locus-tag class description BUM88_RS00015 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BUM88_RS00020 PF01252 Signal peptidase (SPase) II BUM88_RS00025 PF06827 Zinc finger found in FPG and IleRS BUM88_RS00025 PF08264 Anticodon-binding domain of tRNA BUM88_RS00025 PF00133 tRNA synthetases class I (I, L, M and V) BUM88_RS00030 PF06574 FAD synthetase BUM88_RS00030 PF01687 Riboflavin kinase BUM88_RS00040 PF01048 Phosphorylase superfamily BUM88_RS00045 PF08362 YcdC-like protein, C-terminal region BUM88_RS00045 PF00440 Bacterial regulatory proteins, tetR family BUM88_RS00050 PF00005 ABC transporter BUM88_RS00055 PF00528 Binding-protein-dependent transport system inner membrane component BUM88_RS00060 PF00296 Luciferase-like monooxygenase BUM88_RS00065 PF09084 NMT1/THI5 like BUM88_RS00070 PF09084 NMT1/THI5 like BUM88_RS00075 PF00696 Amino acid kinase family BUM88_RS00075 PF00583 Acetyltransferase (GNAT) family BUM88_RS00090 PF00106 short chain dehydrogenase BUM88_RS00095 PF13419 Haloacid dehalogenase-like hydrolase BUM88_RS00105 PF01323 DSBA-like thioredoxin domain BUM88_RS00110 PF08360 QacR-like protein, C-terminal region BUM88_RS00110 PF00440 Bacterial regulatory proteins, tetR family BUM88_RS00115 PF00440 Bacterial regulatory proteins, tetR family BUM88_RS00120 PF00175 Oxidoreductase NAD-binding domain BUM88_RS00125 PF00487 Fatty acid desaturase BUM88_RS00130 PF01138 3' exoribonuclease family, domain 1 BUM88_RS00130 PF03725 3' exoribonuclease family, domain 2 BUM88_RS00140 PF05506 Domain of unknown function (DUF756) BUM88_RS00140 PF04185 Phosphoesterase family BUM88_RS00150 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BUM88_RS00150 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BUM88_RS00155 PF01510 N-acetylmuramoyl-L-alanine amidase BUM88_RS00160 PF03023 Lipid II flippase MurJ BUM88_RS00165 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BUM88_RS00165 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BUM88_RS00170 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BUM88_RS00170 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BUM88_RS00175 PF13614 AAA domain BUM88_RS00175 PF13807 G-rich domain on putative tyrosine kinase BUM88_RS00175 PF02706 Chain length determinant protein BUM88_RS00180 PF01451 Low molecular weight phosphotyrosine protein phosphatase BUM88_RS00185 PF02563 Polysaccharide biosynthesis/export protein BUM88_RS00185 PF18412 Outer-membrane lipoprotein Wza C-terminal domain BUM88_RS00185 PF10531 SLBB domain BUM88_RS00190 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BUM88_RS00190 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BUM88_RS00190 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BUM88_RS00195 PF02350 UDP-N-acetylglucosamine 2-epimerase BUM88_RS00200 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BUM88_RS00200 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BUM88_RS00200 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BUM88_RS00225 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BUM88_RS00225 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BUM88_RS00240 PF02397 Bacterial sugar transferase BUM88_RS00245 PF00132 Bacterial transferase hexapeptide (six repeats) BUM88_RS00245 PF17836 PglD N-terminal domain BUM88_RS00245 PF14602 Hexapeptide repeat of succinyl-transferase BUM88_RS00250 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BUM88_RS00255 PF02719 Polysaccharide biosynthesis protein BUM88_RS00260 PF00483 Nucleotidyl transferase BUM88_RS00265 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BUM88_RS00265 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BUM88_RS00265 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BUM88_RS00270 PF00342 Phosphoglucose isomerase BUM88_RS00275 PF16363 GDP-mannose 4,6 dehydratase BUM88_RS00280 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BUM88_RS00280 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BUM88_RS00280 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BUM88_RS00280 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BUM88_RS00285 PF02652 L-lactate permease BUM88_RS00290 PF00392 Bacterial regulatory proteins, gntR family BUM88_RS00290 PF07729 FCD domain BUM88_RS00295 PF01070 FMN-dependent dehydrogenase BUM88_RS00300 PF01565 FAD binding domain BUM88_RS00300 PF09330 D-lactate dehydrogenase, membrane binding BUM88_RS00305 PF00155 Aminotransferase class I and II BUM88_RS00310 PF00392 Bacterial regulatory proteins, gntR family BUM88_RS00310 PF07729 FCD domain BUM88_RS00320 PF00285 Citrate synthase, C-terminal domain BUM88_RS00325 PF00694 Aconitase C-terminal domain BUM88_RS00325 PF00330 Aconitase family (aconitate hydratase) BUM88_RS00360 PF00293 NUDIX domain BUM88_RS00385 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) BUM88_RS00385 PF04717 Type VI secretion system, phage-baseplate injector BUM88_RS00385 PF13296 Putative type VI secretion system Rhs element Vgr BUM88_RS00425 PF00849 RNA pseudouridylate synthase BUM88_RS00440 PF00593 TonB dependent receptor BUM88_RS00440 PF07715 TonB-dependent Receptor Plug Domain BUM88_RS00450 PF01037 Lrp/AsnC ligand binding domain BUM88_RS00455 PF01266 FAD dependent oxidoreductase BUM88_RS00460 PF01168 Alanine racemase, N-terminal domain BUM88_RS00460 PF00842 Alanine racemase, C-terminal domain BUM88_RS00465 PF01042 Endoribonuclease L-PSP BUM88_RS00470 PF00324 Amino acid permease BUM88_RS00475 PF00324 Amino acid permease BUM88_RS00485 PF00171 Aldehyde dehydrogenase family BUM88_RS00490 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BUM88_RS00490 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BUM88_RS00495 PF13193 AMP-binding enzyme C-terminal domain BUM88_RS00495 PF00501 AMP-binding enzyme BUM88_RS00500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BUM88_RS00500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BUM88_RS00500 PF02770 Acyl-CoA dehydrogenase, middle domain BUM88_RS00505 PF00378 Enoyl-CoA hydratase/isomerase BUM88_RS00510 PF00378 Enoyl-CoA hydratase/isomerase BUM88_RS00515 PF07690 Major Facilitator Superfamily BUM88_RS00515 PF00083 Sugar (and other) transporter BUM88_RS00520 PF00765 Autoinducer synthase BUM88_RS00530 PF00196 Bacterial regulatory proteins, luxR family BUM88_RS00530 PF03472 Autoinducer binding domain BUM88_RS00535 PF00501 AMP-binding enzyme BUM88_RS00540 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BUM88_RS00540 PF02770 Acyl-CoA dehydrogenase, middle domain BUM88_RS00540 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BUM88_RS00545 PF00109 Beta-ketoacyl synthase, N-terminal domain BUM88_RS00545 PF00501 AMP-binding enzyme BUM88_RS00545 PF14765 Polyketide synthase dehydratase BUM88_RS00545 PF13193 AMP-binding enzyme C-terminal domain BUM88_RS00545 PF00668 Condensation domain BUM88_RS00545 PF16197 Ketoacyl-synthetase C-terminal extension BUM88_RS00545 PF00550 Phosphopantetheine attachment site BUM88_RS00545 PF08659 KR domain BUM88_RS00545 PF02801 Beta-ketoacyl synthase, C-terminal domain BUM88_RS00550 PF00550 Phosphopantetheine attachment site BUM88_RS00550 PF13193 AMP-binding enzyme C-terminal domain BUM88_RS00550 PF00668 Condensation domain BUM88_RS00550 PF00501 AMP-binding enzyme BUM88_RS00550 PF00975 Thioesterase domain BUM88_RS00565 PF16363 GDP-mannose 4,6 dehydratase BUM88_RS00570 PF01648 4'-phosphopantetheinyl transferase superfamily BUM88_RS00580 PF01722 BolA-like protein BUM88_RS00590 PF13614 AAA domain BUM88_RS00605 PF09335 SNARE associated Golgi protein BUM88_RS00610 PF07681 DoxX BUM88_RS00615 PF04286 Protein of unknown function (DUF445) BUM88_RS00620 PF02540 NAD synthase BUM88_RS00620 PF00958 GMP synthase C terminal domain BUM88_RS00620 PF00117 Glutamine amidotransferase class-I BUM88_RS00625 PF03551 Transcriptional regulator PadR-like family BUM88_RS00630 PF01475 Ferric uptake regulator family BUM88_RS00640 PF02678 Pirin BUM88_RS00640 PF05726 Pirin C-terminal cupin domain BUM88_RS00660 PF00750 tRNA synthetases class I (R) BUM88_RS00660 PF03485 Arginyl tRNA synthetase N terminal domain BUM88_RS00660 PF05746 DALR anticodon binding domain BUM88_RS00665 PF03949 Malic enzyme, NAD binding domain BUM88_RS00665 PF00390 Malic enzyme, N-terminal domain BUM88_RS00670 PF04261 Dyp-type peroxidase family BUM88_RS00675 PF01810 LysE type translocator BUM88_RS00680 PF00950 ABC 3 transport family BUM88_RS00685 PF00005 ABC transporter BUM88_RS00705 PF00119 ATP synthase A chain BUM88_RS00710 PF00137 ATP synthase subunit C BUM88_RS00715 PF00430 ATP synthase B/B' CF(0) BUM88_RS00720 PF00213 ATP synthase delta (OSCP) subunit BUM88_RS00725 PF02874 ATP synthase alpha/beta family, beta-barrel domain BUM88_RS00725 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BUM88_RS00725 PF00306 ATP synthase alpha/beta chain, C terminal domain BUM88_RS00730 PF00231 ATP synthase BUM88_RS00735 PF02874 ATP synthase alpha/beta family, beta-barrel domain BUM88_RS00735 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BUM88_RS00740 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BUM88_RS00745 PF11008 Protein of unknown function (DUF2846) BUM88_RS00755 PF00255 Glutathione peroxidase BUM88_RS00765 PF07690 Major Facilitator Superfamily BUM88_RS00770 PF00440 Bacterial regulatory proteins, tetR family BUM88_RS00775 PF00892 EamA-like transporter family BUM88_RS00780 PF01300 Telomere recombination BUM88_RS00785 PF17782 DprA winged helix domain BUM88_RS00785 PF02481 DNA recombination-mediator protein A BUM88_RS00795 PF01327 Polypeptide deformylase BUM88_RS00820 PF00440 Bacterial regulatory proteins, tetR family BUM88_RS00855 PF00291 Pyridoxal-phosphate dependent enzyme BUM88_RS00880 PF13411 MerR HTH family regulatory protein BUM88_RS00890 PF08497 Radical SAM N-terminal BUM88_RS00890 PF04055 Radical SAM superfamily BUM88_RS00890 PF11842 Domain of unknown function (DUF3362) BUM88_RS00910 PF00817 impB/mucB/samB family BUM88_RS00910 PF11798 IMS family HHH motif BUM88_RS00910 PF11799 impB/mucB/samB family C-terminal domain BUM88_RS00915 PF01183 Glycosyl hydrolases family 25 BUM88_RS00920 PF07690 Major Facilitator Superfamily BUM88_RS00925 PF03641 Possible lysine decarboxylase BUM88_RS00930 PF03471 Transporter associated domain BUM88_RS00930 PF03741 Integral membrane protein TerC family BUM88_RS00935 PF02810 SEC-C motif BUM88_RS00940 PF03458 UPF0126 domain BUM88_RS00945 PF07690 Major Facilitator Superfamily BUM88_RS00950 PF03989 DNA gyrase C-terminal domain, beta-propeller BUM88_RS00950 PF00521 DNA gyrase/topoisomerase IV, subunit A BUM88_RS00955 PF13193 AMP-binding enzyme C-terminal domain BUM88_RS00955 PF00501 AMP-binding enzyme BUM88_RS00970 PF00719 Inorganic pyrophosphatase BUM88_RS00975 PF03573 outer membrane porin, OprD family BUM88_RS00995 PF03358 NADPH-dependent FMN reductase BUM88_RS01000 PF13335 Magnesium chelatase, subunit ChlI C-terminal BUM88_RS01000 PF01078 Magnesium chelatase, subunit ChlI BUM88_RS01010 PF00543 Nitrogen regulatory protein P-II BUM88_RS01015 PF00909 Ammonium Transporter Family BUM88_RS01020 PF03477 ATP cone domain BUM88_RS01025 PF01872 RibD C-terminal domain BUM88_RS01025 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BUM88_RS01035 PF00677 Lumazine binding domain BUM88_RS01055 PF02789 Cytosol aminopeptidase family, N-terminal domain BUM88_RS01055 PF00883 Cytosol aminopeptidase family, catalytic domain BUM88_RS01065 PF03739 Lipopolysaccharide export system permease LptF/LptG BUM88_RS01070 PF01676 Metalloenzyme superfamily BUM88_RS01070 PF06415 BPG-independent PGAM N-terminus (iPGM_N) BUM88_RS01075 PF00595 PDZ domain BUM88_RS01075 PF03572 Peptidase family S41 BUM88_RS01080 PF00158 Sigma-54 interaction domain BUM88_RS01080 PF00072 Response regulator receiver domain BUM88_RS01080 PF02954 Bacterial regulatory protein, Fis family BUM88_RS01085 PF00512 His Kinase A (phospho-acceptor) domain BUM88_RS01085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BUM88_RS01090 PF00196 Bacterial regulatory proteins, luxR family BUM88_RS01090 PF00072 Response regulator receiver domain BUM88_RS01095 PF00768 D-alanyl-D-alanine carboxypeptidase BUM88_RS01100 PF00291 Pyridoxal-phosphate dependent enzyme BUM88_RS01105 PF01842 ACT domain BUM88_RS01105 PF00742 Homoserine dehydrogenase BUM88_RS01105 PF03447 Homoserine dehydrogenase, NAD binding domain BUM88_RS01110 PF13098 Thioredoxin-like domain BUM88_RS01110 PF10411 Disulfide bond isomerase protein N-terminus BUM88_RS01115 PF00589 Phage integrase family BUM88_RS01115 PF02899 Phage integrase, N-terminal SAM-like domain BUM88_RS01125 PF07664 Ferrous iron transport protein B C terminus BUM88_RS01125 PF02421 Ferrous iron transport protein B BUM88_RS01125 PF07670 Nucleoside recognition BUM88_RS01135 PF02875 Mur ligase family, glutamate ligase domain BUM88_RS01135 PF08245 Mur ligase middle domain BUM88_RS01140 PF01098 Cell cycle protein BUM88_RS01145 PF00749 tRNA synthetases class I (E and Q), catalytic domain BUM88_RS01150 PF01258 Prokaryotic dksA/traR C4-type zinc finger BUM88_RS01155 PF00149 Calcineurin-like phosphoesterase BUM88_RS01160 PF00293 NUDIX domain BUM88_RS01165 PF13667 ThiC-associated domain BUM88_RS01165 PF01964 Radical SAM ThiC family BUM88_RS01190 PF02321 Outer membrane efflux protein BUM88_RS01195 PF01895 PhoU domain BUM88_RS01200 PF04362 Bacterial Fe(2+) trafficking BUM88_RS01205 PF14698 Argininosuccinate lyase C-terminal BUM88_RS01205 PF00206 Lyase BUM88_RS01210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BUM88_RS01210 PF07694 5TMR of 5TMR-LYT BUM88_RS01210 PF06580 Histidine kinase BUM88_RS01215 PF00072 Response regulator receiver domain BUM88_RS01215 PF04397 LytTr DNA-binding domain BUM88_RS01220 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BUM88_RS01220 PF03900 Porphobilinogen deaminase, C-terminal domain BUM88_RS01245 PF00816 H-NS histone family BUM88_RS01260 PF03958 Bacterial type II/III secretion system short domain BUM88_RS01260 PF00263 Bacterial type II and III secretion system protein BUM88_RS01265 PF00498 FHA domain BUM88_RS01265 PF12401 Protein of unknown function (DUF2662) BUM88_RS01270 PF13419 Haloacid dehalogenase-like hydrolase BUM88_RS01275 PF04715 Anthranilate synthase component I, N terminal region BUM88_RS01275 PF00425 chorismate binding enzyme BUM88_RS01300 PF03144 Elongation factor Tu domain 2 BUM88_RS01300 PF00009 Elongation factor Tu GTP binding domain BUM88_RS01300 PF03143 Elongation factor Tu C-terminal domain BUM88_RS01310 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BUM88_RS01315 PF00467 KOW motif BUM88_RS01315 PF02357 Transcription termination factor nusG BUM88_RS01320 PF00298 Ribosomal protein L11, RNA binding domain BUM88_RS01320 PF03946 Ribosomal protein L11, N-terminal domain BUM88_RS01325 PF00687 Ribosomal protein L1p/L10e family BUM88_RS01330 PF00466 Ribosomal protein L10 BUM88_RS01335 PF16320 Ribosomal protein L7/L12 dimerisation domain BUM88_RS01335 PF00542 Ribosomal protein L7/L12 C-terminal domain BUM88_RS01345 PF10385 RNA polymerase beta subunit external 1 domain BUM88_RS01345 PF00562 RNA polymerase Rpb2, domain 6 BUM88_RS01345 PF04561 RNA polymerase Rpb2, domain 2 BUM88_RS01345 PF04563 RNA polymerase beta subunit BUM88_RS01345 PF04560 RNA polymerase Rpb2, domain 7 BUM88_RS01345 PF04565 RNA polymerase Rpb2, domain 3 BUM88_RS01350 PF05000 RNA polymerase Rpb1, domain 4 BUM88_RS01350 PF04998 RNA polymerase Rpb1, domain 5 BUM88_RS01350 PF04983 RNA polymerase Rpb1, domain 3 BUM88_RS01350 PF00623 RNA polymerase Rpb1, domain 2 BUM88_RS01350 PF04997 RNA polymerase Rpb1, domain 1 BUM88_RS01375 PF13726 Na+-H+ antiporter family BUM88_RS01375 PF03553 Na+/H+ antiporter family BUM88_RS01390 PF00183 Hsp90 protein BUM88_RS01390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BUM88_RS01405 PF01323 DSBA-like thioredoxin domain BUM88_RS01415 PF09278 MerR, DNA binding BUM88_RS01415 PF00376 MerR family regulatory protein BUM88_RS01435 PF02803 Thiolase, C-terminal domain BUM88_RS01435 PF00108 Thiolase, N-terminal domain BUM88_RS01440 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BUM88_RS01440 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BUM88_RS01440 PF00378 Enoyl-CoA hydratase/isomerase BUM88_RS01475 PF08459 UvrC Helix-hairpin-helix N-terminal BUM88_RS01475 PF02151 UvrB/uvrC motif BUM88_RS01475 PF01541 GIY-YIG catalytic domain BUM88_RS01485 PF01066 CDP-alcohol phosphatidyltransferase BUM88_RS01490 PF02805 Metal binding domain of Ada BUM88_RS01490 PF12833 Helix-turn-helix domain BUM88_RS01490 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BUM88_RS01490 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BUM88_RS01520 PF13533 Biotin-lipoyl like BUM88_RS01525 PF03652 Holliday junction resolvase BUM88_RS01530 PF02622 Uncharacterized ACR, COG1678 BUM88_RS01535 PF02463 RecF/RecN/SMC N terminal domain BUM88_RS01545 PF06865 Pyrimidine/purine nucleoside phosphorylase BUM88_RS01550 PF00588 SpoU rRNA Methylase family BUM88_RS01550 PF08032 RNA 2'-O ribose methyltransferase substrate binding BUM88_RS01560 PF01121 Dephospho-CoA kinase BUM88_RS01565 PF06750 Bacterial Peptidase A24 N-terminal domain BUM88_RS01565 PF01478 Type IV leader peptidase family BUM88_RS01570 PF00482 Type II secretion system (T2SS), protein F BUM88_RS01575 PF00437 Type II/IV secretion system protein BUM88_RS01575 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BUM88_RS01580 PF00121 Triosephosphate isomerase BUM88_RS01585 PF03840 Preprotein translocase SecG subunit BUM88_RS01605 PF02576 RimP N-terminal domain BUM88_RS01605 PF17384 RimP C-terminal SH3 domain BUM88_RS01610 PF08529 NusA N-terminal domain BUM88_RS01610 PF00575 S1 RNA binding domain BUM88_RS01610 PF13184 NusA-like KH domain BUM88_RS01615 PF11987 Translation-initiation factor 2 BUM88_RS01615 PF08364 Bacterial translation initiation factor IF-2 associated region BUM88_RS01615 PF00009 Elongation factor Tu GTP binding domain BUM88_RS01615 PF04760 Translation initiation factor IF-2, N-terminal region BUM88_RS01620 PF02033 Ribosome-binding factor A BUM88_RS01625 PF03334 Na+/H+ antiporter subunit BUM88_RS01630 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) BUM88_RS01635 PF01899 Na+/H+ ion antiporter subunit BUM88_RS01640 PF00361 Proton-conducting membrane transporter BUM88_RS01645 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BUM88_RS01650 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BUM88_RS01650 PF00361 Proton-conducting membrane transporter BUM88_RS01650 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter BUM88_RS01650 PF13244 Domain of unknown function (DUF4040) BUM88_RS01665 PF01502 Phosphoribosyl-AMP cyclohydrolase BUM88_RS01675 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BUM88_RS01680 PF01494 FAD binding domain BUM88_RS01685 PF03109 ABC1 family BUM88_RS01695 PF01209 ubiE/COQ5 methyltransferase family BUM88_RS01705 PF03976 Polyphosphate kinase 2 (PPK2) BUM88_RS01715 PF17946 RecC C-terminal domain BUM88_RS01720 PF00580 UvrD/REP helicase N-terminal domain BUM88_RS01720 PF12705 PD-(D/E)XK nuclease superfamily BUM88_RS01720 PF13361 UvrD-like helicase C-terminal domain BUM88_RS01725 PF13538 UvrD-like helicase C-terminal domain BUM88_RS01730 PF00144 Beta-lactamase BUM88_RS01735 PF00312 Ribosomal protein S15 BUM88_RS01740 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BUM88_RS01740 PF00013 KH domain BUM88_RS01740 PF00575 S1 RNA binding domain BUM88_RS01740 PF01138 3' exoribonuclease family, domain 1 BUM88_RS01740 PF03725 3' exoribonuclease family, domain 2 BUM88_RS01745 PF01544 CorA-like Mg2+ transporter protein BUM88_RS01755 PF01556 DnaJ C terminal domain BUM88_RS01755 PF00226 DnaJ domain BUM88_RS01765 PF01430 Hsp33 protein BUM88_RS01770 PF00999 Sodium/hydrogen exchanger family BUM88_RS01770 PF02254 TrkA-N domain BUM88_RS01775 PF18074 Primosomal protein N C-terminal domain BUM88_RS01775 PF00270 DEAD/DEAH box helicase BUM88_RS01775 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BUM88_RS01775 PF00271 Helicase conserved C-terminal domain BUM88_RS01775 PF17764 3′ DNA-binding domain (3′BD) BUM88_RS01780 PF00482 Type II secretion system (T2SS), protein F BUM88_RS01785 PF08334 Type II secretion system (T2SS), protein G BUM88_RS01785 PF07963 Prokaryotic N-terminal methylation motif BUM88_RS01800 PF01588 Putative tRNA binding domain BUM88_RS01805 PF00795 Carbon-nitrogen hydrolase BUM88_RS01810 PF00571 CBS domain BUM88_RS01810 PF03471 Transporter associated domain BUM88_RS01815 PF01206 Sulfurtransferase TusA BUM88_RS01835 PF01177 Asp/Glu/Hydantoin racemase BUM88_RS01845 PF00762 Ferrochelatase BUM88_RS01850 PF00753 Metallo-beta-lactamase superfamily BUM88_RS01855 PF03884 DNA gyrase inhibitor YacG BUM88_RS01865 PF07992 Pyridine nucleotide-disulphide oxidoreductase BUM88_RS01865 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BUM88_RS01875 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BUM88_RS01890 PF01197 Ribosomal protein L31 BUM88_RS01895 PF03109 ABC1 family BUM88_RS01900 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BUM88_RS01900 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BUM88_RS01905 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BUM88_RS01905 PF02770 Acyl-CoA dehydrogenase, middle domain BUM88_RS01905 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BUM88_RS01910 PF01554 MatE BUM88_RS01920 PF04055 Radical SAM superfamily BUM88_RS01920 PF06969 HemN C-terminal domain BUM88_RS01925 PF00106 short chain dehydrogenase BUM88_RS01930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS01930 PF03466 LysR substrate binding domain BUM88_RS01945 PF13193 AMP-binding enzyme C-terminal domain BUM88_RS01945 PF00501 AMP-binding enzyme BUM88_RS01950 PF00575 S1 RNA binding domain BUM88_RS01950 PF10150 Ribonuclease E/G family BUM88_RS01950 PF12111 Polyribonucleotide phosphorylase C terminal BUM88_RS01960 PF01479 S4 domain BUM88_RS01960 PF00849 RNA pseudouridylate synthase BUM88_RS01970 PF08279 HTH domain BUM88_RS01970 PF13280 WYL domain BUM88_RS01975 PF02798 Glutathione S-transferase, N-terminal domain BUM88_RS01985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS01985 PF03466 LysR substrate binding domain BUM88_RS01990 PF12706 Beta-lactamase superfamily domain BUM88_RS01995 PF00141 Peroxidase BUM88_RS02000 PF02896 PEP-utilising enzyme, TIM barrel domain BUM88_RS02000 PF01590 GAF domain BUM88_RS02000 PF05524 PEP-utilising enzyme, N-terminal BUM88_RS02000 PF00391 PEP-utilising enzyme, mobile domain BUM88_RS02005 PF00293 NUDIX domain BUM88_RS02030 PF03466 LysR substrate binding domain BUM88_RS02030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS02040 PF00330 Aconitase family (aconitate hydratase) BUM88_RS02045 PF00694 Aconitase C-terminal domain BUM88_RS02055 PF00180 Isocitrate/isopropylmalate dehydrogenase BUM88_RS02070 PF01176 Translation initiation factor 1A / IF-1 BUM88_RS02080 PF01416 tRNA pseudouridine synthase BUM88_RS02100 PF02774 Semialdehyde dehydrogenase, dimerisation domain BUM88_RS02100 PF01118 Semialdehyde dehydrogenase, NAD binding domain BUM88_RS02110 PF00375 Sodium:dicarboxylate symporter family BUM88_RS02120 PF03279 Bacterial lipid A biosynthesis acyltransferase BUM88_RS02130 PF00005 ABC transporter BUM88_RS02130 PF16326 ABC transporter C-terminal domain BUM88_RS02130 PF12848 ABC transporter BUM88_RS02135 PF04102 SlyX BUM88_RS02140 PF00107 Zinc-binding dehydrogenase BUM88_RS02140 PF08240 Alcohol dehydrogenase GroES-like domain BUM88_RS02145 PF01638 HxlR-like helix-turn-helix BUM88_RS02155 PF01396 Topoisomerase DNA binding C4 zinc finger BUM88_RS02155 PF01131 DNA topoisomerase BUM88_RS02155 PF01751 Toprim domain BUM88_RS02155 PF08272 Topoisomerase I zinc-ribbon-like BUM88_RS02170 PF13361 UvrD-like helicase C-terminal domain BUM88_RS02170 PF00580 UvrD/REP helicase N-terminal domain BUM88_RS02175 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) BUM88_RS02195 PF00999 Sodium/hydrogen exchanger family BUM88_RS02195 PF02254 TrkA-N domain BUM88_RS02200 PF00471 Ribosomal protein L33 BUM88_RS02205 PF00830 Ribosomal L28 family BUM88_RS02210 PF00171 Aldehyde dehydrogenase family BUM88_RS02220 PF01842 ACT domain BUM88_RS02220 PF00551 Formyl transferase BUM88_RS02230 PF01618 MotA/TolQ/ExbB proton channel family BUM88_RS02235 PF02472 