOD87_RS10445	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
GOD87_RS10450	COG0243	molybdopterin cofactor binding
GOD87_RS10460	COG0243	molybdopterin cofactor binding
GOD87_RS10465	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
GOD87_RS10470	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
GOD87_RS10470	COG2146	nitrite reductase [NAD(P)H] activity
GOD87_RS10480	COG0745	RESPONSE REGULATOR receiver
GOD87_RS10485	COG1116	anion transmembrane transporter activity
GOD87_RS10485	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
GOD87_RS10505	COG0511	ligase activity, forming carbon-carbon bonds
GOD87_RS10520	COG2814	Major facilitator Superfamily
GOD87_RS10540	COG0069	glutamate synthase activity
GOD87_RS10560	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
GOD87_RS10570	COG1454	alcohol dehydrogenase
GOD87_RS10575	COG0824	Thioesterase
GOD87_RS10585	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
GOD87_RS10600	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
GOD87_RS10605	COG2030	dehydratase
GOD87_RS10615	COG0183	Belongs to the thiolase family
GOD87_RS10625	COG0583	DNA-binding transcription factor activity
GOD87_RS10630	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
GOD87_RS10640	COG1522	sequence-specific DNA binding
GOD87_RS10645	COG3135	benzoate transporter
GOD87_RS10655	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
GOD87_RS10670	COG0589	response to stress
GOD87_RS10675	COG0488	(ABC) transporter
GOD87_RS10695	COG4773	Receptor
GOD87_RS10725	COG0668	transmembrane transport
GOD87_RS10735	COG1309	transcriptional regulator
GOD87_RS10750	COG1605	Chorismate mutase
GOD87_RS10790	COG0308	aminopeptidase N
GOD87_RS10815	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
GOD87_RS10820	COG1454	alcohol dehydrogenase
GOD87_RS10840	COG0531	amino acid
GOD87_RS10845	COG4303	Ethanolamine ammonia lyase large subunit
GOD87_RS10850	COG4302	ethanolamine ammonia-lyase activity
GOD87_RS10855	COG0519	Catalyzes the synthesis of GMP from XMP
GOD87_RS10855	COG0518	GMP synthase (glutamine-hydrolyzing) activity
GOD87_RS10860	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
GOD87_RS10885	COG0697	spore germination
GOD87_RS10890	COG1923	regulation of RNA biosynthetic process
GOD87_RS10900	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
GOD87_RS10905	COG0802	atpase or kinase
GOD87_RS10925	COG1187	pseudouridine synthase activity
GOD87_RS10940	COG0583	DNA-binding transcription factor activity
GOD87_RS10955	COG2814	Major facilitator Superfamily
GOD87_RS10960	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
GOD87_RS10985	COG0729	surface antigen
GOD87_RS11005	COG0174	glutamine synthetase
GOD87_RS11010	COG0745	RESPONSE REGULATOR receiver
GOD87_RS11015	COG2205	protein histidine kinase activity
GOD87_RS11025	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
GOD87_RS11030	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
GOD87_RS11055	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
GOD87_RS11060	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
GOD87_RS11065	COG1960	acyl-CoA dehydrogenase activity
GOD87_RS11095	COG0583	DNA-binding transcription factor activity
GOD87_RS11110	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
GOD87_RS11120	COG3658	cytochrome
GOD87_RS11125	COG1215	transferase activity, transferring glycosyl groups
GOD87_RS11130	COG1649	PFAM Uncharacterised BCR, COG1649
GOD87_RS11130	COG0726	polysaccharide deacetylase
GOD87_RS11155	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
GOD87_RS11160	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
GOD87_RS11170	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
GOD87_RS11195	COG0305	Participates in initiation and elongation during chromosome replication
GOD87_RS11200	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
GOD87_RS11210	COG1305	Transglutaminase-like
GOD87_RS11220	COG2308	Evidence 4 Homologs of previously reported genes of
GOD87_RS11250	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
GOD87_RS11255	COG0138	bifunctional purine biosynthesis protein purh
GOD87_RS11260	COG0151	Belongs to the GarS family
GOD87_RS11265	COG1464	Belongs to the NlpA lipoprotein family
GOD87_RS11270	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
GOD87_RS11275	COG2011	ABC-type metal ion transport system permease component
GOD87_RS11280	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
GOD87_RS11290	COG1301	dicarboxylic acid transport
GOD87_RS11320	COG1794	racemase activity, acting on amino acids and derivatives
GOD87_RS11330	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
GOD87_RS11330	COG3008	intermembrane lipid transfer
GOD87_RS11335	COG2995	paraquat-inducible protein a
GOD87_RS11405	COG2186	Transcriptional regulator
GOD87_RS11415	COG0786	glutamate:sodium symporter activity
GOD87_RS11420	COG3243	poly(R)-hydroxyalkanoic acid synthase
GOD87_RS11445	COG3111	PFAM Bacterial OB fold (BOF) protein
GOD87_RS11545	COG1610	YqeY-like protein
GOD87_RS11550	COG4783	chaperone-mediated protein folding
GOD87_RS11575	COG1286	toxin biosynthetic process
GOD87_RS11605	COG0778	Nitroreductase
GOD87_RS11615	COG0513	Belongs to the DEAD box helicase family
GOD87_RS11635	COG2363	Small membrane protein
GOD87_RS11660	COG1234	tRNA 3'-trailer cleavage
GOD87_RS11665	COG2195	Cleaves the N-terminal amino acid of tripeptides
GOD87_RS11675	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
GOD87_RS11685	COG2819	hydrolase of the alpha beta superfamily
GOD87_RS11690	COG1960	acyl-CoA dehydrogenase activity
GOD87_RS11695	COG1301	dicarboxylic acid transport
GOD87_RS11700	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
GOD87_RS11705	COG3139	Protein of unknown function (DUF1315)
GOD87_RS11710	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
GOD87_RS11715	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
GOD87_RS11725	COG0494	nUDIX hydrolase
GOD87_RS11735	COG0642	Histidine kinase
GOD87_RS11750	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
GOD87_RS11760	COG1720	tRNA m6t6A37 methyltransferase activity
GOD87_RS11775	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
GOD87_RS11780	COG0826	peptidase U32
GOD87_RS11785	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
GOD87_RS11795	COG4598	ABC transporter
GOD87_RS11800	COG4160	amino acid transport
GOD87_RS11805	COG4215	(ABC) transporter
GOD87_RS11820	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
GOD87_RS11865	COG1131	(ABC) transporter
GOD87_RS11870	COG0842	Transport permease protein
GOD87_RS11885	COG0772	Belongs to the SEDS family
GOD87_RS11890	COG2951	lytic endotransglycosylase activity
GOD87_RS11915	COG2207	Transcriptional regulator
GOD87_RS11930	COG0052	Belongs to the universal ribosomal protein uS2 family
GOD87_RS11935	COG0024	Methionine aminopeptidase
GOD87_RS11945	COG2223	nitrite transmembrane transporter activity
GOD87_RS11955	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
GOD87_RS11960	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
GOD87_RS11965	COG1960	acyl-CoA dehydrogenase activity
GOD87_RS11980	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
GOD87_RS11985	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
GOD87_RS11990	COG1385	rRNA (uridine-N3-)-methyltransferase activity
GOD87_RS12010	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
GOD87_RS12015	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
GOD87_RS12020	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
GOD87_RS12055	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
GOD87_RS12065	COG0174	glutamine synthetase
GOD87_RS12080	COG0512	Glutamine amidotransferase of anthranilate synthase
GOD87_RS12085	COG0308	aminopeptidase N
GOD87_RS12115	COG1529	Aldehyde oxidase and xanthine dehydrogenase
GOD87_RS12125	COG0302	gtp cyclohydrolase
GOD87_RS12145	COG3739	integral membrane protein
GOD87_RS12160	COG1169	isochorismate synthase
GOD87_RS12170	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
GOD87_RS12175	COG1132	(ABC) transporter
GOD87_RS12180	COG1132	(ABC) transporter
GOD87_RS12195	COG3433	isochorismatase activity
GOD87_RS12195	COG1535	isochorismatase
GOD87_RS12200	COG1021	2,3-dihydroxybenzoate-AMP ligase
GOD87_RS12205	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
GOD87_RS12215	COG4774	siderophore transport
GOD87_RS12220	COG4607	ABC-type enterochelin transport system periplasmic component
GOD87_RS12225	COG4604	ABC transporter, ATP-binding protein
GOD87_RS12230	COG4605	iron ion homeostasis
GOD87_RS12235	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
GOD87_RS12240	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
GOD87_RS12255	COG2964	Protein conserved in bacteria
GOD87_RS12265	COG1741	Belongs to the pirin family
GOD87_RS12280	COG1309	transcriptional regulator
GOD87_RS12290	COG4948	Mandelate Racemase Muconate Lactonizing
GOD87_RS12295	COG2814	Major facilitator Superfamily
GOD87_RS12330	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
GOD87_RS12330	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
GOD87_RS12335	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
GOD87_RS12340	COG1012	belongs to the aldehyde dehydrogenase family
GOD87_RS12355	COG0477	Major facilitator Superfamily
GOD87_RS12360	COG0006	proline dipeptidase activity
GOD87_RS12365	COG1902	pentaerythritol trinitrate reductase activity
GOD87_RS12370	COG0583	DNA-binding transcription factor activity
GOD87_RS12380	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
GOD87_RS12390	COG0596	Alpha beta hydrolase
GOD87_RS12405	COG0583	DNA-binding transcription factor activity
GOD87_RS12410	COG1335	isochorismatase
GOD87_RS12450	COG2879	small protein
GOD87_RS12455	COG1966	Carbon starvation protein
GOD87_RS12475	COG4943	cyclic-guanylate-specific phosphodiesterase activity
GOD87_RS12500	COG1067	ATP-dependent peptidase activity
GOD87_RS12505	COG0583	DNA-binding transcription factor activity
GOD87_RS12530	COG1686	Belongs to the peptidase S11 family
GOD87_RS12535	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
GOD87_RS12570	COG0616	signal peptide processing
GOD87_RS12575	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
GOD87_RS12585	COG0573	inorganic phosphate transmembrane transporter activity
GOD87_RS12590	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
GOD87_RS12595	COG1113	amino acid transport
GOD87_RS12600	COG3961	Belongs to the TPP enzyme family
GOD87_RS12605	COG1522	sequence-specific DNA binding
GOD87_RS12615	COG0076	glutamate decarboxylase activity
GOD87_RS12620	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
GOD87_RS12625	COG3293	Transposase
GOD87_RS12635	COG1309	transcriptional regulator
GOD87_RS12650	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
GOD87_RS12685	COG0352	thiamine-phosphate diphosphorylase activity
GOD87_RS12710	COG0612	Peptidase, M16
GOD87_RS12720	COG1823	symporter activity
GOD87_RS12725	COG0583	DNA-binding transcription factor activity
GOD87_RS12730	COG0477	Major facilitator Superfamily
GOD87_RS12755	COG1187	pseudouridine synthase activity
GOD87_RS12770	COG1686	Belongs to the peptidase S11 family
GOD87_RS12775	COG1252	NADH dehydrogenase
GOD87_RS12785	COG0415	Belongs to the DNA photolyase family
GOD87_RS12800	COG1215	transferase activity, transferring glycosyl groups
GOD87_RS12830	COG2070	2-Nitropropane dioxygenase
GOD87_RS12885	COG0556	nucleotide-excision repair
GOD87_RS12905	COG0436	Aminotransferase
GOD87_RS12935	COG4221	oxidoreductase activity
GOD87_RS12945	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
GOD87_RS12950	COG1381	Involved in DNA repair and RecF pathway recombination
GOD87_RS12960	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
GOD87_RS12975	COG0681	Belongs to the peptidase S26 family
GOD87_RS12990	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
GOD87_RS13010	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
GOD87_RS13015	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
GOD87_RS13020	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
GOD87_RS13030	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
GOD87_RS13035	COG4208	sulfate ABC transporter
GOD87_RS13040	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
GOD87_RS13045	COG0583	DNA-binding transcription factor activity
GOD87_RS13050	COG4625	pathogenesis
GOD87_RS13065	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
GOD87_RS13080	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
GOD87_RS13090	COG1051	belongs to the nudix hydrolase family
GOD87_RS13090	COG1056	cytidyltransferase-related domain
GOD87_RS13095	COG1024	Enoyl-CoA hydratase
GOD87_RS13105	COG2814	Major facilitator Superfamily
GOD87_RS13110	COG0047	phosphoribosylformylglycinamidine synthase activity
GOD87_RS13110	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
GOD87_RS13130	COG1473	amidohydrolase
GOD87_RS13135	COG0824	Thioesterase
GOD87_RS13155	COG0823	Involved in the tonB-independent uptake of proteins
GOD87_RS13175	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
GOD87_RS13210	COG0628	permease
GOD87_RS13220	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
GOD87_RS13225	COG0596	Alpha beta hydrolase
GOD87_RS13230	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
GOD87_RS13230	COG0616	signal peptide processing
GOD87_RS13240	COG2333	competence protein COMEC
GOD87_RS13240	COG0658	competence protein
GOD87_RS13245	COG1136	(ABC) transporter
GOD87_RS13250	COG4591	ABC-type transport system involved in lipoprotein release permease component
GOD87_RS13280	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
GOD87_RS13300	COG0463	Glycosyl transferase, family 2
GOD87_RS13335	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
GOD87_RS13340	COG1280	lysine exporter protein (LysE YggA)
GOD87_RS13345	COG2267	carboxylic ester hydrolase activity
GOD87_RS13355	COG0019	diaminopimelate decarboxylase activity
GOD87_RS13365	COG1113	amino acid transport
GOD87_RS13380	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
GOD87_RS13390	COG3339	Conserved Protein
GOD87_RS13395	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
GOD87_RS13400	COG0243	molybdopterin cofactor binding
GOD87_RS13405	COG1929	Belongs to the glycerate kinase type-1 family
GOD87_RS13420	COG0778	Nitroreductase
GOD87_RS13455	COG3811	Belongs to the UPF0386 family
GOD87_RS13465	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
GOD87_RS13480	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
GOD87_RS13500	COG0741	lytic transglycosylase activity
GOD87_RS13520	COG0584	glycerophosphoryl diester phosphodiesterase
GOD87_RS13525	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
GOD87_RS13550	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
GOD87_RS13555	COG1597	lipid kinase activity
GOD87_RS13570	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
GOD87_RS13575	COG0477	Major facilitator Superfamily
GOD87_RS13625	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
GOD87_RS13630	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
GOD87_RS13655	COG0505	Belongs to the CarA family
GOD87_RS13670	COG1309	transcriptional regulator
GOD87_RS13675	COG0251	oxidation-reduction process
GOD87_RS13685	COG0589	response to stress
GOD87_RS13700	COG2843	Capsule synthesis protein
GOD87_RS13735	COG2321	neutral zinc metallopeptidase
GOD87_RS13740	COG2354	Protein conserved in bacteria
GOD87_RS13760	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
GOD87_RS13785	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
GOD87_RS13790	COG1053	succinate dehydrogenase
GOD87_RS13795	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
GOD87_RS13800	COG2009	succinate dehydrogenase
GOD87_RS13845	COG2921	Belongs to the UPF0250 family
GOD87_RS13850	COG0321	lipoyl(octanoyl) transferase activity
GOD87_RS13865	COG0531	amino acid
GOD87_RS13880	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
GOD87_RS13885	COG1648	precorrin-2 dehydrogenase activity
GOD87_RS13885	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
GOD87_RS13900	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
GOD87_RS13930	COG0671	phosphoesterase, PA-phosphatase related
GOD87_RS13935	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
GOD87_RS13945	COG1538	Outer membrane efflux protein
GOD87_RS13950	COG0393	Putative heavy-metal-binding
GOD87_RS13955	COG0393	Putative heavy-metal-binding
GOD87_RS13965	COG1028	Short-chain dehydrogenase reductase Sdr
GOD87_RS13975	COG0525	valine-tRNA ligase activity
GOD87_RS13995	COG0583	DNA-binding transcription factor activity
GOD87_RS14000	COG0004	ammonium transporteR
GOD87_RS14010	COG0642	Histidine kinase
GOD87_RS14015	COG0745	RESPONSE REGULATOR receiver
GOD87_RS14020	COG2194	sulfuric ester hydrolase activity
GOD87_RS14040	COG1752	Esterase of the alpha-beta hydrolase superfamily
GOD87_RS14055	COG2315	Protein conserved in bacteria
GOD87_RS14060	COG0142	geranyltranstransferase activity
GOD87_RS14065	COG2828	Protein conserved in bacteria
GOD87_RS14070	COG1113	amino acid transport
GOD87_RS14080	COG0582	viral genome integration into host DNA
GOD87_RS14110	COG0305	Participates in initiation and elongation during chromosome replication
GOD87_RS14160	COG0464	growth
GOD87_RS14180	COG2207	Transcriptional regulator
GOD87_RS14205	COG2249	NAD(P)H dehydrogenase (quinone) activity
GOD87_RS14215	COG0560	Phosphoserine phosphatase
GOD87_RS14225	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
GOD87_RS14235	COG1530	ribonuclease E activity
GOD87_RS14240	COG0424	maF-like protein
GOD87_RS14245	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
GOD87_RS14250	COG1792	Involved in formation and maintenance of cell shape
GOD87_RS14255	COG1077	Cell shape determining protein MreB Mrl
GOD87_RS14260	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
GOD87_RS14270	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
GOD87_RS14300	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
GOD87_RS14305	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
GOD87_RS14310	COG1752	Esterase of the alpha-beta hydrolase superfamily
GOD87_RS14315	COG1115	amino acid carrier protein
GOD87_RS14335	COG2814	Major facilitator Superfamily
GOD87_RS14340	COG1289	transmembrane transporter activity
GOD87_RS14350	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
GOD87_RS14390	COG1376	ErfK ybiS ycfS ynhG family protein
GOD87_RS14395	COG2832	Protein of unknown function (DUF454)
GOD87_RS14405	COG5510	response to toxic substance
GOD87_RS14425	COG0840	transmembrane signaling receptor activity
GOD87_RS14465	COG3422	double-strand break repair
GOD87_RS14470	COG2824	Alkylphosphonate utilization operon protein PhnA
GOD87_RS14475	COG3189	MarR family transcriptional regulator
GOD87_RS14485	COG0354	folic acid binding
GOD87_RS14490	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
GOD87_RS14505	COG1902	pentaerythritol trinitrate reductase activity
GOD87_RS14510	COG4772	TonB-dependent receptor
GOD87_RS14515	COG2094	Belongs to the DNA glycosylase MPG family
GOD87_RS14540	COG1217	gtp-binding protein TYPA
GOD87_RS14545	COG2233	PERMEase
GOD87_RS14555	COG0833	amino acid
GOD87_RS14560	COG1690	Belongs to the RtcB family
GOD87_RS14565	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
GOD87_RS14565	COG2885	chlorophyll binding
GOD87_RS14575	COG0183	Belongs to the thiolase family
GOD87_RS14595	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
GOD87_RS14615	COG2207	Transcriptional regulator
GOD87_RS14620	COG0183	Belongs to the thiolase family
GOD87_RS14650	COG1272	protein, Hemolysin III
GOD87_RS14655	COG0477	Major facilitator Superfamily
GOD87_RS14670	COG0450	alkyl hydroperoxide reductase
GOD87_RS14690	COG0285	dihydrofolate synthase activity
GOD87_RS14735	COG4206	TonB-dependent receptor
GOD87_RS14740	COG2096	Adenosyltransferase
GOD87_RS14760	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
GOD87_RS14765	COG0745	RESPONSE REGULATOR receiver
GOD87_RS14770	COG2205	protein histidine kinase activity
GOD87_RS14780	COG1960	acyl-CoA dehydrogenase activity
GOD87_RS14785	COG1960	acyl-CoA dehydrogenase activity
GOD87_RS14835	COG1215	transferase activity, transferring glycosyl groups
GOD87_RS14850	COG1091	dTDP-4-dehydrorhamnose reductase activity
GOD87_RS14865	COG0438	transferase activity, transferring glycosyl groups
GOD87_RS14870	COG0726	polysaccharide deacetylase
GOD87_RS14885	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
GOD87_RS14890	COG2205	protein histidine kinase activity
GOD87_RS14930	COG1862	Preprotein translocase
GOD87_RS14940	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
GOD87_RS14945	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
GOD87_RS14955	COG3781	membrane
GOD87_RS14960	COG0613	PHP domain protein
GOD87_RS14970	COG2350	Protein conserved in bacteria
GOD87_RS15000	COG1607	acyl-coa hydrolase
GOD87_RS15060	COG2199	diguanylate cyclase activity
GOD87_RS15070	COG1408	metallophosphoesterase
GOD87_RS15075	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
GOD87_RS15085	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
GOD87_RS15105	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
GOD87_RS15110	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
GOD87_RS15115	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
GOD87_RS15125	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GOD87_RS15135	COG2969	positive regulation of protein catabolic process
GOD87_RS15155	COG1960	acyl-CoA dehydrogenase activity
GOD87_RS15160	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
GOD87_RS15175	COG1309	transcriptional regulator
GOD87_RS15180	COG1960	acyl-CoA dehydrogenase activity
GOD87_RS15225	COG1183	phosphatidylcholine synthase activity
GOD87_RS15230	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
GOD87_RS15260	COG0741	lytic transglycosylase activity
GOD87_RS15260	COG1196	nuclear chromosome segregation
GOD87_RS15260	COG0739	heme binding
GOD87_RS15270	COG1702	phosphate starvation-inducible protein PhoH
GOD87_RS15305	COG1295	ribonuclease BN
GOD87_RS15310	COG0697	spore germination
GOD87_RS15315	COG2169	Transcriptional regulator
GOD87_RS15320	COG0179	Fumarylacetoacetate (FAA) hydrolase
GOD87_RS15365	COG0557	exoribonuclease II activity
GOD87_RS15370	COG0339	signal peptide processing
GOD87_RS15375	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
GOD87_RS15405	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
GOD87_RS15410	COG1960	acyl-CoA dehydrogenase activity
GOD87_RS15565	COG0626	cystathionine gamma-synthase activity
GOD87_RS15570	COG0433	COG0433 Predicted ATPase
GOD87_RS15575	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
GOD87_RS15575	COG1017	nitric oxide dioxygenase activity
GOD87_RS15580	COG1959	2 iron, 2 sulfur cluster binding
GOD87_RS15595	COG1301	dicarboxylic acid transport
GOD87_RS15600	COG1946	Acyl-CoA thioesterase
GOD87_RS15620	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
GOD87_RS15625	COG1040	competence protein
GOD87_RS15630	COG0494	nUDIX hydrolase
GOD87_RS15640	COG0598	Magnesium transport protein CorA
GOD87_RS15650	COG2854	intermembrane phospholipid transfer
GOD87_RS15660	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
GOD87_RS15665	COG1127	ABC transporter
GOD87_RS15675	COG0513	Belongs to the DEAD box helicase family
GOD87_RS15695	COG0408	coproporphyrinogen oxidase activity
GOD87_RS15710	COG1960	acyl-CoA dehydrogenase activity
GOD87_RS15720	COG1983	PspC domain protein
GOD87_RS15725	COG0517	IMP dehydrogenase activity
GOD87_RS15770	COG0583	DNA-binding transcription factor activity
GOD87_RS15810	COG1012	belongs to the aldehyde dehydrogenase family
GOD87_RS15820	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
GOD87_RS15825	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
GOD87_RS15830	COG0833	amino acid
GOD87_RS15860	COG1192	Involved in chromosome partitioning
GOD87_RS15865	COG0628	permease
GOD87_RS15875	COG1289	transmembrane transporter activity
GOD87_RS15890	COG2249	NAD(P)H dehydrogenase (quinone) activity
GOD87_RS15895	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
GOD87_RS15905	COG0277	FAD linked oxidase domain protein
GOD87_RS15910	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
GOD87_RS15935	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
GOD87_RS15940	COG5380	lipid catabolic process
GOD87_RS15960	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
GOD87_RS16010	COG0194	GDP metabolic process
GOD87_RS16025	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
GOD87_RS16045	COG3307	-O-antigen
GOD87_RS16060	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
GOD87_RS16065	COG1704	LemA family
GOD87_RS16075	COG0493	'glutamate synthase
GOD87_RS16080	COG0067	glutamate synthase
GOD87_RS16080	COG0070	glutamate synthase
GOD87_RS16080	COG0069	glutamate synthase activity
GOD87_RS16130	COG2226	methyltransferase
GOD87_RS16145	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
GOD87_RS16150	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
GOD87_RS16195	COG0833	amino acid
GOD87_RS16280	COG0488	(ABC) transporter
GOD87_RS16285	COG2873	o-acetylhomoserine
GOD87_RS16290	COG4221	oxidoreductase activity
GOD87_RS16295	COG0659	secondary active sulfate transmembrane transporter activity
GOD87_RS16320	COG0427	acetyl-CoA hydrolase
GOD87_RS16350	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
GOD87_RS16390	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
GOD87_RS16455	COG2249	NAD(P)H dehydrogenase (quinone) activity
GOD87_RS16460	COG1733	regulation of RNA biosynthetic process
GOD87_RS16485	COG0667	Aldo Keto reductase
GOD87_RS16505	COG0583	DNA-binding transcription factor activity
GOD87_RS16510	COG2814	Major facilitator Superfamily
GOD87_RS16540	COG1335	isochorismatase
GOD87_RS16550	COG1012	belongs to the aldehyde dehydrogenase family
GOD87_RS16555	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
GOD87_RS16565	COG1113	amino acid transport
GOD87_RS16575	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
GOD87_RS16590	COG2814	Major facilitator Superfamily
GOD87_RS16600	COG0351	phosphomethylpyrimidine kinase
GOD87_RS16600	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
GOD87_RS16600	COG0352	thiamine-phosphate diphosphorylase activity
GOD87_RS16620	COG1309	transcriptional regulator
GOD87_RS16625	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
GOD87_RS16645	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
GOD87_RS16655	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
GOD87_RS16660	COG3162	membrane
GOD87_RS16665	COG0784	Response regulator, receiver
GOD87_RS16665	COG2198	Histidine kinase
GOD87_RS16665	COG2205	protein histidine kinase activity
GOD87_RS16690	COG1522	sequence-specific DNA binding
GOD87_RS16695	COG1335	isochorismatase
GOD87_RS16700	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
GOD87_RS16710	COG0668	transmembrane transport
GOD87_RS16715	COG1385	rRNA (uridine-N3-)-methyltransferase activity
GOD87_RS16720	COG1519	Transferase
GOD87_RS16725	COG1902	pentaerythritol trinitrate reductase activity
GOD87_RS16745	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
GOD87_RS16770	COG0426	domain, Protein
GOD87_RS16770	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
GOD87_RS16775	COG4774	siderophore transport
GOD87_RS16780	COG2119	membrane
GOD87_RS16790	COG0508	dehydrogenase complex catalyzes the overall conversion of
GOD87_RS16800	COG4942	peptidase
GOD87_RS16815	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
GOD87_RS16825	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
GOD87_RS16845	COG0189	ligase activity
GOD87_RS16865	COG0708	Exodeoxyribonuclease III
GOD87_RS16870	COG1393	Belongs to the ArsC family
GOD87_RS16885	COG3706	GGDEF domain
GOD87_RS16920	COG2351	hydroxyisourate hydrolase activity
GOD87_RS16925	COG2233	PERMEase
GOD87_RS16935	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
GOD87_RS16945	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
GOD87_RS16950	COG1028	Short-chain dehydrogenase reductase Sdr
GOD87_RS16960	COG3150	esterase
GOD87_RS16995	COG2918	glutathione biosynthetic process
GOD87_RS17010	COG2733	membrane
GOD87_RS17015	COG0436	Aminotransferase
GOD87_RS17020	COG0534	Mate efflux family protein
GOD87_RS17115	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
GOD87_RS17120	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
GOD87_RS17130	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
GOD87_RS17135	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
GOD87_RS17140	COG0546	phosphoglycolate phosphatase activity
GOD87_RS17150	COG0010	Belongs to the arginase family
GOD87_RS17180	COG2188	Transcriptional regulator
GOD87_RS17190	COG0523	cobalamin synthesis protein
GOD87_RS17200	COG1113	amino acid transport
GOD87_RS17210	COG0625	glutathione transferase activity
GOD87_RS17230	COG1683	Conserved Protein
GOD87_RS17235	COG0534	Mate efflux family protein
GOD87_RS17240	COG0385	Bile acid
GOD87_RS17245	COG1335	isochorismatase
GOD87_RS17250	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
GOD87_RS17270	COG2116	formate transmembrane transporter activity
GOD87_RS17275	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
GOD87_RS17280	COG2133	pyrroloquinoline quinone binding
GOD87_RS17285	COG2983	Belongs to the UPF0260 family
GOD87_RS17295	COG0400	carboxylic ester hydrolase activity
GOD87_RS17305	COG1194	a g-specific adenine glycosylase
GOD87_RS17320	COG2818	Glycosylase
GOD87_RS17325	COG1064	alcohol dehydrogenase
GOD87_RS17330	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
GOD87_RS17345	COG0583	DNA-binding transcription factor activity
GOD87_RS17350	COG0656	L-ascorbic acid biosynthetic process
GOD87_RS17355	COG2814	Major facilitator Superfamily
GOD87_RS17390	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
GOD87_RS17405	COG2233	PERMEase
GOD87_RS17410	COG0583	DNA-binding transcription factor activity
GOD87_RS17445	COG0733	neurotransmitter:sodium symporter activity
GOD87_RS17455	COG0625	glutathione transferase activity
GOD87_RS17485	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
GOD87_RS17490	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
GOD87_RS17495	COG0596	Alpha beta hydrolase
GOD87_RS17520	COG0488	(ABC) transporter
GOD87_RS17525	COG0586	Pfam SNARE associated Golgi protein
GOD87_RS17535	COG0187	DNA topoisomerase II activity
GOD87_RS17545	COG0592	DNA-directed DNA polymerase activity
GOD87_RS17570	COG0706	membrane insertase activity
GOD87_RS17585	COG1230	cation diffusion facilitator family transporter
GOD87_RS17590	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
GOD87_RS17605	COG0402	S-adenosylhomocysteine deaminase activity
GOD87_RS17615	COG0754	glutathionylspermidine amidase activity
GOD87_RS17625	COG0861	Integral membrane protein TerC family
GOD87_RS17630	COG0671	phosphoesterase, PA-phosphatase related
GOD87_RS17640	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
GOD87_RS17655	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
GOD87_RS17660	COG2951	lytic endotransglycosylase activity
GOD87_RS17710	COG0657	acetylesterase activity
GOD87_RS17715	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
GOD87_RS17755	COG1047	Peptidyl-prolyl cis-trans
GOD87_RS17765	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
GOD87_RS17770	COG0196	riboflavin kinase activity
GOD87_RS17780	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
GOD87_RS17785	COG1309	transcriptional regulator
GOD87_RS17790	COG1116	anion transmembrane transporter activity
GOD87_RS17795	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
GOD87_RS17800	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
GOD87_RS17805	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
GOD87_RS17810	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
GOD87_RS17830	COG1028	Short-chain dehydrogenase reductase Sdr
GOD87_RS17835	COG0546	phosphoglycolate phosphatase activity
GOD87_RS17860	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GOD87_RS17900	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
GOD87_RS18020	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
GOD87_RS18070	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
GOD87_RS18090	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
GOD87_RS18270	COG0358	DNA primase activity
GOD87_RS18330	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
GOD87_RS18380	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
GOD87_RS18380	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
GOD87_RS18385	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
GOD87_RS18430	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GOD87_RS18430	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes