locus-tag	class	description
AhaeAN3_RS00010	COG0592	DNA-directed DNA polymerase activity
AhaeAN3_RS00020	COG0187	DNA topoisomerase II activity
AhaeAN3_RS00025	COG0586	Pfam SNARE associated Golgi protein
AhaeAN3_RS00030	COG0488	(ABC) transporter
AhaeAN3_RS00060	COG0596	Alpha beta hydrolase
AhaeAN3_RS00065	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
AhaeAN3_RS00070	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
AhaeAN3_RS00110	COG0471	metal ion transport
AhaeAN3_RS00110	COG3273	potassium ion transport
AhaeAN3_RS00120	COG1012	belongs to the aldehyde dehydrogenase family
AhaeAN3_RS00125	COG3738	Protein conserved in bacteria
AhaeAN3_RS00130	COG0733	neurotransmitter:sodium symporter activity
AhaeAN3_RS00170	COG2233	PERMEase
AhaeAN3_RS00185	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AhaeAN3_RS00200	COG0484	heat shock protein binding
AhaeAN3_RS00215	COG2814	Major facilitator Superfamily
AhaeAN3_RS00220	COG0656	L-ascorbic acid biosynthetic process
AhaeAN3_RS00225	COG0583	DNA-binding transcription factor activity
AhaeAN3_RS00240	COG1064	alcohol dehydrogenase
AhaeAN3_RS00245	COG2818	Glycosylase
AhaeAN3_RS00260	COG1194	a g-specific adenine glycosylase
AhaeAN3_RS00270	COG5487	UPF0391 membrane protein
AhaeAN3_RS00275	COG2983	Belongs to the UPF0260 family
AhaeAN3_RS00280	COG2133	pyrroloquinoline quinone binding
AhaeAN3_RS00290	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
AhaeAN3_RS00300	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
AhaeAN3_RS00310	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AhaeAN3_RS00315	COG1335	isochorismatase
AhaeAN3_RS00320	COG1522	sequence-specific DNA binding
AhaeAN3_RS00330	COG3328	transposase activity
AhaeAN3_RS00340	COG1230	cation diffusion facilitator family transporter
AhaeAN3_RS00360	COG2217	Heavy metal translocating P-type atpase
AhaeAN3_RS00365	COG2205	protein histidine kinase activity
AhaeAN3_RS00380	COG2132	Multicopper oxidase
AhaeAN3_RS00410	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
AhaeAN3_RS00420	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
AhaeAN3_RS00425	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
AhaeAN3_RS00430	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
AhaeAN3_RS00450	COG3830	Belongs to the UPF0237 family
AhaeAN3_RS00450	COG0560	Phosphoserine phosphatase
AhaeAN3_RS00540	COG0534	Mate efflux family protein
AhaeAN3_RS00545	COG0436	Aminotransferase
AhaeAN3_RS00555	COG2733	membrane
AhaeAN3_RS00570	COG2918	glutathione biosynthetic process
AhaeAN3_RS00585	COG3150	esterase
AhaeAN3_RS00600	COG0559	Belongs to the binding-protein-dependent transport system permease family
AhaeAN3_RS00615	COG0410	ABC transporter
AhaeAN3_RS00625	COG1247	-acetyltransferase
AhaeAN3_RS00655	COG0625	glutathione transferase activity
AhaeAN3_RS00675	COG1393	Belongs to the ArsC family
AhaeAN3_RS00680	COG0708	Exodeoxyribonuclease III
AhaeAN3_RS00705	COG0300	oxidoreductase activity
AhaeAN3_RS00745	COG0386	Belongs to the glutathione peroxidase family
AhaeAN3_RS00750	COG0189	ligase activity
AhaeAN3_RS00770	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
AhaeAN3_RS00780	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
AhaeAN3_RS00815	COG2119	membrane
AhaeAN3_RS00820	COG4774	siderophore transport
AhaeAN3_RS00825	COG0426	domain, Protein
AhaeAN3_RS00825	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
AhaeAN3_RS00850	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
AhaeAN3_RS00875	COG1902	pentaerythritol trinitrate reductase activity
AhaeAN3_RS00880	COG1519	Transferase
AhaeAN3_RS00885	COG1385	rRNA (uridine-N3-)-methyltransferase activity
AhaeAN3_RS00890	COG0668	transmembrane transport
AhaeAN3_RS00895	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AhaeAN3_RS00925	COG3706	GGDEF domain
AhaeAN3_RS00950	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
AhaeAN3_RS00950	COG0351	phosphomethylpyrimidine kinase
AhaeAN3_RS00950	COG0352	thiamine-phosphate diphosphorylase activity
AhaeAN3_RS00960	COG2814	Major facilitator Superfamily
AhaeAN3_RS00985	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
AhaeAN3_RS00990	COG1012	belongs to the aldehyde dehydrogenase family
AhaeAN3_RS01000	COG3349	Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'
AhaeAN3_RS01030	COG3158	transport of potassium into the cell
AhaeAN3_RS01070	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
AhaeAN3_RS01095	COG0659	secondary active sulfate transmembrane transporter activity
AhaeAN3_RS01110	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
AhaeAN3_RS01145	COG0427	acetyl-CoA hydrolase
AhaeAN3_RS01150	COG2205	protein histidine kinase activity
AhaeAN3_RS01155	COG0745	RESPONSE REGULATOR receiver
AhaeAN3_RS01185	COG0583	DNA-binding transcription factor activity
AhaeAN3_RS01195	COG0789	Transcriptional regulator
AhaeAN3_RS01200	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AhaeAN3_RS01200	COG3320	Male sterility
AhaeAN3_RS01205	COG4221	oxidoreductase activity
AhaeAN3_RS01215	COG0488	(ABC) transporter
AhaeAN3_RS01285	COG0833	amino acid
AhaeAN3_RS01325	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
AhaeAN3_RS01330	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
AhaeAN3_RS01335	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
AhaeAN3_RS01340	COG2226	methyltransferase
AhaeAN3_RS01390	COG0069	glutamate synthase activity
AhaeAN3_RS01390	COG0067	glutamate synthase
AhaeAN3_RS01390	COG0070	glutamate synthase
AhaeAN3_RS01395	COG0493	'glutamate synthase
AhaeAN3_RS01415	COG1704	LemA family
AhaeAN3_RS01420	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
AhaeAN3_RS01445	COG4969	Belongs to the N-Me-Phe pilin family
AhaeAN3_RS01465	COG4636	protein conserved in cyanobacteria
AhaeAN3_RS01470	COG3307	-O-antigen
AhaeAN3_RS01480	COG2906	2 iron, 2 sulfur cluster binding
AhaeAN3_RS01490	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
AhaeAN3_RS01500	COG0194	GDP metabolic process
AhaeAN3_RS01505	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
AhaeAN3_RS01510	COG4969	Belongs to the N-Me-Phe pilin family
AhaeAN3_RS01580	COG0228	four-way junction DNA binding
AhaeAN3_RS01585	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
AhaeAN3_RS01595	COG0335	large ribosomal subunit rRNA binding
AhaeAN3_RS01605	COG5380	lipid catabolic process
AhaeAN3_RS01610	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
AhaeAN3_RS01640	COG0741	lytic transglycosylase activity
AhaeAN3_RS01640	COG0739	heme binding
AhaeAN3_RS01640	COG1196	nuclear chromosome segregation
AhaeAN3_RS01645	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
AhaeAN3_RS01650	COG0277	FAD linked oxidase domain protein
AhaeAN3_RS01665	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
AhaeAN3_RS01670	COG2249	NAD(P)H dehydrogenase (quinone) activity
AhaeAN3_RS01685	COG1289	transmembrane transporter activity
AhaeAN3_RS01690	COG0628	permease
AhaeAN3_RS01695	COG1192	Involved in chromosome partitioning
AhaeAN3_RS01705	COG2226	methyltransferase
AhaeAN3_RS01750	COG2072	flavoprotein involved in K transport
AhaeAN3_RS01795	COG0471	metal ion transport
AhaeAN3_RS01805	COG1983	PspC domain protein
AhaeAN3_RS01815	COG1960	acyl-CoA dehydrogenase activity
AhaeAN3_RS01875	COG1127	ABC transporter
AhaeAN3_RS01880	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
AhaeAN3_RS01885	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
AhaeAN3_RS01890	COG2854	intermembrane phospholipid transfer
AhaeAN3_RS01905	COG0598	Magnesium transport protein CorA
AhaeAN3_RS01920	COG1040	competence protein
AhaeAN3_RS01925	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
AhaeAN3_RS01940	COG2937	Belongs to the GPAT DAPAT family
AhaeAN3_RS01945	COG1946	Acyl-CoA thioesterase
AhaeAN3_RS01950	COG1301	dicarboxylic acid transport
AhaeAN3_RS01975	COG1017	nitric oxide dioxygenase activity
AhaeAN3_RS01975	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AhaeAN3_RS01980	COG0433	COG0433 Predicted ATPase
AhaeAN3_RS02000	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
AhaeAN3_RS02020	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
AhaeAN3_RS02070	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
AhaeAN3_RS02105	COG0257	Belongs to the bacterial ribosomal protein bL36 family
AhaeAN3_RS02115	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
AhaeAN3_RS02130	COG0203	ribosomal protein L17
AhaeAN3_RS02150	COG1960	acyl-CoA dehydrogenase activity
AhaeAN3_RS02155	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
AhaeAN3_RS02180	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
AhaeAN3_RS02210	COG0339	signal peptide processing
AhaeAN3_RS02215	COG0557	exoribonuclease II activity
AhaeAN3_RS02260	COG0179	Fumarylacetoacetate (FAA) hydrolase
AhaeAN3_RS02265	COG2207	Transcriptional regulator
AhaeAN3_RS02275	COG1295	ribonuclease BN
AhaeAN3_RS02315	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
AhaeAN3_RS02350	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
AhaeAN3_RS02350	COG2813	Specifically methylates the guanine in position
AhaeAN3_RS02360	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
AhaeAN3_RS02370	COG3128	pkhd-type hydroxylase
AhaeAN3_RS02375	COG4774	siderophore transport
AhaeAN3_RS02380	COG4771	TonB-dependent receptor
AhaeAN3_RS02390	COG0740	serine-type endopeptidase activity
AhaeAN3_RS02410	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
AhaeAN3_RS02410	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
AhaeAN3_RS02415	COG1917	Cupin 2, conserved barrel domain protein
AhaeAN3_RS02415	COG2207	Transcriptional regulator
AhaeAN3_RS02420	COG0697	spore germination
AhaeAN3_RS02430	COG0857	belongs to the CobB CobQ family
AhaeAN3_RS02430	COG0280	phosphate acetyltransferase
AhaeAN3_RS02435	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
AhaeAN3_RS02460	COG0793	Belongs to the peptidase S41A family
AhaeAN3_RS02480	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
AhaeAN3_RS02490	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AhaeAN3_RS02495	COG1408	metallophosphoesterase
AhaeAN3_RS02505	COG2199	diguanylate cyclase activity
AhaeAN3_RS02545	COG1960	acyl-CoA dehydrogenase activity
AhaeAN3_RS02560	COG1309	transcriptional regulator
AhaeAN3_RS02575	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
AhaeAN3_RS02580	COG1960	acyl-CoA dehydrogenase activity
AhaeAN3_RS02635	COG2969	positive regulation of protein catabolic process
AhaeAN3_RS02640	COG0625	glutathione transferase activity
AhaeAN3_RS02645	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
AhaeAN3_RS02650	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
AhaeAN3_RS02660	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
AhaeAN3_RS02665	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
AhaeAN3_RS02670	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
AhaeAN3_RS02685	COG2975	iron-sulfur cluster assembly
AhaeAN3_RS02705	COG1426	Protein conserved in bacteria
AhaeAN3_RS02740	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
AhaeAN3_RS02750	COG1862	Preprotein translocase
AhaeAN3_RS02780	COG5002	protein histidine kinase activity
AhaeAN3_RS02785	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
AhaeAN3_RS02795	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
AhaeAN3_RS02850	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
AhaeAN3_RS02890	COG1960	acyl-CoA dehydrogenase activity
AhaeAN3_RS02895	COG1960	acyl-CoA dehydrogenase activity
AhaeAN3_RS02905	COG2205	protein histidine kinase activity
AhaeAN3_RS02910	COG0745	RESPONSE REGULATOR receiver
AhaeAN3_RS02945	COG2096	Adenosyltransferase
AhaeAN3_RS02950	COG4206	TonB-dependent receptor
AhaeAN3_RS02960	COG0133	tryptophan synthase activity
AhaeAN3_RS02975	COG3501	Rhs element vgr protein
AhaeAN3_RS03025	COG0285	dihydrofolate synthase activity
AhaeAN3_RS03040	COG0450	alkyl hydroperoxide reductase
AhaeAN3_RS03060	COG0477	Major facilitator Superfamily
AhaeAN3_RS03065	COG1272	protein, Hemolysin III
AhaeAN3_RS03100	COG0183	Belongs to the thiolase family
AhaeAN3_RS03110	COG2207	Transcriptional regulator
AhaeAN3_RS03115	COG1804	L-carnitine dehydratase bile acid-inducible protein F
AhaeAN3_RS03130	COG3501	Rhs element vgr protein
AhaeAN3_RS03140	COG0739	heme binding
AhaeAN3_RS03145	COG2826	transposase and inactivated derivatives, IS30 family
AhaeAN3_RS03170	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AhaeAN3_RS03185	COG0183	Belongs to the thiolase family
AhaeAN3_RS03195	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
AhaeAN3_RS03195	COG2885	chlorophyll binding
AhaeAN3_RS03205	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
AhaeAN3_RS03205	COG2885	chlorophyll binding
AhaeAN3_RS03210	COG1690	Belongs to the RtcB family
AhaeAN3_RS03215	COG0833	amino acid
AhaeAN3_RS03225	COG2233	PERMEase
AhaeAN3_RS03235	COG1970	mechanosensitive ion channel activity
AhaeAN3_RS03255	COG4772	TonB-dependent receptor
AhaeAN3_RS03265	COG0354	folic acid binding
AhaeAN3_RS03275	COG2824	Alkylphosphonate utilization operon protein PhnA
AhaeAN3_RS03280	COG3422	double-strand break repair
AhaeAN3_RS03310	COG0840	transmembrane signaling receptor activity
AhaeAN3_RS03315	COG0643	Histidine kinase
AhaeAN3_RS03315	COG2198	Histidine kinase
AhaeAN3_RS03315	COG0643	Histidine kinase
AhaeAN3_RS03315	COG2198	Histidine kinase
AhaeAN3_RS03330	COG5510	response to toxic substance
AhaeAN3_RS03340	COG2832	Protein of unknown function (DUF454)
AhaeAN3_RS03345	COG1376	ErfK ybiS ycfS ynhG family protein
AhaeAN3_RS03400	COG1289	transmembrane transporter activity
AhaeAN3_RS03405	COG2814	Major facilitator Superfamily
AhaeAN3_RS03420	COG0786	glutamate:sodium symporter activity
AhaeAN3_RS03425	COG1115	amino acid carrier protein
AhaeAN3_RS03430	COG1752	Esterase of the alpha-beta hydrolase superfamily
AhaeAN3_RS03435	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
AhaeAN3_RS03485	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
AhaeAN3_RS03495	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
AhaeAN3_RS03500	COG1077	Cell shape determining protein MreB Mrl
AhaeAN3_RS03505	COG1792	Involved in formation and maintenance of cell shape
AhaeAN3_RS03515	COG0424	maF-like protein
AhaeAN3_RS03520	COG1530	ribonuclease E activity
AhaeAN3_RS03530	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AhaeAN3_RS03540	COG0560	Phosphoserine phosphatase
AhaeAN3_RS03560	COG2851	Citrate transporter
AhaeAN3_RS03565	COG0671	phosphoesterase, PA-phosphatase related
AhaeAN3_RS03590	COG1113	amino acid transport
AhaeAN3_RS03595	COG2828	Protein conserved in bacteria
AhaeAN3_RS03600	COG0142	geranyltranstransferase activity
AhaeAN3_RS03615	COG1752	Esterase of the alpha-beta hydrolase superfamily
AhaeAN3_RS03635	COG2194	sulfuric ester hydrolase activity
AhaeAN3_RS03640	COG0745	RESPONSE REGULATOR receiver
AhaeAN3_RS03645	COG0642	Histidine kinase
AhaeAN3_RS03655	COG1126	abc transporter atp-binding protein
AhaeAN3_RS03660	COG0765	amino acid transport
AhaeAN3_RS03665	COG0765	amino acid transport
AhaeAN3_RS03675	COG0004	ammonium transporteR
AhaeAN3_RS03700	COG0525	valine-tRNA ligase activity
AhaeAN3_RS03740	COG0393	Putative heavy-metal-binding
AhaeAN3_RS03745	COG1538	Outer membrane efflux protein
AhaeAN3_RS03755	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AhaeAN3_RS03760	COG0671	phosphoesterase, PA-phosphatase related
AhaeAN3_RS03790	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
AhaeAN3_RS03805	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
AhaeAN3_RS03805	COG1648	precorrin-2 dehydrogenase activity
AhaeAN3_RS03810	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
AhaeAN3_RS03820	COG1733	regulation of RNA biosynthetic process
AhaeAN3_RS03830	COG0531	amino acid
AhaeAN3_RS03845	COG0321	lipoyl(octanoyl) transferase activity
AhaeAN3_RS03875	COG1280	lysine exporter protein (LysE YggA)
AhaeAN3_RS03880	COG0583	DNA-binding transcription factor activity
AhaeAN3_RS03885	COG0500	methyltransferase
AhaeAN3_RS03890	COG0586	Pfam SNARE associated Golgi protein
AhaeAN3_RS03910	COG2009	succinate dehydrogenase
AhaeAN3_RS03915	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
AhaeAN3_RS03920	COG1053	succinate dehydrogenase
AhaeAN3_RS03925	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
AhaeAN3_RS03945	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AhaeAN3_RS03960	COG2268	Band 7 protein
AhaeAN3_RS03965	COG1585	Membrane protein implicated in regulation of membrane protease activity
AhaeAN3_RS03975	COG2354	Protein conserved in bacteria
AhaeAN3_RS03980	COG2321	neutral zinc metallopeptidase
AhaeAN3_RS04000	COG0110	maltose O-acetyltransferase activity
AhaeAN3_RS04020	COG0505	Belongs to the CarA family
AhaeAN3_RS04045	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
AhaeAN3_RS04060	COG2304	oxidoreductase activity
AhaeAN3_RS04085	COG0584	glycerophosphoryl diester phosphodiesterase
AhaeAN3_RS04090	COG2194	sulfuric ester hydrolase activity
AhaeAN3_RS04095	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AhaeAN3_RS04100	COG2239	Acts as a magnesium transporter
AhaeAN3_RS04110	COG0501	Belongs to the peptidase M48B family
AhaeAN3_RS04115	COG1196	nuclear chromosome segregation
AhaeAN3_RS04115	COG0739	heme binding
AhaeAN3_RS04115	COG0741	lytic transglycosylase activity
AhaeAN3_RS04130	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
AhaeAN3_RS04135	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
AhaeAN3_RS04165	COG0725	ABC transporter, periplasmic molybdate-binding protein
AhaeAN3_RS04170	COG4149	molybdate abc transporter
AhaeAN3_RS04190	COG4521	taurine ABC transporter
AhaeAN3_RS04195	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
AhaeAN3_RS04200	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AhaeAN3_RS04205	COG2175	clavaminate synthase activity
AhaeAN3_RS04230	COG0589	response to stress
AhaeAN3_RS04245	COG0242	peptide deformylase activity
AhaeAN3_RS04250	COG2852	Protein conserved in bacteria
AhaeAN3_RS04270	COG0306	phosphate transporter
AhaeAN3_RS04295	COG1115	amino acid carrier protein
AhaeAN3_RS04305	COG0019	diaminopimelate decarboxylase activity
AhaeAN3_RS04310	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
AhaeAN3_RS04320	COG1280	lysine exporter protein (LysE YggA)
AhaeAN3_RS04325	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
AhaeAN3_RS04360	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AhaeAN3_RS04385	COG1671	Belongs to the UPF0178 family
AhaeAN3_RS04400	COG4591	ABC-type transport system involved in lipoprotein release permease component
AhaeAN3_RS04405	COG1136	(ABC) transporter
AhaeAN3_RS04410	COG2333	competence protein COMEC
AhaeAN3_RS04410	COG0658	competence protein
AhaeAN3_RS04420	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
AhaeAN3_RS04420	COG0616	signal peptide processing
AhaeAN3_RS04430	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
AhaeAN3_RS04440	COG0628	permease
AhaeAN3_RS04475	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AhaeAN3_RS04495	COG0823	Involved in the tonB-independent uptake of proteins
AhaeAN3_RS04515	COG0824	Thioesterase
AhaeAN3_RS04525	COG2255	four-way junction helicase activity
AhaeAN3_RS04540	COG0047	phosphoribosylformylglycinamidine synthase activity
AhaeAN3_RS04540	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
AhaeAN3_RS04560	COG3323	Protein of unknown function (DUF1653)
AhaeAN3_RS04560	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
AhaeAN3_RS04565	COG0778	Nitroreductase
AhaeAN3_RS04570	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
AhaeAN3_RS04570	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AhaeAN3_RS04570	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AhaeAN3_RS04575	COG1105	Belongs to the carbohydrate kinase PfkB family
AhaeAN3_RS04580	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AhaeAN3_RS04580	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
AhaeAN3_RS04585	COG1024	Enoyl-CoA hydratase
AhaeAN3_RS04590	COG1056	cytidyltransferase-related domain
AhaeAN3_RS04590	COG1051	belongs to the nudix hydrolase family
AhaeAN3_RS04595	COG0583	DNA-binding transcription factor activity
AhaeAN3_RS04600	COG1942	4-Oxalocrotonate Tautomerase
AhaeAN3_RS04620	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
AhaeAN3_RS04635	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
AhaeAN3_RS04640	COG0602	queuosine metabolic process
AhaeAN3_RS04655	COG0583	DNA-binding transcription factor activity
AhaeAN3_RS04660	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
AhaeAN3_RS04665	COG4208	sulfate ABC transporter
AhaeAN3_RS04670	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
AhaeAN3_RS04680	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
AhaeAN3_RS04685	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AhaeAN3_RS04690	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
AhaeAN3_RS04740	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AhaeAN3_RS04750	COG0481	GTPase activity
AhaeAN3_RS04765	COG0571	ribonuclease III activity
AhaeAN3_RS04770	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
AhaeAN3_RS04785	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
AhaeAN3_RS04830	COG0556	nucleotide-excision repair
AhaeAN3_RS04875	COG1840	ABC-type Fe3 transport system, periplasmic component
AhaeAN3_RS04880	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
AhaeAN3_RS04900	COG0583	DNA-binding transcription factor activity
AhaeAN3_RS04905	COG0596	Alpha beta hydrolase
AhaeAN3_RS04910	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AhaeAN3_RS04915	COG1773	rubredoxin
AhaeAN3_RS04925	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
AhaeAN3_RS04935	COG0175	sulfate reduction
AhaeAN3_RS04950	COG0222	ribosome binding
AhaeAN3_RS04955	COG1253	flavin adenine dinucleotide binding
AhaeAN3_RS04970	COG3015	lipoprotein NlpE involved in copper resistance
AhaeAN3_RS04985	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
AhaeAN3_RS04985	COG0517	IMP dehydrogenase activity
AhaeAN3_RS04990	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
AhaeAN3_RS05000	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
AhaeAN3_RS05005	COG1137	ATPase activity
AhaeAN3_RS05015	COG3676	manually curated
AhaeAN3_RS05060	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
AhaeAN3_RS05095	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
AhaeAN3_RS05120	COG0204	Acyl-transferase
AhaeAN3_RS05125	COG4783	chaperone-mediated protein folding
AhaeAN3_RS05145	COG1610	YqeY-like protein
AhaeAN3_RS05150	COG0828	Belongs to the bacterial ribosomal protein bS21 family
AhaeAN3_RS05210	COG1414	Transcriptional regulator
AhaeAN3_RS05215	COG2146	nitrite reductase [NAD(P)H] activity
AhaeAN3_RS05230	COG1028	Short-chain dehydrogenase reductase Sdr
AhaeAN3_RS05240	COG0446	pyridine nucleotide-disulphide oxidoreductase
AhaeAN3_RS05245	COG2271	Major facilitator Superfamily
AhaeAN3_RS05260	COG1028	Short-chain dehydrogenase reductase Sdr
AhaeAN3_RS05275	COG0028	Belongs to the TPP enzyme family
AhaeAN3_RS05295	COG0482	sulfurtransferase activity
AhaeAN3_RS05310	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
AhaeAN3_RS05315	COG1686	Belongs to the peptidase S11 family
AhaeAN3_RS05335	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
AhaeAN3_RS05345	COG0583	DNA-binding transcription factor activity
AhaeAN3_RS05350	COG1067	ATP-dependent peptidase activity
AhaeAN3_RS05370	COG0254	rRNA binding
AhaeAN3_RS05390	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
AhaeAN3_RS05395	COG1966	Carbon starvation protein
AhaeAN3_RS05400	COG2879	small protein
AhaeAN3_RS05405	COG0714	Associated with various cellular activities
AhaeAN3_RS05435	COG1741	Belongs to the pirin family
AhaeAN3_RS05450	COG0446	pyridine nucleotide-disulphide oxidoreductase
AhaeAN3_RS05450	COG1902	pentaerythritol trinitrate reductase activity
AhaeAN3_RS05460	COG0582	viral genome integration into host DNA
AhaeAN3_RS05545	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
AhaeAN3_RS05550	COG0569	domain protein
AhaeAN3_RS05555	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
AhaeAN3_RS05560	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
AhaeAN3_RS05565	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
AhaeAN3_RS05570	COG2205	protein histidine kinase activity
AhaeAN3_RS05575	COG0745	RESPONSE REGULATOR receiver
AhaeAN3_RS05580	COG0174	glutamine synthetase
AhaeAN3_RS05665	COG0582	viral genome integration into host DNA
AhaeAN3_RS05690	COG2995	paraquat-inducible protein a
AhaeAN3_RS05695	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
AhaeAN3_RS05695	COG3008	intermembrane lipid transfer
AhaeAN3_RS05730	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
AhaeAN3_RS05740	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
AhaeAN3_RS05745	COG1469	GTP cyclohydrolase I activity
AhaeAN3_RS05760	COG0523	cobalamin synthesis protein
AhaeAN3_RS05765	COG1414	Transcriptional regulator
AhaeAN3_RS05770	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
AhaeAN3_RS05775	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
AhaeAN3_RS05780	COG0183	Belongs to the thiolase family
AhaeAN3_RS05785	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
AhaeAN3_RS05790	COG0596	Alpha beta hydrolase
AhaeAN3_RS05795	COG2271	Major facilitator Superfamily
AhaeAN3_RS05800	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AhaeAN3_RS05805	COG3485	protocatechuate 3,4-dioxygenase
AhaeAN3_RS05810	COG3485	protocatechuate 3,4-dioxygenase
AhaeAN3_RS05815	COG0710	3-dehydroquinate dehydratase activity
AhaeAN3_RS05820	COG3420	alginic acid biosynthetic process
AhaeAN3_RS05825	COG3659	wide pore channel activity
AhaeAN3_RS05830	COG4993	Dehydrogenase
AhaeAN3_RS05840	COG2351	hydroxyisourate hydrolase activity
AhaeAN3_RS05845	COG2233	PERMEase
AhaeAN3_RS05865	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AhaeAN3_RS05870	COG2186	Transcriptional regulator
AhaeAN3_RS05875	COG4266	Belongs to the allantoicase family
AhaeAN3_RS05890	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AhaeAN3_RS05900	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AhaeAN3_RS05915	COG0583	DNA-binding transcription factor activity
AhaeAN3_RS05925	COG2188	Transcriptional regulator
AhaeAN3_RS05945	COG0010	Belongs to the arginase family
AhaeAN3_RS05950	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
AhaeAN3_RS05955	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AhaeAN3_RS05990	COG0243	molybdopterin cofactor binding
AhaeAN3_RS05995	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
AhaeAN3_RS06000	COG2837	iron assimilation
AhaeAN3_RS06030	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
AhaeAN3_RS06040	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
AhaeAN3_RS06075	COG1309	transcriptional regulator
AhaeAN3_RS06095	COG2072	flavoprotein involved in K transport
AhaeAN3_RS06100	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
AhaeAN3_RS06105	COG1560	Kdo2-lipid A biosynthetic process
AhaeAN3_RS06110	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
AhaeAN3_RS06115	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
AhaeAN3_RS06120	COG4770	biotin carboxylase activity
AhaeAN3_RS06125	COG0501	Belongs to the peptidase M48B family
AhaeAN3_RS06135	COG1765	OsmC-like protein
AhaeAN3_RS06185	COG4133	protoheme IX ABC transporter activity
AhaeAN3_RS06215	COG0308	aminopeptidase N
AhaeAN3_RS06220	COG1760	l-serine dehydratase
AhaeAN3_RS06230	COG1714	RDD family
AhaeAN3_RS06240	COG0475	glutathione-regulated potassium exporter activity
AhaeAN3_RS06240	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
AhaeAN3_RS06245	COG3135	benzoate transporter
AhaeAN3_RS06275	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
AhaeAN3_RS06310	COG0316	Belongs to the HesB IscA family
AhaeAN3_RS06315	COG0822	iron-sulfur transferase activity
AhaeAN3_RS06340	COG0776	regulation of translation
AhaeAN3_RS06345	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AhaeAN3_RS06360	COG2137	regulation of response to DNA damage stimulus
AhaeAN3_RS06370	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
AhaeAN3_RS06375	COG1011	Hydrolase
AhaeAN3_RS06380	COG1218	3'(2'),5'-bisphosphate nucleotidase
AhaeAN3_RS06400	COG0268	Binds directly to 16S ribosomal RNA
AhaeAN3_RS06405	COG0702	epimerase
AhaeAN3_RS06410	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
AhaeAN3_RS06425	COG0183	Belongs to the thiolase family
AhaeAN3_RS06470	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
AhaeAN3_RS06475	COG0583	DNA-binding transcription factor activity
AhaeAN3_RS06480	COG0424	maF-like protein
AhaeAN3_RS06580	COG3634	alkyl hydroperoxide reductase activity
AhaeAN3_RS06595	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
AhaeAN3_RS06600	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
AhaeAN3_RS06615	COG2353	YceI-like domain
AhaeAN3_RS06620	COG3153	acetyltransferase
AhaeAN3_RS06635	COG3698	Phosphodiester glycosidase
AhaeAN3_RS06645	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
AhaeAN3_RS06655	COG0506	proline dehydrogenase activity
AhaeAN3_RS06655	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
AhaeAN3_RS06655	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
AhaeAN3_RS06670	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AhaeAN3_RS06690	COG1132	(ABC) transporter
AhaeAN3_RS06705	COG0668	transmembrane transport
AhaeAN3_RS06710	COG3122	Protein conserved in bacteria
AhaeAN3_RS06730	COG0640	Transcriptional regulator
AhaeAN3_RS06755	COG2850	peptidyl-arginine hydroxylation
AhaeAN3_RS06770	COG1454	alcohol dehydrogenase
AhaeAN3_RS06775	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
AhaeAN3_RS06795	COG0069	glutamate synthase activity
AhaeAN3_RS06805	COG2814	Major facilitator Superfamily
AhaeAN3_RS06820	COG0439	Biotin carboxylase
AhaeAN3_RS06825	COG0511	ligase activity, forming carbon-carbon bonds
AhaeAN3_RS06835	COG1116	anion transmembrane transporter activity
AhaeAN3_RS06835	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AhaeAN3_RS06845	COG2223	nitrite transmembrane transporter activity
AhaeAN3_RS06850	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AhaeAN3_RS06850	COG2146	nitrite reductase [NAD(P)H] activity
AhaeAN3_RS06855	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AhaeAN3_RS06860	COG0243	molybdopterin cofactor binding
AhaeAN3_RS06870	COG3048	D-serine ammonia-lyase activity
AhaeAN3_RS06875	COG0243	molybdopterin cofactor binding
AhaeAN3_RS06880	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
AhaeAN3_RS06895	COG0521	Mo-molybdopterin cofactor biosynthetic process
AhaeAN3_RS06895	COG0315	cyclic pyranopterin monophosphate synthase activity
AhaeAN3_RS06900	COG0303	'Molybdopterin
AhaeAN3_RS06910	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AhaeAN3_RS06915	COG0697	spore germination
AhaeAN3_RS06935	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
AhaeAN3_RS06940	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
AhaeAN3_RS06980	COG1309	transcriptional regulator
AhaeAN3_RS06990	COG3852	Histidine kinase
AhaeAN3_RS07000	COG0528	UMP kinase activity
AhaeAN3_RS07010	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
AhaeAN3_RS07015	COG0575	Belongs to the CDS family
AhaeAN3_RS07050	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
AhaeAN3_RS07055	COG2207	Transcriptional regulator
AhaeAN3_RS07060	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AhaeAN3_RS07065	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AhaeAN3_RS07070	COG1960	acyl-CoA dehydrogenase activity
AhaeAN3_RS07075	COG1960	acyl-CoA dehydrogenase activity
AhaeAN3_RS07120	COG2814	Major facilitator Superfamily
AhaeAN3_RS07135	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AhaeAN3_RS07150	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
AhaeAN3_RS07155	COG0406	alpha-ribazole phosphatase activity
AhaeAN3_RS07175	COG4771	TonB-dependent receptor
AhaeAN3_RS07185	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
AhaeAN3_RS07190	COG0730	response to heat
AhaeAN3_RS07205	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
AhaeAN3_RS07230	COG0537	adenosine 5'-monophosphoramidase activity
AhaeAN3_RS07255	COG4683	PFAM Phage derived protein Gp49-like (DUF891)
AhaeAN3_RS07290	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
AhaeAN3_RS07310	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
AhaeAN3_RS07330	COG2205	protein histidine kinase activity
AhaeAN3_RS07350	COG3706	GGDEF domain
AhaeAN3_RS07360	COG2249	NAD(P)H dehydrogenase (quinone) activity
AhaeAN3_RS07370	COG2801	Transposase and inactivated derivatives
AhaeAN3_RS07400	COG4774	siderophore transport
AhaeAN3_RS07410	COG0583	DNA-binding transcription factor activity
AhaeAN3_RS07425	COG0183	Belongs to the thiolase family
AhaeAN3_RS07430	COG2814	Major facilitator Superfamily
AhaeAN3_RS07445	COG2826	transposase and inactivated derivatives, IS30 family
AhaeAN3_RS07455	COG0318	PFAM AMP-dependent synthetase and ligase
AhaeAN3_RS07460	COG1309	transcriptional regulator
AhaeAN3_RS07465	COG1960	acyl-CoA dehydrogenase activity
AhaeAN3_RS07470	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
AhaeAN3_RS07475	COG1024	Enoyl-CoA hydratase
AhaeAN3_RS07490	COG0583	DNA-binding transcription factor activity
AhaeAN3_RS07550	COG1595	DNA-templated transcription, initiation
AhaeAN3_RS07555	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AhaeAN3_RS07565	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AhaeAN3_RS07570	COG0864	Transcriptional regulator
AhaeAN3_RS07575	COG0439	Biotin carboxylase
AhaeAN3_RS07590	COG1522	sequence-specific DNA binding
AhaeAN3_RS07610	COG1944	ATP diphosphatase activity
AhaeAN3_RS07640	COG2826	transposase and inactivated derivatives, IS30 family
AhaeAN3_RS07660	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
AhaeAN3_RS07670	COG1063	alcohol dehydrogenase
AhaeAN3_RS07675	COG2207	Transcriptional regulator
AhaeAN3_RS07680	COG2826	transposase and inactivated derivatives, IS30 family
AhaeAN3_RS07695	COG1802	Transcriptional regulator
AhaeAN3_RS07710	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
AhaeAN3_RS07720	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AhaeAN3_RS07775	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
AhaeAN3_RS07780	COG0148	phosphopyruvate hydratase activity
AhaeAN3_RS07815	COG1902	pentaerythritol trinitrate reductase activity
AhaeAN3_RS07815	COG0446	pyridine nucleotide-disulphide oxidoreductase
AhaeAN3_RS07825	COG2267	carboxylic ester hydrolase activity
AhaeAN3_RS07830	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
AhaeAN3_RS07840	COG0542	response to heat
AhaeAN3_RS07845	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
AhaeAN3_RS07875	COG1451	nucleotide metabolic process
AhaeAN3_RS07880	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
AhaeAN3_RS07885	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
AhaeAN3_RS07890	COG0569	domain protein
AhaeAN3_RS07895	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
AhaeAN3_RS07915	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AhaeAN3_RS07940	COG1294	oxidase, subunit
AhaeAN3_RS07945	COG4890	Cyd operon protein YbgT
AhaeAN3_RS07970	COG0552	protein localization to endoplasmic reticulum
AhaeAN3_RS07995	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
AhaeAN3_RS07995	COG0517	IMP dehydrogenase activity
AhaeAN3_RS08000	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
AhaeAN3_RS08005	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
AhaeAN3_RS08015	COG0583	DNA-binding transcription factor activity
AhaeAN3_RS08020	COG0024	Methionine aminopeptidase
AhaeAN3_RS08065	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
AhaeAN3_RS08070	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
AhaeAN3_RS08085	COG2801	Transposase and inactivated derivatives
AhaeAN3_RS08090	COG2431	L-lysine efflux transmembrane transporter activity
AhaeAN3_RS08105	COG0776	regulation of translation
AhaeAN3_RS08125	COG0590	tRNA wobble adenosine to inosine editing
AhaeAN3_RS08170	COG0084	hydrolase, TatD family'
AhaeAN3_RS08195	COG1663	tetraacyldisaccharide 4'-kinase activity
AhaeAN3_RS08200	COG1132	(ABC) transporter
AhaeAN3_RS08210	COG0811	peptide transport
AhaeAN3_RS08215	COG1475	DNA binding
AhaeAN3_RS08220	COG1192	Involved in chromosome partitioning
AhaeAN3_RS08230	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
AhaeAN3_RS08245	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AhaeAN3_RS08255	COG0513	Belongs to the DEAD box helicase family
AhaeAN3_RS08275	COG2363	Small membrane protein
AhaeAN3_RS08315	COG3550	peptidyl-serine autophosphorylation
AhaeAN3_RS08325	COG2195	Cleaves the N-terminal amino acid of tripeptides
AhaeAN3_RS08355	COG1464	Belongs to the NlpA lipoprotein family
AhaeAN3_RS08360	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
AhaeAN3_RS08365	COG2011	ABC-type metal ion transport system permease component
AhaeAN3_RS08370	COG0012	GTP binding
AhaeAN3_RS08380	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AhaeAN3_RS08385	COG1253	flavin adenine dinucleotide binding
AhaeAN3_RS08395	COG1942	4-Oxalocrotonate Tautomerase
AhaeAN3_RS08410	COG0436	Aminotransferase
AhaeAN3_RS08420	COG1522	sequence-specific DNA binding
AhaeAN3_RS08425	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AhaeAN3_RS08435	COG0386	Belongs to the glutathione peroxidase family
AhaeAN3_RS08440	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
AhaeAN3_RS08445	COG0436	Aminotransferase
AhaeAN3_RS08495	COG3042	response to heat
AhaeAN3_RS08505	COG1278	Cold shock
AhaeAN3_RS08515	COG1278	Cold shock
AhaeAN3_RS08535	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
AhaeAN3_RS08535	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
AhaeAN3_RS08595	COG2801	Transposase and inactivated derivatives
AhaeAN3_RS08605	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
AhaeAN3_RS08625	COG1960	acyl-CoA dehydrogenase activity
AhaeAN3_RS08635	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
AhaeAN3_RS08655	COG3501	Rhs element vgr protein
AhaeAN3_RS08660	COG3293	Transposase
AhaeAN3_RS08665	COG3139	Protein of unknown function (DUF1315)
AhaeAN3_RS08670	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
AhaeAN3_RS08675	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AhaeAN3_RS08685	COG0494	nUDIX hydrolase
AhaeAN3_RS08695	COG0642	Histidine kinase
AhaeAN3_RS08700	COG0745	RESPONSE REGULATOR receiver
AhaeAN3_RS08710	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
AhaeAN3_RS08715	COG1720	tRNA m6t6A37 methyltransferase activity
AhaeAN3_RS08750	COG0583	DNA-binding transcription factor activity
AhaeAN3_RS08755	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
AhaeAN3_RS08765	COG2814	Major facilitator Superfamily
AhaeAN3_RS08770	COG4607	ABC-type enterochelin transport system periplasmic component
AhaeAN3_RS08775	COG4604	ABC transporter, ATP-binding protein
AhaeAN3_RS08780	COG4605	iron ion homeostasis
AhaeAN3_RS08785	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AhaeAN3_RS08795	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AhaeAN3_RS08800	COG0471	metal ion transport
AhaeAN3_RS08810	COG2826	transposase and inactivated derivatives, IS30 family
AhaeAN3_RS08830	COG0729	surface antigen
AhaeAN3_RS08855	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
AhaeAN3_RS08890	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
AhaeAN3_RS08950	COG3676	manually curated
AhaeAN3_RS08955	COG1131	(ABC) transporter
AhaeAN3_RS08960	COG0842	Transport permease protein
AhaeAN3_RS08975	COG0772	Belongs to the SEDS family
AhaeAN3_RS08980	COG2951	lytic endotransglycosylase activity
AhaeAN3_RS09005	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
AhaeAN3_RS09020	COG1643	Atp-dependent helicase
AhaeAN3_RS09025	COG0450	alkyl hydroperoxide reductase
AhaeAN3_RS09035	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AhaeAN3_RS09055	COG3634	alkyl hydroperoxide reductase activity
AhaeAN3_RS09075	COG0220	tRNA (guanine-N7-)-methyltransferase activity
AhaeAN3_RS09090	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
AhaeAN3_RS09100	COG0518	GMP synthase (glutamine-hydrolyzing) activity
AhaeAN3_RS09100	COG0519	Catalyzes the synthesis of GMP from XMP
AhaeAN3_RS09110	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
AhaeAN3_RS09120	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
AhaeAN3_RS09130	COG2249	NAD(P)H dehydrogenase (quinone) activity
AhaeAN3_RS09140	COG0697	spore germination
AhaeAN3_RS09145	COG1923	regulation of RNA biosynthetic process
AhaeAN3_RS09155	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
AhaeAN3_RS09160	COG0802	atpase or kinase
AhaeAN3_RS09190	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AhaeAN3_RS09195	COG3300	MHYT domain
AhaeAN3_RS09195	COG5001	Diguanylate cyclase
AhaeAN3_RS09215	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
AhaeAN3_RS09220	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
AhaeAN3_RS09225	COG1845	cytochrome c oxidase, subunit III
AhaeAN3_RS09230	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
AhaeAN3_RS09255	COG2249	NAD(P)H dehydrogenase (quinone) activity
AhaeAN3_RS09260	COG1733	regulation of RNA biosynthetic process
AhaeAN3_RS09265	COG0305	Participates in initiation and elongation during chromosome replication
AhaeAN3_RS09270	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
AhaeAN3_RS09280	COG3328	transposase activity
AhaeAN3_RS09295	COG1305	Transglutaminase-like
AhaeAN3_RS09305	COG2308	Evidence 4 Homologs of previously reported genes of
AhaeAN3_RS09320	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
AhaeAN3_RS09340	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
AhaeAN3_RS09350	COG0527	aspartate kinase activity
AhaeAN3_RS09360	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
AhaeAN3_RS09370	COG3038	cytochrome b561
AhaeAN3_RS09375	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
AhaeAN3_RS09380	COG2252	PERMEase
AhaeAN3_RS09435	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
AhaeAN3_RS09440	COG0138	bifunctional purine biosynthesis protein purh
AhaeAN3_RS09445	COG0151	Belongs to the GarS family
AhaeAN3_RS09450	COG1464	Belongs to the NlpA lipoprotein family
AhaeAN3_RS09455	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
AhaeAN3_RS09460	COG2011	ABC-type metal ion transport system permease component
AhaeAN3_RS09485	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
AhaeAN3_RS09490	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
AhaeAN3_RS09495	COG1385	rRNA (uridine-N3-)-methyltransferase activity
AhaeAN3_RS09520	COG0052	Belongs to the universal ribosomal protein uS2 family
AhaeAN3_RS09525	COG0024	Methionine aminopeptidase
AhaeAN3_RS09545	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AhaeAN3_RS09550	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
AhaeAN3_RS09560	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
AhaeAN3_RS09595	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
AhaeAN3_RS09600	COG3161	chorismate lyase activity
AhaeAN3_RS09610	COG0512	Glutamine amidotransferase of anthranilate synthase
AhaeAN3_RS09620	COG3217	Mosc domain protein beta barrel domain protein
AhaeAN3_RS09620	COG0633	Ferredoxin
AhaeAN3_RS09645	COG0302	gtp cyclohydrolase
AhaeAN3_RS09665	COG3739	integral membrane protein
AhaeAN3_RS09680	COG3706	GGDEF domain
AhaeAN3_RS09680	COG5001	Diguanylate cyclase
AhaeAN3_RS09680	COG4251	negative regulation of phosphorylation
AhaeAN3_RS09680	COG2203	Gaf domain
AhaeAN3_RS09690	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AhaeAN3_RS09705	COG4172	Belongs to the ABC transporter superfamily
AhaeAN3_RS09710	COG4239	(ABC) transporter, permease
AhaeAN3_RS09715	COG4174	ABC transporter (Permease)
AhaeAN3_RS09720	COG4166	transmembrane transport
AhaeAN3_RS09725	COG0741	lytic transglycosylase activity
AhaeAN3_RS09725	COG1388	LysM domain
AhaeAN3_RS09725	COG0741	lytic transglycosylase activity
AhaeAN3_RS09725	COG1388	LysM domain
AhaeAN3_RS09730	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AhaeAN3_RS09740	COG2816	NAD+ diphosphatase activity
AhaeAN3_RS09770	COG0583	DNA-binding transcription factor activity
AhaeAN3_RS09775	COG1279	arginine transmembrane transporter activity
AhaeAN3_RS09785	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AhaeAN3_RS09790	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AhaeAN3_RS09795	COG0006	proline dipeptidase activity
AhaeAN3_RS09825	COG2217	Heavy metal translocating P-type atpase
AhaeAN3_RS09885	COG2826	transposase and inactivated derivatives, IS30 family
AhaeAN3_RS09895	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
AhaeAN3_RS09910	COG3328	transposase activity
AhaeAN3_RS09915	COG3384	dioxygenase
AhaeAN3_RS09925	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
AhaeAN3_RS09955	COG3501	Rhs element vgr protein
AhaeAN3_RS09960	COG2878	Part of a membrane complex involved in electron transport
AhaeAN3_RS09965	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
AhaeAN3_RS09990	COG0768	penicillin binding
AhaeAN3_RS09995	COG0742	ribosomal rna small subunit methyltransferase
AhaeAN3_RS10020	COG0616	signal peptide processing
AhaeAN3_RS10025	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
AhaeAN3_RS10035	COG0573	inorganic phosphate transmembrane transporter activity
AhaeAN3_RS10050	COG0076	glutamate decarboxylase activity
AhaeAN3_RS10055	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
AhaeAN3_RS10095	COG0783	Belongs to the Dps family
AhaeAN3_RS10105	COG0564	pseudouridine synthase activity
AhaeAN3_RS10120	COG0352	thiamine-phosphate diphosphorylase activity
AhaeAN3_RS10150	COG0612	Peptidase, M16
AhaeAN3_RS10155	COG0384	phenazine biosynthesis protein PhzF
AhaeAN3_RS10190	COG1686	Belongs to the peptidase S11 family
AhaeAN3_RS10195	COG1252	NADH dehydrogenase
AhaeAN3_RS10205	COG0415	Belongs to the DNA photolyase family
AhaeAN3_RS10235	COG2197	response regulator
AhaeAN3_RS10240	COG4585	Histidine kinase
AhaeAN3_RS10255	COG0705	Rhomboid family
AhaeAN3_RS10255	COG0457	Tetratricopeptide repeat
AhaeAN3_RS10265	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
AhaeAN3_RS10270	COG4181	ATPase activity
AhaeAN3_RS10280	COG0456	acetyltransferase
AhaeAN3_RS10320	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
AhaeAN3_RS10345	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
AhaeAN3_RS10350	COG1597	lipid kinase activity
AhaeAN3_RS10370	COG4773	Receptor
AhaeAN3_RS10385	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
AhaeAN3_RS10395	COG2388	GCN5-related N-acetyl-transferase
AhaeAN3_RS10440	COG4681	YaeQ
AhaeAN3_RS10445	COG0523	cobalamin synthesis protein
AhaeAN3_RS10455	COG1607	acyl-coa hydrolase
AhaeAN3_RS10475	COG2814	Major facilitator Superfamily
AhaeAN3_RS10480	COG1024	Enoyl-CoA hydratase
AhaeAN3_RS10485	COG1012	belongs to the aldehyde dehydrogenase family
AhaeAN3_RS10495	COG1960	acyl-CoA dehydrogenase activity
AhaeAN3_RS10515	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AhaeAN3_RS10520	COG1414	Transcriptional regulator
AhaeAN3_RS10530	COG0281	malic enzyme
AhaeAN3_RS10535	COG0833	amino acid
AhaeAN3_RS10550	COG1012	belongs to the aldehyde dehydrogenase family
AhaeAN3_RS10560	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
AhaeAN3_RS10565	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
AhaeAN3_RS10575	COG1960	acyl-CoA dehydrogenase activity
AhaeAN3_RS10580	COG1454	alcohol dehydrogenase
AhaeAN3_RS10590	COG2826	transposase and inactivated derivatives, IS30 family
AhaeAN3_RS10620	COG0625	glutathione transferase activity
AhaeAN3_RS10645	COG2814	Major facilitator Superfamily
AhaeAN3_RS10650	COG1566	PFAM secretion protein HlyD family protein
AhaeAN3_RS10655	COG2050	protein possibly involved in aromatic compounds catabolism
AhaeAN3_RS10665	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AhaeAN3_RS10670	COG1090	epimerase
AhaeAN3_RS10690	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
AhaeAN3_RS10695	COG0420	3'-5' exonuclease activity
AhaeAN3_RS10725	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AhaeAN3_RS10730	COG2914	Belongs to the UPF0125 (RnfH) family
AhaeAN3_RS10745	COG0121	glutamine amidotransferase
AhaeAN3_RS10760	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
AhaeAN3_RS10765	COG0756	dUTP diphosphatase activity
AhaeAN3_RS10770	COG0210	DNA helicase
AhaeAN3_RS10775	COG2885	chlorophyll binding
AhaeAN3_RS10780	COG0204	Acyl-transferase
AhaeAN3_RS10790	COG0850	regulation of cytokinetic process
AhaeAN3_RS10795	COG2894	cell division
AhaeAN3_RS10800	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
AhaeAN3_RS10810	COG1280	lysine exporter protein (LysE YggA)
AhaeAN3_RS10815	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
AhaeAN3_RS10815	COG1674	ftsk spoiiie
AhaeAN3_RS10820	COG0492	ferredoxin-NADP+ reductase activity
AhaeAN3_RS10825	COG0500	methyltransferase
AhaeAN3_RS10830	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
AhaeAN3_RS10840	COG0456	acetyltransferase
AhaeAN3_RS10855	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
AhaeAN3_RS10865	COG0049	tRNA binding
AhaeAN3_RS10900	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
AhaeAN3_RS10900	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AhaeAN3_RS10925	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
AhaeAN3_RS10935	COG0582	viral genome integration into host DNA
AhaeAN3_RS10950	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AhaeAN3_RS10995	COG2132	Multicopper oxidase
AhaeAN3_RS11010	COG2205	protein histidine kinase activity
AhaeAN3_RS11015	COG2217	Heavy metal translocating P-type atpase
AhaeAN3_RS11125	COG0564	pseudouridine synthase activity
AhaeAN3_RS11135	COG0358	DNA primase activity
AhaeAN3_RS11150	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
AhaeAN3_RS11165	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
AhaeAN3_RS11200	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
AhaeAN3_RS11210	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
AhaeAN3_RS11210	COG0351	phosphomethylpyrimidine kinase
AhaeAN3_RS11210	COG0352	thiamine-phosphate diphosphorylase activity
AhaeAN3_RS11220	COG1652	LysM domain
AhaeAN3_RS11245	COG0333	Belongs to the bacterial ribosomal protein bL32 family
AhaeAN3_RS11250	COG1399	metal-binding, possibly nucleic acid-binding protein
AhaeAN3_RS11255	COG3101	peptidyl-lysine hydroxylation
AhaeAN3_RS11260	COG0009	L-threonylcarbamoyladenylate synthase
AhaeAN3_RS11280	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
AhaeAN3_RS11285	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
AhaeAN3_RS11315	COG0747	negative chemotaxis
AhaeAN3_RS11365	COG4106	trans-aconitate 2-methyltransferase activity
AhaeAN3_RS11380	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
AhaeAN3_RS11380	COG2226	methyltransferase
AhaeAN3_RS11380	COG0596	Alpha beta hydrolase
AhaeAN3_RS11385	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
AhaeAN3_RS11400	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
AhaeAN3_RS11410	COG1196	nuclear chromosome segregation
AhaeAN3_RS11420	COG0730	response to heat
AhaeAN3_RS11440	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
AhaeAN3_RS11510	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
AhaeAN3_RS11515	COG0489	protein tyrosine kinase activity
AhaeAN3_RS11535	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AhaeAN3_RS11535	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AhaeAN3_RS11545	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
AhaeAN3_RS11565	COG2515	1-aminocyclopropane-1-carboxylate deaminase
AhaeAN3_RS11570	COG2081	HI0933 family
AhaeAN3_RS11575	COG0668	transmembrane transport
AhaeAN3_RS11595	COG0583	DNA-binding transcription factor activity
AhaeAN3_RS11620	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AhaeAN3_RS11625	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
AhaeAN3_RS11630	COG0713	ATP synthesis coupled electron transport
AhaeAN3_RS11640	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AhaeAN3_RS11655	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
AhaeAN3_RS11665	COG0649	NAD binding
AhaeAN3_RS11665	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AhaeAN3_RS11675	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AhaeAN3_RS11690	COG2205	protein histidine kinase activity
AhaeAN3_RS11695	COG0745	RESPONSE REGULATOR receiver
AhaeAN3_RS11710	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AhaeAN3_RS11745	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
AhaeAN3_RS11750	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
AhaeAN3_RS11755	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
AhaeAN3_RS11760	COG2076	Multidrug Resistance protein
AhaeAN3_RS11780	COG2132	Multicopper oxidase
AhaeAN3_RS11790	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
AhaeAN3_RS11815	COG1968	undecaprenyl-diphosphatase activity
AhaeAN3_RS11820	COG1214	PFAM Peptidase M22, glycoprotease
AhaeAN3_RS11830	COG0494	nUDIX hydrolase
AhaeAN3_RS11880	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
AhaeAN3_RS11890	COG1595	DNA-templated transcription, initiation
AhaeAN3_RS11895	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
AhaeAN3_RS11900	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
AhaeAN3_RS11965	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AhaeAN3_RS11975	COG1764	response to oxidative stress
AhaeAN3_RS12000	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AhaeAN3_RS12000	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AhaeAN3_RS12015	COG0037	tRNA processing
AhaeAN3_RS12025	COG0248	Ppx GppA phosphatase
AhaeAN3_RS12050	COG0072	phenylalanine-tRNA ligase activity
AhaeAN3_RS12075	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
AhaeAN3_RS12085	COG1238	metal cluster binding
AhaeAN3_RS12100	COG0625	glutathione transferase activity
AhaeAN3_RS12120	COG0318	PFAM AMP-dependent synthetase and ligase
AhaeAN3_RS12125	COG3028	Belongs to the UPF0307 family
AhaeAN3_RS12150	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
AhaeAN3_RS12155	COG0617	tRNA 3'-terminal CCA addition
AhaeAN3_RS12160	COG1555	photosystem II stabilization
AhaeAN3_RS12165	COG3956	TIGRFAM MazG family protein
AhaeAN3_RS12215	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
AhaeAN3_RS12235	COG2205	protein histidine kinase activity
AhaeAN3_RS12235	COG5002	protein histidine kinase activity
AhaeAN3_RS12235	COG0784	Response regulator, receiver
AhaeAN3_RS12240	COG1024	Enoyl-CoA hydratase
AhaeAN3_RS12245	COG2084	Dehydrogenase
AhaeAN3_RS12250	COG3622	Belongs to the hyi family
AhaeAN3_RS12265	COG0004	ammonium transporteR
AhaeAN3_RS12275	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
AhaeAN3_RS12280	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
AhaeAN3_RS12285	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
AhaeAN3_RS12290	COG0789	Transcriptional regulator
AhaeAN3_RS12300	COG2814	Major facilitator Superfamily
AhaeAN3_RS12305	COG5285	phytanoyl-CoA dioxygenase
AhaeAN3_RS12315	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
AhaeAN3_RS12320	COG0456	acetyltransferase
AhaeAN3_RS12330	COG0431	NADPH-dependent FMN reductase
AhaeAN3_RS12335	COG0798	PFAM Bile acid sodium symporter
AhaeAN3_RS12345	COG0640	Transcriptional regulator
AhaeAN3_RS12365	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
AhaeAN3_RS12375	COG0732	type I restriction modification DNA specificity domain
AhaeAN3_RS12385	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
AhaeAN3_RS12405	COG0174	glutamine synthetase
AhaeAN3_RS12420	COG2826	transposase and inactivated derivatives, IS30 family
AhaeAN3_RS12425	COG2015	COG2015, Alkyl sulfatase and related hydrolases
AhaeAN3_RS12435	COG0745	RESPONSE REGULATOR receiver
AhaeAN3_RS12440	COG2205	protein histidine kinase activity
AhaeAN3_RS12450	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
AhaeAN3_RS12455	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
AhaeAN3_RS12535	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AhaeAN3_RS12545	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
AhaeAN3_RS12555	COG0084	hydrolase, TatD family'
AhaeAN3_RS12560	COG0726	polysaccharide deacetylase
AhaeAN3_RS12570	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
AhaeAN3_RS12625	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
AhaeAN3_RS12650	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
AhaeAN3_RS12655	COG0440	acetolactate synthase activity
AhaeAN3_RS12660	COG0028	Belongs to the TPP enzyme family
AhaeAN3_RS12680	COG1466	dna polymerase III delta subunit
AhaeAN3_RS12685	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AhaeAN3_RS12690	COG0577	efflux transmembrane transporter activity
AhaeAN3_RS12690	COG1136	(ABC) transporter
AhaeAN3_RS12695	COG1538	Outer membrane efflux protein
AhaeAN3_RS12720	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
AhaeAN3_RS12725	COG1162	GTPase activity
AhaeAN3_RS12760	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
AhaeAN3_RS12770	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
AhaeAN3_RS12780	COG3781	membrane
AhaeAN3_RS12815	COG1666	GTP binding
AhaeAN3_RS12830	COG1956	GAF domain-containing protein
AhaeAN3_RS12835	COG1607	acyl-coa hydrolase
AhaeAN3_RS12850	COG3453	Protein conserved in bacteria
AhaeAN3_RS12850	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AhaeAN3_RS12890	COG1183	phosphatidylcholine synthase activity
AhaeAN3_RS12895	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
AhaeAN3_RS12925	COG0741	lytic transglycosylase activity
AhaeAN3_RS12925	COG1196	nuclear chromosome segregation
AhaeAN3_RS12925	COG0739	heme binding
AhaeAN3_RS12935	COG1702	phosphate starvation-inducible protein PhoH
AhaeAN3_RS12975	COG3878	Protein conserved in bacteria
AhaeAN3_RS13020	COG0788	formyltetrahydrofolate deformylase activity
AhaeAN3_RS13035	COG0227	Belongs to the bacterial ribosomal protein bL28 family
AhaeAN3_RS13040	COG0267	Belongs to the bacterial ribosomal protein bL33 family
AhaeAN3_RS13045	COG4651	solute:proton antiporter activity
AhaeAN3_RS13045	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
AhaeAN3_RS13065	COG0210	DNA helicase
AhaeAN3_RS13110	COG1560	Kdo2-lipid A biosynthetic process
AhaeAN3_RS13160	COG0473	3-isopropylmalate dehydrogenase activity
AhaeAN3_RS13195	COG0494	nUDIX hydrolase
AhaeAN3_RS13210	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
AhaeAN3_RS13230	COG0625	glutathione transferase activity
AhaeAN3_RS13245	COG0564	pseudouridine synthase activity
AhaeAN3_RS13255	COG1530	ribonuclease E activity
AhaeAN3_RS13275	COG0635	Involved in the biosynthesis of porphyrin-containing compound
AhaeAN3_RS13285	COG0534	Mate efflux family protein
AhaeAN3_RS13290	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
AhaeAN3_RS13315	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
AhaeAN3_RS13340	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
AhaeAN3_RS13380	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AhaeAN3_RS13395	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
AhaeAN3_RS13405	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
AhaeAN3_RS13405	COG0644	oxidoreductase
AhaeAN3_RS13410	COG0425	Belongs to the sulfur carrier protein TusA family
AhaeAN3_RS13415	COG4535	Mg2 and Co2 transporter CorC
AhaeAN3_RS13420	COG0815	Transfers the fatty acyl group on membrane lipoproteins
AhaeAN3_RS13430	COG2826	transposase and inactivated derivatives, IS30 family
AhaeAN3_RS13445	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
AhaeAN3_RS13455	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
AhaeAN3_RS13470	COG0789	Transcriptional regulator
AhaeAN3_RS13475	COG0598	Magnesium transport protein CorA
AhaeAN3_RS13480	COG1185	polyribonucleotide nucleotidyltransferase activity
AhaeAN3_RS13485	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
AhaeAN3_RS13495	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
AhaeAN3_RS13500	COG1074	ATP-dependent DNA helicase activity
AhaeAN3_RS13505	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
AhaeAN3_RS13530	COG2226	methyltransferase
AhaeAN3_RS13555	COG1116	anion transmembrane transporter activity
AhaeAN3_RS13560	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AhaeAN3_RS13570	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
AhaeAN3_RS13585	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
AhaeAN3_RS13585	COG2111	Na H antiporter
AhaeAN3_RS13590	COG1006	Multisubunit Na H antiporter MnhC subunit
AhaeAN3_RS13595	COG0651	ATP synthesis coupled electron transport
AhaeAN3_RS13605	COG2212	antiporter activity
AhaeAN3_RS13630	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
AhaeAN3_RS13640	COG0195	Participates in both transcription termination and antitermination
AhaeAN3_RS13690	COG0237	dephospho-CoA kinase activity
AhaeAN3_RS13700	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AhaeAN3_RS13710	COG0497	DNA recombination
AhaeAN3_RS13720	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
AhaeAN3_RS13745	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
AhaeAN3_RS13785	COG1132	(ABC) transporter
AhaeAN3_RS13795	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
AhaeAN3_RS13810	COG0326	Molecular chaperone. Has ATPase activity
AhaeAN3_RS13820	COG2056	Na+-H+ antiporter family
AhaeAN3_RS13870	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
AhaeAN3_RS13880	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
AhaeAN3_RS13890	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
AhaeAN3_RS13920	COG0546	phosphoglycolate phosphatase activity
AhaeAN3_RS13925	COG1716	ATPase activity
AhaeAN3_RS13970	COG0181	hydroxymethylbilane synthase activity
AhaeAN3_RS13980	COG3275	phosphorelay sensor kinase activity
AhaeAN3_RS14030	COG0494	nUDIX hydrolase
AhaeAN3_RS14040	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
AhaeAN3_RS14045	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
AhaeAN3_RS14050	COG0772	Belongs to the SEDS family
AhaeAN3_RS14075	COG4974	Belongs to the 'phage' integrase family
AhaeAN3_RS14080	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
AhaeAN3_RS14090	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
AhaeAN3_RS14095	COG1686	Belongs to the peptidase S11 family
AhaeAN3_RS14100	COG2197	response regulator
AhaeAN3_RS14115	COG0793	Belongs to the peptidase S41A family
AhaeAN3_RS14120	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
AhaeAN3_RS14125	COG0795	lipopolysaccharide-transporting ATPase activity
AhaeAN3_RS14130	COG0795	lipopolysaccharide-transporting ATPase activity
AhaeAN3_RS14165	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AhaeAN3_RS14165	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AhaeAN3_RS14170	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
AhaeAN3_RS14175	COG0004	ammonium transporteR
AhaeAN3_RS14180	COG0347	Belongs to the P(II) protein family
AhaeAN3_RS14250	COG1538	Outer membrane efflux protein
AhaeAN3_RS14260	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AhaeAN3_RS14265	COG1230	cation diffusion facilitator family transporter
AhaeAN3_RS14275	COG0640	Transcriptional regulator
AhaeAN3_RS14285	COG0789	Transcriptional regulator
AhaeAN3_RS14315	COG2814	Major facilitator Superfamily
AhaeAN3_RS14355	COG0633	Ferredoxin
AhaeAN3_RS14400	COG0606	chelatase, subunit chli
AhaeAN3_RS14440	COG0318	PFAM AMP-dependent synthetase and ligase
AhaeAN3_RS14450	COG2860	membrane
AhaeAN3_RS14460	COG1253	flavin adenine dinucleotide binding
AhaeAN3_RS14475	COG2814	Major facilitator Superfamily
AhaeAN3_RS14485	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AhaeAN3_RS14510	COG2814	Major facilitator Superfamily
AhaeAN3_RS14520	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
AhaeAN3_RS14530	COG1283	sodium-dependent phosphate transmembrane transporter activity
AhaeAN3_RS14560	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
AhaeAN3_RS14575	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AhaeAN3_RS14580	COG3162	membrane
AhaeAN3_RS14585	COG2205	protein histidine kinase activity
AhaeAN3_RS14610	COG1652	LysM domain
AhaeAN3_RS14615	COG0758	DNA mediated transformation
AhaeAN3_RS14630	COG1309	transcriptional regulator
AhaeAN3_RS14635	COG2814	Major facilitator Superfamily
AhaeAN3_RS14645	COG0386	Belongs to the glutathione peroxidase family
AhaeAN3_RS14670	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
AhaeAN3_RS14680	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
AhaeAN3_RS14720	COG1121	(ABC) transporter
AhaeAN3_RS14725	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AhaeAN3_RS14730	COG1280	lysine exporter protein (LysE YggA)
AhaeAN3_RS14735	COG2837	iron assimilation
AhaeAN3_RS14770	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
AhaeAN3_RS14775	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
AhaeAN3_RS14800	COG0518	GMP synthase (glutamine-hydrolyzing) activity
AhaeAN3_RS14800	COG0519	Catalyzes the synthesis of GMP from XMP
AhaeAN3_RS14805	COG4399	Belongs to the UPF0754 family
AhaeAN3_RS14815	COG2259	Doxx family
AhaeAN3_RS14820	COG0586	Pfam SNARE associated Golgi protein
AhaeAN3_RS14835	COG1192	Involved in chromosome partitioning
AhaeAN3_RS14845	COG0271	Belongs to the BolA IbaG family
AhaeAN3_RS14880	COG3756	Protein conserved in bacteria
AhaeAN3_RS14910	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
AhaeAN3_RS14915	COG0270	DNA (cytosine-5-)-methyltransferase activity
AhaeAN3_RS14980	COG3550	peptidyl-serine autophosphorylation
AhaeAN3_RS14985	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
AhaeAN3_RS15025	COG2826	transposase and inactivated derivatives, IS30 family
AhaeAN3_RS15030	COG2015	COG2015, Alkyl sulfatase and related hydrolases
AhaeAN3_RS15040	COG2826	transposase and inactivated derivatives, IS30 family
AhaeAN3_RS15080	COG0582	viral genome integration into host DNA
AhaeAN3_RS15095	COG2885	chlorophyll binding
AhaeAN3_RS15095	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
AhaeAN3_RS15110	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
AhaeAN3_RS15120	COG4115	mRNA cleavage
AhaeAN3_RS15135	COG0477	Major facilitator Superfamily
AhaeAN3_RS15140	COG1024	Enoyl-CoA hydratase
AhaeAN3_RS15145	COG1024	Enoyl-CoA hydratase
AhaeAN3_RS15150	COG1960	acyl-CoA dehydrogenase activity
AhaeAN3_RS15155	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AhaeAN3_RS15175	COG1113	amino acid transport
AhaeAN3_RS15180	COG0251	oxidation-reduction process
AhaeAN3_RS15195	COG1522	sequence-specific DNA binding
AhaeAN3_RS15205	COG0456	acetyltransferase
AhaeAN3_RS15215	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
AhaeAN3_RS15235	COG2826	transposase and inactivated derivatives, IS30 family
AhaeAN3_RS15245	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
AhaeAN3_RS15260	COG1802	Transcriptional regulator
AhaeAN3_RS15265	COG1448	Aminotransferase
AhaeAN3_RS15270	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
AhaeAN3_RS15275	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
AhaeAN3_RS15290	COG1210	Utp--glucose-1-phosphate uridylyltransferase
AhaeAN3_RS15300	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
AhaeAN3_RS15310	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
AhaeAN3_RS15325	COG1216	Glycosyl transferase, family 2
AhaeAN3_RS15345	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
AhaeAN3_RS15380	COG3023	N-Acetylmuramoyl-L-alanine amidase
AhaeAN3_RS15430	COG0546	phosphoglycolate phosphatase activity
AhaeAN3_RS15435	COG1028	Short-chain dehydrogenase reductase Sdr
AhaeAN3_RS15445	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
AhaeAN3_RS15445	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
AhaeAN3_RS15450	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AhaeAN3_RS15455	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AhaeAN3_RS15460	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AhaeAN3_RS15465	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AhaeAN3_RS15470	COG1116	anion transmembrane transporter activity
AhaeAN3_RS15475	COG1309	transcriptional regulator
AhaeAN3_RS15490	COG2801	Transposase and inactivated derivatives
AhaeAN3_RS15505	COG0196	riboflavin kinase activity
AhaeAN3_RS15510	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
AhaeAN3_RS15520	COG1047	Peptidyl-prolyl cis-trans
AhaeAN3_RS15560	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
AhaeAN3_RS15585	COG0583	DNA-binding transcription factor activity
AhaeAN3_RS15595	COG0443	Heat shock 70 kDa protein
AhaeAN3_RS15600	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
AhaeAN3_RS15625	COG2951	lytic endotransglycosylase activity
AhaeAN3_RS15630	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
AhaeAN3_RS15650	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
AhaeAN3_RS15670	COG1960	acyl-CoA dehydrogenase activity
AhaeAN3_RS15680	COG0861	Integral membrane protein TerC family
AhaeAN3_RS15685	COG0402	S-adenosylhomocysteine deaminase activity
AhaeAN3_RS15700	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
AhaeAN3_RS15715	COG0706	membrane insertase activity
AhaeAN3_RS15730	COG0230	Belongs to the bacterial ribosomal protein bL34 family
AhaeAN3_RS15750	COG2184	nucleotidyltransferase activity
AhaeAN3_RS15760	COG2801	Transposase and inactivated derivatives
AhaeAN3_RS15775	COG0543	2 iron, 2 sulfur cluster binding
AhaeAN3_RS15775	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AhaeAN3_RS15780	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
AhaeAN3_RS15785	COG4638	Rieske (2fe-2S)
AhaeAN3_RS15820	COG1192	Involved in chromosome partitioning
AhaeAN3_RS15830	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
AhaeAN3_RS15850	COG2801	Transposase and inactivated derivatives
AhaeAN3_RS15880	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
AhaeAN3_RS15995	COG1252	NADH dehydrogenase
AhaeAN3_RS16000	COG0627	Serine hydrolase involved in the detoxification of formaldehyde