locus-tag class description LRO55_RS00005 PF00308 Bacterial dnaA protein LRO55_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix LRO55_RS00005 PF11638 DnaA N-terminal domain LRO55_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain LRO55_RS00010 PF02767 DNA polymerase III beta subunit, central domain LRO55_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain LRO55_RS00015 PF02463 RecF/RecN/SMC N terminal domain LRO55_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRO55_RS00020 PF18053 DNA gyrase B subunit insert domain LRO55_RS00020 PF01751 Toprim domain LRO55_RS00020 PF00204 DNA gyrase B LRO55_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus LRO55_RS00035 PF00005 ABC transporter LRO55_RS00035 PF12848 ABC transporter LRO55_RS00055 PF01521 Iron-sulphur cluster biosynthesis LRO55_RS00060 PF00561 alpha/beta hydrolase fold LRO55_RS00065 PF03702 Anhydro-N-acetylmuramic acid kinase LRO55_RS00070 PF00579 tRNA synthetases class I (W and Y) LRO55_RS00120 PF00209 Sodium:neurotransmitter symporter family LRO55_RS00130 PF01189 16S rRNA methyltransferase RsmB/F LRO55_RS00130 PF01029 NusB family LRO55_RS00135 PF00551 Formyl transferase LRO55_RS00135 PF02911 Formyl transferase, C-terminal domain LRO55_RS00140 PF00920 Dehydratase family LRO55_RS00160 PF00860 Permease family LRO55_RS00165 PF00311 Phosphoenolpyruvate carboxylase LRO55_RS00170 PF08361 MAATS-type transcriptional repressor, C-terminal region LRO55_RS00170 PF00440 Bacterial regulatory proteins, tetR family LRO55_RS00175 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LRO55_RS00180 PF00873 AcrB/AcrD/AcrF family LRO55_RS00190 PF01556 DnaJ C terminal domain LRO55_RS00190 PF00226 DnaJ domain LRO55_RS00190 PF00684 DnaJ central domain LRO55_RS00200 PF01113 Dihydrodipicolinate reductase, N-terminus LRO55_RS00200 PF05173 Dihydrodipicolinate reductase, C-terminus LRO55_RS00210 PF07690 Major Facilitator Superfamily LRO55_RS00215 PF00248 Aldo/keto reductase family LRO55_RS00220 PF03466 LysR substrate binding domain LRO55_RS00220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS00235 PF00155 Aminotransferase class I and II LRO55_RS00235 PF00392 Bacterial regulatory proteins, gntR family LRO55_RS00240 PF00107 Zinc-binding dehydrogenase LRO55_RS00240 PF08240 Alcohol dehydrogenase GroES-like domain LRO55_RS00245 PF03352 Methyladenine glycosylase LRO55_RS00260 PF10576 Iron-sulfur binding domain of endonuclease III LRO55_RS00260 PF00633 Helix-hairpin-helix motif LRO55_RS00260 PF00730 HhH-GPD superfamily base excision DNA repair protein LRO55_RS00260 PF14815 NUDIX domain LRO55_RS00275 PF07043 Protein of unknown function (DUF1328) LRO55_RS00280 PF03692 Putative zinc- or iron-chelating domain LRO55_RS00285 PF07995 Glucose / Sorbosone dehydrogenase LRO55_RS00290 PF12002 MgsA AAA+ ATPase C terminal LRO55_RS00290 PF16193 AAA C-terminal domain LRO55_RS00290 PF00004 ATPase family associated with various cellular activities (AAA) LRO55_RS00295 PF01226 Formate/nitrite transporter LRO55_RS00305 PF01259 SAICAR synthetase LRO55_RS00315 PF00701 Dihydrodipicolinate synthetase family LRO55_RS00320 PF00857 Isochorismatase family LRO55_RS00325 PF01758 Sodium Bile acid symporter family LRO55_RS00330 PF01554 MatE LRO55_RS00335 PF04463 Protein of unknown function (DUF523) LRO55_RS00340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LRO55_RS00350 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LRO55_RS00355 PF02798 Glutathione S-transferase, N-terminal domain LRO55_RS00355 PF14497 Glutathione S-transferase, C-terminal domain LRO55_RS00365 PF00324 Amino acid permease LRO55_RS00375 PF02492 CobW/HypB/UreG, nucleotide-binding domain LRO55_RS00375 PF07683 Cobalamin synthesis protein cobW C-terminal domain LRO55_RS00385 PF00392 Bacterial regulatory proteins, gntR family LRO55_RS00385 PF07702 UTRA domain LRO55_RS00390 PF05962 HutD LRO55_RS00395 PF01175 Urocanase Rossmann-like domain LRO55_RS00395 PF17391 Urocanase N-terminal domain LRO55_RS00395 PF17392 Urocanase C-terminal domain LRO55_RS00400 PF00221 Aromatic amino acid lyase LRO55_RS00405 PF00324 Amino acid permease LRO55_RS00410 PF01979 Amidohydrolase family LRO55_RS00415 PF00491 Arginase family LRO55_RS00425 PF13419 Haloacid dehalogenase-like hydrolase LRO55_RS00430 PF01177 Asp/Glu/Hydantoin racemase LRO55_RS00435 PF01810 LysE type translocator LRO55_RS00445 PF01380 SIS domain LRO55_RS00450 PF12804 MobA-like NTP transferase domain LRO55_RS00450 PF14602 Hexapeptide repeat of succinyl-transferase LRO55_RS00450 PF00132 Bacterial transferase hexapeptide (six repeats) LRO55_RS00455 PF04608 Phosphatidylglycerophosphatase A LRO55_RS00460 PF02769 AIR synthase related protein, C-terminal domain LRO55_RS00460 PF00586 AIR synthase related protein, N-terminal domain LRO55_RS00465 PF01029 NusB family LRO55_RS00470 PF00885 6,7-dimethyl-8-ribityllumazine synthase LRO55_RS00475 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LRO55_RS00475 PF00925 GTP cyclohydrolase II LRO55_RS00500 PF02580 D-Tyr-tRNA(Tyr) deacylase LRO55_RS00505 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LRO55_RS00505 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LRO55_RS00510 PF00581 Rhodanese-like domain LRO55_RS00515 PF02666 Phosphatidylserine decarboxylase LRO55_RS00525 PF12727 PBP superfamily domain LRO55_RS00525 PF12728 Helix-turn-helix domain LRO55_RS00540 PF00989 PAS fold LRO55_RS00540 PF00512 His Kinase A (phospho-acceptor) domain LRO55_RS00540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRO55_RS00540 PF11808 Phosphate regulon sensor protein PhoR LRO55_RS00545 PF00486 Transcriptional regulatory protein, C terminal LRO55_RS00545 PF00072 Response regulator receiver domain LRO55_RS00555 PF00106 short chain dehydrogenase LRO55_RS00560 PF01554 MatE LRO55_RS00565 PF00155 Aminotransferase class I and II LRO55_RS00570 PF04286 Protein of unknown function (DUF445) LRO55_RS00585 PF04262 Glutamate-cysteine ligase LRO55_RS00590 PF02600 Disulfide bond formation protein DsbB LRO55_RS00595 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) LRO55_RS00595 PF04717 Type VI secretion system, phage-baseplate injector LRO55_RS00595 PF13296 Putative type VI secretion system Rhs element Vgr LRO55_RS00600 PF00182 Chitinase class I LRO55_RS00620 PF05728 Uncharacterised protein family (UPF0227) LRO55_RS00625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRO55_RS00625 PF01751 Toprim domain LRO55_RS00625 PF00204 DNA gyrase B LRO55_RS00625 PF00986 DNA gyrase B subunit, carboxyl terminus LRO55_RS00630 PF04115 Ureidoglycolate lyase LRO55_RS00635 PF03561 Allantoicase repeat LRO55_RS00640 PF01494 FAD binding domain LRO55_RS00650 PF00860 Permease family LRO55_RS00655 PF00576 HIUase/Transthyretin family LRO55_RS00685 PF11412 Disulphide bond corrector protein DsbC LRO55_RS00685 PF02683 Cytochrome C biogenesis protein transmembrane region LRO55_RS00690 PF07694 5TMR of 5TMR-LYT LRO55_RS00690 PF00990 Diguanylate cyclase, GGDEF domain LRO55_RS00695 PF07859 alpha/beta hydrolase fold LRO55_RS00705 PF03960 ArsC family LRO55_RS00710 PF03372 Endonuclease/Exonuclease/phosphatase family LRO55_RS00715 PF00156 Phosphoribosyl transferase domain LRO55_RS00720 PF07715 TonB-dependent Receptor Plug Domain LRO55_RS00720 PF00593 TonB dependent receptor LRO55_RS00730 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LRO55_RS00730 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LRO55_RS00735 PF04101 Glycosyltransferase family 28 C-terminal domain LRO55_RS00735 PF03033 Glycosyltransferase family 28 N-terminal domain LRO55_RS00740 PF08245 Mur ligase middle domain LRO55_RS00740 PF01225 Mur ligase family, catalytic domain LRO55_RS00740 PF02875 Mur ligase family, glutamate ligase domain LRO55_RS00745 PF07478 D-ala D-ala ligase C-terminus LRO55_RS00745 PF01820 D-ala D-ala ligase N-terminus LRO55_RS00750 PF03799 Cell division protein FtsQ LRO55_RS00750 PF08478 POTRA domain, FtsQ-type LRO55_RS00755 PF02491 SHS2 domain inserted in FTSA LRO55_RS00760 PF12327 FtsZ family, C-terminal domain LRO55_RS00760 PF00091 Tubulin/FtsZ family, GTPase domain LRO55_RS00765 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LRO55_RS00775 PF01551 Peptidase family M23 LRO55_RS00780 PF17831 Pyruvate dehydrogenase E1 component middle domain LRO55_RS00780 PF00456 Transketolase, thiamine diphosphate binding domain LRO55_RS00785 PF00364 Biotin-requiring enzyme LRO55_RS00785 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LRO55_RS00785 PF02817 e3 binding domain LRO55_RS00795 PF01169 Uncharacterized protein family UPF0016 LRO55_RS00800 PF00593 TonB dependent receptor LRO55_RS00800 PF07715 TonB-dependent Receptor Plug Domain LRO55_RS00810 PF00478 IMP dehydrogenase / GMP reductase domain LRO55_RS00810 PF00571 CBS domain LRO55_RS00815 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LRO55_RS00815 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LRO55_RS00815 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LRO55_RS00815 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LRO55_RS00820 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LRO55_RS00820 PF01243 Pyridoxamine 5'-phosphate oxidase LRO55_RS00825 PF01368 DHH family LRO55_RS00825 PF02272 DHHA1 domain LRO55_RS00825 PF17768 RecJ OB domain LRO55_RS00850 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LRO55_RS00855 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LRO55_RS00860 PF04452 RNA methyltransferase LRO55_RS00865 PF00924 Mechanosensitive ion channel LRO55_RS00865 PF05552 Conserved TM helix LRO55_RS00875 PF00501 AMP-binding enzyme LRO55_RS00875 PF13193 AMP-binding enzyme C-terminal domain LRO55_RS00875 PF16177 Acetyl-coenzyme A synthetase N-terminus LRO55_RS00880 PF00857 Isochorismatase family LRO55_RS00885 PF01037 Lrp/AsnC ligand binding domain LRO55_RS00890 PF00296 Luciferase-like monooxygenase LRO55_RS00895 PF03358 NADPH-dependent FMN reductase LRO55_RS00900 PF00196 Bacterial regulatory proteins, luxR family LRO55_RS00900 PF00072 Response regulator receiver domain LRO55_RS00910 PF00672 HAMP domain LRO55_RS00910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRO55_RS00910 PF00512 His Kinase A (phospho-acceptor) domain LRO55_RS00910 PF01627 Hpt domain LRO55_RS00910 PF00072 Response regulator receiver domain LRO55_RS00915 PF04341 Protein of unknown function, DUF485 LRO55_RS00920 PF00474 Sodium:solute symporter family LRO55_RS00930 PF02028 BCCT, betaine/carnitine/choline family transporter LRO55_RS00940 PF00990 Diguanylate cyclase, GGDEF domain LRO55_RS00945 PF17760 UvrA interaction domain LRO55_RS00945 PF17755 UvrA DNA-binding domain LRO55_RS00945 PF00005 ABC transporter LRO55_RS00950 PF00440 Bacterial regulatory proteins, tetR family LRO55_RS00950 PF16925 Tetracyclin repressor-like, C-terminal domain LRO55_RS00955 PF00107 Zinc-binding dehydrogenase LRO55_RS00955 PF08240 Alcohol dehydrogenase GroES-like domain LRO55_RS00965 PF06942 GlpM protein LRO55_RS00970 PF00106 short chain dehydrogenase LRO55_RS00975 PF00376 MerR family regulatory protein LRO55_RS00975 PF09278 MerR, DNA binding LRO55_RS00980 PF03070 TENA/THI-4/PQQC family LRO55_RS00980 PF08543 Phosphomethylpyrimidine kinase LRO55_RS00980 PF02581 Thiamine monophosphate synthase LRO55_RS00990 PF07690 Major Facilitator Superfamily LRO55_RS00995 PF00436 Single-strand binding protein family LRO55_RS01005 PF03591 AzlC protein LRO55_RS01015 PF00324 Amino acid permease LRO55_RS01020 PF00155 Aminotransferase class I and II LRO55_RS01020 PF00392 Bacterial regulatory proteins, gntR family LRO55_RS01025 PF00202 Aminotransferase class-III LRO55_RS01030 PF00171 Aldehyde dehydrogenase family LRO55_RS01035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS01040 PF00857 Isochorismatase family LRO55_RS01045 PF02678 Pirin LRO55_RS01045 PF05726 Pirin C-terminal cupin domain LRO55_RS01050 PF01593 Flavin containing amine oxidoreductase LRO55_RS01080 PF07690 Major Facilitator Superfamily LRO55_RS01085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS01085 PF03466 LysR substrate binding domain LRO55_RS01105 PF02655 ATP-grasp domain LRO55_RS01105 PF00206 Lyase LRO55_RS01125 PF00248 Aldo/keto reductase family LRO55_RS01130 PF02311 AraC-like ligand binding domain LRO55_RS01130 PF12833 Helix-turn-helix domain LRO55_RS01145 PF00005 ABC transporter LRO55_RS01160 PF01638 HxlR-like helix-turn-helix LRO55_RS01165 PF02525 Flavodoxin-like fold LRO55_RS01185 PF12833 Helix-turn-helix domain LRO55_RS01195 PF02705 K+ potassium transporter LRO55_RS01225 PF00230 Major intrinsic protein LRO55_RS01240 PF00977 Histidine biosynthesis protein LRO55_RS01245 PF01636 Phosphotransferase enzyme family LRO55_RS01260 PF03992 Antibiotic biosynthesis monooxygenase LRO55_RS01265 PF00892 EamA-like transporter family LRO55_RS01275 PF00664 ABC transporter transmembrane region LRO55_RS01275 PF00005 ABC transporter LRO55_RS01280 PF00977 Histidine biosynthesis protein LRO55_RS01295 PF00117 Glutamine amidotransferase class-I LRO55_RS01300 PF00475 Imidazoleglycerol-phosphate dehydratase LRO55_RS01320 PF00583 Acetyltransferase (GNAT) family LRO55_RS01325 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain LRO55_RS01325 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain LRO55_RS01335 PF00672 HAMP domain LRO55_RS01335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRO55_RS01335 PF00512 His Kinase A (phospho-acceptor) domain LRO55_RS01340 PF00072 Response regulator receiver domain LRO55_RS01340 PF00486 Transcriptional regulatory protein, C terminal LRO55_RS01345 PF17674 HHH domain LRO55_RS01345 PF00575 S1 RNA binding domain LRO55_RS01345 PF09371 Tex-like protein N-terminal domain LRO55_RS01345 PF16921 Tex protein YqgF-like domain LRO55_RS01350 PF01740 STAS domain LRO55_RS01350 PF00916 Sulfate permease family LRO55_RS01355 PF00106 short chain dehydrogenase LRO55_RS01360 PF01053 Cys/Met metabolism PLP-dependent enzyme LRO55_RS01365 PF00005 ABC transporter LRO55_RS01365 PF12848 ABC transporter LRO55_RS01390 PF00529 HlyD membrane-fusion protein of T1SS LRO55_RS01390 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LRO55_RS01395 PF00873 AcrB/AcrD/AcrF family LRO55_RS01400 PF01545 Cation efflux family LRO55_RS01430 PF00324 Amino acid permease LRO55_RS01445 PF00749 tRNA synthetases class I (E and Q), catalytic domain LRO55_RS01460 PF01795 MraW methylase family LRO55_RS01470 PF00905 Penicillin binding protein transpeptidase domain LRO55_RS01470 PF03717 Penicillin-binding Protein dimerisation domain LRO55_RS01475 PF01225 Mur ligase family, catalytic domain LRO55_RS01475 PF08245 Mur ligase middle domain LRO55_RS01475 PF02875 Mur ligase family, glutamate ligase domain LRO55_RS01480 PF08245 Mur ligase middle domain LRO55_RS01480 PF02875 Mur ligase family, glutamate ligase domain LRO55_RS01480 PF01225 Mur ligase family, catalytic domain LRO55_RS01485 PF00953 Glycosyl transferase family 4 LRO55_RS01495 PF13847 Methyltransferase domain LRO55_RS01500 PF17092 Penicillin-binding protein OB-like domain LRO55_RS01500 PF00912 Transglycosylase LRO55_RS01500 PF00905 Penicillin binding protein transpeptidase domain LRO55_RS01505 PF11104 Type IV pilus assembly protein PilM; LRO55_RS01510 PF05137 Fimbrial assembly protein (PilN) LRO55_RS01515 PF04350 Pilus assembly protein, PilO LRO55_RS01525 PF03958 Bacterial type II/III secretion system short domain LRO55_RS01525 PF07660 Secretin and TonB N terminus short domain LRO55_RS01525 PF11741 AMIN domain LRO55_RS01525 PF00263 Bacterial type II and III secretion system protein LRO55_RS01530 PF01202 Shikimate kinase LRO55_RS01535 PF01761 3-dehydroquinate synthase LRO55_RS01545 PF00310 Glutamine amidotransferases class-II LRO55_RS01545 PF01645 Conserved region in glutamate synthase LRO55_RS01545 PF01493 GXGXG motif LRO55_RS01545 PF04898 Glutamate synthase central domain LRO55_RS01550 PF07992 Pyridine nucleotide-disulphide oxidoreductase LRO55_RS01550 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LRO55_RS01560 PF04011 LemA family LRO55_RS01565 PF04536 TPM domain LRO55_RS01575 PF00114 Pilin (bacterial filament) LRO55_RS01575 PF07963 Prokaryotic N-terminal methylation motif LRO55_RS01585 PF04932 O-Antigen ligase LRO55_RS01585 PF15864 Protein glycosylation ligase LRO55_RS01585 PF11846 Virulence factor membrane-bound polymerase, C-terminal LRO55_RS01590 PF00210 Ferritin-like domain LRO55_RS01595 PF04324 BFD-like [2Fe-2S] binding domain LRO55_RS01600 PF01042 Endoribonuclease L-PSP LRO55_RS01605 PF02824 TGS domain LRO55_RS01605 PF04607 Region found in RelA / SpoT proteins LRO55_RS01605 PF13291 ACT domain LRO55_RS01615 PF01192 RNA polymerase Rpb6 LRO55_RS01620 PF00625 Guanylate kinase LRO55_RS01625 PF02401 LytB protein LRO55_RS01635 PF00114 Pilin (bacterial filament) LRO55_RS01635 PF07963 Prokaryotic N-terminal methylation motif LRO55_RS01660 PF07963 Prokaryotic N-terminal methylation motif LRO55_RS01660 PF00114 Pilin (bacterial filament) LRO55_RS01670 PF00886 Ribosomal protein S16 LRO55_RS01675 PF05239 PRC-barrel domain LRO55_RS01675 PF01782 RimM N-terminal domain LRO55_RS01680 PF01746 tRNA (Guanine-1)-methyltransferase LRO55_RS01685 PF01245 Ribosomal protein L19 LRO55_RS01690 PF00561 alpha/beta hydrolase fold LRO55_RS01695 PF03280 Proteobacterial lipase chaperone protein LRO55_RS01700 PF01509 TruB family pseudouridylate synthase (N terminal domain) LRO55_RS01700 PF16198 tRNA pseudouridylate synthase B C-terminal domain LRO55_RS01700 PF09157 Pseudouridine synthase II TruB, C-terminal LRO55_RS01705 PF01925 Sulfite exporter TauE/SafE LRO55_RS01715 PF00892 EamA-like transporter family LRO55_RS01720 PF00892 EamA-like transporter family LRO55_RS01725 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LRO55_RS01725 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LRO55_RS01730 PF02913 FAD linked oxidases, C-terminal domain LRO55_RS01730 PF01565 FAD binding domain LRO55_RS01745 PF03992 Antibiotic biosynthesis monooxygenase LRO55_RS01750 PF02525 Flavodoxin-like fold LRO55_RS01760 PF07690 Major Facilitator Superfamily LRO55_RS01770 PF12805 FUSC-like inner membrane protein yccS LRO55_RS01775 PF00080 Copper/zinc superoxide dismutase (SODC) LRO55_RS01780 PF01594 AI-2E family transporter LRO55_RS01785 PF13614 AAA domain LRO55_RS01805 PF08241 Methyltransferase domain LRO55_RS01815 PF00324 Amino acid permease LRO55_RS01820 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LRO55_RS01820 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LRO55_RS01825 PF00202 Aminotransferase class-III LRO55_RS01830 PF04958 Arginine N-succinyltransferase beta subunit LRO55_RS01835 PF00171 Aldehyde dehydrogenase family LRO55_RS01840 PF04996 Succinylarginine dihydrolase LRO55_RS01845 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family LRO55_RS01860 PF05922 Peptidase inhibitor I9 LRO55_RS01860 PF00082 Subtilase family LRO55_RS01875 PF03466 LysR substrate binding domain LRO55_RS01875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS01880 PF01177 Asp/Glu/Hydantoin racemase LRO55_RS01885 PF03466 LysR substrate binding domain LRO55_RS01885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS01890 PF00892 EamA-like transporter family LRO55_RS01905 PF05746 DALR anticodon binding domain LRO55_RS01905 PF02092 Glycyl-tRNA synthetase beta subunit LRO55_RS01910 PF02091 Glycyl-tRNA synthetase alpha subunit LRO55_RS01930 PF00571 CBS domain LRO55_RS01930 PF01743 Poly A polymerase head domain LRO55_RS01935 PF04024 PspC domain LRO55_RS01945 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LRO55_RS01945 PF12806 Acetyl-CoA dehydrogenase C-terminal like LRO55_RS01945 PF02770 Acyl-CoA dehydrogenase, middle domain LRO55_RS01945 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LRO55_RS01955 PF08501 Shikimate dehydrogenase substrate binding domain LRO55_RS01955 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LRO55_RS01955 PF01488 Shikimate / quinate 5-dehydrogenase LRO55_RS01960 PF01218 Coproporphyrinogen III oxidase LRO55_RS01965 PF00925 GTP cyclohydrolase II LRO55_RS01970 PF02780 Transketolase, C-terminal domain LRO55_RS01970 PF02779 Transketolase, pyrimidine binding domain LRO55_RS01970 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LRO55_RS01975 PF00459 Inositol monophosphatase family LRO55_RS01980 PF00271 Helicase conserved C-terminal domain LRO55_RS01980 PF00270 DEAD/DEAH box helicase LRO55_RS01990 PF00005 ABC transporter LRO55_RS01995 PF02405 Permease MlaE LRO55_RS02015 PF01544 CorA-like Mg2+ transporter protein LRO55_RS02020 PF03641 Possible lysine decarboxylase LRO55_RS02025 PF00293 NUDIX domain LRO55_RS02030 PF00156 Phosphoribosyl transferase domain LRO55_RS02035 PF00270 DEAD/DEAH box helicase LRO55_RS02035 PF17191 RecG wedge domain LRO55_RS02035 PF00271 Helicase conserved C-terminal domain LRO55_RS02050 PF01553 Acyltransferase LRO55_RS02060 PF00375 Sodium:dicarboxylate symporter family LRO55_RS02070 PF01926 50S ribosome-binding GTPase LRO55_RS02075 PF02082 Transcriptional regulator LRO55_RS02080 PF00042 Globin LRO55_RS02080 PF00175 Oxidoreductase NAD-binding domain LRO55_RS02080 PF00970 Oxidoreductase FAD-binding domain LRO55_RS02085 PF05872 Bacterial protein of unknown function (DUF853) LRO55_RS02090 PF01053 Cys/Met metabolism PLP-dependent enzyme LRO55_RS02095 PF00117 Glutamine amidotransferase class-I LRO55_RS02100 PF00338 Ribosomal protein S10p/S20e LRO55_RS02105 PF00297 Ribosomal protein L3 LRO55_RS02110 PF00573 Ribosomal protein L4/L1 family LRO55_RS02115 PF00276 Ribosomal protein L23 LRO55_RS02120 PF03947 Ribosomal Proteins L2, C-terminal domain LRO55_RS02120 PF00181 Ribosomal Proteins L2, RNA binding domain LRO55_RS02125 PF00203 Ribosomal protein S19 LRO55_RS02130 PF00237 Ribosomal protein L22p/L17e LRO55_RS02140 PF00252 Ribosomal protein L16p/L10e LRO55_RS02145 PF00831 Ribosomal L29 protein LRO55_RS02150 PF00366 Ribosomal protein S17 LRO55_RS02155 PF00238 Ribosomal protein L14p/L23e LRO55_RS02160 PF00467 KOW motif LRO55_RS02160 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LRO55_RS02165 PF00281 Ribosomal protein L5 LRO55_RS02165 PF00673 ribosomal L5P family C-terminus LRO55_RS02170 PF00253 Ribosomal protein S14p/S29e LRO55_RS02175 PF00410 Ribosomal protein S8 LRO55_RS02180 PF00347 Ribosomal protein L6 LRO55_RS02185 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LRO55_RS02190 PF00333 Ribosomal protein S5, N-terminal domain LRO55_RS02190 PF03719 Ribosomal protein S5, C-terminal domain LRO55_RS02195 PF00327 Ribosomal protein L30p/L7e LRO55_RS02200 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LRO55_RS02205 PF00344 SecY translocase LRO55_RS02210 PF00444 Ribosomal protein L36 LRO55_RS02215 PF00416 Ribosomal protein S13/S18 LRO55_RS02220 PF00411 Ribosomal protein S11 LRO55_RS02225 PF01479 S4 domain LRO55_RS02225 PF00163 Ribosomal protein S4/S9 N-terminal domain LRO55_RS02230 PF01000 RNA polymerase Rpb3/RpoA insert domain LRO55_RS02230 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LRO55_RS02230 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LRO55_RS02235 PF01196 Ribosomal protein L17 LRO55_RS02240 PF00743 Flavin-binding monooxygenase-like LRO55_RS02245 PF02770 Acyl-CoA dehydrogenase, middle domain LRO55_RS02245 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LRO55_RS02245 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LRO55_RS02250 PF03937 Flavinator of succinate dehydrogenase LRO55_RS02280 PF09526 Probable metal-binding protein (DUF2387) LRO55_RS02285 PF01432 Peptidase family M3 LRO55_RS02290 PF08461 Ribonuclease R winged-helix domain LRO55_RS02290 PF08206 Ribonuclease B OB domain LRO55_RS02290 PF00773 RNB domain LRO55_RS02290 PF00575 S1 RNA binding domain LRO55_RS02290 PF17876 Cold shock domain LRO55_RS02335 PF01557 Fumarylacetoacetate (FAA) hydrolase family LRO55_RS02340 PF03631 Virulence factor BrkB LRO55_RS02345 PF03358 NADPH-dependent FMN reductase LRO55_RS02370 PF02130 Uncharacterized protein family UPF0054 LRO55_RS02375 PF02562 PhoH-like protein LRO55_RS02380 PF04055 Radical SAM superfamily LRO55_RS02380 PF01938 TRAM domain LRO55_RS02380 PF00919 Uncharacterized protein family UPF0004 LRO55_RS02385 PF01464 Transglycosylase SLT domain LRO55_RS02385 PF10145 Phage-related minor tail protein LRO55_RS02385 PF01551 Peptidase family M23 LRO55_RS02395 PF00056 lactate/malate dehydrogenase, NAD binding domain LRO55_RS02395 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LRO55_RS02415 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ LRO55_RS02420 PF01066 CDP-alcohol phosphatidyltransferase LRO55_RS02470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LRO55_RS02470 PF02770 Acyl-CoA dehydrogenase, middle domain LRO55_RS02470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LRO55_RS02480 PF13302 Acetyltransferase (GNAT) domain LRO55_RS02485 PF00440 Bacterial regulatory proteins, tetR family LRO55_RS02485 PF17932 Tetracyclin repressor-like, C-terminal domain LRO55_RS02500 PF01039 Carboxyl transferase domain LRO55_RS02505 PF02770 Acyl-CoA dehydrogenase, middle domain LRO55_RS02505 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LRO55_RS02505 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LRO55_RS02515 PF02785 Biotin carboxylase C-terminal domain LRO55_RS02515 PF00289 Biotin carboxylase, N-terminal domain LRO55_RS02515 PF00364 Biotin-requiring enzyme LRO55_RS02515 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LRO55_RS02525 PF04386 Stringent starvation protein B LRO55_RS02530 PF00043 Glutathione S-transferase, C-terminal domain LRO55_RS02530 PF13417 Glutathione S-transferase, N-terminal domain LRO55_RS02535 PF00380 Ribosomal protein S9/S16 LRO55_RS02540 PF00572 Ribosomal protein L13 LRO55_RS02545 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LRO55_RS02550 PF00398 Ribosomal RNA adenine dimethylase LRO55_RS02555 PF00149 Calcineurin-like phosphoesterase LRO55_RS02575 PF16360 GTP-binding GTPase Middle Region LRO55_RS02575 PF13167 GTP-binding GTPase N-terminal LRO55_RS02575 PF01926 50S ribosome-binding GTPase LRO55_RS02585 PF13091 PLD-like domain LRO55_RS02590 PF00149 Calcineurin-like phosphoesterase LRO55_RS02590 PF10518 TAT (twin-arginine translocation) pathway signal sequence LRO55_RS02595 PF00691 OmpA family LRO55_RS02595 PF00223 Photosystem I psaA/psaB protein LRO55_RS02600 PF00990 Diguanylate cyclase, GGDEF domain LRO55_RS02600 PF17152 Periplasmic sensor domain LRO55_RS02605 PF13689 YfiR/HmsC-like LRO55_RS02640 PF00403 Heavy-metal-associated domain LRO55_RS02640 PF07992 Pyridine nucleotide-disulphide oxidoreductase LRO55_RS02640 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LRO55_RS02650 PF04273 Putative phosphatase (DUF442) LRO55_RS02650 PF00753 Metallo-beta-lactamase superfamily LRO55_RS02660 PF00085 Thioredoxin LRO55_RS02665 PF03061 Thioesterase superfamily LRO55_RS02675 PF04461 Protein of unknown function (DUF520) LRO55_RS02685 PF01266 FAD dependent oxidoreductase LRO55_RS02685 PF05430 S-adenosyl-L-methionine-dependent methyltransferase LRO55_RS02695 PF03795 YCII-related domain LRO55_RS02700 PF04279 Intracellular septation protein A LRO55_RS02705 PF02811 PHP domain LRO55_RS02710 PF01062 Bestrophin, RFP-TM, chloride channel LRO55_RS02715 PF04002 RadC-like JAB domain LRO55_RS02720 PF02441 Flavoprotein LRO55_RS02720 PF04127 DNA / pantothenate metabolism flavoprotein LRO55_RS02725 PF02355 Protein export membrane protein LRO55_RS02725 PF07549 SecD/SecF GG Motif LRO55_RS02730 PF02355 Protein export membrane protein LRO55_RS02730 PF13721 SecD export protein N-terminal TM region LRO55_RS02730 PF07549 SecD/SecF GG Motif LRO55_RS02735 PF02699 Preprotein translocase subunit LRO55_RS02740 PF01702 Queuine tRNA-ribosyltransferase LRO55_RS02755 PF02547 Queuosine biosynthesis protein LRO55_RS02790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRO55_RS02790 PF00672 HAMP domain LRO55_RS02790 PF00512 His Kinase A (phospho-acceptor) domain LRO55_RS02790 PF00072 Response regulator receiver domain LRO55_RS02790 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LRO55_RS02790 PF01627 Hpt domain LRO55_RS02795 PF03710 Glutamate-ammonia ligase adenylyltransferase LRO55_RS02795 PF08335 GlnD PII-uridylyltransferase LRO55_RS02800 PF01063 Amino-transferase class IV LRO55_RS02815 PF01522 Polysaccharide deacetylase LRO55_RS02820 PF00535 Glycosyl transferase family 2 LRO55_RS02825 PF13439 Glycosyltransferase Family 4 LRO55_RS02825 PF00534 Glycosyl transferases group 1 LRO55_RS02840 PF00535 Glycosyl transferase family 2 LRO55_RS02840 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase LRO55_RS02855 PF17101 Stealth protein CR1, conserved region 1 LRO55_RS02855 PF11380 Stealth protein CR2, conserved region 2 LRO55_RS02855 PF17103 Stealth protein CR4, conserved region 4 LRO55_RS02860 PF02938 GAD domain LRO55_RS02860 PF01336 OB-fold nucleic acid binding domain LRO55_RS02860 PF00152 tRNA synthetases class II (D, K and N) LRO55_RS02870 PF00593 TonB dependent receptor LRO55_RS02870 PF07715 TonB-dependent Receptor Plug Domain LRO55_RS02890 PF06146 Phosphate-starvation-inducible E LRO55_RS02895 PF00043 Glutathione S-transferase, C-terminal domain LRO55_RS02895 PF02798 Glutathione S-transferase, N-terminal domain LRO55_RS02900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS02900 PF03466 LysR substrate binding domain LRO55_RS02905 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LRO55_RS02905 PF02770 Acyl-CoA dehydrogenase, middle domain LRO55_RS02905 PF12806 Acetyl-CoA dehydrogenase C-terminal like LRO55_RS02905 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LRO55_RS02910 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LRO55_RS02910 PF02770 Acyl-CoA dehydrogenase, middle domain LRO55_RS02910 PF12806 Acetyl-CoA dehydrogenase C-terminal like LRO55_RS02910 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LRO55_RS02920 PF00512 His Kinase A (phospho-acceptor) domain LRO55_RS02920 PF00672 HAMP domain LRO55_RS02920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRO55_RS02925 PF00486 Transcriptional regulatory protein, C terminal LRO55_RS02925 PF00072 Response regulator receiver domain LRO55_RS02935 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LRO55_RS02955 PF01923 Cobalamin adenosyltransferase LRO55_RS02960 PF00593 TonB dependent receptor LRO55_RS02960 PF07715 TonB-dependent Receptor Plug Domain LRO55_RS02965 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LRO55_RS02970 PF00291 Pyridoxal-phosphate dependent enzyme LRO55_RS02995 PF00290 Tryptophan synthase alpha chain LRO55_RS03000 PF01039 Carboxyl transferase domain LRO55_RS03005 PF08245 Mur ligase middle domain LRO55_RS03005 PF02875 Mur ligase family, glutamate ligase domain LRO55_RS03025 PF00753 Metallo-beta-lactamase superfamily LRO55_RS03030 PF00578 AhpC/TSA family LRO55_RS03030 PF10417 C-terminal domain of 1-Cys peroxiredoxin LRO55_RS03035 PF02810 SEC-C motif LRO55_RS03035 PF07517 SecA DEAD-like domain LRO55_RS03035 PF01043 SecA preprotein cross-linking domain LRO55_RS03035 PF07516 SecA Wing and Scaffold domain LRO55_RS03045 PF00083 Sugar (and other) transporter LRO55_RS03045 PF07690 Major Facilitator Superfamily LRO55_RS03050 PF03006 Haemolysin-III related LRO55_RS03060 PF13673 Acetyltransferase (GNAT) domain LRO55_RS03075 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LRO55_RS03075 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LRO55_RS03075 PF00378 Enoyl-CoA hydratase/isomerase LRO55_RS03080 PF00108 Thiolase, N-terminal domain LRO55_RS03080 PF02803 Thiolase, C-terminal domain LRO55_RS03085 PF12833 Helix-turn-helix domain LRO55_RS03085 PF02311 AraC-like ligand binding domain LRO55_RS03090 PF02515 CoA-transferase family III LRO55_RS03095 PF04966 Carbohydrate-selective porin, OprB family LRO55_RS03100 PF01011 PQQ enzyme repeat LRO55_RS03105 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LRO55_RS03105 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LRO55_RS03115 PF00893 Small Multidrug Resistance protein LRO55_RS03125 PF02803 Thiolase, C-terminal domain LRO55_RS03125 PF00108 Thiolase, N-terminal domain LRO55_RS03130 PF07963 Prokaryotic N-terminal methylation motif LRO55_RS03130 PF00114 Pilin (bacterial filament) LRO55_RS03135 PF13505 Outer membrane protein beta-barrel domain LRO55_RS03135 PF00691 OmpA family LRO55_RS03145 PF01139 tRNA-splicing ligase RtcB LRO55_RS03150 PF00324 Amino acid permease LRO55_RS03155 PF08468 Methyltransferase small domain N-terminal LRO55_RS03155 PF05175 Methyltransferase small domain LRO55_RS03160 PF00860 Permease family LRO55_RS03165 PF03144 Elongation factor Tu domain 2 LRO55_RS03165 PF00679 Elongation factor G C-terminus LRO55_RS03165 PF00009 Elongation factor Tu GTP binding domain LRO55_RS03170 PF01741 Large-conductance mechanosensitive channel, MscL LRO55_RS03185 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LRO55_RS03185 PF06827 Zinc finger found in FPG and IleRS LRO55_RS03185 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LRO55_RS03190 PF02245 Methylpurine-DNA glycosylase (MPG) LRO55_RS03195 PF00593 TonB dependent receptor LRO55_RS03195 PF07715 TonB-dependent Receptor Plug Domain LRO55_RS03200 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LRO55_RS03215 PF13098 Thioredoxin-like domain LRO55_RS03215 PF10411 Disulfide bond isomerase protein N-terminus LRO55_RS03220 PF01571 Aminomethyltransferase folate-binding domain LRO55_RS03235 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LRO55_RS03235 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LRO55_RS03240 PF00860 Permease family LRO55_RS03245 PF01613 Flavin reductase like domain LRO55_RS03250 PF01042 Endoribonuclease L-PSP LRO55_RS03255 PF00857 Isochorismatase family LRO55_RS03260 PF00296 Luciferase-like monooxygenase LRO55_RS03265 PF00881 Nitroreductase family LRO55_RS03270 PF12697 Alpha/beta hydrolase family LRO55_RS03280 PF03831 PhnA domain LRO55_RS03280 PF08274 PhnA Zinc-Ribbon LRO55_RS03285 PF07411 Domain of unknown function (DUF1508) LRO55_RS03290 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LRO55_RS03290 PF04073 Aminoacyl-tRNA editing domain LRO55_RS03290 PF03129 Anticodon binding domain LRO55_RS03295 PF00873 AcrB/AcrD/AcrF family LRO55_RS03310 PF00072 Response regulator receiver domain LRO55_RS03315 PF00072 Response regulator receiver domain LRO55_RS03320 PF01584 CheW-like domain LRO55_RS03325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LRO55_RS03325 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LRO55_RS03330 PF01584 CheW-like domain LRO55_RS03330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRO55_RS03330 PF00072 Response regulator receiver domain LRO55_RS03330 PF01627 Hpt domain LRO55_RS03340 PF01546 Peptidase family M20/M25/M40 LRO55_RS03340 PF07687 Peptidase dimerisation domain LRO55_RS03355 PF04304 Protein of unknown function (DUF454) LRO55_RS03360 PF17969 L,D-transpeptidase C-terminal domain LRO55_RS03360 PF03734 L,D-transpeptidase catalytic domain LRO55_RS03400 PF00175 Oxidoreductase NAD-binding domain LRO55_RS03400 PF00667 FAD binding domain LRO55_RS03400 PF00258 Flavodoxin LRO55_RS03410 PF12805 FUSC-like inner membrane protein yccS LRO55_RS03415 PF07690 Major Facilitator Superfamily LRO55_RS03420 PF00881 Nitroreductase family LRO55_RS03435 PF01235 Sodium:alanine symporter family LRO55_RS03440 PF01734 Patatin-like phospholipase LRO55_RS03445 PF00291 Pyridoxal-phosphate dependent enzyme LRO55_RS03445 PF13291 ACT domain LRO55_RS03450 PF05992 SbmA/BacA-like family LRO55_RS03480 PF02934 GatB/GatE catalytic domain LRO55_RS03480 PF02637 GatB domain LRO55_RS03485 PF01425 Amidase LRO55_RS03490 PF02686 Glu-tRNAGln amidotransferase C subunit LRO55_RS03500 PF04085 rod shape-determining protein MreC LRO55_RS03505 PF04093 rod shape-determining protein MreD LRO55_RS03510 PF02545 Maf-like protein LRO55_RS03515 PF00575 S1 RNA binding domain LRO55_RS03515 PF10150 Ribonuclease E/G family LRO55_RS03525 PF06974 Protein of unknown function (DUF1298) LRO55_RS03525 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain LRO55_RS03530 PF01507 Phosphoadenosine phosphosulfate reductase family LRO55_RS03545 PF02525 Flavodoxin-like fold LRO55_RS03565 PF02673 Bacitracin resistance protein BacA LRO55_RS03570 PF06719 AraC-type transcriptional regulator N-terminus LRO55_RS03570 PF12833 Helix-turn-helix domain LRO55_RS03575 PF16197 Ketoacyl-synthetase C-terminal extension LRO55_RS03575 PF08240 Alcohol dehydrogenase GroES-like domain LRO55_RS03575 PF00109 Beta-ketoacyl synthase, N-terminal domain LRO55_RS03575 PF14765 Polyketide synthase dehydratase LRO55_RS03575 PF00698 Acyl transferase domain LRO55_RS03575 PF00550 Phosphopantetheine attachment site LRO55_RS03575 PF08659 KR domain LRO55_RS03575 PF02801 Beta-ketoacyl synthase, C-terminal domain LRO55_RS03575 PF00107 Zinc-binding dehydrogenase LRO55_RS03580 PF01965 DJ-1/PfpI family LRO55_RS03610 PF00324 Amino acid permease LRO55_RS03615 PF04303 PrpF protein LRO55_RS03620 PF00348 Polyprenyl synthetase LRO55_RS03625 PF04237 YjbR LRO55_RS03630 PF01145 SPFH domain / Band 7 family LRO55_RS03640 PF01734 Patatin-like phospholipase LRO55_RS03665 PF08019 Phosphoethanolamine transferase EptA/EptB LRO55_RS03665 PF00884 Sulfatase LRO55_RS03670 PF00072 Response regulator receiver domain LRO55_RS03670 PF00486 Transcriptional regulatory protein, C terminal LRO55_RS03675 PF08521 Two-component sensor kinase N-terminal LRO55_RS03675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRO55_RS03675 PF00512 His Kinase A (phospho-acceptor) domain LRO55_RS03685 PF00909 Ammonium Transporter Family LRO55_RS03690 PF03466 LysR substrate binding domain LRO55_RS03690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS03710 PF08264 Anticodon-binding domain of tRNA LRO55_RS03710 PF00133 tRNA synthetases class I (I, L, M and V) LRO55_RS03710 PF10458 Valyl tRNA synthetase tRNA binding arm LRO55_RS03725 PF07690 Major Facilitator Superfamily LRO55_RS03730 PF01906 Putative heavy-metal-binding LRO55_RS03735 PF01906 Putative heavy-metal-binding LRO55_RS03740 PF02321 Outer membrane efflux protein LRO55_RS03745 PF00873 AcrB/AcrD/AcrF family LRO55_RS03750 PF00529 HlyD membrane-fusion protein of T1SS LRO55_RS03750 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LRO55_RS03755 PF01569 PAP2 superfamily LRO55_RS03765 PF00348 Polyprenyl synthetase LRO55_RS03770 PF00829 Ribosomal prokaryotic L21 protein LRO55_RS03775 PF01016 Ribosomal L27 protein LRO55_RS03780 PF03548 Outer membrane lipoprotein carrier protein LolA LRO55_RS03790 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LRO55_RS03790 PF02403 Seryl-tRNA synthetase N-terminal domain LRO55_RS03795 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LRO55_RS03795 PF14824 Sirohaem biosynthesis protein central LRO55_RS03795 PF10414 Sirohaem synthase dimerisation region LRO55_RS03800 PF00588 SpoU rRNA Methylase family LRO55_RS03830 PF03358 NADPH-dependent FMN reductase LRO55_RS03835 PF13520 Amino acid permease LRO55_RS03840 PF00465 Iron-containing alcohol dehydrogenase LRO55_RS03850 PF03099 Biotin/lipoate A/B protein ligase family LRO55_RS03855 PF04359 Protein of unknown function (DUF493) LRO55_RS03860 PF04545 Sigma-70, region 4 LRO55_RS03860 PF04539 Sigma-70 region 3 LRO55_RS03860 PF04542 Sigma-70 region 2 LRO55_RS03860 PF00140 Sigma-70 factor, region 1.2 LRO55_RS03860 PF03979 Sigma-70 factor, region 1.1 LRO55_RS03860 PF04546 Sigma-70, non-essential region LRO55_RS03875 PF00581 Rhodanese-like domain LRO55_RS03875 PF17773 UPF0176 acylphosphatase like domain LRO55_RS03885 PF00285 Citrate synthase, C-terminal domain LRO55_RS03890 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LRO55_RS03895 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LRO55_RS03900 PF00890 FAD binding domain LRO55_RS03900 PF02910 Fumarate reductase flavoprotein C-term LRO55_RS03905 PF13085 2Fe-2S iron-sulfur cluster binding domain LRO55_RS03920 PF00676 Dehydrogenase E1 component LRO55_RS03920 PF16870 2-oxoglutarate dehydrogenase C-terminal LRO55_RS03920 PF02779 Transketolase, pyrimidine binding domain LRO55_RS03920 PF16078 2-oxoglutarate dehydrogenase N-terminus LRO55_RS03925 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LRO55_RS03925 PF00364 Biotin-requiring enzyme LRO55_RS03925 PF02817 e3 binding domain LRO55_RS03930 PF07992 Pyridine nucleotide-disulphide oxidoreductase LRO55_RS03930 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LRO55_RS03935 PF00549 CoA-ligase LRO55_RS03935 PF08442 ATP-grasp domain LRO55_RS03940 PF02629 CoA binding domain LRO55_RS03940 PF00549 CoA-ligase LRO55_RS03955 PF00579 tRNA synthetases class I (W and Y) LRO55_RS03960 PF05661 Protein of unknown function (DUF808) LRO55_RS03965 PF04228 Putative neutral zinc metallopeptidase LRO55_RS03970 PF00999 Sodium/hydrogen exchanger family LRO55_RS03985 PF09587 Bacterial capsule synthesis protein PGA_cap LRO55_RS03995 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LRO55_RS04000 PF00582 Universal stress protein family LRO55_RS04005 PF00132 Bacterial transferase hexapeptide (six repeats) LRO55_RS04010 PF01272 Transcription elongation factor, GreA/GreB, C-term LRO55_RS04010 PF03449 Transcription elongation factor, N-terminal LRO55_RS04015 PF02142 MGS-like domain LRO55_RS04015 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LRO55_RS04015 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LRO55_RS04020 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LRO55_RS04020 PF00117 Glutamine amidotransferase class-I LRO55_RS04040 PF01985 CRS1 / YhbY (CRM) domain LRO55_RS04045 PF01728 FtsJ-like methyltransferase LRO55_RS04050 PF00004 ATPase family associated with various cellular activities (AAA) LRO55_RS04050 PF17862 AAA+ lid domain LRO55_RS04050 PF06480 FtsH Extracellular LRO55_RS04050 PF01434 Peptidase family M41 LRO55_RS04055 PF00809 Pterin binding enzyme LRO55_RS04075 PF16655 PhoD-like phosphatase, N-terminal domain LRO55_RS04075 PF09423 PhoD-like phosphatase LRO55_RS04090 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LRO55_RS04090 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LRO55_RS04105 PF00083 Sugar (and other) transporter LRO55_RS04110 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LRO55_RS04110 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LRO55_RS04115 PF01266 FAD dependent oxidoreductase LRO55_RS04115 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LRO55_RS04120 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain LRO55_RS04120 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain LRO55_RS04125 PF00781 Diacylglycerol kinase catalytic domain LRO55_RS04130 PF00149 Calcineurin-like phosphoesterase LRO55_RS04140 PF00166 Chaperonin 10 Kd subunit LRO55_RS04145 PF00118 TCP-1/cpn60 chaperonin family LRO55_RS04150 PF01219 Prokaryotic diacylglycerol kinase LRO55_RS04155 PF00753 Metallo-beta-lactamase superfamily LRO55_RS04160 PF03009 Glycerophosphoryl diester phosphodiesterase family LRO55_RS04165 PF00873 AcrB/AcrD/AcrF family LRO55_RS04175 PF01435 Peptidase family M48 LRO55_RS04180 PF01464 Transglycosylase SLT domain LRO55_RS04185 PF01171 PP-loop family LRO55_RS04195 PF01464 Transglycosylase SLT domain LRO55_RS04195 PF00497 Bacterial extracellular solute-binding proteins, family 3 LRO55_RS04200 PF01272 Transcription elongation factor, GreA/GreB, C-term LRO55_RS04200 PF03449 Transcription elongation factor, N-terminal LRO55_RS04220 PF03466 LysR substrate binding domain LRO55_RS04220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS04225 PF00668 Condensation domain LRO55_RS04225 PF13193 AMP-binding enzyme C-terminal domain LRO55_RS04225 PF00501 AMP-binding enzyme LRO55_RS04225 PF00550 Phosphopantetheine attachment site LRO55_RS04225 PF00975 Thioesterase domain LRO55_RS04230 PF03180 NLPA lipoprotein LRO55_RS04240 PF13411 MerR HTH family regulatory protein LRO55_RS04300 PF00881 Nitroreductase family LRO55_RS04315 PF02595 Glycerate kinase family LRO55_RS04325 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LRO55_RS04325 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LRO55_RS04325 PF11890 Domain of unknown function (DUF3410) LRO55_RS04330 PF00152 tRNA synthetases class II (D, K and N) LRO55_RS04340 PF18073 Rubredoxin metal binding domain LRO55_RS04345 PF01235 Sodium:alanine symporter family LRO55_RS04350 PF00324 Amino acid permease LRO55_RS04360 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LRO55_RS04360 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LRO55_RS04365 PF01678 Diaminopimelate epimerase LRO55_RS04370 PF03747 ADP-ribosylglycohydrolase LRO55_RS04380 PF01810 LysE type translocator LRO55_RS04385 PF00589 Phage integrase family LRO55_RS04385 PF02899 Phage integrase, N-terminal SAM-like domain LRO55_RS04395 PF01012 Electron transfer flavoprotein domain LRO55_RS04400 PF01012 Electron transfer flavoprotein domain LRO55_RS04400 PF00766 Electron transfer flavoprotein FAD-binding domain LRO55_RS04410 PF00753 Metallo-beta-lactamase superfamily LRO55_RS04410 PF16123 Hydroxyacylglutathione hydrolase C-terminus LRO55_RS04415 PF00521 DNA gyrase/topoisomerase IV, subunit A LRO55_RS04415 PF03989 DNA gyrase C-terminal domain, beta-propeller LRO55_RS04430 PF13533 Biotin-lipoyl like LRO55_RS04440 PF00266 Aminotransferase class-V LRO55_RS04455 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 LRO55_RS04460 PF00892 EamA-like transporter family LRO55_RS04470 PF12704 MacB-like periplasmic core domain LRO55_RS04470 PF02687 FtsX-like permease family LRO55_RS04475 PF00005 ABC transporter LRO55_RS04480 PF00753 Metallo-beta-lactamase superfamily LRO55_RS04480 PF03772 Competence protein LRO55_RS04480 PF13567 Domain of unknown function (DUF4131) LRO55_RS04490 PF01343 Peptidase family S49 LRO55_RS04490 PF06965 Na+/H+ antiporter 1 LRO55_RS04500 PF00551 Formyl transferase LRO55_RS04505 PF00586 AIR synthase related protein, N-terminal domain LRO55_RS04505 PF02769 AIR synthase related protein, C-terminal domain LRO55_RS04510 PF01594 AI-2E family transporter LRO55_RS04515 PF11638 DnaA N-terminal domain LRO55_RS04515 PF00308 Bacterial dnaA protein LRO55_RS04515 PF08299 Bacterial dnaA protein helix-turn-helix LRO55_RS04545 PF00588 SpoU rRNA Methylase family LRO55_RS04545 PF08032 RNA 2'-O ribose methyltransferase substrate binding LRO55_RS04550 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain LRO55_RS04560 PF00691 OmpA family LRO55_RS04565 PF04052 TolB amino-terminal domain LRO55_RS04565 PF07676 WD40-like Beta Propeller Repeat LRO55_RS04575 PF02472 Biopolymer transport protein ExbD/TolR LRO55_RS04580 PF01618 MotA/TolQ/ExbB proton channel family LRO55_RS04585 PF03061 Thioesterase superfamily LRO55_RS04590 PF01546 Peptidase family M20/M25/M40 LRO55_RS04590 PF07687 Peptidase dimerisation domain LRO55_RS04595 PF05496 Holliday junction DNA helicase RuvB P-loop domain LRO55_RS04595 PF05491 RuvB C-terminal winged helix domain LRO55_RS04595 PF17864 RuvB AAA lid domain LRO55_RS04600 PF01330 RuvA N terminal domain LRO55_RS04600 PF07499 RuvA, C-terminal domain LRO55_RS04605 PF01966 HD domain LRO55_RS04610 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LRO55_RS04610 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal LRO55_RS04610 PF02769 AIR synthase related protein, C-terminal domain LRO55_RS04615 PF07690 Major Facilitator Superfamily LRO55_RS04620 PF01784 NIF3 (NGG1p interacting factor 3) LRO55_RS04625 PF00378 Enoyl-CoA hydratase/isomerase LRO55_RS04630 PF01467 Cytidylyltransferase-like LRO55_RS04630 PF00293 NUDIX domain LRO55_RS04645 PF00578 AhpC/TSA family LRO55_RS04660 PF06508 Queuosine biosynthesis protein QueC LRO55_RS04665 PF04055 Radical SAM superfamily LRO55_RS04670 PF00132 Bacterial transferase hexapeptide (six repeats) LRO55_RS04670 PF14602 Hexapeptide repeat of succinyl-transferase LRO55_RS04670 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal LRO55_RS04680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS04680 PF03466 LysR substrate binding domain LRO55_RS04685 PF00005 ABC transporter LRO55_RS04685 PF12857 TOBE-like domain LRO55_RS04690 PF00528 Binding-protein-dependent transport system inner membrane component LRO55_RS04695 PF00528 Binding-protein-dependent transport system inner membrane component LRO55_RS04710 PF01063 Amino-transferase class IV LRO55_RS04715 PF02618 YceG-like family LRO55_RS04720 PF02223 Thymidylate kinase LRO55_RS04730 PF00890 FAD binding domain LRO55_RS04730 PF02910 Fumarate reductase flavoprotein C-term LRO55_RS04735 PF13180 PDZ domain LRO55_RS04745 PF13302 Acetyltransferase (GNAT) domain LRO55_RS04750 PF00679 Elongation factor G C-terminus LRO55_RS04750 PF00009 Elongation factor Tu GTP binding domain LRO55_RS04750 PF03144 Elongation factor Tu domain 2 LRO55_RS04750 PF06421 GTP-binding protein LepA C-terminus LRO55_RS04755 PF10502 Signal peptidase, peptidase S26 LRO55_RS04765 PF00035 Double-stranded RNA binding motif LRO55_RS04765 PF14622 Ribonuclease-III-like LRO55_RS04770 PF07650 KH domain LRO55_RS04770 PF01926 50S ribosome-binding GTPase LRO55_RS04780 PF02565 Recombination protein O C terminal LRO55_RS04780 PF11967 Recombination protein O N terminal LRO55_RS04785 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LRO55_RS04790 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) LRO55_RS04795 PF00106 short chain dehydrogenase LRO55_RS04825 PF00012 Hsp70 protein LRO55_RS04835 PF00155 Aminotransferase class I and II LRO55_RS04855 PF00271 Helicase conserved C-terminal domain LRO55_RS04855 PF04851 Type III restriction enzyme, res subunit LRO55_RS04855 PF02151 UvrB/uvrC motif LRO55_RS04855 PF12344 Ultra-violet resistance protein B LRO55_RS04855 PF17757 UvrB interaction domain LRO55_RS04870 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LRO55_RS04870 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LRO55_RS04885 PF01018 GTP1/OBG LRO55_RS04885 PF01926 50S ribosome-binding GTPase LRO55_RS04890 PF00696 Amino acid kinase family LRO55_RS04890 PF01472 PUA domain LRO55_RS04900 PF07759 Protein of unknown function (DUF1615) LRO55_RS04905 PF01207 Dihydrouridine synthase (Dus) LRO55_RS04910 PF03060 Nitronate monooxygenase LRO55_RS04925 PF02350 UDP-N-acetylglucosamine 2-epimerase LRO55_RS04955 PF00875 DNA photolyase LRO55_RS04955 PF03441 FAD binding domain of DNA photolyase LRO55_RS04960 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LRO55_RS04965 PF07992 Pyridine nucleotide-disulphide oxidoreductase LRO55_RS04970 PF07943 Penicillin-binding protein 5, C-terminal domain LRO55_RS04970 PF00768 D-alanyl-D-alanine carboxypeptidase LRO55_RS04980 PF03971 Monomeric isocitrate dehydrogenase LRO55_RS04985 PF00849 RNA pseudouridylate synthase LRO55_RS04990 PF00180 Isocitrate/isopropylmalate dehydrogenase LRO55_RS05050 PF06779 Uncharacterised MFS-type transporter YbfB LRO55_RS05055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS05055 PF03466 LysR substrate binding domain LRO55_RS05060 PF00375 Sodium:dicarboxylate symporter family LRO55_RS05065 PF02567 Phenazine biosynthesis-like protein LRO55_RS05070 PF00675 Insulinase (Peptidase family M16) LRO55_RS05070 PF05193 Peptidase M16 inactive domain LRO55_RS05095 PF02581 Thiamine monophosphate synthase LRO55_RS05100 PF00202 Aminotransferase class-III LRO55_RS05110 PF00849 RNA pseudouridylate synthase LRO55_RS05115 PF12137 RNA polymerase recycling family C-terminal LRO55_RS05115 PF00176 SNF2 family N-terminal domain LRO55_RS05115 PF18339 RapA N-terminal Tudor like domain 1 LRO55_RS05115 PF18337 RapA N-terminal Tudor like domain LRO55_RS05115 PF00271 Helicase conserved C-terminal domain LRO55_RS05125 PF00440 Bacterial regulatory proteins, tetR family LRO55_RS05130 PF00970 Oxidoreductase FAD-binding domain LRO55_RS05130 PF00111 2Fe-2S iron-sulfur cluster binding domain LRO55_RS05130 PF00175 Oxidoreductase NAD-binding domain LRO55_RS05135 PF00487 Fatty acid desaturase LRO55_RS05155 PF00202 Aminotransferase class-III LRO55_RS05160 PF00282 Pyridoxal-dependent decarboxylase conserved domain LRO55_RS05165 PF00171 Aldehyde dehydrogenase family LRO55_RS05170 PF01037 Lrp/AsnC ligand binding domain LRO55_RS05175 PF00205 Thiamine pyrophosphate enzyme, central domain LRO55_RS05175 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LRO55_RS05175 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LRO55_RS05180 PF00324 Amino acid permease LRO55_RS05185 PF12849 PBP superfamily domain LRO55_RS05190 PF00528 Binding-protein-dependent transport system inner membrane component LRO55_RS05195 PF00528 Binding-protein-dependent transport system inner membrane component LRO55_RS05200 PF00005 ABC transporter LRO55_RS05205 PF01343 Peptidase family S49 LRO55_RS05205 PF08496 Peptidase family S49 N-terminal LRO55_RS05220 PF08328 Adenylosuccinate lyase C-terminal LRO55_RS05220 PF00206 Lyase LRO55_RS05225 PF04356 Protein of unknown function (DUF489) LRO55_RS05240 PF00132 Bacterial transferase hexapeptide (six repeats) LRO55_RS05245 PF07943 Penicillin-binding protein 5, C-terminal domain LRO55_RS05245 PF00768 D-alanyl-D-alanine carboxypeptidase LRO55_RS05260 PF01975 Survival protein SurE LRO55_RS05265 PF01551 Peptidase family M23 LRO55_RS05265 PF01476 LysM domain LRO55_RS05270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS05270 PF03466 LysR substrate binding domain LRO55_RS05275 PF13654 AAA domain LRO55_RS05275 PF05362 Lon protease (S16) C-terminal proteolytic domain LRO55_RS05280 PF07690 Major Facilitator Superfamily LRO55_RS05285 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LRO55_RS05290 PF13593 SBF-like CPA transporter family (DUF4137) LRO55_RS05295 PF01197 Ribosomal protein L31 LRO55_RS05310 PF04055 Radical SAM superfamily LRO55_RS05315 PF01132 Elongation factor P (EF-P) OB domain LRO55_RS05315 PF08207 Elongation factor P (EF-P) KOW-like domain LRO55_RS05315 PF09285 Elongation factor P, C-terminal LRO55_RS05320 PF13722 5TM C-terminal transporter carbon starvation CstA LRO55_RS05320 PF02554 Carbon starvation protein CstA LRO55_RS05325 PF04328 Selenoprotein, putative LRO55_RS05345 PF00313 'Cold-shock' DNA-binding domain LRO55_RS05365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS05365 PF03466 LysR substrate binding domain LRO55_RS05385 PF00883 Cytosol aminopeptidase family, catalytic domain LRO55_RS05385 PF02789 Cytosol aminopeptidase family, N-terminal domain LRO55_RS05390 PF02423 Ornithine cyclodeaminase/mu-crystallin family LRO55_RS05395 PF00291 Pyridoxal-phosphate dependent enzyme LRO55_RS05400 PF13309 HTH domain LRO55_RS05400 PF08348 YheO-like PAS domain LRO55_RS05410 PF02678 Pirin LRO55_RS05410 PF17954 Quercetinase C-terminal cupin domain LRO55_RS05420 PF01208 Uroporphyrinogen decarboxylase (URO-D) LRO55_RS05425 PF05675 Protein of unknown function (DUF817) LRO55_RS05440 PF00144 Beta-lactamase LRO55_RS05445 PF01227 GTP cyclohydrolase I LRO55_RS05450 PF00111 2Fe-2S iron-sulfur cluster binding domain LRO55_RS05450 PF01799 [2Fe-2S] binding domain LRO55_RS05455 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LRO55_RS05455 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LRO55_RS05470 PF00218 Indole-3-glycerol phosphate synthase LRO55_RS05475 PF02885 Glycosyl transferase family, helical bundle domain LRO55_RS05475 PF00591 Glycosyl transferase family, a/b domain LRO55_RS05480 PF07715 TonB-dependent Receptor Plug Domain LRO55_RS05480 PF00593 TonB dependent receptor LRO55_RS05485 PF01433 Peptidase family M1 domain LRO55_RS05485 PF11838 ERAP1-like C-terminal domain LRO55_RS05490 PF00117 Glutamine amidotransferase class-I LRO55_RS05505 PF00854 POT family LRO55_RS05510 PF03951 Glutamine synthetase, beta-Grasp domain LRO55_RS05510 PF00120 Glutamine synthetase, catalytic domain LRO55_RS05515 PF04345 Chorismate lyase LRO55_RS05520 PF01040 UbiA prenyltransferase family LRO55_RS05555 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LRO55_RS05555 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LRO55_RS05560 PF01784 NIF3 (NGG1p interacting factor 3) LRO55_RS05565 PF13180 PDZ domain LRO55_RS05570 PF01743 Poly A polymerase head domain LRO55_RS05570 PF12627 Probable RNA and SrmB- binding site of polymerase A LRO55_RS05575 PF00390 Malic enzyme, N-terminal domain LRO55_RS05575 PF03949 Malic enzyme, NAD binding domain LRO55_RS05575 PF01515 Phosphate acetyl/butaryl transferase LRO55_RS05580 PF00990 Diguanylate cyclase, GGDEF domain LRO55_RS05580 PF03707 Bacterial signalling protein N terminal repeat LRO55_RS05580 PF00563 EAL domain LRO55_RS05585 PF04452 RNA methyltransferase LRO55_RS05590 PF02219 Methylenetetrahydrofolate reductase LRO55_RS05595 PF05221 S-adenosyl-L-homocysteine hydrolase LRO55_RS05595 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain LRO55_RS05610 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LRO55_RS05610 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LRO55_RS05610 PF09317 Domain of unknown function (DUF1974) LRO55_RS05615 PF04055 Radical SAM superfamily LRO55_RS05620 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LRO55_RS05620 PF07992 Pyridine nucleotide-disulphide oxidoreductase LRO55_RS05630 PF07690 Major Facilitator Superfamily LRO55_RS05640 PF00557 Metallopeptidase family M24 LRO55_RS05645 PF00318 Ribosomal protein S2 LRO55_RS05650 PF00889 Elongation factor TS LRO55_RS05660 PF12833 Helix-turn-helix domain LRO55_RS05680 PF03330 Lytic transglycolase LRO55_RS05680 PF05036 Sporulation related domain LRO55_RS05685 PF13406 Transglycosylase SLT domain LRO55_RS05690 PF01098 Cell cycle protein LRO55_RS05700 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term LRO55_RS05700 PF14489 QueF-like protein LRO55_RS05705 PF01061 ABC-2 type transporter LRO55_RS05710 PF00005 ABC transporter LRO55_RS05740 PF00464 Serine hydroxymethyltransferase LRO55_RS05745 PF02321 Outer membrane efflux protein LRO55_RS05750 PF00873 AcrB/AcrD/AcrF family LRO55_RS05755 PF13533 Biotin-lipoyl like LRO55_RS05760 PF03466 LysR substrate binding domain LRO55_RS05760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS05765 PF00497 Bacterial extracellular solute-binding proteins, family 3 LRO55_RS05770 PF00528 Binding-protein-dependent transport system inner membrane component LRO55_RS05775 PF00528 Binding-protein-dependent transport system inner membrane component LRO55_RS05780 PF00005 ABC transporter LRO55_RS05785 PF00893 Small Multidrug Resistance protein LRO55_RS05790 PF00155 Aminotransferase class I and II LRO55_RS05790 PF00392 Bacterial regulatory proteins, gntR family LRO55_RS05795 PF02567 Phenazine biosynthesis-like protein LRO55_RS05800 PF00175 Oxidoreductase NAD-binding domain LRO55_RS05800 PF00970 Oxidoreductase FAD-binding domain LRO55_RS05805 PF01980 tRNA-methyltransferase O LRO55_RS05805 PF18389 TrmO C-terminal domain LRO55_RS05815 PF00437 Type II/IV secretion system protein LRO55_RS05815 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LRO55_RS05825 PF00486 Transcriptional regulatory protein, C terminal LRO55_RS05825 PF00072 Response regulator receiver domain LRO55_RS05830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRO55_RS05830 PF08521 Two-component sensor kinase N-terminal LRO55_RS05830 PF00512 His Kinase A (phospho-acceptor) domain LRO55_RS05840 PF00293 NUDIX domain LRO55_RS05850 PF00905 Penicillin binding protein transpeptidase domain LRO55_RS05850 PF14814 Bifunctional transglycosylase second domain LRO55_RS05850 PF00912 Transglycosylase LRO55_RS05855 PF01513 ATP-NAD kinase LRO55_RS05860 PF07023 Protein of unknown function (DUF1315) LRO55_RS05870 PF02885 Glycosyl transferase family, helical bundle domain LRO55_RS05870 PF00591 Glycosyl transferase family, a/b domain LRO55_RS05875 PF00375 Sodium:dicarboxylate symporter family LRO55_RS05880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LRO55_RS05880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LRO55_RS05880 PF02770 Acyl-CoA dehydrogenase, middle domain LRO55_RS05890 PF00756 Putative esterase LRO55_RS05895 PF01842 ACT domain LRO55_RS05895 PF01817 Chorismate mutase type II LRO55_RS05895 PF00800 Prephenate dehydratase LRO55_RS05900 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LRO55_RS05910 PF07687 Peptidase dimerisation domain LRO55_RS05910 PF01546 Peptidase family M20/M25/M40 LRO55_RS05915 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain LRO55_RS05915 PF01137 RNA 3'-terminal phosphate cyclase LRO55_RS05930 PF01139 tRNA-splicing ligase RtcB LRO55_RS05935 PF00753 Metallo-beta-lactamase superfamily LRO55_RS05940 PF06956 Regulator of RNA terminal phosphate cyclase LRO55_RS05940 PF00158 Sigma-54 interaction domain LRO55_RS05950 PF03883 Peroxide stress protein YaaA LRO55_RS05960 PF05690 Thiazole biosynthesis protein ThiG LRO55_RS05970 PF04241 Protein of unknown function (DUF423) LRO55_RS05975 PF04542 Sigma-70 region 2 LRO55_RS05975 PF04545 Sigma-70, region 4 LRO55_RS05975 PF00140 Sigma-70 factor, region 1.2 LRO55_RS05990 PF00313 'Cold-shock' DNA-binding domain LRO55_RS05995 PF00271 Helicase conserved C-terminal domain LRO55_RS05995 PF00270 DEAD/DEAH box helicase LRO55_RS06005 PF00881 Nitroreductase family LRO55_RS06010 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LRO55_RS06010 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LRO55_RS06030 PF01180 Dihydroorotate dehydrogenase LRO55_RS06035 PF02674 Colicin V production protein LRO55_RS06040 PF00156 Phosphoribosyl transferase domain LRO55_RS06055 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LRO55_RS06055 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LRO55_RS06060 PF01435 Peptidase family M48 LRO55_RS06065 PF09424 Yqey-like protein LRO55_RS06070 PF01165 Ribosomal protein S21 LRO55_RS06075 PF00814 Glycoprotease family LRO55_RS06095 PF00069 Protein kinase domain LRO55_RS06120 PF00313 'Cold-shock' DNA-binding domain LRO55_RS06145 PF01554 MatE LRO55_RS06150 PF02321 Outer membrane efflux protein LRO55_RS06155 PF13977 BetI-type transcriptional repressor, C-terminal LRO55_RS06155 PF00440 Bacterial regulatory proteins, tetR family LRO55_RS06165 PF00873 AcrB/AcrD/AcrF family LRO55_RS06170 PF00106 short chain dehydrogenase LRO55_RS06175 PF01638 HxlR-like helix-turn-helix LRO55_RS06195 PF00440 Bacterial regulatory proteins, tetR family LRO55_RS06200 PF12833 Helix-turn-helix domain LRO55_RS06200 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LRO55_RS06205 PF00487 Fatty acid desaturase LRO55_RS06210 PF00561 alpha/beta hydrolase fold LRO55_RS06215 PF03616 Sodium/glutamate symporter LRO55_RS06220 PF02254 TrkA-N domain LRO55_RS06220 PF00999 Sodium/hydrogen exchanger family LRO55_RS06225 PF00106 short chain dehydrogenase LRO55_RS06235 PF00083 Sugar (and other) transporter LRO55_RS06235 PF08946 Osmosensory transporter coiled coil LRO55_RS06265 PF03466 LysR substrate binding domain LRO55_RS06265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS06275 PF04403 Paraquat-inducible protein A LRO55_RS06280 PF02470 MlaD protein LRO55_RS06290 PF00576 HIUase/Transthyretin family LRO55_RS06300 PF00072 Response regulator receiver domain LRO55_RS06300 PF00486 Transcriptional regulatory protein, C terminal LRO55_RS06305 PF00672 HAMP domain LRO55_RS06305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRO55_RS06305 PF00512 His Kinase A (phospho-acceptor) domain LRO55_RS06315 PF00293 NUDIX domain LRO55_RS06320 PF01177 Asp/Glu/Hydantoin racemase LRO55_RS06325 PF08240 Alcohol dehydrogenase GroES-like domain LRO55_RS06325 PF00107 Zinc-binding dehydrogenase LRO55_RS06330 PF02668 Taurine catabolism dioxygenase TauD, TfdA family LRO55_RS06335 PF05853 beta-keto acid cleavage enzyme LRO55_RS06340 PF07690 Major Facilitator Superfamily LRO55_RS06355 PF03601 Conserved hypothetical protein 698 LRO55_RS06380 PF07995 Glucose / Sorbosone dehydrogenase LRO55_RS06385 PF01494 FAD binding domain LRO55_RS06390 PF07690 Major Facilitator Superfamily LRO55_RS06395 PF03466 LysR substrate binding domain LRO55_RS06395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS06405 PF00043 Glutathione S-transferase, C-terminal domain LRO55_RS06405 PF02798 Glutathione S-transferase, N-terminal domain LRO55_RS06420 PF00375 Sodium:dicarboxylate symporter family LRO55_RS06430 PF00753 Metallo-beta-lactamase superfamily LRO55_RS06430 PF16123 Hydroxyacylglutathione hydrolase C-terminus LRO55_RS06435 PF00528 Binding-protein-dependent transport system inner membrane component LRO55_RS06440 PF00005 ABC transporter LRO55_RS06440 PF09383 NIL domain LRO55_RS06445 PF03180 NLPA lipoprotein LRO55_RS06450 PF02844 Phosphoribosylglycinamide synthetase, N domain LRO55_RS06450 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LRO55_RS06450 PF02843 Phosphoribosylglycinamide synthetase, C domain LRO55_RS06455 PF02142 MGS-like domain LRO55_RS06455 PF01808 AICARFT/IMPCHase bienzyme LRO55_RS06460 PF02954 Bacterial regulatory protein, Fis family LRO55_RS06480 PF13932 GidA associated domain LRO55_RS06480 PF01134 Glucose inhibited division protein A LRO55_RS06490 PF14403 Circularly permuted ATP-grasp type 2 LRO55_RS06500 PF08379 Bacterial transglutaminase-like N-terminal region LRO55_RS06500 PF01841 Transglutaminase-like superfamily LRO55_RS06510 PF01168 Alanine racemase, N-terminal domain LRO55_RS06510 PF00842 Alanine racemase, C-terminal domain LRO55_RS06515 PF03796 DnaB-like helicase C terminal domain LRO55_RS06515 PF00772 DnaB-like helicase N terminal domain LRO55_RS06520 PF01281 Ribosomal protein L9, N-terminal domain LRO55_RS06520 PF03948 Ribosomal protein L9, C-terminal domain LRO55_RS06525 PF01084 Ribosomal protein S18 LRO55_RS06530 PF01250 Ribosomal protein S6 LRO55_RS06535 PF01040 UbiA prenyltransferase family LRO55_RS06540 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LRO55_RS06545 PF00510 Cytochrome c oxidase subunit III LRO55_RS06550 PF00115 Cytochrome C and Quinol oxidase polypeptide I LRO55_RS06555 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LRO55_RS06555 PF06481 COX Aromatic Rich Motif LRO55_RS06565 PF00391 PEP-utilising enzyme, mobile domain LRO55_RS06565 PF02896 PEP-utilising enzyme, TIM barrel domain LRO55_RS06565 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LRO55_RS06570 PF03618 Kinase/pyrophosphorylase LRO55_RS06580 PF14883 Hypothetical glycosyl hydrolase family 13 LRO55_RS06580 PF01522 Polysaccharide deacetylase LRO55_RS06585 PF00535 Glycosyl transferase family 2 LRO55_RS06590 PF13994 PgaD-like protein LRO55_RS06600 PF00296 Luciferase-like monooxygenase LRO55_RS06615 PF03466 LysR substrate binding domain LRO55_RS06615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS06625 PF03462 PCRF domain LRO55_RS06625 PF00472 RF-1 domain LRO55_RS06630 PF13847 Methyltransferase domain LRO55_RS06630 PF17827 PrmC N-terminal domain LRO55_RS06635 PF00528 Binding-protein-dependent transport system inner membrane component LRO55_RS06640 PF09084 NMT1/THI5 like LRO55_RS06645 PF12833 Helix-turn-helix domain LRO55_RS06650 PF00106 short chain dehydrogenase LRO55_RS06655 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LRO55_RS06655 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LRO55_RS06655 PF02770 Acyl-CoA dehydrogenase, middle domain LRO55_RS06660 PF01613 Flavin reductase like domain LRO55_RS06665 PF00899 ThiF family LRO55_RS06670 PF03109 ABC1 family LRO55_RS06675 PF02152 Dihydroneopterin aldolase LRO55_RS06685 PF03814 Potassium-transporting ATPase A subunit LRO55_RS06695 PF02669 K+-transporting ATPase, c chain LRO55_RS06700 PF13493 Domain of unknown function (DUF4118) LRO55_RS06700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRO55_RS06700 PF00512 His Kinase A (phospho-acceptor) domain LRO55_RS06700 PF02702 Osmosensitive K+ channel His kinase sensor domain LRO55_RS06705 PF00486 Transcriptional regulatory protein, C terminal LRO55_RS06705 PF00072 Response regulator receiver domain LRO55_RS06710 PF00120 Glutamine synthetase, catalytic domain LRO55_RS06720 PF03232 Ubiquinone biosynthesis protein COQ7 LRO55_RS06725 PF07690 Major Facilitator Superfamily LRO55_RS06730 PF01103 Surface antigen LRO55_RS06730 PF07244 Surface antigen variable number repeat LRO55_RS06730 PF17243 POTRA domain TamA domain 1 LRO55_RS06740 PF10282 Lactonase, 7-bladed beta-propeller LRO55_RS06750 PF00330 Aconitase family (aconitate hydratase) LRO55_RS06750 PF06434 Aconitate hydratase 2 N-terminus LRO55_RS06750 PF11791 Aconitate B N-terminal domain LRO55_RS06760 PF00520 Ion transport protein LRO55_RS06760 PF00027 Cyclic nucleotide-binding domain LRO55_RS06765 PF07690 Major Facilitator Superfamily LRO55_RS06780 PF03466 LysR substrate binding domain LRO55_RS06780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS06785 PF04284 Protein of unknown function (DUF441) LRO55_RS06795 PF01479 S4 domain LRO55_RS06795 PF00849 RNA pseudouridylate synthase LRO55_RS06810 PF01479 S4 domain LRO55_RS06810 PF00849 RNA pseudouridylate synthase LRO55_RS06815 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LRO55_RS06820 PF01119 DNA mismatch repair protein, C-terminal domain LRO55_RS06820 PF08676 MutL C terminal dimerisation domain LRO55_RS06830 PF17209 Hfq protein LRO55_RS06840 PF00881 Nitroreductase family LRO55_RS06850 PF00149 Calcineurin-like phosphoesterase LRO55_RS06855 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LRO55_RS06860 PF00749 tRNA synthetases class I (E and Q), catalytic domain LRO55_RS06860 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LRO55_RS06865 PF00117 Glutamine amidotransferase class-I LRO55_RS06865 PF02540 NAD synthase LRO55_RS06865 PF00958 GMP synthase C terminal domain LRO55_RS06870 PF05985 Ethanolamine ammonia-lyase light chain (EutC) LRO55_RS06875 PF06751 Ethanolamine ammonia lyase large subunit (EutB) LRO55_RS06880 PF13520 Amino acid permease LRO55_RS06885 PF00171 Aldehyde dehydrogenase family LRO55_RS06900 PF00465 Iron-containing alcohol dehydrogenase LRO55_RS06905 PF14493 Helix-turn-helix domain LRO55_RS06905 PF05970 PIF1-like helicase LRO55_RS06915 PF02110 Hydroxyethylthiazole kinase family LRO55_RS06930 PF11940 Domain of unknown function (DUF3458) Ig-like fold LRO55_RS06930 PF17432 Domain of unknown function (DUF3458_C) ARM repeats LRO55_RS06930 PF01433 Peptidase family M1 domain LRO55_RS06945 PF00577 Outer membrane usher protein LRO55_RS06945 PF13954 PapC N-terminal domain LRO55_RS06945 PF13953 PapC C-terminal domain LRO55_RS06970 PF01817 Chorismate mutase type II LRO55_RS06975 PF01810 LysE type translocator LRO55_RS06995 PF00512 His Kinase A (phospho-acceptor) domain LRO55_RS06995 PF00672 HAMP domain LRO55_RS06995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRO55_RS07000 PF00486 Transcriptional regulatory protein, C terminal LRO55_RS07000 PF00072 Response regulator receiver domain LRO55_RS07025 PF00117 Glutamine amidotransferase class-I LRO55_RS07060 PF01638 HxlR-like helix-turn-helix LRO55_RS07080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS07080 PF03466 LysR substrate binding domain LRO55_RS07095 PF04076 Bacterial OB fold (BOF) protein LRO55_RS07110 PF04151 Bacterial pre-peptidase C-terminal domain LRO55_RS07115 PF12848 ABC transporter LRO55_RS07115 PF00005 ABC transporter LRO55_RS07120 PF00582 Universal stress protein family LRO55_RS07140 PF03594 Benzoate membrane transport protein LRO55_RS07145 PF01037 Lrp/AsnC ligand binding domain LRO55_RS07150 PF01810 LysE type translocator LRO55_RS07155 PF00923 Transaldolase/Fructose-6-phosphate aldolase LRO55_RS07160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS07160 PF03466 LysR substrate binding domain LRO55_RS07170 PF02803 Thiolase, C-terminal domain LRO55_RS07170 PF00108 Thiolase, N-terminal domain LRO55_RS07180 PF01575 MaoC like domain LRO55_RS07195 PF07690 Major Facilitator Superfamily LRO55_RS07210 PF12169 DNA polymerase III subunits gamma and tau domain III LRO55_RS07210 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding LRO55_RS07210 PF12170 DNA polymerase III tau subunit V interacting with alpha LRO55_RS07215 PF05506 Domain of unknown function (DUF756) LRO55_RS07215 PF04185 Phosphoesterase family LRO55_RS07220 PF03061 Thioesterase superfamily LRO55_RS07225 PF00465 Iron-containing alcohol dehydrogenase LRO55_RS07240 PF01757 Acyltransferase family LRO55_RS07245 PF01451 Low molecular weight phosphotyrosine protein phosphatase LRO55_RS07250 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LRO55_RS07250 PF01565 FAD binding domain LRO55_RS07275 PF01645 Conserved region in glutamate synthase LRO55_RS07295 PF00577 Outer membrane usher protein LRO55_RS07295 PF13954 PapC N-terminal domain LRO55_RS07295 PF13953 PapC C-terminal domain LRO55_RS07305 PF12832 MFS_1 like family LRO55_RS07315 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LRO55_RS07315 PF00289 Biotin carboxylase, N-terminal domain LRO55_RS07315 PF02785 Biotin carboxylase C-terminal domain LRO55_RS07320 PF00364 Biotin-requiring enzyme LRO55_RS07325 PF01220 Dehydroquinase class II LRO55_RS07330 PF13438 Domain of unknown function (DUF4113) LRO55_RS07330 PF00817 impB/mucB/samB family LRO55_RS07330 PF11799 impB/mucB/samB family C-terminal domain LRO55_RS07335 PF07715 TonB-dependent Receptor Plug Domain LRO55_RS07335 PF00593 TonB dependent receptor LRO55_RS07345 PF06276 Ferric iron reductase FhuF-like transporter LRO55_RS07345 PF04183 IucA / IucC family LRO55_RS07350 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) LRO55_RS07355 PF07690 Major Facilitator Superfamily LRO55_RS07365 PF06276 Ferric iron reductase FhuF-like transporter LRO55_RS07365 PF04183 IucA / IucC family LRO55_RS07385 PF07715 TonB-dependent Receptor Plug Domain LRO55_RS07385 PF00593 TonB dependent receptor LRO55_RS07395 PF00005 ABC transporter LRO55_RS07410 PF13806 Rieske-like [2Fe-2S] domain LRO55_RS07410 PF07992 Pyridine nucleotide-disulphide oxidoreductase LRO55_RS07410 PF18267 Rubredoxin NAD+ reductase C-terminal domain LRO55_RS07410 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LRO55_RS07410 PF04324 BFD-like [2Fe-2S] binding domain LRO55_RS07410 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LRO55_RS07415 PF04324 BFD-like [2Fe-2S] binding domain LRO55_RS07415 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LRO55_RS07415 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LRO55_RS07415 PF07992 Pyridine nucleotide-disulphide oxidoreductase LRO55_RS07415 PF18267 Rubredoxin NAD+ reductase C-terminal domain LRO55_RS07420 PF01568 Molydopterin dinucleotide binding domain LRO55_RS07420 PF00384 Molybdopterin oxidoreductase LRO55_RS07420 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LRO55_RS07420 PF04324 BFD-like [2Fe-2S] binding domain LRO55_RS07425 PF12804 MobA-like NTP transferase domain LRO55_RS07430 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LRO55_RS07430 PF00384 Molybdopterin oxidoreductase LRO55_RS07430 PF01568 Molydopterin dinucleotide binding domain LRO55_RS07435 PF06463 Molybdenum Cofactor Synthesis C LRO55_RS07435 PF04055 Radical SAM superfamily LRO55_RS07445 PF02391 MoaE protein LRO55_RS07450 PF01967 MoaC family LRO55_RS07450 PF00994 Probable molybdopterin binding domain LRO55_RS07455 PF03453 MoeA N-terminal region (domain I and II) LRO55_RS07455 PF03454 MoeA C-terminal region (domain IV) LRO55_RS07455 PF00994 Probable molybdopterin binding domain LRO55_RS07460 PF01638 HxlR-like helix-turn-helix LRO55_RS07465 PF00392 Bacterial regulatory proteins, gntR family LRO55_RS07465 PF00155 Aminotransferase class I and II LRO55_RS07470 PF00892 EamA-like transporter family LRO55_RS07490 PF02635 DsrE/DsrF-like family LRO55_RS07495 PF16363 GDP-mannose 4,6 dehydratase LRO55_RS07500 PF10415 Fumarase C C-terminus LRO55_RS07500 PF00206 Lyase LRO55_RS07515 PF00857 Isochorismatase family LRO55_RS07525 PF01266 FAD dependent oxidoreductase LRO55_RS07535 PF02542 YgbB family LRO55_RS07545 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LRO55_RS07545 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LRO55_RS07550 PF00440 Bacterial regulatory proteins, tetR family LRO55_RS07555 PF02954 Bacterial regulatory protein, Fis family LRO55_RS07555 PF00072 Response regulator receiver domain LRO55_RS07555 PF00158 Sigma-54 interaction domain LRO55_RS07560 PF00989 PAS fold LRO55_RS07560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRO55_RS07560 PF00512 His Kinase A (phospho-acceptor) domain LRO55_RS07570 PF00919 Uncharacterized protein family UPF0004 LRO55_RS07570 PF18693 TRAM domain LRO55_RS07570 PF04055 Radical SAM superfamily LRO55_RS07575 PF00696 Amino acid kinase family LRO55_RS07580 PF01765 Ribosome recycling factor LRO55_RS07585 PF01255 Putative undecaprenyl diphosphate synthase LRO55_RS07595 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LRO55_RS07595 PF13288 DXP reductoisomerase C-terminal domain LRO55_RS07595 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LRO55_RS07600 PF17820 PDZ domain LRO55_RS07600 PF13180 PDZ domain LRO55_RS07600 PF02163 Peptidase family M50 LRO55_RS07605 PF07244 Surface antigen variable number repeat LRO55_RS07605 PF01103 Surface antigen LRO55_RS07615 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LRO55_RS07615 PF00132 Bacterial transferase hexapeptide (six repeats) LRO55_RS07620 PF07977 FabA-like domain LRO55_RS07625 PF00132 Bacterial transferase hexapeptide (six repeats) LRO55_RS07625 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LRO55_RS07640 PF02631 RecX family LRO55_RS07645 PF00154 recA bacterial DNA recombination protein LRO55_RS07650 PF01479 S4 domain LRO55_RS07655 PF13419 Haloacid dehalogenase-like hydrolase LRO55_RS07670 PF01037 Lrp/AsnC ligand binding domain LRO55_RS07675 PF00266 Aminotransferase class-V LRO55_RS07680 PF00324 Amino acid permease LRO55_RS07700 PF00082 Subtilase family LRO55_RS07700 PF05922 Peptidase inhibitor I9 LRO55_RS07705 PF00916 Sulfate permease family LRO55_RS07705 PF01740 STAS domain LRO55_RS07710 PF07995 Glucose / Sorbosone dehydrogenase LRO55_RS07720 PF00990 Diguanylate cyclase, GGDEF domain LRO55_RS07720 PF00563 EAL domain LRO55_RS07720 PF03707 Bacterial signalling protein N terminal repeat LRO55_RS07755 PF02378 Phosphotransferase system, EIIC LRO55_RS07755 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LRO55_RS07760 PF00294 pfkB family carbohydrate kinase LRO55_RS07765 PF00381 PTS HPr component phosphorylation site LRO55_RS07765 PF02896 PEP-utilising enzyme, TIM barrel domain LRO55_RS07765 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LRO55_RS07765 PF05524 PEP-utilising enzyme, N-terminal LRO55_RS07765 PF00391 PEP-utilising enzyme, mobile domain LRO55_RS07785 PF03928 Haem-degrading LRO55_RS07790 PF05525 Branched-chain amino acid transport protein LRO55_RS07795 PF00557 Metallopeptidase family M24 LRO55_RS07800 PF03466 LysR substrate binding domain LRO55_RS07800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS07810 PF00462 Glutaredoxin LRO55_RS07815 PF00202 Aminotransferase class-III LRO55_RS07820 PF01380 SIS domain LRO55_RS07820 PF00571 CBS domain LRO55_RS07845 PF00448 SRP54-type protein, GTPase domain LRO55_RS07845 PF02881 SRP54-type protein, helical bundle domain LRO55_RS07855 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) LRO55_RS07865 PF08173 Membrane bound YbgT-like protein LRO55_RS07870 PF02322 Cytochrome bd terminal oxidase subunit II LRO55_RS07875 PF01654 Cytochrome bd terminal oxidase subunit I LRO55_RS07885 PF07290 Protein of unknown function (DUF1449) LRO55_RS07895 PF00294 pfkB family carbohydrate kinase LRO55_RS07900 PF07715 TonB-dependent Receptor Plug Domain LRO55_RS07900 PF00593 TonB dependent receptor LRO55_RS07905 PF05193 Peptidase M16 inactive domain LRO55_RS07905 PF08367 Peptidase M16C associated LRO55_RS07905 PF00675 Insulinase (Peptidase family M16) LRO55_RS07910 PF02253 Phospholipase A1 LRO55_RS07915 PF02386 Cation transport protein LRO55_RS07920 PF02254 TrkA-N domain LRO55_RS07920 PF02080 TrkA-C domain LRO55_RS07925 PF00585 C-terminal regulatory domain of Threonine dehydratase LRO55_RS07925 PF00291 Pyridoxal-phosphate dependent enzyme LRO55_RS07930 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LRO55_RS07945 PF02774 Semialdehyde dehydrogenase, dimerisation domain LRO55_RS07945 PF01118 Semialdehyde dehydrogenase, NAD binding domain LRO55_RS07955 PF02617 ATP-dependent Clp protease adaptor protein ClpS LRO55_RS07960 PF07724 AAA domain (Cdc48 subfamily) LRO55_RS07960 PF00004 ATPase family associated with various cellular activities (AAA) LRO55_RS07960 PF17871 AAA lid domain LRO55_RS07960 PF02861 Clp amino terminal domain, pathogenicity island component LRO55_RS07960 PF10431 C-terminal, D2-small domain, of ClpB protein LRO55_RS07965 PF02694 Uncharacterised BCR, YnfA/UPF0060 family LRO55_RS07970 PF00793 DAHP synthetase I family LRO55_RS07985 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LRO55_RS07985 PF07992 Pyridine nucleotide-disulphide oxidoreductase LRO55_RS08015 PF06418 CTP synthase N-terminus LRO55_RS08015 PF00117 Glutamine amidotransferase class-I LRO55_RS08020 PF00793 DAHP synthetase I family LRO55_RS08025 PF00113 Enolase, C-terminal TIM barrel domain LRO55_RS08025 PF03952 Enolase, N-terminal domain LRO55_RS08030 PF04239 Protein of unknown function (DUF421) LRO55_RS08045 PF00593 TonB dependent receptor LRO55_RS08045 PF07715 TonB-dependent Receptor Plug Domain LRO55_RS08050 PF04977 Septum formation initiator LRO55_RS08055 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LRO55_RS08060 PF01144 Coenzyme A transferase LRO55_RS08065 PF01144 Coenzyme A transferase LRO55_RS08070 PF02803 Thiolase, C-terminal domain LRO55_RS08070 PF00108 Thiolase, N-terminal domain LRO55_RS08075 PF10397 Adenylosuccinate lyase C-terminus LRO55_RS08075 PF00206 Lyase LRO55_RS08080 PF00561 alpha/beta hydrolase fold LRO55_RS08085 PF07690 Major Facilitator Superfamily LRO55_RS08090 PF02627 Carboxymuconolactone decarboxylase family LRO55_RS08095 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal LRO55_RS08095 PF00775 Dioxygenase LRO55_RS08100 PF00775 Dioxygenase LRO55_RS08105 PF01487 Type I 3-dehydroquinase LRO55_RS08110 PF05048 Periplasmic copper-binding protein (NosD) LRO55_RS08115 PF04966 Carbohydrate-selective porin, OprB family LRO55_RS08120 PF13360 PQQ-like domain LRO55_RS08120 PF01011 PQQ enzyme repeat LRO55_RS08130 PF04143 Sulphur transport LRO55_RS08140 PF00753 Metallo-beta-lactamase superfamily LRO55_RS08145 PF01614 Bacterial transcriptional regulator LRO55_RS08145 PF09339 IclR helix-turn-helix domain LRO55_RS08150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS08150 PF03466 LysR substrate binding domain LRO55_RS08155 PF02770 Acyl-CoA dehydrogenase, middle domain LRO55_RS08155 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LRO55_RS08155 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LRO55_RS08170 PF00106 short chain dehydrogenase LRO55_RS08180 PF07690 Major Facilitator Superfamily LRO55_RS08190 PF01425 Amidase LRO55_RS08195 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LRO55_RS08210 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LRO55_RS08210 PF00355 Rieske [2Fe-2S] domain LRO55_RS08225 PF00111 2Fe-2S iron-sulfur cluster binding domain LRO55_RS08225 PF00175 Oxidoreductase NAD-binding domain LRO55_RS08230 PF01613 Flavin reductase like domain LRO55_RS08235 PF12833 Helix-turn-helix domain LRO55_RS08235 PF02311 AraC-like ligand binding domain LRO55_RS08240 PF02727 Copper amine oxidase, N2 domain LRO55_RS08240 PF07833 Copper amine oxidase N-terminal domain LRO55_RS08240 PF01179 Copper amine oxidase, enzyme domain LRO55_RS08240 PF02728 Copper amine oxidase, N3 domain LRO55_RS08250 PF00171 Aldehyde dehydrogenase family LRO55_RS08255 PF01804 Penicillin amidase LRO55_RS08260 PF12146 Serine aminopeptidase, S33 LRO55_RS08265 PF02803 Thiolase, C-terminal domain LRO55_RS08265 PF00108 Thiolase, N-terminal domain LRO55_RS08270 PF01144 Coenzyme A transferase LRO55_RS08275 PF01144 Coenzyme A transferase LRO55_RS08280 PF00775 Dioxygenase LRO55_RS08280 PF04444 Catechol dioxygenase N terminus LRO55_RS08285 PF02426 Muconolactone delta-isomerase LRO55_RS08290 PF13378 Enolase C-terminal domain-like LRO55_RS08290 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LRO55_RS08295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS08295 PF03466 LysR substrate binding domain LRO55_RS08305 PF07729 FCD domain LRO55_RS08305 PF00392 Bacterial regulatory proteins, gntR family LRO55_RS08310 PF00920 Dehydratase family LRO55_RS08315 PF07690 Major Facilitator Superfamily LRO55_RS08325 PF00171 Aldehyde dehydrogenase family LRO55_RS08330 PF00561 alpha/beta hydrolase fold LRO55_RS08340 PF07992 Pyridine nucleotide-disulphide oxidoreductase LRO55_RS08350 PF12706 Beta-lactamase superfamily domain LRO55_RS08355 PF00440 Bacterial regulatory proteins, tetR family LRO55_RS08355 PF08359 YsiA-like protein, C-terminal region LRO55_RS08375 PF14765 Polyketide synthase dehydratase LRO55_RS08375 PF00550 Phosphopantetheine attachment site LRO55_RS08375 PF08659 KR domain LRO55_RS08375 PF02801 Beta-ketoacyl synthase, C-terminal domain LRO55_RS08375 PF16197 Ketoacyl-synthetase C-terminal extension LRO55_RS08375 PF00698 Acyl transferase domain LRO55_RS08375 PF08240 Alcohol dehydrogenase GroES-like domain LRO55_RS08375 PF00109 Beta-ketoacyl synthase, N-terminal domain LRO55_RS08380 PF00106 short chain dehydrogenase LRO55_RS08395 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LRO55_RS08395 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LRO55_RS08395 PF00378 Enoyl-CoA hydratase/isomerase LRO55_RS08400 PF12146 Serine aminopeptidase, S33 LRO55_RS08405 PF00501 AMP-binding enzyme LRO55_RS08405 PF13193 AMP-binding enzyme C-terminal domain LRO55_RS08410 PF05199 GMC oxidoreductase LRO55_RS08415 PF00561 alpha/beta hydrolase fold LRO55_RS08420 PF00561 alpha/beta hydrolase fold LRO55_RS08430 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LRO55_RS08435 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LRO55_RS08435 PF12833 Helix-turn-helix domain LRO55_RS08440 PF00106 short chain dehydrogenase LRO55_RS08450 PF00106 short chain dehydrogenase LRO55_RS08455 PF01638 HxlR-like helix-turn-helix LRO55_RS08460 PF01638 HxlR-like helix-turn-helix LRO55_RS08465 PF05368 NmrA-like family LRO55_RS08470 PF12833 Helix-turn-helix domain LRO55_RS08470 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LRO55_RS08480 PF06314 Acetoacetate decarboxylase (ADC) LRO55_RS08490 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LRO55_RS08505 PF00440 Bacterial regulatory proteins, tetR family LRO55_RS08575 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) LRO55_RS08590 PF03055 Retinal pigment epithelial membrane protein LRO55_RS08615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS08615 PF03466 LysR substrate binding domain LRO55_RS08620 PF00202 Aminotransferase class-III LRO55_RS08625 PF00171 Aldehyde dehydrogenase family LRO55_RS08630 PF00324 Amino acid permease LRO55_RS08635 PF07690 Major Facilitator Superfamily LRO55_RS08640 PF04909 Amidohydrolase LRO55_RS08650 PF00392 Bacterial regulatory proteins, gntR family LRO55_RS08650 PF07702 UTRA domain LRO55_RS08665 PF13533 Biotin-lipoyl like LRO55_RS08690 PF14863 Alkyl sulfatase dimerisation LRO55_RS08690 PF00753 Metallo-beta-lactamase superfamily LRO55_RS08690 PF14864 Alkyl sulfatase C-terminal LRO55_RS08700 PF00313 'Cold-shock' DNA-binding domain LRO55_RS08705 PF01638 HxlR-like helix-turn-helix LRO55_RS08715 PF06719 AraC-type transcriptional regulator N-terminus LRO55_RS08715 PF12833 Helix-turn-helix domain LRO55_RS08720 PF08240 Alcohol dehydrogenase GroES-like domain LRO55_RS08720 PF00107 Zinc-binding dehydrogenase LRO55_RS08730 PF12146 Serine aminopeptidase, S33 LRO55_RS08735 PF02525 Flavodoxin-like fold LRO55_RS08740 PF12833 Helix-turn-helix domain LRO55_RS08740 PF06719 AraC-type transcriptional regulator N-terminus LRO55_RS08760 PF01032 FecCD transport family LRO55_RS08765 PF00005 ABC transporter LRO55_RS08785 PF14572 Phosphoribosyl synthetase-associated domain LRO55_RS08785 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LRO55_RS08790 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LRO55_RS08810 PF03472 Autoinducer binding domain LRO55_RS08810 PF00196 Bacterial regulatory proteins, luxR family LRO55_RS08815 PF01425 Amidase LRO55_RS08820 PF13533 Biotin-lipoyl like LRO55_RS08825 PF07690 Major Facilitator Superfamily LRO55_RS08850 PF13291 ACT domain LRO55_RS08850 PF04607 Region found in RelA / SpoT proteins LRO55_RS08850 PF02824 TGS domain LRO55_RS08890 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family LRO55_RS08910 PF00528 Binding-protein-dependent transport system inner membrane component LRO55_RS08915 PF00005 ABC transporter LRO55_RS08920 PF03544 Gram-negative bacterial TonB protein C-terminal LRO55_RS08925 PF01618 MotA/TolQ/ExbB proton channel family LRO55_RS08930 PF02472 Biopolymer transport protein ExbD/TolR LRO55_RS08940 PF02668 Taurine catabolism dioxygenase TauD, TfdA family LRO55_RS08950 PF00593 TonB dependent receptor LRO55_RS08950 PF07715 TonB-dependent Receptor Plug Domain LRO55_RS08955 PF00296 Luciferase-like monooxygenase LRO55_RS08960 PF00248 Aldo/keto reductase family LRO55_RS08965 PF07715 TonB-dependent Receptor Plug Domain LRO55_RS08965 PF00593 TonB dependent receptor LRO55_RS08970 PF00884 Sulfatase LRO55_RS08975 PF00027 Cyclic nucleotide-binding domain LRO55_RS08975 PF13545 Crp-like helix-turn-helix domain LRO55_RS08980 PF02668 Taurine catabolism dioxygenase TauD, TfdA family LRO55_RS08995 PF07969 Amidohydrolase family LRO55_RS09010 PF00005 ABC transporter LRO55_RS09010 PF17755 UvrA DNA-binding domain LRO55_RS09010 PF17760 UvrA interaction domain LRO55_RS09015 PF09905 DNA-binding protein VF530 LRO55_RS09020 PF00296 Luciferase-like monooxygenase LRO55_RS09025 PF00593 TonB dependent receptor LRO55_RS09025 PF07715 TonB-dependent Receptor Plug Domain LRO55_RS09035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LRO55_RS09040 PF02472 Biopolymer transport protein ExbD/TolR LRO55_RS09045 PF01618 MotA/TolQ/ExbB proton channel family LRO55_RS09050 PF03544 Gram-negative bacterial TonB protein C-terminal LRO55_RS09055 PF00296 Luciferase-like monooxygenase LRO55_RS09060 PF09084 NMT1/THI5 like LRO55_RS09065 PF00528 Binding-protein-dependent transport system inner membrane component LRO55_RS09070 PF00528 Binding-protein-dependent transport system inner membrane component LRO55_RS09075 PF00005 ABC transporter LRO55_RS09080 PF02416 mttA/Hcf106 family LRO55_RS09085 PF02416 mttA/Hcf106 family LRO55_RS09090 PF00902 Sec-independent protein translocase protein (TatC) LRO55_RS09095 PF00158 Sigma-54 interaction domain LRO55_RS09100 PF00296 Luciferase-like monooxygenase LRO55_RS09110 PF07715 TonB-dependent Receptor Plug Domain LRO55_RS09110 PF00593 TonB dependent receptor LRO55_RS09120 PF00664 ABC transporter transmembrane region LRO55_RS09120 PF00005 ABC transporter LRO55_RS09125 PF00664 ABC transporter transmembrane region LRO55_RS09125 PF00005 ABC transporter LRO55_RS09135 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LRO55_RS09135 PF02770 Acyl-CoA dehydrogenase, middle domain LRO55_RS09135 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LRO55_RS09140 PF00005 ABC transporter LRO55_RS09140 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LRO55_RS09145 PF00528 Binding-protein-dependent transport system inner membrane component LRO55_RS09145 PF12911 N-terminal TM domain of oligopeptide transport permease C LRO55_RS09150 PF00528 Binding-protein-dependent transport system inner membrane component LRO55_RS09155 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LRO55_RS09160 PF00296 Luciferase-like monooxygenase LRO55_RS09180 PF16970 Type-1 fimbrial protein, A LRO55_RS09185 PF02753 Pili assembly chaperone PapD, C-terminal domain LRO55_RS09185 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LRO55_RS09190 PF13954 PapC N-terminal domain LRO55_RS09190 PF13953 PapC C-terminal domain LRO55_RS09190 PF00577 Outer membrane usher protein LRO55_RS09205 PF00107 Zinc-binding dehydrogenase LRO55_RS09205 PF08240 Alcohol dehydrogenase GroES-like domain LRO55_RS09215 PF00199 Catalase LRO55_RS09235 PF13091 PLD-like domain LRO55_RS09245 PF00672 HAMP domain LRO55_RS09245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRO55_RS09245 PF00512 His Kinase A (phospho-acceptor) domain LRO55_RS09250 PF00072 Response regulator receiver domain LRO55_RS09250 PF00486 Transcriptional regulatory protein, C terminal LRO55_RS09255 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LRO55_RS09255 PF00529 HlyD membrane-fusion protein of T1SS LRO55_RS09260 PF00873 AcrB/AcrD/AcrF family LRO55_RS09275 PF01244 Membrane dipeptidase (Peptidase family M19) LRO55_RS09280 PF13186 Iron-sulfur cluster-binding domain LRO55_RS09280 PF04055 Radical SAM superfamily LRO55_RS09285 PF05402 Coenzyme PQQ synthesis protein D (PqqD) LRO55_RS09290 PF03070 TENA/THI-4/PQQC family LRO55_RS09295 PF12706 Beta-lactamase superfamily domain LRO55_RS09300 PF08042 PqqA family LRO55_RS09305 PF00149 Calcineurin-like phosphoesterase LRO55_RS09315 PF00593 TonB dependent receptor LRO55_RS09315 PF07715 TonB-dependent Receptor Plug Domain LRO55_RS09320 PF00873 AcrB/AcrD/AcrF family LRO55_RS09325 PF00857 Isochorismatase family LRO55_RS09325 PF00550 Phosphopantetheine attachment site LRO55_RS09335 PF00501 AMP-binding enzyme LRO55_RS09335 PF13193 AMP-binding enzyme C-terminal domain LRO55_RS09340 PF00425 chorismate binding enzyme LRO55_RS09345 PF00106 short chain dehydrogenase LRO55_RS09355 PF03621 MbtH-like protein LRO55_RS09360 PF00501 AMP-binding enzyme LRO55_RS09360 PF00668 Condensation domain LRO55_RS09360 PF00550 Phosphopantetheine attachment site LRO55_RS09360 PF00975 Thioesterase domain LRO55_RS09360 PF13193 AMP-binding enzyme C-terminal domain LRO55_RS09365 PF05977 Transmembrane secretion effector LRO55_RS09370 PF17837 4'-phosphopantetheinyl transferase N-terminal domain LRO55_RS09370 PF01648 4'-phosphopantetheinyl transferase superfamily LRO55_RS09385 PF00005 ABC transporter LRO55_RS09385 PF03459 TOBE domain LRO55_RS09390 PF00528 Binding-protein-dependent transport system inner membrane component LRO55_RS09400 PF03459 TOBE domain LRO55_RS09400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS09405 PF00355 Rieske [2Fe-2S] domain LRO55_RS09405 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LRO55_RS09410 PF00866 Ring hydroxylating beta subunit LRO55_RS09415 PF00175 Oxidoreductase NAD-binding domain LRO55_RS09415 PF00111 2Fe-2S iron-sulfur cluster binding domain LRO55_RS09415 PF00970 Oxidoreductase FAD-binding domain LRO55_RS09420 PF14525 AraC-binding-like domain LRO55_RS09420 PF12833 Helix-turn-helix domain LRO55_RS09430 PF01613 Flavin reductase like domain LRO55_RS09445 PF01738 Dienelactone hydrolase family LRO55_RS09455 PF07690 Major Facilitator Superfamily LRO55_RS09460 PF06719 AraC-type transcriptional regulator N-terminus LRO55_RS09460 PF12833 Helix-turn-helix domain LRO55_RS09545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS09545 PF03466 LysR substrate binding domain LRO55_RS09550 PF01144 Coenzyme A transferase LRO55_RS09555 PF01144 Coenzyme A transferase LRO55_RS09560 PF02667 Short chain fatty acid transporter LRO55_RS09565 PF02803 Thiolase, C-terminal domain LRO55_RS09565 PF00108 Thiolase, N-terminal domain LRO55_RS09570 PF03466 LysR substrate binding domain LRO55_RS09570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS09575 PF03466 LysR substrate binding domain LRO55_RS09575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS09590 PF10415 Fumarase C C-terminus LRO55_RS09590 PF00206 Lyase LRO55_RS09600 PF00083 Sugar (and other) transporter LRO55_RS09615 PF00005 ABC transporter LRO55_RS09620 PF00528 Binding-protein-dependent transport system inner membrane component LRO55_RS09625 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LRO55_RS09640 PF07702 UTRA domain LRO55_RS09640 PF00392 Bacterial regulatory proteins, gntR family LRO55_RS09650 PF12833 Helix-turn-helix domain LRO55_RS09650 PF06445 GyrI-like small molecule binding domain LRO55_RS09665 PF01925 Sulfite exporter TauE/SafE LRO55_RS09680 PF00753 Metallo-beta-lactamase superfamily LRO55_RS09680 PF04273 Putative phosphatase (DUF442) LRO55_RS09685 PF02954 Bacterial regulatory protein, Fis family LRO55_RS09685 PF00072 Response regulator receiver domain LRO55_RS09685 PF00158 Sigma-54 interaction domain LRO55_RS09700 PF08240 Alcohol dehydrogenase GroES-like domain LRO55_RS09700 PF00107 Zinc-binding dehydrogenase LRO55_RS09705 PF00106 short chain dehydrogenase LRO55_RS09710 PF07992 Pyridine nucleotide-disulphide oxidoreductase LRO55_RS09710 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LRO55_RS09715 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LRO55_RS09715 PF00364 Biotin-requiring enzyme LRO55_RS09715 PF02817 e3 binding domain LRO55_RS09720 PF02779 Transketolase, pyrimidine binding domain LRO55_RS09720 PF02780 Transketolase, C-terminal domain LRO55_RS09725 PF00676 Dehydrogenase E1 component LRO55_RS09730 PF04055 Radical SAM superfamily LRO55_RS09745 PF00990 Diguanylate cyclase, GGDEF domain LRO55_RS09745 PF08448 PAS fold LRO55_RS09755 PF01264 Chorismate synthase LRO55_RS09760 PF05175 Methyltransferase small domain LRO55_RS09765 PF00291 Pyridoxal-phosphate dependent enzyme LRO55_RS09775 PF00004 ATPase family associated with various cellular activities (AAA) LRO55_RS09775 PF17862 AAA+ lid domain LRO55_RS09775 PF01434 Peptidase family M41 LRO55_RS09785 PF05166 YcgL domain LRO55_RS09805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS09805 PF03466 LysR substrate binding domain LRO55_RS09810 PF02525 Flavodoxin-like fold LRO55_RS09815 PF01612 3'-5' exonuclease LRO55_RS09815 PF00570 HRDC domain LRO55_RS09820 PF13662 Toprim domain LRO55_RS09820 PF02132 RecR protein LRO55_RS09825 PF02575 YbaB/EbfC DNA-binding family LRO55_RS09835 PF01053 Cys/Met metabolism PLP-dependent enzyme LRO55_RS09845 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LRO55_RS09845 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LRO55_RS09855 PF01230 HIT domain LRO55_RS09880 PF02684 Lipid-A-disaccharide synthetase LRO55_RS09885 PF00593 TonB dependent receptor LRO55_RS09885 PF07715 TonB-dependent Receptor Plug Domain LRO55_RS09905 PF01925 Sulfite exporter TauE/SafE LRO55_RS09910 PF00793 DAHP synthetase I family LRO55_RS09915 PF02654 Cobalamin-5-phosphate synthase LRO55_RS09925 PF00300 Histidine phosphatase superfamily (branch 1) LRO55_RS09930 PF02277 Phosphoribosyltransferase LRO55_RS09935 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase LRO55_RS09945 PF13419 Haloacid dehalogenase-like hydrolase LRO55_RS09950 PF04073 Aminoacyl-tRNA editing domain LRO55_RS09960 PF03109 ABC1 family LRO55_RS09965 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LRO55_RS09965 PF02770 Acyl-CoA dehydrogenase, middle domain LRO55_RS09965 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LRO55_RS09970 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LRO55_RS09970 PF02770 Acyl-CoA dehydrogenase, middle domain LRO55_RS09970 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LRO55_RS09975 PF00487 Fatty acid desaturase LRO55_RS09980 PF12852 Cupin LRO55_RS09980 PF12833 Helix-turn-helix domain LRO55_RS09985 PF00639 PPIC-type PPIASE domain LRO55_RS09985 PF09312 SurA N-terminal domain LRO55_RS09990 PF00216 Bacterial DNA-binding protein LRO55_RS10005 PF02082 Transcriptional regulator LRO55_RS10010 PF00266 Aminotransferase class-V LRO55_RS10015 PF01592 NifU-like N terminal domain LRO55_RS10020 PF01521 Iron-sulphur cluster biosynthesis LRO55_RS10025 PF07743 HSCB C-terminal oligomerisation domain LRO55_RS10025 PF00226 DnaJ domain LRO55_RS10030 PF00012 Hsp70 protein LRO55_RS10035 PF00111 2Fe-2S iron-sulfur cluster binding domain LRO55_RS10040 PF00211 Adenylate and Guanylate cyclase catalytic domain LRO55_RS10050 PF02559 CarD-like/TRCF domain LRO55_RS10050 PF00270 DEAD/DEAH box helicase LRO55_RS10050 PF00271 Helicase conserved C-terminal domain LRO55_RS10050 PF03461 TRCF domain LRO55_RS10050 PF17757 UvrB interaction domain LRO55_RS10070 PF03737 Aldolase/RraA LRO55_RS10075 PF13460 NAD(P)H-binding LRO55_RS10080 PF01649 Ribosomal protein S20 LRO55_RS10090 PF00459 Inositol monophosphatase family LRO55_RS10105 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LRO55_RS10105 PF00005 ABC transporter LRO55_RS10110 PF00528 Binding-protein-dependent transport system inner membrane component LRO55_RS10110 PF12911 N-terminal TM domain of oligopeptide transport permease C LRO55_RS10115 PF00528 Binding-protein-dependent transport system inner membrane component LRO55_RS10120 PF01432 Peptidase family M3 LRO55_RS10125 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LRO55_RS10135 PF00593 TonB dependent receptor LRO55_RS10135 PF07715 TonB-dependent Receptor Plug Domain LRO55_RS10140 PF03544 Gram-negative bacterial TonB protein C-terminal LRO55_RS10145 PF01618 MotA/TolQ/ExbB proton channel family LRO55_RS10150 PF02472 Biopolymer transport protein ExbD/TolR LRO55_RS10155 PF02472 Biopolymer transport protein ExbD/TolR LRO55_RS10165 PF01274 Malate synthase LRO55_RS10170 PF03969 AFG1-like ATPase LRO55_RS10180 PF00743 Flavin-binding monooxygenase-like LRO55_RS10185 PF03956 Lysine exporter LysO LRO55_RS10190 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LRO55_RS10200 PF00216 Bacterial DNA-binding protein LRO55_RS10205 PF00575 S1 RNA binding domain LRO55_RS10210 PF02224 Cytidylate kinase LRO55_RS10220 PF14437 MafB19-like deaminase LRO55_RS10230 PF03167 Uracil DNA glycosylase superfamily LRO55_RS10240 PF03934 Type II secretion system (T2SS), protein K LRO55_RS10245 PF07963 Prokaryotic N-terminal methylation motif LRO55_RS10245 PF11612 Type II secretion system (T2SS), protein J LRO55_RS10250 PF07963 Prokaryotic N-terminal methylation motif LRO55_RS10250 PF02501 Type II secretion system (T2SS), protein I LRO55_RS10265 PF01026 TatD related DNase LRO55_RS10275 PF09115 DNA polymerase III, delta subunit, C terminal LRO55_RS10280 PF02348 Cytidylyltransferase LRO55_RS10285 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LRO55_RS10290 PF00664 ABC transporter transmembrane region LRO55_RS10290 PF00005 ABC transporter LRO55_RS10300 PF01618 MotA/TolQ/ExbB proton channel family LRO55_RS10305 PF02195 ParB-like nuclease domain LRO55_RS10305 PF17762 HTH domain found in ParB protein LRO55_RS10310 PF13614 AAA domain LRO55_RS10315 PF02527 rRNA small subunit methyltransferase G LRO55_RS10320 PF00483 Nucleotidyl transferase LRO55_RS10325 PF01636 Phosphotransferase enzyme family LRO55_RS10330 PF04453 LPS transport system D LRO55_RS10330 PF03968 OstA-like protein LRO55_RS10335 PF09312 SurA N-terminal domain LRO55_RS10335 PF00639 PPIC-type PPIASE domain LRO55_RS10340 PF01116 Fructose-bisphosphate aldolase class-II LRO55_RS10350 PF00162 Phosphoglycerate kinase LRO55_RS10360 PF02545 Maf-like protein LRO55_RS10365 PF08007 Cupin superfamily protein LRO55_RS10380 PF00375 Sodium:dicarboxylate symporter family LRO55_RS10385 PF06912 Protein of unknown function (DUF1275) LRO55_RS10390 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) LRO55_RS10395 PF00664 ABC transporter transmembrane region LRO55_RS10395 PF00005 ABC transporter LRO55_RS10405 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LRO55_RS10405 PF12833 Helix-turn-helix domain LRO55_RS10410 PF01597 Glycine cleavage H-protein LRO55_RS10415 PF02146 Sir2 family LRO55_RS10420 PF00474 Sodium:solute symporter family LRO55_RS10425 PF01037 Lrp/AsnC ligand binding domain LRO55_RS10430 PF01619 Proline dehydrogenase LRO55_RS10430 PF00171 Aldehyde dehydrogenase family LRO55_RS10430 PF18327 Proline utilization A proline dehydrogenase N-terminal domain LRO55_RS10430 PF14850 DNA-binding domain of Proline dehydrogenase LRO55_RS10435 PF04229 GrpB protein LRO55_RS10440 PF05958 tRNA (Uracil-5-)-methyltransferase LRO55_RS10450 PF09992 Phosphodiester glycosidase LRO55_RS10460 PF04264 YceI-like domain LRO55_RS10470 PF02779 Transketolase, pyrimidine binding domain LRO55_RS10470 PF02780 Transketolase, C-terminal domain LRO55_RS10470 PF00456 Transketolase, thiamine diphosphate binding domain LRO55_RS10475 PF02773 S-adenosylmethionine synthetase, C-terminal domain LRO55_RS10475 PF00438 S-adenosylmethionine synthetase, N-terminal domain LRO55_RS10475 PF02772 S-adenosylmethionine synthetase, central domain LRO55_RS10495 PF00905 Penicillin binding protein transpeptidase domain LRO55_RS10510 PF02075 Crossover junction endodeoxyribonuclease RuvC LRO55_RS10515 PF01256 Carbohydrate kinase LRO55_RS10515 PF03853 YjeF-related protein N-terminus LRO55_RS10520 PF08331 Domain of unknown function (DUF1730) LRO55_RS10525 PF06968 Biotin and Thiamin Synthesis associated domain LRO55_RS10525 PF04055 Radical SAM superfamily LRO55_RS10540 PF16970 Type-1 fimbrial protein, A LRO55_RS10545 PF02753 Pili assembly chaperone PapD, C-terminal domain LRO55_RS10545 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LRO55_RS10550 PF00577 Outer membrane usher protein LRO55_RS10550 PF13954 PapC N-terminal domain LRO55_RS10550 PF13953 PapC C-terminal domain LRO55_RS10555 PF00419 Fimbrial protein LRO55_RS10565 PF12833 Helix-turn-helix domain LRO55_RS10565 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LRO55_RS10575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS10575 PF03466 LysR substrate binding domain LRO55_RS10580 PF00892 EamA-like transporter family LRO55_RS10590 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LRO55_RS10600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS10600 PF03466 LysR substrate binding domain LRO55_RS10615 PF00440 Bacterial regulatory proteins, tetR family LRO55_RS10625 PF01709 Transcriptional regulator LRO55_RS10630 PF01037 Lrp/AsnC ligand binding domain LRO55_RS10640 PF00005 ABC transporter LRO55_RS10645 PF00528 Binding-protein-dependent transport system inner membrane component LRO55_RS10650 PF00528 Binding-protein-dependent transport system inner membrane component LRO55_RS10655 PF00497 Bacterial extracellular solute-binding proteins, family 3 LRO55_RS10665 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LRO55_RS10665 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LRO55_RS10675 PF00296 Luciferase-like monooxygenase LRO55_RS10680 PF03180 NLPA lipoprotein LRO55_RS10685 PF03180 NLPA lipoprotein LRO55_RS10690 PF09383 NIL domain LRO55_RS10690 PF00005 ABC transporter LRO55_RS10695 PF00528 Binding-protein-dependent transport system inner membrane component LRO55_RS10700 PF01926 50S ribosome-binding GTPase LRO55_RS10700 PF06071 Protein of unknown function (DUF933) LRO55_RS10725 PF03591 AzlC protein LRO55_RS10730 PF05437 Branched-chain amino acid transport protein (AzlD) LRO55_RS10740 PF02222 ATP-grasp domain LRO55_RS10745 PF01909 Nucleotidyltransferase domain LRO55_RS10745 PF01966 HD domain LRO55_RS10745 PF08335 GlnD PII-uridylyltransferase LRO55_RS10750 PF00155 Aminotransferase class I and II LRO55_RS10760 PF02311 AraC-like ligand binding domain LRO55_RS10760 PF12833 Helix-turn-helix domain LRO55_RS10765 PF00255 Glutathione peroxidase LRO55_RS10770 PF01641 SelR domain LRO55_RS10775 PF00155 Aminotransferase class I and II LRO55_RS10780 PF00375 Sodium:dicarboxylate symporter family LRO55_RS10785 PF00710 Asparaginase, N-terminal LRO55_RS10785 PF17763 Glutaminase/Asparaginase C-terminal domain LRO55_RS10790 PF07733 Bacterial DNA polymerase III alpha NTPase domain LRO55_RS10790 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LRO55_RS10790 PF14579 Helix-hairpin-helix motif LRO55_RS10790 PF02811 PHP domain LRO55_RS10790 PF01336 OB-fold nucleic acid binding domain LRO55_RS10795 PF00588 SpoU rRNA Methylase family LRO55_RS10800 PF00132 Bacterial transferase hexapeptide (six repeats) LRO55_RS10815 PF07992 Pyridine nucleotide-disulphide oxidoreductase LRO55_RS10815 PF13192 Thioredoxin domain LRO55_RS10830 PF03466 LysR substrate binding domain LRO55_RS10830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS10835 PF03358 NADPH-dependent FMN reductase LRO55_RS10840 PF01758 Sodium Bile acid symporter family LRO55_RS10850 PF01022 Bacterial regulatory protein, arsR family LRO55_RS10855 PF03960 ArsC family LRO55_RS10865 PF01979 Amidohydrolase family LRO55_RS10865 PF13382 Adenine deaminase C-terminal domain LRO55_RS10875 PF03466 LysR substrate binding domain LRO55_RS10875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS10885 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LRO55_RS10890 PF01177 Asp/Glu/Hydantoin racemase LRO55_RS10895 PF02668 Taurine catabolism dioxygenase TauD, TfdA family LRO55_RS10900 PF00528 Binding-protein-dependent transport system inner membrane component LRO55_RS10905 PF00005 ABC transporter LRO55_RS10910 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LRO55_RS10920 PF00083 Sugar (and other) transporter LRO55_RS10925 PF00296 Luciferase-like monooxygenase LRO55_RS10930 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LRO55_RS10930 PF02770 Acyl-CoA dehydrogenase, middle domain LRO55_RS10930 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LRO55_RS10940 PF01654 Cytochrome bd terminal oxidase subunit I LRO55_RS10945 PF02322 Cytochrome bd terminal oxidase subunit II LRO55_RS10955 PF00392 Bacterial regulatory proteins, gntR family LRO55_RS10955 PF00155 Aminotransferase class I and II LRO55_RS10960 PF03466 LysR substrate binding domain LRO55_RS10960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS10975 PF00698 Acyl transferase domain LRO55_RS10980 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG LRO55_RS10990 PF01039 Carboxyl transferase domain LRO55_RS10995 PF06857 Malonate decarboxylase delta subunit (MdcD) LRO55_RS11000 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase LRO55_RS11005 PF16957 Malonate decarboxylase, alpha subunit, transporter LRO55_RS11010 PF07690 Major Facilitator Superfamily LRO55_RS11025 PF00392 Bacterial regulatory proteins, gntR family LRO55_RS11025 PF00155 Aminotransferase class I and II LRO55_RS11030 PF04172 LrgB-like family LRO55_RS11035 PF03788 LrgA family LRO55_RS11040 PF03466 LysR substrate binding domain LRO55_RS11040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS11045 PF14834 Glutathione S-transferase, C-terminal domain LRO55_RS11045 PF02798 Glutathione S-transferase, N-terminal domain LRO55_RS11050 PF02798 Glutathione S-transferase, N-terminal domain LRO55_RS11070 PF00581 Rhodanese-like domain LRO55_RS11075 PF00132 Bacterial transferase hexapeptide (six repeats) LRO55_RS11085 PF00266 Aminotransferase class-V LRO55_RS11095 PF01810 LysE type translocator LRO55_RS11100 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LRO55_RS11100 PF01411 tRNA synthetases class II (A) LRO55_RS11100 PF02272 DHHA1 domain LRO55_RS11105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS11105 PF03466 LysR substrate binding domain LRO55_RS11115 PF00497 Bacterial extracellular solute-binding proteins, family 3 LRO55_RS11120 PF00497 Bacterial extracellular solute-binding proteins, family 3 LRO55_RS11125 PF00005 ABC transporter LRO55_RS11130 PF00528 Binding-protein-dependent transport system inner membrane component LRO55_RS11135 PF00528 Binding-protein-dependent transport system inner membrane component LRO55_RS11145 PF14542 GCN5-related N-acetyl-transferase LRO55_RS11150 PF07690 Major Facilitator Superfamily LRO55_RS11155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS11155 PF03466 LysR substrate binding domain LRO55_RS11165 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LRO55_RS11170 PF00072 Response regulator receiver domain LRO55_RS11185 PF01037 Lrp/AsnC ligand binding domain LRO55_RS11185 PF13404 AsnC-type helix-turn-helix domain LRO55_RS11195 PF00717 Peptidase S24-like LRO55_RS11225 PF18011 C-terminal domain found in long catalases LRO55_RS11225 PF00199 Catalase LRO55_RS11225 PF06628 Catalase-related immune-responsive LRO55_RS11260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS11260 PF03466 LysR substrate binding domain LRO55_RS11270 PF07690 Major Facilitator Superfamily LRO55_RS11280 PF13649 Methyltransferase domain LRO55_RS11285 PF00501 AMP-binding enzyme LRO55_RS11285 PF13193 AMP-binding enzyme C-terminal domain LRO55_RS11290 PF00440 Bacterial regulatory proteins, tetR family LRO55_RS11295 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LRO55_RS11295 PF02770 Acyl-CoA dehydrogenase, middle domain LRO55_RS11295 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LRO55_RS11300 PF01039 Carboxyl transferase domain LRO55_RS11305 PF00378 Enoyl-CoA hydratase/isomerase LRO55_RS11310 PF02785 Biotin carboxylase C-terminal domain LRO55_RS11310 PF18140 Propionyl-coenzyme A carboxylase BT domain LRO55_RS11310 PF00289 Biotin carboxylase, N-terminal domain LRO55_RS11310 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LRO55_RS11310 PF00364 Biotin-requiring enzyme LRO55_RS11315 PF00682 HMGL-like LRO55_RS11320 PF03466 LysR substrate binding domain LRO55_RS11320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS11335 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LRO55_RS11335 PF02770 Acyl-CoA dehydrogenase, middle domain LRO55_RS11335 PF12806 Acetyl-CoA dehydrogenase C-terminal like LRO55_RS11335 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LRO55_RS11345 PF07690 Major Facilitator Superfamily LRO55_RS11355 PF01144 Coenzyme A transferase LRO55_RS11360 PF01144 Coenzyme A transferase LRO55_RS11365 PF07690 Major Facilitator Superfamily LRO55_RS11370 PF07690 Major Facilitator Superfamily LRO55_RS11375 PF02770 Acyl-CoA dehydrogenase, middle domain LRO55_RS11375 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LRO55_RS11375 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LRO55_RS11380 PF00378 Enoyl-CoA hydratase/isomerase LRO55_RS11390 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LRO55_RS11390 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LRO55_RS11390 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain LRO55_RS11395 PF02803 Thiolase, C-terminal domain LRO55_RS11395 PF00108 Thiolase, N-terminal domain LRO55_RS11400 PF09339 IclR helix-turn-helix domain LRO55_RS11410 PF01810 LysE type translocator LRO55_RS11415 PF16861 Carbamoyltransferase C-terminus LRO55_RS11415 PF02543 Carbamoyltransferase N-terminus LRO55_RS11425 PF03060 Nitronate monooxygenase LRO55_RS11430 PF00378 Enoyl-CoA hydratase/isomerase LRO55_RS11435 PF09339 IclR helix-turn-helix domain LRO55_RS11440 PF02515 CoA-transferase family III LRO55_RS11445 PF02770 Acyl-CoA dehydrogenase, middle domain LRO55_RS11445 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LRO55_RS11445 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LRO55_RS11450 PF07690 Major Facilitator Superfamily LRO55_RS11455 PF01494 FAD binding domain LRO55_RS11460 PF01614 Bacterial transcriptional regulator LRO55_RS11460 PF09339 IclR helix-turn-helix domain LRO55_RS11510 PF03315 Serine dehydratase beta chain LRO55_RS11510 PF03313 Serine dehydratase alpha chain LRO55_RS11525 PF09278 MerR, DNA binding LRO55_RS11525 PF00376 MerR family regulatory protein LRO55_RS11535 PF02677 Epoxyqueuosine reductase QueH LRO55_RS11540 PF00392 Bacterial regulatory proteins, gntR family LRO55_RS11540 PF00155 Aminotransferase class I and II LRO55_RS11555 PF07690 Major Facilitator Superfamily LRO55_RS11560 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LRO55_RS11570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS11570 PF03466 LysR substrate binding domain LRO55_RS11590 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE LRO55_RS11595 PF06812 ImpA, N-terminal, type VI secretion system LRO55_RS11600 PF07724 AAA domain (Cdc48 subfamily) LRO55_RS11600 PF00004 ATPase family associated with various cellular activities (AAA) LRO55_RS11600 PF17871 AAA lid domain LRO55_RS11600 PF10431 C-terminal, D2-small domain, of ClpB protein LRO55_RS11615 PF00691 OmpA family LRO55_RS11615 PF18393 MotY N-terminal domain LRO55_RS11625 PF06744 Type VI secretion protein IcmF C-terminal LRO55_RS11625 PF14331 ImcF-related N-terminal domain LRO55_RS11625 PF06761 Intracellular multiplication and human macrophage-killing LRO55_RS11640 PF05947 Type VI secretion system, TssF LRO55_RS11655 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath LRO55_RS11695 PF13296 Putative type VI secretion system Rhs element Vgr LRO55_RS11695 PF04717 Type VI secretion system, phage-baseplate injector LRO55_RS11695 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) LRO55_RS11705 PF05593 RHS Repeat LRO55_RS11705 PF03527 RHS protein LRO55_RS11710 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) LRO55_RS11710 PF04717 Type VI secretion system, phage-baseplate injector LRO55_RS11710 PF13296 Putative type VI secretion system Rhs element Vgr LRO55_RS11715 PF03466 LysR substrate binding domain LRO55_RS11715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS11720 PF07690 Major Facilitator Superfamily LRO55_RS11735 PF00005 ABC transporter LRO55_RS11740 PF00497 Bacterial extracellular solute-binding proteins, family 3 LRO55_RS11745 PF01425 Amidase LRO55_RS11750 PF08753 NikR C terminal nickel binding domain LRO55_RS11750 PF01402 Ribbon-helix-helix protein, copG family LRO55_RS11765 PF01638 HxlR-like helix-turn-helix LRO55_RS11770 PF02525 Flavodoxin-like fold LRO55_RS11775 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LRO55_RS11775 PF02785 Biotin carboxylase C-terminal domain LRO55_RS11775 PF00289 Biotin carboxylase, N-terminal domain LRO55_RS11790 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LRO55_RS11790 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LRO55_RS11795 PF00892 EamA-like transporter family LRO55_RS11840 PF00654 Voltage gated chloride channel LRO55_RS11845 PF02785 Biotin carboxylase C-terminal domain LRO55_RS11845 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LRO55_RS11845 PF00364 Biotin-requiring enzyme LRO55_RS11845 PF00289 Biotin carboxylase, N-terminal domain LRO55_RS11855 PF07286 Protein of unknown function (DUF1445) LRO55_RS11860 PF03746 LamB/YcsF family LRO55_RS11865 PF01566 Natural resistance-associated macrophage protein LRO55_RS11870 PF03466 LysR substrate binding domain LRO55_RS11870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS11915 PF14278 Transcriptional regulator C-terminal region LRO55_RS11915 PF00440 Bacterial regulatory proteins, tetR family LRO55_RS11930 PF00440 Bacterial regulatory proteins, tetR family LRO55_RS11940 PF00561 alpha/beta hydrolase fold LRO55_RS11945 PF07859 alpha/beta hydrolase fold LRO55_RS11950 PF03797 Autotransporter beta-domain LRO55_RS11950 PF12951 Passenger-associated-transport-repeat LRO55_RS11950 PF00082 Subtilase family LRO55_RS11955 PF07681 DoxX LRO55_RS11960 PF00990 Diguanylate cyclase, GGDEF domain LRO55_RS11960 PF03707 Bacterial signalling protein N terminal repeat LRO55_RS11960 PF00563 EAL domain LRO55_RS11970 PF16220 Domain of unknown function (DUF4880) LRO55_RS11970 PF04773 FecR protein LRO55_RS11975 PF07715 TonB-dependent Receptor Plug Domain LRO55_RS11975 PF00593 TonB dependent receptor LRO55_RS12020 PF01425 Amidase LRO55_RS12025 PF02979 Nitrile hydratase, alpha chain LRO55_RS12030 PF02211 Nitrile hydratase beta subunit LRO55_RS12035 PF02492 CobW/HypB/UreG, nucleotide-binding domain LRO55_RS12035 PF07683 Cobalamin synthesis protein cobW C-terminal domain LRO55_RS12040 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LRO55_RS12045 PF00528 Binding-protein-dependent transport system inner membrane component LRO55_RS12050 PF00005 ABC transporter LRO55_RS12055 PF00291 Pyridoxal-phosphate dependent enzyme LRO55_RS12060 PF01177 Asp/Glu/Hydantoin racemase LRO55_RS12070 PF01037 Lrp/AsnC ligand binding domain LRO55_RS12075 PF00892 EamA-like transporter family LRO55_RS12125 PF13520 Amino acid permease LRO55_RS12130 PF01636 Phosphotransferase enzyme family LRO55_RS12140 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LRO55_RS12140 PF12833 Helix-turn-helix domain LRO55_RS12145 PF00202 Aminotransferase class-III LRO55_RS12175 PF03061 Thioesterase superfamily LRO55_RS12180 PF00132 Bacterial transferase hexapeptide (six repeats) LRO55_RS12185 PF07848 PaaX-like protein LRO55_RS12185 PF08223 PaaX-like protein C-terminal domain LRO55_RS12190 PF00501 AMP-binding enzyme LRO55_RS12190 PF14535 AMP-binding enzyme C-terminal domain LRO55_RS12195 PF02803 Thiolase, C-terminal domain LRO55_RS12195 PF00108 Thiolase, N-terminal domain LRO55_RS12200 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LRO55_RS12200 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LRO55_RS12200 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain LRO55_RS12205 PF00378 Enoyl-CoA hydratase/isomerase LRO55_RS12210 PF00378 Enoyl-CoA hydratase/isomerase LRO55_RS12215 PF00111 2Fe-2S iron-sulfur cluster binding domain LRO55_RS12215 PF00175 Oxidoreductase NAD-binding domain LRO55_RS12215 PF00970 Oxidoreductase FAD-binding domain LRO55_RS12220 PF01883 Iron-sulfur cluster assembly protein LRO55_RS12225 PF05138 Phenylacetic acid catabolic protein LRO55_RS12230 PF06243 Phenylacetic acid degradation B LRO55_RS12235 PF05138 Phenylacetic acid catabolic protein LRO55_RS12240 PF00171 Aldehyde dehydrogenase family LRO55_RS12240 PF01575 MaoC like domain LRO55_RS12250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS12250 PF03466 LysR substrate binding domain LRO55_RS12255 PF00488 MutS domain V LRO55_RS12255 PF05190 MutS family domain IV LRO55_RS12255 PF05192 MutS domain III LRO55_RS12255 PF05188 MutS domain II LRO55_RS12255 PF01624 MutS domain I LRO55_RS12265 PF11953 Domain of unknown function (DUF3470) LRO55_RS12265 PF00037 4Fe-4S binding domain LRO55_RS12280 PF01596 O-methyltransferase LRO55_RS12290 PF00132 Bacterial transferase hexapeptide (six repeats) LRO55_RS12295 PF01205 Uncharacterized protein family UPF0029 LRO55_RS12300 PF13533 Biotin-lipoyl like LRO55_RS12305 PF00664 ABC transporter transmembrane region LRO55_RS12305 PF00005 ABC transporter LRO55_RS12305 PF03412 Peptidase C39 family LRO55_RS12310 PF02321 Outer membrane efflux protein LRO55_RS12320 PF00005 ABC transporter LRO55_RS12320 PF12399 Branched-chain amino acid ATP-binding cassette transporter LRO55_RS12325 PF03968 OstA-like protein LRO55_RS12340 PF01380 SIS domain LRO55_RS12340 PF00571 CBS domain LRO55_RS12345 PF09190 DALR domain LRO55_RS12345 PF01406 tRNA synthetases class I (C) catalytic domain LRO55_RS12380 PF01638 HxlR-like helix-turn-helix LRO55_RS12385 PF07690 Major Facilitator Superfamily LRO55_RS12400 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LRO55_RS12400 PF07992 Pyridine nucleotide-disulphide oxidoreductase LRO55_RS12415 PF00924 Mechanosensitive ion channel LRO55_RS12470 PF08241 Methyltransferase domain LRO55_RS12475 PF01037 Lrp/AsnC ligand binding domain LRO55_RS12485 PF03807 NADP oxidoreductase coenzyme F420-dependent LRO55_RS12485 PF14748 Pyrroline-5-carboxylate reductase dimerisation LRO55_RS12495 PF00313 'Cold-shock' DNA-binding domain LRO55_RS12500 PF03279 Bacterial lipid A biosynthesis acyltransferase LRO55_RS12505 PF01810 LysE type translocator LRO55_RS12540 PF02601 Exonuclease VII, large subunit LRO55_RS12540 PF13742 OB-fold nucleic acid binding domain LRO55_RS12575 PF00376 MerR family regulatory protein LRO55_RS12575 PF09278 MerR, DNA binding LRO55_RS12580 PF00403 Heavy-metal-associated domain LRO55_RS12590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS12590 PF03466 LysR substrate binding domain LRO55_RS12600 PF00355 Rieske [2Fe-2S] domain LRO55_RS12600 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LRO55_RS12610 PF00111 2Fe-2S iron-sulfur cluster binding domain LRO55_RS12610 PF00175 Oxidoreductase NAD-binding domain LRO55_RS12610 PF00970 Oxidoreductase FAD-binding domain LRO55_RS12615 PF00106 short chain dehydrogenase LRO55_RS12620 PF03594 Benzoate membrane transport protein LRO55_RS12625 PF07690 Major Facilitator Superfamily LRO55_RS12635 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LRO55_RS12635 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LRO55_RS12640 PF00270 DEAD/DEAH box helicase LRO55_RS12640 PF11898 Domain of unknown function (DUF3418) LRO55_RS12640 PF04408 Helicase associated domain (HA2) LRO55_RS12640 PF00271 Helicase conserved C-terminal domain LRO55_RS12640 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LRO55_RS12645 PF10417 C-terminal domain of 1-Cys peroxiredoxin LRO55_RS12645 PF00578 AhpC/TSA family LRO55_RS12655 PF00487 Fatty acid desaturase LRO55_RS12675 PF13192 Thioredoxin domain LRO55_RS12675 PF07992 Pyridine nucleotide-disulphide oxidoreductase LRO55_RS12685 PF00043 Glutathione S-transferase, C-terminal domain LRO55_RS12685 PF02798 Glutathione S-transferase, N-terminal domain LRO55_RS12695 PF02390 Putative methyltransferase LRO55_RS12705 PF13417 Glutathione S-transferase, N-terminal domain LRO55_RS12705 PF00043 Glutathione S-transferase, C-terminal domain LRO55_RS12715 PF00691 OmpA family LRO55_RS12715 PF13488 Glycine zipper LRO55_RS12720 PF01979 Amidohydrolase family LRO55_RS12725 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LRO55_RS12725 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LRO55_RS12735 PF10672 S-adenosylmethionine-dependent methyltransferase LRO55_RS12735 PF01170 Putative RNA methylase family UPF0020 LRO55_RS12735 PF02926 THUMP domain LRO55_RS12750 PF02861 Clp amino terminal domain, pathogenicity island component LRO55_RS12750 PF00004 ATPase family associated with various cellular activities (AAA) LRO55_RS12750 PF10431 C-terminal, D2-small domain, of ClpB protein LRO55_RS12750 PF17871 AAA lid domain LRO55_RS12750 PF07724 AAA domain (Cdc48 subfamily) LRO55_RS12765 PF02566 OsmC-like protein LRO55_RS12775 PF00027 Cyclic nucleotide-binding domain LRO55_RS12775 PF13545 Crp-like helix-turn-helix domain LRO55_RS12780 PF00248 Aldo/keto reductase family LRO55_RS12795 PF00709 Adenylosuccinate synthetase LRO55_RS12800 PF13393 Histidyl-tRNA synthetase LRO55_RS12810 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LRO55_RS12810 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LRO55_RS12815 PF01411 tRNA synthetases class II (A) LRO55_RS12815 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LRO55_RS12815 PF02272 DHHA1 domain LRO55_RS12820 PF13840 ACT domain LRO55_RS12820 PF00696 Amino acid kinase family LRO55_RS12820 PF01842 ACT domain LRO55_RS12825 PF02599 Global regulator protein family LRO55_RS12830 PF01351 Ribonuclease HII LRO55_RS12840 PF01292 Prokaryotic cytochrome b561 LRO55_RS12845 PF00962 Adenosine/AMP deaminase LRO55_RS12850 PF00860 Permease family LRO55_RS12860 PF17954 Quercetinase C-terminal cupin domain LRO55_RS12860 PF02678 Pirin LRO55_RS12865 PF00440 Bacterial regulatory proteins, tetR family LRO55_RS12865 PF17932 Tetracyclin repressor-like, C-terminal domain LRO55_RS12875 PF00106 short chain dehydrogenase LRO55_RS12880 PF00743 Flavin-binding monooxygenase-like LRO55_RS12885 PF04072 Leucine carboxyl methyltransferase LRO55_RS12890 PF12833 Helix-turn-helix domain LRO55_RS12890 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LRO55_RS12895 PF00743 Flavin-binding monooxygenase-like LRO55_RS12900 PF00106 short chain dehydrogenase LRO55_RS12905 PF07859 alpha/beta hydrolase fold LRO55_RS12910 PF05199 GMC oxidoreductase LRO55_RS12915 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding LRO55_RS12915 PF18381 YcaO cyclodehydratase C-terminal domain LRO55_RS12920 PF03573 outer membrane porin, OprD family LRO55_RS12925 PF07690 Major Facilitator Superfamily LRO55_RS12930 PF00884 Sulfatase LRO55_RS12935 PF03781 Sulfatase-modifying factor enzyme 1 LRO55_RS12945 PF00355 Rieske [2Fe-2S] domain LRO55_RS12950 PF00111 2Fe-2S iron-sulfur cluster binding domain LRO55_RS12950 PF00175 Oxidoreductase NAD-binding domain LRO55_RS12965 PF07690 Major Facilitator Superfamily LRO55_RS12970 PF00378 Enoyl-CoA hydratase/isomerase LRO55_RS12975 PF00171 Aldehyde dehydrogenase family LRO55_RS12985 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LRO55_RS12985 PF02770 Acyl-CoA dehydrogenase, middle domain LRO55_RS12985 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LRO55_RS12990 PF03573 outer membrane porin, OprD family LRO55_RS13005 PF07519 Tannase and feruloyl esterase LRO55_RS13010 PF00392 Bacterial regulatory proteins, gntR family LRO55_RS13010 PF07729 FCD domain LRO55_RS13015 PF00171 Aldehyde dehydrogenase family LRO55_RS13020 PF00701 Dihydrodipicolinate synthetase family LRO55_RS13025 PF13378 Enolase C-terminal domain-like LRO55_RS13030 PF07690 Major Facilitator Superfamily LRO55_RS13035 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus LRO55_RS13035 PF08666 SAF domain LRO55_RS13040 PF00892 EamA-like transporter family LRO55_RS13045 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LRO55_RS13045 PF12833 Helix-turn-helix domain LRO55_RS13050 PF00171 Aldehyde dehydrogenase family LRO55_RS13055 PF06594 Haemolysin-type calcium binding protein related domain LRO55_RS13055 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) LRO55_RS13090 PF00324 Amino acid permease LRO55_RS13095 PF04958 Arginine N-succinyltransferase beta subunit LRO55_RS13100 PF00202 Aminotransferase class-III LRO55_RS13110 PF00171 Aldehyde dehydrogenase family LRO55_RS13120 PF07729 FCD domain LRO55_RS13120 PF00392 Bacterial regulatory proteins, gntR family LRO55_RS13130 PF00324 Amino acid permease LRO55_RS13135 PF01266 FAD dependent oxidoreductase LRO55_RS13140 PF00324 Amino acid permease LRO55_RS13165 PF13296 Putative type VI secretion system Rhs element Vgr LRO55_RS13165 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) LRO55_RS13165 PF04717 Type VI secretion system, phage-baseplate injector LRO55_RS13170 PF00440 Bacterial regulatory proteins, tetR family LRO55_RS13170 PF14278 Transcriptional regulator C-terminal region LRO55_RS13180 PF05987 Bacterial protein of unknown function (DUF898) LRO55_RS13195 PF01494 FAD binding domain LRO55_RS13240 PF07992 Pyridine nucleotide-disulphide oxidoreductase LRO55_RS13240 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LRO55_RS13250 PF00764 Arginosuccinate synthase LRO55_RS13255 PF01590 GAF domain LRO55_RS13255 PF00990 Diguanylate cyclase, GGDEF domain LRO55_RS13255 PF00563 EAL domain LRO55_RS13255 PF00360 Phytochrome region LRO55_RS13260 PF01979 Amidohydrolase family LRO55_RS13265 PF00929 Exonuclease LRO55_RS13275 PF00593 TonB dependent receptor LRO55_RS13275 PF07715 TonB-dependent Receptor Plug Domain LRO55_RS13295 PF07992 Pyridine nucleotide-disulphide oxidoreductase LRO55_RS13295 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LRO55_RS13300 PF00005 ABC transporter LRO55_RS13300 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LRO55_RS13305 PF12911 N-terminal TM domain of oligopeptide transport permease C LRO55_RS13305 PF00528 Binding-protein-dependent transport system inner membrane component LRO55_RS13310 PF00528 Binding-protein-dependent transport system inner membrane component LRO55_RS13315 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LRO55_RS13320 PF01476 LysM domain LRO55_RS13320 PF01476 LysM domain LRO55_RS13320 PF01464 Transglycosylase SLT domain LRO55_RS13320 PF01464 Transglycosylase SLT domain LRO55_RS13325 PF00929 Exonuclease LRO55_RS13335 PF00293 NUDIX domain LRO55_RS13335 PF09297 NADH pyrophosphatase zinc ribbon domain LRO55_RS13345 PF04972 BON domain LRO55_RS13350 PF02021 Uncharacterised protein family UPF0102 LRO55_RS13355 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LRO55_RS13365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS13365 PF03466 LysR substrate binding domain LRO55_RS13370 PF01810 LysE type translocator LRO55_RS13380 PF13411 MerR HTH family regulatory protein LRO55_RS13390 PF01494 FAD binding domain LRO55_RS13395 PF01494 FAD binding domain LRO55_RS13400 PF05195 Aminopeptidase P, N-terminal domain LRO55_RS13400 PF00557 Metallopeptidase family M24 LRO55_RS13440 PF01812 5-formyltetrahydrofolate cyclo-ligase family LRO55_RS13445 PF05362 Lon protease (S16) C-terminal proteolytic domain LRO55_RS13445 PF00004 ATPase family associated with various cellular activities (AAA) LRO55_RS13445 PF02190 ATP-dependent protease La (LON) substrate-binding domain LRO55_RS13450 PF02590 Predicted SPOUT methyltransferase LRO55_RS13455 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LRO55_RS13465 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LRO55_RS13465 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LRO55_RS13470 PF04060 Putative Fe-S cluster LRO55_RS13475 PF10576 Iron-sulfur binding domain of endonuclease III LRO55_RS13475 PF00633 Helix-hairpin-helix motif LRO55_RS13475 PF00730 HhH-GPD superfamily base excision DNA repair protein LRO55_RS13485 PF05191 Adenylate kinase, active site lid LRO55_RS13500 PF03717 Penicillin-binding Protein dimerisation domain LRO55_RS13500 PF00905 Penicillin binding protein transpeptidase domain LRO55_RS13515 PF02492 CobW/HypB/UreG, nucleotide-binding domain LRO55_RS13520 PF01730 UreF LRO55_RS13525 PF02814 UreE urease accessory protein, N-terminal domain LRO55_RS13525 PF05194 UreE urease accessory protein, C-terminal domain LRO55_RS13530 PF00449 Urease alpha-subunit, N-terminal domain LRO55_RS13530 PF01979 Amidohydrolase family LRO55_RS13535 PF00699 Urease beta subunit LRO55_RS13540 PF00547 Urease, gamma subunit LRO55_RS13545 PF01774 UreD urease accessory protein LRO55_RS13555 PF17185 NlpE C-terminal OB domain LRO55_RS13555 PF04170 NlpE N-terminal domain LRO55_RS13560 PF00463 Isocitrate lyase family LRO55_RS13565 PF03466 LysR substrate binding domain LRO55_RS13565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS13570 PF00571 CBS domain LRO55_RS13570 PF03471 Transporter associated domain LRO55_RS13570 PF01595 Cyclin M transmembrane N-terminal domain LRO55_RS13575 PF03600 Citrate transporter LRO55_RS13590 PF00009 Elongation factor Tu GTP binding domain LRO55_RS13595 PF01507 Phosphoadenosine phosphosulfate reductase family LRO55_RS13605 PF14052 Capsule assembly protein Wzi LRO55_RS13610 PF01336 OB-fold nucleic acid binding domain LRO55_RS13610 PF00152 tRNA synthetases class II (D, K and N) LRO55_RS13625 PF00301 Rubredoxin LRO55_RS13630 PF18113 Rubredoxin binding C-terminal domain LRO55_RS13630 PF07992 Pyridine nucleotide-disulphide oxidoreductase LRO55_RS13635 PF00561 alpha/beta hydrolase fold LRO55_RS13640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS13640 PF03466 LysR substrate binding domain LRO55_RS13655 PF02503 Polyphosphate kinase middle domain LRO55_RS13655 PF13090 Polyphosphate kinase C-terminal domain 2 LRO55_RS13655 PF13089 Polyphosphate kinase N-terminal domain LRO55_RS13655 PF17941 Polyphosphate kinase C-terminal domain 1 LRO55_RS13660 PF00912 Transglycosylase LRO55_RS13665 PF01694 Rhomboid family LRO55_RS13675 PF00005 ABC transporter LRO55_RS13680 PF13472 GDSL-like Lipase/Acylhydrolase family LRO55_RS13685 PF00484 Carbonic anhydrase LRO55_RS13690 PF00561 alpha/beta hydrolase fold LRO55_RS13700 PF00593 TonB dependent receptor LRO55_RS13700 PF07715 TonB-dependent Receptor Plug Domain LRO55_RS13705 PF01521 Iron-sulphur cluster biosynthesis LRO55_RS13705 PF01106 NifU-like domain LRO55_RS13715 PF00884 Sulfatase LRO55_RS13720 PF03781 Sulfatase-modifying factor enzyme 1 LRO55_RS13735 PF00291 Pyridoxal-phosphate dependent enzyme LRO55_RS13740 PF01384 Phosphate transporter family LRO55_RS13745 PF02310 B12 binding domain LRO55_RS13745 PF02607 B12 binding domain LRO55_RS13745 PF02965 Vitamin B12 dependent methionine synthase, activation domain LRO55_RS13745 PF00809 Pterin binding enzyme LRO55_RS13745 PF02574 Homocysteine S-methyltransferase LRO55_RS13760 PF02780 Transketolase, C-terminal domain LRO55_RS13760 PF02779 Transketolase, pyrimidine binding domain LRO55_RS13765 PF00456 Transketolase, thiamine diphosphate binding domain LRO55_RS13770 PF07690 Major Facilitator Superfamily LRO55_RS13780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS13780 PF03466 LysR substrate binding domain LRO55_RS13790 PF01263 Aldose 1-epimerase LRO55_RS13795 PF07690 Major Facilitator Superfamily LRO55_RS13805 PF04960 Glutaminase LRO55_RS13810 PF01327 Polypeptide deformylase LRO55_RS13815 PF07690 Major Facilitator Superfamily LRO55_RS13825 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LRO55_RS13825 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LRO55_RS13825 PF00205 Thiamine pyrophosphate enzyme, central domain LRO55_RS13830 PF00171 Aldehyde dehydrogenase family LRO55_RS13835 PF01958 Domain of unknown function DUF108 LRO55_RS13835 PF03447 Homoserine dehydrogenase, NAD binding domain LRO55_RS13845 PF12697 Alpha/beta hydrolase family LRO55_RS13855 PF07690 Major Facilitator Superfamily LRO55_RS13860 PF14759 Reductase C-terminal LRO55_RS13860 PF07992 Pyridine nucleotide-disulphide oxidoreductase LRO55_RS13865 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LRO55_RS13875 PF00355 Rieske [2Fe-2S] domain LRO55_RS13885 PF00355 Rieske [2Fe-2S] domain LRO55_RS13890 PF01614 Bacterial transcriptional regulator LRO55_RS13890 PF09339 IclR helix-turn-helix domain LRO55_RS13910 PF00378 Enoyl-CoA hydratase/isomerase LRO55_RS13920 PF00440 Bacterial regulatory proteins, tetR family LRO55_RS13930 PF00535 Glycosyl transferase family 2 LRO55_RS13935 PF14883 Hypothetical glycosyl hydrolase family 13 LRO55_RS13935 PF01522 Polysaccharide deacetylase LRO55_RS13940 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LRO55_RS13945 PF07152 YaeQ protein LRO55_RS13950 PF00375 Sodium:dicarboxylate symporter family LRO55_RS13955 PF02492 CobW/HypB/UreG, nucleotide-binding domain LRO55_RS13955 PF07683 Cobalamin synthesis protein cobW C-terminal domain LRO55_RS13965 PF03061 Thioesterase superfamily LRO55_RS13975 PF02028 BCCT, betaine/carnitine/choline family transporter LRO55_RS13980 PF02028 BCCT, betaine/carnitine/choline family transporter LRO55_RS13985 PF13977 BetI-type transcriptional repressor, C-terminal LRO55_RS13985 PF00440 Bacterial regulatory proteins, tetR family LRO55_RS13990 PF00171 Aldehyde dehydrogenase family LRO55_RS13995 PF00732 GMC oxidoreductase LRO55_RS13995 PF05199 GMC oxidoreductase LRO55_RS14000 PF06039 Malate:quinone oxidoreductase (Mqo) LRO55_RS14010 PF02574 Homocysteine S-methyltransferase LRO55_RS14015 PF13520 Amino acid permease LRO55_RS14035 PF00873 AcrB/AcrD/AcrF family LRO55_RS14040 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LRO55_RS14045 PF02321 Outer membrane efflux protein LRO55_RS14060 PF00701 Dihydrodipicolinate synthetase family LRO55_RS14065 PF00083 Sugar (and other) transporter LRO55_RS14095 PF18019 HD domain LRO55_RS14115 PF09615 CRISPR-associated protein (Cas_Csy3) LRO55_RS14125 PF01867 CRISPR associated protein Cas1 LRO55_RS14140 PF07690 Major Facilitator Superfamily LRO55_RS14145 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LRO55_RS14145 PF00529 HlyD membrane-fusion protein of T1SS LRO55_RS14150 PF03061 Thioesterase superfamily LRO55_RS14155 PF00490 Delta-aminolevulinic acid dehydratase LRO55_RS14160 PF01266 FAD dependent oxidoreductase LRO55_RS14165 PF08338 Domain of unknown function (DUF1731) LRO55_RS14165 PF01370 NAD dependent epimerase/dehydratase family LRO55_RS14185 PF12320 Type 5 capsule protein repressor C-terminal domain LRO55_RS14185 PF00149 Calcineurin-like phosphoesterase LRO55_RS14195 PF01168 Alanine racemase, N-terminal domain LRO55_RS14200 PF00437 Type II/IV secretion system protein LRO55_RS14205 PF00437 Type II/IV secretion system protein LRO55_RS14210 PF01475 Ferric uptake regulator family LRO55_RS14215 PF04355 SmpA / OmlA family LRO55_RS14220 PF03658 RnfH family Ubiquitin LRO55_RS14230 PF01814 Hemerythrin HHE cation binding domain LRO55_RS14235 PF13230 Glutamine amidotransferases class-II LRO55_RS14245 PF00696 Amino acid kinase family LRO55_RS14250 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LRO55_RS14250 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LRO55_RS14250 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LRO55_RS14250 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LRO55_RS14255 PF00692 dUTPase LRO55_RS14260 PF00580 UvrD/REP helicase N-terminal domain LRO55_RS14260 PF13361 UvrD-like helicase C-terminal domain LRO55_RS14265 PF13488 Glycine zipper LRO55_RS14265 PF00691 OmpA family LRO55_RS14270 PF01553 Acyltransferase LRO55_RS14280 PF03775 Septum formation inhibitor MinC, C-terminal domain LRO55_RS14285 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LRO55_RS14290 PF03776 Septum formation topological specificity factor MinE LRO55_RS14305 PF01810 LysE type translocator LRO55_RS14310 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LRO55_RS14310 PF01580 FtsK/SpoIIIE family LRO55_RS14310 PF09397 Ftsk gamma domain LRO55_RS14310 PF17854 FtsK alpha domain LRO55_RS14315 PF07992 Pyridine nucleotide-disulphide oxidoreductase LRO55_RS14325 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LRO55_RS14330 PF04377 Arginine-tRNA-protein transferase, C terminus LRO55_RS14330 PF04376 Arginine-tRNA-protein transferase, N terminus LRO55_RS14335 PF00583 Acetyltransferase (GNAT) family LRO55_RS14350 PF00009 Elongation factor Tu GTP binding domain LRO55_RS14350 PF03144 Elongation factor Tu domain 2 LRO55_RS14350 PF03143 Elongation factor Tu C-terminal domain LRO55_RS14355 PF00679 Elongation factor G C-terminus LRO55_RS14355 PF14492 Elongation Factor G, domain II LRO55_RS14355 PF03764 Elongation factor G, domain IV LRO55_RS14355 PF00009 Elongation factor Tu GTP binding domain LRO55_RS14355 PF03144 Elongation factor Tu domain 2 LRO55_RS14360 PF00177 Ribosomal protein S7p/S5e LRO55_RS14365 PF00164 Ribosomal protein S12/S23 LRO55_RS14375 PF02801 Beta-ketoacyl synthase, C-terminal domain LRO55_RS14375 PF00109 Beta-ketoacyl synthase, N-terminal domain LRO55_RS14380 PF03653 Uncharacterised protein family (UPF0093) LRO55_RS14390 PF02540 NAD synthase LRO55_RS14390 PF00795 Carbon-nitrogen hydrolase LRO55_RS14420 PF00037 4Fe-4S binding domain LRO55_RS14425 PF01467 Cytidylyltransferase-like LRO55_RS14430 PF01668 SmpB protein LRO55_RS14440 PF03358 NADPH-dependent FMN reductase LRO55_RS14445 PF02578 Multi-copper polyphenol oxidoreductase laccase LRO55_RS14450 PF00849 RNA pseudouridylate synthase LRO55_RS14450 PF01479 S4 domain LRO55_RS14455 PF13525 Outer membrane lipoprotein LRO55_RS14460 PF01807 CHC2 zinc finger LRO55_RS14460 PF08278 DNA primase DnaG DnaB-binding LRO55_RS14460 PF10410 DnaB-helicase binding domain of primase LRO55_RS14460 PF08275 DNA primase catalytic core, N-terminal domain LRO55_RS14465 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LRO55_RS14465 PF01488 Shikimate / quinate 5-dehydrogenase LRO55_RS14465 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LRO55_RS14475 PF03550 Outer membrane lipoprotein LolB LRO55_RS14480 PF08544 GHMP kinases C terminal LRO55_RS14480 PF00288 GHMP kinases N terminal domain LRO55_RS14505 PF14572 Phosphoribosyl synthetase-associated domain LRO55_RS14505 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LRO55_RS14510 PF01386 Ribosomal L25p family LRO55_RS14515 PF01195 Peptidyl-tRNA hydrolase LRO55_RS14520 PF02261 Aspartate decarboxylase LRO55_RS14535 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LRO55_RS14540 PF13419 Haloacid dehalogenase-like hydrolase LRO55_RS14545 PF03070 TENA/THI-4/PQQC family LRO55_RS14545 PF02581 Thiamine monophosphate synthase LRO55_RS14545 PF08543 Phosphomethylpyrimidine kinase LRO55_RS14550 PF01476 LysM domain LRO55_RS14550 PF04972 BON domain LRO55_RS14555 PF00550 Phosphopantetheine attachment site LRO55_RS14565 PF00698 Acyl transferase domain LRO55_RS14570 PF01783 Ribosomal L32p protein family LRO55_RS14575 PF02620 Large ribosomal RNA subunit accumulation protein YceD LRO55_RS14580 PF04315 Elongation factor P hydroxylase LRO55_RS14585 PF01300 Telomere recombination LRO55_RS14590 PF02616 Segregation and condensation protein ScpA LRO55_RS14595 PF04079 Segregation and condensation complex subunit ScpB LRO55_RS14600 PF00849 RNA pseudouridylate synthase LRO55_RS14600 PF01479 S4 domain LRO55_RS14615 PF00155 Aminotransferase class I and II LRO55_RS14620 PF00202 Aminotransferase class-III LRO55_RS14620 PF06968 Biotin and Thiamin Synthesis associated domain LRO55_RS14620 PF04055 Radical SAM superfamily LRO55_RS14625 PF12697 Alpha/beta hydrolase family LRO55_RS14625 PF08241 Methyltransferase domain LRO55_RS14630 PF02358 Trehalose-phosphatase LRO55_RS14635 PF00982 Glycosyltransferase family 20 LRO55_RS14640 PF07690 Major Facilitator Superfamily LRO55_RS14645 PF00210 Ferritin-like domain LRO55_RS14650 PF00533 BRCA1 C Terminus (BRCT) domain LRO55_RS14650 PF01653 NAD-dependent DNA ligase adenylation domain LRO55_RS14650 PF03120 NAD-dependent DNA ligase OB-fold domain LRO55_RS14650 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LRO55_RS14650 PF12826 Helix-hairpin-helix motif LRO55_RS14660 PF02463 RecF/RecN/SMC N terminal domain LRO55_RS14660 PF06470 SMC proteins Flexible Hinge Domain LRO55_RS14670 PF01925 Sulfite exporter TauE/SafE LRO55_RS14680 PF03309 Type III pantothenate kinase LRO55_RS14685 PF00448 SRP54-type protein, GTPase domain LRO55_RS14685 PF02881 SRP54-type protein, helical bundle domain LRO55_RS14685 PF02978 Signal peptide binding domain LRO55_RS14695 PF01207 Dihydrouridine synthase (Dus) LRO55_RS14725 PF00692 dUTPase LRO55_RS14740 PF01048 Phosphorylase superfamily LRO55_RS14745 PF10609 NUBPL iron-transfer P-loop NTPase LRO55_RS14760 PF09334 tRNA synthetases class I (M) LRO55_RS14760 PF01588 Putative tRNA binding domain LRO55_RS14790 PF13533 Biotin-lipoyl like LRO55_RS14795 PF00291 Pyridoxal-phosphate dependent enzyme LRO55_RS14810 PF05552 Conserved TM helix LRO55_RS14825 PF00175 Oxidoreductase NAD-binding domain LRO55_RS14825 PF00970 Oxidoreductase FAD-binding domain LRO55_RS14830 PF03466 LysR substrate binding domain LRO55_RS14830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS14850 PF00361 Proton-conducting membrane transporter LRO55_RS14855 PF00361 Proton-conducting membrane transporter LRO55_RS14860 PF00361 Proton-conducting membrane transporter LRO55_RS14860 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LRO55_RS14865 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LRO55_RS14870 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LRO55_RS14875 PF12838 4Fe-4S dicluster domain LRO55_RS14880 PF00146 NADH dehydrogenase LRO55_RS14885 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LRO55_RS14885 PF00384 Molybdopterin oxidoreductase LRO55_RS14885 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LRO55_RS14890 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LRO55_RS14890 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LRO55_RS14890 PF10531 SLBB domain LRO55_RS14900 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LRO55_RS14900 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LRO55_RS14905 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LRO55_RS14910 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LRO55_RS14915 PF00990 Diguanylate cyclase, GGDEF domain LRO55_RS14925 PF00672 HAMP domain LRO55_RS14925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRO55_RS14925 PF00512 His Kinase A (phospho-acceptor) domain LRO55_RS14930 PF00486 Transcriptional regulatory protein, C terminal LRO55_RS14930 PF00072 Response regulator receiver domain LRO55_RS14940 PF03477 ATP cone domain LRO55_RS14940 PF02867 Ribonucleotide reductase, barrel domain LRO55_RS14940 PF00317 Ribonucleotide reductase, all-alpha domain LRO55_RS14950 PF00268 Ribonucleotide reductase, small chain LRO55_RS14955 PF01062 Bestrophin, RFP-TM, chloride channel LRO55_RS14960 PF02634 FdhD/NarQ family LRO55_RS14965 PF00384 Molybdopterin oxidoreductase LRO55_RS14970 PF02391 MoaE protein LRO55_RS14980 PF12804 MobA-like NTP transferase domain LRO55_RS14985 PF00994 Probable molybdopterin binding domain LRO55_RS14985 PF03454 MoeA C-terminal region (domain IV) LRO55_RS14985 PF03453 MoeA N-terminal region (domain I and II) LRO55_RS14990 PF00994 Probable molybdopterin binding domain LRO55_RS14990 PF01967 MoaC family LRO55_RS14995 PF04055 Radical SAM superfamily LRO55_RS14995 PF06463 Molybdenum Cofactor Synthesis C LRO55_RS15005 PF02322 Cytochrome bd terminal oxidase subunit II LRO55_RS15010 PF01654 Cytochrome bd terminal oxidase subunit I LRO55_RS15020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS15020 PF03466 LysR substrate binding domain LRO55_RS15025 PF01042 Endoribonuclease L-PSP LRO55_RS15040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS15040 PF03466 LysR substrate binding domain LRO55_RS15045 PF08892 YqcI/YcgG family LRO55_RS15065 PF00440 Bacterial regulatory proteins, tetR family LRO55_RS15085 PF13419 Haloacid dehalogenase-like hydrolase LRO55_RS15090 PF12897 Alanine-glyoxylate amino-transferase LRO55_RS15095 PF00440 Bacterial regulatory proteins, tetR family LRO55_RS15100 PF01613 Flavin reductase like domain LRO55_RS15105 PF08267 Cobalamin-independent synthase, N-terminal domain LRO55_RS15105 PF01717 Cobalamin-independent synthase, Catalytic domain LRO55_RS15115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS15115 PF03466 LysR substrate binding domain LRO55_RS15120 PF01810 LysE type translocator LRO55_RS15130 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LRO55_RS15130 PF12833 Helix-turn-helix domain LRO55_RS15135 PF07687 Peptidase dimerisation domain LRO55_RS15135 PF01546 Peptidase family M20/M25/M40 LRO55_RS15145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS15145 PF03466 LysR substrate binding domain LRO55_RS15150 PF07690 Major Facilitator Superfamily LRO55_RS15160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS15160 PF03466 LysR substrate binding domain LRO55_RS15165 PF14537 Cytochrome c3 LRO55_RS15165 PF00890 FAD binding domain LRO55_RS15180 PF17932 Tetracyclin repressor-like, C-terminal domain LRO55_RS15180 PF00440 Bacterial regulatory proteins, tetR family LRO55_RS15190 PF02515 CoA-transferase family III LRO55_RS15195 PF07690 Major Facilitator Superfamily LRO55_RS15200 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LRO55_RS15200 PF02770 Acyl-CoA dehydrogenase, middle domain LRO55_RS15200 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LRO55_RS15205 PF03466 LysR substrate binding domain LRO55_RS15205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS15210 PF08240 Alcohol dehydrogenase GroES-like domain LRO55_RS15210 PF00107 Zinc-binding dehydrogenase LRO55_RS15215 PF00962 Adenosine/AMP deaminase LRO55_RS15240 PF02445 Quinolinate synthetase A protein LRO55_RS15245 PF01960 ArgJ family LRO55_RS15250 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LRO55_RS15250 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LRO55_RS15255 PF00893 Small Multidrug Resistance protein LRO55_RS15265 PF05275 Copper resistance protein B precursor (CopB) LRO55_RS15270 PF07732 Multicopper oxidase LRO55_RS15270 PF07731 Multicopper oxidase LRO55_RS15270 PF00394 Multicopper oxidase LRO55_RS15285 PF00834 Ribulose-phosphate 3 epimerase family LRO55_RS15295 PF00756 Putative esterase LRO55_RS15305 PF04445 Putative SAM-dependent methyltransferase LRO55_RS15310 PF00814 Glycoprotease family LRO55_RS15315 PF00132 Bacterial transferase hexapeptide (six repeats) LRO55_RS15320 PF00293 NUDIX domain LRO55_RS15355 PF01476 LysM domain LRO55_RS15355 PF00005 ABC transporter LRO55_RS15360 PF04715 Anthranilate synthase component I, N terminal region LRO55_RS15360 PF00425 chorismate binding enzyme LRO55_RS15365 PF00155 Aminotransferase class I and II LRO55_RS15370 PF00815 Histidinol dehydrogenase LRO55_RS15375 PF01634 ATP phosphoribosyltransferase LRO55_RS15380 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LRO55_RS15385 PF01722 BolA-like protein LRO55_RS15390 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LRO55_RS15395 PF00309 Sigma-54 factor, Activator interacting domain (AID) LRO55_RS15395 PF04963 Sigma-54 factor, core binding domain LRO55_RS15395 PF04552 Sigma-54, DNA binding domain LRO55_RS15440 PF00795 Carbon-nitrogen hydrolase LRO55_RS15450 PF01047 MarR family LRO55_RS15455 PF02566 OsmC-like protein LRO55_RS15460 PF00437 Type II/IV secretion system protein LRO55_RS15480 PF01612 3'-5' exonuclease LRO55_RS15480 PF00476 DNA polymerase family A LRO55_RS15480 PF01367 5'-3' exonuclease, C-terminal SAM fold LRO55_RS15480 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LRO55_RS15485 PF02325 YGGT family LRO55_RS15490 PF03807 NADP oxidoreductase coenzyme F420-dependent LRO55_RS15490 PF14748 Pyrroline-5-carboxylate reductase dimerisation LRO55_RS15495 PF01171 PP-loop family LRO55_RS15495 PF11734 TilS substrate C-terminal domain LRO55_RS15495 PF09179 TilS substrate binding domain LRO55_RS15500 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LRO55_RS15505 PF02541 Ppx/GppA phosphatase family LRO55_RS15510 PF00085 Thioredoxin LRO55_RS15515 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LRO55_RS15515 PF07498 Rho termination factor, N-terminal domain LRO55_RS15515 PF07497 Rho termination factor, RNA-binding domain LRO55_RS15530 PF00216 Bacterial DNA-binding protein LRO55_RS15535 PF03483 B3/4 domain LRO55_RS15535 PF03484 tRNA synthetase B5 domain LRO55_RS15535 PF03147 Ferredoxin-fold anticodon binding domain LRO55_RS15535 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LRO55_RS15535 PF01588 Putative tRNA binding domain LRO55_RS15540 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LRO55_RS15540 PF01409 tRNA synthetases class II core domain (F) LRO55_RS15560 PF00453 Ribosomal protein L20 LRO55_RS15565 PF01632 Ribosomal protein L35 LRO55_RS15570 PF07690 Major Facilitator Superfamily LRO55_RS15575 PF09335 SNARE associated Golgi protein LRO55_RS15580 PF02798 Glutathione S-transferase, N-terminal domain LRO55_RS15580 PF00043 Glutathione S-transferase, C-terminal domain LRO55_RS15585 PF00707 Translation initiation factor IF-3, C-terminal domain LRO55_RS15585 PF05198 Translation initiation factor IF-3, N-terminal domain LRO55_RS15590 PF03129 Anticodon binding domain LRO55_RS15590 PF02824 TGS domain LRO55_RS15590 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LRO55_RS15590 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LRO55_RS15595 PF00501 AMP-binding enzyme LRO55_RS15595 PF13193 AMP-binding enzyme C-terminal domain LRO55_RS15600 PF04751 Protein of unknown function (DUF615) LRO55_RS15605 PF00381 PTS HPr component phosphorylation site LRO55_RS15610 PF03668 P-loop ATPase protein family LRO55_RS15615 PF02569 Pantoate-beta-alanine ligase LRO55_RS15620 PF02548 Ketopantoate hydroxymethyltransferase LRO55_RS15625 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LRO55_RS15630 PF12626 Polymerase A arginine-rich C-terminus LRO55_RS15630 PF12627 Probable RNA and SrmB- binding site of polymerase A LRO55_RS15630 PF01743 Poly A polymerase head domain LRO55_RS15640 PF03819 MazG nucleotide pyrophosphohydrolase domain LRO55_RS15650 PF13291 ACT domain LRO55_RS15650 PF04607 Region found in RelA / SpoT proteins LRO55_RS15650 PF02824 TGS domain LRO55_RS15655 PF05958 tRNA (Uracil-5-)-methyltransferase LRO55_RS15665 PF00291 Pyridoxal-phosphate dependent enzyme LRO55_RS15670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRO55_RS15670 PF00672 HAMP domain LRO55_RS15670 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LRO55_RS15670 PF01627 Hpt domain LRO55_RS15670 PF00512 His Kinase A (phospho-acceptor) domain LRO55_RS15670 PF00072 Response regulator receiver domain LRO55_RS15675 PF00378 Enoyl-CoA hydratase/isomerase LRO55_RS15680 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LRO55_RS15680 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LRO55_RS15685 PF01261 Xylose isomerase-like TIM barrel LRO55_RS15695 PF00106 short chain dehydrogenase LRO55_RS15700 PF02233 NAD(P) transhydrogenase beta subunit LRO55_RS15705 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch LRO55_RS15710 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LRO55_RS15710 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LRO55_RS15715 PF00892 EamA-like transporter family LRO55_RS15725 PF07690 Major Facilitator Superfamily LRO55_RS15730 PF01207 Dihydrouridine synthase (Dus) LRO55_RS15745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS15745 PF03466 LysR substrate binding domain LRO55_RS15755 PF00899 ThiF family LRO55_RS15760 PF00330 Aconitase family (aconitate hydratase) LRO55_RS15760 PF00694 Aconitase C-terminal domain LRO55_RS15765 PF01026 TatD related DNase LRO55_RS15780 PF03144 Elongation factor Tu domain 2 LRO55_RS15780 PF00009 Elongation factor Tu GTP binding domain LRO55_RS15780 PF16658 Class II release factor RF3, C-terminal domain LRO55_RS15800 PF03707 Bacterial signalling protein N terminal repeat LRO55_RS15800 PF00990 Diguanylate cyclase, GGDEF domain LRO55_RS15800 PF00563 EAL domain LRO55_RS15805 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LRO55_RS15805 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LRO55_RS15810 PF10369 Small subunit of acetolactate synthase LRO55_RS15815 PF00205 Thiamine pyrophosphate enzyme, central domain LRO55_RS15815 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LRO55_RS15815 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LRO55_RS15820 PF00133 tRNA synthetases class I (I, L, M and V) LRO55_RS15820 PF08264 Anticodon-binding domain of tRNA LRO55_RS15820 PF09334 tRNA synthetases class I (M) LRO55_RS15820 PF13603 Leucyl-tRNA synthetase, Domain 2 LRO55_RS15835 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LRO55_RS15840 PF02687 FtsX-like permease family LRO55_RS15840 PF12704 MacB-like periplasmic core domain LRO55_RS15840 PF00005 ABC transporter LRO55_RS15845 PF02321 Outer membrane efflux protein LRO55_RS15870 PF00929 Exonuclease LRO55_RS15875 PF03193 RsgA GTPase LRO55_RS15885 PF00462 Glutaredoxin LRO55_RS15890 PF02556 Preprotein translocase subunit SecB LRO55_RS15905 PF00109 Beta-ketoacyl synthase, N-terminal domain LRO55_RS15905 PF02801 Beta-ketoacyl synthase, C-terminal domain LRO55_RS15920 PF02801 Beta-ketoacyl synthase, C-terminal domain LRO55_RS15920 PF00109 Beta-ketoacyl synthase, N-terminal domain LRO55_RS15930 PF04820 Tryptophan halogenase LRO55_RS15950 PF00221 Aromatic amino acid lyase LRO55_RS15965 PF00501 AMP-binding enzyme LRO55_RS15965 PF13193 AMP-binding enzyme C-terminal domain LRO55_RS15975 PF00550 Phosphopantetheine attachment site LRO55_RS15980 PF00550 Phosphopantetheine attachment site LRO55_RS15995 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LRO55_RS15995 PF01926 50S ribosome-binding GTPase LRO55_RS16000 PF01011 PQQ enzyme repeat LRO55_RS16000 PF13360 PQQ-like domain LRO55_RS16010 PF03129 Anticodon binding domain LRO55_RS16010 PF13393 Histidyl-tRNA synthetase LRO55_RS16015 PF04551 GcpE protein LRO55_RS16020 PF13464 Domain of unknown function (DUF4115) LRO55_RS16030 PF04055 Radical SAM superfamily LRO55_RS16035 PF00334 Nucleoside diphosphate kinase LRO55_RS16040 PF04384 Iron-sulphur cluster assembly LRO55_RS16045 PF01569 PAP2 superfamily LRO55_RS16050 PF13439 Glycosyltransferase Family 4 LRO55_RS16050 PF00534 Glycosyl transferases group 1 LRO55_RS16055 PF17804 Tail specific protease N-terminal domain LRO55_RS16055 PF03572 Peptidase family S41 LRO55_RS16055 PF11818 C-terminal domain of tail specific protease (DUF3340) LRO55_RS16055 PF00595 PDZ domain LRO55_RS16060 PF00933 Glycosyl hydrolase family 3 N terminal domain LRO55_RS16070 PF00561 alpha/beta hydrolase fold LRO55_RS16075 PF00171 Aldehyde dehydrogenase family LRO55_RS16080 PF00171 Aldehyde dehydrogenase family LRO55_RS16085 PF01202 Shikimate kinase LRO55_RS16090 PF02447 GntP family permease LRO55_RS16095 PF01081 KDPG and KHG aldolase LRO55_RS16100 PF00920 Dehydratase family LRO55_RS16110 PF00871 Acetokinase family LRO55_RS16115 PF01515 Phosphate acetyl/butaryl transferase LRO55_RS16115 PF07085 DRTGG domain LRO55_RS16120 PF05683 Fumarase C-terminus LRO55_RS16120 PF05681 Fumarate hydratase (Fumerase) LRO55_RS16135 PF07724 AAA domain (Cdc48 subfamily) LRO55_RS16135 PF10431 C-terminal, D2-small domain, of ClpB protein LRO55_RS16135 PF06689 ClpX C4-type zinc finger LRO55_RS16140 PF00574 Clp protease LRO55_RS16145 PF05697 Bacterial trigger factor protein (TF) LRO55_RS16145 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LRO55_RS16145 PF05698 Bacterial trigger factor protein (TF) C-terminus LRO55_RS16150 PF07715 TonB-dependent Receptor Plug Domain LRO55_RS16150 PF00593 TonB dependent receptor LRO55_RS16155 PF13640 2OG-Fe(II) oxygenase superfamily LRO55_RS16155 PF18331 PKHD-type hydroxylase C-terminal domain LRO55_RS16160 PF00682 HMGL-like LRO55_RS16160 PF08502 LeuA allosteric (dimerisation) domain LRO55_RS16165 PF00561 alpha/beta hydrolase fold LRO55_RS16170 PF07021 Methionine biosynthesis protein MetW LRO55_RS16170 PF00561 alpha/beta hydrolase fold LRO55_RS16180 PF01725 Ham1 family LRO55_RS16190 PF02416 mttA/Hcf106 family LRO55_RS16195 PF02416 mttA/Hcf106 family LRO55_RS16200 PF00902 Sec-independent protein translocase protein (TatC) LRO55_RS16220 PF01790 Prolipoprotein diacylglyceryl transferase LRO55_RS16235 PF00303 Thymidylate synthase LRO55_RS16240 PF00186 Dihydrofolate reductase LRO55_RS16250 PF01625 Peptide methionine sulfoxide reductase LRO55_RS16255 PF02472 Biopolymer transport protein ExbD/TolR LRO55_RS16260 PF01618 MotA/TolQ/ExbB proton channel family LRO55_RS16270 PF00551 Formyl transferase LRO55_RS16270 PF01842 ACT domain LRO55_RS16280 PF00171 Aldehyde dehydrogenase family LRO55_RS16285 PF00830 Ribosomal L28 family LRO55_RS16290 PF00471 Ribosomal protein L33 LRO55_RS16295 PF00999 Sodium/hydrogen exchanger family LRO55_RS16295 PF02254 TrkA-N domain LRO55_RS16315 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) LRO55_RS16320 PF00580 UvrD/REP helicase N-terminal domain LRO55_RS16320 PF13361 UvrD-like helicase C-terminal domain LRO55_RS16335 PF08272 Topoisomerase I zinc-ribbon-like LRO55_RS16335 PF01131 DNA topoisomerase LRO55_RS16335 PF01751 Toprim domain LRO55_RS16335 PF01396 Topoisomerase DNA binding C4 zinc finger LRO55_RS16345 PF01638 HxlR-like helix-turn-helix LRO55_RS16350 PF08240 Alcohol dehydrogenase GroES-like domain LRO55_RS16350 PF00107 Zinc-binding dehydrogenase LRO55_RS16355 PF04102 SlyX LRO55_RS16360 PF00005 ABC transporter LRO55_RS16360 PF16326 ABC transporter C-terminal domain LRO55_RS16360 PF12848 ABC transporter LRO55_RS16370 PF03279 Bacterial lipid A biosynthesis acyltransferase LRO55_RS16380 PF00375 Sodium:dicarboxylate symporter family LRO55_RS16390 PF01118 Semialdehyde dehydrogenase, NAD binding domain LRO55_RS16390 PF02774 Semialdehyde dehydrogenase, dimerisation domain LRO55_RS16410 PF01416 tRNA pseudouridine synthase LRO55_RS16420 PF01176 Translation initiation factor 1A / IF-1 LRO55_RS16435 PF00180 Isocitrate/isopropylmalate dehydrogenase LRO55_RS16445 PF00694 Aconitase C-terminal domain LRO55_RS16450 PF00330 Aconitase family (aconitate hydratase) LRO55_RS16460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS16460 PF03466 LysR substrate binding domain LRO55_RS16485 PF00293 NUDIX domain LRO55_RS16490 PF05524 PEP-utilising enzyme, N-terminal LRO55_RS16490 PF00391 PEP-utilising enzyme, mobile domain LRO55_RS16490 PF01590 GAF domain LRO55_RS16490 PF02896 PEP-utilising enzyme, TIM barrel domain LRO55_RS16495 PF00141 Peroxidase LRO55_RS16500 PF12706 Beta-lactamase superfamily domain LRO55_RS16505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS16505 PF03466 LysR substrate binding domain LRO55_RS16515 PF02798 Glutathione S-transferase, N-terminal domain LRO55_RS16520 PF08279 HTH domain LRO55_RS16520 PF13280 WYL domain LRO55_RS16530 PF00849 RNA pseudouridylate synthase LRO55_RS16530 PF01479 S4 domain LRO55_RS16535 PF00575 S1 RNA binding domain LRO55_RS16535 PF12111 Polyribonucleotide phosphorylase C terminal LRO55_RS16535 PF10150 Ribonuclease E/G family LRO55_RS16540 PF00501 AMP-binding enzyme LRO55_RS16540 PF13193 AMP-binding enzyme C-terminal domain LRO55_RS16555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS16555 PF03466 LysR substrate binding domain LRO55_RS16565 PF06969 HemN C-terminal domain LRO55_RS16565 PF04055 Radical SAM superfamily LRO55_RS16575 PF01554 MatE LRO55_RS16580 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LRO55_RS16580 PF02770 Acyl-CoA dehydrogenase, middle domain LRO55_RS16580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LRO55_RS16585 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LRO55_RS16585 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LRO55_RS16590 PF03109 ABC1 family LRO55_RS16595 PF01197 Ribosomal protein L31 LRO55_RS16605 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LRO55_RS16615 PF07992 Pyridine nucleotide-disulphide oxidoreductase LRO55_RS16615 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LRO55_RS16625 PF03884 DNA gyrase inhibitor YacG LRO55_RS16630 PF00753 Metallo-beta-lactamase superfamily LRO55_RS16635 PF00762 Ferrochelatase LRO55_RS16645 PF01177 Asp/Glu/Hydantoin racemase LRO55_RS16665 PF01206 Sulfurtransferase TusA LRO55_RS16670 PF00571 CBS domain LRO55_RS16670 PF03471 Transporter associated domain LRO55_RS16675 PF00795 Carbon-nitrogen hydrolase LRO55_RS16680 PF01588 Putative tRNA binding domain LRO55_RS16695 PF08334 Type II secretion system (T2SS), protein G LRO55_RS16695 PF07963 Prokaryotic N-terminal methylation motif LRO55_RS16700 PF00482 Type II secretion system (T2SS), protein F LRO55_RS16705 PF00271 Helicase conserved C-terminal domain LRO55_RS16705 PF18074 Primosomal protein N C-terminal domain LRO55_RS16705 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LRO55_RS16705 PF17764 3′ DNA-binding domain (3′BD) LRO55_RS16705 PF00270 DEAD/DEAH box helicase LRO55_RS16710 PF02254 TrkA-N domain LRO55_RS16710 PF00999 Sodium/hydrogen exchanger family LRO55_RS16715 PF01430 Hsp33 protein LRO55_RS16725 PF01556 DnaJ C terminal domain LRO55_RS16725 PF00226 DnaJ domain LRO55_RS16735 PF01544 CorA-like Mg2+ transporter protein LRO55_RS16740 PF03725 3' exoribonuclease family, domain 2 LRO55_RS16740 PF00013 KH domain LRO55_RS16740 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LRO55_RS16740 PF01138 3' exoribonuclease family, domain 1 LRO55_RS16740 PF00575 S1 RNA binding domain LRO55_RS16745 PF00312 Ribosomal protein S15 LRO55_RS16750 PF00144 Beta-lactamase LRO55_RS16755 PF13538 UvrD-like helicase C-terminal domain LRO55_RS16760 PF12705 PD-(D/E)XK nuclease superfamily LRO55_RS16760 PF13361 UvrD-like helicase C-terminal domain LRO55_RS16760 PF00580 UvrD/REP helicase N-terminal domain LRO55_RS16765 PF17946 RecC C-terminal domain LRO55_RS16775 PF03976 Polyphosphate kinase 2 (PPK2) LRO55_RS16785 PF01209 ubiE/COQ5 methyltransferase family LRO55_RS16795 PF03109 ABC1 family LRO55_RS16800 PF01494 FAD binding domain LRO55_RS16805 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LRO55_RS16810 PF01502 Phosphoribosyl-AMP cyclohydrolase LRO55_RS16825 PF13244 Domain of unknown function (DUF4040) LRO55_RS16825 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter LRO55_RS16825 PF00361 Proton-conducting membrane transporter LRO55_RS16825 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LRO55_RS16830 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LRO55_RS16835 PF00361 Proton-conducting membrane transporter LRO55_RS16840 PF01899 Na+/H+ ion antiporter subunit LRO55_RS16845 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) LRO55_RS16850 PF03334 Na+/H+ antiporter subunit LRO55_RS16855 PF02033 Ribosome-binding factor A LRO55_RS16860 PF04760 Translation initiation factor IF-2, N-terminal region LRO55_RS16860 PF00009 Elongation factor Tu GTP binding domain LRO55_RS16860 PF11987 Translation-initiation factor 2 LRO55_RS16860 PF08364 Bacterial translation initiation factor IF-2 associated region LRO55_RS16865 PF08529 NusA N-terminal domain LRO55_RS16865 PF00575 S1 RNA binding domain LRO55_RS16865 PF13184 NusA-like KH domain LRO55_RS16870 PF02576 RimP N-terminal domain LRO55_RS16870 PF17384 RimP C-terminal SH3 domain LRO55_RS16890 PF03840 Preprotein translocase SecG subunit LRO55_RS16895 PF00121 Triosephosphate isomerase LRO55_RS16900 PF00437 Type II/IV secretion system protein LRO55_RS16900 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LRO55_RS16905 PF00482 Type II secretion system (T2SS), protein F LRO55_RS16920 PF01121 Dephospho-CoA kinase LRO55_RS16930 PF08032 RNA 2'-O ribose methyltransferase substrate binding LRO55_RS16930 PF00588 SpoU rRNA Methylase family LRO55_RS16935 PF06865 Pyrimidine/purine nucleoside phosphorylase LRO55_RS16945 PF02463 RecF/RecN/SMC N terminal domain LRO55_RS16950 PF02622 Uncharacterized ACR, COG1678 LRO55_RS16955 PF03652 Holliday junction resolvase LRO55_RS16960 PF13533 Biotin-lipoyl like LRO55_RS16990 PF02805 Metal binding domain of Ada LRO55_RS16990 PF12833 Helix-turn-helix domain LRO55_RS16990 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LRO55_RS16990 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LRO55_RS17000 PF01066 CDP-alcohol phosphatidyltransferase LRO55_RS17010 PF08459 UvrC Helix-hairpin-helix N-terminal LRO55_RS17010 PF02151 UvrB/uvrC motif LRO55_RS17010 PF01541 GIY-YIG catalytic domain LRO55_RS17040 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LRO55_RS17040 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LRO55_RS17040 PF00378 Enoyl-CoA hydratase/isomerase LRO55_RS17045 PF02803 Thiolase, C-terminal domain LRO55_RS17045 PF00108 Thiolase, N-terminal domain LRO55_RS17060 PF00376 MerR family regulatory protein LRO55_RS17060 PF09278 MerR, DNA binding LRO55_RS17070 PF01323 DSBA-like thioredoxin domain LRO55_RS17085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRO55_RS17085 PF00183 Hsp90 protein LRO55_RS17100 PF13726 Na+-H+ antiporter family LRO55_RS17100 PF03553 Na+/H+ antiporter family LRO55_RS17125 PF04998 RNA polymerase Rpb1, domain 5 LRO55_RS17125 PF05000 RNA polymerase Rpb1, domain 4 LRO55_RS17125 PF04983 RNA polymerase Rpb1, domain 3 LRO55_RS17125 PF04997 RNA polymerase Rpb1, domain 1 LRO55_RS17125 PF00623 RNA polymerase Rpb1, domain 2 LRO55_RS17130 PF04563 RNA polymerase beta subunit LRO55_RS17130 PF04561 RNA polymerase Rpb2, domain 2 LRO55_RS17130 PF04565 RNA polymerase Rpb2, domain 3 LRO55_RS17130 PF10385 RNA polymerase beta subunit external 1 domain LRO55_RS17130 PF00562 RNA polymerase Rpb2, domain 6 LRO55_RS17130 PF04560 RNA polymerase Rpb2, domain 7 LRO55_RS17135 PF16320 Ribosomal protein L7/L12 dimerisation domain LRO55_RS17135 PF00542 Ribosomal protein L7/L12 C-terminal domain LRO55_RS17140 PF00466 Ribosomal protein L10 LRO55_RS17145 PF00687 Ribosomal protein L1p/L10e family LRO55_RS17150 PF00298 Ribosomal protein L11, RNA binding domain LRO55_RS17150 PF03946 Ribosomal protein L11, N-terminal domain LRO55_RS17155 PF00467 KOW motif LRO55_RS17155 PF02357 Transcription termination factor nusG LRO55_RS17160 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LRO55_RS17170 PF03143 Elongation factor Tu C-terminal domain LRO55_RS17170 PF03144 Elongation factor Tu domain 2 LRO55_RS17170 PF00009 Elongation factor Tu GTP binding domain LRO55_RS17195 PF00425 chorismate binding enzyme LRO55_RS17195 PF04715 Anthranilate synthase component I, N terminal region LRO55_RS17200 PF13419 Haloacid dehalogenase-like hydrolase LRO55_RS17205 PF12401 Protein of unknown function (DUF2662) LRO55_RS17205 PF00498 FHA domain LRO55_RS17210 PF03958 Bacterial type II/III secretion system short domain LRO55_RS17210 PF00263 Bacterial type II and III secretion system protein LRO55_RS17225 PF00816 H-NS histone family LRO55_RS17250 PF03900 Porphobilinogen deaminase, C-terminal domain LRO55_RS17250 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LRO55_RS17255 PF04397 LytTr DNA-binding domain LRO55_RS17255 PF00072 Response regulator receiver domain LRO55_RS17260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRO55_RS17260 PF07694 5TMR of 5TMR-LYT LRO55_RS17260 PF06580 Histidine kinase LRO55_RS17265 PF14698 Argininosuccinate lyase C-terminal LRO55_RS17265 PF00206 Lyase LRO55_RS17270 PF04362 Bacterial Fe(2+) trafficking LRO55_RS17275 PF01895 PhoU domain LRO55_RS17280 PF02321 Outer membrane efflux protein LRO55_RS17305 PF01964 Radical SAM ThiC family LRO55_RS17305 PF13667 ThiC-associated domain LRO55_RS17310 PF00293 NUDIX domain LRO55_RS17315 PF00149 Calcineurin-like phosphoesterase LRO55_RS17320 PF01258 Prokaryotic dksA/traR C4-type zinc finger LRO55_RS17325 PF00749 tRNA synthetases class I (E and Q), catalytic domain LRO55_RS17330 PF01098 Cell cycle protein LRO55_RS17335 PF02875 Mur ligase family, glutamate ligase domain LRO55_RS17335 PF08245 Mur ligase middle domain LRO55_RS17345 PF07664 Ferrous iron transport protein B C terminus LRO55_RS17345 PF02421 Ferrous iron transport protein B LRO55_RS17345 PF07670 Nucleoside recognition LRO55_RS17355 PF02899 Phage integrase, N-terminal SAM-like domain LRO55_RS17355 PF00589 Phage integrase family LRO55_RS17360 PF10411 Disulfide bond isomerase protein N-terminus LRO55_RS17360 PF13098 Thioredoxin-like domain LRO55_RS17365 PF01842 ACT domain LRO55_RS17365 PF00742 Homoserine dehydrogenase LRO55_RS17365 PF03447 Homoserine dehydrogenase, NAD binding domain LRO55_RS17370 PF00291 Pyridoxal-phosphate dependent enzyme LRO55_RS17375 PF00768 D-alanyl-D-alanine carboxypeptidase LRO55_RS17380 PF00196 Bacterial regulatory proteins, luxR family LRO55_RS17380 PF00072 Response regulator receiver domain LRO55_RS17385 PF00512 His Kinase A (phospho-acceptor) domain LRO55_RS17385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRO55_RS17390 PF00072 Response regulator receiver domain LRO55_RS17390 PF00158 Sigma-54 interaction domain LRO55_RS17390 PF02954 Bacterial regulatory protein, Fis family LRO55_RS17395 PF00595 PDZ domain LRO55_RS17395 PF03572 Peptidase family S41 LRO55_RS17400 PF06415 BPG-independent PGAM N-terminus (iPGM_N) LRO55_RS17400 PF01676 Metalloenzyme superfamily LRO55_RS17405 PF03739 Lipopolysaccharide export system permease LptF/LptG LRO55_RS17415 PF00883 Cytosol aminopeptidase family, catalytic domain LRO55_RS17415 PF02789 Cytosol aminopeptidase family, N-terminal domain LRO55_RS17435 PF00677 Lumazine binding domain LRO55_RS17445 PF01872 RibD C-terminal domain LRO55_RS17445 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LRO55_RS17450 PF03477 ATP cone domain LRO55_RS17455 PF00909 Ammonium Transporter Family LRO55_RS17460 PF00543 Nitrogen regulatory protein P-II LRO55_RS17480 PF00293 NUDIX domain LRO55_RS17495 PF00303 Thymidylate synthase LRO55_RS17515 PF11426 Tn7 transposition regulator TnsC LRO55_RS17515 PF13401 AAA domain LRO55_RS17535 PF03358 NADPH-dependent FMN reductase LRO55_RS17540 PF00155 Aminotransferase class I and II LRO55_RS17540 PF00392 Bacterial regulatory proteins, gntR family LRO55_RS17545 PF00596 Class II Aldolase and Adducin N-terminal domain LRO55_RS17550 PF00701 Dihydrodipicolinate synthetase family LRO55_RS17565 PF03573 outer membrane porin, OprD family LRO55_RS17570 PF00719 Inorganic pyrophosphatase LRO55_RS17585 PF13193 AMP-binding enzyme C-terminal domain LRO55_RS17585 PF00501 AMP-binding enzyme LRO55_RS17590 PF00521 DNA gyrase/topoisomerase IV, subunit A LRO55_RS17590 PF03989 DNA gyrase C-terminal domain, beta-propeller LRO55_RS17595 PF07690 Major Facilitator Superfamily LRO55_RS17600 PF03458 UPF0126 domain LRO55_RS17605 PF02810 SEC-C motif LRO55_RS17610 PF03471 Transporter associated domain LRO55_RS17610 PF03741 Integral membrane protein TerC family LRO55_RS17615 PF03641 Possible lysine decarboxylase LRO55_RS17620 PF07690 Major Facilitator Superfamily LRO55_RS17625 PF01183 Glycosyl hydrolases family 25 LRO55_RS17630 PF00817 impB/mucB/samB family LRO55_RS17630 PF11799 impB/mucB/samB family C-terminal domain LRO55_RS17630 PF11798 IMS family HHH motif LRO55_RS17645 PF11842 Domain of unknown function (DUF3362) LRO55_RS17645 PF04055 Radical SAM superfamily LRO55_RS17645 PF08497 Radical SAM N-terminal LRO55_RS17655 PF13411 MerR HTH family regulatory protein LRO55_RS17665 PF03358 NADPH-dependent FMN reductase LRO55_RS17680 PF00291 Pyridoxal-phosphate dependent enzyme LRO55_RS17740 PF01327 Polypeptide deformylase LRO55_RS17750 PF02481 DNA recombination-mediator protein A LRO55_RS17750 PF17782 DprA winged helix domain LRO55_RS17755 PF01300 Telomere recombination LRO55_RS17760 PF00892 EamA-like transporter family LRO55_RS17765 PF00440 Bacterial regulatory proteins, tetR family LRO55_RS17770 PF07690 Major Facilitator Superfamily LRO55_RS17780 PF00255 Glutathione peroxidase LRO55_RS17790 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LRO55_RS17795 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LRO55_RS17795 PF02874 ATP synthase alpha/beta family, beta-barrel domain LRO55_RS17800 PF00231 ATP synthase LRO55_RS17805 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LRO55_RS17805 PF00306 ATP synthase alpha/beta chain, C terminal domain LRO55_RS17805 PF02874 ATP synthase alpha/beta family, beta-barrel domain LRO55_RS17810 PF00213 ATP synthase delta (OSCP) subunit LRO55_RS17815 PF00430 ATP synthase B/B' CF(0) LRO55_RS17820 PF00137 ATP synthase subunit C LRO55_RS17825 PF00119 ATP synthase A chain LRO55_RS17845 PF00005 ABC transporter LRO55_RS17850 PF00950 ABC 3 transport family LRO55_RS17855 PF01810 LysE type translocator LRO55_RS17860 PF04261 Dyp-type peroxidase family LRO55_RS17865 PF03949 Malic enzyme, NAD binding domain LRO55_RS17865 PF00390 Malic enzyme, N-terminal domain LRO55_RS17870 PF05746 DALR anticodon binding domain LRO55_RS17870 PF03485 Arginyl tRNA synthetase N terminal domain LRO55_RS17870 PF00750 tRNA synthetases class I (R) LRO55_RS17890 PF05726 Pirin C-terminal cupin domain LRO55_RS17890 PF02678 Pirin LRO55_RS17900 PF01475 Ferric uptake regulator family LRO55_RS17905 PF03551 Transcriptional regulator PadR-like family LRO55_RS17915 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LRO55_RS17915 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LRO55_RS17920 PF00117 Glutamine amidotransferase class-I LRO55_RS17920 PF00958 GMP synthase C terminal domain LRO55_RS17920 PF02540 NAD synthase LRO55_RS17925 PF04286 Protein of unknown function (DUF445) LRO55_RS17930 PF07681 DoxX LRO55_RS17935 PF09335 SNARE associated Golgi protein LRO55_RS17950 PF13614 AAA domain LRO55_RS17960 PF01722 BolA-like protein LRO55_RS17975 PF01648 4'-phosphopantetheinyl transferase superfamily LRO55_RS17980 PF16363 GDP-mannose 4,6 dehydratase LRO55_RS17995 PF00668 Condensation domain LRO55_RS17995 PF00550 Phosphopantetheine attachment site LRO55_RS17995 PF00975 Thioesterase domain LRO55_RS17995 PF00501 AMP-binding enzyme LRO55_RS17995 PF13193 AMP-binding enzyme C-terminal domain LRO55_RS18000 PF00501 AMP-binding enzyme LRO55_RS18000 PF13193 AMP-binding enzyme C-terminal domain LRO55_RS18000 PF00668 Condensation domain LRO55_RS18000 PF00109 Beta-ketoacyl synthase, N-terminal domain LRO55_RS18000 PF02801 Beta-ketoacyl synthase, C-terminal domain LRO55_RS18000 PF08659 KR domain LRO55_RS18000 PF00550 Phosphopantetheine attachment site LRO55_RS18000 PF14765 Polyketide synthase dehydratase LRO55_RS18000 PF16197 Ketoacyl-synthetase C-terminal extension LRO55_RS18005 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LRO55_RS18005 PF02770 Acyl-CoA dehydrogenase, middle domain LRO55_RS18005 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LRO55_RS18010 PF00501 AMP-binding enzyme LRO55_RS18015 PF00196 Bacterial regulatory proteins, luxR family LRO55_RS18015 PF03472 Autoinducer binding domain LRO55_RS18025 PF00765 Autoinducer synthase LRO55_RS18030 PF00083 Sugar (and other) transporter LRO55_RS18030 PF07690 Major Facilitator Superfamily LRO55_RS18035 PF00378 Enoyl-CoA hydratase/isomerase LRO55_RS18040 PF00378 Enoyl-CoA hydratase/isomerase LRO55_RS18045 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LRO55_RS18045 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LRO55_RS18045 PF02770 Acyl-CoA dehydrogenase, middle domain LRO55_RS18050 PF00501 AMP-binding enzyme LRO55_RS18050 PF13193 AMP-binding enzyme C-terminal domain LRO55_RS18055 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LRO55_RS18055 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LRO55_RS18060 PF00171 Aldehyde dehydrogenase family LRO55_RS18070 PF00324 Amino acid permease LRO55_RS18075 PF00324 Amino acid permease LRO55_RS18080 PF01042 Endoribonuclease L-PSP LRO55_RS18085 PF00842 Alanine racemase, C-terminal domain LRO55_RS18085 PF01168 Alanine racemase, N-terminal domain LRO55_RS18090 PF01266 FAD dependent oxidoreductase LRO55_RS18095 PF01037 Lrp/AsnC ligand binding domain LRO55_RS18105 PF00593 TonB dependent receptor LRO55_RS18105 PF07715 TonB-dependent Receptor Plug Domain LRO55_RS18120 PF00849 RNA pseudouridylate synthase LRO55_RS18160 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) LRO55_RS18160 PF13296 Putative type VI secretion system Rhs element Vgr LRO55_RS18160 PF04717 Type VI secretion system, phage-baseplate injector LRO55_RS18225 PF07729 FCD domain LRO55_RS18225 PF00392 Bacterial regulatory proteins, gntR family LRO55_RS18245 PF00392 Bacterial regulatory proteins, gntR family LRO55_RS18245 PF07729 FCD domain LRO55_RS18260 PF16363 GDP-mannose 4,6 dehydratase LRO55_RS18265 PF00342 Phosphoglucose isomerase LRO55_RS18270 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LRO55_RS18270 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LRO55_RS18270 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LRO55_RS18275 PF00483 Nucleotidyl transferase LRO55_RS18285 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LRO55_RS18290 PF00132 Bacterial transferase hexapeptide (six repeats) LRO55_RS18290 PF17836 PglD N-terminal domain LRO55_RS18290 PF14602 Hexapeptide repeat of succinyl-transferase LRO55_RS18295 PF02397 Bacterial sugar transferase LRO55_RS18325 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LRO55_RS18325 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LRO55_RS18350 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LRO55_RS18350 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LRO55_RS18350 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LRO55_RS18355 PF02350 UDP-N-acetylglucosamine 2-epimerase LRO55_RS18360 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LRO55_RS18360 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LRO55_RS18360 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LRO55_RS18365 PF18412 Outer-membrane lipoprotein Wza C-terminal domain LRO55_RS18365 PF02563 Polysaccharide biosynthesis/export protein LRO55_RS18365 PF10531 SLBB domain LRO55_RS18370 PF01451 Low molecular weight phosphotyrosine protein phosphatase LRO55_RS18375 PF02706 Chain length determinant protein LRO55_RS18375 PF13807 G-rich domain on putative tyrosine kinase LRO55_RS18375 PF13614 AAA domain LRO55_RS18380 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LRO55_RS18380 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LRO55_RS18385 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LRO55_RS18385 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LRO55_RS18390 PF03023 Lipid II flippase MurJ LRO55_RS18395 PF01510 N-acetylmuramoyl-L-alanine amidase LRO55_RS18400 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LRO55_RS18400 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LRO55_RS18410 PF04185 Phosphoesterase family LRO55_RS18410 PF05506 Domain of unknown function (DUF756) LRO55_RS18415 PF03725 3' exoribonuclease family, domain 2 LRO55_RS18415 PF01138 3' exoribonuclease family, domain 1 LRO55_RS18420 PF00487 Fatty acid desaturase LRO55_RS18425 PF00175 Oxidoreductase NAD-binding domain LRO55_RS18430 PF00440 Bacterial regulatory proteins, tetR family LRO55_RS18435 PF00440 Bacterial regulatory proteins, tetR family LRO55_RS18435 PF08360 QacR-like protein, C-terminal region LRO55_RS18440 PF01323 DSBA-like thioredoxin domain LRO55_RS18450 PF13419 Haloacid dehalogenase-like hydrolase LRO55_RS18455 PF00106 short chain dehydrogenase LRO55_RS18470 PF00696 Amino acid kinase family LRO55_RS18470 PF00583 Acetyltransferase (GNAT) family LRO55_RS18475 PF09084 NMT1/THI5 like LRO55_RS18480 PF09084 NMT1/THI5 like LRO55_RS18485 PF00296 Luciferase-like monooxygenase LRO55_RS18490 PF00528 Binding-protein-dependent transport system inner membrane component LRO55_RS18495 PF00005 ABC transporter LRO55_RS18500 PF00440 Bacterial regulatory proteins, tetR family LRO55_RS18500 PF08362 YcdC-like protein, C-terminal region LRO55_RS18505 PF01048 Phosphorylase superfamily LRO55_RS18515 PF06574 FAD synthetase LRO55_RS18515 PF01687 Riboflavin kinase LRO55_RS18520 PF06827 Zinc finger found in FPG and IleRS LRO55_RS18520 PF08264 Anticodon-binding domain of tRNA LRO55_RS18520 PF00133 tRNA synthetases class I (I, L, M and V) LRO55_RS18525 PF01252 Signal peptidase (SPase) II LRO55_RS18530 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LRO55_RS18570 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LRO55_RS18575 PF07859 alpha/beta hydrolase fold LRO55_RS18595 PF03466 LysR substrate binding domain LRO55_RS18595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LRO55_RS18600 PF01025 GrpE LRO55_RS18605 PF00012 Hsp70 protein LRO55_RS18630 PF13406 Transglycosylase SLT domain LRO55_RS18635 PF02222 ATP-grasp domain LRO55_RS18635 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LRO55_RS18640 PF00731 AIR carboxylase LRO55_RS18650 PF01225 Mur ligase family, catalytic domain LRO55_RS18650 PF02875 Mur ligase family, glutamate ligase domain LRO55_RS18650 PF08245 Mur ligase middle domain LRO55_RS18660 PF01569 PAP2 superfamily LRO55_RS18665 PF03741 Integral membrane protein TerC family LRO55_RS18675 PF03738 Glutathionylspermidine synthase preATP-grasp LRO55_RS18680 PF00355 Rieske [2Fe-2S] domain LRO55_RS18685 PF01979 Amidohydrolase family LRO55_RS18690 PF00156 Phosphoribosyl transferase domain LRO55_RS18700 PF10411 Disulfide bond isomerase protein N-terminus LRO55_RS18700 PF13098 Thioredoxin-like domain LRO55_RS18705 PF01545 Cation efflux family LRO55_RS18705 PF16916 Dimerisation domain of Zinc Transporter LRO55_RS18710 PF02583 Metal-sensitive transcriptional repressor LRO55_RS18715 PF01926 50S ribosome-binding GTPase LRO55_RS18715 PF12631 MnmE helical domain LRO55_RS18715 PF10396 GTP-binding protein TrmE N-terminus LRO55_RS18720 PF02096 60Kd inner membrane protein LRO55_RS18720 PF14849 YidC periplasmic domain LRO55_RS18725 PF01809 Putative membrane protein insertion efficiency factor LRO55_RS18730 PF00825 Ribonuclease P LRO55_RS18735 PF00468 Ribosomal protein L34 LRO55_RS18755 PF06750 Bacterial Peptidase A24 N-terminal domain LRO55_RS18755 PF01478 Type IV leader peptidase family