Biopolymer transport protein ExbD/TolR BUM88_RS02240 PF01625 Peptide methionine sulfoxide reductase BUM88_RS02250 PF00186 Dihydrofolate reductase BUM88_RS02255 PF00303 Thymidylate synthase BUM88_RS02270 PF01790 Prolipoprotein diacylglyceryl transferase BUM88_RS02290 PF00902 Sec-independent protein translocase protein (TatC) BUM88_RS02295 PF02416 mttA/Hcf106 family BUM88_RS02300 PF02416 mttA/Hcf106 family BUM88_RS02310 PF01725 Ham1 family BUM88_RS02320 PF00561 alpha/beta hydrolase fold BUM88_RS02320 PF07021 Methionine biosynthesis protein MetW BUM88_RS02325 PF00561 alpha/beta hydrolase fold BUM88_RS02330 PF00682 HMGL-like BUM88_RS02330 PF08502 LeuA allosteric (dimerisation) domain BUM88_RS02335 PF18331 PKHD-type hydroxylase C-terminal domain BUM88_RS02335 PF13640 2OG-Fe(II) oxygenase superfamily BUM88_RS02340 PF07715 TonB-dependent Receptor Plug Domain BUM88_RS02340 PF00593 TonB dependent receptor BUM88_RS02345 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BUM88_RS02345 PF05697 Bacterial trigger factor protein (TF) BUM88_RS02345 PF05698 Bacterial trigger factor protein (TF) C-terminus BUM88_RS02350 PF00574 Clp protease BUM88_RS02355 PF10431 C-terminal, D2-small domain, of ClpB protein BUM88_RS02355 PF06689 ClpX C4-type zinc finger BUM88_RS02355 PF07724 AAA domain (Cdc48 subfamily) BUM88_RS02370 PF05683 Fumarase C-terminus BUM88_RS02370 PF05681 Fumarate hydratase (Fumerase) BUM88_RS02375 PF01515 Phosphate acetyl/butaryl transferase BUM88_RS02375 PF07085 DRTGG domain BUM88_RS02380 PF00871 Acetokinase family BUM88_RS02390 PF00920 Dehydratase family BUM88_RS02395 PF01081 KDPG and KHG aldolase BUM88_RS02400 PF02447 GntP family permease BUM88_RS02405 PF01202 Shikimate kinase BUM88_RS02410 PF00171 Aldehyde dehydrogenase family BUM88_RS02415 PF00171 Aldehyde dehydrogenase family BUM88_RS02420 PF00561 alpha/beta hydrolase fold BUM88_RS02430 PF00933 Glycosyl hydrolase family 3 N terminal domain BUM88_RS02435 PF03572 Peptidase family S41 BUM88_RS02435 PF11818 C-terminal domain of tail specific protease (DUF3340) BUM88_RS02435 PF17804 Tail specific protease N-terminal domain BUM88_RS02435 PF00595 PDZ domain BUM88_RS02440 PF13439 Glycosyltransferase Family 4 BUM88_RS02440 PF00534 Glycosyl transferases group 1 BUM88_RS02445 PF01569 PAP2 superfamily BUM88_RS02450 PF04384 Iron-sulphur cluster assembly BUM88_RS02455 PF00334 Nucleoside diphosphate kinase BUM88_RS02460 PF04055 Radical SAM superfamily BUM88_RS02470 PF13464 Domain of unknown function (DUF4115) BUM88_RS02475 PF04551 GcpE protein BUM88_RS02480 PF03129 Anticodon binding domain BUM88_RS02480 PF13393 Histidyl-tRNA synthetase BUM88_RS02490 PF01011 PQQ enzyme repeat BUM88_RS02490 PF13360 PQQ-like domain BUM88_RS02495 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BUM88_RS02495 PF01926 50S ribosome-binding GTPase BUM88_RS02510 PF00550 Phosphopantetheine attachment site BUM88_RS02515 PF00550 Phosphopantetheine attachment site BUM88_RS02525 PF13193 AMP-binding enzyme C-terminal domain BUM88_RS02525 PF00501 AMP-binding enzyme BUM88_RS02530 PF00535 Glycosyl transferase family 2 BUM88_RS02540 PF00221 Aromatic amino acid lyase BUM88_RS02560 PF04820 Tryptophan halogenase BUM88_RS02570 PF00109 Beta-ketoacyl synthase, N-terminal domain BUM88_RS02570 PF02801 Beta-ketoacyl synthase, C-terminal domain BUM88_RS02585 PF00109 Beta-ketoacyl synthase, N-terminal domain BUM88_RS02585 PF02801 Beta-ketoacyl synthase, C-terminal domain BUM88_RS02600 PF02556 Preprotein translocase subunit SecB BUM88_RS02605 PF00462 Glutaredoxin BUM88_RS02615 PF03193 RsgA GTPase BUM88_RS02620 PF00929 Exonuclease BUM88_RS02635 PF02321 Outer membrane efflux protein BUM88_RS02640 PF02687 FtsX-like permease family BUM88_RS02640 PF00005 ABC transporter BUM88_RS02640 PF12704 MacB-like periplasmic core domain BUM88_RS02645 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BUM88_RS02660 PF13603 Leucyl-tRNA synthetase, Domain 2 BUM88_RS02660 PF00133 tRNA synthetases class I (I, L, M and V) BUM88_RS02660 PF08264 Anticodon-binding domain of tRNA BUM88_RS02660 PF09334 tRNA synthetases class I (M) BUM88_RS02665 PF00205 Thiamine pyrophosphate enzyme, central domain BUM88_RS02665 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BUM88_RS02665 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BUM88_RS02670 PF10369 Small subunit of acetolactate synthase BUM88_RS02675 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BUM88_RS02675 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BUM88_RS02680 PF03707 Bacterial signalling protein N terminal repeat BUM88_RS02680 PF00990 Diguanylate cyclase, GGDEF domain BUM88_RS02680 PF00563 EAL domain BUM88_RS02705 PF16658 Class II release factor RF3, C-terminal domain BUM88_RS02705 PF03144 Elongation factor Tu domain 2 BUM88_RS02705 PF00009 Elongation factor Tu GTP binding domain BUM88_RS02720 PF01026 TatD related DNase BUM88_RS02725 PF00330 Aconitase family (aconitate hydratase) BUM88_RS02725 PF00694 Aconitase C-terminal domain BUM88_RS02730 PF00899 ThiF family BUM88_RS02740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS02740 PF03466 LysR substrate binding domain BUM88_RS02755 PF01207 Dihydrouridine synthase (Dus) BUM88_RS02760 PF07690 Major Facilitator Superfamily BUM88_RS02770 PF00892 EamA-like transporter family BUM88_RS02775 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BUM88_RS02775 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BUM88_RS02780 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch BUM88_RS02785 PF02233 NAD(P) transhydrogenase beta subunit BUM88_RS02790 PF00106 short chain dehydrogenase BUM88_RS02805 PF01261 Xylose isomerase-like TIM barrel BUM88_RS02810 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BUM88_RS02810 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BUM88_RS02815 PF00378 Enoyl-CoA hydratase/isomerase BUM88_RS02820 PF00072 Response regulator receiver domain BUM88_RS02820 PF00512 His Kinase A (phospho-acceptor) domain BUM88_RS02820 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BUM88_RS02820 PF00672 HAMP domain BUM88_RS02820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BUM88_RS02820 PF01627 Hpt domain BUM88_RS02825 PF00291 Pyridoxal-phosphate dependent enzyme BUM88_RS02835 PF05958 tRNA (Uracil-5-)-methyltransferase BUM88_RS02840 PF02824 TGS domain BUM88_RS02840 PF04607 Region found in RelA / SpoT proteins BUM88_RS02840 PF13291 ACT domain BUM88_RS02850 PF03819 MazG nucleotide pyrophosphohydrolase domain BUM88_RS02860 PF12627 Probable RNA and SrmB- binding site of polymerase A BUM88_RS02860 PF01743 Poly A polymerase head domain BUM88_RS02860 PF12626 Polymerase A arginine-rich C-terminus BUM88_RS02865 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BUM88_RS02870 PF02548 Ketopantoate hydroxymethyltransferase BUM88_RS02875 PF02569 Pantoate-beta-alanine ligase BUM88_RS02880 PF03668 P-loop ATPase protein family BUM88_RS02885 PF00381 PTS HPr component phosphorylation site BUM88_RS02890 PF04751 Protein of unknown function (DUF615) BUM88_RS02895 PF00501 AMP-binding enzyme BUM88_RS02895 PF13193 AMP-binding enzyme C-terminal domain BUM88_RS02900 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BUM88_RS02900 PF02824 TGS domain BUM88_RS02900 PF03129 Anticodon binding domain BUM88_RS02900 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BUM88_RS02905 PF05198 Translation initiation factor IF-3, N-terminal domain BUM88_RS02905 PF00707 Translation initiation factor IF-3, C-terminal domain BUM88_RS02915 PF02798 Glutathione S-transferase, N-terminal domain BUM88_RS02915 PF00043 Glutathione S-transferase, C-terminal domain BUM88_RS02920 PF09335 SNARE associated Golgi protein BUM88_RS02925 PF07690 Major Facilitator Superfamily BUM88_RS02930 PF01632 Ribosomal protein L35 BUM88_RS02935 PF00453 Ribosomal protein L20 BUM88_RS02955 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BUM88_RS02955 PF01409 tRNA synthetases class II core domain (F) BUM88_RS02960 PF03483 B3/4 domain BUM88_RS02960 PF03147 Ferredoxin-fold anticodon binding domain BUM88_RS02960 PF01588 Putative tRNA binding domain BUM88_RS02960 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BUM88_RS02960 PF03484 tRNA synthetase B5 domain BUM88_RS02965 PF00216 Bacterial DNA-binding protein BUM88_RS02980 PF07497 Rho termination factor, RNA-binding domain BUM88_RS02980 PF07498 Rho termination factor, N-terminal domain BUM88_RS02980 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BUM88_RS02985 PF00085 Thioredoxin BUM88_RS02990 PF02541 Ppx/GppA phosphatase family BUM88_RS02995 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BUM88_RS03000 PF01171 PP-loop family BUM88_RS03000 PF09179 TilS substrate binding domain BUM88_RS03000 PF11734 TilS substrate C-terminal domain BUM88_RS03005 PF14748 Pyrroline-5-carboxylate reductase dimerisation BUM88_RS03005 PF03807 NADP oxidoreductase coenzyme F420-dependent BUM88_RS03010 PF02325 YGGT family BUM88_RS03015 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BUM88_RS03015 PF01612 3'-5' exonuclease BUM88_RS03015 PF01367 5'-3' exonuclease, C-terminal SAM fold BUM88_RS03015 PF00476 DNA polymerase family A BUM88_RS03035 PF00437 Type II/IV secretion system protein BUM88_RS03040 PF02566 OsmC-like protein BUM88_RS03045 PF01047 MarR family BUM88_RS03055 PF00795 Carbon-nitrogen hydrolase BUM88_RS03100 PF04552 Sigma-54, DNA binding domain BUM88_RS03100 PF00309 Sigma-54 factor, Activator interacting domain (AID) BUM88_RS03100 PF04963 Sigma-54 factor, core binding domain BUM88_RS03105 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BUM88_RS03110 PF01722 BolA-like protein BUM88_RS03115 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BUM88_RS03120 PF01634 ATP phosphoribosyltransferase BUM88_RS03125 PF00815 Histidinol dehydrogenase BUM88_RS03130 PF00155 Aminotransferase class I and II BUM88_RS03135 PF04715 Anthranilate synthase component I, N terminal region BUM88_RS03135 PF00425 chorismate binding enzyme BUM88_RS03175 PF00293 NUDIX domain BUM88_RS03180 PF00132 Bacterial transferase hexapeptide (six repeats) BUM88_RS03185 PF00814 Glycoprotease family BUM88_RS03190 PF04445 Putative SAM-dependent methyltransferase BUM88_RS03200 PF00756 Putative esterase BUM88_RS03210 PF00834 Ribulose-phosphate 3 epimerase family BUM88_RS03225 PF07732 Multicopper oxidase BUM88_RS03225 PF00394 Multicopper oxidase BUM88_RS03225 PF07731 Multicopper oxidase BUM88_RS03240 PF00893 Small Multidrug Resistance protein BUM88_RS03245 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BUM88_RS03245 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BUM88_RS03250 PF01960 ArgJ family BUM88_RS03255 PF02445 Quinolinate synthetase A protein BUM88_RS03280 PF00962 Adenosine/AMP deaminase BUM88_RS03285 PF08240 Alcohol dehydrogenase GroES-like domain BUM88_RS03285 PF00107 Zinc-binding dehydrogenase BUM88_RS03290 PF03466 LysR substrate binding domain BUM88_RS03290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS03295 PF02770 Acyl-CoA dehydrogenase, middle domain BUM88_RS03295 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BUM88_RS03295 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BUM88_RS03300 PF07690 Major Facilitator Superfamily BUM88_RS03305 PF02515 CoA-transferase family III BUM88_RS03310 PF17932 Tetracyclin repressor-like, C-terminal domain BUM88_RS03310 PF00440 Bacterial regulatory proteins, tetR family BUM88_RS03325 PF14537 Cytochrome c3 BUM88_RS03325 PF00890 FAD binding domain BUM88_RS03330 PF03466 LysR substrate binding domain BUM88_RS03330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS03340 PF07690 Major Facilitator Superfamily BUM88_RS03350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS03350 PF03466 LysR substrate binding domain BUM88_RS03365 PF01546 Peptidase family M20/M25/M40 BUM88_RS03365 PF07687 Peptidase dimerisation domain BUM88_RS03370 PF12833 Helix-turn-helix domain BUM88_RS03370 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term BUM88_RS03380 PF01810 LysE type translocator BUM88_RS03385 PF03466 LysR substrate binding domain BUM88_RS03385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS03395 PF01717 Cobalamin-independent synthase, Catalytic domain BUM88_RS03395 PF08267 Cobalamin-independent synthase, N-terminal domain BUM88_RS03400 PF01613 Flavin reductase like domain BUM88_RS03435 PF17074 Darcynin, domain of unknown function BUM88_RS03445 PF08892 YqcI/YcgG family BUM88_RS03450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS03450 PF03466 LysR substrate binding domain BUM88_RS03470 PF02567 Phenazine biosynthesis-like protein BUM88_RS03480 PF01042 Endoribonuclease L-PSP BUM88_RS03485 PF03466 LysR substrate binding domain BUM88_RS03485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS03490 PF00384 Molybdopterin oxidoreductase BUM88_RS03495 PF02634 FdhD/NarQ family BUM88_RS03500 PF01062 Bestrophin, RFP-TM, chloride channel BUM88_RS03505 PF00268 Ribonucleotide reductase, small chain BUM88_RS03515 PF03477 ATP cone domain BUM88_RS03515 PF02867 Ribonucleotide reductase, barrel domain BUM88_RS03515 PF00317 Ribonucleotide reductase, all-alpha domain BUM88_RS03525 PF00486 Transcriptional regulatory protein, C terminal BUM88_RS03525 PF00072 Response regulator receiver domain BUM88_RS03530 PF00512 His Kinase A (phospho-acceptor) domain BUM88_RS03530 PF00672 HAMP domain BUM88_RS03530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BUM88_RS03540 PF00990 Diguanylate cyclase, GGDEF domain BUM88_RS03545 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 BUM88_RS03550 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BUM88_RS03555 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BUM88_RS03555 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BUM88_RS03565 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BUM88_RS03565 PF10531 SLBB domain BUM88_RS03565 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BUM88_RS03570 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BUM88_RS03570 PF00384 Molybdopterin oxidoreductase BUM88_RS03570 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BUM88_RS03575 PF00146 NADH dehydrogenase BUM88_RS03580 PF12838 4Fe-4S dicluster domain BUM88_RS03585 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 BUM88_RS03590 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BUM88_RS03595 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BUM88_RS03595 PF00361 Proton-conducting membrane transporter BUM88_RS03600 PF00361 Proton-conducting membrane transporter BUM88_RS03605 PF00361 Proton-conducting membrane transporter BUM88_RS03620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS03620 PF03466 LysR substrate binding domain BUM88_RS03625 PF00175 Oxidoreductase NAD-binding domain BUM88_RS03625 PF00970 Oxidoreductase FAD-binding domain BUM88_RS03640 PF05552 Conserved TM helix BUM88_RS03655 PF00291 Pyridoxal-phosphate dependent enzyme BUM88_RS03660 PF13533 Biotin-lipoyl like BUM88_RS03690 PF09334 tRNA synthetases class I (M) BUM88_RS03690 PF01588 Putative tRNA binding domain BUM88_RS03700 PF10609 NUBPL iron-transfer P-loop NTPase BUM88_RS03705 PF01048 Phosphorylase superfamily BUM88_RS03720 PF00692 dUTPase BUM88_RS03755 PF01207 Dihydrouridine synthase (Dus) BUM88_RS03765 PF00448 SRP54-type protein, GTPase domain BUM88_RS03765 PF02881 SRP54-type protein, helical bundle domain BUM88_RS03765 PF02978 Signal peptide binding domain BUM88_RS03770 PF03309 Type III pantothenate kinase BUM88_RS03780 PF01925 Sulfite exporter TauE/SafE BUM88_RS03790 PF06470 SMC proteins Flexible Hinge Domain BUM88_RS03790 PF02463 RecF/RecN/SMC N terminal domain BUM88_RS03800 PF12826 Helix-hairpin-helix motif BUM88_RS03800 PF00533 BRCA1 C Terminus (BRCT) domain BUM88_RS03800 PF01653 NAD-dependent DNA ligase adenylation domain BUM88_RS03800 PF03120 NAD-dependent DNA ligase OB-fold domain BUM88_RS03800 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BUM88_RS03805 PF00210 Ferritin-like domain BUM88_RS03810 PF07690 Major Facilitator Superfamily BUM88_RS03815 PF00982 Glycosyltransferase family 20 BUM88_RS03820 PF02358 Trehalose-phosphatase BUM88_RS03825 PF12697 Alpha/beta hydrolase family BUM88_RS03825 PF08241 Methyltransferase domain BUM88_RS03830 PF00202 Aminotransferase class-III BUM88_RS03830 PF04055 Radical SAM superfamily BUM88_RS03830 PF06968 Biotin and Thiamin Synthesis associated domain BUM88_RS03835 PF00155 Aminotransferase class I and II BUM88_RS03850 PF00849 RNA pseudouridylate synthase BUM88_RS03850 PF01479 S4 domain BUM88_RS03855 PF04079 Segregation and condensation complex subunit ScpB BUM88_RS03860 PF02616 Segregation and condensation protein ScpA BUM88_RS03865 PF01300 Telomere recombination BUM88_RS03870 PF04315 Elongation factor P hydroxylase BUM88_RS03875 PF02620 Large ribosomal RNA subunit accumulation protein YceD BUM88_RS03880 PF01783 Ribosomal L32p protein family BUM88_RS03885 PF00698 Acyl transferase domain BUM88_RS03895 PF00550 Phosphopantetheine attachment site BUM88_RS03900 PF04972 BON domain BUM88_RS03900 PF01476 LysM domain BUM88_RS03905 PF02581 Thiamine monophosphate synthase BUM88_RS03905 PF03070 TENA/THI-4/PQQC family BUM88_RS03905 PF08543 Phosphomethylpyrimidine kinase BUM88_RS03910 PF13419 Haloacid dehalogenase-like hydrolase BUM88_RS03915 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BUM88_RS03930 PF02261 Aspartate decarboxylase BUM88_RS03935 PF01195 Peptidyl-tRNA hydrolase BUM88_RS03940 PF01386 Ribosomal L25p family BUM88_RS03945 PF14572 Phosphoribosyl synthetase-associated domain BUM88_RS03945 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BUM88_RS03965 PF00288 GHMP kinases N terminal domain BUM88_RS03965 PF08544 GHMP kinases C terminal BUM88_RS03970 PF03550 Outer membrane lipoprotein LolB BUM88_RS03980 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BUM88_RS03980 PF01488 Shikimate / quinate 5-dehydrogenase BUM88_RS03980 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BUM88_RS03985 PF01807 CHC2 zinc finger BUM88_RS03985 PF08275 DNA primase catalytic core, N-terminal domain BUM88_RS03985 PF10410 DnaB-helicase binding domain of primase BUM88_RS03985 PF08278 DNA primase DnaG DnaB-binding BUM88_RS03990 PF13525 Outer membrane lipoprotein BUM88_RS03995 PF00849 RNA pseudouridylate synthase BUM88_RS03995 PF01479 S4 domain BUM88_RS04000 PF02578 Multi-copper polyphenol oxidoreductase laccase BUM88_RS04005 PF03358 NADPH-dependent FMN reductase BUM88_RS04010 PF01668 SmpB protein BUM88_RS04015 PF01467 Cytidylyltransferase-like BUM88_RS04020 PF00037 4Fe-4S binding domain BUM88_RS04050 PF00795 Carbon-nitrogen hydrolase BUM88_RS04050 PF02540 NAD synthase BUM88_RS04060 PF03653 Uncharacterised protein family (UPF0093) BUM88_RS04065 PF00109 Beta-ketoacyl synthase, N-terminal domain BUM88_RS04065 PF02801 Beta-ketoacyl synthase, C-terminal domain BUM88_RS04075 PF00164 Ribosomal protein S12/S23 BUM88_RS04080 PF00177 Ribosomal protein S7p/S5e BUM88_RS04085 PF14492 Elongation Factor G, domain II BUM88_RS04085 PF03144 Elongation factor Tu domain 2 BUM88_RS04085 PF03764 Elongation factor G, domain IV BUM88_RS04085 PF00679 Elongation factor G C-terminus BUM88_RS04085 PF00009 Elongation factor Tu GTP binding domain BUM88_RS04090 PF03144 Elongation factor Tu domain 2 BUM88_RS04090 PF03143 Elongation factor Tu C-terminal domain BUM88_RS04090 PF00009 Elongation factor Tu GTP binding domain BUM88_RS04105 PF00583 Acetyltransferase (GNAT) family BUM88_RS04110 PF04376 Arginine-tRNA-protein transferase, N terminus BUM88_RS04110 PF04377 Arginine-tRNA-protein transferase, C terminus BUM88_RS04115 PF03588 Leucyl/phenylalanyl-tRNA protein transferase BUM88_RS04125 PF07992 Pyridine nucleotide-disulphide oxidoreductase BUM88_RS04130 PF01580 FtsK/SpoIIIE family BUM88_RS04130 PF13491 4TM region of DNA translocase FtsK/SpoIIIE BUM88_RS04130 PF17854 FtsK alpha domain BUM88_RS04130 PF09397 Ftsk gamma domain BUM88_RS04135 PF01810 LysE type translocator BUM88_RS04150 PF03776 Septum formation topological specificity factor MinE BUM88_RS04155 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BUM88_RS04160 PF03775 Septum formation inhibitor MinC, C-terminal domain BUM88_RS04170 PF01553 Acyltransferase BUM88_RS04175 PF13488 Glycine zipper BUM88_RS04175 PF00691 OmpA family BUM88_RS04180 PF00580 UvrD/REP helicase N-terminal domain BUM88_RS04180 PF13361 UvrD-like helicase C-terminal domain BUM88_RS04185 PF00692 dUTPase BUM88_RS04190 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BUM88_RS04190 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BUM88_RS04190 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BUM88_RS04190 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BUM88_RS04195 PF00696 Amino acid kinase family BUM88_RS04205 PF13230 Glutamine amidotransferases class-II BUM88_RS04210 PF01814 Hemerythrin HHE cation binding domain BUM88_RS04225 PF03658 RnfH family Ubiquitin BUM88_RS04230 PF04355 SmpA / OmlA family BUM88_RS04235 PF01475 Ferric uptake regulator family BUM88_RS04240 PF00437 Type II/IV secretion system protein BUM88_RS04245 PF00437 Type II/IV secretion system protein BUM88_RS04250 PF01168 Alanine racemase, N-terminal domain BUM88_RS04260 PF00149 Calcineurin-like phosphoesterase BUM88_RS04260 PF12320 Type 5 capsule protein repressor C-terminal domain BUM88_RS04280 PF01370 NAD dependent epimerase/dehydratase family BUM88_RS04280 PF08338 Domain of unknown function (DUF1731) BUM88_RS04285 PF01266 FAD dependent oxidoreductase BUM88_RS04290 PF00490 Delta-aminolevulinic acid dehydratase BUM88_RS04295 PF03061 Thioesterase superfamily BUM88_RS04300 PF00529 HlyD membrane-fusion protein of T1SS BUM88_RS04300 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BUM88_RS04305 PF07690 Major Facilitator Superfamily BUM88_RS04355 PF00083 Sugar (and other) transporter BUM88_RS04360 PF00701 Dihydrodipicolinate synthetase family BUM88_RS04370 PF04542 Sigma-70 region 2 BUM88_RS04370 PF08281 Sigma-70, region 4 BUM88_RS04390 PF04575 Protein of unknown function (DUF560) BUM88_RS04400 PF01126 Heme oxygenase BUM88_RS04425 PF13520 Amino acid permease BUM88_RS04430 PF02574 Homocysteine S-methyltransferase BUM88_RS04440 PF06039 Malate:quinone oxidoreductase (Mqo) BUM88_RS04445 PF00732 GMC oxidoreductase BUM88_RS04445 PF05199 GMC oxidoreductase BUM88_RS04450 PF00171 Aldehyde dehydrogenase family BUM88_RS04455 PF13977 BetI-type transcriptional repressor, C-terminal BUM88_RS04455 PF00440 Bacterial regulatory proteins, tetR family BUM88_RS04460 PF02028 BCCT, betaine/carnitine/choline family transporter BUM88_RS04465 PF02028 BCCT, betaine/carnitine/choline family transporter BUM88_RS04475 PF03061 Thioesterase superfamily BUM88_RS04485 PF02492 CobW/HypB/UreG, nucleotide-binding domain BUM88_RS04485 PF07683 Cobalamin synthesis protein cobW C-terminal domain BUM88_RS04490 PF00375 Sodium:dicarboxylate symporter family BUM88_RS04495 PF07152 YaeQ protein BUM88_RS04500 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BUM88_RS04505 PF01522 Polysaccharide deacetylase BUM88_RS04505 PF14883 Hypothetical glycosyl hydrolase family 13 BUM88_RS04510 PF00535 Glycosyl transferase family 2 BUM88_RS04520 PF00440 Bacterial regulatory proteins, tetR family BUM88_RS04530 PF00378 Enoyl-CoA hydratase/isomerase BUM88_RS04550 PF09339 IclR helix-turn-helix domain BUM88_RS04550 PF01614 Bacterial transcriptional regulator BUM88_RS04555 PF00355 Rieske [2Fe-2S] domain BUM88_RS04565 PF00355 Rieske [2Fe-2S] domain BUM88_RS04575 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BUM88_RS04580 PF07992 Pyridine nucleotide-disulphide oxidoreductase BUM88_RS04580 PF14759 Reductase C-terminal BUM88_RS04585 PF07690 Major Facilitator Superfamily BUM88_RS04595 PF12697 Alpha/beta hydrolase family BUM88_RS04605 PF01958 Domain of unknown function DUF108 BUM88_RS04605 PF03447 Homoserine dehydrogenase, NAD binding domain BUM88_RS04610 PF00171 Aldehyde dehydrogenase family BUM88_RS04615 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BUM88_RS04615 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BUM88_RS04615 PF00205 Thiamine pyrophosphate enzyme, central domain BUM88_RS04625 PF07690 Major Facilitator Superfamily BUM88_RS04630 PF01327 Polypeptide deformylase BUM88_RS04635 PF04960 Glutaminase BUM88_RS04640 PF07883 Cupin domain BUM88_RS04640 PF12833 Helix-turn-helix domain BUM88_RS04645 PF07690 Major Facilitator Superfamily BUM88_RS04655 PF01263 Aldose 1-epimerase BUM88_RS04665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS04665 PF03466 LysR substrate binding domain BUM88_RS04675 PF07690 Major Facilitator Superfamily BUM88_RS04680 PF00456 Transketolase, thiamine diphosphate binding domain BUM88_RS04685 PF02780 Transketolase, C-terminal domain BUM88_RS04685 PF02779 Transketolase, pyrimidine binding domain BUM88_RS04690 PF02310 B12 binding domain BUM88_RS04690 PF02607 B12 binding domain BUM88_RS04690 PF02965 Vitamin B12 dependent methionine synthase, activation domain BUM88_RS04690 PF00809 Pterin binding enzyme BUM88_RS04690 PF02574 Homocysteine S-methyltransferase BUM88_RS04695 PF01384 Phosphate transporter family BUM88_RS04700 PF00291 Pyridoxal-phosphate dependent enzyme BUM88_RS04715 PF03781 Sulfatase-modifying factor enzyme 1 BUM88_RS04720 PF00884 Sulfatase BUM88_RS04730 PF01521 Iron-sulphur cluster biosynthesis BUM88_RS04730 PF01106 NifU-like domain BUM88_RS04735 PF00593 TonB dependent receptor BUM88_RS04735 PF07715 TonB-dependent Receptor Plug Domain BUM88_RS04745 PF00561 alpha/beta hydrolase fold BUM88_RS04750 PF00484 Carbonic anhydrase BUM88_RS04755 PF13472 GDSL-like Lipase/Acylhydrolase family BUM88_RS04760 PF00005 ABC transporter BUM88_RS04770 PF01694 Rhomboid family BUM88_RS04775 PF00912 Transglycosylase BUM88_RS04780 PF02503 Polyphosphate kinase middle domain BUM88_RS04780 PF13090 Polyphosphate kinase C-terminal domain 2 BUM88_RS04780 PF17941 Polyphosphate kinase C-terminal domain 1 BUM88_RS04780 PF13089 Polyphosphate kinase N-terminal domain BUM88_RS04795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS04795 PF03466 LysR substrate binding domain BUM88_RS04800 PF00561 alpha/beta hydrolase fold BUM88_RS04805 PF07992 Pyridine nucleotide-disulphide oxidoreductase BUM88_RS04805 PF18113 Rubredoxin binding C-terminal domain BUM88_RS04810 PF00301 Rubredoxin BUM88_RS04825 PF01336 OB-fold nucleic acid binding domain BUM88_RS04825 PF00152 tRNA synthetases class II (D, K and N) BUM88_RS04830 PF14052 Capsule assembly protein Wzi BUM88_RS04840 PF01507 Phosphoadenosine phosphosulfate reductase family BUM88_RS04845 PF00009 Elongation factor Tu GTP binding domain BUM88_RS04860 PF03600 Citrate transporter BUM88_RS04865 PF00571 CBS domain BUM88_RS04865 PF03471 Transporter associated domain BUM88_RS04865 PF01595 Cyclin M transmembrane N-terminal domain BUM88_RS04870 PF03466 LysR substrate binding domain BUM88_RS04870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS04875 PF00463 Isocitrate lyase family BUM88_RS04880 PF04170 NlpE N-terminal domain BUM88_RS04880 PF17185 NlpE C-terminal OB domain BUM88_RS04890 PF01774 UreD urease accessory protein BUM88_RS04895 PF00547 Urease, gamma subunit BUM88_RS04900 PF00699 Urease beta subunit BUM88_RS04905 PF01979 Amidohydrolase family BUM88_RS04905 PF00449 Urease alpha-subunit, N-terminal domain BUM88_RS04910 PF02814 UreE urease accessory protein, N-terminal domain BUM88_RS04910 PF05194 UreE urease accessory protein, C-terminal domain BUM88_RS04915 PF01730 UreF BUM88_RS04920 PF02492 CobW/HypB/UreG, nucleotide-binding domain BUM88_RS04935 PF00905 Penicillin binding protein transpeptidase domain BUM88_RS04935 PF03717 Penicillin-binding Protein dimerisation domain BUM88_RS04950 PF05191 Adenylate kinase, active site lid BUM88_RS04960 PF00730 HhH-GPD superfamily base excision DNA repair protein BUM88_RS04960 PF00633 Helix-hairpin-helix motif BUM88_RS04960 PF10576 Iron-sulfur binding domain of endonuclease III BUM88_RS04965 PF04060 Putative Fe-S cluster BUM88_RS04970 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BUM88_RS04970 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BUM88_RS04980 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BUM88_RS04985 PF02590 Predicted SPOUT methyltransferase BUM88_RS04990 PF00004 ATPase family associated with various cellular activities (AAA) BUM88_RS04990 PF05362 Lon protease (S16) C-terminal proteolytic domain BUM88_RS04990 PF02190 ATP-dependent protease La (LON) substrate-binding domain BUM88_RS04995 PF01812 5-formyltetrahydrofolate cyclo-ligase family BUM88_RS05035 PF05195 Aminopeptidase P, N-terminal domain BUM88_RS05035 PF00557 Metallopeptidase family M24 BUM88_RS05040 PF01494 FAD binding domain BUM88_RS05045 PF01494 FAD binding domain BUM88_RS05055 PF13411 MerR HTH family regulatory protein BUM88_RS05065 PF01810 LysE type translocator BUM88_RS05070 PF03466 LysR substrate binding domain BUM88_RS05070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS05080 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BUM88_RS05085 PF02021 Uncharacterised protein family UPF0102 BUM88_RS05090 PF04972 BON domain BUM88_RS05100 PF09297 NADH pyrophosphatase zinc ribbon domain BUM88_RS05100 PF00293 NUDIX domain BUM88_RS05110 PF00929 Exonuclease BUM88_RS05115 PF01464 Transglycosylase SLT domain BUM88_RS05115 PF01476 LysM domain BUM88_RS05115 PF01464 Transglycosylase SLT domain BUM88_RS05115 PF01476 LysM domain BUM88_RS05120 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BUM88_RS05125 PF00528 Binding-protein-dependent transport system inner membrane component BUM88_RS05130 PF00528 Binding-protein-dependent transport system inner membrane component BUM88_RS05130 PF12911 N-terminal TM domain of oligopeptide transport permease C BUM88_RS05135 PF00005 ABC transporter BUM88_RS05135 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BUM88_RS05140 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BUM88_RS05140 PF07992 Pyridine nucleotide-disulphide oxidoreductase BUM88_RS05145 PF07715 TonB-dependent Receptor Plug Domain BUM88_RS05145 PF00593 TonB dependent receptor BUM88_RS05155 PF00929 Exonuclease BUM88_RS05160 PF01979 Amidohydrolase family BUM88_RS05165 PF01590 GAF domain BUM88_RS05165 PF00360 Phytochrome region BUM88_RS05165 PF00990 Diguanylate cyclase, GGDEF domain BUM88_RS05165 PF00563 EAL domain BUM88_RS05170 PF00764 Arginosuccinate synthase BUM88_RS05180 PF07992 Pyridine nucleotide-disulphide oxidoreductase BUM88_RS05180 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BUM88_RS05190 PF01494 FAD binding domain BUM88_RS05205 PF05987 Bacterial protein of unknown function (DUF898) BUM88_RS05225 PF03783 Curli production assembly/transport component CsgG BUM88_RS05235 PF05643 Putative bacterial lipoprotein (DUF799) BUM88_RS05245 PF00324 Amino acid permease BUM88_RS05255 PF01266 FAD dependent oxidoreductase BUM88_RS05260 PF00324 Amino acid permease BUM88_RS05270 PF00392 Bacterial regulatory proteins, gntR family BUM88_RS05270 PF07729 FCD domain BUM88_RS05280 PF00171 Aldehyde dehydrogenase family BUM88_RS05295 PF00202 Aminotransferase class-III BUM88_RS05300 PF04958 Arginine N-succinyltransferase beta subunit BUM88_RS05305 PF00324 Amino acid permease BUM88_RS05330 PF00171 Aldehyde dehydrogenase family BUM88_RS05335 PF12833 Helix-turn-helix domain BUM88_RS05335 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term BUM88_RS05340 PF00892 EamA-like transporter family BUM88_RS05345 PF08666 SAF domain BUM88_RS05345 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus BUM88_RS05350 PF07690 Major Facilitator Superfamily BUM88_RS05355 PF13378 Enolase C-terminal domain-like BUM88_RS05360 PF00701 Dihydrodipicolinate synthetase family BUM88_RS05365 PF00171 Aldehyde dehydrogenase family BUM88_RS05370 PF00392 Bacterial regulatory proteins, gntR family BUM88_RS05370 PF07729 FCD domain BUM88_RS05390 PF03573 outer membrane porin, OprD family BUM88_RS05395 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BUM88_RS05395 PF02770 Acyl-CoA dehydrogenase, middle domain BUM88_RS05395 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BUM88_RS05405 PF00171 Aldehyde dehydrogenase family BUM88_RS05410 PF00378 Enoyl-CoA hydratase/isomerase BUM88_RS05415 PF07690 Major Facilitator Superfamily BUM88_RS05430 PF00111 2Fe-2S iron-sulfur cluster binding domain BUM88_RS05430 PF00175 Oxidoreductase NAD-binding domain BUM88_RS05435 PF00355 Rieske [2Fe-2S] domain BUM88_RS05445 PF03781 Sulfatase-modifying factor enzyme 1 BUM88_RS05450 PF00884 Sulfatase BUM88_RS05455 PF07690 Major Facilitator Superfamily BUM88_RS05460 PF03573 outer membrane porin, OprD family BUM88_RS05465 PF18381 YcaO cyclodehydratase C-terminal domain BUM88_RS05465 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding BUM88_RS05470 PF05199 GMC oxidoreductase BUM88_RS05475 PF07859 alpha/beta hydrolase fold BUM88_RS05480 PF00106 short chain dehydrogenase BUM88_RS05485 PF00743 Flavin-binding monooxygenase-like BUM88_RS05490 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term BUM88_RS05490 PF12833 Helix-turn-helix domain BUM88_RS05495 PF05683 Fumarase C-terminus BUM88_RS05500 PF05681 Fumarate hydratase (Fumerase) BUM88_RS05505 PF07690 Major Facilitator Superfamily BUM88_RS05510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS05510 PF03466 LysR substrate binding domain BUM88_RS05515 PF04072 Leucine carboxyl methyltransferase BUM88_RS05520 PF00743 Flavin-binding monooxygenase-like BUM88_RS05525 PF00106 short chain dehydrogenase BUM88_RS05535 PF00440 Bacterial regulatory proteins, tetR family BUM88_RS05535 PF17932 Tetracyclin repressor-like, C-terminal domain BUM88_RS05540 PF02678 Pirin BUM88_RS05540 PF17954 Quercetinase C-terminal cupin domain BUM88_RS05550 PF00860 Permease family BUM88_RS05555 PF00962 Adenosine/AMP deaminase BUM88_RS05560 PF01292 Prokaryotic cytochrome b561 BUM88_RS05570 PF01351 Ribonuclease HII BUM88_RS05575 PF02599 Global regulator protein family BUM88_RS05580 PF01842 ACT domain BUM88_RS05580 PF13840 ACT domain BUM88_RS05580 PF00696 Amino acid kinase family BUM88_RS05585 PF02272 DHHA1 domain BUM88_RS05585 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BUM88_RS05585 PF01411 tRNA synthetases class II (A) BUM88_RS05590 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BUM88_RS05590 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BUM88_RS05600 PF13393 Histidyl-tRNA synthetase BUM88_RS05605 PF00709 Adenylosuccinate synthetase BUM88_RS05620 PF00248 Aldo/keto reductase family BUM88_RS05625 PF00027 Cyclic nucleotide-binding domain BUM88_RS05625 PF13545 Crp-like helix-turn-helix domain BUM88_RS05630 PF02566 OsmC-like protein BUM88_RS05645 PF10431 C-terminal, D2-small domain, of ClpB protein BUM88_RS05645 PF02861 Clp amino terminal domain, pathogenicity island component BUM88_RS05645 PF17871 AAA lid domain BUM88_RS05645 PF07724 AAA domain (Cdc48 subfamily) BUM88_RS05645 PF00004 ATPase family associated with various cellular activities (AAA) BUM88_RS05660 PF02926 THUMP domain BUM88_RS05660 PF10672 S-adenosylmethionine-dependent methyltransferase BUM88_RS05660 PF01170 Putative RNA methylase family UPF0020 BUM88_RS05670 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BUM88_RS05670 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BUM88_RS05675 PF01979 Amidohydrolase family BUM88_RS05680 PF13488 Glycine zipper BUM88_RS05680 PF00691 OmpA family BUM88_RS05690 PF13417 Glutathione S-transferase, N-terminal domain BUM88_RS05690 PF00043 Glutathione S-transferase, C-terminal domain BUM88_RS05700 PF02390 Putative methyltransferase BUM88_RS05710 PF00043 Glutathione S-transferase, C-terminal domain BUM88_RS05710 PF02798 Glutathione S-transferase, N-terminal domain BUM88_RS05720 PF13192 Thioredoxin domain BUM88_RS05720 PF07992 Pyridine nucleotide-disulphide oxidoreductase BUM88_RS05730 PF05175 Methyltransferase small domain BUM88_RS05740 PF00487 Fatty acid desaturase BUM88_RS05750 PF10417 C-terminal domain of 1-Cys peroxiredoxin BUM88_RS05750 PF00578 AhpC/TSA family BUM88_RS05755 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold BUM88_RS05755 PF00271 Helicase conserved C-terminal domain BUM88_RS05755 PF04408 Helicase associated domain (HA2) BUM88_RS05755 PF00270 DEAD/DEAH box helicase BUM88_RS05755 PF11898 Domain of unknown function (DUF3418) BUM88_RS05760 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BUM88_RS05760 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BUM88_RS05770 PF07690 Major Facilitator Superfamily BUM88_RS05775 PF03594 Benzoate membrane transport protein BUM88_RS05780 PF00106 short chain dehydrogenase BUM88_RS05785 PF00175 Oxidoreductase NAD-binding domain BUM88_RS05785 PF00111 2Fe-2S iron-sulfur cluster binding domain BUM88_RS05785 PF00970 Oxidoreductase FAD-binding domain BUM88_RS05795 PF00848 Ring hydroxylating alpha subunit (catalytic domain) BUM88_RS05795 PF00355 Rieske [2Fe-2S] domain BUM88_RS05805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS05805 PF03466 LysR substrate binding domain BUM88_RS05815 PF00403 Heavy-metal-associated domain BUM88_RS05820 PF00376 MerR family regulatory protein BUM88_RS05820 PF09278 MerR, DNA binding BUM88_RS05855 PF13742 OB-fold nucleic acid binding domain BUM88_RS05855 PF02601 Exonuclease VII, large subunit BUM88_RS05890 PF01810 LysE type translocator BUM88_RS05895 PF03279 Bacterial lipid A biosynthesis acyltransferase BUM88_RS05900 PF00313 'Cold-shock' DNA-binding domain BUM88_RS05910 PF14748 Pyrroline-5-carboxylate reductase dimerisation BUM88_RS05910 PF03807 NADP oxidoreductase coenzyme F420-dependent BUM88_RS05920 PF01037 Lrp/AsnC ligand binding domain BUM88_RS05925 PF13419 Haloacid dehalogenase-like hydrolase BUM88_RS05930 PF08241 Methyltransferase domain BUM88_RS05940 PF01202 Shikimate kinase BUM88_RS06000 PF00924 Mechanosensitive ion channel BUM88_RS06015 PF07992 Pyridine nucleotide-disulphide oxidoreductase BUM88_RS06015 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BUM88_RS06030 PF07690 Major Facilitator Superfamily BUM88_RS06035 PF01638 HxlR-like helix-turn-helix BUM88_RS06075 PF09190 DALR domain BUM88_RS06075 PF01406 tRNA synthetases class I (C) catalytic domain BUM88_RS06080 PF01380 SIS domain BUM88_RS06080 PF00571 CBS domain BUM88_RS06095 PF03968 OstA-like protein BUM88_RS06100 PF12399 Branched-chain amino acid ATP-binding cassette transporter BUM88_RS06100 PF00005 ABC transporter BUM88_RS06105 PF02321 Outer membrane efflux protein BUM88_RS06110 PF00664 ABC transporter transmembrane region BUM88_RS06110 PF00005 ABC transporter BUM88_RS06110 PF03412 Peptidase C39 family BUM88_RS06115 PF13533 Biotin-lipoyl like BUM88_RS06120 PF01205 Uncharacterized protein family UPF0029 BUM88_RS06125 PF00132 Bacterial transferase hexapeptide (six repeats) BUM88_RS06135 PF01596 O-methyltransferase BUM88_RS06150 PF00037 4Fe-4S binding domain BUM88_RS06150 PF11953 Domain of unknown function (DUF3470) BUM88_RS06160 PF00488 MutS domain V BUM88_RS06160 PF05190 MutS family domain IV BUM88_RS06160 PF05192 MutS domain III BUM88_RS06160 PF01624 MutS domain I BUM88_RS06160 PF05188 MutS domain II BUM88_RS06165 PF03466 LysR substrate binding domain BUM88_RS06165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS06175 PF01575 MaoC like domain BUM88_RS06175 PF00171 Aldehyde dehydrogenase family BUM88_RS06180 PF05138 Phenylacetic acid catabolic protein BUM88_RS06185 PF06243 Phenylacetic acid degradation B BUM88_RS06190 PF05138 Phenylacetic acid catabolic protein BUM88_RS06195 PF01883 Iron-sulfur cluster assembly protein BUM88_RS06200 PF00970 Oxidoreductase FAD-binding domain BUM88_RS06200 PF00111 2Fe-2S iron-sulfur cluster binding domain BUM88_RS06200 PF00175 Oxidoreductase NAD-binding domain BUM88_RS06205 PF00378 Enoyl-CoA hydratase/isomerase BUM88_RS06210 PF00378 Enoyl-CoA hydratase/isomerase BUM88_RS06215 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BUM88_RS06215 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BUM88_RS06215 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain BUM88_RS06220 PF02803 Thiolase, C-terminal domain BUM88_RS06220 PF00108 Thiolase, N-terminal domain BUM88_RS06225 PF00501 AMP-binding enzyme BUM88_RS06225 PF14535 AMP-binding enzyme C-terminal domain BUM88_RS06230 PF08223 PaaX-like protein C-terminal domain BUM88_RS06230 PF07848 PaaX-like protein BUM88_RS06235 PF00132 Bacterial transferase hexapeptide (six repeats) BUM88_RS06240 PF03061 Thioesterase superfamily BUM88_RS06265 PF00202 Aminotransferase class-III BUM88_RS06270 PF12833 Helix-turn-helix domain BUM88_RS06270 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term BUM88_RS06280 PF01636 Phosphotransferase enzyme family BUM88_RS06285 PF13520 Amino acid permease BUM88_RS06355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS06355 PF03466 LysR substrate binding domain BUM88_RS06360 PF01979 Amidohydrolase family BUM88_RS06375 PF07715 TonB-dependent Receptor Plug Domain BUM88_RS06375 PF00593 TonB dependent receptor BUM88_RS06380 PF04773 FecR protein BUM88_RS06380 PF16220 Domain of unknown function (DUF4880) BUM88_RS06390 PF03707 Bacterial signalling protein N terminal repeat BUM88_RS06390 PF00563 EAL domain BUM88_RS06390 PF00990 Diguanylate cyclase, GGDEF domain BUM88_RS06395 PF07681 DoxX BUM88_RS06400 PF00082 Subtilase family BUM88_RS06400 PF12951 Passenger-associated-transport-repeat BUM88_RS06400 PF03797 Autotransporter beta-domain BUM88_RS06405 PF07859 alpha/beta hydrolase fold BUM88_RS06410 PF00561 alpha/beta hydrolase fold BUM88_RS06420 PF00440 Bacterial regulatory proteins, tetR family BUM88_RS06425 PF03466 LysR substrate binding domain BUM88_RS06425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS06430 PF00144 Beta-lactamase BUM88_RS06435 PF07690 Major Facilitator Superfamily BUM88_RS06440 PF00293 NUDIX domain BUM88_RS06460 PF14278 Transcriptional regulator C-terminal region BUM88_RS06460 PF00440 Bacterial regulatory proteins, tetR family BUM88_RS06505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS06505 PF03466 LysR substrate binding domain BUM88_RS06510 PF01566 Natural resistance-associated macrophage protein BUM88_RS06515 PF03746 LamB/YcsF family BUM88_RS06520 PF07286 Protein of unknown function (DUF1445) BUM88_RS06530 PF00289 Biotin carboxylase, N-terminal domain BUM88_RS06530 PF02785 Biotin carboxylase C-terminal domain BUM88_RS06530 PF00364 Biotin-requiring enzyme BUM88_RS06530 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BUM88_RS06535 PF00654 Voltage gated chloride channel BUM88_RS06600 PF00892 EamA-like transporter family BUM88_RS06605 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BUM88_RS06605 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BUM88_RS06620 PF02785 Biotin carboxylase C-terminal domain BUM88_RS06620 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BUM88_RS06620 PF00289 Biotin carboxylase, N-terminal domain BUM88_RS06625 PF02525 Flavodoxin-like fold BUM88_RS06630 PF01638 HxlR-like helix-turn-helix BUM88_RS06640 PF08753 NikR C terminal nickel binding domain BUM88_RS06640 PF01402 Ribbon-helix-helix protein, copG family BUM88_RS06645 PF01425 Amidase BUM88_RS06650 PF00497 Bacterial extracellular solute-binding proteins, family 3 BUM88_RS06655 PF00005 ABC transporter BUM88_RS06670 PF07690 Major Facilitator Superfamily BUM88_RS06675 PF03466 LysR substrate binding domain BUM88_RS06675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS06680 PF04717 Type VI secretion system, phage-baseplate injector BUM88_RS06680 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) BUM88_RS06680 PF13296 Putative type VI secretion system Rhs element Vgr BUM88_RS06705 PF04717 Type VI secretion system, phage-baseplate injector BUM88_RS06705 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) BUM88_RS06705 PF13296 Putative type VI secretion system Rhs element Vgr BUM88_RS06745 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath BUM88_RS06760 PF05947 Type VI secretion system, TssF BUM88_RS06775 PF06761 Intracellular multiplication and human macrophage-killing BUM88_RS06775 PF06744 Type VI secretion protein IcmF C-terminal BUM88_RS06775 PF14331 ImcF-related N-terminal domain BUM88_RS06785 PF18393 MotY N-terminal domain BUM88_RS06785 PF00691 OmpA family BUM88_RS06795 PF17871 AAA lid domain BUM88_RS06795 PF10431 C-terminal, D2-small domain, of ClpB protein BUM88_RS06795 PF07724 AAA domain (Cdc48 subfamily) BUM88_RS06795 PF00004 ATPase family associated with various cellular activities (AAA) BUM88_RS06800 PF06812 ImpA, N-terminal, type VI secretion system BUM88_RS06805 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE BUM88_RS06825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS06830 PF12796 Ankyrin repeats (3 copies) BUM88_RS06835 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BUM88_RS06840 PF07690 Major Facilitator Superfamily BUM88_RS06855 PF00392 Bacterial regulatory proteins, gntR family BUM88_RS06855 PF00155 Aminotransferase class I and II BUM88_RS06860 PF02677 Epoxyqueuosine reductase QueH BUM88_RS06870 PF09278 MerR, DNA binding BUM88_RS06870 PF00376 MerR family regulatory protein BUM88_RS06885 PF03313 Serine dehydratase alpha chain BUM88_RS06885 PF03315 Serine dehydratase beta chain BUM88_RS06900 PF00300 Histidine phosphatase superfamily (branch 1) BUM88_RS06930 PF09339 IclR helix-turn-helix domain BUM88_RS06930 PF01614 Bacterial transcriptional regulator BUM88_RS06940 PF00199 Catalase BUM88_RS06945 PF01292 Prokaryotic cytochrome b561 BUM88_RS06950 PF01425 Amidase BUM88_RS06960 PF00848 Ring hydroxylating alpha subunit (catalytic domain) BUM88_RS06960 PF00355 Rieske [2Fe-2S] domain BUM88_RS06970 PF00111 2Fe-2S iron-sulfur cluster binding domain BUM88_RS06970 PF00175 Oxidoreductase NAD-binding domain BUM88_RS06975 PF07690 Major Facilitator Superfamily BUM88_RS06990 PF01613 Flavin reductase like domain BUM88_RS06995 PF07690 Major Facilitator Superfamily BUM88_RS07005 PF00881 Nitroreductase family BUM88_RS07010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS07010 PF03466 LysR substrate binding domain BUM88_RS07015 PF02627 Carboxymuconolactone decarboxylase family BUM88_RS07020 PF01614 Bacterial transcriptional regulator BUM88_RS07020 PF09339 IclR helix-turn-helix domain BUM88_RS07025 PF01494 FAD binding domain BUM88_RS07030 PF07690 Major Facilitator Superfamily BUM88_RS07035 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BUM88_RS07035 PF02770 Acyl-CoA dehydrogenase, middle domain BUM88_RS07035 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BUM88_RS07040 PF02515 CoA-transferase family III BUM88_RS07045 PF09339 IclR helix-turn-helix domain BUM88_RS07050 PF00378 Enoyl-CoA hydratase/isomerase BUM88_RS07055 PF03060 Nitronate monooxygenase BUM88_RS07060 PF07690 Major Facilitator Superfamily BUM88_RS07065 PF09339 IclR helix-turn-helix domain BUM88_RS07070 PF02803 Thiolase, C-terminal domain BUM88_RS07070 PF00108 Thiolase, N-terminal domain BUM88_RS07085 PF00378 Enoyl-CoA hydratase/isomerase BUM88_RS07090 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BUM88_RS07090 PF02770 Acyl-CoA dehydrogenase, middle domain BUM88_RS07090 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BUM88_RS07095 PF07690 Major Facilitator Superfamily BUM88_RS07100 PF07690 Major Facilitator Superfamily BUM88_RS07105 PF01144 Coenzyme A transferase BUM88_RS07110 PF01144 Coenzyme A transferase BUM88_RS07120 PF07690 Major Facilitator Superfamily BUM88_RS07130 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BUM88_RS07130 PF12806 Acetyl-CoA dehydrogenase C-terminal like BUM88_RS07130 PF02770 Acyl-CoA dehydrogenase, middle domain BUM88_RS07130 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BUM88_RS07145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS07145 PF03466 LysR substrate binding domain BUM88_RS07150 PF00682 HMGL-like BUM88_RS07155 PF18140 Propionyl-coenzyme A carboxylase BT domain BUM88_RS07155 PF02785 Biotin carboxylase C-terminal domain BUM88_RS07155 PF00289 Biotin carboxylase, N-terminal domain BUM88_RS07155 PF00364 Biotin-requiring enzyme BUM88_RS07155 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BUM88_RS07160 PF00378 Enoyl-CoA hydratase/isomerase BUM88_RS07165 PF01039 Carboxyl transferase domain BUM88_RS07170 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BUM88_RS07170 PF02770 Acyl-CoA dehydrogenase, middle domain BUM88_RS07170 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BUM88_RS07175 PF00440 Bacterial regulatory proteins, tetR family BUM88_RS07180 PF13193 AMP-binding enzyme C-terminal domain BUM88_RS07180 PF00501 AMP-binding enzyme BUM88_RS07185 PF13649 Methyltransferase domain BUM88_RS07195 PF07690 Major Facilitator Superfamily BUM88_RS07210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS07210 PF03466 LysR substrate binding domain BUM88_RS07250 PF00199 Catalase BUM88_RS07250 PF06628 Catalase-related immune-responsive BUM88_RS07250 PF18011 C-terminal domain found in long catalases BUM88_RS07275 PF00717 Peptidase S24-like BUM88_RS07285 PF01037 Lrp/AsnC ligand binding domain BUM88_RS07285 PF13404 AsnC-type helix-turn-helix domain BUM88_RS07295 PF00512 His Kinase A (phospho-acceptor) domain BUM88_RS07295 PF09308 LuxQ, periplasmic BUM88_RS07295 PF00072 Response regulator receiver domain BUM88_RS07295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BUM88_RS07300 PF00072 Response regulator receiver domain BUM88_RS07305 PF02129 X-Pro dipeptidyl-peptidase (S15 family) BUM88_RS07315 PF03466 LysR substrate binding domain BUM88_RS07315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS07320 PF07690 Major Facilitator Superfamily BUM88_RS07335 PF00528 Binding-protein-dependent transport system inner membrane component BUM88_RS07340 PF00528 Binding-protein-dependent transport system inner membrane component BUM88_RS07345 PF00005 ABC transporter BUM88_RS07350 PF00497 Bacterial extracellular solute-binding proteins, family 3 BUM88_RS07355 PF00497 Bacterial extracellular solute-binding proteins, family 3 BUM88_RS07365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS07365 PF03466 LysR substrate binding domain BUM88_RS07370 PF02272 DHHA1 domain BUM88_RS07370 PF01411 tRNA synthetases class II (A) BUM88_RS07370 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BUM88_RS07375 PF01810 LysE type translocator BUM88_RS07380 PF00266 Aminotransferase class-V BUM88_RS07390 PF00132 Bacterial transferase hexapeptide (six repeats) BUM88_RS07395 PF00581 Rhodanese-like domain BUM88_RS07415 PF02798 Glutathione S-transferase, N-terminal domain BUM88_RS07420 PF14834 Glutathione S-transferase, C-terminal domain BUM88_RS07420 PF02798 Glutathione S-transferase, N-terminal domain BUM88_RS07425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS07425 PF03466 LysR substrate binding domain BUM88_RS07430 PF03788 LrgA family BUM88_RS07435 PF04172 LrgB-like family BUM88_RS07440 PF00155 Aminotransferase class I and II BUM88_RS07440 PF00392 Bacterial regulatory proteins, gntR family BUM88_RS07455 PF12833 Helix-turn-helix domain BUM88_RS07455 PF02311 AraC-like ligand binding domain BUM88_RS07460 PF01810 LysE type translocator BUM88_RS07470 PF16957 Malonate decarboxylase, alpha subunit, transporter BUM88_RS07480 PF06857 Malonate decarboxylase delta subunit (MdcD) BUM88_RS07485 PF01039 Carboxyl transferase domain BUM88_RS07495 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG BUM88_RS07500 PF00698 Acyl transferase domain BUM88_RS07515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS07515 PF03466 LysR substrate binding domain BUM88_RS07520 PF00392 Bacterial regulatory proteins, gntR family BUM88_RS07520 PF00155 Aminotransferase class I and II BUM88_RS07530 PF02322 Cytochrome bd terminal oxidase subunit II BUM88_RS07535 PF01654 Cytochrome bd terminal oxidase subunit I BUM88_RS07550 PF02770 Acyl-CoA dehydrogenase, middle domain BUM88_RS07550 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BUM88_RS07550 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BUM88_RS07555 PF00296 Luciferase-like monooxygenase BUM88_RS07560 PF00083 Sugar (and other) transporter BUM88_RS07570 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BUM88_RS07575 PF00005 ABC transporter BUM88_RS07580 PF00528 Binding-protein-dependent transport system inner membrane component BUM88_RS07585 PF02668 Taurine catabolism dioxygenase TauD, TfdA family BUM88_RS07590 PF01177 Asp/Glu/Hydantoin racemase BUM88_RS07595 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin BUM88_RS07605 PF03466 LysR substrate binding domain BUM88_RS07605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS07615 PF01979 Amidohydrolase family BUM88_RS07615 PF13382 Adenine deaminase C-terminal domain BUM88_RS07625 PF03960 ArsC family BUM88_RS07630 PF01022 Bacterial regulatory protein, arsR family BUM88_RS07640 PF01758 Sodium Bile acid symporter family BUM88_RS07645 PF03358 NADPH-dependent FMN reductase BUM88_RS07650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS07650 PF03466 LysR substrate binding domain BUM88_RS07665 PF07992 Pyridine nucleotide-disulphide oxidoreductase BUM88_RS07665 PF13192 Thioredoxin domain BUM88_RS07680 PF00132 Bacterial transferase hexapeptide (six repeats) BUM88_RS07685 PF00588 SpoU rRNA Methylase family BUM88_RS07690 PF07733 Bacterial DNA polymerase III alpha NTPase domain BUM88_RS07690 PF01336 OB-fold nucleic acid binding domain BUM88_RS07690 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BUM88_RS07690 PF02811 PHP domain BUM88_RS07690 PF14579 Helix-hairpin-helix motif BUM88_RS07695 PF00710 Asparaginase, N-terminal BUM88_RS07695 PF17763 Glutaminase/Asparaginase C-terminal domain BUM88_RS07700 PF00375 Sodium:dicarboxylate symporter family BUM88_RS07705 PF00155 Aminotransferase class I and II BUM88_RS07710 PF01641 SelR domain BUM88_RS07715 PF00255 Glutathione peroxidase BUM88_RS07720 PF12833 Helix-turn-helix domain BUM88_RS07720 PF02311 AraC-like ligand binding domain BUM88_RS07730 PF00155 Aminotransferase class I and II BUM88_RS07735 PF01909 Nucleotidyltransferase domain BUM88_RS07735 PF01966 HD domain BUM88_RS07735 PF08335 GlnD PII-uridylyltransferase BUM88_RS07740 PF02222 ATP-grasp domain BUM88_RS07750 PF05437 Branched-chain amino acid transport protein (AzlD) BUM88_RS07755 PF03591 AzlC protein BUM88_RS07780 PF06071 Protein of unknown function (DUF933) BUM88_RS07780 PF01926 50S ribosome-binding GTPase BUM88_RS07785 PF00528 Binding-protein-dependent transport system inner membrane component BUM88_RS07790 PF09383 NIL domain BUM88_RS07790 PF00005 ABC transporter BUM88_RS07795 PF03180 NLPA lipoprotein BUM88_RS07800 PF03180 NLPA lipoprotein BUM88_RS07805 PF00296 Luciferase-like monooxygenase BUM88_RS07815 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BUM88_RS07815 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BUM88_RS07825 PF00497 Bacterial extracellular solute-binding proteins, family 3 BUM88_RS07830 PF00528 Binding-protein-dependent transport system inner membrane component BUM88_RS07835 PF00528 Binding-protein-dependent transport system inner membrane component BUM88_RS07840 PF00005 ABC transporter BUM88_RS07850 PF01037 Lrp/AsnC ligand binding domain BUM88_RS07855 PF01709 Transcriptional regulator BUM88_RS07865 PF00440 Bacterial regulatory proteins, tetR family BUM88_RS07875 PF13356 Arm DNA-binding domain BUM88_RS07875 PF00589 Phage integrase family BUM88_RS08030 PF00145 C-5 cytosine-specific DNA methylase BUM88_RS08160 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system BUM88_RS08170 PF10145 Phage-related minor tail protein BUM88_RS08170 PF01464 Transglycosylase SLT domain BUM88_RS08170 PF01551 Peptidase family M23 BUM88_RS08250 PF11798 IMS family HHH motif BUM88_RS08250 PF13438 Domain of unknown function (DUF4113) BUM88_RS08250 PF11799 impB/mucB/samB family C-terminal domain BUM88_RS08250 PF00817 impB/mucB/samB family BUM88_RS08255 PF00717 Peptidase S24-like BUM88_RS08270 PF03466 LysR substrate binding domain BUM88_RS08270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS08280 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin BUM88_RS08290 PF00892 EamA-like transporter family BUM88_RS08295 PF03466 LysR substrate binding domain BUM88_RS08295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS08305 PF12833 Helix-turn-helix domain BUM88_RS08305 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term BUM88_RS08320 PF00419 Fimbrial protein BUM88_RS08325 PF13954 PapC N-terminal domain BUM88_RS08325 PF00577 Outer membrane usher protein BUM88_RS08325 PF13953 PapC C-terminal domain BUM88_RS08330 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BUM88_RS08330 PF02753 Pili assembly chaperone PapD, C-terminal domain BUM88_RS08335 PF16970 Type-1 fimbrial protein, A BUM88_RS08350 PF04055 Radical SAM superfamily BUM88_RS08350 PF06968 Biotin and Thiamin Synthesis associated domain BUM88_RS08355 PF08331 Domain of unknown function (DUF1730) BUM88_RS08360 PF03853 YjeF-related protein N-terminus BUM88_RS08360 PF01256 Carbohydrate kinase BUM88_RS08365 PF02075 Crossover junction endodeoxyribonuclease RuvC BUM88_RS08380 PF00905 Penicillin binding protein transpeptidase domain BUM88_RS08400 PF00438 S-adenosylmethionine synthetase, N-terminal domain BUM88_RS08400 PF02772 S-adenosylmethionine synthetase, central domain BUM88_RS08400 PF02773 S-adenosylmethionine synthetase, C-terminal domain BUM88_RS08405 PF02780 Transketolase, C-terminal domain BUM88_RS08405 PF00456 Transketolase, thiamine diphosphate binding domain BUM88_RS08405 PF02779 Transketolase, pyrimidine binding domain BUM88_RS08415 PF04264 YceI-like domain BUM88_RS08425 PF09992 Phosphodiester glycosidase BUM88_RS08435 PF05958 tRNA (Uracil-5-)-methyltransferase BUM88_RS08440 PF04229 GrpB protein BUM88_RS08445 PF01619 Proline dehydrogenase BUM88_RS08445 PF18327 Proline utilization A proline dehydrogenase N-terminal domain BUM88_RS08445 PF00171 Aldehyde dehydrogenase family BUM88_RS08445 PF14850 DNA-binding domain of Proline dehydrogenase BUM88_RS08450 PF01037 Lrp/AsnC ligand binding domain BUM88_RS08455 PF00474 Sodium:solute symporter family BUM88_RS08460 PF02146 Sir2 family BUM88_RS08465 PF01597 Glycine cleavage H-protein BUM88_RS08470 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term BUM88_RS08470 PF12833 Helix-turn-helix domain BUM88_RS08480 PF00664 ABC transporter transmembrane region BUM88_RS08480 PF00005 ABC transporter BUM88_RS08485 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) BUM88_RS08490 PF06912 Protein of unknown function (DUF1275) BUM88_RS08495 PF00375 Sodium:dicarboxylate symporter family BUM88_RS08510 PF08007 Cupin superfamily protein BUM88_RS08515 PF02545 Maf-like protein BUM88_RS08525 PF00162 Phosphoglycerate kinase BUM88_RS08535 PF01116 Fructose-bisphosphate aldolase class-II BUM88_RS08540 PF00639 PPIC-type PPIASE domain BUM88_RS08540 PF09312 SurA N-terminal domain BUM88_RS08545 PF03968 OstA-like protein BUM88_RS08545 PF04453 LPS transport system D BUM88_RS08550 PF01636 Phosphotransferase enzyme family BUM88_RS08555 PF00483 Nucleotidyl transferase BUM88_RS08560 PF02527 rRNA small subunit methyltransferase G BUM88_RS08565 PF13614 AAA domain BUM88_RS08570 PF02195 ParB-like nuclease domain BUM88_RS08570 PF17762 HTH domain found in ParB protein BUM88_RS08575 PF01618 MotA/TolQ/ExbB proton channel family BUM88_RS08585 PF00664 ABC transporter transmembrane region BUM88_RS08585 PF00005 ABC transporter BUM88_RS08590 PF02606 Tetraacyldisaccharide-1-P 4'-kinase BUM88_RS08595 PF02348 Cytidylyltransferase BUM88_RS08600 PF09115 DNA polymerase III, delta subunit, C terminal BUM88_RS08610 PF01026 TatD related DNase BUM88_RS08625 PF02501 Type II secretion system (T2SS), protein I BUM88_RS08625 PF07963 Prokaryotic N-terminal methylation motif BUM88_RS08630 PF07963 Prokaryotic N-terminal methylation motif BUM88_RS08630 PF11612 Type II secretion system (T2SS), protein J BUM88_RS08635 PF03934 Type II secretion system (T2SS), protein K BUM88_RS08645 PF03167 Uracil DNA glycosylase superfamily BUM88_RS08655 PF14437 MafB19-like deaminase BUM88_RS08665 PF02224 Cytidylate kinase BUM88_RS08670 PF00575 S1 RNA binding domain BUM88_RS08675 PF00216 Bacterial DNA-binding protein BUM88_RS08685 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BUM88_RS08690 PF03956 Lysine exporter LysO BUM88_RS08695 PF00743 Flavin-binding monooxygenase-like BUM88_RS08705 PF03969 AFG1-like ATPase BUM88_RS08710 PF01274 Malate synthase BUM88_RS08720 PF02472 Biopolymer transport protein ExbD/TolR BUM88_RS08725 PF02472 Biopolymer transport protein ExbD/TolR BUM88_RS08730 PF01618 MotA/TolQ/ExbB proton channel family BUM88_RS08740 PF00593 TonB dependent receptor BUM88_RS08740 PF07715 TonB-dependent Receptor Plug Domain BUM88_RS08750 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BUM88_RS08755 PF01432 Peptidase family M3 BUM88_RS08760 PF00528 Binding-protein-dependent transport system inner membrane component BUM88_RS08765 PF00528 Binding-protein-dependent transport system inner membrane component BUM88_RS08765 PF12911 N-terminal TM domain of oligopeptide transport permease C BUM88_RS08770 PF00005 ABC transporter BUM88_RS08770 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BUM88_RS08785 PF00459 Inositol monophosphatase family BUM88_RS08795 PF01649 Ribosomal protein S20 BUM88_RS08800 PF13460 NAD(P)H-binding BUM88_RS08805 PF03737 Aldolase/RraA BUM88_RS08825 PF00271 Helicase conserved C-terminal domain BUM88_RS08825 PF03461 TRCF domain BUM88_RS08825 PF02559 CarD-like/TRCF domain BUM88_RS08825 PF00270 DEAD/DEAH box helicase BUM88_RS08825 PF17757 UvrB interaction domain BUM88_RS08835 PF00211 Adenylate and Guanylate cyclase catalytic domain BUM88_RS08840 PF00111 2Fe-2S iron-sulfur cluster binding domain BUM88_RS08845 PF00012 Hsp70 protein BUM88_RS08850 PF00226 DnaJ domain BUM88_RS08850 PF07743 HSCB C-terminal oligomerisation domain BUM88_RS08855 PF01521 Iron-sulphur cluster biosynthesis BUM88_RS08860 PF01592 NifU-like N terminal domain BUM88_RS08865 PF00266 Aminotransferase class-V BUM88_RS08870 PF02082 Transcriptional regulator BUM88_RS08885 PF00216 Bacterial DNA-binding protein BUM88_RS08890 PF00639 PPIC-type PPIASE domain BUM88_RS08890 PF09312 SurA N-terminal domain BUM88_RS08895 PF12833 Helix-turn-helix domain BUM88_RS08895 PF12852 Cupin BUM88_RS08900 PF00487 Fatty acid desaturase BUM88_RS08905 PF02770 Acyl-CoA dehydrogenase, middle domain BUM88_RS08905 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BUM88_RS08905 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BUM88_RS08910 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BUM88_RS08910 PF02770 Acyl-CoA dehydrogenase, middle domain BUM88_RS08910 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BUM88_RS08915 PF03109 ABC1 family BUM88_RS08925 PF04073 Aminoacyl-tRNA editing domain BUM88_RS08930 PF00593 TonB dependent receptor BUM88_RS08930 PF07715 TonB-dependent Receptor Plug Domain BUM88_RS08950 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase BUM88_RS08955 PF02277 Phosphoribosyltransferase BUM88_RS08960 PF00300 Histidine phosphatase superfamily (branch 1) BUM88_RS08970 PF02654 Cobalamin-5-phosphate synthase BUM88_RS08975 PF00793 DAHP synthetase I family BUM88_RS08980 PF01925 Sulfite exporter TauE/SafE BUM88_RS09000 PF07715 TonB-dependent Receptor Plug Domain BUM88_RS09000 PF00593 TonB dependent receptor BUM88_RS09005 PF02684 Lipid-A-disaccharide synthetase BUM88_RS09030 PF01230 HIT domain BUM88_RS09050 PF01053 Cys/Met metabolism PLP-dependent enzyme BUM88_RS09060 PF02575 YbaB/EbfC DNA-binding family BUM88_RS09065 PF02132 RecR protein BUM88_RS09065 PF13662 Toprim domain BUM88_RS09070 PF00570 HRDC domain BUM88_RS09070 PF01612 3'-5' exonuclease BUM88_RS09075 PF02525 Flavodoxin-like fold BUM88_RS09080 PF03466 LysR substrate binding domain BUM88_RS09080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS09100 PF05166 YcgL domain BUM88_RS09110 PF00004 ATPase family associated with various cellular activities (AAA) BUM88_RS09110 PF17862 AAA+ lid domain BUM88_RS09110 PF01434 Peptidase family M41 BUM88_RS09120 PF00291 Pyridoxal-phosphate dependent enzyme BUM88_RS09125 PF05175 Methyltransferase small domain BUM88_RS09130 PF01264 Chorismate synthase BUM88_RS09140 PF08448 PAS fold BUM88_RS09140 PF00990 Diguanylate cyclase, GGDEF domain BUM88_RS09155 PF04055 Radical SAM superfamily BUM88_RS09160 PF00676 Dehydrogenase E1 component BUM88_RS09165 PF02779 Transketolase, pyrimidine binding domain BUM88_RS09165 PF02780 Transketolase, C-terminal domain BUM88_RS09170 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BUM88_RS09170 PF02817 e3 binding domain BUM88_RS09170 PF00364 Biotin-requiring enzyme BUM88_RS09175 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BUM88_RS09175 PF07992 Pyridine nucleotide-disulphide oxidoreductase BUM88_RS09180 PF00106 short chain dehydrogenase BUM88_RS09185 PF00107 Zinc-binding dehydrogenase BUM88_RS09185 PF08240 Alcohol dehydrogenase GroES-like domain BUM88_RS09200 PF00158 Sigma-54 interaction domain BUM88_RS09200 PF00072 Response regulator receiver domain BUM88_RS09200 PF02954 Bacterial regulatory protein, Fis family BUM88_RS09205 PF00753 Metallo-beta-lactamase superfamily BUM88_RS09205 PF04273 Putative phosphatase (DUF442) BUM88_RS09210 PF00753 Metallo-beta-lactamase superfamily BUM88_RS09210 PF04273 Putative phosphatase (DUF442) BUM88_RS09215 PF01925 Sulfite exporter TauE/SafE BUM88_RS09230 PF12833 Helix-turn-helix domain BUM88_RS09230 PF06445 GyrI-like small molecule binding domain BUM88_RS09240 PF07702 UTRA domain BUM88_RS09240 PF00392 Bacterial regulatory proteins, gntR family BUM88_RS09255 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BUM88_RS09260 PF00528 Binding-protein-dependent transport system inner membrane component BUM88_RS09265 PF00005 ABC transporter BUM88_RS09280 PF00083 Sugar (and other) transporter BUM88_RS09285 PF07715 TonB-dependent Receptor Plug Domain BUM88_RS09285 PF00593 TonB dependent receptor BUM88_RS09290 PF00206 Lyase BUM88_RS09290 PF10415 Fumarase C C-terminus BUM88_RS09305 PF03466 LysR substrate binding domain BUM88_RS09305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS09310 PF03466 LysR substrate binding domain BUM88_RS09310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS09315 PF02803 Thiolase, C-terminal domain BUM88_RS09315 PF00108 Thiolase, N-terminal domain BUM88_RS09320 PF02667 Short chain fatty acid transporter BUM88_RS09325 PF01144 Coenzyme A transferase BUM88_RS09330 PF01144 Coenzyme A transferase BUM88_RS09335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS09335 PF03466 LysR substrate binding domain BUM88_RS09400 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BUM88_RS09420 PF12833 Helix-turn-helix domain BUM88_RS09420 PF06719 AraC-type transcriptional regulator N-terminus BUM88_RS09425 PF07690 Major Facilitator Superfamily BUM88_RS09435 PF01738 Dienelactone hydrolase family BUM88_RS09450 PF01613 Flavin reductase like domain BUM88_RS09460 PF12833 Helix-turn-helix domain BUM88_RS09460 PF14525 AraC-binding-like domain BUM88_RS09465 PF00175 Oxidoreductase NAD-binding domain BUM88_RS09465 PF00111 2Fe-2S iron-sulfur cluster binding domain BUM88_RS09465 PF00970 Oxidoreductase FAD-binding domain BUM88_RS09470 PF00866 Ring hydroxylating beta subunit BUM88_RS09475 PF00355 Rieske [2Fe-2S] domain BUM88_RS09475 PF00848 Ring hydroxylating alpha subunit (catalytic domain) BUM88_RS09480 PF03459 TOBE domain BUM88_RS09480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS09490 PF00528 Binding-protein-dependent transport system inner membrane component BUM88_RS09495 PF03459 TOBE domain BUM88_RS09495 PF00005 ABC transporter BUM88_RS09515 PF01648 4'-phosphopantetheinyl transferase superfamily BUM88_RS09515 PF17837 4'-phosphopantetheinyl transferase N-terminal domain BUM88_RS09520 PF05977 Transmembrane secretion effector BUM88_RS09525 PF00501 AMP-binding enzyme BUM88_RS09525 PF13193 AMP-binding enzyme C-terminal domain BUM88_RS09525 PF00550 Phosphopantetheine attachment site BUM88_RS09525 PF00668 Condensation domain BUM88_RS09525 PF00975 Thioesterase domain BUM88_RS09530 PF03621 MbtH-like protein BUM88_RS09540 PF00106 short chain dehydrogenase BUM88_RS09545 PF00425 chorismate binding enzyme BUM88_RS09550 PF13193 AMP-binding enzyme C-terminal domain BUM88_RS09550 PF00501 AMP-binding enzyme BUM88_RS09555 PF00550 Phosphopantetheine attachment site BUM88_RS09555 PF00857 Isochorismatase family BUM88_RS09560 PF00873 AcrB/AcrD/AcrF family BUM88_RS09565 PF07715 TonB-dependent Receptor Plug Domain BUM88_RS09565 PF00593 TonB dependent receptor BUM88_RS09575 PF00149 Calcineurin-like phosphoesterase BUM88_RS09580 PF08042 PqqA family BUM88_RS09585 PF12706 Beta-lactamase superfamily domain BUM88_RS09590 PF03070 TENA/THI-4/PQQC family BUM88_RS09595 PF05402 Coenzyme PQQ synthesis protein D (PqqD) BUM88_RS09600 PF04055 Radical SAM superfamily BUM88_RS09600 PF13186 Iron-sulfur cluster-binding domain BUM88_RS09605 PF01244 Membrane dipeptidase (Peptidase family M19) BUM88_RS09620 PF00873 AcrB/AcrD/AcrF family BUM88_RS09625 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BUM88_RS09625 PF00529 HlyD membrane-fusion protein of T1SS BUM88_RS09630 PF00486 Transcriptional regulatory protein, C terminal BUM88_RS09630 PF00072 Response regulator receiver domain BUM88_RS09635 PF00672 HAMP domain BUM88_RS09635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BUM88_RS09635 PF00512 His Kinase A (phospho-acceptor) domain BUM88_RS09645 PF13091 PLD-like domain BUM88_RS09665 PF00199 Catalase BUM88_RS09675 PF08240 Alcohol dehydrogenase GroES-like domain BUM88_RS09675 PF00107 Zinc-binding dehydrogenase BUM88_RS09690 PF00577 Outer membrane usher protein BUM88_RS09690 PF13953 PapC C-terminal domain BUM88_RS09690 PF13954 PapC N-terminal domain BUM88_RS09695 PF02753 Pili assembly chaperone PapD, C-terminal domain BUM88_RS09695 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BUM88_RS09700 PF16970 Type-1 fimbrial protein, A BUM88_RS09720 PF00296 Luciferase-like monooxygenase BUM88_RS09725 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BUM88_RS09730 PF00528 Binding-protein-dependent transport system inner membrane component BUM88_RS09735 PF00528 Binding-protein-dependent transport system inner membrane component BUM88_RS09735 PF12911 N-terminal TM domain of oligopeptide transport permease C BUM88_RS09740 PF00005 ABC transporter BUM88_RS09740 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BUM88_RS09745 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BUM88_RS09745 PF02770 Acyl-CoA dehydrogenase, middle domain BUM88_RS09745 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BUM88_RS09755 PF00005 ABC transporter BUM88_RS09755 PF00664 ABC transporter transmembrane region BUM88_RS09760 PF00664 ABC transporter transmembrane region BUM88_RS09760 PF00005 ABC transporter BUM88_RS09765 PF07715 TonB-dependent Receptor Plug Domain BUM88_RS09765 PF00593 TonB dependent receptor BUM88_RS09775 PF00296 Luciferase-like monooxygenase BUM88_RS09780 PF00158 Sigma-54 interaction domain BUM88_RS09785 PF00902 Sec-independent protein translocase protein (TatC) BUM88_RS09790 PF02416 mttA/Hcf106 family BUM88_RS09795 PF02416 mttA/Hcf106 family BUM88_RS09800 PF00005 ABC transporter BUM88_RS09805 PF00528 Binding-protein-dependent transport system inner membrane component BUM88_RS09810 PF00528 Binding-protein-dependent transport system inner membrane component BUM88_RS09815 PF09084 NMT1/THI5 like BUM88_RS09820 PF00296 Luciferase-like monooxygenase BUM88_RS09825 PF03544 Gram-negative bacterial TonB protein C-terminal BUM88_RS09830 PF01618 MotA/TolQ/ExbB proton channel family BUM88_RS09835 PF02472 Biopolymer transport protein ExbD/TolR BUM88_RS09840 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BUM88_RS09850 PF00593 TonB dependent receptor BUM88_RS09850 PF07715 TonB-dependent Receptor Plug Domain BUM88_RS09855 PF00296 Luciferase-like monooxygenase BUM88_RS09865 PF09905 DNA-binding protein VF530 BUM88_RS09870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS09870 PF03466 LysR substrate binding domain BUM88_RS09880 PF00465 Iron-containing alcohol dehydrogenase BUM88_RS09890 PF00083 Sugar (and other) transporter BUM88_RS09895 PF17760 UvrA interaction domain BUM88_RS09895 PF00005 ABC transporter BUM88_RS09895 PF17755 UvrA DNA-binding domain BUM88_RS09910 PF07969 Amidohydrolase family BUM88_RS09945 PF02824 TGS domain BUM88_RS09945 PF04607 Region found in RelA / SpoT proteins BUM88_RS09945 PF13291 ACT domain BUM88_RS09970 PF07690 Major Facilitator Superfamily BUM88_RS09975 PF13533 Biotin-lipoyl like BUM88_RS09980 PF01425 Amidase BUM88_RS10015 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BUM88_RS10020 PF14572 Phosphoribosyl synthetase-associated domain BUM88_RS10020 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BUM88_RS10025 PF03466 LysR substrate binding domain BUM88_RS10025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS10030 PF00375 Sodium:dicarboxylate symporter family BUM88_RS10040 PF01810 LysE type translocator BUM88_RS10045 PF01613 Flavin reductase like domain BUM88_RS10050 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BUM88_RS10055 PF11066 Protein of unknown function (DUF2867) BUM88_RS10055 PF13460 NAD(P)H-binding BUM88_RS10060 PF00106 short chain dehydrogenase BUM88_RS10070 PF00248 Aldo/keto reductase family BUM88_RS10075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS10075 PF03466 LysR substrate binding domain BUM88_RS10090 PF00005 ABC transporter BUM88_RS10095 PF01032 FecCD transport family BUM88_RS10130 PF08240 Alcohol dehydrogenase GroES-like domain BUM88_RS10130 PF00107 Zinc-binding dehydrogenase BUM88_RS10145 PF06719 AraC-type transcriptional regulator N-terminus BUM88_RS10145 PF12833 Helix-turn-helix domain BUM88_RS10150 PF00313 'Cold-shock' DNA-binding domain BUM88_RS10170 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BUM88_RS10170 PF00529 HlyD membrane-fusion protein of T1SS BUM88_RS10175 PF00324 Amino acid permease BUM88_RS10180 PF00171 Aldehyde dehydrogenase family BUM88_RS10185 PF00202 Aminotransferase class-III BUM88_RS10190 PF03466 LysR substrate binding domain BUM88_RS10190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS10210 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) BUM88_RS10250 PF13193 AMP-binding enzyme C-terminal domain BUM88_RS10250 PF00501 AMP-binding enzyme BUM88_RS10260 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BUM88_RS10260 PF12806 Acetyl-CoA dehydrogenase C-terminal like BUM88_RS10260 PF02770 Acyl-CoA dehydrogenase, middle domain BUM88_RS10260 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BUM88_RS10265 PF01575 MaoC like domain BUM88_RS10270 PF00106 short chain dehydrogenase BUM88_RS10295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS10295 PF03466 LysR substrate binding domain BUM88_RS10345 PF01965 DJ-1/PfpI family BUM88_RS10350 PF12706 Beta-lactamase superfamily domain BUM88_RS10355 PF14278 Transcriptional regulator C-terminal region BUM88_RS10355 PF00440 Bacterial regulatory proteins, tetR family BUM88_RS10370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS10370 PF03466 LysR substrate binding domain BUM88_RS10380 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BUM88_RS10390 PF06314 Acetoacetate decarboxylase (ADC) BUM88_RS10400 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term BUM88_RS10400 PF12833 Helix-turn-helix domain BUM88_RS10405 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BUM88_RS10405 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BUM88_RS10410 PF07690 Major Facilitator Superfamily BUM88_RS10415 PF01370 NAD dependent epimerase/dehydratase family BUM88_RS10425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS10425 PF03466 LysR substrate binding domain BUM88_RS10435 PF00920 Dehydratase family BUM88_RS10440 PF00171 Aldehyde dehydrogenase family BUM88_RS10445 PF05368 NmrA-like family BUM88_RS10450 PF01638 HxlR-like helix-turn-helix BUM88_RS10455 PF01638 HxlR-like helix-turn-helix BUM88_RS10470 PF00561 alpha/beta hydrolase fold BUM88_RS10475 PF00561 alpha/beta hydrolase fold BUM88_RS10480 PF05199 GMC oxidoreductase BUM88_RS10485 PF00501 AMP-binding enzyme BUM88_RS10485 PF13193 AMP-binding enzyme C-terminal domain BUM88_RS10490 PF12146 Serine aminopeptidase, S33 BUM88_RS10495 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BUM88_RS10495 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BUM88_RS10495 PF00378 Enoyl-CoA hydratase/isomerase BUM88_RS10505 PF00106 short chain dehydrogenase BUM88_RS10510 PF14765 Polyketide synthase dehydratase BUM88_RS10510 PF00698 Acyl transferase domain BUM88_RS10510 PF00550 Phosphopantetheine attachment site BUM88_RS10510 PF08240 Alcohol dehydrogenase GroES-like domain BUM88_RS10510 PF08659 KR domain BUM88_RS10540 PF08359 YsiA-like protein, C-terminal region BUM88_RS10540 PF00440 Bacterial regulatory proteins, tetR family BUM88_RS10545 PF12706 Beta-lactamase superfamily domain BUM88_RS10560 PF07992 Pyridine nucleotide-disulphide oxidoreductase BUM88_RS10570 PF00561 alpha/beta hydrolase fold BUM88_RS10575 PF00171 Aldehyde dehydrogenase family BUM88_RS10585 PF07690 Major Facilitator Superfamily BUM88_RS10590 PF00920 Dehydratase family BUM88_RS10595 PF00392 Bacterial regulatory proteins, gntR family BUM88_RS10595 PF07729 FCD domain BUM88_RS10605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS10605 PF03466 LysR substrate binding domain BUM88_RS10610 PF13378 Enolase C-terminal domain-like BUM88_RS10610 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BUM88_RS10615 PF02426 Muconolactone delta-isomerase BUM88_RS10620 PF00775 Dioxygenase BUM88_RS10620 PF04444 Catechol dioxygenase N terminus BUM88_RS10625 PF01144 Coenzyme A transferase BUM88_RS10630 PF01144 Coenzyme A transferase BUM88_RS10635 PF00108 Thiolase, N-terminal domain BUM88_RS10635 PF02803 Thiolase, C-terminal domain BUM88_RS10640 PF12146 Serine aminopeptidase, S33 BUM88_RS10645 PF01804 Penicillin amidase BUM88_RS10650 PF00171 Aldehyde dehydrogenase family BUM88_RS10660 PF01179 Copper amine oxidase, enzyme domain BUM88_RS10660 PF02727 Copper amine oxidase, N2 domain BUM88_RS10660 PF02728 Copper amine oxidase, N3 domain BUM88_RS10660 PF07833 Copper amine oxidase N-terminal domain BUM88_RS10665 PF12833 Helix-turn-helix domain BUM88_RS10665 PF02311 AraC-like ligand binding domain BUM88_RS10670 PF01613 Flavin reductase like domain BUM88_RS10675 PF00111 2Fe-2S iron-sulfur cluster binding domain BUM88_RS10675 PF00175 Oxidoreductase NAD-binding domain BUM88_RS10690 PF00355 Rieske [2Fe-2S] domain BUM88_RS10690 PF00848 Ring hydroxylating alpha subunit (catalytic domain) BUM88_RS10705 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BUM88_RS10710 PF01425 Amidase BUM88_RS10720 PF07690 Major Facilitator Superfamily BUM88_RS10730 PF00106 short chain dehydrogenase BUM88_RS10745 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BUM88_RS10745 PF02770 Acyl-CoA dehydrogenase, middle domain BUM88_RS10745 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BUM88_RS10750 PF03466 LysR substrate binding domain BUM88_RS10750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS10755 PF01614 Bacterial transcriptional regulator BUM88_RS10755 PF09339 IclR helix-turn-helix domain BUM88_RS10760 PF00753 Metallo-beta-lactamase superfamily BUM88_RS10770 PF04143 Sulphur transport BUM88_RS10780 PF01011 PQQ enzyme repeat BUM88_RS10780 PF13360 PQQ-like domain BUM88_RS10785 PF04966 Carbohydrate-selective porin, OprB family BUM88_RS10790 PF05048 Periplasmic copper-binding protein (NosD) BUM88_RS10795 PF01487 Type I 3-dehydroquinase BUM88_RS10800 PF00775 Dioxygenase BUM88_RS10805 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal BUM88_RS10805 PF00775 Dioxygenase BUM88_RS10810 PF02627 Carboxymuconolactone decarboxylase family BUM88_RS10815 PF07690 Major Facilitator Superfamily BUM88_RS10820 PF00561 alpha/beta hydrolase fold BUM88_RS10825 PF10397 Adenylosuccinate lyase C-terminus BUM88_RS10825 PF00206 Lyase BUM88_RS10830 PF00108 Thiolase, N-terminal domain BUM88_RS10830 PF02803 Thiolase, C-terminal domain BUM88_RS10835 PF01144 Coenzyme A transferase BUM88_RS10840 PF01144 Coenzyme A transferase BUM88_RS10845 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BUM88_RS10850 PF04977 Septum formation initiator BUM88_RS10855 PF00593 TonB dependent receptor BUM88_RS10855 PF07715 TonB-dependent Receptor Plug Domain BUM88_RS10870 PF04239 Protein of unknown function (DUF421) BUM88_RS10875 PF00113 Enolase, C-terminal TIM barrel domain BUM88_RS10875 PF03952 Enolase, N-terminal domain BUM88_RS10880 PF00793 DAHP synthetase I family BUM88_RS10885 PF06418 CTP synthase N-terminus BUM88_RS10885 PF00117 Glutamine amidotransferase class-I BUM88_RS10915 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BUM88_RS10915 PF07992 Pyridine nucleotide-disulphide oxidoreductase BUM88_RS10930 PF00793 DAHP synthetase I family BUM88_RS10935 PF02694 Uncharacterised BCR, YnfA/UPF0060 family BUM88_RS10940 PF10431 C-terminal, D2-small domain, of ClpB protein BUM88_RS10940 PF02861 Clp amino terminal domain, pathogenicity island component BUM88_RS10940 PF17871 AAA lid domain BUM88_RS10940 PF07724 AAA domain (Cdc48 subfamily) BUM88_RS10940 PF00004 ATPase family associated with various cellular activities (AAA) BUM88_RS10945 PF02617 ATP-dependent Clp protease adaptor protein ClpS BUM88_RS10955 PF02774 Semialdehyde dehydrogenase, dimerisation domain BUM88_RS10955 PF01118 Semialdehyde dehydrogenase, NAD binding domain BUM88_RS10970 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BUM88_RS10975 PF00585 C-terminal regulatory domain of Threonine dehydratase BUM88_RS10975 PF00291 Pyridoxal-phosphate dependent enzyme BUM88_RS10980 PF02080 TrkA-C domain BUM88_RS10980 PF02254 TrkA-N domain BUM88_RS10985 PF02386 Cation transport protein BUM88_RS10990 PF02253 Phospholipase A1 BUM88_RS10995 PF08367 Peptidase M16C associated BUM88_RS10995 PF00675 Insulinase (Peptidase family M16) BUM88_RS10995 PF05193 Peptidase M16 inactive domain BUM88_RS11000 PF07715 TonB-dependent Receptor Plug Domain BUM88_RS11000 PF00593 TonB dependent receptor BUM88_RS11005 PF00294 pfkB family carbohydrate kinase BUM88_RS11015 PF07290 Protein of unknown function (DUF1449) BUM88_RS11025 PF01654 Cytochrome bd terminal oxidase subunit I BUM88_RS11030 PF02322 Cytochrome bd terminal oxidase subunit II BUM88_RS11035 PF08173 Membrane bound YbgT-like protein BUM88_RS11060 PF02881 SRP54-type protein, helical bundle domain BUM88_RS11060 PF00448 SRP54-type protein, GTPase domain BUM88_RS11085 PF01380 SIS domain BUM88_RS11085 PF00571 CBS domain BUM88_RS11090 PF00202 Aminotransferase class-III BUM88_RS11095 PF00462 Glutaredoxin BUM88_RS11105 PF03466 LysR substrate binding domain BUM88_RS11105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS11110 PF00557 Metallopeptidase family M24 BUM88_RS11115 PF05525 Branched-chain amino acid transport protein BUM88_RS11120 PF03928 Haem-degrading BUM88_RS11140 PF02896 PEP-utilising enzyme, TIM barrel domain BUM88_RS11140 PF00391 PEP-utilising enzyme, mobile domain BUM88_RS11140 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BUM88_RS11140 PF00381 PTS HPr component phosphorylation site BUM88_RS11140 PF05524 PEP-utilising enzyme, N-terminal BUM88_RS11145 PF00294 pfkB family carbohydrate kinase BUM88_RS11150 PF02378 Phosphotransferase system, EIIC BUM88_RS11150 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BUM88_RS11165 PF03707 Bacterial signalling protein N terminal repeat BUM88_RS11165 PF00563 EAL domain BUM88_RS11165 PF00990 Diguanylate cyclase, GGDEF domain BUM88_RS11175 PF07995 Glucose / Sorbosone dehydrogenase BUM88_RS11180 PF00916 Sulfate permease family BUM88_RS11180 PF01740 STAS domain BUM88_RS11185 PF05922 Peptidase inhibitor I9 BUM88_RS11185 PF00082 Subtilase family BUM88_RS11200 PF00324 Amino acid permease BUM88_RS11205 PF00266 Aminotransferase class-V BUM88_RS11210 PF01037 Lrp/AsnC ligand binding domain BUM88_RS11225 PF13419 Haloacid dehalogenase-like hydrolase BUM88_RS11230 PF01479 S4 domain BUM88_RS11235 PF00154 recA bacterial DNA recombination protein BUM88_RS11240 PF02631 RecX family BUM88_RS11255 PF00132 Bacterial transferase hexapeptide (six repeats) BUM88_RS11255 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 BUM88_RS11260 PF07977 FabA-like domain BUM88_RS11265 PF00132 Bacterial transferase hexapeptide (six repeats) BUM88_RS11265 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD BUM88_RS11275 PF01103 Surface antigen BUM88_RS11275 PF07244 Surface antigen variable number repeat BUM88_RS11280 PF02163 Peptidase family M50 BUM88_RS11280 PF13180 PDZ domain BUM88_RS11280 PF17820 PDZ domain BUM88_RS11285 PF13288 DXP reductoisomerase C-terminal domain BUM88_RS11285 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BUM88_RS11285 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BUM88_RS11295 PF01255 Putative undecaprenyl diphosphate synthase BUM88_RS11300 PF01765 Ribosome recycling factor BUM88_RS11305 PF00696 Amino acid kinase family BUM88_RS11310 PF04055 Radical SAM superfamily BUM88_RS11310 PF18693 TRAM domain BUM88_RS11310 PF00919 Uncharacterized protein family UPF0004 BUM88_RS11320 PF00512 His Kinase A (phospho-acceptor) domain BUM88_RS11320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BUM88_RS11320 PF00989 PAS fold BUM88_RS11325 PF00072 Response regulator receiver domain BUM88_RS11325 PF02954 Bacterial regulatory protein, Fis family BUM88_RS11325 PF00158 Sigma-54 interaction domain BUM88_RS11330 PF00440 Bacterial regulatory proteins, tetR family BUM88_RS11335 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BUM88_RS11335 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BUM88_RS11345 PF02542 YgbB family BUM88_RS11355 PF01266 FAD dependent oxidoreductase BUM88_RS11365 PF00857 Isochorismatase family BUM88_RS11380 PF10415 Fumarase C C-terminus BUM88_RS11380 PF00206 Lyase BUM88_RS11385 PF16363 GDP-mannose 4,6 dehydratase BUM88_RS11390 PF02635 DsrE/DsrF-like family BUM88_RS11410 PF00892 EamA-like transporter family BUM88_RS11415 PF00392 Bacterial regulatory proteins, gntR family BUM88_RS11415 PF00155 Aminotransferase class I and II BUM88_RS11420 PF01638 HxlR-like helix-turn-helix BUM88_RS11425 PF00994 Probable molybdopterin binding domain BUM88_RS11425 PF03453 MoeA N-terminal region (domain I and II) BUM88_RS11425 PF03454 MoeA C-terminal region (domain IV) BUM88_RS11430 PF01967 MoaC family BUM88_RS11430 PF00994 Probable molybdopterin binding domain BUM88_RS11435 PF02391 MoaE protein BUM88_RS11445 PF06463 Molybdenum Cofactor Synthesis C BUM88_RS11445 PF04055 Radical SAM superfamily BUM88_RS11450 PF00384 Molybdopterin oxidoreductase BUM88_RS11450 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BUM88_RS11450 PF01568 Molydopterin dinucleotide binding domain BUM88_RS11455 PF12804 MobA-like NTP transferase domain BUM88_RS11460 PF01568 Molydopterin dinucleotide binding domain BUM88_RS11460 PF00384 Molybdopterin oxidoreductase BUM88_RS11460 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BUM88_RS11460 PF04324 BFD-like [2Fe-2S] binding domain BUM88_RS11465 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BUM88_RS11465 PF18267 Rubredoxin NAD+ reductase C-terminal domain BUM88_RS11465 PF07992 Pyridine nucleotide-disulphide oxidoreductase BUM88_RS11465 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BUM88_RS11465 PF04324 BFD-like [2Fe-2S] binding domain BUM88_RS11470 PF07992 Pyridine nucleotide-disulphide oxidoreductase BUM88_RS11470 PF18267 Rubredoxin NAD+ reductase C-terminal domain BUM88_RS11470 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BUM88_RS11470 PF04324 BFD-like [2Fe-2S] binding domain BUM88_RS11470 PF13806 Rieske-like [2Fe-2S] domain BUM88_RS11470 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BUM88_RS11485 PF00005 ABC transporter BUM88_RS11495 PF00291 Pyridoxal-phosphate dependent enzyme BUM88_RS11500 PF02423 Ornithine cyclodeaminase/mu-crystallin family BUM88_RS11505 PF06276 Ferric iron reductase FhuF-like transporter BUM88_RS11505 PF04183 IucA / IucC family BUM88_RS11510 PF07690 Major Facilitator Superfamily BUM88_RS11515 PF04183 IucA / IucC family BUM88_RS11515 PF06276 Ferric iron reductase FhuF-like transporter BUM88_RS11520 PF03328 HpcH/HpaI aldolase/citrate lyase family BUM88_RS11525 PF00593 TonB dependent receptor BUM88_RS11525 PF07715 TonB-dependent Receptor Plug Domain BUM88_RS11530 PF13438 Domain of unknown function (DUF4113) BUM88_RS11530 PF00817 impB/mucB/samB family BUM88_RS11530 PF11799 impB/mucB/samB family C-terminal domain BUM88_RS11535 PF01220 Dehydroquinase class II BUM88_RS11540 PF00364 Biotin-requiring enzyme BUM88_RS11545 PF00289 Biotin carboxylase, N-terminal domain BUM88_RS11545 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BUM88_RS11545 PF02785 Biotin carboxylase C-terminal domain BUM88_RS11555 PF12832 MFS_1 like family BUM88_RS11565 PF13953 PapC C-terminal domain BUM88_RS11565 PF13954 PapC N-terminal domain BUM88_RS11565 PF00577 Outer membrane usher protein BUM88_RS11585 PF01645 Conserved region in glutamate synthase BUM88_RS11610 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BUM88_RS11610 PF01565 FAD binding domain BUM88_RS11615 PF01451 Low molecular weight phosphotyrosine protein phosphatase BUM88_RS11620 PF01757 Acyltransferase family BUM88_RS11635 PF00465 Iron-containing alcohol dehydrogenase BUM88_RS11640 PF03061 Thioesterase superfamily BUM88_RS11645 PF05506 Domain of unknown function (DUF756) BUM88_RS11645 PF04185 Phosphoesterase family BUM88_RS11650 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding BUM88_RS11650 PF12169 DNA polymerase III subunits gamma and tau domain III BUM88_RS11650 PF12170 DNA polymerase III tau subunit V interacting with alpha BUM88_RS11665 PF07690 Major Facilitator Superfamily BUM88_RS11680 PF01575 MaoC like domain BUM88_RS11690 PF00108 Thiolase, N-terminal domain BUM88_RS11690 PF02803 Thiolase, C-terminal domain BUM88_RS11700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS11700 PF03466 LysR substrate binding domain BUM88_RS11705 PF00923 Transaldolase/Fructose-6-phosphate aldolase BUM88_RS11710 PF01810 LysE type translocator BUM88_RS11715 PF01037 Lrp/AsnC ligand binding domain BUM88_RS11720 PF03594 Benzoate membrane transport protein BUM88_RS11740 PF00582 Universal stress protein family BUM88_RS11745 PF00005 ABC transporter BUM88_RS11745 PF12848 ABC transporter BUM88_RS11750 PF04151 Bacterial pre-peptidase C-terminal domain BUM88_RS11765 PF04076 Bacterial OB fold (BOF) protein BUM88_RS11780 PF03466 LysR substrate binding domain BUM88_RS11780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS11800 PF01638 HxlR-like helix-turn-helix BUM88_RS11855 PF00072 Response regulator receiver domain BUM88_RS11855 PF00486 Transcriptional regulatory protein, C terminal BUM88_RS11860 PF00512 His Kinase A (phospho-acceptor) domain BUM88_RS11860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BUM88_RS11860 PF00672 HAMP domain BUM88_RS11880 PF01810 LysE type translocator BUM88_RS11885 PF01817 Chorismate mutase type II BUM88_RS11910 PF00577 Outer membrane usher protein BUM88_RS11910 PF13954 PapC N-terminal domain BUM88_RS11910 PF13953 PapC C-terminal domain BUM88_RS11925 PF01433 Peptidase family M1 domain BUM88_RS11925 PF17432 Domain of unknown function (DUF3458_C) ARM repeats BUM88_RS11925 PF11940 Domain of unknown function (DUF3458) Ig-like fold BUM88_RS11940 PF02110 Hydroxyethylthiazole kinase family BUM88_RS11950 PF05970 PIF1-like helicase BUM88_RS11950 PF14493 Helix-turn-helix domain BUM88_RS11955 PF00465 Iron-containing alcohol dehydrogenase BUM88_RS11970 PF00171 Aldehyde dehydrogenase family BUM88_RS11975 PF13520 Amino acid permease BUM88_RS11980 PF06751 Ethanolamine ammonia lyase large subunit (EutB) BUM88_RS11985 PF05985 Ethanolamine ammonia-lyase light chain (EutC) BUM88_RS11990 PF00958 GMP synthase C terminal domain BUM88_RS11990 PF02540 NAD synthase BUM88_RS11990 PF00117 Glutamine amidotransferase class-I BUM88_RS11995 PF00749 tRNA synthetases class I (E and Q), catalytic domain BUM88_RS11995 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain BUM88_RS12000 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BUM88_RS12005 PF00149 Calcineurin-like phosphoesterase BUM88_RS12015 PF00881 Nitroreductase family BUM88_RS12025 PF17209 Hfq protein BUM88_RS12035 PF01119 DNA mismatch repair protein, C-terminal domain BUM88_RS12035 PF08676 MutL C terminal dimerisation domain BUM88_RS12040 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BUM88_RS12045 PF00849 RNA pseudouridylate synthase BUM88_RS12045 PF01479 S4 domain BUM88_RS12060 PF01479 S4 domain BUM88_RS12060 PF00849 RNA pseudouridylate synthase BUM88_RS12070 PF04284 Protein of unknown function (DUF441) BUM88_RS12075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS12075 PF03466 LysR substrate binding domain BUM88_RS12090 PF07690 Major Facilitator Superfamily BUM88_RS12095 PF00027 Cyclic nucleotide-binding domain BUM88_RS12095 PF00520 Ion transport protein BUM88_RS12105 PF00939 Sodium:sulfate symporter transmembrane region BUM88_RS12115 PF00330 Aconitase family (aconitate hydratase) BUM88_RS12115 PF11791 Aconitate B N-terminal domain BUM88_RS12115 PF06434 Aconitate hydratase 2 N-terminus BUM88_RS12130 PF10282 Lactonase, 7-bladed beta-propeller BUM88_RS12140 PF01103 Surface antigen BUM88_RS12140 PF07244 Surface antigen variable number repeat BUM88_RS12140 PF17243 POTRA domain TamA domain 1 BUM88_RS12145 PF07690 Major Facilitator Superfamily BUM88_RS12150 PF03232 Ubiquinone biosynthesis protein COQ7 BUM88_RS12160 PF00120 Glutamine synthetase, catalytic domain BUM88_RS12165 PF00486 Transcriptional regulatory protein, C terminal BUM88_RS12165 PF00072 Response regulator receiver domain BUM88_RS12170 PF02702 Osmosensitive K+ channel His kinase sensor domain BUM88_RS12170 PF00512 His Kinase A (phospho-acceptor) domain BUM88_RS12170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BUM88_RS12170 PF13493 Domain of unknown function (DUF4118) BUM88_RS12175 PF02669 K+-transporting ATPase, c chain BUM88_RS12185 PF03814 Potassium-transporting ATPase A subunit BUM88_RS12195 PF02152 Dihydroneopterin aldolase BUM88_RS12200 PF03109 ABC1 family BUM88_RS12205 PF00899 ThiF family BUM88_RS12210 PF01613 Flavin reductase like domain BUM88_RS12215 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BUM88_RS12215 PF02770 Acyl-CoA dehydrogenase, middle domain BUM88_RS12215 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BUM88_RS12220 PF00106 short chain dehydrogenase BUM88_RS12225 PF12833 Helix-turn-helix domain BUM88_RS12230 PF09084 NMT1/THI5 like BUM88_RS12235 PF00528 Binding-protein-dependent transport system inner membrane component BUM88_RS12240 PF13847 Methyltransferase domain BUM88_RS12240 PF17827 PrmC N-terminal domain BUM88_RS12245 PF00472 RF-1 domain BUM88_RS12245 PF03462 PCRF domain BUM88_RS12255 PF03466 LysR substrate binding domain BUM88_RS12255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS12270 PF00296 Luciferase-like monooxygenase BUM88_RS12280 PF13994 PgaD-like protein BUM88_RS12285 PF00535 Glycosyl transferase family 2 BUM88_RS12290 PF01522 Polysaccharide deacetylase BUM88_RS12290 PF14883 Hypothetical glycosyl hydrolase family 13 BUM88_RS12300 PF03618 Kinase/pyrophosphorylase BUM88_RS12305 PF02896 PEP-utilising enzyme, TIM barrel domain BUM88_RS12305 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BUM88_RS12305 PF00391 PEP-utilising enzyme, mobile domain BUM88_RS12315 PF06481 COX Aromatic Rich Motif BUM88_RS12315 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BUM88_RS12320 PF00115 Cytochrome C and Quinol oxidase polypeptide I BUM88_RS12325 PF00510 Cytochrome c oxidase subunit III BUM88_RS12330 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BUM88_RS12335 PF01040 UbiA prenyltransferase family BUM88_RS12340 PF01250 Ribosomal protein S6 BUM88_RS12345 PF01084 Ribosomal protein S18 BUM88_RS12350 PF01281 Ribosomal protein L9, N-terminal domain BUM88_RS12350 PF03948 Ribosomal protein L9, C-terminal domain BUM88_RS12355 PF00772 DnaB-like helicase N terminal domain BUM88_RS12355 PF03796 DnaB-like helicase C terminal domain BUM88_RS12360 PF01168 Alanine racemase, N-terminal domain BUM88_RS12360 PF00842 Alanine racemase, C-terminal domain BUM88_RS12370 PF08379 Bacterial transglutaminase-like N-terminal region BUM88_RS12370 PF01841 Transglutaminase-like superfamily BUM88_RS12380 PF14403 Circularly permuted ATP-grasp type 2 BUM88_RS12390 PF13932 GidA associated domain BUM88_RS12390 PF01134 Glucose inhibited division protein A BUM88_RS12410 PF02954 Bacterial regulatory protein, Fis family BUM88_RS12415 PF01808 AICARFT/IMPCHase bienzyme BUM88_RS12415 PF02142 MGS-like domain BUM88_RS12420 PF02844 Phosphoribosylglycinamide synthetase, N domain BUM88_RS12420 PF02843 Phosphoribosylglycinamide synthetase, C domain BUM88_RS12420 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BUM88_RS12430 PF03180 NLPA lipoprotein BUM88_RS12435 PF00005 ABC transporter BUM88_RS12435 PF09383 NIL domain BUM88_RS12440 PF00528 Binding-protein-dependent transport system inner membrane component BUM88_RS12445 PF00753 Metallo-beta-lactamase superfamily BUM88_RS12445 PF16123 Hydroxyacylglutathione hydrolase C-terminus BUM88_RS12455 PF00375 Sodium:dicarboxylate symporter family BUM88_RS12470 PF13417 Glutathione S-transferase, N-terminal domain BUM88_RS12470 PF00043 Glutathione S-transferase, C-terminal domain BUM88_RS12480 PF03466 LysR substrate binding domain BUM88_RS12480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS12485 PF07690 Major Facilitator Superfamily BUM88_RS12490 PF01494 FAD binding domain BUM88_RS12495 PF07995 Glucose / Sorbosone dehydrogenase BUM88_RS12520 PF03601 Conserved hypothetical protein 698 BUM88_RS12535 PF07690 Major Facilitator Superfamily BUM88_RS12540 PF05853 beta-keto acid cleavage enzyme BUM88_RS12545 PF02668 Taurine catabolism dioxygenase TauD, TfdA family BUM88_RS12550 PF00107 Zinc-binding dehydrogenase BUM88_RS12550 PF08240 Alcohol dehydrogenase GroES-like domain BUM88_RS12555 PF01177 Asp/Glu/Hydantoin racemase BUM88_RS12560 PF00293 NUDIX domain BUM88_RS12585 PF00072 Response regulator receiver domain BUM88_RS12585 PF00486 Transcriptional regulatory protein, C terminal BUM88_RS12590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BUM88_RS12590 PF00512 His Kinase A (phospho-acceptor) domain BUM88_RS12590 PF08521 Two-component sensor kinase N-terminal BUM88_RS12615 PF01593 Flavin containing amine oxidoreductase BUM88_RS12630 PF00512 His Kinase A (phospho-acceptor) domain BUM88_RS12630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BUM88_RS12630 PF00672 HAMP domain BUM88_RS12635 PF00486 Transcriptional regulatory protein, C terminal BUM88_RS12635 PF00072 Response regulator receiver domain BUM88_RS12645 PF00576 HIUase/Transthyretin family BUM88_RS12655 PF02470 MlaD protein BUM88_RS12660 PF04403 Paraquat-inducible protein A BUM88_RS12670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS12670 PF03466 LysR substrate binding domain BUM88_RS12685 PF06826 Predicted Permease Membrane Region BUM88_RS12685 PF02080 TrkA-C domain BUM88_RS12690 PF00155 Aminotransferase class I and II BUM88_RS12710 PF00083 Sugar (and other) transporter BUM88_RS12710 PF08946 Osmosensory transporter coiled coil BUM88_RS12720 PF00106 short chain dehydrogenase BUM88_RS12725 PF00999 Sodium/hydrogen exchanger family BUM88_RS12725 PF02254 TrkA-N domain BUM88_RS12730 PF03616 Sodium/glutamate symporter BUM88_RS12735 PF00561 alpha/beta hydrolase fold BUM88_RS12740 PF00487 Fatty acid desaturase BUM88_RS12745 PF12833 Helix-turn-helix domain BUM88_RS12745 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term BUM88_RS12750 PF00440 Bacterial regulatory proteins, tetR family BUM88_RS12770 PF01638 HxlR-like helix-turn-helix BUM88_RS12775 PF00106 short chain dehydrogenase BUM88_RS12780 PF00873 AcrB/AcrD/AcrF family BUM88_RS12790 PF13977 BetI-type transcriptional repressor, C-terminal BUM88_RS12790 PF00440 Bacterial regulatory proteins, tetR family BUM88_RS12795 PF02321 Outer membrane efflux protein BUM88_RS12805 PF01554 MatE BUM88_RS12835 PF00313 'Cold-shock' DNA-binding domain BUM88_RS12870 PF00814 Glycoprotease family BUM88_RS12875 PF01165 Ribosomal protein S21 BUM88_RS12880 PF09424 Yqey-like protein BUM88_RS12885 PF01435 Peptidase family M48 BUM88_RS12890 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BUM88_RS12890 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BUM88_RS12905 PF00156 Phosphoribosyl transferase domain BUM88_RS12910 PF02674 Colicin V production protein BUM88_RS12915 PF01180 Dihydroorotate dehydrogenase BUM88_RS12935 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BUM88_RS12935 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BUM88_RS12940 PF00881 Nitroreductase family BUM88_RS12950 PF00270 DEAD/DEAH box helicase BUM88_RS12950 PF00271 Helicase conserved C-terminal domain BUM88_RS12955 PF00313 'Cold-shock' DNA-binding domain BUM88_RS12965 PF04545 Sigma-70, region 4 BUM88_RS12965 PF00140 Sigma-70 factor, region 1.2 BUM88_RS12965 PF04542 Sigma-70 region 2 BUM88_RS12970 PF04241 Protein of unknown function (DUF423) BUM88_RS12980 PF05690 Thiazole biosynthesis protein ThiG BUM88_RS12990 PF03883 Peroxide stress protein YaaA BUM88_RS13000 PF06956 Regulator of RNA terminal phosphate cyclase BUM88_RS13000 PF00158 Sigma-54 interaction domain BUM88_RS13005 PF00753 Metallo-beta-lactamase superfamily BUM88_RS13010 PF01139 tRNA-splicing ligase RtcB BUM88_RS13025 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain BUM88_RS13025 PF01137 RNA 3'-terminal phosphate cyclase BUM88_RS13030 PF01546 Peptidase family M20/M25/M40 BUM88_RS13030 PF07687 Peptidase dimerisation domain BUM88_RS13040 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BUM88_RS13045 PF01842 ACT domain BUM88_RS13045 PF00800 Prephenate dehydratase BUM88_RS13045 PF01817 Chorismate mutase type II BUM88_RS13050 PF00756 Putative esterase BUM88_RS13060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BUM88_RS13060 PF02770 Acyl-CoA dehydrogenase, middle domain BUM88_RS13060 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BUM88_RS13065 PF00375 Sodium:dicarboxylate symporter family BUM88_RS13075 PF02885 Glycosyl transferase family, helical bundle domain BUM88_RS13075 PF00591 Glycosyl transferase family, a/b domain BUM88_RS13085 PF07023 Protein of unknown function (DUF1315) BUM88_RS13090 PF01513 ATP-NAD kinase BUM88_RS13095 PF14814 Bifunctional transglycosylase second domain BUM88_RS13095 PF00905 Penicillin binding protein transpeptidase domain BUM88_RS13095 PF00912 Transglycosylase BUM88_RS13105 PF00293 NUDIX domain BUM88_RS13115 PF08521 Two-component sensor kinase N-terminal BUM88_RS13115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BUM88_RS13115 PF00512 His Kinase A (phospho-acceptor) domain BUM88_RS13120 PF00486 Transcriptional regulatory protein, C terminal BUM88_RS13120 PF00072 Response regulator receiver domain BUM88_RS13130 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BUM88_RS13130 PF00437 Type II/IV secretion system protein BUM88_RS13140 PF18389 TrmO C-terminal domain BUM88_RS13140 PF01980 tRNA-methyltransferase O BUM88_RS13145 PF00175 Oxidoreductase NAD-binding domain BUM88_RS13145 PF00970 Oxidoreductase FAD-binding domain BUM88_RS13150 PF02567 Phenazine biosynthesis-like protein BUM88_RS13155 PF00155 Aminotransferase class I and II BUM88_RS13155 PF00392 Bacterial regulatory proteins, gntR family BUM88_RS13160 PF00893 Small Multidrug Resistance protein BUM88_RS13165 PF00005 ABC transporter BUM88_RS13170 PF00528 Binding-protein-dependent transport system inner membrane component BUM88_RS13175 PF00528 Binding-protein-dependent transport system inner membrane component BUM88_RS13180 PF00497 Bacterial extracellular solute-binding proteins, family 3 BUM88_RS13185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS13185 PF03466 LysR substrate binding domain BUM88_RS13195 PF13533 Biotin-lipoyl like BUM88_RS13200 PF00873 AcrB/AcrD/AcrF family BUM88_RS13205 PF02321 Outer membrane efflux protein BUM88_RS13210 PF00464 Serine hydroxymethyltransferase BUM88_RS13240 PF00005 ABC transporter BUM88_RS13245 PF01061 ABC-2 type transporter BUM88_RS13250 PF14489 QueF-like protein BUM88_RS13250 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term BUM88_RS13260 PF01098 Cell cycle protein BUM88_RS13265 PF13406 Transglycosylase SLT domain BUM88_RS13270 PF05036 Sporulation related domain BUM88_RS13270 PF03330 Lytic transglycolase BUM88_RS13290 PF12833 Helix-turn-helix domain BUM88_RS13300 PF00889 Elongation factor TS BUM88_RS13305 PF00318 Ribosomal protein S2 BUM88_RS13310 PF00557 Metallopeptidase family M24 BUM88_RS13320 PF07690 Major Facilitator Superfamily BUM88_RS13330 PF07992 Pyridine nucleotide-disulphide oxidoreductase BUM88_RS13330 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BUM88_RS13335 PF04055 Radical SAM superfamily BUM88_RS13340 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BUM88_RS13340 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BUM88_RS13340 PF09317 Domain of unknown function (DUF1974) BUM88_RS13345 PF02627 Carboxymuconolactone decarboxylase family BUM88_RS13355 PF05221 S-adenosyl-L-homocysteine hydrolase BUM88_RS13355 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BUM88_RS13360 PF02219 Methylenetetrahydrofolate reductase BUM88_RS13365 PF04452 RNA methyltransferase BUM88_RS13370 PF00563 EAL domain BUM88_RS13370 PF00990 Diguanylate cyclase, GGDEF domain BUM88_RS13370 PF03707 Bacterial signalling protein N terminal repeat BUM88_RS13375 PF00390 Malic enzyme, N-terminal domain BUM88_RS13375 PF03949 Malic enzyme, NAD binding domain BUM88_RS13375 PF01515 Phosphate acetyl/butaryl transferase BUM88_RS13380 PF12627 Probable RNA and SrmB- binding site of polymerase A BUM88_RS13380 PF01743 Poly A polymerase head domain BUM88_RS13385 PF13180 PDZ domain BUM88_RS13390 PF01784 NIF3 (NGG1p interacting factor 3) BUM88_RS13395 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BUM88_RS13395 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BUM88_RS13420 PF01040 UbiA prenyltransferase family BUM88_RS13425 PF04345 Chorismate lyase BUM88_RS13430 PF00120 Glutamine synthetase, catalytic domain BUM88_RS13430 PF03951 Glutamine synthetase, beta-Grasp domain BUM88_RS13435 PF00854 POT family BUM88_RS13450 PF00117 Glutamine amidotransferase class-I BUM88_RS13455 PF02885 Glycosyl transferase family, helical bundle domain BUM88_RS13455 PF00591 Glycosyl transferase family, a/b domain BUM88_RS13460 PF00218 Indole-3-glycerol phosphate synthase BUM88_RS13475 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BUM88_RS13475 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BUM88_RS13480 PF01799 [2Fe-2S] binding domain BUM88_RS13480 PF00111 2Fe-2S iron-sulfur cluster binding domain BUM88_RS13485 PF01227 GTP cyclohydrolase I BUM88_RS13490 PF00144 Beta-lactamase BUM88_RS13505 PF05675 Protein of unknown function (DUF817) BUM88_RS13510 PF01208 Uroporphyrinogen decarboxylase (URO-D) BUM88_RS13525 PF02678 Pirin BUM88_RS13525 PF17954 Quercetinase C-terminal cupin domain BUM88_RS13535 PF13309 HTH domain BUM88_RS13535 PF08348 YheO-like PAS domain BUM88_RS13540 PF00291 Pyridoxal-phosphate dependent enzyme BUM88_RS13545 PF02423 Ornithine cyclodeaminase/mu-crystallin family BUM88_RS13575 PF00313 'Cold-shock' DNA-binding domain BUM88_RS13595 PF04328 Selenoprotein, putative BUM88_RS13600 PF13722 5TM C-terminal transporter carbon starvation CstA BUM88_RS13600 PF02554 Carbon starvation protein CstA BUM88_RS13605 PF08207 Elongation factor P (EF-P) KOW-like domain BUM88_RS13605 PF01132 Elongation factor P (EF-P) OB domain BUM88_RS13605 PF09285 Elongation factor P, C-terminal BUM88_RS13610 PF04055 Radical SAM superfamily BUM88_RS13625 PF01197 Ribosomal protein L31 BUM88_RS13630 PF13593 SBF-like CPA transporter family (DUF4137) BUM88_RS13635 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BUM88_RS13640 PF07690 Major Facilitator Superfamily BUM88_RS13645 PF05362 Lon protease (S16) C-terminal proteolytic domain BUM88_RS13645 PF13654 AAA domain BUM88_RS13650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS13650 PF03466 LysR substrate binding domain BUM88_RS13655 PF01551 Peptidase family M23 BUM88_RS13655 PF01476 LysM domain BUM88_RS13660 PF01975 Survival protein SurE BUM88_RS13675 PF00768 D-alanyl-D-alanine carboxypeptidase BUM88_RS13675 PF07943 Penicillin-binding protein 5, C-terminal domain BUM88_RS13680 PF00132 Bacterial transferase hexapeptide (six repeats) BUM88_RS13690 PF13344 Haloacid dehalogenase-like hydrolase BUM88_RS13690 PF00293 NUDIX domain BUM88_RS13700 PF04356 Protein of unknown function (DUF489) BUM88_RS13705 PF00206 Lyase BUM88_RS13705 PF08328 Adenylosuccinate lyase C-terminal BUM88_RS13720 PF01343 Peptidase family S49 BUM88_RS13720 PF08496 Peptidase family S49 N-terminal BUM88_RS13725 PF00005 ABC transporter BUM88_RS13730 PF00528 Binding-protein-dependent transport system inner membrane component BUM88_RS13735 PF00528 Binding-protein-dependent transport system inner membrane component BUM88_RS13740 PF12849 PBP superfamily domain BUM88_RS13745 PF00324 Amino acid permease BUM88_RS13750 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BUM88_RS13750 PF00205 Thiamine pyrophosphate enzyme, central domain BUM88_RS13750 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BUM88_RS13755 PF01037 Lrp/AsnC ligand binding domain BUM88_RS13760 PF00171 Aldehyde dehydrogenase family BUM88_RS13765 PF00282 Pyridoxal-dependent decarboxylase conserved domain BUM88_RS13770 PF00202 Aminotransferase class-III BUM88_RS13790 PF00487 Fatty acid desaturase BUM88_RS13795 PF00175 Oxidoreductase NAD-binding domain BUM88_RS13795 PF00111 2Fe-2S iron-sulfur cluster binding domain BUM88_RS13795 PF00970 Oxidoreductase FAD-binding domain BUM88_RS13800 PF00440 Bacterial regulatory proteins, tetR family BUM88_RS13810 PF18339 RapA N-terminal Tudor like domain 1 BUM88_RS13810 PF18337 RapA N-terminal Tudor like domain BUM88_RS13810 PF00271 Helicase conserved C-terminal domain BUM88_RS13810 PF00176 SNF2 family N-terminal domain BUM88_RS13810 PF12137 RNA polymerase recycling family C-terminal BUM88_RS13815 PF00849 RNA pseudouridylate synthase BUM88_RS13825 PF00202 Aminotransferase class-III BUM88_RS13830 PF02581 Thiamine monophosphate synthase BUM88_RS13855 PF05193 Peptidase M16 inactive domain BUM88_RS13855 PF00675 Insulinase (Peptidase family M16) BUM88_RS13860 PF02567 Phenazine biosynthesis-like protein BUM88_RS13865 PF00375 Sodium:dicarboxylate symporter family BUM88_RS13870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS13870 PF03466 LysR substrate binding domain BUM88_RS13875 PF06779 Uncharacterised MFS-type transporter YbfB BUM88_RS13885 PF00180 Isocitrate/isopropylmalate dehydrogenase BUM88_RS13890 PF00849 RNA pseudouridylate synthase BUM88_RS13895 PF03971 Monomeric isocitrate dehydrogenase BUM88_RS13905 PF00768 D-alanyl-D-alanine carboxypeptidase BUM88_RS13905 PF07943 Penicillin-binding protein 5, C-terminal domain BUM88_RS13910 PF07992 Pyridine nucleotide-disulphide oxidoreductase BUM88_RS13915 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BUM88_RS13920 PF03441 FAD binding domain of DNA photolyase BUM88_RS13920 PF00875 DNA photolyase BUM88_RS13960 PF03060 Nitronate monooxygenase BUM88_RS13965 PF01207 Dihydrouridine synthase (Dus) BUM88_RS13970 PF07759 Protein of unknown function (DUF1615) BUM88_RS13980 PF01472 PUA domain BUM88_RS13980 PF00696 Amino acid kinase family BUM88_RS13985 PF01018 GTP1/OBG BUM88_RS13985 PF01926 50S ribosome-binding GTPase BUM88_RS14000 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BUM88_RS14000 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BUM88_RS14015 PF04851 Type III restriction enzyme, res subunit BUM88_RS14015 PF00271 Helicase conserved C-terminal domain BUM88_RS14015 PF02151 UvrB/uvrC motif BUM88_RS14015 PF12344 Ultra-violet resistance protein B BUM88_RS14015 PF17757 UvrB interaction domain BUM88_RS14025 PF00990 Diguanylate cyclase, GGDEF domain BUM88_RS14025 PF17151 Periplasmic sensor domain BUM88_RS14040 PF00155 Aminotransferase class I and II BUM88_RS14085 PF01040 UbiA prenyltransferase family BUM88_RS14090 PF04345 Chorismate lyase BUM88_RS14095 PF03951 Glutamine synthetase, beta-Grasp domain BUM88_RS14095 PF00120 Glutamine synthetase, catalytic domain BUM88_RS14100 PF00854 POT family BUM88_RS14115 PF00117 Glutamine amidotransferase class-I BUM88_RS14120 PF02885 Glycosyl transferase family, helical bundle domain BUM88_RS14120 PF00591 Glycosyl transferase family, a/b domain BUM88_RS14125 PF00218 Indole-3-glycerol phosphate synthase BUM88_RS14140 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BUM88_RS14140 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BUM88_RS14145 PF01799 [2Fe-2S] binding domain BUM88_RS14145 PF00111 2Fe-2S iron-sulfur cluster binding domain BUM88_RS14150 PF01227 GTP cyclohydrolase I BUM88_RS14155 PF00144 Beta-lactamase BUM88_RS14170 PF05675 Protein of unknown function (DUF817) BUM88_RS14175 PF01208 Uroporphyrinogen decarboxylase (URO-D) BUM88_RS14190 PF17954 Quercetinase C-terminal cupin domain BUM88_RS14190 PF02678 Pirin BUM88_RS14200 PF13309 HTH domain BUM88_RS14200 PF08348 YheO-like PAS domain BUM88_RS14205 PF00291 Pyridoxal-phosphate dependent enzyme BUM88_RS14210 PF02423 Ornithine cyclodeaminase/mu-crystallin family BUM88_RS14240 PF00313 'Cold-shock' DNA-binding domain BUM88_RS14260 PF04328 Selenoprotein, putative BUM88_RS14265 PF13722 5TM C-terminal transporter carbon starvation CstA BUM88_RS14265 PF02554 Carbon starvation protein CstA BUM88_RS14270 PF08207 Elongation factor P (EF-P) KOW-like domain BUM88_RS14270 PF01132 Elongation factor P (EF-P) OB domain BUM88_RS14270 PF09285 Elongation factor P, C-terminal BUM88_RS14275 PF04055 Radical SAM superfamily BUM88_RS14290 PF01197 Ribosomal protein L31 BUM88_RS14295 PF13593 SBF-like CPA transporter family (DUF4137) BUM88_RS14300 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BUM88_RS14305 PF07690 Major Facilitator Superfamily BUM88_RS14310 PF05362 Lon protease (S16) C-terminal proteolytic domain BUM88_RS14310 PF13654 AAA domain BUM88_RS14315 PF03466 LysR substrate binding domain BUM88_RS14315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS14320 PF01551 Peptidase family M23 BUM88_RS14320 PF01476 LysM domain BUM88_RS14325 PF01975 Survival protein SurE BUM88_RS14340 PF00768 D-alanyl-D-alanine carboxypeptidase BUM88_RS14340 PF07943 Penicillin-binding protein 5, C-terminal domain BUM88_RS14345 PF00132 Bacterial transferase hexapeptide (six repeats) BUM88_RS14355 PF00293 NUDIX domain BUM88_RS14355 PF13344 Haloacid dehalogenase-like hydrolase BUM88_RS14365 PF04356 Protein of unknown function (DUF489) BUM88_RS14370 PF08328 Adenylosuccinate lyase C-terminal BUM88_RS14370 PF00206 Lyase BUM88_RS14385 PF08496 Peptidase family S49 N-terminal BUM88_RS14385 PF01343 Peptidase family S49 BUM88_RS14390 PF00005 ABC transporter BUM88_RS14395 PF00528 Binding-protein-dependent transport system inner membrane component BUM88_RS14400 PF00528 Binding-protein-dependent transport system inner membrane component BUM88_RS14405 PF12849 PBP superfamily domain BUM88_RS14410 PF00324 Amino acid permease BUM88_RS14415 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BUM88_RS14415 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BUM88_RS14415 PF00205 Thiamine pyrophosphate enzyme, central domain BUM88_RS14420 PF01037 Lrp/AsnC ligand binding domain BUM88_RS14425 PF00171 Aldehyde dehydrogenase family BUM88_RS14430 PF00282 Pyridoxal-dependent decarboxylase conserved domain BUM88_RS14435 PF00202 Aminotransferase class-III BUM88_RS14455 PF00487 Fatty acid desaturase BUM88_RS14460 PF00970 Oxidoreductase FAD-binding domain BUM88_RS14460 PF00111 2Fe-2S iron-sulfur cluster binding domain BUM88_RS14460 PF00175 Oxidoreductase NAD-binding domain BUM88_RS14465 PF00440 Bacterial regulatory proteins, tetR family BUM88_RS14475 PF00271 Helicase conserved C-terminal domain BUM88_RS14475 PF12137 RNA polymerase recycling family C-terminal BUM88_RS14475 PF00176 SNF2 family N-terminal domain BUM88_RS14475 PF18339 RapA N-terminal Tudor like domain 1 BUM88_RS14475 PF18337 RapA N-terminal Tudor like domain BUM88_RS14480 PF00849 RNA pseudouridylate synthase BUM88_RS14490 PF00202 Aminotransferase class-III BUM88_RS14495 PF02581 Thiamine monophosphate synthase BUM88_RS14520 PF05193 Peptidase M16 inactive domain BUM88_RS14520 PF00675 Insulinase (Peptidase family M16) BUM88_RS14525 PF02567 Phenazine biosynthesis-like protein BUM88_RS14530 PF00375 Sodium:dicarboxylate symporter family BUM88_RS14535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS14535 PF03466 LysR substrate binding domain BUM88_RS14540 PF06779 Uncharacterised MFS-type transporter YbfB BUM88_RS14550 PF00180 Isocitrate/isopropylmalate dehydrogenase BUM88_RS14555 PF00849 RNA pseudouridylate synthase BUM88_RS14560 PF03971 Monomeric isocitrate dehydrogenase BUM88_RS14570 PF00768 D-alanyl-D-alanine carboxypeptidase BUM88_RS14570 PF07943 Penicillin-binding protein 5, C-terminal domain BUM88_RS14575 PF07992 Pyridine nucleotide-disulphide oxidoreductase BUM88_RS14580 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BUM88_RS14585 PF03441 FAD binding domain of DNA photolyase BUM88_RS14585 PF00875 DNA photolyase BUM88_RS14625 PF03060 Nitronate monooxygenase BUM88_RS14630 PF01207 Dihydrouridine synthase (Dus) BUM88_RS14635 PF07759 Protein of unknown function (DUF1615) BUM88_RS14645 PF01472 PUA domain BUM88_RS14645 PF00696 Amino acid kinase family BUM88_RS14650 PF01926 50S ribosome-binding GTPase BUM88_RS14650 PF01018 GTP1/OBG BUM88_RS14665 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BUM88_RS14665 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BUM88_RS14680 PF12344 Ultra-violet resistance protein B BUM88_RS14680 PF00271 Helicase conserved C-terminal domain BUM88_RS14680 PF17757 UvrB interaction domain BUM88_RS14680 PF04851 Type III restriction enzyme, res subunit BUM88_RS14680 PF02151 UvrB/uvrC motif BUM88_RS14690 PF17151 Periplasmic sensor domain BUM88_RS14690 PF00990 Diguanylate cyclase, GGDEF domain BUM88_RS14705 PF00155 Aminotransferase class I and II BUM88_RS14730 PF00106 short chain dehydrogenase BUM88_RS14735 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) BUM88_RS14740 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ BUM88_RS14745 PF02565 Recombination protein O C terminal BUM88_RS14745 PF11967 Recombination protein O N terminal BUM88_RS14755 PF07650 KH domain BUM88_RS14755 PF01926 50S ribosome-binding GTPase BUM88_RS14760 PF00035 Double-stranded RNA binding motif BUM88_RS14760 PF14622 Ribonuclease-III-like BUM88_RS14770 PF10502 Signal peptidase, peptidase S26 BUM88_RS14775 PF00679 Elongation factor G C-terminus BUM88_RS14775 PF06421 GTP-binding protein LepA C-terminus BUM88_RS14775 PF03144 Elongation factor Tu domain 2 BUM88_RS14775 PF00009 Elongation factor Tu GTP binding domain BUM88_RS14780 PF13302 Acetyltransferase (GNAT) domain BUM88_RS14790 PF13180 PDZ domain BUM88_RS14795 PF00890 FAD binding domain BUM88_RS14795 PF02910 Fumarate reductase flavoprotein C-term BUM88_RS14805 PF02223 Thymidylate kinase BUM88_RS14810 PF02618 YceG-like family BUM88_RS14815 PF01063 Amino-transferase class IV BUM88_RS14830 PF00528 Binding-protein-dependent transport system inner membrane component BUM88_RS14835 PF00528 Binding-protein-dependent transport system inner membrane component BUM88_RS14840 PF00005 ABC transporter BUM88_RS14840 PF12857 TOBE-like domain BUM88_RS14845 PF03466 LysR substrate binding domain BUM88_RS14845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS14855 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal BUM88_RS14855 PF14602 Hexapeptide repeat of succinyl-transferase BUM88_RS14855 PF00132 Bacterial transferase hexapeptide (six repeats) BUM88_RS14860 PF04055 Radical SAM superfamily BUM88_RS14865 PF06508 Queuosine biosynthesis protein QueC BUM88_RS14880 PF00578 AhpC/TSA family BUM88_RS14895 PF00293 NUDIX domain BUM88_RS14895 PF01467 Cytidylyltransferase-like BUM88_RS14900 PF00378 Enoyl-CoA hydratase/isomerase BUM88_RS14905 PF01784 NIF3 (NGG1p interacting factor 3) BUM88_RS14910 PF07690 Major Facilitator Superfamily BUM88_RS14915 PF02769 AIR synthase related protein, C-terminal domain BUM88_RS14915 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BUM88_RS14915 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal BUM88_RS14920 PF01966 HD domain BUM88_RS14925 PF07499 RuvA, C-terminal domain BUM88_RS14925 PF01330 RuvA N terminal domain BUM88_RS14930 PF17864 RuvB AAA lid domain BUM88_RS14930 PF05491 RuvB C-terminal winged helix domain BUM88_RS14930 PF05496 Holliday junction DNA helicase RuvB P-loop domain BUM88_RS14935 PF01546 Peptidase family M20/M25/M40 BUM88_RS14935 PF07687 Peptidase dimerisation domain BUM88_RS14940 PF03061 Thioesterase superfamily BUM88_RS14945 PF01618 MotA/TolQ/ExbB proton channel family BUM88_RS14950 PF02472 Biopolymer transport protein ExbD/TolR BUM88_RS14960 PF07676 WD40-like Beta Propeller Repeat BUM88_RS14960 PF04052 TolB amino-terminal domain BUM88_RS14965 PF00691 OmpA family BUM88_RS14975 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain BUM88_RS14980 PF00588 SpoU rRNA Methylase family BUM88_RS14980 PF08032 RNA 2'-O ribose methyltransferase substrate binding BUM88_RS15015 PF00308 Bacterial dnaA protein BUM88_RS15015 PF08299 Bacterial dnaA protein helix-turn-helix BUM88_RS15015 PF11638 DnaA N-terminal domain BUM88_RS15020 PF01594 AI-2E family transporter BUM88_RS15025 PF00586 AIR synthase related protein, N-terminal domain BUM88_RS15025 PF02769 AIR synthase related protein, C-terminal domain BUM88_RS15030 PF00551 Formyl transferase BUM88_RS15040 PF01343 Peptidase family S49 BUM88_RS15040 PF06965 Na+/H+ antiporter 1 BUM88_RS15050 PF00753 Metallo-beta-lactamase superfamily BUM88_RS15050 PF13567 Domain of unknown function (DUF4131) BUM88_RS15050 PF03772 Competence protein BUM88_RS15055 PF00005 ABC transporter BUM88_RS15060 PF02687 FtsX-like permease family BUM88_RS15060 PF12704 MacB-like periplasmic core domain BUM88_RS15065 PF00892 EamA-like transporter family BUM88_RS15070 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BUM88_RS15080 PF00266 Aminotransferase class-V BUM88_RS15090 PF13533 Biotin-lipoyl like BUM88_RS15105 PF03989 DNA gyrase C-terminal domain, beta-propeller BUM88_RS15105 PF00521 DNA gyrase/topoisomerase IV, subunit A BUM88_RS15110 PF16123 Hydroxyacylglutathione hydrolase C-terminus BUM88_RS15110 PF00753 Metallo-beta-lactamase superfamily BUM88_RS15120 PF00766 Electron transfer flavoprotein FAD-binding domain BUM88_RS15120 PF01012 Electron transfer flavoprotein domain BUM88_RS15125 PF01012 Electron transfer flavoprotein domain BUM88_RS15135 PF00589 Phage integrase family BUM88_RS15135 PF02899 Phage integrase, N-terminal SAM-like domain BUM88_RS15140 PF01810 LysE type translocator BUM88_RS15145 PF00561 alpha/beta hydrolase fold BUM88_RS15150 PF01678 Diaminopimelate epimerase BUM88_RS15155 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BUM88_RS15155 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BUM88_RS15165 PF00324 Amino acid permease BUM88_RS15170 PF18073 Rubredoxin metal binding domain BUM88_RS15180 PF00152 tRNA synthetases class II (D, K and N) BUM88_RS15185 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BUM88_RS15185 PF11890 Domain of unknown function (DUF3410) BUM88_RS15185 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BUM88_RS15195 PF02595 Glycerate kinase family BUM88_RS15210 PF00881 Nitroreductase family BUM88_RS15265 PF03180 NLPA lipoprotein BUM88_RS15270 PF13193 AMP-binding enzyme C-terminal domain BUM88_RS15270 PF00501 AMP-binding enzyme BUM88_RS15270 PF00550 Phosphopantetheine attachment site BUM88_RS15270 PF00668 Condensation domain BUM88_RS15270 PF00975 Thioesterase domain BUM88_RS15275 PF03466 LysR substrate binding domain BUM88_RS15275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS15295 PF03449 Transcription elongation factor, N-terminal BUM88_RS15295 PF01272 Transcription elongation factor, GreA/GreB, C-term BUM88_RS15300 PF00497 Bacterial extracellular solute-binding proteins, family 3 BUM88_RS15300 PF01464 Transglycosylase SLT domain BUM88_RS15310 PF01171 PP-loop family BUM88_RS15320 PF01464 Transglycosylase SLT domain BUM88_RS15325 PF01435 Peptidase family M48 BUM88_RS15335 PF00873 AcrB/AcrD/AcrF family BUM88_RS15340 PF03009 Glycerophosphoryl diester phosphodiesterase family BUM88_RS15345 PF00753 Metallo-beta-lactamase superfamily BUM88_RS15350 PF01219 Prokaryotic diacylglycerol kinase BUM88_RS15355 PF00118 TCP-1/cpn60 chaperonin family BUM88_RS15360 PF00166 Chaperonin 10 Kd subunit BUM88_RS15370 PF00149 Calcineurin-like phosphoesterase BUM88_RS15375 PF00781 Diacylglycerol kinase catalytic domain BUM88_RS15380 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain BUM88_RS15380 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain BUM88_RS15385 PF01266 FAD dependent oxidoreductase BUM88_RS15385 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BUM88_RS15390 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BUM88_RS15390 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BUM88_RS15395 PF00083 Sugar (and other) transporter BUM88_RS15410 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BUM88_RS15410 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BUM88_RS15425 PF09423 PhoD-like phosphatase BUM88_RS15425 PF16655 PhoD-like phosphatase, N-terminal domain BUM88_RS15445 PF00809 Pterin binding enzyme BUM88_RS15450 PF01434 Peptidase family M41 BUM88_RS15450 PF00004 ATPase family associated with various cellular activities (AAA) BUM88_RS15450 PF06480 FtsH Extracellular BUM88_RS15450 PF17862 AAA+ lid domain BUM88_RS15455 PF01728 FtsJ-like methyltransferase BUM88_RS15460 PF01985 CRS1 / YhbY (CRM) domain BUM88_RS15480 PF00117 Glutamine amidotransferase class-I BUM88_RS15480 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BUM88_RS15485 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BUM88_RS15485 PF02142 MGS-like domain BUM88_RS15485 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BUM88_RS15490 PF03449 Transcription elongation factor, N-terminal BUM88_RS15490 PF01272 Transcription elongation factor, GreA/GreB, C-term BUM88_RS15495 PF00132 Bacterial transferase hexapeptide (six repeats) BUM88_RS15500 PF00582 Universal stress protein family BUM88_RS15505 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BUM88_RS15515 PF09587 Bacterial capsule synthesis protein PGA_cap BUM88_RS15535 PF00999 Sodium/hydrogen exchanger family BUM88_RS15540 PF04228 Putative neutral zinc metallopeptidase BUM88_RS15545 PF05661 Protein of unknown function (DUF808) BUM88_RS15550 PF00579 tRNA synthetases class I (W and Y) BUM88_RS15555 PF00549 CoA-ligase BUM88_RS15555 PF02629 CoA binding domain BUM88_RS15560 PF08442 ATP-grasp domain BUM88_RS15560 PF00549 CoA-ligase BUM88_RS15565 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BUM88_RS15565 PF07992 Pyridine nucleotide-disulphide oxidoreductase BUM88_RS15570 PF00364 Biotin-requiring enzyme BUM88_RS15570 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BUM88_RS15570 PF02817 e3 binding domain BUM88_RS15575 PF00676 Dehydrogenase E1 component BUM88_RS15575 PF16078 2-oxoglutarate dehydrogenase N-terminus BUM88_RS15575 PF02779 Transketolase, pyrimidine binding domain BUM88_RS15575 PF16870 2-oxoglutarate dehydrogenase C-terminal BUM88_RS15590 PF13085 2Fe-2S iron-sulfur cluster binding domain BUM88_RS15595 PF02910 Fumarate reductase flavoprotein C-term BUM88_RS15595 PF00890 FAD binding domain BUM88_RS15600 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BUM88_RS15605 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BUM88_RS15615 PF00285 Citrate synthase, C-terminal domain BUM88_RS15625 PF00581 Rhodanese-like domain BUM88_RS15625 PF17773 UPF0176 acylphosphatase like domain BUM88_RS15640 PF04546 Sigma-70, non-essential region BUM88_RS15640 PF03979 Sigma-70 factor, region 1.1 BUM88_RS15640 PF00140 Sigma-70 factor, region 1.2 BUM88_RS15640 PF04542 Sigma-70 region 2 BUM88_RS15640 PF04539 Sigma-70 region 3 BUM88_RS15640 PF04545 Sigma-70, region 4 BUM88_RS15645 PF04359 Protein of unknown function (DUF493) BUM88_RS15650 PF03099 Biotin/lipoate A/B protein ligase family BUM88_RS15660 PF00465 Iron-containing alcohol dehydrogenase BUM88_RS15665 PF13520 Amino acid permease BUM88_RS15670 PF03358 NADPH-dependent FMN reductase BUM88_RS15700 PF00588 SpoU rRNA Methylase family BUM88_RS15705 PF10414 Sirohaem synthase dimerisation region BUM88_RS15705 PF14824 Sirohaem biosynthesis protein central BUM88_RS15705 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BUM88_RS15710 PF02403 Seryl-tRNA synthetase N-terminal domain BUM88_RS15710 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BUM88_RS15720 PF03548 Outer membrane lipoprotein carrier protein LolA BUM88_RS15725 PF01016 Ribosomal L27 protein BUM88_RS15730 PF00829 Ribosomal prokaryotic L21 protein BUM88_RS15735 PF00348 Polyprenyl synthetase BUM88_RS15745 PF01569 PAP2 superfamily BUM88_RS15750 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BUM88_RS15750 PF00529 HlyD membrane-fusion protein of T1SS BUM88_RS15755 PF00873 AcrB/AcrD/AcrF family BUM88_RS15760 PF02321 Outer membrane efflux protein BUM88_RS15765 PF01906 Putative heavy-metal-binding BUM88_RS15770 PF01906 Putative heavy-metal-binding BUM88_RS15775 PF07690 Major Facilitator Superfamily BUM88_RS15790 PF08264 Anticodon-binding domain of tRNA BUM88_RS15790 PF00133 tRNA synthetases class I (I, L, M and V) BUM88_RS15790 PF10458 Valyl tRNA synthetase tRNA binding arm BUM88_RS15810 PF03466 LysR substrate binding domain BUM88_RS15810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS15815 PF00909 Ammonium Transporter Family BUM88_RS15825 PF00512 His Kinase A (phospho-acceptor) domain BUM88_RS15825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BUM88_RS15825 PF08521 Two-component sensor kinase N-terminal BUM88_RS15830 PF00486 Transcriptional regulatory protein, C terminal BUM88_RS15830 PF00072 Response regulator receiver domain BUM88_RS15835 PF00884 Sulfatase BUM88_RS15835 PF08019 Phosphoethanolamine transferase EptA/EptB BUM88_RS15860 PF01734 Patatin-like phospholipase BUM88_RS15870 PF01145 SPFH domain / Band 7 family BUM88_RS15875 PF04237 YjbR BUM88_RS15880 PF00348 Polyprenyl synthetase BUM88_RS15885 PF04303 PrpF protein BUM88_RS15890 PF00324 Amino acid permease BUM88_RS15940 PF01965 DJ-1/PfpI family BUM88_RS15945 PF08659 KR domain BUM88_RS15945 PF00698 Acyl transferase domain BUM88_RS15945 PF08240 Alcohol dehydrogenase GroES-like domain BUM88_RS15945 PF08990 Erythronolide synthase docking BUM88_RS15945 PF09277 Erythronolide synthase, docking BUM88_RS15945 PF16197 Ketoacyl-synthetase C-terminal extension BUM88_RS15945 PF00109 Beta-ketoacyl synthase, N-terminal domain BUM88_RS15945 PF02801 Beta-ketoacyl synthase, C-terminal domain BUM88_RS15945 PF00550 Phosphopantetheine attachment site BUM88_RS15945 PF14765 Polyketide synthase dehydratase BUM88_RS15950 PF12833 Helix-turn-helix domain BUM88_RS15950 PF06719 AraC-type transcriptional regulator N-terminus BUM88_RS15955 PF02673 Bacitracin resistance protein BacA BUM88_RS15975 PF02525 Flavodoxin-like fold BUM88_RS15990 PF01507 Phosphoadenosine phosphosulfate reductase family BUM88_RS15995 PF06974 Protein of unknown function (DUF1298) BUM88_RS15995 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain BUM88_RS16005 PF10150 Ribonuclease E/G family BUM88_RS16005 PF00575 S1 RNA binding domain BUM88_RS16010 PF02545 Maf-like protein BUM88_RS16015 PF04093 rod shape-determining protein MreD BUM88_RS16020 PF04085 rod shape-determining protein MreC BUM88_RS16030 PF02686 Glu-tRNAGln amidotransferase C subunit BUM88_RS16035 PF01425 Amidase BUM88_RS16040 PF02934 GatB/GatE catalytic domain BUM88_RS16040 PF02637 GatB domain BUM88_RS16070 PF05992 SbmA/BacA-like family BUM88_RS16075 PF00291 Pyridoxal-phosphate dependent enzyme BUM88_RS16075 PF13291 ACT domain BUM88_RS16080 PF01734 Patatin-like phospholipase BUM88_RS16085 PF01235 Sodium:alanine symporter family BUM88_RS16100 PF00881 Nitroreductase family BUM88_RS16105 PF07690 Major Facilitator Superfamily BUM88_RS16110 PF12805 FUSC-like inner membrane protein yccS BUM88_RS16120 PF00667 FAD binding domain BUM88_RS16120 PF00175 Oxidoreductase NAD-binding domain BUM88_RS16120 PF00258 Flavodoxin BUM88_RS16145 PF17969 L,D-transpeptidase C-terminal domain BUM88_RS16145 PF03734 L,D-transpeptidase catalytic domain BUM88_RS16150 PF04304 Protein of unknown function (DUF454) BUM88_RS16165 PF01546 Peptidase family M20/M25/M40 BUM88_RS16165 PF07687 Peptidase dimerisation domain BUM88_RS16175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BUM88_RS16175 PF01627 Hpt domain BUM88_RS16175 PF00072 Response regulator receiver domain BUM88_RS16175 PF01584 CheW-like domain BUM88_RS16180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BUM88_RS16180 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term BUM88_RS16185 PF01584 CheW-like domain BUM88_RS16190 PF00072 Response regulator receiver domain BUM88_RS16195 PF00072 Response regulator receiver domain BUM88_RS16210 PF00873 AcrB/AcrD/AcrF family BUM88_RS16215 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BUM88_RS16215 PF03129 Anticodon binding domain BUM88_RS16215 PF04073 Aminoacyl-tRNA editing domain BUM88_RS16220 PF07411 Domain of unknown function (DUF1508) BUM88_RS16225 PF08274 PhnA Zinc-Ribbon BUM88_RS16225 PF03831 PhnA domain BUM88_RS16230 PF04343 Protein of unknown function, DUF488 BUM88_RS16235 PF12697 Alpha/beta hydrolase family BUM88_RS16240 PF00881 Nitroreductase family BUM88_RS16245 PF00296 Luciferase-like monooxygenase BUM88_RS16250 PF00857 Isochorismatase family BUM88_RS16255 PF01042 Endoribonuclease L-PSP BUM88_RS16260 PF01613 Flavin reductase like domain BUM88_RS16265 PF00860 Permease family BUM88_RS16270 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BUM88_RS16270 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BUM88_RS16280 PF01571 Aminomethyltransferase folate-binding domain BUM88_RS16285 PF10411 Disulfide bond isomerase protein N-terminus BUM88_RS16285 PF13098 Thioredoxin-like domain BUM88_RS16295 PF03547 Membrane transport protein BUM88_RS16300 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BUM88_RS16305 PF07715 TonB-dependent Receptor Plug Domain BUM88_RS16305 PF00593 TonB dependent receptor BUM88_RS16310 PF02245 Methylpurine-DNA glycosylase (MPG) BUM88_RS16315 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BUM88_RS16315 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BUM88_RS16315 PF06827 Zinc finger found in FPG and IleRS BUM88_RS16330 PF01741 Large-conductance mechanosensitive channel, MscL BUM88_RS16335 PF00009 Elongation factor Tu GTP binding domain BUM88_RS16335 PF03144 Elongation factor Tu domain 2 BUM88_RS16335 PF00679 Elongation factor G C-terminus BUM88_RS16340 PF00860 Permease family BUM88_RS16345 PF05175 Methyltransferase small domain BUM88_RS16345 PF08468 Methyltransferase small domain N-terminal BUM88_RS16350 PF00324 Amino acid permease BUM88_RS16355 PF01139 tRNA-splicing ligase RtcB BUM88_RS16360 PF00691 OmpA family BUM88_RS16360 PF13505 Outer membrane protein beta-barrel domain BUM88_RS16365 PF07963 Prokaryotic N-terminal methylation motif BUM88_RS16365 PF00114 Pilin (bacterial filament) BUM88_RS16370 PF00108 Thiolase, N-terminal domain BUM88_RS16370 PF02803 Thiolase, C-terminal domain BUM88_RS16380 PF00893 Small Multidrug Resistance protein BUM88_RS16390 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BUM88_RS16390 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BUM88_RS16395 PF01011 PQQ enzyme repeat BUM88_RS16400 PF04966 Carbohydrate-selective porin, OprB family BUM88_RS16405 PF02515 CoA-transferase family III BUM88_RS16410 PF02311 AraC-like ligand binding domain BUM88_RS16410 PF12833 Helix-turn-helix domain BUM88_RS16415 PF02803 Thiolase, C-terminal domain BUM88_RS16415 PF00108 Thiolase, N-terminal domain BUM88_RS16420 PF00378 Enoyl-CoA hydratase/isomerase BUM88_RS16420 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BUM88_RS16420 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BUM88_RS16435 PF13673 Acetyltransferase (GNAT) domain BUM88_RS16445 PF03006 Haemolysin-III related BUM88_RS16450 PF00083 Sugar (and other) transporter BUM88_RS16450 PF07690 Major Facilitator Superfamily BUM88_RS16460 PF07516 SecA Wing and Scaffold domain BUM88_RS16460 PF02810 SEC-C motif BUM88_RS16460 PF07517 SecA DEAD-like domain BUM88_RS16460 PF01043 SecA preprotein cross-linking domain BUM88_RS16465 PF00578 AhpC/TSA family BUM88_RS16465 PF10417 C-terminal domain of 1-Cys peroxiredoxin BUM88_RS16470 PF00753 Metallo-beta-lactamase superfamily BUM88_RS16490 PF02875 Mur ligase family, glutamate ligase domain BUM88_RS16490 PF08245 Mur ligase middle domain BUM88_RS16495 PF01039 Carboxyl transferase domain BUM88_RS16500 PF00290 Tryptophan synthase alpha chain BUM88_RS16525 PF00291 Pyridoxal-phosphate dependent enzyme BUM88_RS16530 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BUM88_RS16535 PF07715 TonB-dependent Receptor Plug Domain BUM88_RS16535 PF00593 TonB dependent receptor BUM88_RS16540 PF01923 Cobalamin adenosyltransferase BUM88_RS16560 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BUM88_RS16570 PF00072 Response regulator receiver domain BUM88_RS16570 PF00486 Transcriptional regulatory protein, C terminal BUM88_RS16575 PF00672 HAMP domain BUM88_RS16575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BUM88_RS16575 PF00512 His Kinase A (phospho-acceptor) domain BUM88_RS16585 PF02770 Acyl-CoA dehydrogenase, middle domain BUM88_RS16585 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BUM88_RS16585 PF12806 Acetyl-CoA dehydrogenase C-terminal like BUM88_RS16585 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BUM88_RS16590 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BUM88_RS16590 PF02770 Acyl-CoA dehydrogenase, middle domain BUM88_RS16590 PF12806 Acetyl-CoA dehydrogenase C-terminal like BUM88_RS16590 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BUM88_RS16595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS16595 PF03466 LysR substrate binding domain BUM88_RS16600 PF00043 Glutathione S-transferase, C-terminal domain BUM88_RS16600 PF02798 Glutathione S-transferase, N-terminal domain BUM88_RS16605 PF06146 Phosphate-starvation-inducible E BUM88_RS16625 PF00593 TonB dependent receptor BUM88_RS16625 PF07715 TonB-dependent Receptor Plug Domain BUM88_RS16635 PF01336 OB-fold nucleic acid binding domain BUM88_RS16635 PF02938 GAD domain BUM88_RS16635 PF00152 tRNA synthetases class II (D, K and N) BUM88_RS16640 PF11380 Stealth protein CR2, conserved region 2 BUM88_RS16640 PF17101 Stealth protein CR1, conserved region 1 BUM88_RS16640 PF17103 Stealth protein CR4, conserved region 4 BUM88_RS16665 PF13439 Glycosyltransferase Family 4 BUM88_RS16665 PF00534 Glycosyl transferases group 1 BUM88_RS16670 PF00535 Glycosyl transferase family 2 BUM88_RS16675 PF01522 Polysaccharide deacetylase BUM88_RS16690 PF01063 Amino-transferase class IV BUM88_RS16695 PF03710 Glutamate-ammonia ligase adenylyltransferase BUM88_RS16695 PF08335 GlnD PII-uridylyltransferase BUM88_RS16700 PF00072 Response regulator receiver domain BUM88_RS16700 PF01627 Hpt domain BUM88_RS16700 PF00512 His Kinase A (phospho-acceptor) domain BUM88_RS16700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BUM88_RS16700 PF00672 HAMP domain BUM88_RS16700 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BUM88_RS16710 PF00005 ABC transporter BUM88_RS16710 PF00664 ABC transporter transmembrane region BUM88_RS16725 PF00589 Phage integrase family BUM88_RS16725 PF13356 Arm DNA-binding domain BUM88_RS16735 PF02547 Queuosine biosynthesis protein BUM88_RS16750 PF01702 Queuine tRNA-ribosyltransferase BUM88_RS16755 PF02699 Preprotein translocase subunit BUM88_RS16760 PF07549 SecD/SecF GG Motif BUM88_RS16760 PF13721 SecD export protein N-terminal TM region BUM88_RS16760 PF02355 Protein export membrane protein BUM88_RS16765 PF07549 SecD/SecF GG Motif BUM88_RS16765 PF02355 Protein export membrane protein BUM88_RS16770 PF04127 DNA / pantothenate metabolism flavoprotein BUM88_RS16770 PF02441 Flavoprotein BUM88_RS16775 PF04002 RadC-like JAB domain BUM88_RS16780 PF01062 Bestrophin, RFP-TM, chloride channel BUM88_RS16785 PF02811 PHP domain BUM88_RS16790 PF04279 Intracellular septation protein A BUM88_RS16795 PF03795 YCII-related domain BUM88_RS16805 PF05430 S-adenosyl-L-methionine-dependent methyltransferase BUM88_RS16805 PF01266 FAD dependent oxidoreductase BUM88_RS16815 PF04461 Protein of unknown function (DUF520) BUM88_RS16825 PF03061 Thioesterase superfamily BUM88_RS16830 PF00085 Thioredoxin BUM88_RS16840 PF04273 Putative phosphatase (DUF442) BUM88_RS16840 PF00753 Metallo-beta-lactamase superfamily BUM88_RS16850 PF07992 Pyridine nucleotide-disulphide oxidoreductase BUM88_RS16850 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BUM88_RS16890 PF13689 YfiR/HmsC-like BUM88_RS16895 PF17152 Periplasmic sensor domain BUM88_RS16895 PF00990 Diguanylate cyclase, GGDEF domain BUM88_RS16900 PF00223 Photosystem I psaA/psaB protein BUM88_RS16900 PF00691 OmpA family BUM88_RS16905 PF00149 Calcineurin-like phosphoesterase BUM88_RS16905 PF10518 TAT (twin-arginine translocation) pathway signal sequence BUM88_RS16910 PF13091 PLD-like domain BUM88_RS16920 PF13167 GTP-binding GTPase N-terminal BUM88_RS16920 PF16360 GTP-binding GTPase Middle Region BUM88_RS16920 PF01926 50S ribosome-binding GTPase BUM88_RS16940 PF00149 Calcineurin-like phosphoesterase BUM88_RS16945 PF00398 Ribosomal RNA adenine dimethylase BUM88_RS16950 PF04166 Pyridoxal phosphate biosynthetic protein PdxA BUM88_RS16955 PF00572 Ribosomal protein L13 BUM88_RS16960 PF00380 Ribosomal protein S9/S16 BUM88_RS16965 PF13417 Glutathione S-transferase, N-terminal domain BUM88_RS16965 PF00043 Glutathione S-transferase, C-terminal domain BUM88_RS16970 PF04386 Stringent starvation protein B BUM88_RS16980 PF00364 Biotin-requiring enzyme BUM88_RS16980 PF00289 Biotin carboxylase, N-terminal domain BUM88_RS16980 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BUM88_RS16980 PF02785 Biotin carboxylase C-terminal domain BUM88_RS16990 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BUM88_RS16990 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BUM88_RS16990 PF02770 Acyl-CoA dehydrogenase, middle domain BUM88_RS16995 PF01039 Carboxyl transferase domain BUM88_RS17010 PF00440 Bacterial regulatory proteins, tetR family BUM88_RS17010 PF17932 Tetracyclin repressor-like, C-terminal domain BUM88_RS17015 PF13302 Acetyltransferase (GNAT) domain BUM88_RS17020 PF02770 Acyl-CoA dehydrogenase, middle domain BUM88_RS17020 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BUM88_RS17020 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BUM88_RS17070 PF01066 CDP-alcohol phosphatidyltransferase BUM88_RS17075 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ BUM88_RS17095 PF00056 lactate/malate dehydrogenase, NAD binding domain BUM88_RS17095 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BUM88_RS17105 PF01464 Transglycosylase SLT domain BUM88_RS17105 PF10145 Phage-related minor tail protein BUM88_RS17105 PF01551 Peptidase family M23 BUM88_RS17110 PF04055 Radical SAM superfamily BUM88_RS17110 PF01938 TRAM domain BUM88_RS17110 PF00919 Uncharacterized protein family UPF0004 BUM88_RS17115 PF02562 PhoH-like protein BUM88_RS17120 PF02130 Uncharacterized protein family UPF0054 BUM88_RS17145 PF03358 NADPH-dependent FMN reductase BUM88_RS17150 PF03631 Virulence factor BrkB BUM88_RS17155 PF01557 Fumarylacetoacetate (FAA) hydrolase family BUM88_RS17195 PF08461 Ribonuclease R winged-helix domain BUM88_RS17195 PF08206 Ribonuclease B OB domain BUM88_RS17195 PF00773 RNB domain BUM88_RS17195 PF00575 S1 RNA binding domain BUM88_RS17195 PF17876 Cold shock domain BUM88_RS17200 PF01432 Peptidase family M3 BUM88_RS17205 PF09526 Probable metal-binding protein (DUF2387) BUM88_RS17235 PF03937 Flavinator of succinate dehydrogenase BUM88_RS17240 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BUM88_RS17240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BUM88_RS17240 PF02770 Acyl-CoA dehydrogenase, middle domain BUM88_RS17245 PF00743 Flavin-binding monooxygenase-like BUM88_RS17250 PF01196 Ribosomal protein L17 BUM88_RS17255 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BUM88_RS17255 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BUM88_RS17255 PF01000 RNA polymerase Rpb3/RpoA insert domain BUM88_RS17260 PF01479 S4 domain BUM88_RS17260 PF00163 Ribosomal protein S4/S9 N-terminal domain BUM88_RS17265 PF00411 Ribosomal protein S11 BUM88_RS17270 PF00416 Ribosomal protein S13/S18 BUM88_RS17275 PF00444 Ribosomal protein L36 BUM88_RS17280 PF00344 SecY translocase BUM88_RS17285 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BUM88_RS17290 PF00327 Ribosomal protein L30p/L7e BUM88_RS17295 PF03719 Ribosomal protein S5, C-terminal domain BUM88_RS17295 PF00333 Ribosomal protein S5, N-terminal domain BUM88_RS17300 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BUM88_RS17305 PF00347 Ribosomal protein L6 BUM88_RS17310 PF00410 Ribosomal protein S8 BUM88_RS17315 PF00253 Ribosomal protein S14p/S29e BUM88_RS17320 PF00281 Ribosomal protein L5 BUM88_RS17320 PF00673 ribosomal L5P family C-terminus BUM88_RS17325 PF00467 KOW motif BUM88_RS17325 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BUM88_RS17330 PF00238 Ribosomal protein L14p/L23e BUM88_RS17335 PF00366 Ribosomal protein S17 BUM88_RS17340 PF00831 Ribosomal L29 protein BUM88_RS17345 PF00252 Ribosomal protein L16p/L10e BUM88_RS17350 PF00189 Ribosomal protein S3, C-terminal domain BUM88_RS17350 PF07650 KH domain BUM88_RS17355 PF00237 Ribosomal protein L22p/L17e BUM88_RS17360 PF00203 Ribosomal protein S19 BUM88_RS17365 PF03947 Ribosomal Proteins L2, C-terminal domain BUM88_RS17365 PF00181 Ribosomal Proteins L2, RNA binding domain BUM88_RS17370 PF00276 Ribosomal protein L23 BUM88_RS17375 PF00573 Ribosomal protein L4/L1 family BUM88_RS17380 PF00297 Ribosomal protein L3 BUM88_RS17385 PF00338 Ribosomal protein S10p/S20e BUM88_RS17390 PF00117 Glutamine amidotransferase class-I BUM88_RS17395 PF01053 Cys/Met metabolism PLP-dependent enzyme BUM88_RS17400 PF05872 Bacterial protein of unknown function (DUF853) BUM88_RS17405 PF00970 Oxidoreductase FAD-binding domain BUM88_RS17405 PF00042 Globin BUM88_RS17405 PF00175 Oxidoreductase NAD-binding domain BUM88_RS17410 PF02082 Transcriptional regulator BUM88_RS17415 PF01926 50S ribosome-binding GTPase BUM88_RS17425 PF00375 Sodium:dicarboxylate symporter family BUM88_RS17435 PF01553 Acyltransferase BUM88_RS17450 PF17191 RecG wedge domain BUM88_RS17450 PF00271 Helicase conserved C-terminal domain BUM88_RS17450 PF00270 DEAD/DEAH box helicase BUM88_RS17455 PF00156 Phosphoribosyl transferase domain BUM88_RS17460 PF00293 NUDIX domain BUM88_RS17465 PF03641 Possible lysine decarboxylase BUM88_RS17470 PF01544 CorA-like Mg2+ transporter protein BUM88_RS17490 PF02405 Permease MlaE BUM88_RS17495 PF00005 ABC transporter BUM88_RS17505 PF00271 Helicase conserved C-terminal domain BUM88_RS17505 PF00270 DEAD/DEAH box helicase BUM88_RS17510 PF00459 Inositol monophosphatase family BUM88_RS17515 PF02780 Transketolase, C-terminal domain BUM88_RS17515 PF02779 Transketolase, pyrimidine binding domain BUM88_RS17515 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BUM88_RS17520 PF00925 GTP cyclohydrolase II BUM88_RS17525 PF01218 Coproporphyrinogen III oxidase BUM88_RS17530 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BUM88_RS17530 PF01488 Shikimate / quinate 5-dehydrogenase BUM88_RS17530 PF08501 Shikimate dehydrogenase substrate binding domain BUM88_RS17540 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BUM88_RS17540 PF02770 Acyl-CoA dehydrogenase, middle domain BUM88_RS17540 PF12806 Acetyl-CoA dehydrogenase C-terminal like BUM88_RS17540 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BUM88_RS17550 PF04024 PspC domain BUM88_RS17555 PF00571 CBS domain BUM88_RS17585 PF02091 Glycyl-tRNA synthetase alpha subunit BUM88_RS17590 PF02092 Glycyl-tRNA synthetase beta subunit BUM88_RS17590 PF05746 DALR anticodon binding domain BUM88_RS17600 PF00892 EamA-like transporter family BUM88_RS17605 PF03466 LysR substrate binding domain BUM88_RS17605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS17610 PF01177 Asp/Glu/Hydantoin racemase BUM88_RS17615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS17615 PF03466 LysR substrate binding domain BUM88_RS17630 PF00082 Subtilase family BUM88_RS17630 PF05922 Peptidase inhibitor I9 BUM88_RS17645 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family BUM88_RS17650 PF04996 Succinylarginine dihydrolase BUM88_RS17655 PF00171 Aldehyde dehydrogenase family BUM88_RS17660 PF04958 Arginine N-succinyltransferase beta subunit BUM88_RS17665 PF00202 Aminotransferase class-III BUM88_RS17670 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BUM88_RS17670 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BUM88_RS17675 PF00324 Amino acid permease BUM88_RS17685 PF08241 Methyltransferase domain BUM88_RS17705 PF13614 AAA domain BUM88_RS17710 PF01594 AI-2E family transporter BUM88_RS17715 PF00080 Copper/zinc superoxide dismutase (SODC) BUM88_RS17720 PF12805 FUSC-like inner membrane protein yccS BUM88_RS17730 PF07690 Major Facilitator Superfamily BUM88_RS17740 PF02525 Flavodoxin-like fold BUM88_RS17745 PF03992 Antibiotic biosynthesis monooxygenase BUM88_RS17760 PF02913 FAD linked oxidases, C-terminal domain BUM88_RS17760 PF01565 FAD binding domain BUM88_RS17765 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BUM88_RS17765 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BUM88_RS17770 PF00892 EamA-like transporter family BUM88_RS17775 PF00892 EamA-like transporter family BUM88_RS17785 PF01925 Sulfite exporter TauE/SafE BUM88_RS17790 PF16198 tRNA pseudouridylate synthase B C-terminal domain BUM88_RS17790 PF01509 TruB family pseudouridylate synthase (N terminal domain) BUM88_RS17790 PF09157 Pseudouridine synthase II TruB, C-terminal BUM88_RS17795 PF03280 Proteobacterial lipase chaperone protein BUM88_RS17800 PF00561 alpha/beta hydrolase fold BUM88_RS17805 PF01245 Ribosomal protein L19 BUM88_RS17810 PF01746 tRNA (Guanine-1)-methyltransferase BUM88_RS17815 PF05239 PRC-barrel domain BUM88_RS17815 PF01782 RimM N-terminal domain BUM88_RS17820 PF00886 Ribosomal protein S16 BUM88_RS17830 PF00114 Pilin (bacterial filament) BUM88_RS17830 PF07963 Prokaryotic N-terminal methylation motif BUM88_RS17855 PF00114 Pilin (bacterial filament) BUM88_RS17855 PF07963 Prokaryotic N-terminal methylation motif BUM88_RS17860 PF02401 LytB protein BUM88_RS17865 PF00625 Guanylate kinase BUM88_RS17870 PF01192 RNA polymerase Rpb6 BUM88_RS17875 PF13291 ACT domain BUM88_RS17875 PF02824 TGS domain BUM88_RS17875 PF04607 Region found in RelA / SpoT proteins BUM88_RS17880 PF01042 Endoribonuclease L-PSP BUM88_RS17885 PF04324 BFD-like [2Fe-2S] binding domain BUM88_RS17890 PF00210 Ferritin-like domain BUM88_RS17895 PF15864 Protein glycosylation ligase BUM88_RS17895 PF04932 O-Antigen ligase BUM88_RS17895 PF11846 Virulence factor membrane-bound polymerase, C-terminal BUM88_RS17900 PF00114 Pilin (bacterial filament) BUM88_RS17900 PF07963 Prokaryotic N-terminal methylation motif BUM88_RS17910 PF04536 TPM domain BUM88_RS17915 PF04011 LemA family BUM88_RS17925 PF07992 Pyridine nucleotide-disulphide oxidoreductase BUM88_RS17925 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BUM88_RS17930 PF04898 Glutamate synthase central domain BUM88_RS17930 PF01493 GXGXG motif BUM88_RS17930 PF00310 Glutamine amidotransferases class-II BUM88_RS17930 PF01645 Conserved region in glutamate synthase BUM88_RS17940 PF01761 3-dehydroquinate synthase BUM88_RS17945 PF01202 Shikimate kinase BUM88_RS17950 PF11741 AMIN domain BUM88_RS17950 PF00263 Bacterial type II and III secretion system protein BUM88_RS17950 PF03958 Bacterial type II/III secretion system short domain BUM88_RS17950 PF07660 Secretin and TonB N terminus short domain BUM88_RS17960 PF04350 Pilus assembly protein, PilO BUM88_RS17965 PF05137 Fimbrial assembly protein (PilN) BUM88_RS17970 PF11104 Type IV pilus assembly protein PilM; BUM88_RS17975 PF17092 Penicillin-binding protein OB-like domain BUM88_RS17975 PF00905 Penicillin binding protein transpeptidase domain BUM88_RS17975 PF00912 Transglycosylase BUM88_RS17980 PF13847 Methyltransferase domain BUM88_RS17990 PF00953 Glycosyl transferase family 4 BUM88_RS17995 PF08245 Mur ligase middle domain BUM88_RS17995 PF02875 Mur ligase family, glutamate ligase domain BUM88_RS17995 PF01225 Mur ligase family, catalytic domain BUM88_RS18000 PF01225 Mur ligase family, catalytic domain BUM88_RS18000 PF02875 Mur ligase family, glutamate ligase domain BUM88_RS18000 PF08245 Mur ligase middle domain BUM88_RS18005 PF00905 Penicillin binding protein transpeptidase domain BUM88_RS18005 PF03717 Penicillin-binding Protein dimerisation domain BUM88_RS18015 PF01795 MraW methylase family BUM88_RS18030 PF00749 tRNA synthetases class I (E and Q), catalytic domain BUM88_RS18045 PF00324 Amino acid permease BUM88_RS18070 PF01545 Cation efflux family BUM88_RS18075 PF00873 AcrB/AcrD/AcrF family BUM88_RS18080 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BUM88_RS18080 PF00529 HlyD membrane-fusion protein of T1SS BUM88_RS18100 PF00005 ABC transporter BUM88_RS18100 PF12848 ABC transporter BUM88_RS18105 PF01053 Cys/Met metabolism PLP-dependent enzyme BUM88_RS18110 PF00106 short chain dehydrogenase BUM88_RS18115 PF00916 Sulfate permease family BUM88_RS18115 PF01740 STAS domain BUM88_RS18125 PF17674 HHH domain BUM88_RS18125 PF16921 Tex protein YqgF-like domain BUM88_RS18125 PF00575 S1 RNA binding domain BUM88_RS18125 PF09371 Tex-like protein N-terminal domain BUM88_RS18130 PF00072 Response regulator receiver domain BUM88_RS18130 PF00486 Transcriptional regulatory protein, C terminal BUM88_RS18135 PF00512 His Kinase A (phospho-acceptor) domain BUM88_RS18135 PF00672 HAMP domain BUM88_RS18135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BUM88_RS18145 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain BUM88_RS18145 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain BUM88_RS18150 PF00583 Acetyltransferase (GNAT) family BUM88_RS18170 PF00475 Imidazoleglycerol-phosphate dehydratase BUM88_RS18175 PF00117 Glutamine amidotransferase class-I BUM88_RS18190 PF00977 Histidine biosynthesis protein BUM88_RS18205 PF03992 Antibiotic biosynthesis monooxygenase BUM88_RS18220 PF01636 Phosphotransferase enzyme family BUM88_RS18225 PF00977 Histidine biosynthesis protein BUM88_RS18240 PF00230 Major intrinsic protein BUM88_RS18270 PF02705 K+ potassium transporter BUM88_RS18280 PF00589 Phage integrase family BUM88_RS18280 PF13356 Arm DNA-binding domain BUM88_RS18335 PF12833 Helix-turn-helix domain BUM88_RS18370 PF02525 Flavodoxin-like fold BUM88_RS18375 PF01638 HxlR-like helix-turn-helix BUM88_RS18410 PF02311 AraC-like ligand binding domain BUM88_RS18410 PF12833 Helix-turn-helix domain BUM88_RS18415 PF00248 Aldo/keto reductase family BUM88_RS18435 PF02655 ATP-grasp domain BUM88_RS18435 PF00206 Lyase BUM88_RS18455 PF03466 LysR substrate binding domain BUM88_RS18455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS18460 PF07690 Major Facilitator Superfamily BUM88_RS18490 PF01593 Flavin containing amine oxidoreductase BUM88_RS18500 PF05726 Pirin C-terminal cupin domain BUM88_RS18500 PF02678 Pirin BUM88_RS18505 PF00857 Isochorismatase family BUM88_RS18510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS18515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS18515 PF03466 LysR substrate binding domain BUM88_RS18520 PF00857 Isochorismatase family BUM88_RS18525 PF00171 Aldehyde dehydrogenase family BUM88_RS18530 PF00202 Aminotransferase class-III BUM88_RS18535 PF00155 Aminotransferase class I and II BUM88_RS18535 PF00392 Bacterial regulatory proteins, gntR family BUM88_RS18540 PF00324 Amino acid permease BUM88_RS18550 PF03591 AzlC protein BUM88_RS18560 PF00664 ABC transporter transmembrane region BUM88_RS18560 PF00005 ABC transporter BUM88_RS18600 PF00436 Single-strand binding protein family BUM88_RS18605 PF07690 Major Facilitator Superfamily BUM88_RS18615 PF08543 Phosphomethylpyrimidine kinase BUM88_RS18615 PF02581 Thiamine monophosphate synthase BUM88_RS18615 PF03070 TENA/THI-4/PQQC family BUM88_RS18620 PF00376 MerR family regulatory protein BUM88_RS18620 PF09278 MerR, DNA binding BUM88_RS18625 PF00106 short chain dehydrogenase BUM88_RS18630 PF06942 GlpM protein BUM88_RS18640 PF08240 Alcohol dehydrogenase GroES-like domain BUM88_RS18640 PF00107 Zinc-binding dehydrogenase BUM88_RS18645 PF00440 Bacterial regulatory proteins, tetR family BUM88_RS18645 PF16925 Tetracyclin repressor-like, C-terminal domain BUM88_RS18650 PF00005 ABC transporter BUM88_RS18650 PF17760 UvrA interaction domain BUM88_RS18650 PF17755 UvrA DNA-binding domain BUM88_RS18655 PF00990 Diguanylate cyclase, GGDEF domain BUM88_RS18665 PF02028 BCCT, betaine/carnitine/choline family transporter BUM88_RS18675 PF00474 Sodium:solute symporter family BUM88_RS18680 PF04341 Protein of unknown function, DUF485 BUM88_RS18685 PF00672 HAMP domain BUM88_RS18685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BUM88_RS18685 PF00072 Response regulator receiver domain BUM88_RS18685 PF01627 Hpt domain BUM88_RS18685 PF00512 His Kinase A (phospho-acceptor) domain BUM88_RS18695 PF00072 Response regulator receiver domain BUM88_RS18695 PF00196 Bacterial regulatory proteins, luxR family BUM88_RS18700 PF03358 NADPH-dependent FMN reductase BUM88_RS18705 PF00296 Luciferase-like monooxygenase BUM88_RS18710 PF01037 Lrp/AsnC ligand binding domain BUM88_RS18715 PF00857 Isochorismatase family BUM88_RS18720 PF16177 Acetyl-coenzyme A synthetase N-terminus BUM88_RS18720 PF13193 AMP-binding enzyme C-terminal domain BUM88_RS18720 PF00501 AMP-binding enzyme BUM88_RS18730 PF00924 Mechanosensitive ion channel BUM88_RS18730 PF05552 Conserved TM helix BUM88_RS18735 PF04452 RNA methyltransferase BUM88_RS18740 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) BUM88_RS18745 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BUM88_RS18755 PF03462 PCRF domain BUM88_RS18755 PF00472 RF-1 domain BUM88_RS18770 PF02272 DHHA1 domain BUM88_RS18770 PF01368 DHH family BUM88_RS18770 PF17768 RecJ OB domain BUM88_RS18775 PF01243 Pyridoxamine 5'-phosphate oxidase BUM88_RS18775 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region BUM88_RS18780 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BUM88_RS18780 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BUM88_RS18780 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BUM88_RS18780 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BUM88_RS18785 PF00478 IMP dehydrogenase / GMP reductase domain BUM88_RS18785 PF00571 CBS domain BUM88_RS18790 PF00258 Flavodoxin BUM88_RS18790 PF01613 Flavin reductase like domain BUM88_RS18795 PF00593 TonB dependent receptor BUM88_RS18795 PF07715 TonB-dependent Receptor Plug Domain BUM88_RS18800 PF01169 Uncharacterized protein family UPF0016 BUM88_RS18810 PF02817 e3 binding domain BUM88_RS18810 PF00364 Biotin-requiring enzyme BUM88_RS18810 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BUM88_RS18815 PF00456 Transketolase, thiamine diphosphate binding domain BUM88_RS18815 PF17831 Pyruvate dehydrogenase E1 component middle domain BUM88_RS18820 PF01551 Peptidase family M23 BUM88_RS18830 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase BUM88_RS18835 PF00091 Tubulin/FtsZ family, GTPase domain BUM88_RS18835 PF12327 FtsZ family, C-terminal domain BUM88_RS18840 PF02491 SHS2 domain inserted in FTSA BUM88_RS18845 PF08478 POTRA domain, FtsQ-type BUM88_RS18845 PF03799 Cell division protein FtsQ BUM88_RS18850 PF01820 D-ala D-ala ligase N-terminus BUM88_RS18850 PF07478 D-ala D-ala ligase C-terminus BUM88_RS18855 PF08245 Mur ligase middle domain BUM88_RS18855 PF01225 Mur ligase family, catalytic domain BUM88_RS18855 PF02875 Mur ligase family, glutamate ligase domain BUM88_RS18860 PF04101 Glycosyltransferase family 28 C-terminal domain BUM88_RS18860 PF03033 Glycosyltransferase family 28 N-terminal domain BUM88_RS18865 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain BUM88_RS18865 PF02951 Prokaryotic glutathione synthetase, N-terminal domain BUM88_RS18875 PF07715 TonB-dependent Receptor Plug Domain BUM88_RS18875 PF00593 TonB dependent receptor BUM88_RS18880 PF13673 Acetyltransferase (GNAT) domain BUM88_RS18885 PF00156 Phosphoribosyl transferase domain BUM88_RS18890 PF03372 Endonuclease/Exonuclease/phosphatase family BUM88_RS18895 PF03960 ArsC family BUM88_RS18905 PF07859 alpha/beta hydrolase fold BUM88_RS18910 PF00990 Diguanylate cyclase, GGDEF domain BUM88_RS18910 PF07694 5TMR of 5TMR-LYT BUM88_RS18915 PF11412 Disulphide bond corrector protein DsbC BUM88_RS18915 PF02683 Cytochrome C biogenesis protein transmembrane region BUM88_RS18945 PF00576 HIUase/Transthyretin family BUM88_RS18950 PF00860 Permease family BUM88_RS18960 PF01494 FAD binding domain BUM88_RS18965 PF03561 Allantoicase repeat BUM88_RS18970 PF04115 Ureidoglycolate lyase BUM88_RS18975 PF00204 DNA gyrase B BUM88_RS18975 PF00986 DNA gyrase B subunit, carboxyl terminus BUM88_RS18975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BUM88_RS18975 PF01751 Toprim domain BUM88_RS18980 PF05728 Uncharacterised protein family (UPF0227) BUM88_RS19005 PF04717 Type VI secretion system, phage-baseplate injector BUM88_RS19005 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) BUM88_RS19005 PF13296 Putative type VI secretion system Rhs element Vgr BUM88_RS19010 PF02600 Disulfide bond formation protein DsbB BUM88_RS19015 PF04262 Glutamate-cysteine ligase BUM88_RS19030 PF04286 Protein of unknown function (DUF445) BUM88_RS19035 PF00155 Aminotransferase class I and II BUM88_RS19040 PF01554 MatE BUM88_RS19045 PF00106 short chain dehydrogenase BUM88_RS19055 PF00486 Transcriptional regulatory protein, C terminal BUM88_RS19055 PF00072 Response regulator receiver domain BUM88_RS19060 PF11808 Phosphate regulon sensor protein PhoR BUM88_RS19060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BUM88_RS19060 PF00512 His Kinase A (phospho-acceptor) domain BUM88_RS19060 PF00989 PAS fold BUM88_RS19075 PF12727 PBP superfamily domain BUM88_RS19075 PF12728 Helix-turn-helix domain BUM88_RS19085 PF03069 Acetamidase/Formamidase family BUM88_RS19090 PF02666 Phosphatidylserine decarboxylase BUM88_RS19095 PF00581 Rhodanese-like domain BUM88_RS19100 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BUM88_RS19100 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BUM88_RS19105 PF02580 D-Tyr-tRNA(Tyr) deacylase BUM88_RS19135 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BUM88_RS19135 PF00925 GTP cyclohydrolase II BUM88_RS19140 PF00885 6,7-dimethyl-8-ribityllumazine synthase BUM88_RS19145 PF01029 NusB family BUM88_RS19150 PF00586 AIR synthase related protein, N-terminal domain BUM88_RS19150 PF02769 AIR synthase related protein, C-terminal domain BUM88_RS19155 PF04608 Phosphatidylglycerophosphatase A BUM88_RS19160 PF00132 Bacterial transferase hexapeptide (six repeats) BUM88_RS19160 PF14602 Hexapeptide repeat of succinyl-transferase BUM88_RS19160 PF12804 MobA-like NTP transferase domain BUM88_RS19165 PF01380 SIS domain BUM88_RS19180 PF01177 Asp/Glu/Hydantoin racemase BUM88_RS19190 PF00491 Arginase family BUM88_RS19195 PF01979 Amidohydrolase family BUM88_RS19200 PF00324 Amino acid permease BUM88_RS19205 PF00221 Aromatic amino acid lyase BUM88_RS19210 PF01175 Urocanase Rossmann-like domain BUM88_RS19210 PF17392 Urocanase C-terminal domain BUM88_RS19210 PF17391 Urocanase N-terminal domain BUM88_RS19215 PF05962 HutD BUM88_RS19220 PF00392 Bacterial regulatory proteins, gntR family BUM88_RS19220 PF07702 UTRA domain BUM88_RS19230 PF02492 CobW/HypB/UreG, nucleotide-binding domain BUM88_RS19230 PF07683 Cobalamin synthesis protein cobW C-terminal domain BUM88_RS19240 PF00324 Amino acid permease BUM88_RS19250 PF02798 Glutathione S-transferase, N-terminal domain BUM88_RS19250 PF14497 Glutathione S-transferase, C-terminal domain BUM88_RS19255 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BUM88_RS19265 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BUM88_RS19270 PF04463 Protein of unknown function (DUF523) BUM88_RS19275 PF01554 MatE BUM88_RS19280 PF01758 Sodium Bile acid symporter family BUM88_RS19285 PF00857 Isochorismatase family BUM88_RS19290 PF00701 Dihydrodipicolinate synthetase family BUM88_RS19300 PF01259 SAICAR synthetase BUM88_RS19310 PF01226 Formate/nitrite transporter BUM88_RS19315 PF16193 AAA C-terminal domain BUM88_RS19315 PF00004 ATPase family associated with various cellular activities (AAA) BUM88_RS19315 PF12002 MgsA AAA+ ATPase C terminal BUM88_RS19320 PF07995 Glucose / Sorbosone dehydrogenase BUM88_RS19325 PF03692 Putative zinc- or iron-chelating domain BUM88_RS19330 PF07043 Protein of unknown function (DUF1328) BUM88_RS19345 PF10576 Iron-sulfur binding domain of endonuclease III BUM88_RS19345 PF00633 Helix-hairpin-helix motif BUM88_RS19345 PF00730 HhH-GPD superfamily base excision DNA repair protein BUM88_RS19345 PF14815 NUDIX domain BUM88_RS19360 PF03352 Methyladenine glycosylase BUM88_RS19365 PF00107 Zinc-binding dehydrogenase BUM88_RS19365 PF08240 Alcohol dehydrogenase GroES-like domain BUM88_RS19370 PF00392 Bacterial regulatory proteins, gntR family BUM88_RS19370 PF00155 Aminotransferase class I and II BUM88_RS19385 PF03466 LysR substrate binding domain BUM88_RS19385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUM88_RS19390 PF00248 Aldo/keto reductase family BUM88_RS19395 PF07690 Major Facilitator Superfamily BUM88_RS19405 PF05173 Dihydrodipicolinate reductase, C-terminus BUM88_RS19405 PF01113 Dihydrodipicolinate reductase, N-terminus BUM88_RS19415 PF00226 DnaJ domain BUM88_RS19415 PF00684 DnaJ central domain BUM88_RS19415 PF01556 DnaJ C terminal domain BUM88_RS19425 PF00873 AcrB/AcrD/AcrF family BUM88_RS19430 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BUM88_RS19435 PF08361 MAATS-type transcriptional repressor, C-terminal region BUM88_RS19435 PF00440 Bacterial regulatory proteins, tetR family BUM88_RS19440 PF00311 Phosphoenolpyruvate carboxylase BUM88_RS19445 PF00860 Permease family BUM88_RS19465 PF00920 Dehydratase family BUM88_RS19470 PF00551 Formyl transferase BUM88_RS19470 PF02911 Formyl transferase, C-terminal domain BUM88_RS19475 PF01189 16S rRNA methyltransferase RsmB/F BUM88_RS19475 PF01029 NusB family BUM88_RS19485 PF00209 Sodium:neurotransmitter symporter family BUM88_RS19535 PF00579 tRNA synthetases class I (W and Y) BUM88_RS19540 PF03702 Anhydro-N-acetylmuramic acid kinase BUM88_RS19545 PF00561 alpha/beta hydrolase fold BUM88_RS19550 PF01521 Iron-sulphur cluster biosynthesis BUM88_RS19575 PF00005 ABC transporter BUM88_RS19575 PF12848 ABC transporter BUM88_RS19590 PF00986 DNA gyrase B subunit, carboxyl terminus BUM88_RS19590 PF18053 DNA gyrase B subunit insert domain BUM88_RS19590 PF00204 DNA gyrase B BUM88_RS19590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BUM88_RS19590 PF01751 Toprim domain BUM88_RS19595 PF02463 RecF/RecN/SMC N terminal domain BUM88_RS19600 PF02768 DNA polymerase III beta subunit, C-terminal domain BUM88_RS19600 PF02767 DNA polymerase III beta subunit, central domain BUM88_RS19600 PF00712 DNA polymerase III beta subunit, N-terminal domain BUM88_RS19605 PF08299 Bacterial dnaA protein helix-turn-helix BUM88_RS19605 PF00308 Bacterial dnaA protein BUM88_RS19605 PF11638 DnaA N-terminal domain BUM88_RS19610 PF00468 Ribosomal protein L34 BUM88_RS19615 PF00825 Ribonuclease P BUM88_RS19620 PF01809 Putative membrane protein insertion efficiency factor BUM88_RS19625 PF14849 YidC periplasmic domain BUM88_RS19625 PF02096 60Kd inner membrane protein BUM88_RS19630 PF10396 GTP-binding protein TrmE N-terminus BUM88_RS19630 PF01926 50S ribosome-binding GTPase BUM88_RS19630 PF12631 MnmE helical domain BUM88_RS19635 PF02583 Metal-sensitive transcriptional repressor BUM88_RS19640 PF01545 Cation efflux family BUM88_RS19640 PF16916 Dimerisation domain of Zinc Transporter BUM88_RS19645 PF13098 Thioredoxin-like domain BUM88_RS19645 PF10411 Disulfide bond isomerase protein N-terminus BUM88_RS19655 PF00156 Phosphoribosyl transferase domain BUM88_RS19660 PF01979 Amidohydrolase family BUM88_RS19665 PF00355 Rieske [2Fe-2S] domain BUM88_RS19670 PF03738 Glutathionylspermidine synthase preATP-grasp BUM88_RS19685 PF03741 Integral membrane protein TerC family BUM88_RS19690 PF01569 PAP2 superfamily BUM88_RS19700 PF01225 Mur ligase family, catalytic domain BUM88_RS19700 PF02875 Mur ligase family, glutamate ligase domain BUM88_RS19700 PF08245 Mur ligase middle domain BUM88_RS19710 PF00731 AIR carboxylase BUM88_RS19715 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BUM88_RS19715 PF02222 ATP-grasp domain BUM88_RS19720 PF13406 Transglycosylase SLT domain BUM88_RS19745 PF00012 Hsp70 protein BUM88_RS19750 PF01025 GrpE BUM88_RS19775 PF07859 alpha/beta hydrolase fold BUM88_RS19780 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD