A4U85_RS00005	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
A4U85_RS00010	SM00480	DNA polymerase III beta subunit
A4U85_RS00020	SM00387	Histidine kinase-like ATPases
A4U85_RS00020	SM00433	TopoisomeraseII
A4U85_RS00035	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS00185	SM00271	DnaJ molecular chaperone homology domain
A4U85_RS00225	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4U85_RS00230	SM00829	Enoylreductase
A4U85_RS00250	SM00478	endonuclease III
A4U85_RS00250	SM00525	A4U85_RS00250
A4U85_RS00280	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS00305	SM01130	A4U85_RS00305
A4U85_RS00335	SM00346	helix_turn_helix isocitrate lyase regulation
A4U85_RS00365	SM00833	Cobalamin synthesis protein cobW C-terminal domain
A4U85_RS00375	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4U85_RS00375	SM00866	A4U85_RS00375
A4U85_RS00490	SM01060	A4U85_RS00490
A4U85_RS00495	SM00248	ankyrin repeats
A4U85_RS00505	SM00450	Rhodanese Homology Domain
A4U85_RS00520	SM00387	Histidine kinase-like ATPases
A4U85_RS00520	SM00388	His Kinase A (phosphoacceptor) domain
A4U85_RS00525	SM00448	cheY-homologous receiver domain
A4U85_RS00525	SM00862	Transcriptional regulatory protein, C terminal
A4U85_RS00605	SM00387	Histidine kinase-like ATPases
A4U85_RS00605	SM00433	TopoisomeraseII
A4U85_RS00675	SM00267	diguanylate cyclase
A4U85_RS00740	SM00842	Cell division protein FtsA
A4U85_RS00745	SM00864	Tubulin/FtsZ family, GTPase domain
A4U85_RS00745	SM00865	Tubulin/FtsZ family, C-terminal domain
A4U85_RS00790	SM00849	Metallo-beta-lactamase superfamily
A4U85_RS00800	SM00116	Domain in cystathionine beta-synthase and other proteins.
A4U85_RS00800	SM01240	A4U85_RS00800
A4U85_RS00825	SM00937	A4U85_RS00825
A4U85_RS00830	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A4U85_RS00870	SM00344	helix_turn_helix ASNC type
A4U85_RS00885	SM00421	helix_turn_helix, Lux Regulon
A4U85_RS00885	SM00448	cheY-homologous receiver domain
A4U85_RS00895	SM00387	Histidine kinase-like ATPases
A4U85_RS00895	SM00388	His Kinase A (phosphoacceptor) domain
A4U85_RS00895	SM00448	cheY-homologous receiver domain
A4U85_RS00925	SM00267	diguanylate cyclase
A4U85_RS00940	SM00829	Enoylreductase
A4U85_RS01020	SM00530	Helix-turn-helix XRE-family like proteins 
A4U85_RS01030	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4U85_RS01110	SM00342	helix_turn_helix, arabinose operon control protein
A4U85_RS01185	SM00477	DNA/RNA non-specific endonuclease
A4U85_RS01185	SM00892	DNA/RNA non-specific endonuclease
A4U85_RS01205	SM00342	helix_turn_helix, arabinose operon control protein
A4U85_RS01225	SM00357	Cold shock protein domain
A4U85_RS01240	SM00530	Helix-turn-helix XRE-family like proteins 
A4U85_RS01250	SM00474	3'-5' exonuclease
A4U85_RS01295	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A4U85_RS01295	SM00387	Histidine kinase-like ATPases
A4U85_RS01295	SM00388	His Kinase A (phosphoacceptor) domain
A4U85_RS01300	SM00448	cheY-homologous receiver domain
A4U85_RS01300	SM00862	Transcriptional regulatory protein, C terminal
A4U85_RS01305	SM00316	Ribosomal protein S1-like RNA-binding domain
A4U85_RS01305	SM00732	Likely ribonuclease with RNase H fold.
A4U85_RS01310	SM00947	Carbonic anhydrase
A4U85_RS01325	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS01330	SM00671	Sel1-like repeats.
A4U85_RS01465	SM00842	Cell division protein FtsA
A4U85_RS01485	SM00965	Secretin and TonB N terminus short domain
A4U85_RS01565	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A4U85_RS01565	SM00954	Region found in RelA / SpoT proteins
A4U85_RS01570	SM01409	A4U85_RS01570
A4U85_RS01575	SM00072	Guanylate kinase homologues.
A4U85_RS01760	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
A4U85_RS01855	SM00116	Domain in cystathionine beta-synthase and other proteins.
A4U85_RS01895	SM00861	Transketolase, pyrimidine binding domain
A4U85_RS01905	SM00487	DEAD-like helicases superfamily
A4U85_RS01905	SM00490	helicase superfamily c-terminal domain
A4U85_RS01910	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS01955	SM00487	DEAD-like helicases superfamily
A4U85_RS01955	SM00490	helicase superfamily c-terminal domain
A4U85_RS01970	SM00563	Phosphate acyltransferases
A4U85_RS02020	SM01403	A4U85_RS02020
A4U85_RS02040	SM01382	A4U85_RS02040
A4U85_RS02040	SM01383	A4U85_RS02040
A4U85_RS02055	SM00322	K homology RNA-binding domain
A4U85_RS02075	SM01374	A4U85_RS02075
A4U85_RS02080	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
A4U85_RS02145	SM00363	S4 RNA-binding domain
A4U85_RS02145	SM01390	A4U85_RS02145
A4U85_RS02150	SM00662	RNA polymerases D
A4U85_RS02210	SM00316	Ribosomal protein S1-like RNA-binding domain
A4U85_RS02210	SM00955	A4U85_RS02210
A4U85_RS02260	SM00342	helix_turn_helix, arabinose operon control protein
A4U85_RS02310	SM00729	Elongator protein 3, MiaB family, Radical SAM
A4U85_RS02340	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
A4U85_RS02435	SM00878	Biotin carboxylase C-terminal domain
A4U85_RS02470	SM00650	Ribosomal RNA adenine dimethylases
A4U85_RS02500	SM00563	Phosphate acyltransferases
A4U85_RS02505	SM00155	Phospholipase D. Active site motifs.
A4U85_RS02520	SM00267	diguanylate cyclase
A4U85_RS02595	SM00450	Rhodanese Homology Domain
A4U85_RS02620	SM00481	DNA polymerase alpha chain like domain
A4U85_RS02650	SM01323	A4U85_RS02650
A4U85_RS02685	SM00387	Histidine kinase-like ATPases
A4U85_RS02685	SM00388	His Kinase A (phosphoacceptor) domain
A4U85_RS02810	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A4U85_RS02810	SM00387	Histidine kinase-like ATPases
A4U85_RS02810	SM00388	His Kinase A (phosphoacceptor) domain
A4U85_RS02815	SM00448	cheY-homologous receiver domain
A4U85_RS02815	SM00862	Transcriptional regulatory protein, C terminal
A4U85_RS02875	SM00342	helix_turn_helix, arabinose operon control protein
A4U85_RS02905	SM00849	Metallo-beta-lactamase superfamily
A4U85_RS02915	SM00957	SecA DEAD-like domain
A4U85_RS02915	SM00958	SecA preprotein cross-linking domain
A4U85_RS02965	SM00342	helix_turn_helix, arabinose operon control protein
A4U85_RS02980	SM00564	beta-propeller repeat
A4U85_RS03040	SM00838	Elongation factor G C-terminus
A4U85_RS03060	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
A4U85_RS03060	SM01232	A4U85_RS03060
A4U85_RS03085	SM00671	Sel1-like repeats.
A4U85_RS03140	SM00448	cheY-homologous receiver domain
A4U85_RS03145	SM00448	cheY-homologous receiver domain
A4U85_RS03150	SM00260	Two component signalling adaptor domain
A4U85_RS03155	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A4U85_RS03160	SM00073	Histidine Phosphotransfer domain
A4U85_RS03160	SM00260	Two component signalling adaptor domain
A4U85_RS03160	SM00387	Histidine kinase-like ATPases
A4U85_RS03160	SM00448	cheY-homologous receiver domain
A4U85_RS03160	SM01231	A4U85_RS03160
A4U85_RS03300	SM00845	GatB domain
A4U85_RS03335	SM00316	Ribosomal protein S1-like RNA-binding domain
A4U85_RS03365	SM00342	helix_turn_helix, arabinose operon control protein
A4U85_RS03385	SM00342	helix_turn_helix, arabinose operon control protein
A4U85_RS03390	SM00829	Enoylreductase
A4U85_RS03425	SM00244	prohibitin homologues
A4U85_RS03440	SM00563	Phosphate acyltransferases
A4U85_RS03460	SM00448	cheY-homologous receiver domain
A4U85_RS03460	SM00862	Transcriptional regulatory protein, C terminal
A4U85_RS03465	SM00387	Histidine kinase-like ATPases
A4U85_RS03465	SM00388	His Kinase A (phosphoacceptor) domain
A4U85_RS03515	SM00822	A4U85_RS03515
A4U85_RS03550	SM00014	Acid phosphatase homologues
A4U85_RS03655	SM00450	Rhodanese Homology Domain
A4U85_RS03695	SM00861	Transketolase, pyrimidine binding domain
A4U85_RS03715	SM00881	CoA binding domain
A4U85_RS03750	SM00854	Bacterial capsule synthesis protein PGA_cap
A4U85_RS03780	SM00851	MGS-like domain
A4U85_RS03780	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
A4U85_RS03785	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
A4U85_RS03805	SM01103	A4U85_RS03805
A4U85_RS03815	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS03890	SM00046	Diacylglycerol kinase catalytic domain (presumed)
A4U85_RS03905	SM00883	Chaperonin 10 Kd subunit
A4U85_RS03920	SM00849	Metallo-beta-lactamase superfamily
A4U85_RS04065	SM00978	A4U85_RS04065
A4U85_RS04070	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS04115	SM00893	Electron transfer flavoprotein domain
A4U85_RS04120	SM00893	Electron transfer flavoprotein domain
A4U85_RS04125	SM00434	DNA Topoisomerase IV
A4U85_RS04195	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS04200	SM00849	Metallo-beta-lactamase superfamily
A4U85_RS04315	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS04320	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A4U85_RS04325	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A4U85_RS04330	SM01211	A4U85_RS04330
A4U85_RS04400	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS04450	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A4U85_RS04460	SM00838	Elongation factor G C-terminus
A4U85_RS04475	SM00358	Double-stranded RNA binding motif
A4U85_RS04475	SM00535	Ribonuclease III family
A4U85_RS04550	SM00267	diguanylate cyclase
A4U85_RS04560	SM00487	DEAD-like helicases superfamily
A4U85_RS04560	SM00490	helicase superfamily c-terminal domain
A4U85_RS04575	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
A4U85_RS04595	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
A4U85_RS04695	SM01329	A4U85_RS04695
A4U85_RS04745	SM00880	A4U85_RS04745
A4U85_RS04745	SM01118	A4U85_RS04745
A4U85_RS04775	SM00487	DEAD-like helicases superfamily
A4U85_RS04775	SM00490	helicase superfamily c-terminal domain
A4U85_RS04830	SM00344	helix_turn_helix ASNC type
A4U85_RS04860	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS04905	SM00936	Penicillin-binding protein 5, C-terminal domain 
A4U85_RS04925	SM00257	Lysin motif
A4U85_RS04960	SM00052	Putative diguanylate phosphodiesterase
A4U85_RS04975	SM00841	Elongation factor P, C-terminal
A4U85_RS04975	SM01185	A4U85_RS04975
A4U85_RS05060	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS05100	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS05105	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS05160	SM01092	CO dehydrogenase flavoprotein C-terminal domain
A4U85_RS05165	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
A4U85_RS05175	SM00463	Small MutS-related domain
A4U85_RS05215	SM01230	A4U85_RS05215
A4U85_RS05270	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A4U85_RS05280	SM00919	Malic enzyme, NAD binding domain
A4U85_RS05280	SM01274	A4U85_RS05280
A4U85_RS05285	SM00052	Putative diguanylate phosphodiesterase
A4U85_RS05285	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
A4U85_RS05285	SM00091	PAS domain
A4U85_RS05285	SM00267	diguanylate cyclase
A4U85_RS05300	SM00996	S-adenosyl-L-homocysteine hydrolase
A4U85_RS05300	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
A4U85_RS05320	SM00729	Elongator protein 3, MiaB family, Radical SAM
A4U85_RS05365	SM00342	helix_turn_helix, arabinose operon control protein
A4U85_RS05415	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS05425	SM01040	BRO family, N-terminal domain
A4U85_RS05500	SM00530	Helix-turn-helix XRE-family like proteins 
A4U85_RS05525	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS05555	SM00990	A4U85_RS05555
A4U85_RS05675	SM00974	A4U85_RS05675
A4U85_RS05800	SM00479	A4U85_RS05800
A4U85_RS05835	SM00062	Bacterial periplasmic substrate-binding proteins
A4U85_RS05850	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS05870	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4U85_RS05895	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS05905	SM00448	cheY-homologous receiver domain
A4U85_RS05905	SM00862	Transcriptional regulatory protein, C terminal
A4U85_RS05910	SM00387	Histidine kinase-like ATPases
A4U85_RS05910	SM00388	His Kinase A (phosphoacceptor) domain
A4U85_RS05970	SM00830	Chorismate mutase type II
A4U85_RS06035	SM00357	Cold shock protein domain
A4U85_RS06040	SM00487	DEAD-like helicases superfamily
A4U85_RS06040	SM00490	helicase superfamily c-terminal domain
A4U85_RS06060	SM00855	Phosphoglycerate mutase family
A4U85_RS06140	SM00220	Serine/Threonine protein kinases, catalytic domain
A4U85_RS06215	SM01034	Sensors of blue-light using FAD
A4U85_RS06230	SM00342	helix_turn_helix, arabinose operon control protein
A4U85_RS06250	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4U85_RS06250	SM00895	A4U85_RS06250
A4U85_RS06270	SM00972	Spore Coat Protein U domain
A4U85_RS06295	SM00972	Spore Coat Protein U domain
A4U85_RS06355	SM00095	Transthyretin
A4U85_RS06365	SM00448	cheY-homologous receiver domain
A4U85_RS06365	SM00862	Transcriptional regulatory protein, C terminal
A4U85_RS06370	SM00387	Histidine kinase-like ATPases
A4U85_RS06370	SM00388	His Kinase A (phosphoacceptor) domain
A4U85_RS06410	SM00388	His Kinase A (phosphoacceptor) domain
A4U85_RS06415	SM00448	cheY-homologous receiver domain
A4U85_RS06415	SM00862	Transcriptional regulatory protein, C terminal
A4U85_RS06475	SM00849	Metallo-beta-lactamase superfamily
A4U85_RS06485	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS06485	SM00930	A4U85_RS06485
A4U85_RS06495	SM01209	A4U85_RS06495
A4U85_RS06495	SM01210	A4U85_RS06495
A4U85_RS06500	SM00798	AICARFT/IMPCHase bienzyme
A4U85_RS06500	SM00851	MGS-like domain
A4U85_RS06525	SM01228	A4U85_RS06525
A4U85_RS06545	SM00460	Transglutaminase/protease-like homologues
A4U85_RS06555	SM01005	Alanine racemase, C-terminal domain
A4U85_RS06675	SM00937	A4U85_RS06675
A4U85_RS06685	SM00342	helix_turn_helix, arabinose operon control protein
A4U85_RS06690	SM00822	A4U85_RS06690
A4U85_RS06705	SM00903	Flavin reductase like domain
A4U85_RS06720	SM00905	Dihydroneopterin aldolase
A4U85_RS06745	SM00387	Histidine kinase-like ATPases
A4U85_RS06745	SM00388	His Kinase A (phosphoacceptor) domain
A4U85_RS06750	SM00448	cheY-homologous receiver domain
A4U85_RS06750	SM00862	Transcriptional regulatory protein, C terminal
A4U85_RS06755	SM01230	A4U85_RS06755
A4U85_RS06840	SM00363	S4 RNA-binding domain
A4U85_RS06865	SM00853	MutL C terminal dimerisation domain
A4U85_RS06865	SM01340	A4U85_RS06865
A4U85_RS06935	SM00862	Transcriptional regulatory protein, C terminal
A4U85_RS06950	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS06980	SM00972	Spore Coat Protein U domain
A4U85_RS06995	SM00972	Spore Coat Protein U domain
A4U85_RS07015	SM00830	Chorismate mutase type II
A4U85_RS07020	SM00344	helix_turn_helix ASNC type
A4U85_RS07090	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS07110	SM00831	Cation transporter/ATPase, N-terminus
A4U85_RS07125	SM00344	helix_turn_helix ASNC type
A4U85_RS07155	SM00822	A4U85_RS07155
A4U85_RS07180	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS07205	SM00226	Low molecular weight phosphatase family
A4U85_RS07240	SM01236	A4U85_RS07240
A4U85_RS07255	SM00878	Biotin carboxylase C-terminal domain
A4U85_RS07280	SM00448	cheY-homologous receiver domain
A4U85_RS07280	SM01012	A4U85_RS07280
A4U85_RS07300	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
A4U85_RS07310	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
A4U85_RS07320	SM00729	Elongator protein 3, MiaB family, Radical SAM
A4U85_RS07335	SM00852	Probable molybdopterin binding domain
A4U85_RS07340	SM00852	Probable molybdopterin binding domain
A4U85_RS07350	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4U85_RS07440	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS07440	SM00448	cheY-homologous receiver domain
A4U85_RS07445	SM00091	PAS domain
A4U85_RS07445	SM00387	Histidine kinase-like ATPases
A4U85_RS07445	SM00388	His Kinase A (phosphoacceptor) domain
A4U85_RS07450	SM00729	Elongator protein 3, MiaB family, Radical SAM
A4U85_RS07480	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A4U85_RS07490	SM00935	Outer membrane protein (OmpH-like)
A4U85_RS07525	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS07530	SM00363	S4 RNA-binding domain
A4U85_RS07560	SM00344	helix_turn_helix ASNC type
A4U85_RS07605	SM00052	Putative diguanylate phosphodiesterase
A4U85_RS07605	SM00091	PAS domain
A4U85_RS07605	SM00267	diguanylate cyclase
A4U85_RS07615	SM00347	helix_turn_helix multiple antibiotic resistance protein
A4U85_RS07690	SM00116	Domain in cystathionine beta-synthase and other proteins.
A4U85_RS07715	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS07715	SM00962	SRP54-type protein, GTPase domain
A4U85_RS07715	SM00963	SRP54-type protein, helical bundle domain
A4U85_RS07775	SM01264	A4U85_RS07775
A4U85_RS07815	SM00859	Semialdehyde dehydrogenase, NAD binding domain
A4U85_RS07830	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS07830	SM01086	C-terminal, D2-small domain, of ClpB protein
A4U85_RS07895	SM01192	A4U85_RS07895
A4U85_RS07895	SM01193	A4U85_RS07895
A4U85_RS07915	SM00882	Coenzyme A transferase
A4U85_RS07920	SM00882	Coenzyme A transferase
A4U85_RS07930	SM00998	Adenylosuccinate lyase C-terminus
A4U85_RS07965	SM00710	Parallel beta-helix repeats
A4U85_RS07975	SM00564	beta-propeller repeat
A4U85_RS07995	SM00849	Metallo-beta-lactamase superfamily
A4U85_RS08000	SM00346	helix_turn_helix isocitrate lyase regulation
A4U85_RS08020	SM00855	Phosphoglycerate mutase family
A4U85_RS08040	SM00347	helix_turn_helix multiple antibiotic resistance protein
A4U85_RS08085	SM00903	Flavin reductase like domain
A4U85_RS08090	SM00342	helix_turn_helix, arabinose operon control protein
A4U85_RS08125	SM00882	Coenzyme A transferase
A4U85_RS08130	SM00882	Coenzyme A transferase
A4U85_RS08145	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
A4U85_RS08160	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4U85_RS08160	SM00895	A4U85_RS08160
A4U85_RS08210	SM00422	helix_turn_helix, mercury resistance
A4U85_RS08255	SM00822	A4U85_RS08255
A4U85_RS08300	SM00912	haemagglutination activity domain
A4U85_RS08330	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4U85_RS08330	SM00866	A4U85_RS08330
A4U85_RS08410	SM00342	helix_turn_helix, arabinose operon control protein
A4U85_RS08425	SM00829	Enoylreductase
A4U85_RS08440	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS08450	SM00342	helix_turn_helix, arabinose operon control protein
A4U85_RS08460	SM01400	A4U85_RS08460
A4U85_RS08590	SM00530	Helix-turn-helix XRE-family like proteins 
A4U85_RS08605	SM00487	DEAD-like helicases superfamily
A4U85_RS08635	SM00822	A4U85_RS08635
A4U85_RS08640	SM00822	A4U85_RS08640
A4U85_RS08650	SM00342	helix_turn_helix, arabinose operon control protein
A4U85_RS08660	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A4U85_RS08660	SM00387	Histidine kinase-like ATPases
A4U85_RS08660	SM00388	His Kinase A (phosphoacceptor) domain
A4U85_RS08665	SM00448	cheY-homologous receiver domain
A4U85_RS08665	SM00862	Transcriptional regulatory protein, C terminal
A4U85_RS08715	SM00829	Enoylreductase
A4U85_RS08740	SM00155	Phospholipase D. Active site motifs.
A4U85_RS08760	SM00729	Elongator protein 3, MiaB family, Radical SAM
A4U85_RS08810	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS08845	SM00342	helix_turn_helix, arabinose operon control protein
A4U85_RS08855	SM00903	Flavin reductase like domain
A4U85_RS08880	SM00342	helix_turn_helix, arabinose operon control protein
A4U85_RS08925	SM00882	Coenzyme A transferase
A4U85_RS08930	SM00882	Coenzyme A transferase
A4U85_RS08985	SM00567	E-Z type HEAT repeats
A4U85_RS08990	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS09015	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4U85_RS09015	SM00866	A4U85_RS09015
A4U85_RS09035	SM00342	helix_turn_helix, arabinose operon control protein
A4U85_RS09060	SM00849	Metallo-beta-lactamase superfamily
A4U85_RS09065	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS09075	SM00829	Enoylreductase
A4U85_RS09095	SM00861	Transketolase, pyrimidine binding domain
A4U85_RS09105	SM00729	Elongator protein 3, MiaB family, Radical SAM
A4U85_RS09120	SM00267	diguanylate cyclase
A4U85_RS09135	SM00474	3'-5' exonuclease
A4U85_RS09140	SM00493	A4U85_RS09140
A4U85_RS09190	SM01324	A4U85_RS09190
A4U85_RS09230	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS09290	SM00855	Phosphoglycerate mutase family
A4U85_RS09315	SM01006	Siderophore biosynthesis protein domain
A4U85_RS09405	SM00342	helix_turn_helix, arabinose operon control protein
A4U85_RS09415	SM00411	bacterial (prokaryotic) histone like domain
A4U85_RS09450	SM00271	DnaJ molecular chaperone homology domain
A4U85_RS09465	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
A4U85_RS09475	SM00487	DEAD-like helicases superfamily
A4U85_RS09475	SM00490	helicase superfamily c-terminal domain
A4U85_RS09475	SM00982	A4U85_RS09475
A4U85_RS09475	SM01058	CarD-like/TRCF domain
A4U85_RS09530	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS09600	SM00342	helix_turn_helix, arabinose operon control protein
A4U85_RS09615	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
A4U85_RS09625	SM00411	bacterial (prokaryotic) histone like domain
A4U85_RS09630	SM00316	Ribosomal protein S1-like RNA-binding domain
A4U85_RS09655	SM00986	Uracil DNA glycosylase superfamily
A4U85_RS09655	SM00987	UreE urease accessory protein, C-terminal domain 
A4U85_RS09715	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS09730	SM00470	ParB-like nuclease domain
A4U85_RS09790	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
A4U85_RS09800	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A4U85_RS09820	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS09830	SM00342	helix_turn_helix, arabinose operon control protein
A4U85_RS09850	SM00344	helix_turn_helix ASNC type
A4U85_RS09885	SM00867	YceI-like domain 
A4U85_RS09895	SM00861	Transketolase, pyrimidine binding domain
A4U85_RS09930	SM00530	Helix-turn-helix XRE-family like proteins 
A4U85_RS09950	SM00729	Elongator protein 3, MiaB family, Radical SAM
A4U85_RS09950	SM00876	Biotin and Thiamin Synthesis associated domain
A4U85_RS10035	SM01236	A4U85_RS10035
A4U85_RS10050	SM00974	A4U85_RS10050
A4U85_RS10060	SM00487	DEAD-like helicases superfamily
A4U85_RS10100	SM00563	Phosphate acyltransferases
A4U85_RS10110	SM00344	helix_turn_helix ASNC type
A4U85_RS10120	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS10135	SM00062	Bacterial periplasmic substrate-binding proteins
A4U85_RS10170	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS10170	SM00930	A4U85_RS10170
A4U85_RS10190	SM00100	Cyclic nucleotide-monophosphate binding domain
A4U85_RS10190	SM00419	helix_turn_helix, cAMP Regulatory protein
A4U85_RS10225	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A4U85_RS10240	SM00342	helix_turn_helix, arabinose operon control protein
A4U85_RS10265	SM00870	A4U85_RS10265
A4U85_RS10270	SM00481	DNA polymerase alpha chain like domain
A4U85_RS10320	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A4U85_RS10350	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4U85_RS10350	SM00895	A4U85_RS10350
A4U85_RS10375	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS10380	SM00062	Bacterial periplasmic substrate-binding proteins
A4U85_RS10430	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4U85_RS10450	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
A4U85_RS10510	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4U85_RS10545	SM00822	A4U85_RS10545
A4U85_RS10550	SM00450	Rhodanese Homology Domain
A4U85_RS10580	SM00062	Bacterial periplasmic substrate-binding proteins
A4U85_RS10585	SM00062	Bacterial periplasmic substrate-binding proteins
A4U85_RS10590	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS10610	SM00421	helix_turn_helix, Lux Regulon
A4U85_RS10610	SM00448	cheY-homologous receiver domain
A4U85_RS10615	SM00387	Histidine kinase-like ATPases
A4U85_RS10615	SM00388	His Kinase A (phosphoacceptor) domain
A4U85_RS10615	SM00448	cheY-homologous receiver domain
A4U85_RS10625	SM00344	helix_turn_helix ASNC type
A4U85_RS10645	SM00384	DNA binding domain with preference for A/T rich regions
A4U85_RS10660	SM01060	A4U85_RS10660
A4U85_RS10665	SM01236	A4U85_RS10665
A4U85_RS10745	SM00878	Biotin carboxylase C-terminal domain
A4U85_RS10790	SM00882	Coenzyme A transferase
A4U85_RS10795	SM00882	Coenzyme A transferase
A4U85_RS10830	SM00346	helix_turn_helix isocitrate lyase regulation
A4U85_RS10850	SM00346	helix_turn_helix isocitrate lyase regulation
A4U85_RS10890	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS10900	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4U85_RS10900	SM00866	A4U85_RS10900
A4U85_RS10910	SM00346	helix_turn_helix isocitrate lyase regulation
A4U85_RS10965	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4U85_RS10965	SM00895	A4U85_RS10965
A4U85_RS10980	SM01060	A4U85_RS10980
A4U85_RS11010	SM00342	helix_turn_helix, arabinose operon control protein
A4U85_RS11030	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS11040	SM00671	Sel1-like repeats.
A4U85_RS11145	SM00342	helix_turn_helix, arabinose operon control protein
A4U85_RS11170	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4U85_RS11170	SM00895	A4U85_RS11170
A4U85_RS11180	SM01130	A4U85_RS11180
A4U85_RS11230	SM00248	ankyrin repeats
A4U85_RS11265	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS11265	SM01086	C-terminal, D2-small domain, of ClpB protein
A4U85_RS11345	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS11385	SM00796	Allophanate hydrolase subunit 1
A4U85_RS11385	SM00797	Allophanate hydrolase subunit 2
A4U85_RS11385	SM00878	Biotin carboxylase C-terminal domain
A4U85_RS11400	SM00829	Enoylreductase
A4U85_RS11425	SM00912	haemagglutination activity domain
A4U85_RS11440	SM00878	Biotin carboxylase C-terminal domain
A4U85_RS11445	SM00796	Allophanate hydrolase subunit 1
A4U85_RS11445	SM00797	Allophanate hydrolase subunit 2
A4U85_RS11510	SM00422	helix_turn_helix, mercury resistance
A4U85_RS11540	SM00052	Putative diguanylate phosphodiesterase
A4U85_RS11550	SM00344	helix_turn_helix ASNC type
A4U85_RS11555	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
A4U85_RS11555	SM00534	ATPase domain of DNA mismatch repair MUTS family
A4U85_RS11600	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS11650	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS11670	SM00116	Domain in cystathionine beta-synthase and other proteins.
A4U85_RS11675	SM00840	A4U85_RS11675
A4U85_RS11810	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS11855	SM00530	Helix-turn-helix XRE-family like proteins 
A4U85_RS12005	SM00357	Cold shock protein domain
A4U85_RS12030	SM00530	Helix-turn-helix XRE-family like proteins 
A4U85_RS12085	SM00422	helix_turn_helix, mercury resistance
A4U85_RS12145	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS12145	SM00487	DEAD-like helicases superfamily
A4U85_RS12145	SM00490	helicase superfamily c-terminal domain
A4U85_RS12145	SM00847	Helicase associated domain (HA2)  Add an annotation
A4U85_RS12195	SM00736	Dystroglycan-type cadherin-like domains.
A4U85_RS12240	SM00981	A4U85_RS12240
A4U85_RS12255	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS12255	SM01086	C-terminal, D2-small domain, of ClpB protein
A4U85_RS12275	SM00100	Cyclic nucleotide-monophosphate binding domain
A4U85_RS12275	SM00419	helix_turn_helix, cAMP Regulatory protein
A4U85_RS12295	SM00788	Adenylosuccinate synthetase
A4U85_RS12305	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
A4U85_RS12310	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
A4U85_RS12355	SM00060	Fibronectin type 3 domain
A4U85_RS12565	SM00530	Helix-turn-helix XRE-family like proteins 
A4U85_RS12705	SM00342	helix_turn_helix, arabinose operon control protein
A4U85_RS12750	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4U85_RS12750	SM00895	A4U85_RS12750
A4U85_RS12755	SM00347	helix_turn_helix multiple antibiotic resistance protein
A4U85_RS12805	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4U85_RS12805	SM00895	A4U85_RS12805
A4U85_RS12815	SM01130	A4U85_RS12815
A4U85_RS12820	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
A4U85_RS12830	SM00858	A4U85_RS12830
A4U85_RS12840	SM00342	helix_turn_helix, arabinose operon control protein
A4U85_RS12885	SM00344	helix_turn_helix ASNC type
A4U85_RS12900	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4U85_RS12995	SM00487	DEAD-like helicases superfamily
A4U85_RS13035	SM00422	helix_turn_helix, mercury resistance
A4U85_RS13055	SM00422	helix_turn_helix, mercury resistance
A4U85_RS13075	SM00422	helix_turn_helix, mercury resistance
A4U85_RS13175	SM00267	diguanylate cyclase
A4U85_RS13185	SM00479	A4U85_RS13185
A4U85_RS13205	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS13225	SM00257	Lysin motif
A4U85_RS13230	SM00479	A4U85_RS13230
A4U85_RS13285	SM00422	helix_turn_helix, mercury resistance
A4U85_RS13305	SM01011	Aminopeptidase P, N-terminal domain
A4U85_RS13400	SM00530	Helix-turn-helix XRE-family like proteins 
A4U85_RS13435	SM00287	Bacterial SH3 domain homologues
A4U85_RS13620	SM00530	Helix-turn-helix XRE-family like proteins 
A4U85_RS13720	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS13720	SM00464	Found in ATP-dependent protease La (LON)
A4U85_RS13740	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
A4U85_RS13750	SM00478	endonuclease III
A4U85_RS13795	SM00988	UreE urease accessory protein, N-terminal domain
A4U85_RS13840	SM01091	Transporter associated domain
A4U85_RS13940	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS13950	SM00947	Carbonic anhydrase
A4U85_RS14005	SM01018	B12 binding domain
A4U85_RS14010	SM00861	Transketolase, pyrimidine binding domain
A4U85_RS14025	SM00822	A4U85_RS14025
A4U85_RS14055	SM00342	helix_turn_helix, arabinose operon control protein
A4U85_RS14125	SM00822	A4U85_RS14125
A4U85_RS14145	SM00346	helix_turn_helix isocitrate lyase regulation
A4U85_RS14185	SM01322	A4U85_RS14185
A4U85_RS14300	SM01130	A4U85_RS14300
A4U85_RS14460	SM01040	BRO family, N-terminal domain
A4U85_RS14510	SM01004	Delta-aminolevulinic acid dehydratase
A4U85_RS14555	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS14630	SM00563	Phosphate acyltransferases
A4U85_RS14665	SM00843	A4U85_RS14665
A4U85_RS14705	SM00838	Elongation factor G C-terminus
A4U85_RS14705	SM00889	Elongation factor G, domain IV
A4U85_RS14725	SM00825	Beta-ketoacyl synthase
A4U85_RS14785	SM01329	A4U85_RS14785
A4U85_RS14835	SM00363	S4 RNA-binding domain
A4U85_RS14845	SM00400	zinc finger
A4U85_RS14845	SM00493	A4U85_RS14845
A4U85_RS14855	SM00028	Tetratricopeptide repeats
A4U85_RS14890	SM01400	A4U85_RS14890
A4U85_RS14935	SM00257	Lysin motif
A4U85_RS14945	SM00822	A4U85_RS14945
A4U85_RS14950	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
A4U85_RS14985	SM00363	S4 RNA-binding domain
A4U85_RS15035	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A4U85_RS15035	SM00292	breast cancer carboxy-terminal domain
A4U85_RS15035	SM00532	Ligase N family
A4U85_RS15040	SM00771	ZipA, C-terminal domain (FtsZ-binding)
A4U85_RS15050	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4U85_RS15070	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS15070	SM00962	SRP54-type protein, GTPase domain
A4U85_RS15070	SM00963	SRP54-type protein, helical bundle domain
A4U85_RS15210	SM00357	Cold shock protein domain
A4U85_RS15255	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
A4U85_RS15255	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
A4U85_RS15260	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
A4U85_RS15285	SM00267	diguanylate cyclase
A4U85_RS15295	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A4U85_RS15295	SM00387	Histidine kinase-like ATPases
A4U85_RS15295	SM00388	His Kinase A (phosphoacceptor) domain
A4U85_RS15300	SM00448	cheY-homologous receiver domain
A4U85_RS15300	SM00862	Transcriptional regulatory protein, C terminal
A4U85_RS15355	SM00671	Sel1-like repeats.
A4U85_RS15380	SM00903	Flavin reductase like domain
A4U85_RS15690	SM00331	Sigma factor PP2C-like phosphatases
A4U85_RS15710	SM00347	helix_turn_helix multiple antibiotic resistance protein
A4U85_RS15720	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS15740	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
A4U85_RS15740	SM00474	3'-5' exonuclease
A4U85_RS15740	SM00475	5'-3' exonuclease
A4U85_RS15740	SM00482	DNA polymerase A domain
A4U85_RS15755	SM00977	TilS substrate C-terminal domain
A4U85_RS15775	SM00357	Cold shock protein domain
A4U85_RS15775	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS15775	SM00959	Rho termination factor, N-terminal domain
A4U85_RS15785	SM00411	bacterial (prokaryotic) histone like domain
A4U85_RS15790	SM00873	B3/4 domain
A4U85_RS15790	SM00874	tRNA synthetase B5 domain
A4U85_RS15790	SM00896	Ferredoxin-fold anticodon binding domain
A4U85_RS15855	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
A4U85_RS15900	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A4U85_RS15915	SM00954	Region found in RelA / SpoT proteins
A4U85_RS15935	SM00073	Histidine Phosphotransfer domain
A4U85_RS15935	SM00387	Histidine kinase-like ATPases
A4U85_RS15935	SM00388	His Kinase A (phosphoacceptor) domain
A4U85_RS15935	SM00448	cheY-homologous receiver domain
A4U85_RS15975	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
A4U85_RS15975	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
A4U85_RS16045	SM01236	A4U85_RS16045
A4U85_RS16065	SM00052	Putative diguanylate phosphodiesterase
A4U85_RS16065	SM00267	diguanylate cyclase
A4U85_RS16115	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS16135	SM00479	A4U85_RS16135
A4U85_RS16145	SM00450	Rhodanese Homology Domain
A4U85_RS16170	SM00564	beta-propeller repeat
A4U85_RS16195	SM00028	Tetratricopeptide repeats
A4U85_RS16205	SM00562	A4U85_RS16205
A4U85_RS16215	SM00014	Acid phosphatase homologues
A4U85_RS16225	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A4U85_RS16225	SM00245	tail specific protease
A4U85_RS16300	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS16300	SM00994	ClpX C4-type zinc finger
A4U85_RS16300	SM01086	C-terminal, D2-small domain, of ClpB protein
A4U85_RS16320	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
A4U85_RS16325	SM00917	LeuA allosteric (dimerisation) domain
A4U85_RS16340	SM00671	Sel1-like repeats.
A4U85_RS16525	SM00360	RNA recognition motif
A4U85_RS16545	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
A4U85_RS16545	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
A4U85_RS16545	SM00493	A4U85_RS16545
A4U85_RS16560	SM00829	Enoylreductase
A4U85_RS16570	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS16600	SM00859	Semialdehyde dehydrogenase, NAD binding domain
A4U85_RS16615	SM00870	A4U85_RS16615
A4U85_RS16625	SM00342	helix_turn_helix, arabinose operon control protein
A4U85_RS16630	SM00316	Ribosomal protein S1-like RNA-binding domain
A4U85_RS16645	SM01329	A4U85_RS16645
A4U85_RS16695	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A4U85_RS16735	SM00363	S4 RNA-binding domain
A4U85_RS16745	SM00316	Ribosomal protein S1-like RNA-binding domain
A4U85_RS16775	SM00729	Elongator protein 3, MiaB family, Radical SAM
A4U85_RS16845	SM00849	Metallo-beta-lactamase superfamily
A4U85_RS16880	SM00116	Domain in cystathionine beta-synthase and other proteins.
A4U85_RS16880	SM01091	Transporter associated domain
A4U85_RS16910	SM00487	DEAD-like helicases superfamily
A4U85_RS16910	SM00490	helicase superfamily c-terminal domain
A4U85_RS16930	SM00271	DnaJ molecular chaperone homology domain
A4U85_RS16945	SM00316	Ribosomal protein S1-like RNA-binding domain
A4U85_RS16945	SM00322	K homology RNA-binding domain
A4U85_RS16950	SM01387	A4U85_RS16950
A4U85_RS16960	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS17065	SM00316	Ribosomal protein S1-like RNA-binding domain
A4U85_RS17120	SM00967	RNA 2'-O ribose methyltransferase substrate binding
A4U85_RS17130	SM00028	Tetratricopeptide repeats
A4U85_RS17145	SM00732	Likely ribonuclease with RNase H fold.
A4U85_RS17165	SM00346	helix_turn_helix isocitrate lyase regulation
A4U85_RS17175	SM00342	helix_turn_helix, arabinose operon control protein
A4U85_RS17190	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A4U85_RS17190	SM00465	GIY-YIG type nucleases (URI domain)
A4U85_RS17230	SM00422	helix_turn_helix, mercury resistance
A4U85_RS17255	SM00387	Histidine kinase-like ATPases
A4U85_RS17295	SM00663	RNA polymerase I subunit A N-terminus
A4U85_RS17320	SM00649	Ribosomal protein L11/L12
A4U85_RS17325	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
A4U85_RS17325	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
A4U85_RS17375	SM00240	Forkhead associated domain
A4U85_RS17385	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A4U85_RS17395	SM00528	Domain in histone-like proteins of HNS family
A4U85_RS17425	SM00448	cheY-homologous receiver domain
A4U85_RS17425	SM00850	LytTr DNA-binding domain
A4U85_RS17515	SM00899	A4U85_RS17515
A4U85_RS17545	SM00421	helix_turn_helix, Lux Regulon
A4U85_RS17545	SM00448	cheY-homologous receiver domain
A4U85_RS17550	SM00387	Histidine kinase-like ATPases
A4U85_RS17550	SM00388	His Kinase A (phosphoacceptor) domain
A4U85_RS17555	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS17555	SM00448	cheY-homologous receiver domain
A4U85_RS17560	SM00245	tail specific protease
A4U85_RS17625	SM00938	Nitrogen regulatory protein P-II
A4U85_RS17635	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS17640	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4U85_RS17645	SM01007	Class II Aldolase and Adducin N-terminal domain
A4U85_RS17650	SM01130	A4U85_RS17650
A4U85_RS17685	SM00434	DNA Topoisomerase IV
A4U85_RS17705	SM01091	Transporter associated domain
A4U85_RS17720	SM00641	Glycosyl hydrolases family 25
A4U85_RS17740	SM00729	Elongator protein 3, MiaB family, Radical SAM
A4U85_RS17750	SM00422	helix_turn_helix, mercury resistance
A4U85_RS17865	SM00342	helix_turn_helix, arabinose operon control protein
A4U85_RS17885	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS17935	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS17955	SM00919	Malic enzyme, NAD binding domain
A4U85_RS17955	SM01274	A4U85_RS17955
A4U85_RS17960	SM00836	DALR anticodon binding domain
A4U85_RS17960	SM01016	Arginyl tRNA synthetase N terminal dom
A4U85_RS18075	SM00823	Phosphopantetheine attachment site
A4U85_RS18075	SM00824	Thioesterase
A4U85_RS18080	SM00823	Phosphopantetheine attachment site
A4U85_RS18080	SM01294	A4U85_RS18080
A4U85_RS18095	SM00421	helix_turn_helix, Lux Regulon
A4U85_RS18165	SM01005	Alanine racemase, C-terminal domain
A4U85_RS18175	SM00344	helix_turn_helix ASNC type
A4U85_RS18235	SM00671	Sel1-like repeats.
A4U85_RS18240	SM00825	Beta-ketoacyl synthase
A4U85_RS18305	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4U85_RS18305	SM00895	A4U85_RS18305
A4U85_RS18325	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A4U85_RS18325	SM00895	A4U85_RS18325
A4U85_RS18350	SM00984	UDP binding domain
A4U85_RS18415	SM00984	UDP binding domain
A4U85_RS18425	SM00226	Low molecular weight phosphatase family
A4U85_RS18450	SM00644	A4U85_RS18450
A4U85_RS18555	SM00857	Resolvase, N terminal domain
A4U85_RS18605	SM00857	Resolvase, N terminal domain
A4U85_RS18610	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A4U85_RS18620	SM00226	Low molecular weight phosphatase family
A4U85_RS18775	SM00062	Bacterial periplasmic substrate-binding proteins
A4U85_RS18780	SM00062	Bacterial periplasmic substrate-binding proteins
A4U85_RS18795	SM00382	ATPases associated with a variety of cellular activities
A4U85_RS18815	SM00904	Riboflavin kinase
A4U85_RS18840	SM00248	ankyrin repeats
A4U85_RS18890	SM00849	Metallo-beta-lactamase superfamily
A4U85_RS18910	SM00235	Zinc-dependent metalloprotease
A4U85_RS18915	SM00235	Zinc-dependent metalloprotease
A4U85_RS18935	SM01001	AIR carboxylase
A4U85_RS18960	SM00014	Acid phosphatase homologues
A4U85_RS19025	SM01234	A4U85_RS19025
A4U85_RS19050	SM00347	helix_turn_helix multiple antibiotic resistance protein
A4U85_RS19090	SM00530	Helix-turn-helix XRE-family like proteins 
A4U85_RS19100	SM00671	Sel1-like repeats.
