locus-tag	class	description
Ahae11616_RS00010	COG0592	DNA-directed DNA polymerase activity
Ahae11616_RS00020	COG0187	DNA topoisomerase II activity
Ahae11616_RS00025	COG0586	Pfam SNARE associated Golgi protein
Ahae11616_RS00030	COG0488	(ABC) transporter
Ahae11616_RS00055	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
Ahae11616_RS00060	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
Ahae11616_RS00100	COG0471	metal ion transport
Ahae11616_RS00100	COG3273	potassium ion transport
Ahae11616_RS00110	COG1012	belongs to the aldehyde dehydrogenase family
Ahae11616_RS00115	COG3738	Protein conserved in bacteria
Ahae11616_RS00120	COG0733	neurotransmitter:sodium symporter activity
Ahae11616_RS00160	COG2233	PERMEase
Ahae11616_RS00180	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Ahae11616_RS00195	COG0484	heat shock protein binding
Ahae11616_RS00210	COG2814	Major facilitator Superfamily
Ahae11616_RS00215	COG0656	L-ascorbic acid biosynthetic process
Ahae11616_RS00220	COG0583	DNA-binding transcription factor activity
Ahae11616_RS00230	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
Ahae11616_RS00235	COG1064	alcohol dehydrogenase
Ahae11616_RS00240	COG2818	Glycosylase
Ahae11616_RS00255	COG1194	a g-specific adenine glycosylase
Ahae11616_RS00265	COG5487	UPF0391 membrane protein
Ahae11616_RS00270	COG2983	Belongs to the UPF0260 family
Ahae11616_RS00275	COG2133	pyrroloquinoline quinone binding
Ahae11616_RS00285	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
Ahae11616_RS00295	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
Ahae11616_RS00305	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
Ahae11616_RS00310	COG1335	isochorismatase
Ahae11616_RS00315	COG1522	sequence-specific DNA binding
Ahae11616_RS00335	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
Ahae11616_RS00345	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
Ahae11616_RS00350	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
Ahae11616_RS00355	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
Ahae11616_RS00375	COG0560	Phosphoserine phosphatase
Ahae11616_RS00375	COG3830	Belongs to the UPF0237 family
Ahae11616_RS00420	COG1278	Cold shock
Ahae11616_RS00460	COG0436	Aminotransferase
Ahae11616_RS00470	COG2733	membrane
Ahae11616_RS00485	COG2918	glutathione biosynthetic process
Ahae11616_RS00500	COG3150	esterase
Ahae11616_RS00510	COG0534	Mate efflux family protein
Ahae11616_RS00520	COG0559	Belongs to the binding-protein-dependent transport system permease family
Ahae11616_RS00535	COG0410	ABC transporter
Ahae11616_RS00545	COG1247	-acetyltransferase
Ahae11616_RS00575	COG0625	glutathione transferase activity
Ahae11616_RS00600	COG0708	Exodeoxyribonuclease III
Ahae11616_RS00630	COG0386	Belongs to the glutathione peroxidase family
Ahae11616_RS00635	COG0189	ligase activity
Ahae11616_RS00655	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
Ahae11616_RS00690	COG0508	dehydrogenase complex catalyzes the overall conversion of
Ahae11616_RS00700	COG2119	membrane
Ahae11616_RS00705	COG4774	siderophore transport
Ahae11616_RS00710	COG0426	domain, Protein
Ahae11616_RS00710	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
Ahae11616_RS00735	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
Ahae11616_RS00765	COG1902	pentaerythritol trinitrate reductase activity
Ahae11616_RS00770	COG1519	Transferase
Ahae11616_RS00780	COG0668	transmembrane transport
Ahae11616_RS00785	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
Ahae11616_RS00840	COG0351	phosphomethylpyrimidine kinase
Ahae11616_RS00840	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
Ahae11616_RS00840	COG0352	thiamine-phosphate diphosphorylase activity
Ahae11616_RS00850	COG2814	Major facilitator Superfamily
Ahae11616_RS00870	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
Ahae11616_RS00875	COG1012	belongs to the aldehyde dehydrogenase family
Ahae11616_RS00885	COG1335	isochorismatase
Ahae11616_RS00895	COG3349	Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'
Ahae11616_RS00955	COG0582	viral genome integration into host DNA
Ahae11616_RS00965	COG3158	transport of potassium into the cell
Ahae11616_RS00980	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
Ahae11616_RS00985	COG3676	manually curated
Ahae11616_RS01005	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
Ahae11616_RS01025	COG0659	secondary active sulfate transmembrane transporter activity
Ahae11616_RS01040	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
Ahae11616_RS01075	COG0427	acetyl-CoA hydrolase
Ahae11616_RS01080	COG2205	protein histidine kinase activity
Ahae11616_RS01085	COG0745	RESPONSE REGULATOR receiver
Ahae11616_RS01110	COG1028	Short-chain dehydrogenase reductase Sdr
Ahae11616_RS01115	COG0583	DNA-binding transcription factor activity
Ahae11616_RS01125	COG0789	Transcriptional regulator
Ahae11616_RS01130	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
Ahae11616_RS01130	COG3320	Male sterility
Ahae11616_RS01135	COG4221	oxidoreductase activity
Ahae11616_RS01145	COG0488	(ABC) transporter
Ahae11616_RS01215	COG0833	amino acid
Ahae11616_RS01240	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
Ahae11616_RS01260	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
Ahae11616_RS01265	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
Ahae11616_RS01270	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
Ahae11616_RS01275	COG2226	methyltransferase
Ahae11616_RS01325	COG0070	glutamate synthase
Ahae11616_RS01325	COG0069	glutamate synthase activity
Ahae11616_RS01325	COG0067	glutamate synthase
Ahae11616_RS01330	COG0493	'glutamate synthase
Ahae11616_RS01340	COG1704	LemA family
Ahae11616_RS01345	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
Ahae11616_RS01385	COG3307	-O-antigen
Ahae11616_RS01395	COG2906	2 iron, 2 sulfur cluster binding
Ahae11616_RS01405	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
Ahae11616_RS01415	COG0194	GDP metabolic process
Ahae11616_RS01420	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
Ahae11616_RS01425	COG4969	Belongs to the N-Me-Phe pilin family
Ahae11616_RS01475	COG2963	transposase activity
Ahae11616_RS01485	COG4372	Transposase
Ahae11616_RS01515	COG0228	four-way junction DNA binding
Ahae11616_RS01520	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
Ahae11616_RS01530	COG0335	large ribosomal subunit rRNA binding
Ahae11616_RS01540	COG5380	lipid catabolic process
Ahae11616_RS01545	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
Ahae11616_RS01570	COG0741	lytic transglycosylase activity
Ahae11616_RS01570	COG1196	nuclear chromosome segregation
Ahae11616_RS01570	COG0739	heme binding
Ahae11616_RS01575	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
Ahae11616_RS01580	COG0277	FAD linked oxidase domain protein
Ahae11616_RS01590	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
Ahae11616_RS01595	COG2249	NAD(P)H dehydrogenase (quinone) activity
Ahae11616_RS01610	COG1289	transmembrane transporter activity
Ahae11616_RS01615	COG0628	permease
Ahae11616_RS01620	COG1192	Involved in chromosome partitioning
Ahae11616_RS01630	COG2226	methyltransferase
Ahae11616_RS01665	COG1404	Belongs to the peptidase S8 family
Ahae11616_RS01680	COG2072	flavoprotein involved in K transport
Ahae11616_RS01740	COG0471	metal ion transport
Ahae11616_RS01745	COG4109	DRTGG domain
Ahae11616_RS01750	COG1983	PspC domain protein
Ahae11616_RS01760	COG1960	acyl-CoA dehydrogenase activity
Ahae11616_RS01820	COG1127	ABC transporter
Ahae11616_RS01825	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
Ahae11616_RS01830	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
Ahae11616_RS01835	COG2854	intermembrane phospholipid transfer
Ahae11616_RS01850	COG0598	Magnesium transport protein CorA
Ahae11616_RS01865	COG1040	competence protein
Ahae11616_RS01870	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
Ahae11616_RS01885	COG2937	Belongs to the GPAT DAPAT family
Ahae11616_RS01890	COG1946	Acyl-CoA thioesterase
Ahae11616_RS01895	COG1301	dicarboxylic acid transport
Ahae11616_RS01920	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
Ahae11616_RS01920	COG1017	nitric oxide dioxygenase activity
Ahae11616_RS01925	COG0433	COG0433 Predicted ATPase
Ahae11616_RS01945	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
Ahae11616_RS01965	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
Ahae11616_RS02015	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
Ahae11616_RS02050	COG0257	Belongs to the bacterial ribosomal protein bL36 family
Ahae11616_RS02060	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
Ahae11616_RS02075	COG0203	ribosomal protein L17
Ahae11616_RS02095	COG1960	acyl-CoA dehydrogenase activity
Ahae11616_RS02100	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
Ahae11616_RS02125	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
Ahae11616_RS02150	COG0339	signal peptide processing
Ahae11616_RS02155	COG0557	exoribonuclease II activity
Ahae11616_RS02225	COG0179	Fumarylacetoacetate (FAA) hydrolase
Ahae11616_RS02235	COG2207	Transcriptional regulator
Ahae11616_RS02245	COG1295	ribonuclease BN
Ahae11616_RS02275	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
Ahae11616_RS02300	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
Ahae11616_RS02300	COG2813	Specifically methylates the guanine in position
Ahae11616_RS02310	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
Ahae11616_RS02315	COG4771	TonB-dependent receptor
Ahae11616_RS02325	COG0740	serine-type endopeptidase activity
Ahae11616_RS02345	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
Ahae11616_RS02345	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
Ahae11616_RS02350	COG1917	Cupin 2, conserved barrel domain protein
Ahae11616_RS02350	COG2207	Transcriptional regulator
Ahae11616_RS02370	COG0280	phosphate acetyltransferase
Ahae11616_RS02370	COG0857	belongs to the CobB CobQ family
Ahae11616_RS02375	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
Ahae11616_RS02400	COG0793	Belongs to the peptidase S41A family
Ahae11616_RS02420	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
Ahae11616_RS02430	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
Ahae11616_RS02435	COG1408	metallophosphoesterase
Ahae11616_RS02445	COG2199	diguanylate cyclase activity
Ahae11616_RS02485	COG1960	acyl-CoA dehydrogenase activity
Ahae11616_RS02500	COG1309	transcriptional regulator
Ahae11616_RS02515	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
Ahae11616_RS02520	COG1960	acyl-CoA dehydrogenase activity
Ahae11616_RS02580	COG2969	positive regulation of protein catabolic process
Ahae11616_RS02585	COG0625	glutathione transferase activity
Ahae11616_RS02590	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Ahae11616_RS02595	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
Ahae11616_RS02605	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
Ahae11616_RS02610	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
Ahae11616_RS02615	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
Ahae11616_RS02630	COG2975	iron-sulfur cluster assembly
Ahae11616_RS02650	COG1426	Protein conserved in bacteria
Ahae11616_RS02685	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
Ahae11616_RS02695	COG1862	Preprotein translocase
Ahae11616_RS02725	COG5002	protein histidine kinase activity
Ahae11616_RS02730	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
Ahae11616_RS02740	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
Ahae11616_RS02775	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
Ahae11616_RS02775	COG2755	lipolytic protein G-D-S-L family
Ahae11616_RS02805	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
Ahae11616_RS02845	COG1960	acyl-CoA dehydrogenase activity
Ahae11616_RS02850	COG1960	acyl-CoA dehydrogenase activity
Ahae11616_RS02860	COG2205	protein histidine kinase activity
Ahae11616_RS02865	COG0745	RESPONSE REGULATOR receiver
Ahae11616_RS02900	COG2096	Adenosyltransferase
Ahae11616_RS02905	COG4206	TonB-dependent receptor
Ahae11616_RS02915	COG0133	tryptophan synthase activity
Ahae11616_RS02955	COG0285	dihydrofolate synthase activity
Ahae11616_RS03005	COG0477	Major facilitator Superfamily
Ahae11616_RS03010	COG1272	protein, Hemolysin III
Ahae11616_RS03045	COG0183	Belongs to the thiolase family
Ahae11616_RS03055	COG2207	Transcriptional regulator
Ahae11616_RS03060	COG1804	L-carnitine dehydratase bile acid-inducible protein F
Ahae11616_RS03105	COG2963	transposase activity
Ahae11616_RS03115	COG3676	manually curated
Ahae11616_RS03120	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
Ahae11616_RS03135	COG0183	Belongs to the thiolase family
Ahae11616_RS03145	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
Ahae11616_RS03145	COG2885	chlorophyll binding
Ahae11616_RS03150	COG2885	chlorophyll binding
Ahae11616_RS03150	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
Ahae11616_RS03155	COG1690	Belongs to the RtcB family
Ahae11616_RS03160	COG0833	amino acid
Ahae11616_RS03170	COG2233	PERMEase
Ahae11616_RS03180	COG1970	mechanosensitive ion channel activity
Ahae11616_RS03200	COG4772	TonB-dependent receptor
Ahae11616_RS03210	COG0354	folic acid binding
Ahae11616_RS03220	COG2824	Alkylphosphonate utilization operon protein PhnA
Ahae11616_RS03225	COG3422	double-strand break repair
Ahae11616_RS03260	COG0643	Histidine kinase
Ahae11616_RS03260	COG2198	Histidine kinase
Ahae11616_RS03260	COG0643	Histidine kinase
Ahae11616_RS03260	COG2198	Histidine kinase
Ahae11616_RS03275	COG5510	response to toxic substance
Ahae11616_RS03285	COG2832	Protein of unknown function (DUF454)
Ahae11616_RS03290	COG1376	ErfK ybiS ycfS ynhG family protein
Ahae11616_RS03345	COG2985	domain, Protein
Ahae11616_RS03350	COG4372	Transposase
Ahae11616_RS03360	COG2963	transposase activity
Ahae11616_RS03365	COG4372	Transposase
Ahae11616_RS03385	COG1289	transmembrane transporter activity
Ahae11616_RS03390	COG2814	Major facilitator Superfamily
Ahae11616_RS03405	COG0786	glutamate:sodium symporter activity
Ahae11616_RS03410	COG1115	amino acid carrier protein
Ahae11616_RS03415	COG1752	Esterase of the alpha-beta hydrolase superfamily
Ahae11616_RS03420	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
Ahae11616_RS03455	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
Ahae11616_RS03465	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
Ahae11616_RS03470	COG1077	Cell shape determining protein MreB Mrl
Ahae11616_RS03475	COG1792	Involved in formation and maintenance of cell shape
Ahae11616_RS03485	COG0424	maF-like protein
Ahae11616_RS03490	COG1530	ribonuclease E activity
Ahae11616_RS03500	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
Ahae11616_RS03510	COG0560	Phosphoserine phosphatase
Ahae11616_RS03525	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
Ahae11616_RS03530	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
Ahae11616_RS03535	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
Ahae11616_RS03540	COG2205	protein histidine kinase activity
Ahae11616_RS03545	COG0745	RESPONSE REGULATOR receiver
Ahae11616_RS03555	COG0671	phosphoesterase, PA-phosphatase related
Ahae11616_RS03615	COG1113	amino acid transport
Ahae11616_RS03620	COG2828	Protein conserved in bacteria
Ahae11616_RS03625	COG0142	geranyltranstransferase activity
Ahae11616_RS03640	COG1752	Esterase of the alpha-beta hydrolase superfamily
Ahae11616_RS03660	COG2194	sulfuric ester hydrolase activity
Ahae11616_RS03665	COG0745	RESPONSE REGULATOR receiver
Ahae11616_RS03670	COG0642	Histidine kinase
Ahae11616_RS03695	COG0765	amino acid transport
Ahae11616_RS03700	COG0765	amino acid transport
Ahae11616_RS03710	COG0004	ammonium transporteR
Ahae11616_RS03725	COG2852	Protein conserved in bacteria
Ahae11616_RS03730	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
Ahae11616_RS03735	COG0525	valine-tRNA ligase activity
Ahae11616_RS03750	COG1028	Short-chain dehydrogenase reductase Sdr
Ahae11616_RS03765	COG0393	Putative heavy-metal-binding
Ahae11616_RS03770	COG1538	Outer membrane efflux protein
Ahae11616_RS03780	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Ahae11616_RS03785	COG0671	phosphoesterase, PA-phosphatase related
Ahae11616_RS03815	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
Ahae11616_RS03830	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
Ahae11616_RS03830	COG1648	precorrin-2 dehydrogenase activity
Ahae11616_RS03835	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
Ahae11616_RS03845	COG1733	regulation of RNA biosynthetic process
Ahae11616_RS03855	COG0531	amino acid
Ahae11616_RS03870	COG0321	lipoyl(octanoyl) transferase activity
Ahae11616_RS03900	COG1280	lysine exporter protein (LysE YggA)
Ahae11616_RS03910	COG0500	methyltransferase
Ahae11616_RS03915	COG0586	Pfam SNARE associated Golgi protein
Ahae11616_RS03935	COG2009	succinate dehydrogenase
Ahae11616_RS03940	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
Ahae11616_RS03945	COG1053	succinate dehydrogenase
Ahae11616_RS03950	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
Ahae11616_RS03970	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
Ahae11616_RS03985	COG4372	Transposase
Ahae11616_RS03995	COG2963	transposase activity
Ahae11616_RS04005	COG0456	acetyltransferase
Ahae11616_RS04035	COG2268	Band 7 protein
Ahae11616_RS04040	COG1585	Membrane protein implicated in regulation of membrane protease activity
Ahae11616_RS04050	COG2354	Protein conserved in bacteria
Ahae11616_RS04110	COG0110	maltose O-acetyltransferase activity
Ahae11616_RS04130	COG0505	Belongs to the CarA family
Ahae11616_RS04160	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
Ahae11616_RS04170	COG2304	oxidoreductase activity
Ahae11616_RS04205	COG0584	glycerophosphoryl diester phosphodiesterase
Ahae11616_RS04210	COG2194	sulfuric ester hydrolase activity
Ahae11616_RS04215	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
Ahae11616_RS04220	COG2239	Acts as a magnesium transporter
Ahae11616_RS04230	COG0501	Belongs to the peptidase M48B family
Ahae11616_RS04235	COG1196	nuclear chromosome segregation
Ahae11616_RS04235	COG0741	lytic transglycosylase activity
Ahae11616_RS04235	COG0739	heme binding
Ahae11616_RS04250	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
Ahae11616_RS04255	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
Ahae11616_RS04265	COG0582	viral genome integration into host DNA
Ahae11616_RS04270	COG2826	transposase and inactivated derivatives, IS30 family
Ahae11616_RS04420	COG4638	Rieske (2fe-2S)
Ahae11616_RS04425	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
Ahae11616_RS04430	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
Ahae11616_RS04430	COG0543	2 iron, 2 sulfur cluster binding
Ahae11616_RS04445	COG2801	Transposase and inactivated derivatives
Ahae11616_RS04465	COG2814	Major facilitator Superfamily
Ahae11616_RS04490	COG1570	exodeoxyribonuclease VII activity
Ahae11616_RS04565	COG2963	transposase activity
Ahae11616_RS04575	COG4372	Transposase
Ahae11616_RS04585	COG0725	ABC transporter, periplasmic molybdate-binding protein
Ahae11616_RS04590	COG4149	molybdate abc transporter
Ahae11616_RS04610	COG4521	taurine ABC transporter
Ahae11616_RS04615	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
Ahae11616_RS04620	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
Ahae11616_RS04625	COG2175	clavaminate synthase activity
Ahae11616_RS04650	COG0589	response to stress
Ahae11616_RS04665	COG0242	peptide deformylase activity
Ahae11616_RS04700	COG0306	phosphate transporter
Ahae11616_RS04730	COG1115	amino acid carrier protein
Ahae11616_RS04740	COG0019	diaminopimelate decarboxylase activity
Ahae11616_RS04745	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
Ahae11616_RS04755	COG1280	lysine exporter protein (LysE YggA)
Ahae11616_RS04760	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
Ahae11616_RS04775	COG2318	DinB family
Ahae11616_RS04785	COG0842	Transport permease protein
Ahae11616_RS04795	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Ahae11616_RS04825	COG1671	Belongs to the UPF0178 family
Ahae11616_RS04840	COG4591	ABC-type transport system involved in lipoprotein release permease component
Ahae11616_RS04845	COG1136	(ABC) transporter
Ahae11616_RS04850	COG2333	competence protein COMEC
Ahae11616_RS04850	COG0658	competence protein
Ahae11616_RS04860	COG0616	signal peptide processing
Ahae11616_RS04860	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
Ahae11616_RS04870	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
Ahae11616_RS04880	COG0628	permease
Ahae11616_RS04920	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
Ahae11616_RS04940	COG0823	Involved in the tonB-independent uptake of proteins
Ahae11616_RS04960	COG0824	Thioesterase
Ahae11616_RS04970	COG2255	four-way junction helicase activity
Ahae11616_RS04985	COG0047	phosphoribosylformylglycinamidine synthase activity
Ahae11616_RS04985	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
Ahae11616_RS05005	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
Ahae11616_RS05005	COG3323	Protein of unknown function (DUF1653)
Ahae11616_RS05010	COG0778	Nitroreductase
Ahae11616_RS05015	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
Ahae11616_RS05015	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
Ahae11616_RS05015	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
Ahae11616_RS05020	COG1105	Belongs to the carbohydrate kinase PfkB family
Ahae11616_RS05025	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
Ahae11616_RS05025	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
Ahae11616_RS05030	COG1024	Enoyl-CoA hydratase
Ahae11616_RS05035	COG1056	cytidyltransferase-related domain
Ahae11616_RS05035	COG1051	belongs to the nudix hydrolase family
Ahae11616_RS05040	COG0583	DNA-binding transcription factor activity
Ahae11616_RS05045	COG1942	4-Oxalocrotonate Tautomerase
Ahae11616_RS05065	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
Ahae11616_RS05080	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
Ahae11616_RS05085	COG0602	queuosine metabolic process
Ahae11616_RS05100	COG0583	DNA-binding transcription factor activity
Ahae11616_RS05105	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
Ahae11616_RS05110	COG4208	sulfate ABC transporter
Ahae11616_RS05115	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
Ahae11616_RS05125	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
Ahae11616_RS05130	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
Ahae11616_RS05135	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
Ahae11616_RS05150	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Ahae11616_RS05160	COG0481	GTPase activity
Ahae11616_RS05175	COG0571	ribonuclease III activity
Ahae11616_RS05180	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
Ahae11616_RS05195	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
Ahae11616_RS05255	COG0556	nucleotide-excision repair
Ahae11616_RS05300	COG1840	ABC-type Fe3 transport system, periplasmic component
Ahae11616_RS05325	COG0583	DNA-binding transcription factor activity
Ahae11616_RS05330	COG0596	Alpha beta hydrolase
Ahae11616_RS05335	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
Ahae11616_RS05340	COG1773	rubredoxin
Ahae11616_RS05350	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
Ahae11616_RS05360	COG0175	sulfate reduction
Ahae11616_RS05375	COG0222	ribosome binding
Ahae11616_RS05380	COG1253	flavin adenine dinucleotide binding
Ahae11616_RS05395	COG3015	lipoprotein NlpE involved in copper resistance
Ahae11616_RS05410	COG0517	IMP dehydrogenase activity
Ahae11616_RS05410	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
Ahae11616_RS05415	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
Ahae11616_RS05425	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
Ahae11616_RS05430	COG1137	ATPase activity
Ahae11616_RS05475	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
Ahae11616_RS05520	COG0583	DNA-binding transcription factor activity
Ahae11616_RS05525	COG2826	transposase and inactivated derivatives, IS30 family
Ahae11616_RS05555	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
Ahae11616_RS05580	COG0204	Acyl-transferase
Ahae11616_RS05585	COG4783	chaperone-mediated protein folding
Ahae11616_RS05610	COG1610	YqeY-like protein
Ahae11616_RS05615	COG0828	Belongs to the bacterial ribosomal protein bS21 family
Ahae11616_RS05685	COG0028	Belongs to the TPP enzyme family
Ahae11616_RS05705	COG0482	sulfurtransferase activity
Ahae11616_RS05720	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
Ahae11616_RS05725	COG1686	Belongs to the peptidase S11 family
Ahae11616_RS05745	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
Ahae11616_RS05755	COG0583	DNA-binding transcription factor activity
Ahae11616_RS05760	COG1067	ATP-dependent peptidase activity
Ahae11616_RS05780	COG0254	rRNA binding
Ahae11616_RS05795	COG1509	lysine 2,3-aminomutase activity
Ahae11616_RS05800	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
Ahae11616_RS05805	COG1966	Carbon starvation protein
Ahae11616_RS05810	COG2879	small protein
Ahae11616_RS05815	COG0714	Associated with various cellular activities
Ahae11616_RS05885	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
Ahae11616_RS05905	COG2826	transposase and inactivated derivatives, IS30 family
Ahae11616_RS05935	COG1513	Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide
Ahae11616_RS05940	COG2116	formate transmembrane transporter activity
Ahae11616_RS05945	COG0515	serine threonine protein kinase
Ahae11616_RS05970	COG1741	Belongs to the pirin family
Ahae11616_RS05985	COG0446	pyridine nucleotide-disulphide oxidoreductase
Ahae11616_RS05985	COG1902	pentaerythritol trinitrate reductase activity
Ahae11616_RS06005	COG4372	Transposase
Ahae11616_RS06110	COG0582	viral genome integration into host DNA
Ahae11616_RS06155	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
Ahae11616_RS06185	COG2233	PERMEase
Ahae11616_RS06190	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
Ahae11616_RS06195	COG0251	oxidation-reduction process
Ahae11616_RS06200	COG1335	isochorismatase
Ahae11616_RS06205	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Ahae11616_RS06210	COG0778	Nitroreductase
Ahae11616_RS06215	COG0596	Alpha beta hydrolase
Ahae11616_RS06230	COG0582	viral genome integration into host DNA
Ahae11616_RS06235	COG0582	viral genome integration into host DNA
Ahae11616_RS06245	COG4115	mRNA cleavage
Ahae11616_RS06250	COG2161	toxin-antitoxin pair type II binding
Ahae11616_RS06265	COG2963	transposase activity
Ahae11616_RS06275	COG4372	Transposase
Ahae11616_RS06380	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
Ahae11616_RS06390	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
Ahae11616_RS06395	COG1469	GTP cyclohydrolase I activity
Ahae11616_RS06410	COG0523	cobalamin synthesis protein
Ahae11616_RS06415	COG1414	Transcriptional regulator
Ahae11616_RS06420	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
Ahae11616_RS06425	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
Ahae11616_RS06430	COG0183	Belongs to the thiolase family
Ahae11616_RS06435	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
Ahae11616_RS06440	COG0596	Alpha beta hydrolase
Ahae11616_RS06445	COG2271	Major facilitator Superfamily
Ahae11616_RS06450	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
Ahae11616_RS06455	COG3485	protocatechuate 3,4-dioxygenase
Ahae11616_RS06460	COG3485	protocatechuate 3,4-dioxygenase
Ahae11616_RS06465	COG0710	3-dehydroquinate dehydratase activity
Ahae11616_RS06470	COG3420	alginic acid biosynthetic process
Ahae11616_RS06475	COG3659	wide pore channel activity
Ahae11616_RS06480	COG4993	Dehydrogenase
Ahae11616_RS06490	COG2351	hydroxyisourate hydrolase activity
Ahae11616_RS06495	COG2233	PERMEase
Ahae11616_RS06515	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Ahae11616_RS06520	COG2186	Transcriptional regulator
Ahae11616_RS06525	COG4266	Belongs to the allantoicase family
Ahae11616_RS06550	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
Ahae11616_RS06560	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
Ahae11616_RS06575	COG0583	DNA-binding transcription factor activity
Ahae11616_RS06585	COG2188	Transcriptional regulator
Ahae11616_RS06605	COG0010	Belongs to the arginase family
Ahae11616_RS06610	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
Ahae11616_RS06615	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
Ahae11616_RS06650	COG0243	molybdopterin cofactor binding
Ahae11616_RS06655	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
Ahae11616_RS06660	COG2837	iron assimilation
Ahae11616_RS06670	COG1538	Outer membrane efflux protein
Ahae11616_RS06675	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
Ahae11616_RS06680	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Ahae11616_RS06685	COG0745	RESPONSE REGULATOR receiver
Ahae11616_RS06690	COG5002	protein histidine kinase activity
Ahae11616_RS06695	COG3040	lipid binding
Ahae11616_RS06715	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
Ahae11616_RS06725	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
Ahae11616_RS06730	COG0642	Histidine kinase
Ahae11616_RS06750	COG1309	transcriptional regulator
Ahae11616_RS06780	COG2072	flavoprotein involved in K transport
Ahae11616_RS06785	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
Ahae11616_RS06790	COG1560	Kdo2-lipid A biosynthetic process
Ahae11616_RS06795	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
Ahae11616_RS06800	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
Ahae11616_RS06805	COG4770	biotin carboxylase activity
Ahae11616_RS06810	COG0501	Belongs to the peptidase M48B family
Ahae11616_RS06820	COG1765	OsmC-like protein
Ahae11616_RS06870	COG4133	protoheme IX ABC transporter activity
Ahae11616_RS06900	COG0308	aminopeptidase N
Ahae11616_RS06905	COG1760	l-serine dehydratase
Ahae11616_RS06925	COG1714	RDD family
Ahae11616_RS06935	COG0475	glutathione-regulated potassium exporter activity
Ahae11616_RS06935	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
Ahae11616_RS06940	COG3135	benzoate transporter
Ahae11616_RS06955	COG0583	DNA-binding transcription factor activity
Ahae11616_RS06985	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
Ahae11616_RS07015	COG0316	Belongs to the HesB IscA family
Ahae11616_RS07020	COG0822	iron-sulfur transferase activity
Ahae11616_RS07045	COG0776	regulation of translation
Ahae11616_RS07050	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
Ahae11616_RS07065	COG2137	regulation of response to DNA damage stimulus
Ahae11616_RS07075	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
Ahae11616_RS07080	COG1011	Hydrolase
Ahae11616_RS07085	COG1218	3'(2'),5'-bisphosphate nucleotidase
Ahae11616_RS07105	COG0268	Binds directly to 16S ribosomal RNA
Ahae11616_RS07110	COG0702	epimerase
Ahae11616_RS07115	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
Ahae11616_RS07135	COG0183	Belongs to the thiolase family
Ahae11616_RS07180	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
Ahae11616_RS07200	COG0424	maF-like protein
Ahae11616_RS07255	COG1286	toxin biosynthetic process
Ahae11616_RS07300	COG3634	alkyl hydroperoxide reductase activity
Ahae11616_RS07335	COG0436	Aminotransferase
Ahae11616_RS07340	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
Ahae11616_RS07345	COG0386	Belongs to the glutathione peroxidase family
Ahae11616_RS07355	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Ahae11616_RS07375	COG1522	sequence-specific DNA binding
Ahae11616_RS07385	COG0436	Aminotransferase
Ahae11616_RS07410	COG1253	flavin adenine dinucleotide binding
Ahae11616_RS07415	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
Ahae11616_RS07425	COG0012	GTP binding
Ahae11616_RS07430	COG2011	ABC-type metal ion transport system permease component
Ahae11616_RS07435	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
Ahae11616_RS07440	COG1464	Belongs to the NlpA lipoprotein family
Ahae11616_RS07480	COG2195	Cleaves the N-terminal amino acid of tripeptides
Ahae11616_RS07490	COG3550	peptidyl-serine autophosphorylation
Ahae11616_RS07535	COG2363	Small membrane protein
Ahae11616_RS07555	COG0513	Belongs to the DEAD box helicase family
Ahae11616_RS07565	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
Ahae11616_RS07580	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
Ahae11616_RS07590	COG1192	Involved in chromosome partitioning
Ahae11616_RS07595	COG1475	DNA binding
Ahae11616_RS07600	COG0811	peptide transport
Ahae11616_RS07610	COG1132	(ABC) transporter
Ahae11616_RS07615	COG1663	tetraacyldisaccharide 4'-kinase activity
Ahae11616_RS07640	COG0084	hydrolase, TatD family'
Ahae11616_RS07685	COG0590	tRNA wobble adenosine to inosine editing
Ahae11616_RS07705	COG0776	regulation of translation
Ahae11616_RS07720	COG2431	L-lysine efflux transmembrane transporter activity
Ahae11616_RS07735	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
Ahae11616_RS07740	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
Ahae11616_RS07780	COG0024	Methionine aminopeptidase
Ahae11616_RS07785	COG0583	DNA-binding transcription factor activity
Ahae11616_RS07795	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
Ahae11616_RS07800	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
Ahae11616_RS07805	COG0517	IMP dehydrogenase activity
Ahae11616_RS07805	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
Ahae11616_RS07830	COG0552	protein localization to endoplasmic reticulum
Ahae11616_RS07855	COG4890	Cyd operon protein YbgT
Ahae11616_RS07860	COG1294	oxidase, subunit
Ahae11616_RS07885	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
Ahae11616_RS07905	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
Ahae11616_RS07910	COG0569	domain protein
Ahae11616_RS07915	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
Ahae11616_RS07920	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
Ahae11616_RS07955	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
Ahae11616_RS07965	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
Ahae11616_RS07970	COG0542	response to heat
Ahae11616_RS07980	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
Ahae11616_RS07985	COG2267	carboxylic ester hydrolase activity
Ahae11616_RS07995	COG0446	pyridine nucleotide-disulphide oxidoreductase
Ahae11616_RS07995	COG1902	pentaerythritol trinitrate reductase activity
Ahae11616_RS08030	COG0148	phosphopyruvate hydratase activity
Ahae11616_RS08035	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
Ahae11616_RS08100	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
Ahae11616_RS08110	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
Ahae11616_RS08125	COG1802	Transcriptional regulator
Ahae11616_RS08140	COG2207	Transcriptional regulator
Ahae11616_RS08145	COG1063	alcohol dehydrogenase
Ahae11616_RS08155	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
Ahae11616_RS08200	COG1944	ATP diphosphatase activity
Ahae11616_RS08220	COG1522	sequence-specific DNA binding
Ahae11616_RS08235	COG0439	Biotin carboxylase
Ahae11616_RS08255	COG0864	Transcriptional regulator
Ahae11616_RS08260	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
Ahae11616_RS08270	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
Ahae11616_RS08275	COG1595	DNA-templated transcription, initiation
Ahae11616_RS08335	COG0583	DNA-binding transcription factor activity
Ahae11616_RS08350	COG1024	Enoyl-CoA hydratase
Ahae11616_RS08355	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
Ahae11616_RS08360	COG1960	acyl-CoA dehydrogenase activity
Ahae11616_RS08365	COG1309	transcriptional regulator
Ahae11616_RS08370	COG0318	PFAM AMP-dependent synthetase and ligase
Ahae11616_RS08385	COG2814	Major facilitator Superfamily
Ahae11616_RS08405	COG0583	DNA-binding transcription factor activity
Ahae11616_RS08415	COG4774	siderophore transport
Ahae11616_RS08450	COG2249	NAD(P)H dehydrogenase (quinone) activity
Ahae11616_RS08460	COG3706	GGDEF domain
Ahae11616_RS08480	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
Ahae11616_RS08515	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
Ahae11616_RS08560	COG0537	adenosine 5'-monophosphoramidase activity
Ahae11616_RS08585	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
Ahae11616_RS08605	COG0730	response to heat
Ahae11616_RS08610	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
Ahae11616_RS08620	COG4771	TonB-dependent receptor
Ahae11616_RS08640	COG0406	alpha-ribazole phosphatase activity
Ahae11616_RS08645	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
Ahae11616_RS08660	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
Ahae11616_RS08675	COG2814	Major facilitator Superfamily
Ahae11616_RS08720	COG1960	acyl-CoA dehydrogenase activity
Ahae11616_RS08725	COG1960	acyl-CoA dehydrogenase activity
Ahae11616_RS08730	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
Ahae11616_RS08740	COG2207	Transcriptional regulator
Ahae11616_RS08745	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
Ahae11616_RS08780	COG0575	Belongs to the CDS family
Ahae11616_RS08785	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
Ahae11616_RS08795	COG0528	UMP kinase activity
Ahae11616_RS08805	COG3852	Histidine kinase
Ahae11616_RS08810	COG2204	response regulator
Ahae11616_RS08815	COG1309	transcriptional regulator
Ahae11616_RS08865	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
Ahae11616_RS08885	COG0697	spore germination
Ahae11616_RS08890	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
Ahae11616_RS08900	COG0303	'Molybdopterin
Ahae11616_RS08905	COG0521	Mo-molybdopterin cofactor biosynthetic process
Ahae11616_RS08905	COG0315	cyclic pyranopterin monophosphate synthase activity
Ahae11616_RS08920	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
Ahae11616_RS08925	COG0243	molybdopterin cofactor binding
Ahae11616_RS08930	COG3048	D-serine ammonia-lyase activity
Ahae11616_RS08940	COG0243	molybdopterin cofactor binding
Ahae11616_RS08945	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
Ahae11616_RS08950	COG2146	nitrite reductase [NAD(P)H] activity
Ahae11616_RS08950	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
Ahae11616_RS08955	COG2223	nitrite transmembrane transporter activity
Ahae11616_RS08965	COG1116	anion transmembrane transporter activity
Ahae11616_RS08965	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
Ahae11616_RS08980	COG0439	Biotin carboxylase
Ahae11616_RS08995	COG2814	Major facilitator Superfamily
Ahae11616_RS09005	COG0069	glutamate synthase activity
Ahae11616_RS09025	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
Ahae11616_RS09030	COG1454	alcohol dehydrogenase
Ahae11616_RS09045	COG2850	peptidyl-arginine hydroxylation
Ahae11616_RS09075	COG0640	Transcriptional regulator
Ahae11616_RS09100	COG0668	transmembrane transport
Ahae11616_RS09115	COG1132	(ABC) transporter
Ahae11616_RS09135	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
Ahae11616_RS09145	COG0506	proline dehydrogenase activity
Ahae11616_RS09145	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
Ahae11616_RS09145	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
Ahae11616_RS09155	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
Ahae11616_RS09165	COG3698	Phosphodiester glycosidase
Ahae11616_RS09180	COG3153	acetyltransferase
Ahae11616_RS09185	COG2353	YceI-like domain
Ahae11616_RS09205	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
Ahae11616_RS09210	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
Ahae11616_RS09225	COG3042	response to heat
Ahae11616_RS09245	COG1278	Cold shock
Ahae11616_RS09250	COG1278	Cold shock
Ahae11616_RS09270	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
Ahae11616_RS09270	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
Ahae11616_RS09295	COG3539	Fimbrial protein
Ahae11616_RS09325	COG2826	transposase and inactivated derivatives, IS30 family
Ahae11616_RS09365	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
Ahae11616_RS09380	COG1960	acyl-CoA dehydrogenase activity
Ahae11616_RS09385	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
Ahae11616_RS09405	COG3501	Rhs element vgr protein
Ahae11616_RS09410	COG3139	Protein of unknown function (DUF1315)
Ahae11616_RS09415	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
Ahae11616_RS09420	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
Ahae11616_RS09430	COG0494	nUDIX hydrolase
Ahae11616_RS09440	COG0642	Histidine kinase
Ahae11616_RS09445	COG0745	RESPONSE REGULATOR receiver
Ahae11616_RS09455	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
Ahae11616_RS09460	COG1720	tRNA m6t6A37 methyltransferase activity
Ahae11616_RS09495	COG0583	DNA-binding transcription factor activity
Ahae11616_RS09500	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
Ahae11616_RS09510	COG2814	Major facilitator Superfamily
Ahae11616_RS09515	COG4607	ABC-type enterochelin transport system periplasmic component
Ahae11616_RS09520	COG4604	ABC transporter, ATP-binding protein
Ahae11616_RS09525	COG4605	iron ion homeostasis
Ahae11616_RS09530	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
Ahae11616_RS09540	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
Ahae11616_RS09550	COG0471	metal ion transport
Ahae11616_RS09575	COG0729	surface antigen
Ahae11616_RS09610	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
Ahae11616_RS09640	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
Ahae11616_RS09720	COG1131	(ABC) transporter
Ahae11616_RS09725	COG0842	Transport permease protein
Ahae11616_RS09740	COG0772	Belongs to the SEDS family
Ahae11616_RS09745	COG2951	lytic endotransglycosylase activity
Ahae11616_RS09770	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
Ahae11616_RS09790	COG1643	Atp-dependent helicase
Ahae11616_RS09795	COG0450	alkyl hydroperoxide reductase
Ahae11616_RS09805	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
Ahae11616_RS09825	COG3634	alkyl hydroperoxide reductase activity
Ahae11616_RS09845	COG0220	tRNA (guanine-N7-)-methyltransferase activity
Ahae11616_RS09860	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
Ahae11616_RS09875	COG0531	amino acid
Ahae11616_RS09880	COG4303	Ethanolamine ammonia lyase large subunit
Ahae11616_RS09885	COG4302	ethanolamine ammonia-lyase activity
Ahae11616_RS09895	COG0519	Catalyzes the synthesis of GMP from XMP
Ahae11616_RS09895	COG0518	GMP synthase (glutamine-hydrolyzing) activity
Ahae11616_RS09910	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
Ahae11616_RS09920	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
Ahae11616_RS09930	COG2249	NAD(P)H dehydrogenase (quinone) activity
Ahae11616_RS09940	COG0697	spore germination
Ahae11616_RS09945	COG1923	regulation of RNA biosynthetic process
Ahae11616_RS09955	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
Ahae11616_RS09960	COG0802	atpase or kinase
Ahae11616_RS09990	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Ahae11616_RS09995	COG3300	MHYT domain
Ahae11616_RS09995	COG5001	Diguanylate cyclase
Ahae11616_RS10015	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
Ahae11616_RS10020	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
Ahae11616_RS10025	COG1845	cytochrome c oxidase, subunit III
Ahae11616_RS10030	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
Ahae11616_RS10060	COG0305	Participates in initiation and elongation during chromosome replication
Ahae11616_RS10065	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
Ahae11616_RS10080	COG1305	Transglutaminase-like
Ahae11616_RS10090	COG2308	Evidence 4 Homologs of previously reported genes of
Ahae11616_RS10100	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
Ahae11616_RS10115	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
Ahae11616_RS10125	COG0527	aspartate kinase activity
Ahae11616_RS10135	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
Ahae11616_RS10145	COG3038	cytochrome b561
Ahae11616_RS10150	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
Ahae11616_RS10155	COG2252	PERMEase
Ahae11616_RS10235	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
Ahae11616_RS10240	COG0138	bifunctional purine biosynthesis protein purh
Ahae11616_RS10245	COG0151	Belongs to the GarS family
Ahae11616_RS10250	COG1464	Belongs to the NlpA lipoprotein family
Ahae11616_RS10255	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
Ahae11616_RS10260	COG2011	ABC-type metal ion transport system permease component
Ahae11616_RS10275	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
Ahae11616_RS10285	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
Ahae11616_RS10290	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
Ahae11616_RS10295	COG1385	rRNA (uridine-N3-)-methyltransferase activity
Ahae11616_RS10320	COG0052	Belongs to the universal ribosomal protein uS2 family
Ahae11616_RS10325	COG0024	Methionine aminopeptidase
Ahae11616_RS10335	COG2223	nitrite transmembrane transporter activity
Ahae11616_RS10345	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Ahae11616_RS10350	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
Ahae11616_RS10355	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
Ahae11616_RS10400	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
Ahae11616_RS10405	COG3161	chorismate lyase activity
Ahae11616_RS10410	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
Ahae11616_RS10415	COG2852	Protein conserved in bacteria
Ahae11616_RS10440	COG0512	Glutamine amidotransferase of anthranilate synthase
Ahae11616_RS10450	COG3217	Mosc domain protein beta barrel domain protein
Ahae11616_RS10450	COG0633	Ferredoxin
Ahae11616_RS10475	COG0302	gtp cyclohydrolase
Ahae11616_RS10500	COG3739	integral membrane protein
Ahae11616_RS10525	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
Ahae11616_RS10540	COG4172	Belongs to the ABC transporter superfamily
Ahae11616_RS10545	COG4239	(ABC) transporter, permease
Ahae11616_RS10550	COG4174	ABC transporter (Permease)
Ahae11616_RS10555	COG4166	transmembrane transport
Ahae11616_RS10560	COG1388	LysM domain
Ahae11616_RS10560	COG0741	lytic transglycosylase activity
Ahae11616_RS10560	COG1388	LysM domain
Ahae11616_RS10560	COG0741	lytic transglycosylase activity
Ahae11616_RS10565	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
Ahae11616_RS10575	COG2816	NAD+ diphosphatase activity
Ahae11616_RS10605	COG0583	DNA-binding transcription factor activity
Ahae11616_RS10610	COG1279	arginine transmembrane transporter activity
Ahae11616_RS10630	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Ahae11616_RS10635	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Ahae11616_RS10640	COG0006	proline dipeptidase activity
Ahae11616_RS10670	COG2217	Heavy metal translocating P-type atpase
Ahae11616_RS10685	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
Ahae11616_RS10700	COG3384	dioxygenase
Ahae11616_RS10710	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
Ahae11616_RS10720	COG2826	transposase and inactivated derivatives, IS30 family
Ahae11616_RS10745	COG3501	Rhs element vgr protein
Ahae11616_RS10750	COG2878	Part of a membrane complex involved in electron transport
Ahae11616_RS10755	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
Ahae11616_RS10780	COG0768	penicillin binding
Ahae11616_RS10785	COG0742	ribosomal rna small subunit methyltransferase
Ahae11616_RS10810	COG0616	signal peptide processing
Ahae11616_RS10815	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
Ahae11616_RS10825	COG0573	inorganic phosphate transmembrane transporter activity
Ahae11616_RS10840	COG0076	glutamate decarboxylase activity
Ahae11616_RS10845	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
Ahae11616_RS10855	COG1309	transcriptional regulator
Ahae11616_RS10885	COG0783	Belongs to the Dps family
Ahae11616_RS10895	COG0564	pseudouridine synthase activity
Ahae11616_RS10910	COG0352	thiamine-phosphate diphosphorylase activity
Ahae11616_RS10940	COG0612	Peptidase, M16
Ahae11616_RS10945	COG0384	phenazine biosynthesis protein PhzF
Ahae11616_RS10980	COG1686	Belongs to the peptidase S11 family
Ahae11616_RS10985	COG1252	NADH dehydrogenase
Ahae11616_RS10995	COG0415	Belongs to the DNA photolyase family
Ahae11616_RS11015	COG1271	oxidase subunit
Ahae11616_RS11020	COG1294	oxidase, subunit
Ahae11616_RS11040	COG0457	Tetratricopeptide repeat
Ahae11616_RS11040	COG0705	Rhomboid family
Ahae11616_RS11050	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
Ahae11616_RS11055	COG4181	ATPase activity
Ahae11616_RS11065	COG0456	acetyltransferase
Ahae11616_RS11085	COG4771	TonB-dependent receptor
Ahae11616_RS11105	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
Ahae11616_RS11130	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
Ahae11616_RS11135	COG1597	lipid kinase activity
Ahae11616_RS11140	COG1274	phosphoenolpyruvate carboxykinase (GTP) activity
Ahae11616_RS11180	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
Ahae11616_RS11190	COG2388	GCN5-related N-acetyl-transferase
Ahae11616_RS11215	COG3152	Membrane
Ahae11616_RS11280	COG4681	YaeQ
Ahae11616_RS11285	COG0523	cobalamin synthesis protein
Ahae11616_RS11295	COG1607	acyl-coa hydrolase
Ahae11616_RS11315	COG2814	Major facilitator Superfamily
Ahae11616_RS11320	COG1024	Enoyl-CoA hydratase
Ahae11616_RS11325	COG1012	belongs to the aldehyde dehydrogenase family
Ahae11616_RS11335	COG1960	acyl-CoA dehydrogenase activity
Ahae11616_RS11360	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Ahae11616_RS11365	COG1414	Transcriptional regulator
Ahae11616_RS11370	COG0281	malic enzyme
Ahae11616_RS11375	COG0833	amino acid
Ahae11616_RS11390	COG1012	belongs to the aldehyde dehydrogenase family
Ahae11616_RS11400	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
Ahae11616_RS11405	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
Ahae11616_RS11415	COG1960	acyl-CoA dehydrogenase activity
Ahae11616_RS11420	COG1454	alcohol dehydrogenase
Ahae11616_RS11495	COG2814	Major facilitator Superfamily
Ahae11616_RS11500	COG1566	PFAM secretion protein HlyD family protein
Ahae11616_RS11505	COG2050	protein possibly involved in aromatic compounds catabolism
Ahae11616_RS11515	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
Ahae11616_RS11520	COG1090	epimerase
Ahae11616_RS11540	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
Ahae11616_RS11545	COG0420	3'-5' exonuclease activity
Ahae11616_RS11575	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
Ahae11616_RS11580	COG2914	Belongs to the UPF0125 (RnfH) family
Ahae11616_RS11595	COG0121	glutamine amidotransferase
Ahae11616_RS11610	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
Ahae11616_RS11615	COG0756	dUTP diphosphatase activity
Ahae11616_RS11620	COG0210	DNA helicase
Ahae11616_RS11625	COG2885	chlorophyll binding
Ahae11616_RS11630	COG0204	Acyl-transferase
Ahae11616_RS11640	COG0850	regulation of cytokinetic process
Ahae11616_RS11645	COG2894	cell division
Ahae11616_RS11650	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
Ahae11616_RS11660	COG1280	lysine exporter protein (LysE YggA)
Ahae11616_RS11665	COG0531	amino acid
Ahae11616_RS11665	COG1674	ftsk spoiiie
Ahae11616_RS11670	COG0492	ferredoxin-NADP+ reductase activity
Ahae11616_RS11675	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
Ahae11616_RS11685	COG0456	acetyltransferase
Ahae11616_RS11700	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
Ahae11616_RS11710	COG0049	tRNA binding
Ahae11616_RS11765	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
Ahae11616_RS11765	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
Ahae11616_RS11790	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
Ahae11616_RS11800	COG0582	viral genome integration into host DNA
Ahae11616_RS11900	COG2205	protein histidine kinase activity
Ahae11616_RS11905	COG2217	Heavy metal translocating P-type atpase
Ahae11616_RS12030	COG0564	pseudouridine synthase activity
Ahae11616_RS12040	COG0358	DNA primase activity
Ahae11616_RS12075	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
Ahae11616_RS12105	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
Ahae11616_RS12140	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
Ahae11616_RS12150	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
Ahae11616_RS12150	COG0352	thiamine-phosphate diphosphorylase activity
Ahae11616_RS12150	COG0351	phosphomethylpyrimidine kinase
Ahae11616_RS12160	COG1652	LysM domain
Ahae11616_RS12190	COG0333	Belongs to the bacterial ribosomal protein bL32 family
Ahae11616_RS12195	COG1399	metal-binding, possibly nucleic acid-binding protein
Ahae11616_RS12200	COG3101	peptidyl-lysine hydroxylation
Ahae11616_RS12205	COG0009	L-threonylcarbamoyladenylate synthase
Ahae11616_RS12225	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
Ahae11616_RS12230	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
Ahae11616_RS12265	COG4166	transmembrane transport
Ahae11616_RS12310	COG4106	trans-aconitate 2-methyltransferase activity
Ahae11616_RS12325	COG0596	Alpha beta hydrolase
Ahae11616_RS12335	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
Ahae11616_RS12350	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
Ahae11616_RS12360	COG1196	nuclear chromosome segregation
Ahae11616_RS12370	COG0730	response to heat
Ahae11616_RS12395	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
Ahae11616_RS12455	COG0489	protein tyrosine kinase activity
Ahae11616_RS12475	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
Ahae11616_RS12475	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
Ahae11616_RS12515	COG2515	1-aminocyclopropane-1-carboxylate deaminase
Ahae11616_RS12520	COG2081	HI0933 family
Ahae11616_RS12525	COG0668	transmembrane transport
Ahae11616_RS12545	COG0583	DNA-binding transcription factor activity
Ahae11616_RS12580	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Ahae11616_RS12585	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
Ahae11616_RS12590	COG0713	ATP synthesis coupled electron transport
Ahae11616_RS12600	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Ahae11616_RS12615	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
Ahae11616_RS12625	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Ahae11616_RS12625	COG0649	NAD binding
Ahae11616_RS12635	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Ahae11616_RS12660	COG2205	protein histidine kinase activity
Ahae11616_RS12665	COG0745	RESPONSE REGULATOR receiver
Ahae11616_RS12680	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
Ahae11616_RS12710	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
Ahae11616_RS12715	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
Ahae11616_RS12720	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
Ahae11616_RS12725	COG2076	Multidrug Resistance protein
Ahae11616_RS12745	COG2132	Multicopper oxidase
Ahae11616_RS12755	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
Ahae11616_RS12780	COG1968	undecaprenyl-diphosphatase activity
Ahae11616_RS12785	COG1214	PFAM Peptidase M22, glycoprotease
Ahae11616_RS12795	COG0494	nUDIX hydrolase
Ahae11616_RS12830	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
Ahae11616_RS12840	COG1595	DNA-templated transcription, initiation
Ahae11616_RS12845	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
Ahae11616_RS12850	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
Ahae11616_RS12915	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
Ahae11616_RS12925	COG1764	response to oxidative stress
Ahae11616_RS12950	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
Ahae11616_RS12950	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
Ahae11616_RS12965	COG0037	tRNA processing
Ahae11616_RS12975	COG0248	Ppx GppA phosphatase
Ahae11616_RS13000	COG0072	phenylalanine-tRNA ligase activity
Ahae11616_RS13020	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
Ahae11616_RS13030	COG1238	metal cluster binding
Ahae11616_RS13045	COG0625	glutathione transferase activity
Ahae11616_RS13065	COG0318	PFAM AMP-dependent synthetase and ligase
Ahae11616_RS13070	COG3028	Belongs to the UPF0307 family
Ahae11616_RS13095	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
Ahae11616_RS13100	COG0617	tRNA 3'-terminal CCA addition
Ahae11616_RS13105	COG1555	photosystem II stabilization
Ahae11616_RS13110	COG3956	TIGRFAM MazG family protein
Ahae11616_RS13140	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
Ahae11616_RS13160	COG5002	protein histidine kinase activity
Ahae11616_RS13160	COG0784	Response regulator, receiver
Ahae11616_RS13160	COG2205	protein histidine kinase activity
Ahae11616_RS13165	COG1024	Enoyl-CoA hydratase
Ahae11616_RS13170	COG2084	Dehydrogenase
Ahae11616_RS13175	COG3622	Belongs to the hyi family
Ahae11616_RS13195	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
Ahae11616_RS13200	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
Ahae11616_RS13205	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
Ahae11616_RS13210	COG0789	Transcriptional regulator
Ahae11616_RS13220	COG2814	Major facilitator Superfamily
Ahae11616_RS13225	COG5285	phytanoyl-CoA dioxygenase
Ahae11616_RS13235	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
Ahae11616_RS13240	COG0456	acetyltransferase
Ahae11616_RS13250	COG0431	NADPH-dependent FMN reductase
Ahae11616_RS13255	COG0798	PFAM Bile acid sodium symporter
Ahae11616_RS13265	COG0640	Transcriptional regulator
Ahae11616_RS13285	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
Ahae11616_RS13305	COG0732	type I restriction modification DNA specificity domain
Ahae11616_RS13315	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
Ahae11616_RS13405	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
Ahae11616_RS13415	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
Ahae11616_RS13430	COG0084	hydrolase, TatD family'
Ahae11616_RS13445	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
Ahae11616_RS13525	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
Ahae11616_RS13530	COG0440	acetolactate synthase activity
Ahae11616_RS13535	COG0028	Belongs to the TPP enzyme family
Ahae11616_RS13555	COG1466	dna polymerase III delta subunit
Ahae11616_RS13560	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Ahae11616_RS13565	COG0577	efflux transmembrane transporter activity
Ahae11616_RS13565	COG1136	(ABC) transporter
Ahae11616_RS13570	COG1538	Outer membrane efflux protein
Ahae11616_RS13585	COG2826	transposase and inactivated derivatives, IS30 family
Ahae11616_RS13615	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
Ahae11616_RS13620	COG1162	GTPase activity
Ahae11616_RS13630	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
Ahae11616_RS13655	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
Ahae11616_RS13665	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
Ahae11616_RS13675	COG3781	membrane
Ahae11616_RS13710	COG1666	GTP binding
Ahae11616_RS13725	COG1956	GAF domain-containing protein
Ahae11616_RS13730	COG1607	acyl-coa hydrolase
Ahae11616_RS13745	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
Ahae11616_RS13745	COG3453	Protein conserved in bacteria
Ahae11616_RS13785	COG1183	phosphatidylcholine synthase activity
Ahae11616_RS13790	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
Ahae11616_RS13820	COG1196	nuclear chromosome segregation
Ahae11616_RS13820	COG0739	heme binding
Ahae11616_RS13820	COG0741	lytic transglycosylase activity
Ahae11616_RS13830	COG1702	phosphate starvation-inducible protein PhoH
Ahae11616_RS13845	COG4773	Receptor
Ahae11616_RS13910	COG0788	formyltetrahydrofolate deformylase activity
Ahae11616_RS13925	COG0227	Belongs to the bacterial ribosomal protein bL28 family
Ahae11616_RS13930	COG0267	Belongs to the bacterial ribosomal protein bL33 family
Ahae11616_RS13935	COG4651	solute:proton antiporter activity
Ahae11616_RS13935	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
Ahae11616_RS13955	COG0210	DNA helicase
Ahae11616_RS13980	COG1733	regulation of RNA biosynthetic process
Ahae11616_RS14005	COG1560	Kdo2-lipid A biosynthetic process
Ahae11616_RS14055	COG0473	3-isopropylmalate dehydrogenase activity
Ahae11616_RS14090	COG0494	nUDIX hydrolase
Ahae11616_RS14125	COG0625	glutathione transferase activity
Ahae11616_RS14140	COG0564	pseudouridine synthase activity
Ahae11616_RS14150	COG1530	ribonuclease E activity
Ahae11616_RS14170	COG0635	Involved in the biosynthesis of porphyrin-containing compound
Ahae11616_RS14180	COG0534	Mate efflux family protein
Ahae11616_RS14185	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
Ahae11616_RS14210	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
Ahae11616_RS14235	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
Ahae11616_RS14275	COG1484	DNA-dependent DNA replication
Ahae11616_RS14335	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
Ahae11616_RS14350	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
Ahae11616_RS14360	COG0644	oxidoreductase
Ahae11616_RS14360	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
Ahae11616_RS14365	COG0425	Belongs to the sulfur carrier protein TusA family
Ahae11616_RS14370	COG4535	Mg2 and Co2 transporter CorC
Ahae11616_RS14375	COG0815	Transfers the fatty acyl group on membrane lipoproteins
Ahae11616_RS14395	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
Ahae11616_RS14405	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
Ahae11616_RS14420	COG0789	Transcriptional regulator
Ahae11616_RS14425	COG0598	Magnesium transport protein CorA
Ahae11616_RS14430	COG1185	polyribonucleotide nucleotidyltransferase activity
Ahae11616_RS14435	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
Ahae11616_RS14445	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
Ahae11616_RS14450	COG1074	ATP-dependent DNA helicase activity
Ahae11616_RS14455	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
Ahae11616_RS14515	COG1116	anion transmembrane transporter activity
Ahae11616_RS14520	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Ahae11616_RS14530	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
Ahae11616_RS14545	COG2111	Na H antiporter
Ahae11616_RS14545	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
Ahae11616_RS14550	COG1006	Multisubunit Na H antiporter MnhC subunit
Ahae11616_RS14555	COG0651	ATP synthesis coupled electron transport
Ahae11616_RS14565	COG2212	antiporter activity
Ahae11616_RS14590	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
Ahae11616_RS14600	COG0195	Participates in both transcription termination and antitermination
Ahae11616_RS14650	COG0237	dephospho-CoA kinase activity
Ahae11616_RS14660	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
Ahae11616_RS14670	COG0497	DNA recombination
Ahae11616_RS14680	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
Ahae11616_RS14705	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
Ahae11616_RS14755	COG1132	(ABC) transporter
Ahae11616_RS14765	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
Ahae11616_RS14780	COG0326	Molecular chaperone. Has ATPase activity
Ahae11616_RS14790	COG2056	Na+-H+ antiporter family
Ahae11616_RS14840	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
Ahae11616_RS14850	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
Ahae11616_RS14860	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
Ahae11616_RS14890	COG0546	phosphoglycolate phosphatase activity
Ahae11616_RS14895	COG1716	ATPase activity
Ahae11616_RS14940	COG0181	hydroxymethylbilane synthase activity
Ahae11616_RS14950	COG3275	phosphorelay sensor kinase activity
Ahae11616_RS14995	COG0494	nUDIX hydrolase
Ahae11616_RS15005	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
Ahae11616_RS15010	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
Ahae11616_RS15015	COG0772	Belongs to the SEDS family
Ahae11616_RS15045	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
Ahae11616_RS15055	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
Ahae11616_RS15060	COG1686	Belongs to the peptidase S11 family
Ahae11616_RS15065	COG2197	response regulator
Ahae11616_RS15080	COG0793	Belongs to the peptidase S41A family
Ahae11616_RS15085	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
Ahae11616_RS15090	COG0795	lipopolysaccharide-transporting ATPase activity
Ahae11616_RS15095	COG0795	lipopolysaccharide-transporting ATPase activity
Ahae11616_RS15130	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
Ahae11616_RS15130	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
Ahae11616_RS15135	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
Ahae11616_RS15140	COG0004	ammonium transporteR
Ahae11616_RS15145	COG0347	Belongs to the P(II) protein family
Ahae11616_RS15175	COG2015	COG2015, Alkyl sulfatase and related hydrolases
Ahae11616_RS15180	COG2826	transposase and inactivated derivatives, IS30 family
Ahae11616_RS15270	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Ahae11616_RS15275	COG1230	cation diffusion facilitator family transporter
Ahae11616_RS15285	COG0640	Transcriptional regulator
Ahae11616_RS15295	COG0789	Transcriptional regulator
Ahae11616_RS15325	COG2814	Major facilitator Superfamily
Ahae11616_RS15365	COG0633	Ferredoxin
Ahae11616_RS15410	COG0606	chelatase, subunit chli
Ahae11616_RS15445	COG0318	PFAM AMP-dependent synthetase and ligase
Ahae11616_RS15460	COG2860	membrane
Ahae11616_RS15470	COG1253	flavin adenine dinucleotide binding
Ahae11616_RS15485	COG2814	Major facilitator Superfamily
Ahae11616_RS15495	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
Ahae11616_RS15520	COG2814	Major facilitator Superfamily
Ahae11616_RS15530	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
Ahae11616_RS15535	COG1283	sodium-dependent phosphate transmembrane transporter activity
Ahae11616_RS15565	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
Ahae11616_RS15580	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
Ahae11616_RS15585	COG3162	membrane
Ahae11616_RS15590	COG2205	protein histidine kinase activity
Ahae11616_RS15625	COG1652	LysM domain
Ahae11616_RS15630	COG0758	DNA mediated transformation
Ahae11616_RS15645	COG1309	transcriptional regulator
Ahae11616_RS15655	COG2814	Major facilitator Superfamily
Ahae11616_RS15665	COG0386	Belongs to the glutathione peroxidase family
Ahae11616_RS15680	COG3328	transposase activity
Ahae11616_RS15695	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
Ahae11616_RS15705	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
Ahae11616_RS15745	COG1121	(ABC) transporter
Ahae11616_RS15750	COG1108	ABC-type Mn2 Zn2 transport systems permease components
Ahae11616_RS15755	COG1280	lysine exporter protein (LysE YggA)
Ahae11616_RS15760	COG2837	iron assimilation
Ahae11616_RS15795	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
Ahae11616_RS15800	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
Ahae11616_RS15815	COG0518	GMP synthase (glutamine-hydrolyzing) activity
Ahae11616_RS15815	COG0519	Catalyzes the synthesis of GMP from XMP
Ahae11616_RS15820	COG4399	Belongs to the UPF0754 family
Ahae11616_RS15830	COG2259	Doxx family
Ahae11616_RS15835	COG0586	Pfam SNARE associated Golgi protein
Ahae11616_RS15850	COG1192	Involved in chromosome partitioning
Ahae11616_RS15860	COG0271	Belongs to the BolA IbaG family
Ahae11616_RS15895	COG3756	Protein conserved in bacteria
Ahae11616_RS15925	COG1283	sodium-dependent phosphate transmembrane transporter activity
Ahae11616_RS15930	COG0842	Transport permease protein
Ahae11616_RS15935	COG1129	ABC transporter
Ahae11616_RS15935	COG0842	Transport permease protein
Ahae11616_RS15940	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Ahae11616_RS15990	COG3550	peptidyl-serine autophosphorylation
Ahae11616_RS16055	COG0735	belongs to the Fur family
Ahae11616_RS16115	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
Ahae11616_RS16125	COG4115	mRNA cleavage
Ahae11616_RS16140	COG0477	Major facilitator Superfamily
Ahae11616_RS16145	COG1024	Enoyl-CoA hydratase
Ahae11616_RS16150	COG1024	Enoyl-CoA hydratase
Ahae11616_RS16155	COG1960	acyl-CoA dehydrogenase activity
Ahae11616_RS16160	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
Ahae11616_RS16180	COG1113	amino acid transport
Ahae11616_RS16185	COG0251	oxidation-reduction process
Ahae11616_RS16200	COG1522	sequence-specific DNA binding
Ahae11616_RS16220	COG0456	acetyltransferase
Ahae11616_RS16230	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
Ahae11616_RS16255	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
Ahae11616_RS16270	COG1802	Transcriptional regulator
Ahae11616_RS16275	COG4372	Transposase
Ahae11616_RS16285	COG2963	transposase activity
Ahae11616_RS16290	COG1448	Aminotransferase
Ahae11616_RS16295	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
Ahae11616_RS16300	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
Ahae11616_RS16315	COG1210	Utp--glucose-1-phosphate uridylyltransferase
Ahae11616_RS16325	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
Ahae11616_RS16335	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
Ahae11616_RS16345	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
Ahae11616_RS16355	COG1086	Polysaccharide biosynthesis protein
Ahae11616_RS16365	COG0463	Glycosyl transferase, family 2
Ahae11616_RS16385	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
Ahae11616_RS16425	COG3023	N-Acetylmuramoyl-L-alanine amidase
Ahae11616_RS16475	COG0546	phosphoglycolate phosphatase activity
Ahae11616_RS16480	COG1028	Short-chain dehydrogenase reductase Sdr
Ahae11616_RS16490	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
Ahae11616_RS16490	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
Ahae11616_RS16495	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
Ahae11616_RS16500	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
Ahae11616_RS16505	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Ahae11616_RS16510	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
Ahae11616_RS16515	COG1116	anion transmembrane transporter activity
Ahae11616_RS16520	COG1309	transcriptional regulator
Ahae11616_RS16530	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
Ahae11616_RS16540	COG0196	riboflavin kinase activity
Ahae11616_RS16545	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
Ahae11616_RS16555	COG1047	Peptidyl-prolyl cis-trans
Ahae11616_RS16595	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
Ahae11616_RS16620	COG0583	DNA-binding transcription factor activity
Ahae11616_RS16630	COG0443	Heat shock 70 kDa protein
Ahae11616_RS16635	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
Ahae11616_RS16660	COG2951	lytic endotransglycosylase activity
Ahae11616_RS16665	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
Ahae11616_RS16685	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
Ahae11616_RS16705	COG1960	acyl-CoA dehydrogenase activity
Ahae11616_RS16715	COG0861	Integral membrane protein TerC family
Ahae11616_RS16725	COG0402	S-adenosylhomocysteine deaminase activity
Ahae11616_RS16740	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
Ahae11616_RS16750	COG0706	membrane insertase activity
Ahae11616_RS16765	COG0230	Belongs to the bacterial ribosomal protein bL34 family
Ahae11616_RS16790	COG3316	Transposase and inactivated derivatives
Ahae11616_RS16795	COG1063	alcohol dehydrogenase
Ahae11616_RS16800	COG4716	Myosin-crossreactive antigen
Ahae11616_RS16845	COG1373	ATPase (AAA superfamily
Ahae11616_RS16850	COG4680	protein conserved in bacteria
Ahae11616_RS16860	COG3316	Transposase and inactivated derivatives
Ahae11616_RS16880	COG0402	S-adenosylhomocysteine deaminase activity
Ahae11616_RS16890	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
Ahae11616_RS16940	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
Ahae11616_RS16945	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
Ahae11616_RS16975	COG4680	protein conserved in bacteria
Ahae11616_RS16990	COG1063	alcohol dehydrogenase
Ahae11616_RS17005	COG2323	membrane
Ahae11616_RS17050	COG2223	nitrite transmembrane transporter activity
Ahae11616_RS17055	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
Ahae11616_RS17060	COG1877	trehalose-phosphatase activity
Ahae11616_RS17080	COG1570	exodeoxyribonuclease VII activity
Ahae11616_RS17100	COG0582	viral genome integration into host DNA
Ahae11616_RS17145	COG2801	Transposase and inactivated derivatives
Ahae11616_RS17155	COG3316	Transposase and inactivated derivatives
Ahae11616_RS17195	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP