locus-tag	class	description
AhaeAN59_RS00005	PF11638	DnaA N-terminal domain
AhaeAN59_RS00005	PF08299	Bacterial dnaA protein helix-turn-helix
AhaeAN59_RS00005	PF00308	Bacterial dnaA  protein
AhaeAN59_RS00010	PF02767	DNA polymerase III beta subunit, central domain
AhaeAN59_RS00010	PF02768	DNA polymerase III beta subunit, C-terminal domain
AhaeAN59_RS00010	PF00712	DNA polymerase III beta subunit, N-terminal domain
AhaeAN59_RS00015	PF02463	RecF/RecN/SMC N terminal domain
AhaeAN59_RS00020	PF00204	DNA gyrase B
AhaeAN59_RS00020	PF00986	DNA gyrase B subunit, carboxyl terminus
AhaeAN59_RS00020	PF18053	DNA gyrase B subunit insert domain
AhaeAN59_RS00020	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AhaeAN59_RS00020	PF01751	Toprim domain
AhaeAN59_RS00025	PF09335	SNARE associated Golgi protein
AhaeAN59_RS00030	PF00005	ABC transporter
AhaeAN59_RS00030	PF12848	ABC transporter
AhaeAN59_RS00050	PF01521	Iron-sulphur cluster biosynthesis
AhaeAN59_RS00055	PF03702	Anhydro-N-acetylmuramic acid kinase
AhaeAN59_RS00060	PF00579	tRNA synthetases class I (W and Y)
AhaeAN59_RS00100	PF03600	Citrate transporter
AhaeAN59_RS00100	PF02080	TrkA-C domain
AhaeAN59_RS00110	PF00171	Aldehyde dehydrogenase family
AhaeAN59_RS00115	PF06940	Domain of unknown function (DUF1287)
AhaeAN59_RS00120	PF00209	Sodium:neurotransmitter symporter family
AhaeAN59_RS00130	PF01189	16S rRNA methyltransferase RsmB/F
AhaeAN59_RS00130	PF01029	NusB family
AhaeAN59_RS00135	PF00551	Formyl transferase
AhaeAN59_RS00135	PF02911	Formyl transferase, C-terminal domain
AhaeAN59_RS00140	PF00920	Dehydratase family
AhaeAN59_RS00155	PF03466	LysR substrate binding domain
AhaeAN59_RS00155	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_RS00160	PF00860	Permease family
AhaeAN59_RS00165	PF00311	Phosphoenolpyruvate carboxylase
AhaeAN59_RS00175	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
AhaeAN59_RS00180	PF00873	AcrB/AcrD/AcrF family
AhaeAN59_RS00190	PF00226	DnaJ domain
AhaeAN59_RS00190	PF01556	DnaJ C terminal domain
AhaeAN59_RS00190	PF00684	DnaJ central domain
AhaeAN59_RS00195	PF05173	Dihydrodipicolinate reductase, C-terminus
AhaeAN59_RS00195	PF01113	Dihydrodipicolinate reductase, N-terminus
AhaeAN59_RS00205	PF07690	Major Facilitator Superfamily
AhaeAN59_RS00210	PF00248	Aldo/keto reductase family
AhaeAN59_RS00215	PF03466	LysR substrate binding domain
AhaeAN59_RS00215	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_RS00230	PF00107	Zinc-binding dehydrogenase
AhaeAN59_RS00230	PF08240	Alcohol dehydrogenase GroES-like domain
AhaeAN59_RS00235	PF03352	Methyladenine glycosylase
AhaeAN59_RS00250	PF10576	Iron-sulfur binding domain of endonuclease III
AhaeAN59_RS00250	PF00633	Helix-hairpin-helix motif
AhaeAN59_RS00250	PF00730	HhH-GPD superfamily base excision DNA repair protein
AhaeAN59_RS00250	PF14815	NUDIX domain
AhaeAN59_RS00260	PF07043	Protein of unknown function (DUF1328)
AhaeAN59_RS00265	PF03692	Putative zinc- or iron-chelating domain
AhaeAN59_RS00270	PF07995	Glucose / Sorbosone dehydrogenase
AhaeAN59_RS00275	PF00144	Beta-lactamase
AhaeAN59_RS00280	PF12002	MgsA AAA+ ATPase C terminal
AhaeAN59_RS00280	PF16193	AAA C-terminal domain
AhaeAN59_RS00280	PF00004	ATPase family associated with various cellular activities (AAA)
AhaeAN59_RS00285	PF00892	EamA-like transporter family
AhaeAN59_RS00290	PF01979	Amidohydrolase family
AhaeAN59_RS00295	PF01259	SAICAR synthetase
AhaeAN59_RS00305	PF00701	Dihydrodipicolinate synthetase family
AhaeAN59_RS00310	PF00857	Isochorismatase family
AhaeAN59_RS00315	PF01037	Lrp/AsnC ligand binding domain
AhaeAN59_RS00335	PF00004	ATPase family associated with various cellular activities (AAA)
AhaeAN59_RS00345	PF04851	Type III restriction enzyme, res subunit
AhaeAN59_RS00350	PF01555	DNA methylase
AhaeAN59_RS00365	PF13737	Transposase DDE domain
AhaeAN59_RS00370	PF18623	TnsE C-terminal domain
AhaeAN59_RS00375	PF06527	TniQ
AhaeAN59_RS00375	PF15978	Tn7-like transposition protein D
AhaeAN59_RS00380	PF00155	Aminotransferase class I and II
AhaeAN59_RS00380	PF00392	Bacterial regulatory proteins, gntR family
AhaeAN59_RS00385	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
AhaeAN59_RS00385	PF00117	Glutamine amidotransferase class-I
AhaeAN59_RS00390	PF00202	Aminotransferase class-III
AhaeAN59_RS00400	PF01168	Alanine racemase, N-terminal domain
AhaeAN59_RS00410	PF00701	Dihydrodipicolinate synthetase family
AhaeAN59_RS00415	PF00596	Class II Aldolase and Adducin N-terminal domain
AhaeAN59_RS00420	PF00392	Bacterial regulatory proteins, gntR family
AhaeAN59_RS00420	PF00155	Aminotransferase class I and II
AhaeAN59_RS00440	PF03050	Transposase IS66 family 
AhaeAN59_RS00440	PF13817	IS66 C-terminal element
AhaeAN59_RS00440	PF13007	Transposase C of IS166 homeodomain
AhaeAN59_RS00440	PF13005	zinc-finger binding domain of transposase IS66 
AhaeAN59_RS00465	PF03594	Benzoate membrane transport protein
AhaeAN59_RS00470	PF00155	Aminotransferase class I and II
AhaeAN59_RS00470	PF00392	Bacterial regulatory proteins, gntR family
AhaeAN59_RS00475	PF13401	AAA domain
AhaeAN59_RS00475	PF11426	Tn7 transposition regulator TnsC
AhaeAN59_RS00480	PF00665	Integrase core domain
AhaeAN59_RS00485	PF08722	TnsA endonuclease N terminal
AhaeAN59_RS00485	PF08721	TnsA endonuclease C terminal
AhaeAN59_RS00525	PF12161	HsdM N-terminal domain
AhaeAN59_RS00525	PF02384	N-6 DNA Methylase
AhaeAN59_RS00560	PF15978	Tn7-like transposition protein D
AhaeAN59_RS00560	PF06527	TniQ
AhaeAN59_RS00565	PF13401	AAA domain
AhaeAN59_RS00565	PF11426	Tn7 transposition regulator TnsC
AhaeAN59_RS00570	PF00665	Integrase core domain
AhaeAN59_RS00575	PF08721	TnsA endonuclease C terminal
AhaeAN59_RS00575	PF08722	TnsA endonuclease N terminal
AhaeAN59_RS00580	PF01380	SIS domain
AhaeAN59_RS00585	PF00132	Bacterial transferase hexapeptide (six repeats)
AhaeAN59_RS00585	PF14602	Hexapeptide repeat of succinyl-transferase
AhaeAN59_RS00585	PF12804	MobA-like NTP transferase domain
AhaeAN59_RS00590	PF04608	Phosphatidylglycerophosphatase A
AhaeAN59_RS00595	PF00586	AIR synthase related protein, N-terminal domain
AhaeAN59_RS00595	PF02769	AIR synthase related protein, C-terminal domain
AhaeAN59_RS00600	PF01029	NusB family
AhaeAN59_RS00605	PF00885	6,7-dimethyl-8-ribityllumazine synthase
AhaeAN59_RS00610	PF00925	GTP cyclohydrolase II
AhaeAN59_RS00610	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
AhaeAN59_RS00635	PF02580	D-Tyr-tRNA(Tyr) deacylase
AhaeAN59_RS00640	PF17767	Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain
AhaeAN59_RS00640	PF04095	Nicotinate phosphoribosyltransferase (NAPRTase) family
AhaeAN59_RS00645	PF00581	Rhodanese-like domain
AhaeAN59_RS00650	PF02666	Phosphatidylserine decarboxylase
AhaeAN59_RS00665	PF00313	'Cold-shock' DNA-binding domain
AhaeAN59_RS00670	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_RS00670	PF03466	LysR substrate binding domain
AhaeAN59_RS00680	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AhaeAN59_RS00680	PF00512	His Kinase A (phospho-acceptor) domain
AhaeAN59_RS00680	PF00989	PAS fold
AhaeAN59_RS00680	PF11808	Phosphate regulon sensor protein PhoR
AhaeAN59_RS00685	PF00486	Transcriptional regulatory protein, C terminal
AhaeAN59_RS00685	PF00072	Response regulator receiver domain
AhaeAN59_RS00695	PF00106	short chain dehydrogenase
AhaeAN59_RS00700	PF01554	MatE
AhaeAN59_RS00705	PF00155	Aminotransferase class I and II
AhaeAN59_RS00715	PF04286	Protein of unknown function (DUF445)
AhaeAN59_RS00730	PF04262	Glutamate-cysteine ligase 
AhaeAN59_RS00735	PF02600	Disulfide bond formation protein DsbB
AhaeAN59_RS00745	PF05728	Uncharacterised protein family (UPF0227)
AhaeAN59_RS00750	PF00986	DNA gyrase B subunit, carboxyl terminus
AhaeAN59_RS00750	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AhaeAN59_RS00750	PF00204	DNA gyrase B
AhaeAN59_RS00750	PF01751	Toprim domain
AhaeAN59_RS00765	PF02653	Branched-chain amino acid transport system / permease component
AhaeAN59_RS00775	PF00005	ABC transporter
AhaeAN59_RS00775	PF12399	Branched-chain amino acid ATP-binding cassette transporter
AhaeAN59_RS00780	PF00005	ABC transporter
AhaeAN59_RS00790	PF00583	Acetyltransferase (GNAT) family
AhaeAN59_RS00815	PF02683	Cytochrome C biogenesis protein transmembrane region
AhaeAN59_RS00815	PF11412	Disulphide bond corrector protein DsbC
AhaeAN59_RS00820	PF02798	Glutathione S-transferase, N-terminal domain
AhaeAN59_RS00820	PF00043	Glutathione S-transferase, C-terminal domain
AhaeAN59_RS00835	PF13737	Transposase DDE domain
AhaeAN59_RS00840	PF00005	ABC transporter
AhaeAN59_RS00840	PF00664	ABC transporter transmembrane region
AhaeAN59_RS00845	PF17151	Periplasmic sensor domain
AhaeAN59_RS00845	PF00990	Diguanylate cyclase, GGDEF domain
AhaeAN59_RS00850	PF07859	alpha/beta hydrolase fold
AhaeAN59_RS00860	PF03960	ArsC family
AhaeAN59_RS00865	PF03372	Endonuclease/Exonuclease/phosphatase family
AhaeAN59_RS00870	PF00156	Phosphoribosyl transferase domain
AhaeAN59_RS00880	PF00106	short chain dehydrogenase
AhaeAN59_RS00900	PF13737	Transposase DDE domain
AhaeAN59_RS00910	PF01047	MarR family
AhaeAN59_RS00915	PF00255	Glutathione peroxidase
AhaeAN59_RS00920	PF02951	Prokaryotic glutathione synthetase, N-terminal domain
AhaeAN59_RS00920	PF02955	Prokaryotic glutathione synthetase, ATP-grasp domain
AhaeAN59_RS00925	PF03033	Glycosyltransferase family 28 N-terminal domain
AhaeAN59_RS00925	PF04101	Glycosyltransferase family 28 C-terminal domain
AhaeAN59_RS00930	PF02875	Mur ligase family, glutamate ligase domain
AhaeAN59_RS00930	PF08245	Mur ligase middle domain
AhaeAN59_RS00930	PF01225	Mur ligase family, catalytic domain
AhaeAN59_RS00935	PF01820	D-ala D-ala ligase N-terminus
AhaeAN59_RS00935	PF07478	D-ala D-ala ligase C-terminus
AhaeAN59_RS00940	PF08478	POTRA domain, FtsQ-type
AhaeAN59_RS00940	PF03799	Cell division protein FtsQ
AhaeAN59_RS00945	PF02491	SHS2 domain inserted in FTSA
AhaeAN59_RS00950	PF12327	FtsZ family, C-terminal domain
AhaeAN59_RS00950	PF00091	Tubulin/FtsZ family, GTPase domain
AhaeAN59_RS00955	PF03331	UDP-3-O-acyl N-acetylglycosamine deacetylase
AhaeAN59_RS00970	PF17831	Pyruvate dehydrogenase E1 component middle domain
AhaeAN59_RS00970	PF00456	Transketolase, thiamine diphosphate binding domain
AhaeAN59_RS00975	PF00364	Biotin-requiring enzyme
AhaeAN59_RS00975	PF02817	e3 binding domain
AhaeAN59_RS00975	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
AhaeAN59_RS00985	PF01169	Uncharacterized protein family UPF0016
AhaeAN59_RS00990	PF07715	TonB-dependent Receptor Plug Domain
AhaeAN59_RS00990	PF00593	TonB dependent receptor
AhaeAN59_RS00995	PF01613	Flavin reductase like domain
AhaeAN59_RS00995	PF00258	Flavodoxin
AhaeAN59_RS01000	PF03692	Putative zinc- or iron-chelating domain
AhaeAN59_RS01005	PF00571	CBS domain
AhaeAN59_RS01005	PF00478	IMP dehydrogenase / GMP reductase domain
AhaeAN59_RS01010	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
AhaeAN59_RS01010	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
AhaeAN59_RS01010	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
AhaeAN59_RS01010	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
AhaeAN59_RS01015	PF10590	Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region
AhaeAN59_RS01015	PF01243	Pyridoxamine 5'-phosphate oxidase
AhaeAN59_RS01020	PF01368	DHH family
AhaeAN59_RS01020	PF02272	DHHA1 domain
AhaeAN59_RS01020	PF17768	RecJ OB domain
AhaeAN59_RS01040	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
AhaeAN59_RS01045	PF04413	3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)
AhaeAN59_RS01055	PF05552	Conserved TM helix
AhaeAN59_RS01055	PF00924	Mechanosensitive ion channel
AhaeAN59_RS01060	PF16177	Acetyl-coenzyme A synthetase N-terminus
AhaeAN59_RS01060	PF00501	AMP-binding enzyme
AhaeAN59_RS01060	PF13193	AMP-binding enzyme C-terminal domain
AhaeAN59_RS01065	PF00296	Luciferase-like monooxygenase
AhaeAN59_RS01070	PF03358	NADPH-dependent FMN reductase
AhaeAN59_RS01075	PF00196	Bacterial regulatory proteins, luxR family
AhaeAN59_RS01075	PF00072	Response regulator receiver domain
AhaeAN59_RS01090	PF00990	Diguanylate cyclase, GGDEF domain
AhaeAN59_RS01090	PF00563	EAL domain
AhaeAN59_RS01090	PF03707	Bacterial signalling protein N terminal repeat
AhaeAN59_RS01100	PF17760	UvrA interaction domain
AhaeAN59_RS01100	PF17755	UvrA DNA-binding domain
AhaeAN59_RS01115	PF03070	TENA/THI-4/PQQC family
AhaeAN59_RS01125	PF07690	Major Facilitator Superfamily
AhaeAN59_RS01130	PF00436	Single-strand binding protein family
AhaeAN59_RS01135	PF00324	Amino acid permease
AhaeAN59_RS01140	PF00155	Aminotransferase class I and II
AhaeAN59_RS01140	PF00392	Bacterial regulatory proteins, gntR family
AhaeAN59_RS01145	PF00202	Aminotransferase class-III
AhaeAN59_RS01150	PF00171	Aldehyde dehydrogenase family
AhaeAN59_RS01155	PF00857	Isochorismatase family
AhaeAN59_RS01160	PF03466	LysR substrate binding domain
AhaeAN59_RS01160	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_RS01165	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_RS01170	PF00857	Isochorismatase family
AhaeAN59_RS01175	PF02678	Pirin
AhaeAN59_RS01175	PF05726	Pirin C-terminal cupin domain
AhaeAN59_RS01180	PF01593	Flavin containing amine oxidoreductase
AhaeAN59_RS01230	PF13005	zinc-finger binding domain of transposase IS66 
AhaeAN59_RS01230	PF03050	Transposase IS66 family 
AhaeAN59_RS01230	PF13817	IS66 C-terminal element
AhaeAN59_RS01230	PF13007	Transposase C of IS166 homeodomain
AhaeAN59_RS01255	PF00589	Phage integrase family
AhaeAN59_RS01255	PF13356	Arm DNA-binding domain
AhaeAN59_RS01265	PF02705	K+ potassium transporter
AhaeAN59_RS01300	PF00977	Histidine biosynthesis protein
AhaeAN59_RS01305	PF01636	Phosphotransferase enzyme family
AhaeAN59_RS01330	PF00916	Sulfate permease family
AhaeAN59_RS01330	PF01740	STAS domain
AhaeAN59_RS01335	PF00977	Histidine biosynthesis protein
AhaeAN59_RS01345	PF00117	Glutamine amidotransferase class-I
AhaeAN59_RS01350	PF00475	Imidazoleglycerol-phosphate dehydratase
AhaeAN59_RS01380	PF02550	Acetyl-CoA hydrolase/transferase N-terminal domain
AhaeAN59_RS01380	PF13336	Acetyl-CoA hydrolase/transferase C-terminal domain
AhaeAN59_RS01385	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AhaeAN59_RS01385	PF00512	His Kinase A (phospho-acceptor) domain
AhaeAN59_RS01385	PF00672	HAMP domain
AhaeAN59_RS01390	PF00486	Transcriptional regulatory protein, C terminal
AhaeAN59_RS01390	PF00072	Response regulator receiver domain
AhaeAN59_RS01395	PF16921	Tex protein YqgF-like domain
AhaeAN59_RS01395	PF09371	Tex-like protein N-terminal domain
AhaeAN59_RS01395	PF00575	S1 RNA binding domain
AhaeAN59_RS01395	PF17674	HHH domain
AhaeAN59_RS01420	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_RS01420	PF03466	LysR substrate binding domain
AhaeAN59_RS01430	PF13411	MerR HTH family regulatory protein
AhaeAN59_RS01435	PF00550	Phosphopantetheine attachment site
AhaeAN59_RS01435	PF07993	Male sterility protein
AhaeAN59_RS01440	PF00106	short chain dehydrogenase
AhaeAN59_RS01445	PF01053	Cys/Met metabolism PLP-dependent enzyme
AhaeAN59_RS01450	PF12848	ABC transporter
AhaeAN59_RS01450	PF00005	ABC transporter
AhaeAN59_RS01470	PF04191	Phospholipid methyltransferase 
AhaeAN59_RS01485	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
AhaeAN59_RS01485	PF00529	HlyD membrane-fusion protein of T1SS
AhaeAN59_RS01490	PF00873	AcrB/AcrD/AcrF family
AhaeAN59_RS01495	PF01545	Cation efflux family
AhaeAN59_RS01575	PF01556	DnaJ C terminal domain
AhaeAN59_RS01575	PF00226	DnaJ domain
AhaeAN59_RS01575	PF00684	DnaJ central domain
AhaeAN59_RS01590	PF13737	Transposase DDE domain
AhaeAN59_RS01625	PF00324	Amino acid permease
AhaeAN59_RS01640	PF00749	tRNA synthetases class I (E and Q), catalytic domain
AhaeAN59_RS01665	PF01795	MraW methylase family
AhaeAN59_RS01675	PF03717	Penicillin-binding Protein dimerisation domain
AhaeAN59_RS01675	PF00905	Penicillin binding protein transpeptidase domain
AhaeAN59_RS01680	PF01225	Mur ligase family, catalytic domain
AhaeAN59_RS01680	PF08245	Mur ligase middle domain
AhaeAN59_RS01680	PF02875	Mur ligase family, glutamate ligase domain
AhaeAN59_RS01685	PF02875	Mur ligase family, glutamate ligase domain
AhaeAN59_RS01685	PF08245	Mur ligase middle domain
AhaeAN59_RS01685	PF01225	Mur ligase family, catalytic domain
AhaeAN59_RS01690	PF00953	Glycosyl transferase family 4
AhaeAN59_RS01695	PF13847	Methyltransferase domain
AhaeAN59_RS01700	PF17092	Penicillin-binding protein OB-like domain
AhaeAN59_RS01700	PF00912	Transglycosylase
AhaeAN59_RS01700	PF00905	Penicillin binding protein transpeptidase domain
AhaeAN59_RS01725	PF00263	Bacterial type II and III secretion system protein
AhaeAN59_RS01725	PF11741	AMIN domain
AhaeAN59_RS01725	PF03958	Bacterial type II/III secretion system short domain
AhaeAN59_RS01725	PF07660	Secretin and TonB N terminus short domain
AhaeAN59_RS01730	PF01202	Shikimate kinase
AhaeAN59_RS01735	PF01761	3-dehydroquinate synthase
AhaeAN59_RS01745	PF04898	Glutamate synthase central domain
AhaeAN59_RS01745	PF01493	GXGXG motif
AhaeAN59_RS01745	PF00310	Glutamine amidotransferases class-II
AhaeAN59_RS01745	PF01645	Conserved region in glutamate synthase
AhaeAN59_RS01750	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AhaeAN59_RS01750	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
AhaeAN59_RS01770	PF04011	LemA family
AhaeAN59_RS01775	PF04536	TPM domain
AhaeAN59_RS01785	PF04014	Antidote-toxin recognition MazE, bacterial antitoxin
AhaeAN59_RS01790	PF01850	PIN domain
AhaeAN59_RS01795	PF02661	Fic/DOC family
AhaeAN59_RS01795	PF13784	Fic/DOC family N-terminal
AhaeAN59_RS01800	PF07963	Prokaryotic N-terminal methylation motif
AhaeAN59_RS01800	PF00114	Pilin (bacterial filament)
AhaeAN59_RS01820	PF05685	Putative restriction endonuclease
AhaeAN59_RS01825	PF15864	Protein glycosylation ligase
AhaeAN59_RS01825	PF11846	Virulence factor membrane-bound polymerase, C-terminal
AhaeAN59_RS01825	PF04932	O-Antigen ligase
AhaeAN59_RS01830	PF00210	Ferritin-like domain
AhaeAN59_RS01835	PF04324	BFD-like [2Fe-2S] binding domain
AhaeAN59_RS01840	PF01042	Endoribonuclease L-PSP
AhaeAN59_RS01845	PF04607	Region found in RelA / SpoT proteins
AhaeAN59_RS01845	PF02824	TGS domain
AhaeAN59_RS01845	PF13291	ACT domain
AhaeAN59_RS01850	PF01192	RNA polymerase Rpb6 
AhaeAN59_RS01855	PF00625	Guanylate kinase
AhaeAN59_RS01860	PF02401	LytB protein
AhaeAN59_RS01865	PF07963	Prokaryotic N-terminal methylation motif
AhaeAN59_RS01925	PF00114	Pilin (bacterial filament)
AhaeAN59_RS01925	PF07963	Prokaryotic N-terminal methylation motif
AhaeAN59_RS01930	PF00886	Ribosomal protein S16
AhaeAN59_RS01935	PF01782	RimM N-terminal domain
AhaeAN59_RS01935	PF05239	PRC-barrel domain
AhaeAN59_RS01940	PF01746	tRNA (Guanine-1)-methyltransferase
AhaeAN59_RS01945	PF01245	Ribosomal protein L19
AhaeAN59_RS01950	PF00561	alpha/beta hydrolase fold
AhaeAN59_RS01955	PF03280	Proteobacterial lipase chaperone protein
AhaeAN59_RS01960	PF01509	TruB family pseudouridylate synthase (N terminal domain)
AhaeAN59_RS01960	PF16198	tRNA pseudouridylate synthase B C-terminal domain
AhaeAN59_RS01960	PF09157	Pseudouridine synthase II TruB, C-terminal
AhaeAN59_RS01965	PF01925	Sulfite exporter TauE/SafE
AhaeAN59_RS01975	PF00892	EamA-like transporter family
AhaeAN59_RS01980	PF00892	EamA-like transporter family
AhaeAN59_RS01985	PF01464	Transglycosylase SLT domain
AhaeAN59_RS01985	PF10145	Phage-related minor tail protein
AhaeAN59_RS01985	PF01551	Peptidase family M23
AhaeAN59_RS01990	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AhaeAN59_RS01990	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
AhaeAN59_RS01995	PF02913	FAD linked oxidases, C-terminal domain
AhaeAN59_RS01995	PF01565	FAD binding domain 
AhaeAN59_RS02010	PF03992	Antibiotic biosynthesis monooxygenase
AhaeAN59_RS02015	PF02525	Flavodoxin-like fold
AhaeAN59_RS02030	PF07690	Major Facilitator Superfamily
AhaeAN59_RS02035	PF12805	FUSC-like inner membrane protein yccS
AhaeAN59_RS02040	PF01594	AI-2E family transporter
AhaeAN59_RS02045	PF13614	AAA domain
AhaeAN59_RS02055	PF01209	ubiE/COQ5 methyltransferase family
AhaeAN59_RS02070	PF08241	Methyltransferase domain
AhaeAN59_RS02095	PF00743	Flavin-binding monooxygenase-like
AhaeAN59_RS02105	PF06470	SMC proteins Flexible Hinge Domain
AhaeAN59_RS02105	PF02463	RecF/RecN/SMC N terminal domain
AhaeAN59_RS02115	PF02092	Glycyl-tRNA synthetase beta subunit
AhaeAN59_RS02115	PF05746	DALR anticodon binding domain
AhaeAN59_RS02120	PF02091	Glycyl-tRNA synthetase alpha subunit
AhaeAN59_RS02135	PF00939	Sodium:sulfate symporter transmembrane region
AhaeAN59_RS02150	PF04024	PspC domain
AhaeAN59_RS02160	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AhaeAN59_RS02160	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AhaeAN59_RS02160	PF12806	Acetyl-CoA dehydrogenase C-terminal like
AhaeAN59_RS02160	PF02770	Acyl-CoA dehydrogenase, middle domain
AhaeAN59_RS02170	PF08501	Shikimate dehydrogenase substrate binding domain
AhaeAN59_RS02170	PF18317	Shikimate 5'-dehydrogenase C-terminal domain
AhaeAN59_RS02170	PF01488	Shikimate / quinate 5-dehydrogenase
AhaeAN59_RS02175	PF01850	PIN domain
AhaeAN59_RS02190	PF00925	GTP cyclohydrolase II
AhaeAN59_RS02195	PF02780	Transketolase, C-terminal domain
AhaeAN59_RS02195	PF13292	1-deoxy-D-xylulose-5-phosphate synthase
AhaeAN59_RS02195	PF02779	Transketolase, pyrimidine binding domain
AhaeAN59_RS02200	PF00459	Inositol monophosphatase family
AhaeAN59_RS02210	PF00271	Helicase conserved C-terminal domain
AhaeAN59_RS02210	PF03880	DbpA RNA binding domain   
AhaeAN59_RS02210	PF12343	Cold shock protein DEAD box A
AhaeAN59_RS02210	PF00270	DEAD/DEAH box helicase
AhaeAN59_RS02220	PF00005	ABC transporter
AhaeAN59_RS02225	PF02405	Permease MlaE
AhaeAN59_RS02230	PF02470	MlaD protein
AhaeAN59_RS02235	PF05494	MlaC protein
AhaeAN59_RS02250	PF01544	CorA-like Mg2+ transporter protein
AhaeAN59_RS02255	PF03641	Possible lysine decarboxylase
AhaeAN59_RS02265	PF00156	Phosphoribosyl transferase domain
AhaeAN59_RS02270	PF17191	RecG wedge domain
AhaeAN59_RS02270	PF00271	Helicase conserved C-terminal domain
AhaeAN59_RS02270	PF00270	DEAD/DEAH box helicase
AhaeAN59_RS02290	PF01553	Acyltransferase
AhaeAN59_RS02300	PF00375	Sodium:dicarboxylate symporter family
AhaeAN59_RS02315	PF01926	50S ribosome-binding GTPase
AhaeAN59_RS02320	PF02082	Transcriptional regulator
AhaeAN59_RS02325	PF00175	Oxidoreductase NAD-binding domain 
AhaeAN59_RS02325	PF00042	Globin
AhaeAN59_RS02325	PF00970	Oxidoreductase FAD-binding domain
AhaeAN59_RS02330	PF05872	Bacterial protein of unknown function (DUF853)
AhaeAN59_RS02335	PF01053	Cys/Met metabolism PLP-dependent enzyme
AhaeAN59_RS02340	PF00117	Glutamine amidotransferase class-I
AhaeAN59_RS02345	PF00338	Ribosomal protein S10p/S20e
AhaeAN59_RS02350	PF00297	Ribosomal protein L3
AhaeAN59_RS02355	PF00573	Ribosomal protein L4/L1 family
AhaeAN59_RS02360	PF00276	Ribosomal protein L23
AhaeAN59_RS02365	PF03947	Ribosomal Proteins L2, C-terminal domain
AhaeAN59_RS02365	PF00181	Ribosomal Proteins L2, RNA binding domain
AhaeAN59_RS02370	PF00203	Ribosomal protein S19
AhaeAN59_RS02375	PF00237	Ribosomal protein L22p/L17e
AhaeAN59_RS02380	PF07650	KH domain
AhaeAN59_RS02380	PF00189	Ribosomal protein S3, C-terminal domain
AhaeAN59_RS02385	PF00252	Ribosomal protein L16p/L10e
AhaeAN59_RS02390	PF00831	Ribosomal L29 protein
AhaeAN59_RS02395	PF00366	Ribosomal protein S17
AhaeAN59_RS02400	PF00238	Ribosomal protein L14p/L23e
AhaeAN59_RS02405	PF17136	Ribosomal proteins 50S L24/mitochondrial 39S L24
AhaeAN59_RS02405	PF00467	KOW motif
AhaeAN59_RS02410	PF00673	ribosomal L5P family C-terminus
AhaeAN59_RS02410	PF00281	Ribosomal protein L5
AhaeAN59_RS02415	PF00253	Ribosomal protein S14p/S29e
AhaeAN59_RS02420	PF00410	Ribosomal protein S8
AhaeAN59_RS02425	PF00347	Ribosomal protein L6
AhaeAN59_RS02430	PF00861	Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
AhaeAN59_RS02435	PF03719	Ribosomal protein S5, C-terminal domain
AhaeAN59_RS02435	PF00333	Ribosomal protein S5, N-terminal domain
AhaeAN59_RS02440	PF00327	Ribosomal protein L30p/L7e
AhaeAN59_RS02445	PF00828	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
AhaeAN59_RS02450	PF00344	SecY translocase
AhaeAN59_RS02455	PF00444	Ribosomal protein L36
AhaeAN59_RS02460	PF00416	Ribosomal protein S13/S18
AhaeAN59_RS02465	PF00411	Ribosomal protein S11
AhaeAN59_RS02470	PF01479	S4 domain
AhaeAN59_RS02470	PF00163	Ribosomal protein S4/S9 N-terminal domain
AhaeAN59_RS02475	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
AhaeAN59_RS02475	PF01000	RNA polymerase Rpb3/RpoA insert domain
AhaeAN59_RS02475	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
AhaeAN59_RS02480	PF01196	Ribosomal protein L17
AhaeAN59_RS02490	PF00743	Flavin-binding monooxygenase-like
AhaeAN59_RS02500	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AhaeAN59_RS02500	PF02770	Acyl-CoA dehydrogenase, middle domain
AhaeAN59_RS02500	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AhaeAN59_RS02505	PF03937	Flavinator of succinate dehydrogenase
AhaeAN59_RS02530	PF06808	Tripartite ATP-independent periplasmic transporter, DctM component
AhaeAN59_RS02535	PF10077	Uncharacterized protein conserved in bacteria (DUF2314)
AhaeAN59_RS02555	PF01432	Peptidase family M3
AhaeAN59_RS02565	PF08461	Ribonuclease R winged-helix domain
AhaeAN59_RS02565	PF08206	Ribonuclease B OB domain
AhaeAN59_RS02565	PF00773	RNB domain
AhaeAN59_RS02565	PF17876	Cold shock domain
AhaeAN59_RS02565	PF00575	S1 RNA binding domain
AhaeAN59_RS02595	PF01557	Fumarylacetoacetate (FAA) hydrolase family
AhaeAN59_RS02600	PF03631	Virulence factor BrkB
AhaeAN59_RS02605	PF03358	NADPH-dependent FMN reductase
AhaeAN59_RS02615	PF01790	Prolipoprotein diacylglyceryl transferase
AhaeAN59_RS02625	PF00245	Alkaline phosphatase
AhaeAN59_RS02645	PF00902	Sec-independent protein translocase protein (TatC)
AhaeAN59_RS02650	PF02416	mttA/Hcf106 family
AhaeAN59_RS02655	PF02416	mttA/Hcf106 family
AhaeAN59_RS02665	PF01725	Ham1 family
AhaeAN59_RS02685	PF07021	Methionine biosynthesis protein MetW
AhaeAN59_RS02685	PF00561	alpha/beta hydrolase fold
AhaeAN59_RS02690	PF00561	alpha/beta hydrolase fold
AhaeAN59_RS02695	PF00682	HMGL-like
AhaeAN59_RS02695	PF08502	LeuA allosteric (dimerisation) domain
AhaeAN59_RS02700	PF07715	TonB-dependent Receptor Plug Domain
AhaeAN59_RS02700	PF00593	TonB dependent receptor
AhaeAN59_RS02705	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AhaeAN59_RS02705	PF05698	Bacterial trigger factor protein (TF) C-terminus
AhaeAN59_RS02705	PF05697	Bacterial trigger factor protein (TF)
AhaeAN59_RS02710	PF00574	Clp protease
AhaeAN59_RS02715	PF06689	ClpX C4-type zinc finger
AhaeAN59_RS02715	PF10431	C-terminal, D2-small domain, of ClpB protein 
AhaeAN59_RS02715	PF07724	AAA domain (Cdc48 subfamily)
AhaeAN59_RS02730	PF05683	Fumarase C-terminus
AhaeAN59_RS02730	PF05681	Fumarate hydratase (Fumerase)
AhaeAN59_RS02735	PF12833	Helix-turn-helix domain
AhaeAN59_RS02735	PF02311	AraC-like ligand binding domain
AhaeAN59_RS02755	PF01515	Phosphate acetyl/butaryl transferase
AhaeAN59_RS02755	PF07085	DRTGG domain
AhaeAN59_RS02760	PF00871	Acetokinase family
AhaeAN59_RS02765	PF00171	Aldehyde dehydrogenase family
AhaeAN59_RS02780	PF00933	Glycosyl hydrolase family 3 N terminal domain
AhaeAN59_RS02785	PF11818	C-terminal domain of tail specific protease (DUF3340)
AhaeAN59_RS02785	PF17804	Tail specific protease N-terminal domain
AhaeAN59_RS02785	PF00595	PDZ domain
AhaeAN59_RS02785	PF03572	Peptidase family S41
AhaeAN59_RS02805	PF13167	GTP-binding GTPase N-terminal
AhaeAN59_RS02805	PF01926	50S ribosome-binding GTPase
AhaeAN59_RS02805	PF16360	GTP-binding GTPase Middle Region
AhaeAN59_RS02820	PF13091	PLD-like domain
AhaeAN59_RS02825	PF10518	TAT (twin-arginine translocation) pathway signal sequence
AhaeAN59_RS02825	PF00149	Calcineurin-like phosphoesterase
AhaeAN59_RS02830	PF00691	OmpA family
AhaeAN59_RS02830	PF01389	OmpA-like transmembrane domain
AhaeAN59_RS02835	PF00990	Diguanylate cyclase, GGDEF domain
AhaeAN59_RS02835	PF17152	Periplasmic sensor domain
AhaeAN59_RS02870	PF01594	AI-2E family transporter
AhaeAN59_RS02875	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AhaeAN59_RS02875	PF02770	Acyl-CoA dehydrogenase, middle domain
AhaeAN59_RS02875	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AhaeAN59_RS02885	PF13302	Acetyltransferase (GNAT) domain
AhaeAN59_RS02890	PF17932	Tetracyclin repressor-like, C-terminal domain
AhaeAN59_RS02890	PF00440	Bacterial regulatory proteins, tetR family
AhaeAN59_RS02905	PF01039	Carboxyl transferase domain
AhaeAN59_RS02910	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AhaeAN59_RS02910	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AhaeAN59_RS02910	PF02770	Acyl-CoA dehydrogenase, middle domain
AhaeAN59_RS02920	PF00289	Biotin carboxylase, N-terminal domain
AhaeAN59_RS02920	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
AhaeAN59_RS02920	PF00364	Biotin-requiring enzyme
AhaeAN59_RS02920	PF02785	Biotin carboxylase C-terminal domain
AhaeAN59_RS02935	PF03372	Endonuclease/Exonuclease/phosphatase family
AhaeAN59_RS02995	PF04386	Stringent starvation protein B
AhaeAN59_RS03000	PF02798	Glutathione S-transferase, N-terminal domain
AhaeAN59_RS03000	PF00043	Glutathione S-transferase, C-terminal domain
AhaeAN59_RS03005	PF00380	Ribosomal protein S9/S16
AhaeAN59_RS03010	PF00572	Ribosomal protein L13
AhaeAN59_RS03020	PF04166	Pyridoxal phosphate biosynthetic protein PdxA
AhaeAN59_RS03025	PF00398	Ribosomal RNA adenine dimethylase
AhaeAN59_RS03030	PF00149	Calcineurin-like phosphoesterase
AhaeAN59_RS03035	PF00534	Glycosyl transferases group 1
AhaeAN59_RS03035	PF13439	Glycosyltransferase Family 4
AhaeAN59_RS03040	PF01569	PAP2 superfamily
AhaeAN59_RS03045	PF04384	Iron-sulphur cluster assembly
AhaeAN59_RS03050	PF00334	Nucleoside diphosphate kinase
AhaeAN59_RS03055	PF04055	Radical SAM superfamily
AhaeAN59_RS03065	PF13464	Domain of unknown function (DUF4115)
AhaeAN59_RS03070	PF04551	GcpE protein
AhaeAN59_RS03075	PF03129	Anticodon binding domain
AhaeAN59_RS03075	PF13393	Histidyl-tRNA synthetase
AhaeAN59_RS03085	PF13360	PQQ-like domain
AhaeAN59_RS03090	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
AhaeAN59_RS03090	PF01926	50S ribosome-binding GTPase
AhaeAN59_RS03100	PF07549	SecD/SecF GG Motif
AhaeAN59_RS03100	PF02355	Protein export membrane protein
AhaeAN59_RS03105	PF02355	Protein export membrane protein
AhaeAN59_RS03105	PF13721	SecD export protein N-terminal TM region
AhaeAN59_RS03105	PF07549	SecD/SecF GG Motif
AhaeAN59_RS03110	PF02699	Preprotein translocase subunit
AhaeAN59_RS03115	PF01702	Queuine tRNA-ribosyltransferase
AhaeAN59_RS03135	PF02547	Queuosine biosynthesis protein
AhaeAN59_RS03145	PF00672	HAMP domain
AhaeAN59_RS03145	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AhaeAN59_RS03145	PF18698	Histidine kinase sensor domain
AhaeAN59_RS03145	PF00512	His Kinase A (phospho-acceptor) domain
AhaeAN59_RS03150	PF03710	Glutamate-ammonia ligase adenylyltransferase
AhaeAN59_RS03150	PF08335	GlnD PII-uridylyltransferase
AhaeAN59_RS03155	PF01063	Amino-transferase class IV
AhaeAN59_RS03160	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
AhaeAN59_RS03160	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
AhaeAN59_RS03160	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
AhaeAN59_RS03170	PF00534	Glycosyl transferases group 1
AhaeAN59_RS03170	PF11380	Stealth protein CR2, conserved region 2
AhaeAN59_RS03170	PF17102	Stealth protein CR3, conserved region 3
AhaeAN59_RS03170	PF17103	Stealth protein CR4, conserved region 4
AhaeAN59_RS03170	PF17101	Stealth protein CR1, conserved region 1
AhaeAN59_RS03200	PF13737	Transposase DDE domain
AhaeAN59_RS03215	PF01755	Glycosyltransferase family 25 (LPS biosynthesis protein)
AhaeAN59_RS03235	PF13817	IS66 C-terminal element
AhaeAN59_RS03235	PF13005	zinc-finger binding domain of transposase IS66 
AhaeAN59_RS03235	PF13007	Transposase C of IS166 homeodomain
AhaeAN59_RS03235	PF03050	Transposase IS66 family 
AhaeAN59_RS03250	PF00152	tRNA synthetases class II (D, K and N) 
AhaeAN59_RS03250	PF01336	OB-fold nucleic acid binding domain
AhaeAN59_RS03250	PF02938	GAD domain
AhaeAN59_RS03260	PF07715	TonB-dependent Receptor Plug Domain
AhaeAN59_RS03260	PF00593	TonB dependent receptor
AhaeAN59_RS03285	PF06146	Phosphate-starvation-inducible E
AhaeAN59_RS03290	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AhaeAN59_RS03290	PF02770	Acyl-CoA dehydrogenase, middle domain
AhaeAN59_RS03290	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AhaeAN59_RS03290	PF12806	Acetyl-CoA dehydrogenase C-terminal like
AhaeAN59_RS03295	PF12806	Acetyl-CoA dehydrogenase C-terminal like
AhaeAN59_RS03295	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AhaeAN59_RS03295	PF02770	Acyl-CoA dehydrogenase, middle domain
AhaeAN59_RS03295	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AhaeAN59_RS03305	PF00512	His Kinase A (phospho-acceptor) domain
AhaeAN59_RS03305	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AhaeAN59_RS03305	PF00672	HAMP domain
AhaeAN59_RS03310	PF00486	Transcriptional regulatory protein, C terminal
AhaeAN59_RS03310	PF00072	Response regulator receiver domain
AhaeAN59_RS03345	PF01923	Cobalamin adenosyltransferase
AhaeAN59_RS03350	PF00593	TonB dependent receptor
AhaeAN59_RS03350	PF07715	TonB-dependent Receptor Plug Domain
AhaeAN59_RS03355	PF00697	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
AhaeAN59_RS03360	PF00291	Pyridoxal-phosphate dependent enzyme
AhaeAN59_RS03365	PF00149	Calcineurin-like phosphoesterase
AhaeAN59_RS03390	PF00290	Tryptophan synthase alpha chain
AhaeAN59_RS03395	PF01039	Carboxyl transferase domain
AhaeAN59_RS03400	PF02875	Mur ligase family, glutamate ligase domain
AhaeAN59_RS03400	PF08245	Mur ligase middle domain
AhaeAN59_RS03415	PF10417	C-terminal domain of 1-Cys peroxiredoxin
AhaeAN59_RS03415	PF00578	AhpC/TSA family
AhaeAN59_RS03420	PF02810	SEC-C motif
AhaeAN59_RS03420	PF07517	SecA DEAD-like domain
AhaeAN59_RS03420	PF07516	SecA Wing and Scaffold domain
AhaeAN59_RS03420	PF01043	SecA preprotein cross-linking domain
AhaeAN59_RS03435	PF07690	Major Facilitator Superfamily
AhaeAN59_RS03435	PF00083	Sugar (and other) transporter
AhaeAN59_RS03440	PF03006	Haemolysin-III related
AhaeAN59_RS03450	PF13673	Acetyltransferase (GNAT) domain
AhaeAN59_RS03470	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
AhaeAN59_RS03470	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
AhaeAN59_RS03470	PF00378	Enoyl-CoA hydratase/isomerase
AhaeAN59_RS03475	PF00108	Thiolase, N-terminal domain
AhaeAN59_RS03475	PF02803	Thiolase, C-terminal domain
AhaeAN59_RS03490	PF02311	AraC-like ligand binding domain
AhaeAN59_RS03490	PF12833	Helix-turn-helix domain
AhaeAN59_RS03495	PF02515	CoA-transferase family III
AhaeAN59_RS03500	PF04966	Carbohydrate-selective porin, OprB family
AhaeAN59_RS03505	PF01011	PQQ enzyme repeat
AhaeAN59_RS03510	PF16671	Actin cross-linking domain
AhaeAN59_RS03510	PF04717	Type VI secretion system, phage-baseplate injector
AhaeAN59_RS03520	PF13737	Transposase DDE domain
AhaeAN59_RS03535	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
AhaeAN59_RS03535	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
AhaeAN59_RS03550	PF02803	Thiolase, C-terminal domain
AhaeAN59_RS03550	PF00108	Thiolase, N-terminal domain
AhaeAN59_RS03560	PF00691	OmpA family
AhaeAN59_RS03560	PF13505	Outer membrane protein beta-barrel domain
AhaeAN59_RS03565	PF13505	Outer membrane protein beta-barrel domain
AhaeAN59_RS03565	PF00691	OmpA family
AhaeAN59_RS03570	PF01139	tRNA-splicing ligase RtcB
AhaeAN59_RS03575	PF00324	Amino acid permease
AhaeAN59_RS03580	PF08468	Methyltransferase small domain N-terminal
AhaeAN59_RS03580	PF05175	Methyltransferase small domain
AhaeAN59_RS03585	PF00860	Permease family
AhaeAN59_RS03595	PF01741	Large-conductance mechanosensitive channel, MscL
AhaeAN59_RS03605	PF03050	Transposase IS66 family 
AhaeAN59_RS03605	PF13817	IS66 C-terminal element
AhaeAN59_RS03605	PF13007	Transposase C of IS166 homeodomain
AhaeAN59_RS03605	PF13005	zinc-finger binding domain of transposase IS66 
AhaeAN59_RS03620	PF00639	PPIC-type PPIASE domain
AhaeAN59_RS03620	PF09312	SurA N-terminal domain
AhaeAN59_RS03625	PF01149	Formamidopyrimidine-DNA glycosylase N-terminal domain
AhaeAN59_RS03625	PF06831	Formamidopyrimidine-DNA glycosylase H2TH domain
AhaeAN59_RS03625	PF06827	Zinc finger found in FPG and IleRS
AhaeAN59_RS03630	PF07715	TonB-dependent Receptor Plug Domain
AhaeAN59_RS03630	PF00593	TonB dependent receptor
AhaeAN59_RS03640	PF01571	Aminomethyltransferase folate-binding domain
AhaeAN59_RS03650	PF08274	PhnA Zinc-Ribbon 
AhaeAN59_RS03650	PF03831	PhnA domain
AhaeAN59_RS03655	PF07411	Domain of unknown function (DUF1508)
AhaeAN59_RS03660	PF04073	Aminoacyl-tRNA editing domain
AhaeAN59_RS03660	PF03129	Anticodon binding domain
AhaeAN59_RS03660	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
AhaeAN59_RS03670	PF00072	Response regulator receiver domain
AhaeAN59_RS03675	PF00072	Response regulator receiver domain
AhaeAN59_RS03680	PF01584	CheW-like domain
AhaeAN59_RS03685	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AhaeAN59_RS03685	PF13675	Type IV pili methyl-accepting chemotaxis transducer N-term
AhaeAN59_RS03690	PF01627	Hpt domain
AhaeAN59_RS03690	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AhaeAN59_RS03690	PF02895	Signal transducing histidine kinase, homodimeric domain
AhaeAN59_RS03690	PF02895	Signal transducing histidine kinase, homodimeric domain
AhaeAN59_RS03690	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AhaeAN59_RS03690	PF01627	Hpt domain
AhaeAN59_RS03690	PF07194	P2 response regulator binding domain
AhaeAN59_RS03690	PF01584	CheW-like domain
AhaeAN59_RS03690	PF01584	CheW-like domain
AhaeAN59_RS03690	PF07194	P2 response regulator binding domain
AhaeAN59_RS03700	PF07687	Peptidase dimerisation domain
AhaeAN59_RS03700	PF01546	Peptidase family M20/M25/M40
AhaeAN59_RS03705	PF08085	Entericidin EcnA/B family
AhaeAN59_RS03715	PF04304	Protein of unknown function (DUF454)
AhaeAN59_RS03720	PF03734	L,D-transpeptidase catalytic domain
AhaeAN59_RS03720	PF17969	L,D-transpeptidase C-terminal domain
AhaeAN59_RS03765	PF00667	FAD binding domain
AhaeAN59_RS03765	PF00175	Oxidoreductase NAD-binding domain 
AhaeAN59_RS03765	PF00258	Flavodoxin
AhaeAN59_RS03770	PF00155	Aminotransferase class I and II
AhaeAN59_RS03775	PF06826	Predicted Permease Membrane Region
AhaeAN59_RS03775	PF02080	TrkA-C domain
AhaeAN59_RS03785	PF12805	FUSC-like inner membrane protein yccS
AhaeAN59_RS03790	PF07690	Major Facilitator Superfamily
AhaeAN59_RS03795	PF00881	Nitroreductase family
AhaeAN59_RS03805	PF03616	Sodium/glutamate symporter
AhaeAN59_RS03810	PF01235	Sodium:alanine symporter family
AhaeAN59_RS03815	PF01734	Patatin-like phospholipase
AhaeAN59_RS03820	PF05992	SbmA/BacA-like family
AhaeAN59_RS03835	PF03466	LysR substrate binding domain
AhaeAN59_RS03835	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_RS03885	PF02637	GatB domain
AhaeAN59_RS03885	PF02934	GatB/GatE catalytic domain
AhaeAN59_RS03890	PF01425	Amidase
AhaeAN59_RS03895	PF02686	Glu-tRNAGln amidotransferase C subunit
AhaeAN59_RS03905	PF04085	rod shape-determining protein MreC
AhaeAN59_RS03915	PF02545	Maf-like protein
AhaeAN59_RS03920	PF10150	Ribonuclease E/G family
AhaeAN59_RS03920	PF00575	S1 RNA binding domain
AhaeAN59_RS03930	PF06974	Protein of unknown function (DUF1298)
AhaeAN59_RS03930	PF03007	Wax ester synthase-like Acyl-CoA acyltransferase domain
AhaeAN59_RS03935	PF01507	Phosphoadenosine phosphosulfate reductase family
AhaeAN59_RS03955	PF00171	Aldehyde dehydrogenase family
AhaeAN59_RS03960	PF01569	PAP2 superfamily
AhaeAN59_RS03970	PF00111	2Fe-2S iron-sulfur cluster binding domain
AhaeAN59_RS03970	PF00175	Oxidoreductase NAD-binding domain 
AhaeAN59_RS03975	PF00355	Rieske [2Fe-2S] domain
AhaeAN59_RS03980	PF07690	Major Facilitator Superfamily
AhaeAN59_RS03985	PF03573	outer membrane porin, OprD family
AhaeAN59_RS03995	PF00324	Amino acid permease
AhaeAN59_RS04000	PF04303	PrpF protein
AhaeAN59_RS04005	PF00348	Polyprenyl synthetase
AhaeAN59_RS04010	PF01145	SPFH domain / Band 7 family
AhaeAN59_RS04020	PF01734	Patatin-like phospholipase
AhaeAN59_RS04075	PF03237	Terminase-like family
AhaeAN59_RS04100	PF00884	Sulfatase
AhaeAN59_RS04100	PF08019	Phosphoethanolamine transferase EptA/EptB
AhaeAN59_RS04105	PF00486	Transcriptional regulatory protein, C terminal
AhaeAN59_RS04105	PF00072	Response regulator receiver domain
AhaeAN59_RS04110	PF00512	His Kinase A (phospho-acceptor) domain
AhaeAN59_RS04110	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AhaeAN59_RS04110	PF08521	Two-component sensor kinase N-terminal
AhaeAN59_RS04120	PF00005	ABC transporter
AhaeAN59_RS04125	PF00528	Binding-protein-dependent transport system inner membrane component
AhaeAN59_RS04130	PF00528	Binding-protein-dependent transport system inner membrane component
AhaeAN59_RS04135	PF00497	Bacterial extracellular solute-binding proteins, family 3
AhaeAN59_RS04140	PF00909	Ammonium Transporter Family
AhaeAN59_RS04160	PF00133	tRNA synthetases class I (I, L, M and V)
AhaeAN59_RS04160	PF10458	Valyl tRNA synthetase tRNA binding arm
AhaeAN59_RS04160	PF08264	Anticodon-binding domain of tRNA
AhaeAN59_RS04185	PF01906	Putative heavy-metal-binding
AhaeAN59_RS04190	PF01906	Putative heavy-metal-binding
AhaeAN59_RS04195	PF02321	Outer membrane efflux protein
AhaeAN59_RS04200	PF00873	AcrB/AcrD/AcrF family
AhaeAN59_RS04205	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
AhaeAN59_RS04205	PF00529	HlyD membrane-fusion protein of T1SS
AhaeAN59_RS04210	PF01569	PAP2 superfamily
AhaeAN59_RS04220	PF00348	Polyprenyl synthetase
AhaeAN59_RS04225	PF00829	Ribosomal prokaryotic L21 protein
AhaeAN59_RS04230	PF01016	Ribosomal L27 protein
AhaeAN59_RS04235	PF05726	Pirin C-terminal cupin domain
AhaeAN59_RS04235	PF02678	Pirin
AhaeAN59_RS04240	PF03548	Outer membrane lipoprotein carrier protein LolA
AhaeAN59_RS04250	PF02403	Seryl-tRNA synthetase N-terminal domain
AhaeAN59_RS04250	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
AhaeAN59_RS04255	PF14824	Sirohaem biosynthesis protein central
AhaeAN59_RS04255	PF10414	Sirohaem synthase dimerisation region
AhaeAN59_RS04255	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
AhaeAN59_RS04260	PF00588	SpoU rRNA Methylase family
AhaeAN59_RS04270	PF01638	HxlR-like helix-turn-helix
AhaeAN59_RS04275	PF03358	NADPH-dependent FMN reductase
AhaeAN59_RS04280	PF13520	Amino acid permease
AhaeAN59_RS04285	PF00465	Iron-containing alcohol dehydrogenase 
AhaeAN59_RS04295	PF03099	Biotin/lipoate A/B protein ligase family
AhaeAN59_RS04300	PF04359	Protein of unknown function (DUF493)
AhaeAN59_RS04305	PF00140	Sigma-70 factor, region 1.2
AhaeAN59_RS04305	PF03979	Sigma-70 factor, region 1.1
AhaeAN59_RS04305	PF04546	Sigma-70, non-essential region
AhaeAN59_RS04305	PF04542	Sigma-70 region 2 
AhaeAN59_RS04305	PF04545	Sigma-70, region 4
AhaeAN59_RS04305	PF04539	Sigma-70 region 3
AhaeAN59_RS04320	PF01810	LysE type translocator
AhaeAN59_RS04325	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_RS04325	PF03466	LysR substrate binding domain
AhaeAN59_RS04330	PF05724	Thiopurine S-methyltransferase (TPMT)
AhaeAN59_RS04335	PF09335	SNARE associated Golgi protein
AhaeAN59_RS04350	PF00285	Citrate synthase, C-terminal domain
AhaeAN59_RS04355	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
AhaeAN59_RS04360	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
AhaeAN59_RS04365	PF00890	FAD binding domain
AhaeAN59_RS04365	PF02910	Fumarate reductase flavoprotein C-term
AhaeAN59_RS04370	PF13085	2Fe-2S iron-sulfur cluster binding domain
AhaeAN59_RS04380	PF16078	2-oxoglutarate dehydrogenase N-terminus
AhaeAN59_RS04380	PF00676	Dehydrogenase E1 component
AhaeAN59_RS04380	PF16870	2-oxoglutarate dehydrogenase C-terminal
AhaeAN59_RS04380	PF02779	Transketolase, pyrimidine binding domain
AhaeAN59_RS04385	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
AhaeAN59_RS04385	PF00364	Biotin-requiring enzyme
AhaeAN59_RS04385	PF02817	e3 binding domain
AhaeAN59_RS04390	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AhaeAN59_RS04390	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AhaeAN59_RS04395	PF00549	CoA-ligase
AhaeAN59_RS04395	PF08442	ATP-grasp domain
AhaeAN59_RS04400	PF02629	CoA binding domain
AhaeAN59_RS04400	PF00549	CoA-ligase
AhaeAN59_RS04405	PF15975	Flotillin
AhaeAN59_RS04405	PF01145	SPFH domain / Band 7 family
AhaeAN59_RS04410	PF07290	Protein of unknown function (DUF1449)
AhaeAN59_RS04415	PF00579	tRNA synthetases class I (W and Y)
AhaeAN59_RS04420	PF05661	Protein of unknown function (DUF808)
AhaeAN59_RS04425	PF04228	Putative neutral zinc metallopeptidase
AhaeAN59_RS04435	PF13737	Transposase DDE domain
AhaeAN59_RS04455	PF02875	Mur ligase family, glutamate ligase domain
AhaeAN59_RS04455	PF01225	Mur ligase family, catalytic domain
AhaeAN59_RS04455	PF08245	Mur ligase middle domain
AhaeAN59_RS04460	PF13737	Transposase DDE domain
AhaeAN59_RS04465	PF01225	Mur ligase family, catalytic domain
AhaeAN59_RS04465	PF02875	Mur ligase family, glutamate ligase domain
AhaeAN59_RS04465	PF08245	Mur ligase middle domain
AhaeAN59_RS04475	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
AhaeAN59_RS04485	PF00132	Bacterial transferase hexapeptide (six repeats)
AhaeAN59_RS04495	PF01272	Transcription elongation factor, GreA/GreB, C-term
AhaeAN59_RS04495	PF03449	Transcription elongation factor, N-terminal
AhaeAN59_RS04500	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AhaeAN59_RS04500	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
AhaeAN59_RS04500	PF02142	MGS-like domain
AhaeAN59_RS04505	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
AhaeAN59_RS04505	PF00117	Glutamine amidotransferase class-I
AhaeAN59_RS04520	PF01985	CRS1 / YhbY (CRM) domain
AhaeAN59_RS04525	PF01728	FtsJ-like methyltransferase
AhaeAN59_RS04530	PF01434	Peptidase family M41
AhaeAN59_RS04530	PF06480	FtsH Extracellular
AhaeAN59_RS04530	PF17862	AAA+ lid domain
AhaeAN59_RS04530	PF00004	ATPase family associated with various cellular activities (AAA)
AhaeAN59_RS04535	PF00809	Pterin binding enzyme
AhaeAN59_RS04545	PF00092	von Willebrand factor type A domain
AhaeAN59_RS04545	PF12450	von Willebrand factor 
AhaeAN59_RS04545	PF12034	Domain of unknown function (DUF3520)
AhaeAN59_RS04555	PF00561	alpha/beta hydrolase fold
AhaeAN59_RS04565	PF04973	Nicotinamide mononucleotide transporter
AhaeAN59_RS04570	PF03009	Glycerophosphoryl diester phosphodiesterase family
AhaeAN59_RS04580	PF00884	Sulfatase
AhaeAN59_RS04585	PF00873	AcrB/AcrD/AcrF family
AhaeAN59_RS04590	PF01769	Divalent cation transporter
AhaeAN59_RS04590	PF00571	CBS domain
AhaeAN59_RS04590	PF03448	MgtE intracellular N domain
AhaeAN59_RS04600	PF01435	Peptidase family M48
AhaeAN59_RS04605	PF01464	Transglycosylase SLT domain
AhaeAN59_RS04605	PF01551	Peptidase family M23
AhaeAN59_RS04605	PF10145	Phage-related minor tail protein
AhaeAN59_RS04610	PF01171	PP-loop family
AhaeAN59_RS04620	PF00497	Bacterial extracellular solute-binding proteins, family 3
AhaeAN59_RS04620	PF01464	Transglycosylase SLT domain
AhaeAN59_RS04625	PF01272	Transcription elongation factor, GreA/GreB, C-term
AhaeAN59_RS04625	PF03449	Transcription elongation factor, N-terminal
AhaeAN59_RS04635	PF00375	Sodium:dicarboxylate symporter family
AhaeAN59_RS04640	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_RS04640	PF03466	LysR substrate binding domain
AhaeAN59_RS04645	PF10415	Fumarase C C-terminus
AhaeAN59_RS04645	PF00206	Lyase
AhaeAN59_RS04755	PF00691	OmpA family
AhaeAN59_RS04755	PF04972	BON domain
AhaeAN59_RS04770	PF00528	Binding-protein-dependent transport system inner membrane component
AhaeAN59_RS04775	PF03459	TOBE domain
AhaeAN59_RS04775	PF00005	ABC transporter
AhaeAN59_RS04785	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
AhaeAN59_RS04790	PF00005	ABC transporter
AhaeAN59_RS04795	PF00528	Binding-protein-dependent transport system inner membrane component
AhaeAN59_RS04800	PF02668	Taurine catabolism dioxygenase TauD, TfdA family
AhaeAN59_RS04805	PF12625	Arabinose-binding domain of AraC transcription regulator, N-term
AhaeAN59_RS04805	PF12833	Helix-turn-helix domain
AhaeAN59_RS04810	PF17048	Neutral/alkaline non-lysosomal ceramidase, C-terminal
AhaeAN59_RS04810	PF04734	Neutral/alkaline non-lysosomal ceramidase, N-terminal
AhaeAN59_RS04815	PF01565	FAD binding domain 
AhaeAN59_RS04815	PF04030	D-arabinono-1,4-lactone oxidase 
AhaeAN59_RS04825	PF00582	Universal stress protein family
AhaeAN59_RS04840	PF01327	Polypeptide deformylase
AhaeAN59_RS04845	PF13737	Transposase DDE domain
AhaeAN59_RS04855	PF02310	B12 binding domain
AhaeAN59_RS04855	PF02574	Homocysteine S-methyltransferase
AhaeAN59_RS04855	PF00809	Pterin binding enzyme
AhaeAN59_RS04855	PF02965	Vitamin B12 dependent methionine synthase, activation domain
AhaeAN59_RS04855	PF02607	B12 binding domain
AhaeAN59_RS04865	PF01384	Phosphate transporter family
AhaeAN59_RS04875	PF18073	Rubredoxin metal binding domain
AhaeAN59_RS04880	PF01235	Sodium:alanine symporter family
AhaeAN59_RS04890	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
AhaeAN59_RS04890	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
AhaeAN59_RS04895	PF01678	Diaminopimelate epimerase
AhaeAN59_RS04900	PF00561	alpha/beta hydrolase fold
AhaeAN59_RS04905	PF01810	LysE type translocator
AhaeAN59_RS04910	PF02899	Phage integrase, N-terminal SAM-like domain
AhaeAN59_RS04910	PF00589	Phage integrase family
AhaeAN59_RS04915	PF01012	Electron transfer flavoprotein domain
AhaeAN59_RS04920	PF00766	Electron transfer flavoprotein FAD-binding domain
AhaeAN59_RS04920	PF01012	Electron transfer flavoprotein domain
AhaeAN59_RS04930	PF03989	DNA gyrase C-terminal domain, beta-propeller
AhaeAN59_RS04930	PF00521	DNA gyrase/topoisomerase IV, subunit A
AhaeAN59_RS04945	PF13533	Biotin-lipoyl like
AhaeAN59_RS04955	PF00266	Aminotransferase class-V
AhaeAN59_RS04965	PF02639	Uncharacterized BCR, YaiI/YqxD family COG1671
AhaeAN59_RS04980	PF02687	FtsX-like permease family
AhaeAN59_RS04980	PF12704	MacB-like periplasmic core domain
AhaeAN59_RS04985	PF00005	ABC transporter
AhaeAN59_RS04990	PF03772	Competence protein
AhaeAN59_RS04990	PF13567	Domain of unknown function (DUF4131)
AhaeAN59_RS04990	PF00753	Metallo-beta-lactamase superfamily
AhaeAN59_RS05000	PF06965	Na+/H+ antiporter 1
AhaeAN59_RS05000	PF01343	Peptidase family S49
AhaeAN59_RS05010	PF00551	Formyl transferase
AhaeAN59_RS05015	PF02769	AIR synthase related protein, C-terminal domain
AhaeAN59_RS05015	PF00586	AIR synthase related protein, N-terminal domain
AhaeAN59_RS05020	PF01594	AI-2E family transporter
AhaeAN59_RS05025	PF11638	DnaA N-terminal domain
AhaeAN59_RS05025	PF08299	Bacterial dnaA protein helix-turn-helix
AhaeAN59_RS05025	PF00308	Bacterial dnaA  protein
AhaeAN59_RS05055	PF08032	RNA 2'-O ribose methyltransferase substrate binding
AhaeAN59_RS05055	PF00588	SpoU rRNA Methylase family
AhaeAN59_RS05060	PF00316	Fructose-1-6-bisphosphatase, N-terminal domain
AhaeAN59_RS05070	PF00691	OmpA family
AhaeAN59_RS05075	PF04052	TolB amino-terminal domain
AhaeAN59_RS05075	PF07676	WD40-like Beta Propeller Repeat
AhaeAN59_RS05085	PF02472	Biopolymer transport protein ExbD/TolR
AhaeAN59_RS05090	PF01618	MotA/TolQ/ExbB proton channel family
AhaeAN59_RS05095	PF03061	Thioesterase superfamily
AhaeAN59_RS05105	PF05496	Holliday junction DNA helicase RuvB P-loop domain
AhaeAN59_RS05105	PF05491	RuvB C-terminal winged helix domain
AhaeAN59_RS05105	PF17864	RuvB AAA lid domain
AhaeAN59_RS05110	PF01330	RuvA N terminal domain
AhaeAN59_RS05110	PF07499	RuvA, C-terminal domain
AhaeAN59_RS05115	PF01966	HD domain
AhaeAN59_RS05125	PF18076	Formylglycinamide ribonucleotide amidotransferase N-terminal
AhaeAN59_RS05125	PF18072	Formylglycinamide ribonucleotide amidotransferase linker domain
AhaeAN59_RS05125	PF02769	AIR synthase related protein, C-terminal domain
AhaeAN59_RS05145	PF01784	NIF3 (NGG1p interacting factor 3)
AhaeAN59_RS05150	PF00881	Nitroreductase family
AhaeAN59_RS05155	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AhaeAN59_RS05155	PF02378	Phosphotransferase system, EIIC 
AhaeAN59_RS05160	PF00294	pfkB family carbohydrate kinase
AhaeAN59_RS05165	PF00381	PTS HPr component phosphorylation site
AhaeAN59_RS05165	PF00391	PEP-utilising enzyme, mobile domain
AhaeAN59_RS05165	PF05524	PEP-utilising enzyme, N-terminal
AhaeAN59_RS05165	PF02896	PEP-utilising enzyme, TIM barrel domain
AhaeAN59_RS05165	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AhaeAN59_RS05170	PF00378	Enoyl-CoA hydratase/isomerase
AhaeAN59_RS05175	PF01467	Cytidylyltransferase-like
AhaeAN59_RS05175	PF00293	NUDIX domain
AhaeAN59_RS05180	PF03466	LysR substrate binding domain
AhaeAN59_RS05180	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_RS05185	PF01361	Tautomerase enzyme
AhaeAN59_RS05205	PF00578	AhpC/TSA family
AhaeAN59_RS05220	PF06508	Queuosine biosynthesis protein QueC
AhaeAN59_RS05225	PF04055	Radical SAM superfamily
AhaeAN59_RS05230	PF14602	Hexapeptide repeat of succinyl-transferase
AhaeAN59_RS05230	PF14805	Tetrahydrodipicolinate N-succinyltransferase N-terminal
AhaeAN59_RS05230	PF00132	Bacterial transferase hexapeptide (six repeats)
AhaeAN59_RS05240	PF03466	LysR substrate binding domain
AhaeAN59_RS05240	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_RS05245	PF12857	TOBE-like domain
AhaeAN59_RS05245	PF00005	ABC transporter
AhaeAN59_RS05250	PF00528	Binding-protein-dependent transport system inner membrane component
AhaeAN59_RS05255	PF00528	Binding-protein-dependent transport system inner membrane component
AhaeAN59_RS05270	PF01063	Amino-transferase class IV
AhaeAN59_RS05275	PF02618	YceG-like family
AhaeAN59_RS05280	PF02223	Thymidylate kinase
AhaeAN59_RS05285	PF02910	Fumarate reductase flavoprotein C-term
AhaeAN59_RS05285	PF00890	FAD binding domain
AhaeAN59_RS05290	PF13180	PDZ domain
AhaeAN59_RS05300	PF00679	Elongation factor G C-terminus
AhaeAN59_RS05300	PF00009	Elongation factor Tu GTP binding domain
AhaeAN59_RS05300	PF06421	GTP-binding protein LepA C-terminus
AhaeAN59_RS05300	PF03144	Elongation factor Tu domain 2
AhaeAN59_RS05305	PF10502	Signal peptidase, peptidase S26 
AhaeAN59_RS05315	PF14622	Ribonuclease-III-like
AhaeAN59_RS05315	PF00035	Double-stranded RNA binding motif
AhaeAN59_RS05320	PF07650	KH domain
AhaeAN59_RS05320	PF01926	50S ribosome-binding GTPase
AhaeAN59_RS05330	PF02565	Recombination protein O C terminal
AhaeAN59_RS05330	PF11967	Recombination protein O N terminal
AhaeAN59_RS05335	PF03740	Pyridoxal phosphate biosynthesis protein PdxJ
AhaeAN59_RS05340	PF06175	tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE)
AhaeAN59_RS05370	PF00082	Subtilase family
AhaeAN59_RS05370	PF05922	Peptidase inhibitor I9
AhaeAN59_RS05380	PF05922	Peptidase inhibitor I9
AhaeAN59_RS05380	PF00082	Subtilase family
AhaeAN59_RS05385	PF04851	Type III restriction enzyme, res subunit
AhaeAN59_RS05385	PF17757	UvrB interaction domain
AhaeAN59_RS05385	PF00271	Helicase conserved C-terminal domain
AhaeAN59_RS05385	PF12344	Ultra-violet resistance protein B
AhaeAN59_RS05385	PF02151	UvrB/uvrC motif
AhaeAN59_RS05400	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AhaeAN59_RS05400	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
AhaeAN59_RS05420	PF01926	50S ribosome-binding GTPase
AhaeAN59_RS05420	PF01018	GTP1/OBG
AhaeAN59_RS05425	PF01472	PUA domain
AhaeAN59_RS05425	PF00696	Amino acid kinase family
AhaeAN59_RS05440	PF00005	ABC transporter
AhaeAN59_RS05440	PF08402	TOBE domain
AhaeAN59_RS05450	PF07759	Protein of unknown function (DUF1615)
AhaeAN59_RS05455	PF01207	Dihydrouridine synthase (Dus)
AhaeAN59_RS05460	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_RS05460	PF03466	LysR substrate binding domain
AhaeAN59_RS05465	PF12697	Alpha/beta hydrolase family
AhaeAN59_RS05470	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AhaeAN59_RS05470	PF18113	Rubredoxin binding C-terminal domain
AhaeAN59_RS05480	PF00301	Rubredoxin
AhaeAN59_RS05490	PF00152	tRNA synthetases class II (D, K and N) 
AhaeAN59_RS05490	PF01336	OB-fold nucleic acid binding domain
AhaeAN59_RS05495	PF13737	Transposase DDE domain
AhaeAN59_RS05500	PF14052	Capsule assembly protein Wzi
AhaeAN59_RS05505	PF01507	Phosphoadenosine phosphosulfate reductase family
AhaeAN59_RS05510	PF00009	Elongation factor Tu GTP binding domain
AhaeAN59_RS05525	PF00542	Ribosomal protein L7/L12 C-terminal domain
AhaeAN59_RS05525	PF16320	Ribosomal protein L7/L12 dimerisation domain
AhaeAN59_RS05530	PF01595	Cyclin M transmembrane N-terminal domain
AhaeAN59_RS05530	PF03471	Transporter associated domain
AhaeAN59_RS05530	PF00571	CBS domain
AhaeAN59_RS05535	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_RS05535	PF03466	LysR substrate binding domain
AhaeAN59_RS05540	PF00463	Isocitrate lyase family
AhaeAN59_RS05545	PF17185	NlpE C-terminal OB domain
AhaeAN59_RS05545	PF04170	NlpE N-terminal domain
AhaeAN59_RS05555	PF01406	tRNA synthetases class I (C) catalytic domain
AhaeAN59_RS05555	PF09190	DALR domain
AhaeAN59_RS05560	PF01380	SIS domain
AhaeAN59_RS05560	PF00571	CBS domain
AhaeAN59_RS05575	PF03968	OstA-like protein
AhaeAN59_RS05580	PF00005	ABC transporter
AhaeAN59_RS05580	PF12399	Branched-chain amino acid ATP-binding cassette transporter
AhaeAN59_RS05585	PF02321	Outer membrane efflux protein
AhaeAN59_RS05590	PF00005	ABC transporter
AhaeAN59_RS05590	PF00664	ABC transporter transmembrane region
AhaeAN59_RS05590	PF03412	Peptidase C39 family
AhaeAN59_RS05600	PF01205	Uncharacterized protein family UPF0029
AhaeAN59_RS05605	PF00132	Bacterial transferase hexapeptide (six repeats)
AhaeAN59_RS05615	PF01596	O-methyltransferase
AhaeAN59_RS05625	PF11953	Domain of unknown function (DUF3470)
AhaeAN59_RS05625	PF00037	4Fe-4S binding domain
AhaeAN59_RS05635	PF05188	MutS domain II
AhaeAN59_RS05635	PF00488	MutS domain V
AhaeAN59_RS05635	PF01624	MutS domain I
AhaeAN59_RS05635	PF05190	MutS family domain IV
AhaeAN59_RS05635	PF05192	MutS domain III
AhaeAN59_RS05650	PF03466	LysR substrate binding domain
AhaeAN59_RS05650	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_RS05675	PF01970	Tripartite tricarboxylate transporter TctA family
AhaeAN59_RS05680	PF13737	Transposase DDE domain
AhaeAN59_RS05685	PF01970	Tripartite tricarboxylate transporter TctA family
AhaeAN59_RS05700	PF00717	Peptidase S24-like
AhaeAN59_RS05705	PF13438	Domain of unknown function (DUF4113)
AhaeAN59_RS05705	PF00817	impB/mucB/samB family
AhaeAN59_RS05705	PF11799	impB/mucB/samB family C-terminal domain
AhaeAN59_RS05715	PF01925	Sulfite exporter TauE/SafE
AhaeAN59_RS05720	PF03466	LysR substrate binding domain
AhaeAN59_RS05720	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_RS05750	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AhaeAN59_RS05750	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
AhaeAN59_RS05755	PF01553	Acyltransferase
AhaeAN59_RS05760	PF01435	Peptidase family M48
AhaeAN59_RS05775	PF09424	Yqey-like protein
AhaeAN59_RS05780	PF01165	Ribosomal protein S21
AhaeAN59_RS05785	PF00814	Glycoprotease family
AhaeAN59_RS05795	PF00892	EamA-like transporter family
AhaeAN59_RS05830	PF03793	PASTA domain
AhaeAN59_RS05830	PF00069	Protein kinase domain
AhaeAN59_RS05860	PF00550	Phosphopantetheine attachment site
AhaeAN59_RS05860	PF13193	AMP-binding enzyme C-terminal domain
AhaeAN59_RS05860	PF00668	Condensation domain
AhaeAN59_RS05860	PF00501	AMP-binding enzyme
AhaeAN59_RS05860	PF00975	Thioesterase domain
AhaeAN59_RS05865	PF00668	Condensation domain
AhaeAN59_RS05865	PF00975	Thioesterase domain
AhaeAN59_RS05865	PF00501	AMP-binding enzyme
AhaeAN59_RS05865	PF13193	AMP-binding enzyme C-terminal domain
AhaeAN59_RS05865	PF00550	Phosphopantetheine attachment site
AhaeAN59_RS05870	PF01032	FecCD transport family
AhaeAN59_RS05875	PF01032	FecCD transport family
AhaeAN59_RS05880	PF00005	ABC transporter
AhaeAN59_RS05895	PF13005	zinc-finger binding domain of transposase IS66 
AhaeAN59_RS05895	PF13007	Transposase C of IS166 homeodomain
AhaeAN59_RS05895	PF13817	IS66 C-terminal element
AhaeAN59_RS05895	PF03050	Transposase IS66 family 
AhaeAN59_RS05915	PF13434	L-lysine 6-monooxygenase (NADPH-requiring)
AhaeAN59_RS05920	PF00975	Thioesterase domain
AhaeAN59_RS05920	PF00550	Phosphopantetheine attachment site
AhaeAN59_RS05920	PF00668	Condensation domain
AhaeAN59_RS05920	PF00501	AMP-binding enzyme
AhaeAN59_RS05920	PF13193	AMP-binding enzyme C-terminal domain
AhaeAN59_RS05925	PF00501	AMP-binding enzyme
AhaeAN59_RS05925	PF13193	AMP-binding enzyme C-terminal domain
AhaeAN59_RS05930	PF00550	Phosphopantetheine attachment site
AhaeAN59_RS05930	PF00857	Isochorismatase family
AhaeAN59_RS05935	PF00282	Pyridoxal-dependent decarboxylase conserved domain
AhaeAN59_RS05940	PF00664	ABC transporter transmembrane region
AhaeAN59_RS05940	PF00005	ABC transporter
AhaeAN59_RS05945	PF00664	ABC transporter transmembrane region
AhaeAN59_RS05945	PF00005	ABC transporter
AhaeAN59_RS05950	PF00975	Thioesterase domain
AhaeAN59_RS05955	PF17837	4'-phosphopantetheinyl transferase N-terminal domain
AhaeAN59_RS05955	PF01648	4'-phosphopantetheinyl transferase superfamily
AhaeAN59_RS05960	PF00425	chorismate binding enzyme
AhaeAN59_RS05965	PF00106	short chain dehydrogenase
AhaeAN59_RS05970	PF09339	IclR helix-turn-helix domain
AhaeAN59_RS05970	PF01614	Bacterial transcriptional regulator
AhaeAN59_RS05975	PF00355	Rieske [2Fe-2S] domain
AhaeAN59_RS05985	PF00355	Rieske [2Fe-2S] domain
AhaeAN59_RS05995	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AhaeAN59_RS06010	PF08328	Adenylosuccinate lyase C-terminal
AhaeAN59_RS06010	PF00206	Lyase
AhaeAN59_RS06015	PF04356	Protein of unknown function (DUF489)
AhaeAN59_RS06025	PF00293	NUDIX domain
AhaeAN59_RS06035	PF00132	Bacterial transferase hexapeptide (six repeats)
AhaeAN59_RS06040	PF00768	D-alanyl-D-alanine carboxypeptidase
AhaeAN59_RS06040	PF07943	Penicillin-binding protein 5, C-terminal domain
AhaeAN59_RS06060	PF01975	Survival protein SurE
AhaeAN59_RS06065	PF01476	LysM domain
AhaeAN59_RS06065	PF01551	Peptidase family M23
AhaeAN59_RS06070	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_RS06070	PF03466	LysR substrate binding domain
AhaeAN59_RS06075	PF05362	Lon protease (S16) C-terminal proteolytic domain
AhaeAN59_RS06075	PF13654	AAA domain
AhaeAN59_RS06080	PF07690	Major Facilitator Superfamily
AhaeAN59_RS06085	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AhaeAN59_RS06090	PF13593	SBF-like CPA transporter family (DUF4137)
AhaeAN59_RS06095	PF01197	Ribosomal protein L31
AhaeAN59_RS06110	PF04055	Radical SAM superfamily
AhaeAN59_RS06115	PF08207	Elongation factor P (EF-P) KOW-like domain
AhaeAN59_RS06115	PF01132	Elongation factor P (EF-P) OB domain
AhaeAN59_RS06115	PF09285	Elongation factor P, C-terminal
AhaeAN59_RS06135	PF04328	Selenoprotein, putative 
AhaeAN59_RS06140	PF07726	ATPase family associated with various cellular activities (AAA)
AhaeAN59_RS06140	PF17863	AAA lid domain
AhaeAN59_RS06150	PF01841	Transglutaminase-like superfamily
AhaeAN59_RS06150	PF13559	Domain of unknown function (DUF4129)
AhaeAN59_RS06150	PF11992	Domain of unknown function (DUF3488)
AhaeAN59_RS06170	PF17954	Quercetinase C-terminal cupin domain
AhaeAN59_RS06170	PF02678	Pirin
AhaeAN59_RS06175	PF00764	Arginosuccinate synthase
AhaeAN59_RS06185	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AhaeAN59_RS06185	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
AhaeAN59_RS06195	PF03466	LysR substrate binding domain
AhaeAN59_RS06195	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_RS06200	PF07883	Cupin domain
AhaeAN59_RS06205	PF13417	Glutathione S-transferase, N-terminal domain
AhaeAN59_RS06210	PF01557	Fumarylacetoacetate (FAA) hydrolase family
AhaeAN59_RS06215	PF07690	Major Facilitator Superfamily
AhaeAN59_RS06255	PF00486	Transcriptional regulatory protein, C terminal
AhaeAN59_RS06255	PF00072	Response regulator receiver domain
AhaeAN59_RS06260	PF11412	Disulphide bond corrector protein DsbC
AhaeAN59_RS06260	PF02683	Cytochrome C biogenesis protein transmembrane region
AhaeAN59_RS06265	PF08534	Redoxin
AhaeAN59_RS06280	PF00753	Metallo-beta-lactamase superfamily
AhaeAN59_RS06290	PF01925	Sulfite exporter TauE/SafE
AhaeAN59_RS06300	PF07715	TonB-dependent Receptor Plug Domain
AhaeAN59_RS06300	PF00593	TonB dependent receptor
AhaeAN59_RS06305	PF04717	Type VI secretion system, phage-baseplate injector
AhaeAN59_RS06360	PF01979	Amidohydrolase family
AhaeAN59_RS06370	PF01502	Phosphoribosyl-AMP cyclohydrolase
AhaeAN59_RS06375	PF02649	Type I GTP cyclohydrolase folE2
AhaeAN59_RS06390	PF02492	CobW/HypB/UreG, nucleotide-binding domain
AhaeAN59_RS06390	PF07683	Cobalamin synthesis protein cobW C-terminal domain
AhaeAN59_RS06395	PF09339	IclR helix-turn-helix domain
AhaeAN59_RS06395	PF01614	Bacterial transcriptional regulator
AhaeAN59_RS06400	PF01144	Coenzyme A transferase
AhaeAN59_RS06405	PF01144	Coenzyme A transferase
AhaeAN59_RS06410	PF00108	Thiolase, N-terminal domain
AhaeAN59_RS06410	PF02803	Thiolase, C-terminal domain
AhaeAN59_RS06415	PF00206	Lyase
AhaeAN59_RS06415	PF10397	Adenylosuccinate lyase C-terminus
AhaeAN59_RS06420	PF00561	alpha/beta hydrolase fold
AhaeAN59_RS06425	PF07690	Major Facilitator Superfamily
AhaeAN59_RS06430	PF02627	Carboxymuconolactone decarboxylase family
AhaeAN59_RS06435	PF00775	Dioxygenase
AhaeAN59_RS06435	PF12391	Protocatechuate 3,4-dioxygenase beta subunit N terminal
AhaeAN59_RS06440	PF00775	Dioxygenase
AhaeAN59_RS06445	PF01487	Type I 3-dehydroquinase
AhaeAN59_RS06450	PF05048	Periplasmic copper-binding protein (NosD)
AhaeAN59_RS06455	PF04966	Carbohydrate-selective porin, OprB family
AhaeAN59_RS06460	PF13360	PQQ-like domain
AhaeAN59_RS06460	PF01011	PQQ enzyme repeat
AhaeAN59_RS06470	PF00576	HIUase/Transthyretin family
AhaeAN59_RS06475	PF00860	Permease family
AhaeAN59_RS06495	PF01494	FAD binding domain
AhaeAN59_RS06500	PF00392	Bacterial regulatory proteins, gntR family
AhaeAN59_RS06500	PF07729	FCD domain
AhaeAN59_RS06505	PF03561	Allantoicase repeat
AhaeAN59_RS06510	PF04115	Ureidoglycolate lyase
AhaeAN59_RS06515	PF03171	2OG-Fe(II) oxygenase superfamily
AhaeAN59_RS06515	PF14226	non-haem dioxygenase in morphine synthesis N-terminal
AhaeAN59_RS06525	PF13737	Transposase DDE domain
AhaeAN59_RS06530	PF09084	NMT1/THI5 like
AhaeAN59_RS06535	PF00005	ABC transporter
AhaeAN59_RS06540	PF00528	Binding-protein-dependent transport system inner membrane component
AhaeAN59_RS06545	PF01979	Amidohydrolase family
AhaeAN59_RS06555	PF03466	LysR substrate binding domain
AhaeAN59_RS06555	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_RS06560	PF00355	Rieske [2Fe-2S] domain
AhaeAN59_RS06565	PF00392	Bacterial regulatory proteins, gntR family
AhaeAN59_RS06565	PF07702	UTRA domain
AhaeAN59_RS06570	PF05962	HutD
AhaeAN59_RS06575	PF01175	Urocanase Rossmann-like domain
AhaeAN59_RS06575	PF17392	Urocanase C-terminal domain
AhaeAN59_RS06575	PF17391	Urocanase N-terminal domain
AhaeAN59_RS06580	PF00221	Aromatic amino acid lyase
AhaeAN59_RS06585	PF01979	Amidohydrolase family
AhaeAN59_RS06590	PF00491	Arginase family
AhaeAN59_RS06595	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AhaeAN59_RS06595	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
AhaeAN59_RS06600	PF00392	Bacterial regulatory proteins, gntR family
AhaeAN59_RS06600	PF00155	Aminotransferase class I and II
AhaeAN59_RS06625	PF12833	Helix-turn-helix domain
AhaeAN59_RS06625	PF12625	Arabinose-binding domain of AraC transcription regulator, N-term
AhaeAN59_RS06645	PF00384	Molybdopterin oxidoreductase
AhaeAN59_RS06650	PF02634	FdhD/NarQ family
AhaeAN59_RS06655	PF04261	Dyp-type peroxidase family 
AhaeAN59_RS06665	PF02321	Outer membrane efflux protein
AhaeAN59_RS06670	PF00873	AcrB/AcrD/AcrF family
AhaeAN59_RS06675	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
AhaeAN59_RS06675	PF00529	HlyD membrane-fusion protein of T1SS
AhaeAN59_RS06680	PF00486	Transcriptional regulatory protein, C terminal
AhaeAN59_RS06680	PF00072	Response regulator receiver domain
AhaeAN59_RS06685	PF00672	HAMP domain
AhaeAN59_RS06685	PF00512	His Kinase A (phospho-acceptor) domain
AhaeAN59_RS06685	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AhaeAN59_RS06690	PF08212	Lipocalin-like domain
AhaeAN59_RS06725	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AhaeAN59_RS06725	PF08521	Two-component sensor kinase N-terminal
AhaeAN59_RS06725	PF00512	His Kinase A (phospho-acceptor) domain
AhaeAN59_RS06730	PF00486	Transcriptional regulatory protein, C terminal
AhaeAN59_RS06730	PF00072	Response regulator receiver domain
AhaeAN59_RS06745	PF00440	Bacterial regulatory proteins, tetR family
AhaeAN59_RS06745	PF17932	Tetracyclin repressor-like, C-terminal domain
AhaeAN59_RS06760	PF00106	short chain dehydrogenase
AhaeAN59_RS06765	PF00743	Flavin-binding monooxygenase-like
AhaeAN59_RS06770	PF04072	Leucine carboxyl methyltransferase
AhaeAN59_RS06775	PF03279	Bacterial lipid A biosynthesis acyltransferase
AhaeAN59_RS06780	PF03746	LamB/YcsF family
AhaeAN59_RS06785	PF02682	Carboxyltransferase domain, subdomain C and D
AhaeAN59_RS06790	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
AhaeAN59_RS06790	PF02785	Biotin carboxylase C-terminal domain
AhaeAN59_RS06790	PF00289	Biotin carboxylase, N-terminal domain
AhaeAN59_RS06790	PF00364	Biotin-requiring enzyme
AhaeAN59_RS06795	PF01435	Peptidase family M48
AhaeAN59_RS06800	PF13545	Crp-like helix-turn-helix domain
AhaeAN59_RS06800	PF00027	Cyclic nucleotide-binding domain
AhaeAN59_RS06805	PF02566	OsmC-like protein
AhaeAN59_RS06815	PF00004	ATPase family associated with various cellular activities (AAA)
AhaeAN59_RS06815	PF07724	AAA domain (Cdc48 subfamily)
AhaeAN59_RS06815	PF02861	Clp amino terminal domain, pathogenicity island component
AhaeAN59_RS06815	PF17871	AAA lid domain
AhaeAN59_RS06815	PF10431	C-terminal, D2-small domain, of ClpB protein 
AhaeAN59_RS06825	PF02926	THUMP domain
AhaeAN59_RS06825	PF10672	S-adenosylmethionine-dependent methyltransferase
AhaeAN59_RS06825	PF01170	Putative RNA methylase family UPF0020
AhaeAN59_RS06835	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
AhaeAN59_RS06835	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
AhaeAN59_RS06840	PF01979	Amidohydrolase family
AhaeAN59_RS06855	PF04717	Type VI secretion system, phage-baseplate injector
AhaeAN59_RS06900	PF00005	ABC transporter
AhaeAN59_RS06905	PF02110	Hydroxyethylthiazole kinase family
AhaeAN59_RS06935	PF01433	Peptidase family M1 domain
AhaeAN59_RS06935	PF17432	Domain of unknown function (DUF3458_C) ARM repeats
AhaeAN59_RS06935	PF11940	Domain of unknown function (DUF3458) Ig-like fold
AhaeAN59_RS06940	PF03313	Serine dehydratase alpha chain
AhaeAN59_RS06940	PF03315	Serine dehydratase beta chain
AhaeAN59_RS06960	PF06271	RDD family
AhaeAN59_RS06965	PF02308	MgtC family
AhaeAN59_RS06975	PF02254	TrkA-N domain
AhaeAN59_RS06975	PF00999	Sodium/hydrogen exchanger family
AhaeAN59_RS06980	PF03594	Benzoate membrane transport protein
AhaeAN59_RS06985	PF01810	LysE type translocator
AhaeAN59_RS06995	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_RS06995	PF03466	LysR substrate binding domain
AhaeAN59_RS07015	PF17757	UvrB interaction domain
AhaeAN59_RS07015	PF02559	CarD-like/TRCF domain
AhaeAN59_RS07015	PF00270	DEAD/DEAH box helicase
AhaeAN59_RS07015	PF03461	TRCF domain
AhaeAN59_RS07015	PF00271	Helicase conserved C-terminal domain
AhaeAN59_RS07025	PF00211	Adenylate and Guanylate cyclase catalytic domain
AhaeAN59_RS07030	PF00111	2Fe-2S iron-sulfur cluster binding domain
AhaeAN59_RS07035	PF00012	Hsp70 protein
AhaeAN59_RS07040	PF07743	HSCB C-terminal oligomerisation domain
AhaeAN59_RS07040	PF00226	DnaJ domain
AhaeAN59_RS07045	PF01521	Iron-sulphur cluster biosynthesis
AhaeAN59_RS07050	PF01592	NifU-like N terminal domain
AhaeAN59_RS07055	PF00266	Aminotransferase class-V
AhaeAN59_RS07060	PF02082	Transcriptional regulator
AhaeAN59_RS07075	PF00216	Bacterial DNA-binding protein
AhaeAN59_RS07095	PF02631	RecX family
AhaeAN59_RS07100	PF00154	recA bacterial DNA recombination protein
AhaeAN59_RS07105	PF01479	S4 domain
AhaeAN59_RS07110	PF13419	Haloacid dehalogenase-like hydrolase
AhaeAN59_RS07115	PF00459	Inositol monophosphatase family
AhaeAN59_RS07125	PF00041	Fibronectin type III domain
AhaeAN59_RS07125	PF12561	ToxR activated gene A lipoprotein domain
AhaeAN59_RS07135	PF01649	Ribosomal protein S20
AhaeAN59_RS07140	PF13460	NAD(P)H-binding 
AhaeAN59_RS07145	PF03737	Aldolase/RraA
AhaeAN59_RS07185	PF00108	Thiolase, N-terminal domain
AhaeAN59_RS07185	PF02803	Thiolase, C-terminal domain
AhaeAN59_RS07225	PF07690	Major Facilitator Superfamily
AhaeAN59_RS07230	PF02525	Flavodoxin-like fold
AhaeAN59_RS07235	PF03466	LysR substrate binding domain
AhaeAN59_RS07235	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_RS07240	PF02545	Maf-like protein
AhaeAN59_RS07250	PF00162	Phosphoglycerate kinase
AhaeAN59_RS07265	PF13737	Transposase DDE domain
AhaeAN59_RS07285	PF07479	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
AhaeAN59_RS07285	PF01210	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
AhaeAN59_RS07305	PF01180	Dihydroorotate dehydrogenase
AhaeAN59_RS07310	PF02674	Colicin V production protein
AhaeAN59_RS07315	PF00156	Phosphoribosyl transferase domain
AhaeAN59_RS07355	PF05816	Toxic anion resistance protein (TelA)
AhaeAN59_RS07365	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AhaeAN59_RS07365	PF13192	Thioredoxin domain
AhaeAN59_RS07380	PF00132	Bacterial transferase hexapeptide (six repeats)
AhaeAN59_RS07385	PF00588	SpoU rRNA Methylase family
AhaeAN59_RS07390	PF14579	Helix-hairpin-helix motif
AhaeAN59_RS07390	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
AhaeAN59_RS07390	PF02811	PHP domain
AhaeAN59_RS07390	PF01336	OB-fold nucleic acid binding domain
AhaeAN59_RS07390	PF07733	Bacterial DNA polymerase III alpha NTPase domain
AhaeAN59_RS07395	PF17763	Glutaminase/Asparaginase C-terminal domain
AhaeAN59_RS07395	PF00710	Asparaginase, N-terminal
AhaeAN59_RS07405	PF00155	Aminotransferase class I and II
AhaeAN59_RS07410	PF01641	SelR domain
AhaeAN59_RS07415	PF00255	Glutathione peroxidase
AhaeAN59_RS07420	PF00873	AcrB/AcrD/AcrF family
AhaeAN59_RS07425	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
AhaeAN59_RS07430	PF01037	Lrp/AsnC ligand binding domain
AhaeAN59_RS07440	PF00155	Aminotransferase class I and II
AhaeAN59_RS07445	PF01966	HD domain
AhaeAN59_RS07445	PF01909	Nucleotidyltransferase domain
AhaeAN59_RS07445	PF08335	GlnD PII-uridylyltransferase
AhaeAN59_RS07450	PF02222	ATP-grasp domain
AhaeAN59_RS07465	PF01595	Cyclin M transmembrane N-terminal domain
AhaeAN59_RS07465	PF00571	CBS domain
AhaeAN59_RS07470	PF00027	Cyclic nucleotide-binding domain
AhaeAN59_RS07470	PF13545	Crp-like helix-turn-helix domain
AhaeAN59_RS07480	PF06071	Protein of unknown function (DUF933)
AhaeAN59_RS07480	PF01926	50S ribosome-binding GTPase
AhaeAN59_RS07485	PF00528	Binding-protein-dependent transport system inner membrane component
AhaeAN59_RS07490	PF00005	ABC transporter
AhaeAN59_RS07490	PF09383	NIL domain
AhaeAN59_RS07495	PF03180	NLPA lipoprotein
AhaeAN59_RS07500	PF00296	Luciferase-like monooxygenase
AhaeAN59_RS07510	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AhaeAN59_RS07510	PF08028	Acyl-CoA dehydrogenase, C-terminal domain
AhaeAN59_RS07525	PF07687	Peptidase dimerisation domain
AhaeAN59_RS07525	PF01546	Peptidase family M20/M25/M40
AhaeAN59_RS07535	PF07804	HipA-like C-terminal domain
AhaeAN59_RS07550	PF03883	Peroxide stress protein YaaA
AhaeAN59_RS07570	PF05690	Thiazole biosynthesis protein ThiG
AhaeAN59_RS07580	PF04241	Protein of unknown function (DUF423)
AhaeAN59_RS07585	PF00140	Sigma-70 factor, region 1.2
AhaeAN59_RS07585	PF04542	Sigma-70 region 2 
AhaeAN59_RS07585	PF04545	Sigma-70, region 4
AhaeAN59_RS07595	PF00313	'Cold-shock' DNA-binding domain
AhaeAN59_RS07600	PF00270	DEAD/DEAH box helicase
AhaeAN59_RS07600	PF00271	Helicase conserved C-terminal domain
AhaeAN59_RS07605	PF01116	Fructose-bisphosphate aldolase class-II
AhaeAN59_RS07610	PF00639	PPIC-type PPIASE domain
AhaeAN59_RS07610	PF09312	SurA N-terminal domain
AhaeAN59_RS07615	PF04453	LPS transport system D
AhaeAN59_RS07615	PF03968	OstA-like protein
AhaeAN59_RS07620	PF01636	Phosphotransferase enzyme family
AhaeAN59_RS07625	PF00483	Nucleotidyl transferase
AhaeAN59_RS07630	PF02527	rRNA small subunit methyltransferase G
AhaeAN59_RS07635	PF13614	AAA domain
AhaeAN59_RS07640	PF17762	HTH domain found in ParB protein
AhaeAN59_RS07640	PF02195	ParB-like nuclease domain
AhaeAN59_RS07645	PF01618	MotA/TolQ/ExbB proton channel family
AhaeAN59_RS07655	PF00664	ABC transporter transmembrane region
AhaeAN59_RS07655	PF00005	ABC transporter
AhaeAN59_RS07660	PF02606	Tetraacyldisaccharide-1-P 4'-kinase
AhaeAN59_RS07665	PF02348	Cytidylyltransferase
AhaeAN59_RS07670	PF09115	DNA polymerase III, delta subunit, C terminal
AhaeAN59_RS07685	PF01026	TatD related DNase
AhaeAN59_RS07700	PF02501	Type II secretion system (T2SS), protein I
AhaeAN59_RS07700	PF07963	Prokaryotic N-terminal methylation motif
AhaeAN59_RS07705	PF11612	Type II secretion system (T2SS), protein J
AhaeAN59_RS07705	PF07963	Prokaryotic N-terminal methylation motif
AhaeAN59_RS07710	PF03934	Type II secretion system (T2SS), protein K
AhaeAN59_RS07720	PF03167	Uracil DNA glycosylase superfamily
AhaeAN59_RS07730	PF14437	MafB19-like deaminase
AhaeAN59_RS07740	PF02224	Cytidylate kinase
AhaeAN59_RS07745	PF00575	S1 RNA binding domain
AhaeAN59_RS07750	PF00216	Bacterial DNA-binding protein
AhaeAN59_RS07760	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
AhaeAN59_RS07765	PF03956	Lysine exporter LysO
AhaeAN59_RS07790	PF03969	AFG1-like ATPase
AhaeAN59_RS07795	PF01274	Malate synthase
AhaeAN59_RS07840	PF05525	Branched-chain amino acid transport protein
AhaeAN59_RS07845	PF00557	Metallopeptidase family M24
AhaeAN59_RS07850	PF03466	LysR substrate binding domain
AhaeAN59_RS07850	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_RS07860	PF00462	Glutaredoxin
AhaeAN59_RS07865	PF00202	Aminotransferase class-III
AhaeAN59_RS07870	PF00571	CBS domain
AhaeAN59_RS07870	PF01380	SIS domain
AhaeAN59_RS07895	PF00448	SRP54-type protein, GTPase domain
AhaeAN59_RS07895	PF02881	SRP54-type protein, helical bundle domain
AhaeAN59_RS07925	PF08173	Membrane bound YbgT-like protein
AhaeAN59_RS07930	PF02322	Cytochrome bd terminal oxidase subunit II
AhaeAN59_RS07935	PF01654	Cytochrome bd terminal oxidase subunit I
AhaeAN59_RS07955	PF00294	pfkB family carbohydrate kinase
AhaeAN59_RS07970	PF08367	Peptidase M16C associated
AhaeAN59_RS07970	PF05193	Peptidase M16 inactive domain
AhaeAN59_RS07970	PF00675	Insulinase (Peptidase family M16)
AhaeAN59_RS07975	PF02253	Phospholipase A1
AhaeAN59_RS07985	PF02386	Cation transport protein
AhaeAN59_RS07990	PF02080	TrkA-C domain
AhaeAN59_RS07990	PF02254	TrkA-N domain
AhaeAN59_RS07995	PF00291	Pyridoxal-phosphate dependent enzyme
AhaeAN59_RS07995	PF00585	C-terminal regulatory domain of Threonine dehydratase
AhaeAN59_RS08000	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
AhaeAN59_RS08015	PF00245	Alkaline phosphatase
AhaeAN59_RS08025	PF01118	Semialdehyde dehydrogenase, NAD binding domain
AhaeAN59_RS08025	PF02774	Semialdehyde dehydrogenase, dimerisation domain
AhaeAN59_RS08035	PF02617	ATP-dependent Clp protease adaptor protein ClpS
AhaeAN59_RS08040	PF00004	ATPase family associated with various cellular activities (AAA)
AhaeAN59_RS08040	PF07724	AAA domain (Cdc48 subfamily)
AhaeAN59_RS08040	PF17871	AAA lid domain
AhaeAN59_RS08040	PF02861	Clp amino terminal domain, pathogenicity island component
AhaeAN59_RS08040	PF10431	C-terminal, D2-small domain, of ClpB protein 
AhaeAN59_RS08045	PF02694	Uncharacterised BCR, YnfA/UPF0060 family
AhaeAN59_RS08050	PF00793	DAHP synthetase I family
AhaeAN59_RS08055	PF12697	Alpha/beta hydrolase family
AhaeAN59_RS08065	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AhaeAN59_RS08065	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
AhaeAN59_RS08090	PF06418	CTP synthase N-terminus
AhaeAN59_RS08090	PF00117	Glutamine amidotransferase class-I
AhaeAN59_RS08095	PF00793	DAHP synthetase I family
AhaeAN59_RS08100	PF00113	Enolase, C-terminal TIM barrel domain
AhaeAN59_RS08100	PF03952	Enolase, N-terminal domain
AhaeAN59_RS08105	PF04977	Septum formation initiator
AhaeAN59_RS08110	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
AhaeAN59_RS08130	PF04143	Sulphur transport
AhaeAN59_RS08140	PF00753	Metallo-beta-lactamase superfamily
AhaeAN59_RS08160	PF13091	PLD-like domain
AhaeAN59_RS08170	PF02583	Metal-sensitive transcriptional repressor
AhaeAN59_RS08175	PF08240	Alcohol dehydrogenase GroES-like domain
AhaeAN59_RS08175	PF00107	Zinc-binding dehydrogenase
AhaeAN59_RS08180	PF01425	Amidase
AhaeAN59_RS08185	PF02785	Biotin carboxylase C-terminal domain
AhaeAN59_RS08185	PF00289	Biotin carboxylase, N-terminal domain
AhaeAN59_RS08185	PF00364	Biotin-requiring enzyme
AhaeAN59_RS08185	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
AhaeAN59_RS08190	PF07729	FCD domain
AhaeAN59_RS08190	PF00392	Bacterial regulatory proteins, gntR family
AhaeAN59_RS08205	PF13737	Transposase DDE domain
AhaeAN59_RS08215	PF08240	Alcohol dehydrogenase GroES-like domain
AhaeAN59_RS08215	PF00107	Zinc-binding dehydrogenase
AhaeAN59_RS08220	PF01965	DJ-1/PfpI family
AhaeAN59_RS08225	PF02558	Ketopantoate reductase PanE/ApbA
AhaeAN59_RS08225	PF08546	Ketopantoate reductase PanE/ApbA C terminal
AhaeAN59_RS08250	PF07690	Major Facilitator Superfamily
AhaeAN59_RS08275	PF18381	YcaO cyclodehydratase C-terminal domain
AhaeAN59_RS08275	PF02624	YcaO cyclodehydratase, ATP-ad Mg2+-binding
AhaeAN59_RS08285	PF00106	short chain dehydrogenase
AhaeAN59_RS08295	PF01037	Lrp/AsnC ligand binding domain
AhaeAN59_RS08310	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
AhaeAN59_RS08310	PF00289	Biotin carboxylase, N-terminal domain
AhaeAN59_RS08310	PF02785	Biotin carboxylase C-terminal domain
AhaeAN59_RS08315	PF08753	NikR C terminal nickel binding domain
AhaeAN59_RS08315	PF01402	Ribbon-helix-helix protein, copG family
AhaeAN59_RS08320	PF09084	NMT1/THI5 like
AhaeAN59_RS08325	PF00005	ABC transporter
AhaeAN59_RS08330	PF00528	Binding-protein-dependent transport system inner membrane component
AhaeAN59_RS08335	PF04542	Sigma-70 region 2 
AhaeAN59_RS08335	PF08281	Sigma-70, region 4
AhaeAN59_RS08365	PF01126	Heme oxygenase
AhaeAN59_RS08395	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_RS08395	PF03466	LysR substrate binding domain
AhaeAN59_RS08400	PF00682	HMGL-like
AhaeAN59_RS08405	PF00364	Biotin-requiring enzyme
AhaeAN59_RS08405	PF00289	Biotin carboxylase, N-terminal domain
AhaeAN59_RS08405	PF02785	Biotin carboxylase C-terminal domain
AhaeAN59_RS08405	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
AhaeAN59_RS08410	PF00378	Enoyl-CoA hydratase/isomerase
AhaeAN59_RS08415	PF01039	Carboxyl transferase domain
AhaeAN59_RS08420	PF02770	Acyl-CoA dehydrogenase, middle domain
AhaeAN59_RS08420	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AhaeAN59_RS08420	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AhaeAN59_RS08425	PF00440	Bacterial regulatory proteins, tetR family
AhaeAN59_RS08430	PF00501	AMP-binding enzyme
AhaeAN59_RS08430	PF13193	AMP-binding enzyme C-terminal domain
AhaeAN59_RS08445	PF07690	Major Facilitator Superfamily
AhaeAN59_RS08450	PF02803	Thiolase, C-terminal domain
AhaeAN59_RS08450	PF00108	Thiolase, N-terminal domain
AhaeAN59_RS08455	PF01144	Coenzyme A transferase
AhaeAN59_RS08460	PF01144	Coenzyme A transferase
AhaeAN59_RS08465	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_RS08465	PF03466	LysR substrate binding domain
AhaeAN59_RS08475	PF00593	TonB dependent receptor
AhaeAN59_RS08475	PF07715	TonB-dependent Receptor Plug Domain
AhaeAN59_RS08520	PF02525	Flavodoxin-like fold
AhaeAN59_RS08530	PF00990	Diguanylate cyclase, GGDEF domain
AhaeAN59_RS08535	PF01264	Chorismate synthase
AhaeAN59_RS08540	PF05175	Methyltransferase small domain
AhaeAN59_RS08550	PF01434	Peptidase family M41
AhaeAN59_RS08550	PF17862	AAA+ lid domain
AhaeAN59_RS08550	PF00004	ATPase family associated with various cellular activities (AAA)
AhaeAN59_RS08560	PF05166	YcgL domain
AhaeAN59_RS08565	PF01612	3'-5' exonuclease
AhaeAN59_RS08565	PF00570	HRDC domain
AhaeAN59_RS08570	PF13662	Toprim domain
AhaeAN59_RS08570	PF02132	RecR protein
AhaeAN59_RS08575	PF02575	YbaB/EbfC DNA-binding family
AhaeAN59_RS08580	PF01053	Cys/Met metabolism PLP-dependent enzyme
AhaeAN59_RS08590	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
AhaeAN59_RS08590	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
AhaeAN59_RS08610	PF01230	HIT domain
AhaeAN59_RS08635	PF02684	Lipid-A-disaccharide synthetase
AhaeAN59_RS08650	PF01925	Sulfite exporter TauE/SafE
AhaeAN59_RS08655	PF00793	DAHP synthetase I family
AhaeAN59_RS08665	PF07715	TonB-dependent Receptor Plug Domain
AhaeAN59_RS08665	PF00593	TonB dependent receptor
AhaeAN59_RS08675	PF02654	Cobalamin-5-phosphate synthase
AhaeAN59_RS08685	PF00300	Histidine phosphatase superfamily (branch 1)
AhaeAN59_RS08690	PF02277	Phosphoribosyltransferase
AhaeAN59_RS08695	PF02283	Cobinamide kinase / cobinamide phosphate guanyltransferase
AhaeAN59_RS08705	PF13419	Haloacid dehalogenase-like hydrolase
AhaeAN59_RS08715	PF00593	TonB dependent receptor
AhaeAN59_RS08715	PF07715	TonB-dependent Receptor Plug Domain
AhaeAN59_RS08720	PF07690	Major Facilitator Superfamily
AhaeAN59_RS08735	PF04183	IucA / IucC family
AhaeAN59_RS08735	PF06276	Ferric iron reductase FhuF-like transporter
AhaeAN59_RS08740	PF13434	L-lysine 6-monooxygenase (NADPH-requiring)
AhaeAN59_RS08745	PF04183	IucA / IucC family
AhaeAN59_RS08745	PF06276	Ferric iron reductase FhuF-like transporter
AhaeAN59_RS08750	PF04073	Aminoacyl-tRNA editing domain
AhaeAN59_RS08760	PF03109	ABC1 family
AhaeAN59_RS08765	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AhaeAN59_RS08765	PF02770	Acyl-CoA dehydrogenase, middle domain
AhaeAN59_RS08765	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AhaeAN59_RS08770	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AhaeAN59_RS08770	PF02770	Acyl-CoA dehydrogenase, middle domain
AhaeAN59_RS08770	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AhaeAN59_RS08775	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AhaeAN59_RS08775	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AhaeAN59_RS08780	PF00487	Fatty acid desaturase
AhaeAN59_RS08800	PF13720	Udp N-acetylglucosamine O-acyltransferase; Domain 2
AhaeAN59_RS08800	PF00132	Bacterial transferase hexapeptide (six repeats)
AhaeAN59_RS08805	PF07977	FabA-like domain
AhaeAN59_RS08810	PF00132	Bacterial transferase hexapeptide (six repeats)
AhaeAN59_RS08810	PF04613	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD  
AhaeAN59_RS08820	PF01103	Surface antigen
AhaeAN59_RS08820	PF07244	Surface antigen variable number repeat
AhaeAN59_RS08825	PF17820	PDZ domain
AhaeAN59_RS08825	PF02163	Peptidase family M50
AhaeAN59_RS08825	PF13180	PDZ domain
AhaeAN59_RS08830	PF13288	DXP reductoisomerase C-terminal domain
AhaeAN59_RS08830	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain
AhaeAN59_RS08830	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
AhaeAN59_RS08840	PF01255	Putative undecaprenyl diphosphate synthase
AhaeAN59_RS08845	PF01765	Ribosome recycling factor
AhaeAN59_RS08850	PF00696	Amino acid kinase family
AhaeAN59_RS08855	PF00919	Uncharacterized protein family UPF0004
AhaeAN59_RS08855	PF18693	TRAM domain
AhaeAN59_RS08855	PF04055	Radical SAM superfamily
AhaeAN59_RS08860	PF00512	His Kinase A (phospho-acceptor) domain
AhaeAN59_RS08860	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AhaeAN59_RS08860	PF00989	PAS fold
AhaeAN59_RS08865	PF00072	Response regulator receiver domain
AhaeAN59_RS08865	PF02954	Bacterial regulatory protein, Fis family
AhaeAN59_RS08865	PF00158	Sigma-54 interaction domain
AhaeAN59_RS08870	PF00440	Bacterial regulatory proteins, tetR family
AhaeAN59_RS08875	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
AhaeAN59_RS08875	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
AhaeAN59_RS08885	PF02542	YgbB family
AhaeAN59_RS08900	PF01266	FAD dependent oxidoreductase
AhaeAN59_RS08910	PF10415	Fumarase C C-terminus
AhaeAN59_RS08910	PF00206	Lyase
AhaeAN59_RS08915	PF16363	GDP-mannose 4,6 dehydratase
AhaeAN59_RS08920	PF02635	DsrE/DsrF-like family
AhaeAN59_RS08940	PF00892	EamA-like transporter family
AhaeAN59_RS08945	PF00155	Aminotransferase class I and II
AhaeAN59_RS08945	PF00392	Bacterial regulatory proteins, gntR family
AhaeAN59_RS08950	PF01638	HxlR-like helix-turn-helix
AhaeAN59_RS08955	PF03454	MoeA C-terminal region (domain IV)
AhaeAN59_RS08955	PF00994	Probable molybdopterin binding domain
AhaeAN59_RS08955	PF03453	MoeA N-terminal region (domain I and II)
AhaeAN59_RS08960	PF00994	Probable molybdopterin binding domain
AhaeAN59_RS08960	PF01967	MoaC family
AhaeAN59_RS08965	PF02391	MoaE protein
AhaeAN59_RS08975	PF06463	Molybdenum Cofactor Synthesis C
AhaeAN59_RS08975	PF04055	Radical SAM superfamily
AhaeAN59_RS08980	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
AhaeAN59_RS08980	PF00384	Molybdopterin oxidoreductase
AhaeAN59_RS08980	PF01568	Molydopterin dinucleotide binding domain
AhaeAN59_RS08985	PF00291	Pyridoxal-phosphate dependent enzyme
AhaeAN59_RS08990	PF12804	MobA-like NTP transferase domain
AhaeAN59_RS08995	PF00384	Molybdopterin oxidoreductase
AhaeAN59_RS08995	PF01568	Molydopterin dinucleotide binding domain
AhaeAN59_RS08995	PF04324	BFD-like [2Fe-2S] binding domain
AhaeAN59_RS08995	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
AhaeAN59_RS09000	PF04324	BFD-like [2Fe-2S] binding domain
AhaeAN59_RS09000	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AhaeAN59_RS09000	PF18267	Rubredoxin NAD+ reductase C-terminal domain
AhaeAN59_RS09000	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
AhaeAN59_RS09000	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
AhaeAN59_RS09005	PF04324	BFD-like [2Fe-2S] binding domain
AhaeAN59_RS09005	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
AhaeAN59_RS09005	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
AhaeAN59_RS09005	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AhaeAN59_RS09005	PF13806	Rieske-like [2Fe-2S] domain
AhaeAN59_RS09005	PF18267	Rubredoxin NAD+ reductase C-terminal domain
AhaeAN59_RS09010	PF07690	Major Facilitator Superfamily
AhaeAN59_RS09020	PF00005	ABC transporter
AhaeAN59_RS09025	PF01220	Dehydroquinase class II
AhaeAN59_RS09030	PF00364	Biotin-requiring enzyme
AhaeAN59_RS09035	PF00289	Biotin carboxylase, N-terminal domain
AhaeAN59_RS09035	PF02785	Biotin carboxylase C-terminal domain
AhaeAN59_RS09035	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
AhaeAN59_RS09045	PF01425	Amidase
AhaeAN59_RS09050	PF00083	Sugar (and other) transporter
AhaeAN59_RS09050	PF07690	Major Facilitator Superfamily
AhaeAN59_RS09055	PF13737	Transposase DDE domain
AhaeAN59_RS09060	PF01645	Conserved region in glutamate synthase
AhaeAN59_RS09075	PF01565	FAD binding domain 
AhaeAN59_RS09075	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
AhaeAN59_RS09080	PF01451	Low molecular weight phosphotyrosine protein phosphatase
AhaeAN59_RS09090	PF00465	Iron-containing alcohol dehydrogenase 
AhaeAN59_RS09095	PF03061	Thioesterase superfamily
AhaeAN59_RS09100	PF12170	DNA polymerase III tau subunit V interacting with alpha
AhaeAN59_RS09100	PF12169	DNA polymerase III subunits gamma and tau domain III
AhaeAN59_RS09100	PF12168	DNA polymerase III subunits tau domain IV DnaB-binding
AhaeAN59_RS09105	PF08007	Cupin superfamily protein
AhaeAN59_RS09130	PF00916	Sulfate permease family
AhaeAN59_RS09130	PF01740	STAS domain
AhaeAN59_RS09135	PF00375	Sodium:dicarboxylate symporter family
AhaeAN59_RS09150	PF00924	Mechanosensitive ion channel
AhaeAN59_RS09165	PF00005	ABC transporter
AhaeAN59_RS09165	PF00664	ABC transporter transmembrane region
AhaeAN59_RS09175	PF12833	Helix-turn-helix domain
AhaeAN59_RS09175	PF12625	Arabinose-binding domain of AraC transcription regulator, N-term
AhaeAN59_RS09180	PF01597	Glycine cleavage H-protein
AhaeAN59_RS09185	PF13737	Transposase DDE domain
AhaeAN59_RS09190	PF00474	Sodium:solute symporter family
AhaeAN59_RS09195	PF01037	Lrp/AsnC ligand binding domain
AhaeAN59_RS09200	PF00171	Aldehyde dehydrogenase family
AhaeAN59_RS09200	PF01619	Proline dehydrogenase
AhaeAN59_RS09200	PF18327	Proline utilization A proline dehydrogenase N-terminal domain 
AhaeAN59_RS09200	PF14850	DNA-binding domain of Proline dehydrogenase
AhaeAN59_RS09205	PF04229	GrpB protein
AhaeAN59_RS09210	PF05958	tRNA (Uracil-5-)-methyltransferase
AhaeAN59_RS09220	PF09992	Phosphodiester glycosidase
AhaeAN59_RS09230	PF09857	Putative toxin of bacterial toxin-antitoxin pair
AhaeAN59_RS09235	PF13508	Acetyltransferase (GNAT) domain
AhaeAN59_RS09240	PF04264	YceI-like domain
AhaeAN59_RS09255	PF00456	Transketolase, thiamine diphosphate binding domain
AhaeAN59_RS09255	PF02780	Transketolase, C-terminal domain
AhaeAN59_RS09255	PF02779	Transketolase, pyrimidine binding domain
AhaeAN59_RS09260	PF00438	S-adenosylmethionine synthetase, N-terminal domain
AhaeAN59_RS09260	PF02772	S-adenosylmethionine synthetase, central domain
AhaeAN59_RS09260	PF02773	S-adenosylmethionine synthetase, C-terminal domain
AhaeAN59_RS09275	PF03891	Domain of unknown function (DUF333)
AhaeAN59_RS09285	PF00313	'Cold-shock' DNA-binding domain
AhaeAN59_RS09295	PF00313	'Cold-shock' DNA-binding domain
AhaeAN59_RS09310	PF02075	Crossover junction endodeoxyribonuclease RuvC
AhaeAN59_RS09315	PF01256	Carbohydrate kinase
AhaeAN59_RS09315	PF03853	YjeF-related protein N-terminus
AhaeAN59_RS09320	PF08331	Domain of unknown function (DUF1730)
AhaeAN59_RS09325	PF06968	Biotin and Thiamin Synthesis associated domain
AhaeAN59_RS09325	PF04055	Radical SAM superfamily
AhaeAN59_RS09340	PF16970	Type-1 fimbrial protein, A
AhaeAN59_RS09345	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
AhaeAN59_RS09345	PF02753	Pili assembly chaperone PapD, C-terminal domain
AhaeAN59_RS09350	PF00577	Outer membrane usher protein
AhaeAN59_RS09350	PF13954	PapC N-terminal domain
AhaeAN59_RS09350	PF13953	PapC C-terminal domain
AhaeAN59_RS09355	PF00419	Fimbrial protein
AhaeAN59_RS09380	PF01553	Acyltransferase
AhaeAN59_RS09385	PF01709	Transcriptional regulator
AhaeAN59_RS09400	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
AhaeAN59_RS09405	PF00800	Prephenate dehydratase
AhaeAN59_RS09405	PF01817	Chorismate mutase type II
AhaeAN59_RS09405	PF01842	ACT domain
AhaeAN59_RS09415	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AhaeAN59_RS09415	PF02770	Acyl-CoA dehydrogenase, middle domain
AhaeAN59_RS09415	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AhaeAN59_RS09420	PF00591	Glycosyl transferase family, a/b domain
AhaeAN59_RS09420	PF02885	Glycosyl transferase family, helical bundle domain
AhaeAN59_RS09440	PF04717	Type VI secretion system, phage-baseplate injector
AhaeAN59_RS09445	PF07023	Protein of unknown function (DUF1315)
AhaeAN59_RS09450	PF01513	ATP-NAD kinase
AhaeAN59_RS09455	PF00912	Transglycosylase
AhaeAN59_RS09455	PF00905	Penicillin binding protein transpeptidase domain
AhaeAN59_RS09455	PF14814	Bifunctional transglycosylase second domain
AhaeAN59_RS09465	PF00293	NUDIX domain
AhaeAN59_RS09475	PF00512	His Kinase A (phospho-acceptor) domain
AhaeAN59_RS09475	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AhaeAN59_RS09475	PF08521	Two-component sensor kinase N-terminal
AhaeAN59_RS09480	PF00486	Transcriptional regulatory protein, C terminal
AhaeAN59_RS09480	PF00072	Response regulator receiver domain
AhaeAN59_RS09490	PF00437	Type II/IV secretion system protein
AhaeAN59_RS09495	PF01980	tRNA-methyltransferase O
AhaeAN59_RS09495	PF18389	TrmO C-terminal domain
AhaeAN59_RS09500	PF00175	Oxidoreductase NAD-binding domain 
AhaeAN59_RS09500	PF00970	Oxidoreductase FAD-binding domain
AhaeAN59_RS09525	PF04284	Protein of unknown function (DUF441)
AhaeAN59_RS09530	PF03466	LysR substrate binding domain
AhaeAN59_RS09530	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_RS09535	PF02677	Epoxyqueuosine reductase QueH
AhaeAN59_RS09545	PF07690	Major Facilitator Superfamily
AhaeAN59_RS09550	PF01497	Periplasmic binding protein
AhaeAN59_RS09555	PF00005	ABC transporter
AhaeAN59_RS09560	PF01032	FecCD transport family
AhaeAN59_RS09565	PF01032	FecCD transport family
AhaeAN59_RS09575	PF00520	Ion transport protein
AhaeAN59_RS09575	PF00027	Cyclic nucleotide-binding domain
AhaeAN59_RS09580	PF00939	Sodium:sulfate symporter transmembrane region
AhaeAN59_RS09590	PF06434	Aconitate hydratase 2 N-terminus
AhaeAN59_RS09590	PF00330	Aconitase family (aconitate hydratase)
AhaeAN59_RS09590	PF11791	Aconitate B N-terminal domain
AhaeAN59_RS09605	PF01103	Surface antigen
AhaeAN59_RS09605	PF07244	Surface antigen variable number repeat
AhaeAN59_RS09605	PF17243	POTRA domain TamA domain 1
AhaeAN59_RS09610	PF07690	Major Facilitator Superfamily
AhaeAN59_RS09615	PF03232	Ubiquinone biosynthesis protein COQ7
AhaeAN59_RS09630	PF02152	Dihydroneopterin aldolase
AhaeAN59_RS09635	PF03109	ABC1 family
AhaeAN59_RS09640	PF00899	ThiF family
AhaeAN59_RS09650	PF03280	Proteobacterial lipase chaperone protein
AhaeAN59_RS09655	PF00561	alpha/beta hydrolase fold
AhaeAN59_RS09660	PF12625	Arabinose-binding domain of AraC transcription regulator, N-term
AhaeAN59_RS09660	PF12833	Helix-turn-helix domain
AhaeAN59_RS09665	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
AhaeAN59_RS09665	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
AhaeAN59_RS09670	PF00106	short chain dehydrogenase
AhaeAN59_RS09675	PF02311	AraC-like ligand binding domain
AhaeAN59_RS09675	PF12833	Helix-turn-helix domain
AhaeAN59_RS09685	PF13847	Methyltransferase domain
AhaeAN59_RS09685	PF17827	PrmC N-terminal domain
AhaeAN59_RS09690	PF00472	RF-1 domain
AhaeAN59_RS09690	PF03462	PCRF domain
AhaeAN59_RS09705	PF00464	Serine hydroxymethyltransferase
AhaeAN59_RS09745	PF06736	Protein of unknown function (DUF1211)
AhaeAN59_RS09775	PF13382	Adenine deaminase C-terminal domain
AhaeAN59_RS09775	PF01979	Amidohydrolase family
AhaeAN59_RS09785	PF03466	LysR substrate binding domain
AhaeAN59_RS09785	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_RS09790	PF00005	ABC transporter
AhaeAN59_RS09795	PF01061	ABC-2 type transporter
AhaeAN59_RS09800	PF14819	Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term
AhaeAN59_RS09800	PF14489	QueF-like protein
AhaeAN59_RS09810	PF01098	Cell cycle protein
AhaeAN59_RS09815	PF13406	Transglycosylase SLT domain
AhaeAN59_RS09820	PF05036	Sporulation related domain
AhaeAN59_RS09820	PF03330	Lytic transglycolase
AhaeAN59_RS09835	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AhaeAN59_RS09835	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AhaeAN59_RS09840	PF04055	Radical SAM superfamily
AhaeAN59_RS09850	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
AhaeAN59_RS09850	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
AhaeAN59_RS09855	PF00271	Helicase conserved C-terminal domain
AhaeAN59_RS09855	PF07717	Oligonucleotide/oligosaccharide-binding (OB)-fold
AhaeAN59_RS09855	PF04408	Helicase associated domain (HA2)
AhaeAN59_RS09855	PF00270	DEAD/DEAH box helicase
AhaeAN59_RS09855	PF11898	Domain of unknown function (DUF3418)
AhaeAN59_RS09860	PF00578	AhpC/TSA family
AhaeAN59_RS09860	PF10417	C-terminal domain of 1-Cys peroxiredoxin
AhaeAN59_RS09870	PF00487	Fatty acid desaturase
AhaeAN59_RS09880	PF01596	O-methyltransferase
AhaeAN59_RS09890	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AhaeAN59_RS09890	PF13192	Thioredoxin domain
AhaeAN59_RS09900	PF00043	Glutathione S-transferase, C-terminal domain
AhaeAN59_RS09900	PF02798	Glutathione S-transferase, N-terminal domain
AhaeAN59_RS09910	PF02390	Putative methyltransferase 
AhaeAN59_RS09925	PF14493	Helix-turn-helix domain
AhaeAN59_RS09925	PF05970	PIF1-like helicase
AhaeAN59_RS09935	PF13520	Amino acid permease
AhaeAN59_RS09940	PF06751	Ethanolamine ammonia lyase large subunit (EutB)
AhaeAN59_RS09945	PF05985	Ethanolamine ammonia-lyase light chain (EutC)
AhaeAN59_RS09950	PF00117	Glutamine amidotransferase class-I
AhaeAN59_RS09950	PF00958	GMP synthase C terminal domain
AhaeAN59_RS09950	PF02540	NAD synthase
AhaeAN59_RS09955	PF00749	tRNA synthetases class I (E and Q), catalytic domain
AhaeAN59_RS09955	PF03950	tRNA synthetases class I (E and Q), anti-codon binding domain
AhaeAN59_RS09960	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
AhaeAN59_RS09965	PF00149	Calcineurin-like phosphoesterase
AhaeAN59_RS09970	PF00881	Nitroreductase family
AhaeAN59_RS09975	PF02525	Flavodoxin-like fold
AhaeAN59_RS09990	PF17209	Hfq protein
AhaeAN59_RS10000	PF08676	MutL C terminal dimerisation domain
AhaeAN59_RS10000	PF01119	DNA mismatch repair protein, C-terminal domain
AhaeAN59_RS10005	PF02367	Threonylcarbamoyl adenosine biosynthesis protein TsaE
AhaeAN59_RS10010	PF00849	RNA pseudouridylate synthase
AhaeAN59_RS10010	PF01479	S4 domain
AhaeAN59_RS10020	PF00583	Acetyltransferase (GNAT) family
AhaeAN59_RS10025	PF00849	RNA pseudouridylate synthase
AhaeAN59_RS10025	PF01479	S4 domain
AhaeAN59_RS10035	PF00296	Luciferase-like monooxygenase
AhaeAN59_RS10040	PF00990	Diguanylate cyclase, GGDEF domain
AhaeAN59_RS10040	PF00563	EAL domain
AhaeAN59_RS10040	PF03707	Bacterial signalling protein N terminal repeat
AhaeAN59_RS10045	PF03618	Kinase/pyrophosphorylase
AhaeAN59_RS10050	PF02896	PEP-utilising enzyme, TIM barrel domain
AhaeAN59_RS10050	PF00391	PEP-utilising enzyme, mobile domain
AhaeAN59_RS10050	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
AhaeAN59_RS10060	PF06481	COX Aromatic Rich Motif
AhaeAN59_RS10060	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
AhaeAN59_RS10065	PF00115	Cytochrome C and Quinol oxidase polypeptide I
AhaeAN59_RS10070	PF00510	Cytochrome c oxidase subunit III
AhaeAN59_RS10075	PF03626	Prokaryotic Cytochrome C oxidase subunit IV 
AhaeAN59_RS10080	PF01040	UbiA prenyltransferase family
AhaeAN59_RS10085	PF01250	Ribosomal protein S6
AhaeAN59_RS10090	PF01084	Ribosomal protein S18
AhaeAN59_RS10095	PF01281	Ribosomal protein L9, N-terminal domain
AhaeAN59_RS10095	PF03948	Ribosomal protein L9, C-terminal domain
AhaeAN59_RS10100	PF02525	Flavodoxin-like fold
AhaeAN59_RS10105	PF01638	HxlR-like helix-turn-helix
AhaeAN59_RS10110	PF03796	DnaB-like helicase C terminal domain
AhaeAN59_RS10110	PF00772	DnaB-like helicase N terminal domain
AhaeAN59_RS10115	PF00842	Alanine racemase, C-terminal domain
AhaeAN59_RS10115	PF01168	Alanine racemase, N-terminal domain
AhaeAN59_RS10130	PF08379	Bacterial transglutaminase-like N-terminal region
AhaeAN59_RS10130	PF01841	Transglutaminase-like superfamily
AhaeAN59_RS10160	PF00709	Adenylosuccinate synthetase
AhaeAN59_RS10165	PF13393	Histidyl-tRNA synthetase
AhaeAN59_RS10175	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
AhaeAN59_RS10175	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AhaeAN59_RS10180	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
AhaeAN59_RS10180	PF02272	DHHA1 domain
AhaeAN59_RS10180	PF01411	tRNA synthetases class II (A)
AhaeAN59_RS10185	PF13840	ACT domain 
AhaeAN59_RS10185	PF01842	ACT domain
AhaeAN59_RS10185	PF00696	Amino acid kinase family
AhaeAN59_RS10190	PF02599	Global regulator protein family
AhaeAN59_RS10195	PF01351	Ribonuclease HII
AhaeAN59_RS10205	PF01292	Prokaryotic cytochrome b561
AhaeAN59_RS10210	PF00962	Adenosine/AMP deaminase
AhaeAN59_RS10215	PF00860	Permease family
AhaeAN59_RS10250	PF12833	Helix-turn-helix domain
AhaeAN59_RS10250	PF02311	AraC-like ligand binding domain
AhaeAN59_RS10260	PF00893	Small Multidrug Resistance protein
AhaeAN59_RS10265	PF01134	Glucose inhibited division protein A
AhaeAN59_RS10265	PF13932	GidA associated domain
AhaeAN59_RS10290	PF02954	Bacterial regulatory protein, Fis family
AhaeAN59_RS10295	PF02142	MGS-like domain
AhaeAN59_RS10295	PF01808	AICARFT/IMPCHase bienzyme
AhaeAN59_RS10300	PF02843	Phosphoribosylglycinamide synthetase, C domain
AhaeAN59_RS10300	PF02844	Phosphoribosylglycinamide synthetase, N domain
AhaeAN59_RS10300	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
AhaeAN59_RS10305	PF03180	NLPA lipoprotein
AhaeAN59_RS10310	PF00005	ABC transporter
AhaeAN59_RS10310	PF09383	NIL domain
AhaeAN59_RS10315	PF00528	Binding-protein-dependent transport system inner membrane component
AhaeAN59_RS10330	PF00753	Metallo-beta-lactamase superfamily
AhaeAN59_RS10330	PF16123	Hydroxyacylglutathione hydrolase C-terminus
AhaeAN59_RS10340	PF00670	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
AhaeAN59_RS10340	PF05221	S-adenosyl-L-homocysteine hydrolase
AhaeAN59_RS10345	PF02219	Methylenetetrahydrofolate reductase
AhaeAN59_RS10350	PF04452	RNA methyltransferase
AhaeAN59_RS10355	PF00563	EAL domain
AhaeAN59_RS10355	PF00990	Diguanylate cyclase, GGDEF domain
AhaeAN59_RS10355	PF03707	Bacterial signalling protein N terminal repeat
AhaeAN59_RS10360	PF01515	Phosphate acetyl/butaryl transferase
AhaeAN59_RS10360	PF03949	Malic enzyme, NAD binding domain
AhaeAN59_RS10360	PF00390	Malic enzyme, N-terminal domain
AhaeAN59_RS10365	PF12627	Probable RNA and SrmB- binding site of polymerase A
AhaeAN59_RS10365	PF01743	Poly A polymerase head domain
AhaeAN59_RS10375	PF00889	Elongation factor TS
AhaeAN59_RS10380	PF00318	Ribosomal protein S2
AhaeAN59_RS10385	PF00557	Metallopeptidase family M24
AhaeAN59_RS10395	PF07690	Major Facilitator Superfamily
AhaeAN59_RS10405	PF13180	PDZ domain
AhaeAN59_RS10410	PF01784	NIF3 (NGG1p interacting factor 3)
AhaeAN59_RS10415	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
AhaeAN59_RS10415	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
AhaeAN59_RS10420	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
AhaeAN59_RS10420	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
AhaeAN59_RS10455	PF01040	UbiA prenyltransferase family
AhaeAN59_RS10460	PF04345	Chorismate lyase
AhaeAN59_RS10470	PF00117	Glutamine amidotransferase class-I
AhaeAN59_RS10480	PF03473	MOSC domain
AhaeAN59_RS10480	PF00111	2Fe-2S iron-sulfur cluster binding domain
AhaeAN59_RS10480	PF03476	MOSC N-terminal beta barrel domain
AhaeAN59_RS10485	PF00591	Glycosyl transferase family, a/b domain
AhaeAN59_RS10485	PF02885	Glycosyl transferase family, helical bundle domain
AhaeAN59_RS10490	PF00218	Indole-3-glycerol phosphate synthase
AhaeAN59_RS10505	PF01227	GTP cyclohydrolase I
AhaeAN59_RS10525	PF05675	Protein of unknown function (DUF817)
AhaeAN59_RS10530	PF01208	Uroporphyrinogen decarboxylase (URO-D)
AhaeAN59_RS10540	PF00990	Diguanylate cyclase, GGDEF domain
AhaeAN59_RS10540	PF00563	EAL domain
AhaeAN59_RS10540	PF00360	Phytochrome region
AhaeAN59_RS10540	PF01590	GAF domain
AhaeAN59_RS10545	PF01979	Amidohydrolase family
AhaeAN59_RS10550	PF00929	Exonuclease
AhaeAN59_RS10560	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
AhaeAN59_RS10560	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AhaeAN59_RS10565	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AhaeAN59_RS10565	PF00005	ABC transporter
AhaeAN59_RS10570	PF00528	Binding-protein-dependent transport system inner membrane component
AhaeAN59_RS10570	PF12911	N-terminal TM domain of oligopeptide transport permease C
AhaeAN59_RS10575	PF00528	Binding-protein-dependent transport system inner membrane component
AhaeAN59_RS10580	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AhaeAN59_RS10585	PF01464	Transglycosylase SLT domain
AhaeAN59_RS10585	PF01476	LysM domain
AhaeAN59_RS10585	PF01476	LysM domain
AhaeAN59_RS10585	PF01464	Transglycosylase SLT domain
AhaeAN59_RS10590	PF00929	Exonuclease
AhaeAN59_RS10600	PF09297	NADH pyrophosphatase zinc ribbon domain
AhaeAN59_RS10600	PF00293	NUDIX domain
AhaeAN59_RS10605	PF07859	alpha/beta hydrolase fold
AhaeAN59_RS10610	PF04972	BON domain
AhaeAN59_RS10615	PF02021	Uncharacterised protein family UPF0102
AhaeAN59_RS10625	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
AhaeAN59_RS10630	PF03466	LysR substrate binding domain
AhaeAN59_RS10630	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_RS10635	PF01810	LysE type translocator
AhaeAN59_RS10645	PF01494	FAD binding domain
AhaeAN59_RS10650	PF01494	FAD binding domain
AhaeAN59_RS10655	PF05195	Aminopeptidase P, N-terminal domain
AhaeAN59_RS10655	PF00557	Metallopeptidase family M24
AhaeAN59_RS10660	PF03695	Uncharacterised protein family (UPF0149)
AhaeAN59_RS10695	PF13411	MerR HTH family regulatory protein
AhaeAN59_RS10705	PF01812	5-formyltetrahydrofolate cyclo-ligase family
AhaeAN59_RS10710	PF02190	ATP-dependent protease La (LON) substrate-binding domain 
AhaeAN59_RS10710	PF05362	Lon protease (S16) C-terminal proteolytic domain
AhaeAN59_RS10710	PF00004	ATPase family associated with various cellular activities (AAA)
AhaeAN59_RS10715	PF02590	Predicted SPOUT methyltransferase
AhaeAN59_RS10720	PF02900	Catalytic LigB subunit of aromatic ring-opening dioxygenase
AhaeAN59_RS10730	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AhaeAN59_RS10730	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
AhaeAN59_RS10750	PF13737	Transposase DDE domain
AhaeAN59_RS10760	PF04060	Putative Fe-S cluster
AhaeAN59_RS10765	PF00633	Helix-hairpin-helix motif
AhaeAN59_RS10765	PF10576	Iron-sulfur binding domain of endonuclease III
AhaeAN59_RS10765	PF00730	HhH-GPD superfamily base excision DNA repair protein
AhaeAN59_RS10775	PF05191	Adenylate kinase, active site lid
AhaeAN59_RS10790	PF00905	Penicillin binding protein transpeptidase domain
AhaeAN59_RS10790	PF03717	Penicillin-binding Protein dimerisation domain
AhaeAN59_RS10820	PF08496	Peptidase family S49 N-terminal
AhaeAN59_RS10820	PF01343	Peptidase family S49
AhaeAN59_RS10825	PF00005	ABC transporter
AhaeAN59_RS10830	PF00528	Binding-protein-dependent transport system inner membrane component
AhaeAN59_RS10835	PF00528	Binding-protein-dependent transport system inner membrane component
AhaeAN59_RS10845	PF00355	Rieske [2Fe-2S] domain
AhaeAN59_RS10850	PF00282	Pyridoxal-dependent decarboxylase conserved domain
AhaeAN59_RS10855	PF00202	Aminotransferase class-III
AhaeAN59_RS10865	PF07715	TonB-dependent Receptor Plug Domain
AhaeAN59_RS10865	PF07660	Secretin and TonB N terminus short domain
AhaeAN59_RS10865	PF00593	TonB dependent receptor
AhaeAN59_RS10875	PF00440	Bacterial regulatory proteins, tetR family
AhaeAN59_RS10885	PF00487	Fatty acid desaturase
AhaeAN59_RS10890	PF00111	2Fe-2S iron-sulfur cluster binding domain
AhaeAN59_RS10890	PF00970	Oxidoreductase FAD-binding domain
AhaeAN59_RS10890	PF00175	Oxidoreductase NAD-binding domain 
AhaeAN59_RS10895	PF00440	Bacterial regulatory proteins, tetR family
AhaeAN59_RS10905	PF00210	Ferritin-like domain
AhaeAN59_RS10910	PF18339	RapA N-terminal Tudor like domain 1
AhaeAN59_RS10910	PF00176	SNF2 family N-terminal domain
AhaeAN59_RS10910	PF12137	RNA polymerase recycling family C-terminal
AhaeAN59_RS10910	PF18337	RapA N-terminal Tudor like domain
AhaeAN59_RS10910	PF00271	Helicase conserved C-terminal domain
AhaeAN59_RS10915	PF00849	RNA pseudouridylate synthase
AhaeAN59_RS10925	PF00202	Aminotransferase class-III
AhaeAN59_RS10930	PF02581	Thiamine monophosphate synthase
AhaeAN59_RS10955	PF01699	Sodium/calcium exchanger protein
AhaeAN59_RS10960	PF05193	Peptidase M16 inactive domain
AhaeAN59_RS10960	PF00675	Insulinase (Peptidase family M16)
AhaeAN59_RS10965	PF02567	Phenazine biosynthesis-like protein
AhaeAN59_RS10975	PF00180	Isocitrate/isopropylmalate dehydrogenase
AhaeAN59_RS10980	PF00849	RNA pseudouridylate synthase
AhaeAN59_RS10990	PF03971	Monomeric isocitrate dehydrogenase
AhaeAN59_RS10995	PF00576	HIUase/Transthyretin family
AhaeAN59_RS11005	PF00768	D-alanyl-D-alanine carboxypeptidase
AhaeAN59_RS11005	PF07943	Penicillin-binding protein 5, C-terminal domain
AhaeAN59_RS11010	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AhaeAN59_RS11015	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AhaeAN59_RS11020	PF03441	FAD binding domain of DNA photolyase
AhaeAN59_RS11020	PF00875	DNA photolyase
AhaeAN59_RS11040	PF01654	Cytochrome bd terminal oxidase subunit I
AhaeAN59_RS11045	PF02322	Cytochrome bd terminal oxidase subunit II
AhaeAN59_RS11050	PF03060	Nitronate monooxygenase
AhaeAN59_RS11055	PF13090	Polyphosphate kinase C-terminal domain 2
AhaeAN59_RS11055	PF02503	Polyphosphate kinase middle domain
AhaeAN59_RS11055	PF17941	Polyphosphate kinase C-terminal domain 1
AhaeAN59_RS11055	PF13089	Polyphosphate kinase N-terminal domain
AhaeAN59_RS11060	PF00912	Transglycosylase
AhaeAN59_RS11065	PF01694	Rhomboid family
AhaeAN59_RS11080	PF00005	ABC transporter
AhaeAN59_RS11085	PF03050	Transposase IS66 family 
AhaeAN59_RS11085	PF13007	Transposase C of IS166 homeodomain
AhaeAN59_RS11085	PF13005	zinc-finger binding domain of transposase IS66 
AhaeAN59_RS11085	PF13817	IS66 C-terminal element
AhaeAN59_RS11100	PF13472	GDSL-like Lipase/Acylhydrolase family
AhaeAN59_RS11105	PF00583	Acetyltransferase (GNAT) family
AhaeAN59_RS11110	PF00484	Carbonic anhydrase
AhaeAN59_RS11115	PF00561	alpha/beta hydrolase fold
AhaeAN59_RS11140	PF01106	NifU-like domain
AhaeAN59_RS11140	PF01521	Iron-sulphur cluster biosynthesis
AhaeAN59_RS11155	PF00152	tRNA synthetases class II (D, K and N) 
AhaeAN59_RS11160	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
AhaeAN59_RS11160	PF11890	Domain of unknown function (DUF3410)
AhaeAN59_RS11160	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AhaeAN59_RS11165	PF01219	Prokaryotic diacylglycerol kinase
AhaeAN59_RS11175	PF00589	Phage integrase family
AhaeAN59_RS11175	PF13356	Arm DNA-binding domain
AhaeAN59_RS11185	PF12161	HsdM N-terminal domain
AhaeAN59_RS11185	PF02384	N-6 DNA Methylase
AhaeAN59_RS11190	PF01420	Type I restriction modification DNA specificity domain
AhaeAN59_RS11195	PF08463	EcoEI R protein C-terminal
AhaeAN59_RS11195	PF00271	Helicase conserved C-terminal domain
AhaeAN59_RS11195	PF04851	Type III restriction enzyme, res subunit
AhaeAN59_RS11195	PF04313	Type I restriction enzyme R protein N terminus (HSDR_N)
AhaeAN59_RS11265	PF00120	Glutamine synthetase, catalytic domain
AhaeAN59_RS11270	PF00486	Transcriptional regulatory protein, C terminal
AhaeAN59_RS11270	PF00072	Response regulator receiver domain
AhaeAN59_RS11275	PF02702	Osmosensitive K+ channel His kinase sensor domain
AhaeAN59_RS11275	PF00512	His Kinase A (phospho-acceptor) domain
AhaeAN59_RS11275	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AhaeAN59_RS11275	PF13493	Domain of unknown function (DUF4118)
AhaeAN59_RS11280	PF02669	K+-transporting ATPase, c chain
AhaeAN59_RS11290	PF03814	Potassium-transporting ATPase A subunit
AhaeAN59_RS11295	PF02080	TrkA-C domain
AhaeAN59_RS11295	PF02254	TrkA-N domain
AhaeAN59_RS11300	PF02386	Cation transport protein
AhaeAN59_RS11320	PF00872	Transposase, Mutator family
AhaeAN59_RS11370	PF03389	MobA/MobL family
AhaeAN59_RS11380	PF01695	IstB-like ATP binding protein
AhaeAN59_RS11385	PF08281	Sigma-70, region 4
AhaeAN59_RS11385	PF00665	Integrase core domain
AhaeAN59_RS11405	PF00459	Inositol monophosphatase family
AhaeAN59_RS11410	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
AhaeAN59_RS11435	PF00118	TCP-1/cpn60 chaperonin family
AhaeAN59_RS11440	PF00166	Chaperonin 10 Kd subunit
AhaeAN59_RS11445	PF00149	Calcineurin-like phosphoesterase
AhaeAN59_RS11450	PF00781	Diacylglycerol kinase catalytic domain
AhaeAN59_RS11455	PF00821	Phosphoenolpyruvate carboxykinase C-terminal P-loop domain
AhaeAN59_RS11455	PF17297	Phosphoenolpyruvate carboxykinase N-terminal domain
AhaeAN59_RS11470	PF13737	Transposase DDE domain
AhaeAN59_RS11480	PF13737	Transposase DDE domain
AhaeAN59_RS11490	PF07660	Secretin and TonB N terminus short domain
AhaeAN59_RS11490	PF00593	TonB dependent receptor
AhaeAN59_RS11490	PF07715	TonB-dependent Receptor Plug Domain
AhaeAN59_RS11495	PF16901	C-terminal domain of alpha-glycerophosphate oxidase
AhaeAN59_RS11495	PF01266	FAD dependent oxidoreductase
AhaeAN59_RS11500	PF08220	DeoR-like helix-turn-helix domain
AhaeAN59_RS11500	PF00455	DeoR C terminal sensor domain
AhaeAN59_RS11505	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
AhaeAN59_RS11505	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
AhaeAN59_RS11515	PF14542	GCN5-related N-acetyl-transferase
AhaeAN59_RS11525	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
AhaeAN59_RS11525	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
AhaeAN59_RS11540	PF05656	Protein of unknown function (DUF805)
AhaeAN59_RS11555	PF13737	Transposase DDE domain
AhaeAN59_RS11575	PF09423	PhoD-like phosphatase
AhaeAN59_RS11575	PF16655	PhoD-like phosphatase, N-terminal domain
AhaeAN59_RS11590	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AhaeAN59_RS11595	PF07152	YaeQ protein
AhaeAN59_RS11600	PF07683	Cobalamin synthesis protein cobW C-terminal domain
AhaeAN59_RS11600	PF02492	CobW/HypB/UreG, nucleotide-binding domain
AhaeAN59_RS11610	PF03061	Thioesterase superfamily
AhaeAN59_RS11630	PF07690	Major Facilitator Superfamily
AhaeAN59_RS11635	PF00378	Enoyl-CoA hydratase/isomerase
AhaeAN59_RS11640	PF00171	Aldehyde dehydrogenase family
AhaeAN59_RS11650	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AhaeAN59_RS11650	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AhaeAN59_RS11650	PF02770	Acyl-CoA dehydrogenase, middle domain
AhaeAN59_RS11655	PF03573	outer membrane porin, OprD family
AhaeAN59_RS11665	PF07519	Tannase and feruloyl esterase
AhaeAN59_RS11670	PF01494	FAD binding domain
AhaeAN59_RS11690	PF00390	Malic enzyme, N-terminal domain
AhaeAN59_RS11690	PF03949	Malic enzyme, NAD binding domain
AhaeAN59_RS11695	PF00324	Amino acid permease
AhaeAN59_RS11700	PF04952	Succinylglutamate desuccinylase / Aspartoacylase family
AhaeAN59_RS11705	PF04996	Succinylarginine dihydrolase
AhaeAN59_RS11710	PF00171	Aldehyde dehydrogenase family
AhaeAN59_RS11715	PF04958	Arginine N-succinyltransferase beta subunit
AhaeAN59_RS11720	PF00202	Aminotransferase class-III
AhaeAN59_RS11725	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AhaeAN59_RS11725	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
AhaeAN59_RS11735	PF09317	Domain of unknown function (DUF1974)
AhaeAN59_RS11735	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AhaeAN59_RS11735	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AhaeAN59_RS11740	PF00465	Iron-containing alcohol dehydrogenase 
AhaeAN59_RS11745	PF13382	Adenine deaminase C-terminal domain
AhaeAN59_RS11745	PF01979	Amidohydrolase family
AhaeAN59_RS11755	PF00171	Aldehyde dehydrogenase family
AhaeAN59_RS11770	PF02798	Glutathione S-transferase, N-terminal domain
AhaeAN59_RS11795	PF07690	Major Facilitator Superfamily
AhaeAN59_RS11800	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
AhaeAN59_RS11800	PF00529	HlyD membrane-fusion protein of T1SS
AhaeAN59_RS11805	PF03061	Thioesterase superfamily
AhaeAN59_RS11810	PF00490	Delta-aminolevulinic acid dehydratase
AhaeAN59_RS11815	PF01266	FAD dependent oxidoreductase
AhaeAN59_RS11820	PF08338	Domain of unknown function (DUF1731)
AhaeAN59_RS11820	PF01370	NAD dependent epimerase/dehydratase family
AhaeAN59_RS11835	PF00378	Enoyl-CoA hydratase/isomerase
AhaeAN59_RS11870	PF00149	Calcineurin-like phosphoesterase
AhaeAN59_RS11870	PF12320	Type 5 capsule protein repressor C-terminal domain
AhaeAN59_RS11885	PF13419	Haloacid dehalogenase-like hydrolase
AhaeAN59_RS11890	PF01168	Alanine racemase, N-terminal domain
AhaeAN59_RS11895	PF00437	Type II/IV secretion system protein
AhaeAN59_RS11900	PF00437	Type II/IV secretion system protein
AhaeAN59_RS11905	PF01475	Ferric uptake regulator family
AhaeAN59_RS11910	PF04355	SmpA / OmlA family
AhaeAN59_RS11915	PF03658	RnfH family Ubiquitin
AhaeAN59_RS11925	PF01814	Hemerythrin HHE cation binding domain
AhaeAN59_RS11930	PF13230	Glutamine amidotransferases class-II
AhaeAN59_RS11940	PF00696	Amino acid kinase family
AhaeAN59_RS11945	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
AhaeAN59_RS11945	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
AhaeAN59_RS11945	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
AhaeAN59_RS11945	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
AhaeAN59_RS11950	PF00692	dUTPase
AhaeAN59_RS11955	PF00580	UvrD/REP helicase N-terminal domain
AhaeAN59_RS11955	PF13361	UvrD-like helicase C-terminal domain
AhaeAN59_RS11960	PF13488	Glycine zipper
AhaeAN59_RS11960	PF00691	OmpA family
AhaeAN59_RS11965	PF01553	Acyltransferase
AhaeAN59_RS11975	PF03775	Septum formation inhibitor MinC, C-terminal domain
AhaeAN59_RS11980	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
AhaeAN59_RS11985	PF03776	Septum formation topological specificity factor MinE
AhaeAN59_RS11995	PF01810	LysE type translocator
AhaeAN59_RS12000	PF17854	FtsK alpha domain
AhaeAN59_RS12000	PF01580	FtsK/SpoIIIE family
AhaeAN59_RS12000	PF13491	4TM region of DNA translocase FtsK/SpoIIIE
AhaeAN59_RS12000	PF09397	Ftsk gamma domain
AhaeAN59_RS12005	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AhaeAN59_RS12010	PF03588	Leucyl/phenylalanyl-tRNA protein transferase
AhaeAN59_RS12015	PF04377	Arginine-tRNA-protein transferase, C terminus
AhaeAN59_RS12015	PF04376	Arginine-tRNA-protein transferase, N terminus
AhaeAN59_RS12020	PF00583	Acetyltransferase (GNAT) family
AhaeAN59_RS12035	PF00009	Elongation factor Tu GTP binding domain
AhaeAN59_RS12035	PF03144	Elongation factor Tu domain 2
AhaeAN59_RS12035	PF03143	Elongation factor Tu C-terminal domain
AhaeAN59_RS12040	PF03764	Elongation factor G, domain IV
AhaeAN59_RS12040	PF03144	Elongation factor Tu domain 2
AhaeAN59_RS12040	PF14492	Elongation Factor G, domain II
AhaeAN59_RS12040	PF00679	Elongation factor G C-terminus
AhaeAN59_RS12040	PF00009	Elongation factor Tu GTP binding domain
AhaeAN59_RS12045	PF00177	Ribosomal protein S7p/S5e
AhaeAN59_RS12050	PF00164	Ribosomal protein S12/S23
AhaeAN59_RS12060	PF02801	Beta-ketoacyl synthase, C-terminal domain
AhaeAN59_RS12060	PF00109	Beta-ketoacyl synthase, N-terminal domain
AhaeAN59_RS12080	PF02540	NAD synthase
AhaeAN59_RS12080	PF00795	Carbon-nitrogen hydrolase
AhaeAN59_RS12105	PF00037	4Fe-4S binding domain
AhaeAN59_RS12110	PF01467	Cytidylyltransferase-like
AhaeAN59_RS12115	PF00589	Phage integrase family
AhaeAN59_RS12115	PF14659	Phage integrase, N-terminal SAM-like domain
AhaeAN59_RS12115	PF13356	Arm DNA-binding domain
AhaeAN59_RS12135	PF13005	zinc-finger binding domain of transposase IS66 
AhaeAN59_RS12135	PF13007	Transposase C of IS166 homeodomain
AhaeAN59_RS12135	PF13817	IS66 C-terminal element
AhaeAN59_RS12135	PF03050	Transposase IS66 family 
AhaeAN59_RS12150	PF00873	AcrB/AcrD/AcrF family
AhaeAN59_RS12155	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
AhaeAN59_RS12170	PF07664	Ferrous iron transport protein B C terminus
AhaeAN59_RS12170	PF07670	Nucleoside recognition
AhaeAN59_RS12170	PF02421	Ferrous iron transport protein B
AhaeAN59_RS12180	PF01545	Cation efflux family
AhaeAN59_RS12205	PF07731	Multicopper oxidase
AhaeAN59_RS12205	PF00394	Multicopper oxidase
AhaeAN59_RS12205	PF07732	Multicopper oxidase
AhaeAN59_RS12215	PF00486	Transcriptional regulatory protein, C terminal
AhaeAN59_RS12215	PF00072	Response regulator receiver domain
AhaeAN59_RS12220	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AhaeAN59_RS12220	PF00672	HAMP domain
AhaeAN59_RS12220	PF00512	His Kinase A (phospho-acceptor) domain
AhaeAN59_RS12245	PF13007	Transposase C of IS166 homeodomain
AhaeAN59_RS12245	PF13817	IS66 C-terminal element
AhaeAN59_RS12245	PF03050	Transposase IS66 family 
AhaeAN59_RS12245	PF13005	zinc-finger binding domain of transposase IS66 
AhaeAN59_RS12335	PF01668	SmpB protein
AhaeAN59_RS12340	PF03358	NADPH-dependent FMN reductase
AhaeAN59_RS12350	PF00849	RNA pseudouridylate synthase
AhaeAN59_RS12350	PF01479	S4 domain
AhaeAN59_RS12355	PF13525	Outer membrane lipoprotein
AhaeAN59_RS12360	PF01807	CHC2 zinc finger
AhaeAN59_RS12360	PF08278	DNA primase DnaG DnaB-binding 
AhaeAN59_RS12360	PF10410	DnaB-helicase binding domain of primase
AhaeAN59_RS12360	PF08275	DNA primase catalytic core, N-terminal domain
AhaeAN59_RS12370	PF00745	Glutamyl-tRNAGlu reductase, dimerisation domain
AhaeAN59_RS12370	PF01488	Shikimate / quinate 5-dehydrogenase
AhaeAN59_RS12370	PF05201	Glutamyl-tRNAGlu reductase, N-terminal domain
AhaeAN59_RS12380	PF03550	Outer membrane lipoprotein LolB
AhaeAN59_RS12385	PF00288	GHMP kinases N terminal domain
AhaeAN59_RS12385	PF08544	GHMP kinases C terminal 
AhaeAN59_RS12395	PF14572	Phosphoribosyl synthetase-associated domain
AhaeAN59_RS12395	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
AhaeAN59_RS12400	PF01386	Ribosomal L25p family
AhaeAN59_RS12405	PF01195	Peptidyl-tRNA hydrolase
AhaeAN59_RS12410	PF02261	Aspartate decarboxylase
AhaeAN59_RS12415	PF00027	Cyclic nucleotide-binding domain
AhaeAN59_RS12415	PF01734	Patatin-like phospholipase
AhaeAN59_RS12430	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
AhaeAN59_RS12435	PF13419	Haloacid dehalogenase-like hydrolase
AhaeAN59_RS12440	PF02581	Thiamine monophosphate synthase
AhaeAN59_RS12440	PF08543	Phosphomethylpyrimidine kinase
AhaeAN59_RS12440	PF03070	TENA/THI-4/PQQC family
AhaeAN59_RS12445	PF00593	TonB dependent receptor
AhaeAN59_RS12445	PF07715	TonB-dependent Receptor Plug Domain
AhaeAN59_RS12450	PF01476	LysM domain
AhaeAN59_RS12450	PF04972	BON domain
AhaeAN59_RS12455	PF00550	Phosphopantetheine attachment site
AhaeAN59_RS12460	PF00550	Phosphopantetheine attachment site
AhaeAN59_RS12470	PF00698	Acyl transferase domain
AhaeAN59_RS12475	PF01783	Ribosomal L32p protein family
AhaeAN59_RS12480	PF02620	Large ribosomal RNA subunit accumulation protein YceD
AhaeAN59_RS12485	PF04315	Elongation factor P hydroxylase
AhaeAN59_RS12490	PF01300	Telomere recombination
AhaeAN59_RS12510	PF02616	Segregation and condensation protein ScpA
AhaeAN59_RS12515	PF04079	Segregation and condensation complex subunit ScpB
AhaeAN59_RS12520	PF01479	S4 domain
AhaeAN59_RS12520	PF00849	RNA pseudouridylate synthase
AhaeAN59_RS12525	PF00005	ABC transporter
AhaeAN59_RS12525	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AhaeAN59_RS12530	PF00528	Binding-protein-dependent transport system inner membrane component
AhaeAN59_RS12530	PF12911	N-terminal TM domain of oligopeptide transport permease C
AhaeAN59_RS12535	PF00528	Binding-protein-dependent transport system inner membrane component
AhaeAN59_RS12545	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AhaeAN59_RS12555	PF07715	TonB-dependent Receptor Plug Domain
AhaeAN59_RS12555	PF00593	TonB dependent receptor
AhaeAN59_RS12565	PF01618	MotA/TolQ/ExbB proton channel family
AhaeAN59_RS12570	PF02472	Biopolymer transport protein ExbD/TolR
AhaeAN59_RS12575	PF02472	Biopolymer transport protein ExbD/TolR
AhaeAN59_RS12595	PF00155	Aminotransferase class I and II
AhaeAN59_RS12600	PF06968	Biotin and Thiamin Synthesis associated domain
AhaeAN59_RS12600	PF00202	Aminotransferase class-III
AhaeAN59_RS12600	PF04055	Radical SAM superfamily
AhaeAN59_RS12605	PF00561	alpha/beta hydrolase fold
AhaeAN59_RS12615	PF00578	AhpC/TSA family
AhaeAN59_RS12620	PF00210	Ferritin-like domain
AhaeAN59_RS12630	PF03120	NAD-dependent DNA ligase OB-fold domain
AhaeAN59_RS12630	PF00533	BRCA1 C Terminus (BRCT) domain
AhaeAN59_RS12630	PF01653	NAD-dependent DNA ligase adenylation domain
AhaeAN59_RS12630	PF12826	Helix-hairpin-helix motif
AhaeAN59_RS12630	PF03119	NAD-dependent DNA ligase C4 zinc finger domain
AhaeAN59_RS12640	PF06470	SMC proteins Flexible Hinge Domain
AhaeAN59_RS12640	PF02463	RecF/RecN/SMC N terminal domain
AhaeAN59_RS12650	PF01925	Sulfite exporter TauE/SafE
AhaeAN59_RS12660	PF03309	Type III pantothenate kinase
AhaeAN59_RS12670	PF02978	Signal peptide binding domain
AhaeAN59_RS12670	PF00448	SRP54-type protein, GTPase domain
AhaeAN59_RS12670	PF02881	SRP54-type protein, helical bundle domain
AhaeAN59_RS12680	PF01207	Dihydrouridine synthase (Dus)
AhaeAN59_RS12705	PF13817	IS66 C-terminal element
AhaeAN59_RS12705	PF13005	zinc-finger binding domain of transposase IS66 
AhaeAN59_RS12705	PF13007	Transposase C of IS166 homeodomain
AhaeAN59_RS12705	PF03050	Transposase IS66 family 
AhaeAN59_RS12745	PF00692	dUTPase
AhaeAN59_RS12765	PF16868	NMT1-like family
AhaeAN59_RS12780	PF01048	Phosphorylase superfamily
AhaeAN59_RS12785	PF10609	NUBPL iron-transfer P-loop NTPase
AhaeAN59_RS12795	PF13302	Acetyltransferase (GNAT) domain
AhaeAN59_RS12805	PF09334	tRNA synthetases class I (M)
AhaeAN59_RS12805	PF01588	Putative tRNA binding domain
AhaeAN59_RS12815	PF10996	Beta-Casp domain
AhaeAN59_RS12815	PF07521	Zn-dependent metallo-hydrolase RNA specificity domain
AhaeAN59_RS12815	PF00753	Metallo-beta-lactamase superfamily
AhaeAN59_RS12830	PF13533	Biotin-lipoyl like
AhaeAN59_RS12835	PF00291	Pyridoxal-phosphate dependent enzyme
AhaeAN59_RS12845	PF05552	Conserved TM helix
AhaeAN59_RS12860	PF00970	Oxidoreductase FAD-binding domain
AhaeAN59_RS12860	PF00175	Oxidoreductase NAD-binding domain 
AhaeAN59_RS12865	PF03466	LysR substrate binding domain
AhaeAN59_RS12865	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_RS12870	PF00313	'Cold-shock' DNA-binding domain
AhaeAN59_RS12885	PF00361	Proton-conducting membrane transporter
AhaeAN59_RS12890	PF00361	Proton-conducting membrane transporter
AhaeAN59_RS12895	PF00361	Proton-conducting membrane transporter
AhaeAN59_RS12895	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
AhaeAN59_RS12900	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
AhaeAN59_RS12905	PF00499	NADH-ubiquinone/plastoquinone oxidoreductase chain 6
AhaeAN59_RS12910	PF12838	4Fe-4S dicluster domain
AhaeAN59_RS12915	PF00146	NADH dehydrogenase
AhaeAN59_RS12920	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
AhaeAN59_RS12920	PF00384	Molybdopterin oxidoreductase
AhaeAN59_RS12920	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
AhaeAN59_RS12925	PF10589	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
AhaeAN59_RS12925	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
AhaeAN59_RS12925	PF10531	SLBB domain
AhaeAN59_RS12935	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
AhaeAN59_RS12935	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
AhaeAN59_RS12940	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
AhaeAN59_RS12945	PF00507	NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
AhaeAN59_RS12960	PF00672	HAMP domain
AhaeAN59_RS12960	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AhaeAN59_RS12960	PF00512	His Kinase A (phospho-acceptor) domain
AhaeAN59_RS12965	PF00486	Transcriptional regulatory protein, C terminal
AhaeAN59_RS12965	PF00072	Response regulator receiver domain
AhaeAN59_RS12970	PF02867	Ribonucleotide reductase, barrel domain
AhaeAN59_RS12970	PF00317	Ribonucleotide reductase, all-alpha domain
AhaeAN59_RS12970	PF03477	ATP cone domain
AhaeAN59_RS12980	PF00268	Ribonucleotide reductase, small chain
AhaeAN59_RS13010	PF02445	Quinolinate synthetase A protein
AhaeAN59_RS13015	PF01960	ArgJ family
AhaeAN59_RS13020	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
AhaeAN59_RS13020	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
AhaeAN59_RS13025	PF00893	Small Multidrug Resistance protein
AhaeAN59_RS13040	PF05275	Copper resistance protein B precursor (CopB)
AhaeAN59_RS13045	PF07732	Multicopper oxidase
AhaeAN59_RS13045	PF00394	Multicopper oxidase
AhaeAN59_RS13045	PF07731	Multicopper oxidase
AhaeAN59_RS13055	PF00834	Ribulose-phosphate 3 epimerase family
AhaeAN59_RS13065	PF00756	Putative esterase
AhaeAN59_RS13075	PF04445	Putative SAM-dependent methyltransferase
AhaeAN59_RS13080	PF02673	Bacitracin resistance protein BacA
AhaeAN59_RS13085	PF00814	Glycoprotease family
AhaeAN59_RS13090	PF00132	Bacterial transferase hexapeptide (six repeats)
AhaeAN59_RS13095	PF00293	NUDIX domain
AhaeAN59_RS13120	PF00425	chorismate binding enzyme
AhaeAN59_RS13120	PF04715	Anthranilate synthase component I, N terminal region
AhaeAN59_RS13125	PF00155	Aminotransferase class I and II
AhaeAN59_RS13130	PF00815	Histidinol dehydrogenase
AhaeAN59_RS13140	PF12680	SnoaL-like domain
AhaeAN59_RS13140	PF04542	Sigma-70 region 2 
AhaeAN59_RS13140	PF08281	Sigma-70, region 4
AhaeAN59_RS13145	PF01634	ATP phosphoribosyltransferase
AhaeAN59_RS13150	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
AhaeAN59_RS13155	PF01722	BolA-like protein
AhaeAN59_RS13160	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
AhaeAN59_RS13165	PF00309	Sigma-54 factor, Activator interacting domain (AID) 
AhaeAN59_RS13165	PF04552	Sigma-54, DNA binding domain
AhaeAN59_RS13165	PF04963	Sigma-54 factor, core binding domain
AhaeAN59_RS13215	PF00795	Carbon-nitrogen hydrolase
AhaeAN59_RS13225	PF02566	OsmC-like protein
AhaeAN59_RS13230	PF00437	Type II/IV secretion system protein
AhaeAN59_RS13250	PF00476	DNA polymerase family A
AhaeAN59_RS13250	PF01367	5'-3' exonuclease, C-terminal SAM fold
AhaeAN59_RS13250	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
AhaeAN59_RS13250	PF01612	3'-5' exonuclease
AhaeAN59_RS13255	PF02325	YGGT family
AhaeAN59_RS13260	PF03807	NADP oxidoreductase coenzyme F420-dependent
AhaeAN59_RS13260	PF14748	Pyrroline-5-carboxylate reductase dimerisation
AhaeAN59_RS13265	PF11734	TilS substrate C-terminal domain
AhaeAN59_RS13265	PF01171	PP-loop family
AhaeAN59_RS13265	PF09179	TilS substrate binding domain
AhaeAN59_RS13270	PF03255	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
AhaeAN59_RS13275	PF02541	Ppx/GppA phosphatase family
AhaeAN59_RS13280	PF00085	Thioredoxin
AhaeAN59_RS13285	PF07497	Rho termination factor, RNA-binding domain
AhaeAN59_RS13285	PF07498	Rho termination factor, N-terminal domain
AhaeAN59_RS13285	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
AhaeAN59_RS13295	PF00216	Bacterial DNA-binding protein
AhaeAN59_RS13300	PF03147	Ferredoxin-fold anticodon binding domain
AhaeAN59_RS13300	PF03483	B3/4 domain
AhaeAN59_RS13300	PF03484	tRNA synthetase B5 domain
AhaeAN59_RS13300	PF01588	Putative tRNA binding domain
AhaeAN59_RS13300	PF17759	Phenylalanyl tRNA synthetase beta chain CLM domain
AhaeAN59_RS13305	PF01409	tRNA synthetases class II core domain (F)
AhaeAN59_RS13305	PF02912	Aminoacyl tRNA synthetase class II, N-terminal domain
AhaeAN59_RS13320	PF00453	Ribosomal protein L20
AhaeAN59_RS13325	PF01632	Ribosomal protein L35
AhaeAN59_RS13330	PF09335	SNARE associated Golgi protein
AhaeAN59_RS13345	PF02798	Glutathione S-transferase, N-terminal domain
AhaeAN59_RS13345	PF00043	Glutathione S-transferase, C-terminal domain
AhaeAN59_RS13355	PF00707	Translation initiation factor IF-3, C-terminal domain
AhaeAN59_RS13355	PF05198	Translation initiation factor IF-3, N-terminal domain
AhaeAN59_RS13360	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
AhaeAN59_RS13360	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
AhaeAN59_RS13360	PF02824	TGS domain
AhaeAN59_RS13360	PF03129	Anticodon binding domain
AhaeAN59_RS13365	PF00501	AMP-binding enzyme
AhaeAN59_RS13365	PF13193	AMP-binding enzyme C-terminal domain
AhaeAN59_RS13370	PF04751	Protein of unknown function (DUF615)
AhaeAN59_RS13375	PF00381	PTS HPr component phosphorylation site
AhaeAN59_RS13380	PF03668	P-loop ATPase protein family
AhaeAN59_RS13385	PF02569	Pantoate-beta-alanine ligase
AhaeAN59_RS13390	PF02548	Ketopantoate hydroxymethyltransferase
AhaeAN59_RS13395	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
AhaeAN59_RS13400	PF12626	Polymerase A arginine-rich C-terminus
AhaeAN59_RS13400	PF12627	Probable RNA and SrmB- binding site of polymerase A
AhaeAN59_RS13400	PF01743	Poly A polymerase head domain
AhaeAN59_RS13410	PF03819	MazG nucleotide pyrophosphohydrolase domain
AhaeAN59_RS13425	PF04607	Region found in RelA / SpoT proteins
AhaeAN59_RS13425	PF13291	ACT domain
AhaeAN59_RS13425	PF02824	TGS domain
AhaeAN59_RS13430	PF05958	tRNA (Uracil-5-)-methyltransferase
AhaeAN59_RS13440	PF00291	Pyridoxal-phosphate dependent enzyme
AhaeAN59_RS13445	PF09984	Uncharacterised signal transduction histidine kinase domain (DUF2222)
AhaeAN59_RS13445	PF00072	Response regulator receiver domain
AhaeAN59_RS13445	PF00512	His Kinase A (phospho-acceptor) domain
AhaeAN59_RS13445	PF01627	Hpt domain
AhaeAN59_RS13445	PF00672	HAMP domain
AhaeAN59_RS13445	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AhaeAN59_RS13450	PF00378	Enoyl-CoA hydratase/isomerase
AhaeAN59_RS13455	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
AhaeAN59_RS13455	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
AhaeAN59_RS13460	PF01261	Xylose isomerase-like TIM barrel
AhaeAN59_RS13470	PF00106	short chain dehydrogenase
AhaeAN59_RS13475	PF02233	NAD(P) transhydrogenase beta subunit
AhaeAN59_RS13480	PF12769	4TM region of pyridine nucleotide transhydrogenase, mitoch
AhaeAN59_RS13485	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
AhaeAN59_RS13485	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
AhaeAN59_RS13490	PF09278	MerR, DNA binding
AhaeAN59_RS13490	PF00376	MerR family regulatory protein
AhaeAN59_RS13500	PF07690	Major Facilitator Superfamily
AhaeAN59_RS13505	PF05721	Phytanoyl-CoA dioxygenase (PhyH)
AhaeAN59_RS13515	PF00202	Aminotransferase class-III
AhaeAN59_RS13520	PF00583	Acetyltransferase (GNAT) family
AhaeAN59_RS13525	PF12802	MarR family
AhaeAN59_RS13530	PF03358	NADPH-dependent FMN reductase
AhaeAN59_RS13535	PF01758	Sodium Bile acid symporter family
AhaeAN59_RS13545	PF01022	Bacterial regulatory protein, arsR family
AhaeAN59_RS13550	PF03960	ArsC family
AhaeAN59_RS13560	PF01207	Dihydrouridine synthase (Dus)
AhaeAN59_RS13570	PF00899	ThiF family
AhaeAN59_RS13580	PF00330	Aconitase family (aconitate hydratase)
AhaeAN59_RS13580	PF00694	Aconitase C-terminal domain
AhaeAN59_RS13585	PF01026	TatD related DNase
AhaeAN59_RS13600	PF03144	Elongation factor Tu domain 2
AhaeAN59_RS13600	PF00009	Elongation factor Tu GTP binding domain
AhaeAN59_RS13600	PF16658	Class II release factor RF3, C-terminal domain
AhaeAN59_RS13605	PF13784	Fic/DOC family N-terminal
AhaeAN59_RS13605	PF02661	Fic/DOC family
AhaeAN59_RS13610	PF04313	Type I restriction enzyme R protein N terminus (HSDR_N)
AhaeAN59_RS13610	PF12008	Type I restriction and modification enzyme - subunit R C terminal
AhaeAN59_RS13610	PF18766	SWI2/SNF2 ATPase
AhaeAN59_RS13620	PF02384	N-6 DNA Methylase
AhaeAN59_RS13620	PF12161	HsdM N-terminal domain
AhaeAN59_RS13775	PF13737	Transposase DDE domain
AhaeAN59_RS13800	PF03707	Bacterial signalling protein N terminal repeat
AhaeAN59_RS13800	PF00563	EAL domain
AhaeAN59_RS13800	PF00990	Diguanylate cyclase, GGDEF domain
AhaeAN59_RS13805	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
AhaeAN59_RS13805	PF07991	Acetohydroxy acid isomeroreductase, NADPH-binding domain
AhaeAN59_RS13810	PF10369	Small subunit of acetolactate synthase
AhaeAN59_RS13815	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
AhaeAN59_RS13815	PF00205	Thiamine pyrophosphate enzyme, central domain
AhaeAN59_RS13815	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
AhaeAN59_RS13825	PF08264	Anticodon-binding domain of tRNA
AhaeAN59_RS13825	PF00133	tRNA synthetases class I (I, L, M and V)
AhaeAN59_RS13825	PF13603	Leucyl-tRNA synthetase, Domain 2
AhaeAN59_RS13825	PF09334	tRNA synthetases class I (M)
AhaeAN59_RS13835	PF06144	DNA polymerase III, delta subunit
AhaeAN59_RS13840	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
AhaeAN59_RS13845	PF12704	MacB-like periplasmic core domain
AhaeAN59_RS13845	PF02687	FtsX-like permease family
AhaeAN59_RS13845	PF00005	ABC transporter
AhaeAN59_RS13850	PF02321	Outer membrane efflux protein
AhaeAN59_RS13875	PF00929	Exonuclease
AhaeAN59_RS13880	PF03193	RsgA GTPase
AhaeAN59_RS13890	PF00462	Glutaredoxin
AhaeAN59_RS13895	PF02556	Preprotein translocase subunit SecB
AhaeAN59_RS13910	PF09859	Oxygenase, catalysing oxidative methylation of damaged DNA
AhaeAN59_RS13915	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
AhaeAN59_RS13915	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
AhaeAN59_RS13925	PF04127	DNA / pantothenate metabolism flavoprotein
AhaeAN59_RS13925	PF02441	Flavoprotein
AhaeAN59_RS13930	PF04002	RadC-like JAB domain
AhaeAN59_RS13935	PF01062	Bestrophin, RFP-TM, chloride channel
AhaeAN59_RS13940	PF02811	PHP domain
AhaeAN59_RS13945	PF04279	Intracellular septation protein A 
AhaeAN59_RS13960	PF01266	FAD dependent oxidoreductase
AhaeAN59_RS13960	PF05430	S-adenosyl-L-methionine-dependent methyltransferase
AhaeAN59_RS13970	PF04461	Protein of unknown function (DUF520)
AhaeAN59_RS13985	PF13185	GAF domain
AhaeAN59_RS13990	PF03061	Thioesterase superfamily
AhaeAN59_RS13995	PF00085	Thioredoxin
AhaeAN59_RS14000	PF00561	alpha/beta hydrolase fold
AhaeAN59_RS14005	PF04273	Putative phosphatase (DUF442)
AhaeAN59_RS14005	PF00753	Metallo-beta-lactamase superfamily
AhaeAN59_RS14055	PF01066	CDP-alcohol phosphatidyltransferase
AhaeAN59_RS14060	PF04378	Ribosomal RNA large subunit methyltransferase D, RlmJ
AhaeAN59_RS14080	PF00056	lactate/malate dehydrogenase, NAD binding domain
AhaeAN59_RS14080	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
AhaeAN59_RS14090	PF01464	Transglycosylase SLT domain
AhaeAN59_RS14090	PF10145	Phage-related minor tail protein
AhaeAN59_RS14090	PF01551	Peptidase family M23
AhaeAN59_RS14095	PF04055	Radical SAM superfamily
AhaeAN59_RS14095	PF00919	Uncharacterized protein family UPF0004
AhaeAN59_RS14095	PF01938	TRAM domain
AhaeAN59_RS14100	PF02562	PhoH-like protein
AhaeAN59_RS14105	PF02130	Uncharacterized protein family UPF0054
AhaeAN59_RS14115	PF07715	TonB-dependent Receptor Plug Domain
AhaeAN59_RS14115	PF00593	TonB dependent receptor
AhaeAN59_RS14140	PF00303	Thymidylate synthase
AhaeAN59_RS14145	PF00186	Dihydrofolate reductase
AhaeAN59_RS14160	PF01625	Peptide methionine sulfoxide reductase
AhaeAN59_RS14170	PF01618	MotA/TolQ/ExbB proton channel family
AhaeAN59_RS14180	PF01842	ACT domain
AhaeAN59_RS14180	PF00551	Formyl transferase
AhaeAN59_RS14185	PF08360	QacR-like protein, C-terminal region
AhaeAN59_RS14185	PF00440	Bacterial regulatory proteins, tetR family
AhaeAN59_RS14190	PF00171	Aldehyde dehydrogenase family
AhaeAN59_RS14195	PF00830	Ribosomal L28 family
AhaeAN59_RS14200	PF00471	Ribosomal protein L33
AhaeAN59_RS14205	PF02254	TrkA-N domain
AhaeAN59_RS14205	PF00999	Sodium/hydrogen exchanger family
AhaeAN59_RS14230	PF13361	UvrD-like helicase C-terminal domain
AhaeAN59_RS14230	PF00580	UvrD/REP helicase N-terminal domain
AhaeAN59_RS14245	PF01396	Topoisomerase DNA binding C4 zinc finger
AhaeAN59_RS14245	PF08272	Topoisomerase I zinc-ribbon-like 
AhaeAN59_RS14245	PF01131	DNA topoisomerase
AhaeAN59_RS14245	PF01751	Toprim domain
AhaeAN59_RS14255	PF01638	HxlR-like helix-turn-helix
AhaeAN59_RS14260	PF00107	Zinc-binding dehydrogenase
AhaeAN59_RS14260	PF08240	Alcohol dehydrogenase GroES-like domain
AhaeAN59_RS14280	PF03279	Bacterial lipid A biosynthesis acyltransferase
AhaeAN59_RS14290	PF01118	Semialdehyde dehydrogenase, NAD binding domain
AhaeAN59_RS14290	PF02774	Semialdehyde dehydrogenase, dimerisation domain
AhaeAN59_RS14310	PF01416	tRNA pseudouridine synthase
AhaeAN59_RS14320	PF01176	Translation initiation factor 1A / IF-1
AhaeAN59_RS14330	PF00180	Isocitrate/isopropylmalate dehydrogenase
AhaeAN59_RS14340	PF00694	Aconitase C-terminal domain
AhaeAN59_RS14345	PF00330	Aconitase family (aconitate hydratase)
AhaeAN59_RS14355	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_RS14355	PF03466	LysR substrate binding domain
AhaeAN59_RS14365	PF00293	NUDIX domain
AhaeAN59_RS14370	PF05524	PEP-utilising enzyme, N-terminal
AhaeAN59_RS14370	PF01590	GAF domain
AhaeAN59_RS14370	PF00391	PEP-utilising enzyme, mobile domain
AhaeAN59_RS14370	PF02896	PEP-utilising enzyme, TIM barrel domain
AhaeAN59_RS14380	PF00141	Peroxidase
AhaeAN59_RS14395	PF12706	Beta-lactamase superfamily domain
AhaeAN59_RS14400	PF02798	Glutathione S-transferase, N-terminal domain
AhaeAN59_RS14415	PF01479	S4 domain
AhaeAN59_RS14415	PF00849	RNA pseudouridylate synthase
AhaeAN59_RS14425	PF00575	S1 RNA binding domain
AhaeAN59_RS14425	PF10150	Ribonuclease E/G family
AhaeAN59_RS14425	PF12111	Polyribonucleotide phosphorylase C terminal
AhaeAN59_RS14430	PF13193	AMP-binding enzyme C-terminal domain
AhaeAN59_RS14430	PF00501	AMP-binding enzyme
AhaeAN59_RS14445	PF04055	Radical SAM superfamily
AhaeAN59_RS14445	PF06969	HemN C-terminal domain
AhaeAN59_RS14455	PF01554	MatE
AhaeAN59_RS14460	PF03109	ABC1 family
AhaeAN59_RS14465	PF01197	Ribosomal protein L31
AhaeAN59_RS14475	PF02537	CrcB-like protein, Camphor Resistance (CrcB)
AhaeAN59_RS14485	PF01613	Flavin reductase like domain
AhaeAN59_RS14495	PF00375	Sodium:dicarboxylate symporter family
AhaeAN59_RS14510	PF03884	DNA gyrase inhibitor YacG
AhaeAN59_RS14515	PF01244	Membrane dipeptidase (Peptidase family M19)
AhaeAN59_RS14520	PF04055	Radical SAM superfamily
AhaeAN59_RS14520	PF13186	Iron-sulfur cluster-binding domain
AhaeAN59_RS14525	PF05402	Coenzyme PQQ synthesis protein D (PqqD)
AhaeAN59_RS14530	PF03070	TENA/THI-4/PQQC family
AhaeAN59_RS14535	PF12706	Beta-lactamase superfamily domain
AhaeAN59_RS14540	PF08042	PqqA family
AhaeAN59_RS14550	PF00753	Metallo-beta-lactamase superfamily
AhaeAN59_RS14555	PF00762	Ferrochelatase
AhaeAN59_RS14565	PF01177	Asp/Glu/Hydantoin racemase
AhaeAN59_RS14580	PF01206	Sulfurtransferase TusA
AhaeAN59_RS14585	PF00571	CBS domain
AhaeAN59_RS14585	PF03471	Transporter associated domain
AhaeAN59_RS14590	PF00795	Carbon-nitrogen hydrolase
AhaeAN59_RS14600	PF08334	Type II secretion system (T2SS), protein G
AhaeAN59_RS14600	PF07963	Prokaryotic N-terminal methylation motif
AhaeAN59_RS14605	PF00482	Type II secretion system (T2SS), protein F
AhaeAN59_RS14610	PF17764	3′ DNA-binding domain (3′BD)
AhaeAN59_RS14610	PF00271	Helicase conserved C-terminal domain
AhaeAN59_RS14610	PF00270	DEAD/DEAH box helicase
AhaeAN59_RS14610	PF18074	Primosomal protein N C-terminal domain
AhaeAN59_RS14610	PF18319	PriA DNA helicase Cys-rich region (CRR) domain
AhaeAN59_RS14615	PF00999	Sodium/hydrogen exchanger family
AhaeAN59_RS14615	PF02254	TrkA-N domain
AhaeAN59_RS14620	PF01430	Hsp33 protein
AhaeAN59_RS14630	PF00226	DnaJ domain
AhaeAN59_RS14630	PF01556	DnaJ C terminal domain
AhaeAN59_RS14640	PF01544	CorA-like Mg2+ transporter protein
AhaeAN59_RS14645	PF03725	3' exoribonuclease family, domain 2
AhaeAN59_RS14645	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
AhaeAN59_RS14645	PF00013	KH domain
AhaeAN59_RS14645	PF01138	3' exoribonuclease family, domain 1
AhaeAN59_RS14645	PF00575	S1 RNA binding domain
AhaeAN59_RS14650	PF00312	Ribosomal protein S15
AhaeAN59_RS14660	PF13538	UvrD-like helicase C-terminal domain
AhaeAN59_RS14665	PF12705	PD-(D/E)XK nuclease superfamily
AhaeAN59_RS14665	PF13361	UvrD-like helicase C-terminal domain
AhaeAN59_RS14665	PF00580	UvrD/REP helicase N-terminal domain
AhaeAN59_RS14670	PF17946	RecC C-terminal domain
AhaeAN59_RS14680	PF07690	Major Facilitator Superfamily
AhaeAN59_RS14685	PF03976	Polyphosphate kinase 2 (PPK2)
AhaeAN59_RS14695	PF01209	ubiE/COQ5 methyltransferase family
AhaeAN59_RS14705	PF03109	ABC1 family
AhaeAN59_RS14715	PF00528	Binding-protein-dependent transport system inner membrane component
AhaeAN59_RS14720	PF00005	ABC transporter
AhaeAN59_RS14725	PF01494	FAD binding domain
AhaeAN59_RS14730	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AhaeAN59_RS14735	PF01502	Phosphoribosyl-AMP cyclohydrolase
AhaeAN59_RS14750	PF13244	Domain of unknown function (DUF4040)
AhaeAN59_RS14750	PF04039	Domain related to MnhB subunit of Na+/H+ antiporter
AhaeAN59_RS14750	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
AhaeAN59_RS14750	PF00361	Proton-conducting membrane transporter
AhaeAN59_RS14755	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
AhaeAN59_RS14760	PF00361	Proton-conducting membrane transporter
AhaeAN59_RS14765	PF01899	Na+/H+ ion antiporter subunit
AhaeAN59_RS14770	PF04066	Multiple resistance and pH regulation protein F (MrpF / PhaF)
AhaeAN59_RS14795	PF02033	Ribosome-binding factor A
AhaeAN59_RS14800	PF00009	Elongation factor Tu GTP binding domain
AhaeAN59_RS14800	PF11987	Translation-initiation factor 2
AhaeAN59_RS14800	PF04760	Translation initiation factor IF-2, N-terminal region
AhaeAN59_RS14800	PF08364	Bacterial translation initiation factor IF-2 associated region
AhaeAN59_RS14805	PF08529	NusA N-terminal domain
AhaeAN59_RS14805	PF00575	S1 RNA binding domain
AhaeAN59_RS14805	PF13184	NusA-like KH domain
AhaeAN59_RS14810	PF02576	RimP N-terminal domain
AhaeAN59_RS14810	PF17384	RimP C-terminal SH3 domain
AhaeAN59_RS14830	PF03840	Preprotein translocase SecG subunit
AhaeAN59_RS14835	PF00121	Triosephosphate isomerase
AhaeAN59_RS14840	PF00437	Type II/IV secretion system protein
AhaeAN59_RS14840	PF05157	Type II secretion system (T2SS), protein E, N-terminal domain
AhaeAN59_RS14860	PF01478	Type IV leader peptidase family
AhaeAN59_RS14860	PF06750	Bacterial Peptidase A24 N-terminal domain
AhaeAN59_RS14865	PF01121	Dephospho-CoA kinase
AhaeAN59_RS14875	PF00588	SpoU rRNA Methylase family
AhaeAN59_RS14875	PF08032	RNA 2'-O ribose methyltransferase substrate binding
AhaeAN59_RS14880	PF06865	Pyrimidine/purine nucleoside phosphorylase
AhaeAN59_RS14885	PF02463	RecF/RecN/SMC N terminal domain
AhaeAN59_RS14890	PF02622	Uncharacterized ACR, COG1678
AhaeAN59_RS14895	PF03652	Holliday junction resolvase
AhaeAN59_RS14900	PF13533	Biotin-lipoyl like
AhaeAN59_RS14920	PF01066	CDP-alcohol phosphatidyltransferase
AhaeAN59_RS14930	PF01541	GIY-YIG catalytic domain
AhaeAN59_RS14930	PF02151	UvrB/uvrC motif
AhaeAN59_RS14930	PF08459	UvrC Helix-hairpin-helix N-terminal
AhaeAN59_RS14945	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
AhaeAN59_RS14945	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
AhaeAN59_RS14945	PF00378	Enoyl-CoA hydratase/isomerase
AhaeAN59_RS14950	PF02803	Thiolase, C-terminal domain
AhaeAN59_RS14950	PF00108	Thiolase, N-terminal domain
AhaeAN59_RS14975	PF00005	ABC transporter
AhaeAN59_RS14975	PF00664	ABC transporter transmembrane region
AhaeAN59_RS14985	PF01323	DSBA-like thioredoxin domain
AhaeAN59_RS15000	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AhaeAN59_RS15000	PF00183	Hsp90 protein
AhaeAN59_RS15010	PF13726	Na+-H+ antiporter family
AhaeAN59_RS15010	PF03553	Na+/H+ antiporter family
AhaeAN59_RS15035	PF04998	RNA polymerase Rpb1, domain 5
AhaeAN59_RS15035	PF05000	RNA polymerase Rpb1, domain 4
AhaeAN59_RS15035	PF04983	RNA polymerase Rpb1, domain 3
AhaeAN59_RS15035	PF00623	RNA polymerase Rpb1, domain 2
AhaeAN59_RS15035	PF04997	RNA polymerase Rpb1, domain 1
AhaeAN59_RS15040	PF04565	RNA polymerase Rpb2, domain 3
AhaeAN59_RS15040	PF04560	RNA polymerase Rpb2, domain 7
AhaeAN59_RS15040	PF04563	RNA polymerase beta subunit
AhaeAN59_RS15040	PF00562	RNA polymerase Rpb2, domain 6
AhaeAN59_RS15040	PF10385	RNA polymerase beta subunit external 1 domain
AhaeAN59_RS15040	PF04561	RNA polymerase Rpb2, domain 2
AhaeAN59_RS15045	PF16320	Ribosomal protein L7/L12 dimerisation domain
AhaeAN59_RS15045	PF00542	Ribosomal protein L7/L12 C-terminal domain
AhaeAN59_RS15050	PF00466	Ribosomal protein L10
AhaeAN59_RS15055	PF00687	Ribosomal protein L1p/L10e family
AhaeAN59_RS15060	PF00298	Ribosomal protein L11, RNA binding domain
AhaeAN59_RS15060	PF03946	Ribosomal protein L11, N-terminal domain
AhaeAN59_RS15065	PF02357	Transcription termination factor nusG
AhaeAN59_RS15065	PF00467	KOW motif
AhaeAN59_RS15070	PF00584	SecE/Sec61-gamma subunits of protein translocation complex
AhaeAN59_RS15080	PF00009	Elongation factor Tu GTP binding domain
AhaeAN59_RS15080	PF03144	Elongation factor Tu domain 2
AhaeAN59_RS15080	PF03143	Elongation factor Tu C-terminal domain
AhaeAN59_RS15105	PF04715	Anthranilate synthase component I, N terminal region
AhaeAN59_RS15105	PF00425	chorismate binding enzyme
AhaeAN59_RS15110	PF13419	Haloacid dehalogenase-like hydrolase
AhaeAN59_RS15115	PF12401	Protein of unknown function (DUF2662) 
AhaeAN59_RS15115	PF00498	FHA domain
AhaeAN59_RS15120	PF00263	Bacterial type II and III secretion system protein
AhaeAN59_RS15120	PF03958	Bacterial type II/III secretion system short domain
AhaeAN59_RS15135	PF00816	H-NS histone family
AhaeAN59_RS15145	PF13737	Transposase DDE domain
AhaeAN59_RS15170	PF01379	Porphobilinogen deaminase, dipyromethane cofactor binding domain
AhaeAN59_RS15170	PF03900	Porphobilinogen deaminase, C-terminal domain
AhaeAN59_RS15175	PF00072	Response regulator receiver domain
AhaeAN59_RS15175	PF04397	LytTr DNA-binding domain
AhaeAN59_RS15180	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AhaeAN59_RS15180	PF06580	Histidine kinase
AhaeAN59_RS15180	PF07694	5TMR of 5TMR-LYT
AhaeAN59_RS15185	PF00206	Lyase
AhaeAN59_RS15185	PF14698	Argininosuccinate lyase C-terminal
AhaeAN59_RS15190	PF04362	Bacterial Fe(2+) trafficking
AhaeAN59_RS15200	PF01895	PhoU domain
AhaeAN59_RS15210	PF01964	Radical SAM ThiC family
AhaeAN59_RS15210	PF13667	ThiC-associated domain 
AhaeAN59_RS15215	PF00293	NUDIX domain
AhaeAN59_RS15220	PF00149	Calcineurin-like phosphoesterase
AhaeAN59_RS15225	PF01258	Prokaryotic dksA/traR C4-type zinc finger
AhaeAN59_RS15230	PF00749	tRNA synthetases class I (E and Q), catalytic domain
AhaeAN59_RS15235	PF01098	Cell cycle protein
AhaeAN59_RS15240	PF08245	Mur ligase middle domain
AhaeAN59_RS15240	PF02875	Mur ligase family, glutamate ligase domain
AhaeAN59_RS15250	PF07664	Ferrous iron transport protein B C terminus
AhaeAN59_RS15250	PF02421	Ferrous iron transport protein B
AhaeAN59_RS15250	PF07670	Nucleoside recognition
AhaeAN59_RS15260	PF02899	Phage integrase, N-terminal SAM-like domain
AhaeAN59_RS15260	PF00589	Phage integrase family
AhaeAN59_RS15265	PF13098	Thioredoxin-like domain
AhaeAN59_RS15265	PF10411	Disulfide bond isomerase protein N-terminus
AhaeAN59_RS15270	PF03447	Homoserine dehydrogenase, NAD binding domain
AhaeAN59_RS15270	PF00742	Homoserine dehydrogenase
AhaeAN59_RS15270	PF01842	ACT domain
AhaeAN59_RS15275	PF00291	Pyridoxal-phosphate dependent enzyme
AhaeAN59_RS15280	PF00768	D-alanyl-D-alanine carboxypeptidase
AhaeAN59_RS15285	PF00196	Bacterial regulatory proteins, luxR family
AhaeAN59_RS15285	PF00072	Response regulator receiver domain
AhaeAN59_RS15290	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AhaeAN59_RS15290	PF00512	His Kinase A (phospho-acceptor) domain
AhaeAN59_RS15295	PF00158	Sigma-54 interaction domain
AhaeAN59_RS15295	PF02954	Bacterial regulatory protein, Fis family
AhaeAN59_RS15295	PF00072	Response regulator receiver domain
AhaeAN59_RS15300	PF13180	PDZ domain
AhaeAN59_RS15300	PF03572	Peptidase family S41
AhaeAN59_RS15305	PF01676	Metalloenzyme superfamily
AhaeAN59_RS15305	PF06415	BPG-independent PGAM N-terminus (iPGM_N)
AhaeAN59_RS15310	PF03739	Lipopolysaccharide export system permease LptF/LptG
AhaeAN59_RS15315	PF03739	Lipopolysaccharide export system permease LptF/LptG
AhaeAN59_RS15320	PF02789	Cytosol aminopeptidase family, N-terminal domain
AhaeAN59_RS15320	PF00883	Cytosol aminopeptidase family, catalytic domain
AhaeAN59_RS15335	PF00677	Lumazine binding domain
AhaeAN59_RS15340	PF00230	Major intrinsic protein
AhaeAN59_RS15350	PF01872	RibD C-terminal domain
AhaeAN59_RS15350	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
AhaeAN59_RS15355	PF03477	ATP cone domain
AhaeAN59_RS15360	PF00909	Ammonium Transporter Family
AhaeAN59_RS15365	PF00543	Nitrogen regulatory protein P-II
AhaeAN59_RS15375	PF01078	Magnesium chelatase, subunit ChlI
AhaeAN59_RS15375	PF13335	Magnesium chelatase, subunit ChlI C-terminal
AhaeAN59_RS15450	PF16916	Dimerisation domain of Zinc Transporter
AhaeAN59_RS15450	PF01545	Cation efflux family
AhaeAN59_RS15465	PF02321	Outer membrane efflux protein
AhaeAN59_RS15470	PF00873	AcrB/AcrD/AcrF family
AhaeAN59_RS15475	PF00529	HlyD membrane-fusion protein of T1SS
AhaeAN59_RS15475	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
AhaeAN59_RS15480	PF01545	Cation efflux family
AhaeAN59_RS15490	PF13737	Transposase DDE domain
AhaeAN59_RS15495	PF01022	Bacterial regulatory protein, arsR family
AhaeAN59_RS15500	PF00403	Heavy-metal-associated domain
AhaeAN59_RS15505	PF00376	MerR family regulatory protein
AhaeAN59_RS15505	PF09278	MerR, DNA binding
AhaeAN59_RS15515	PF13005	zinc-finger binding domain of transposase IS66 
AhaeAN59_RS15515	PF03050	Transposase IS66 family 
AhaeAN59_RS15515	PF13817	IS66 C-terminal element
AhaeAN59_RS15515	PF13007	Transposase C of IS166 homeodomain
AhaeAN59_RS15535	PF13737	Transposase DDE domain
AhaeAN59_RS15540	PF13737	Transposase DDE domain
AhaeAN59_RS15570	PF07690	Major Facilitator Superfamily
AhaeAN59_RS15590	PF00873	AcrB/AcrD/AcrF family
AhaeAN59_RS15595	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
AhaeAN59_RS15595	PF00529	HlyD membrane-fusion protein of T1SS
AhaeAN59_RS15610	PF00111	2Fe-2S iron-sulfur cluster binding domain
AhaeAN59_RS15660	PF13335	Magnesium chelatase, subunit ChlI C-terminal
AhaeAN59_RS15660	PF01078	Magnesium chelatase, subunit ChlI
AhaeAN59_RS15680	PF00719	Inorganic pyrophosphatase
AhaeAN59_RS15695	PF13193	AMP-binding enzyme C-terminal domain
AhaeAN59_RS15695	PF00501	AMP-binding enzyme
AhaeAN59_RS15700	PF03989	DNA gyrase C-terminal domain, beta-propeller
AhaeAN59_RS15700	PF00521	DNA gyrase/topoisomerase IV, subunit A
AhaeAN59_RS15715	PF03458	UPF0126 domain
AhaeAN59_RS15720	PF02810	SEC-C motif
AhaeAN59_RS15725	PF03741	Integral membrane protein TerC family
AhaeAN59_RS15725	PF03471	Transporter associated domain
AhaeAN59_RS15730	PF03641	Possible lysine decarboxylase
AhaeAN59_RS15740	PF07690	Major Facilitator Superfamily
AhaeAN59_RS15750	PF11799	impB/mucB/samB family C-terminal domain
AhaeAN59_RS15750	PF11798	IMS family HHH motif
AhaeAN59_RS15750	PF00817	impB/mucB/samB family
AhaeAN59_RS15765	PF11842	Domain of unknown function (DUF3362)
AhaeAN59_RS15765	PF04055	Radical SAM superfamily
AhaeAN59_RS15765	PF08497	Radical SAM N-terminal
AhaeAN59_RS15780	PF13737	Transposase DDE domain
AhaeAN59_RS15790	PF07690	Major Facilitator Superfamily
AhaeAN59_RS15800	PF00291	Pyridoxal-phosphate dependent enzyme
AhaeAN59_RS15810	PF02690	Na+/Pi-cotransporter
AhaeAN59_RS15840	PF02028	BCCT, betaine/carnitine/choline family transporter
AhaeAN59_RS15855	PF00474	Sodium:solute symporter family
AhaeAN59_RS15860	PF04341	Protein of unknown function, DUF485
AhaeAN59_RS15865	PF00512	His Kinase A (phospho-acceptor) domain
AhaeAN59_RS15865	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AhaeAN59_RS15885	PF01327	Polypeptide deformylase
AhaeAN59_RS15890	PF01476	LysM domain
AhaeAN59_RS15895	PF17782	DprA winged helix domain
AhaeAN59_RS15895	PF02481	DNA recombination-mediator protein A
AhaeAN59_RS15900	PF01300	Telomere recombination
AhaeAN59_RS15910	PF00440	Bacterial regulatory proteins, tetR family
AhaeAN59_RS15915	PF07690	Major Facilitator Superfamily
AhaeAN59_RS15925	PF00255	Glutathione peroxidase
AhaeAN59_RS15945	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
AhaeAN59_RS15950	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
AhaeAN59_RS15950	PF02874	ATP synthase alpha/beta family, beta-barrel domain
AhaeAN59_RS15955	PF00231	ATP synthase
AhaeAN59_RS15960	PF02874	ATP synthase alpha/beta family, beta-barrel domain
AhaeAN59_RS15960	PF00306	ATP synthase alpha/beta chain, C terminal domain
AhaeAN59_RS15960	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
AhaeAN59_RS15965	PF00213	ATP synthase delta (OSCP) subunit
AhaeAN59_RS15970	PF00430	ATP synthase B/B' CF(0)
AhaeAN59_RS15975	PF00137	ATP synthase subunit C
AhaeAN59_RS15980	PF00119	ATP synthase A chain
AhaeAN59_RS16000	PF00005	ABC transporter
AhaeAN59_RS16005	PF00950	ABC 3 transport family
AhaeAN59_RS16010	PF01810	LysE type translocator
AhaeAN59_RS16015	PF04261	Dyp-type peroxidase family 
AhaeAN59_RS16020	PF03485	Arginyl tRNA synthetase N terminal domain
AhaeAN59_RS16020	PF05746	DALR anticodon binding domain
AhaeAN59_RS16020	PF00750	tRNA synthetases class I (R)
AhaeAN59_RS16040	PF02678	Pirin
AhaeAN59_RS16040	PF05726	Pirin C-terminal cupin domain
AhaeAN59_RS16050	PF01613	Flavin reductase like domain
AhaeAN59_RS16055	PF01717	Cobalamin-independent synthase, Catalytic domain
AhaeAN59_RS16055	PF08267	Cobalamin-independent synthase, N-terminal domain
AhaeAN59_RS16075	PF00145	C-5 cytosine-specific DNA methylase
AhaeAN59_RS16080	PF02540	NAD synthase
AhaeAN59_RS16080	PF00117	Glutamine amidotransferase class-I
AhaeAN59_RS16080	PF00958	GMP synthase C terminal domain
AhaeAN59_RS16085	PF04286	Protein of unknown function (DUF445)
AhaeAN59_RS16095	PF07681	DoxX
AhaeAN59_RS16100	PF09335	SNARE associated Golgi protein
AhaeAN59_RS16115	PF13614	AAA domain
AhaeAN59_RS16125	PF01722	BolA-like protein
AhaeAN59_RS16155	PF07120	Protein of unknown function (DUF1376)
AhaeAN59_RS16160	PF01695	IstB-like ATP binding protein
AhaeAN59_RS16165	PF13737	Transposase DDE domain
AhaeAN59_RS16200	PF13737	Transposase DDE domain
AhaeAN59_RS16210	PF00145	C-5 cytosine-specific DNA methylase
AhaeAN59_RS16275	PF13657	HipA N-terminal domain
AhaeAN59_RS16275	PF07804	HipA-like C-terminal domain
AhaeAN59_RS16305	PF13737	Transposase DDE domain
AhaeAN59_RS16335	PF14864	Alkyl sulfatase C-terminal
AhaeAN59_RS16335	PF14863	Alkyl sulfatase dimerisation
AhaeAN59_RS16335	PF00753	Metallo-beta-lactamase superfamily
AhaeAN59_RS16365	PF04411	PD-(D/E)XK nuclease superfamily
AhaeAN59_RS16375	PF13737	Transposase DDE domain
AhaeAN59_RS16400	PF05726	Pirin C-terminal cupin domain
AhaeAN59_RS16400	PF02678	Pirin
AhaeAN59_RS16410	PF01475	Ferric uptake regulator family
AhaeAN59_RS16415	PF03551	Transcriptional regulator PadR-like family
AhaeAN59_RS16450	PF07690	Major Facilitator Superfamily
AhaeAN59_RS16450	PF00083	Sugar (and other) transporter
AhaeAN59_RS16455	PF00378	Enoyl-CoA hydratase/isomerase
AhaeAN59_RS16460	PF00378	Enoyl-CoA hydratase/isomerase
AhaeAN59_RS16465	PF02770	Acyl-CoA dehydrogenase, middle domain
AhaeAN59_RS16465	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AhaeAN59_RS16465	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AhaeAN59_RS16470	PF00501	AMP-binding enzyme
AhaeAN59_RS16470	PF13193	AMP-binding enzyme C-terminal domain
AhaeAN59_RS16475	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
AhaeAN59_RS16475	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
AhaeAN59_RS16480	PF00171	Aldehyde dehydrogenase family
AhaeAN59_RS16490	PF00324	Amino acid permease
AhaeAN59_RS16495	PF01042	Endoribonuclease L-PSP
AhaeAN59_RS16500	PF01168	Alanine racemase, N-terminal domain
AhaeAN59_RS16500	PF00842	Alanine racemase, C-terminal domain
AhaeAN59_RS16505	PF01266	FAD dependent oxidoreductase
AhaeAN59_RS16510	PF01037	Lrp/AsnC ligand binding domain
AhaeAN59_RS16515	PF07715	TonB-dependent Receptor Plug Domain
AhaeAN59_RS16515	PF00593	TonB dependent receptor
AhaeAN59_RS16525	PF00583	Acetyltransferase (GNAT) family
AhaeAN59_RS16530	PF00849	RNA pseudouridylate synthase
AhaeAN59_RS16535	PF01113	Dihydrodipicolinate reductase, N-terminus
AhaeAN59_RS16535	PF05173	Dihydrodipicolinate reductase, C-terminus
AhaeAN59_RS16550	PF13737	Transposase DDE domain
AhaeAN59_RS16570	PF00330	Aconitase family (aconitate hydratase)
AhaeAN59_RS16570	PF00694	Aconitase C-terminal domain
AhaeAN59_RS16575	PF00285	Citrate synthase, C-terminal domain
AhaeAN59_RS16585	PF00392	Bacterial regulatory proteins, gntR family
AhaeAN59_RS16585	PF07729	FCD domain
AhaeAN59_RS16590	PF00155	Aminotransferase class I and II
AhaeAN59_RS16595	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
AhaeAN59_RS16595	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
AhaeAN59_RS16595	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
AhaeAN59_RS16595	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
AhaeAN59_RS16600	PF16363	GDP-mannose 4,6 dehydratase
AhaeAN59_RS16605	PF00342	Phosphoglucose isomerase
AhaeAN59_RS16610	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
AhaeAN59_RS16610	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
AhaeAN59_RS16610	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
AhaeAN59_RS16615	PF00483	Nucleotidyl transferase
AhaeAN59_RS16620	PF02719	Polysaccharide biosynthesis protein
AhaeAN59_RS16625	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
AhaeAN59_RS16630	PF17836	PglD N-terminal domain
AhaeAN59_RS16630	PF14602	Hexapeptide repeat of succinyl-transferase
AhaeAN59_RS16630	PF00132	Bacterial transferase hexapeptide (six repeats)
AhaeAN59_RS16635	PF02397	Bacterial sugar transferase
AhaeAN59_RS16640	PF01975	Survival protein SurE
AhaeAN59_RS16680	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
AhaeAN59_RS16680	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
AhaeAN59_RS16680	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
AhaeAN59_RS16685	PF02350	UDP-N-acetylglucosamine 2-epimerase
AhaeAN59_RS16690	PF02563	Polysaccharide biosynthesis/export protein
AhaeAN59_RS16690	PF10531	SLBB domain
AhaeAN59_RS16690	PF18412	Outer-membrane lipoprotein Wza C-terminal domain
AhaeAN59_RS16695	PF01451	Low molecular weight phosphotyrosine protein phosphatase
AhaeAN59_RS16700	PF13614	AAA domain
AhaeAN59_RS16700	PF02706	Chain length determinant protein
AhaeAN59_RS16700	PF13807	G-rich domain on putative tyrosine kinase
AhaeAN59_RS16705	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AhaeAN59_RS16705	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
AhaeAN59_RS16710	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
AhaeAN59_RS16710	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AhaeAN59_RS16715	PF03023	Lipid II flippase MurJ
AhaeAN59_RS16720	PF01510	N-acetylmuramoyl-L-alanine amidase
AhaeAN59_RS16725	PF02749	Quinolinate phosphoribosyl transferase, N-terminal domain
AhaeAN59_RS16725	PF01729	Quinolinate phosphoribosyl transferase, C-terminal domain
AhaeAN59_RS16735	PF01138	3' exoribonuclease family, domain 1
AhaeAN59_RS16735	PF03725	3' exoribonuclease family, domain 2
AhaeAN59_RS16740	PF00487	Fatty acid desaturase
AhaeAN59_RS16745	PF00175	Oxidoreductase NAD-binding domain 
AhaeAN59_RS16750	PF00440	Bacterial regulatory proteins, tetR family
AhaeAN59_RS16755	PF08360	QacR-like protein, C-terminal region
AhaeAN59_RS16755	PF00440	Bacterial regulatory proteins, tetR family
AhaeAN59_RS16760	PF01323	DSBA-like thioredoxin domain
AhaeAN59_RS16770	PF13419	Haloacid dehalogenase-like hydrolase
AhaeAN59_RS16775	PF00106	short chain dehydrogenase
AhaeAN59_RS16785	PF00583	Acetyltransferase (GNAT) family
AhaeAN59_RS16785	PF00696	Amino acid kinase family
AhaeAN59_RS16790	PF09084	NMT1/THI5 like
AhaeAN59_RS16795	PF09084	NMT1/THI5 like
AhaeAN59_RS16800	PF00296	Luciferase-like monooxygenase
AhaeAN59_RS16805	PF00528	Binding-protein-dependent transport system inner membrane component
AhaeAN59_RS16810	PF00005	ABC transporter
AhaeAN59_RS16815	PF00440	Bacterial regulatory proteins, tetR family
AhaeAN59_RS16815	PF08362	YcdC-like protein, C-terminal region
AhaeAN59_RS16820	PF13817	IS66 C-terminal element
AhaeAN59_RS16820	PF13007	Transposase C of IS166 homeodomain
AhaeAN59_RS16820	PF13005	zinc-finger binding domain of transposase IS66 
AhaeAN59_RS16820	PF03050	Transposase IS66 family 
AhaeAN59_RS16860	PF06574	FAD synthetase
AhaeAN59_RS16860	PF01687	Riboflavin kinase
AhaeAN59_RS16865	PF08264	Anticodon-binding domain of tRNA
AhaeAN59_RS16865	PF00133	tRNA synthetases class I (I, L, M and V)
AhaeAN59_RS16865	PF06827	Zinc finger found in FPG and IleRS
AhaeAN59_RS16870	PF01252	Signal peptidase (SPase) II
AhaeAN59_RS16875	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AhaeAN59_RS16915	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
AhaeAN59_RS16920	PF07859	alpha/beta hydrolase fold
AhaeAN59_RS16940	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_RS16940	PF03466	LysR substrate binding domain
AhaeAN59_RS16945	PF01025	GrpE
AhaeAN59_RS16950	PF00012	Hsp70 protein
AhaeAN59_RS16955	PF12706	Beta-lactamase superfamily domain
AhaeAN59_RS16980	PF13406	Transglycosylase SLT domain
AhaeAN59_RS16985	PF17769	Phosphoribosylaminoimidazole carboxylase C-terminal domain
AhaeAN59_RS16985	PF02222	ATP-grasp domain
AhaeAN59_RS16990	PF00731	AIR carboxylase
AhaeAN59_RS17005	PF08245	Mur ligase middle domain
AhaeAN59_RS17005	PF02875	Mur ligase family, glutamate ligase domain
AhaeAN59_RS17005	PF01225	Mur ligase family, catalytic domain
AhaeAN59_RS17010	PF00106	short chain dehydrogenase
AhaeAN59_RS17025	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AhaeAN59_RS17025	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AhaeAN59_RS17025	PF02770	Acyl-CoA dehydrogenase, middle domain
AhaeAN59_RS17030	PF03466	LysR substrate binding domain
AhaeAN59_RS17030	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_RS17035	PF03741	Integral membrane protein TerC family
AhaeAN59_RS17045	PF01979	Amidohydrolase family
AhaeAN59_RS17050	PF00156	Phosphoribosyl transferase domain
AhaeAN59_RS17060	PF10411	Disulfide bond isomerase protein N-terminus
AhaeAN59_RS17060	PF13098	Thioredoxin-like domain
AhaeAN59_RS17065	PF12631	MnmE helical domain
AhaeAN59_RS17065	PF10396	GTP-binding protein TrmE N-terminus
AhaeAN59_RS17065	PF01926	50S ribosome-binding GTPase
AhaeAN59_RS17070	PF02096	60Kd inner membrane protein
AhaeAN59_RS17070	PF14849	YidC periplasmic domain
AhaeAN59_RS17075	PF01809	Putative membrane protein insertion efficiency factor
AhaeAN59_RS17080	PF00825	Ribonuclease P
AhaeAN59_RS17085	PF00468	Ribosomal protein L34
AhaeAN59_RS17120	PF02661	Fic/DOC family
AhaeAN59_RS17150	PF11798	IMS family HHH motif
AhaeAN59_RS17150	PF11799	impB/mucB/samB family C-terminal domain
AhaeAN59_RS17150	PF00817	impB/mucB/samB family
AhaeAN59_RS17150	PF13438	Domain of unknown function (DUF4113)
AhaeAN59_RS17155	PF01726	LexA DNA binding domain
AhaeAN59_RS17155	PF00717	Peptidase S24-like
AhaeAN59_RS17185	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
AhaeAN59_RS17185	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
AhaeAN59_RS17185	PF00378	Enoyl-CoA hydratase/isomerase
AhaeAN59_RS17190	PF00108	Thiolase, N-terminal domain
AhaeAN59_RS17190	PF02803	Thiolase, C-terminal domain
AhaeAN59_RS17215	PF02311	AraC-like ligand binding domain
AhaeAN59_RS17215	PF12833	Helix-turn-helix domain
AhaeAN59_RS17220	PF01625	Peptide methionine sulfoxide reductase
AhaeAN59_RS17225	PF00462	Glutaredoxin
AhaeAN59_RS17230	PF01641	SelR domain
AhaeAN59_RS17235	PF01625	Peptide methionine sulfoxide reductase
AhaeAN59_RS17240	PF00990	Diguanylate cyclase, GGDEF domain
AhaeAN59_RS17240	PF08448	PAS fold
AhaeAN59_RS17255	PF04233	Phage Mu protein F like protein
AhaeAN59_RS17260	PF00589	Phage integrase family
AhaeAN59_RS17260	PF13356	Arm DNA-binding domain
AhaeAN59_RS17285	PF13411	MerR HTH family regulatory protein
AhaeAN59_RS17295	PF01252	Signal peptidase (SPase) II
AhaeAN59_RS17300	PF13737	Transposase DDE domain
AhaeAN59_RS17320	PF13635	Domain of unknown function (DUF4143)
AhaeAN59_RS17320	PF13173	AAA domain
AhaeAN59_RS17400	PF00563	EAL domain
AhaeAN59_RS17400	PF11809	Domain of unknown function (DUF3330)
AhaeAN59_RS17410	PF05052	MerE protein
AhaeAN59_RS17415	PF13411	MerR HTH family regulatory protein
AhaeAN59_RS17420	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AhaeAN59_RS17420	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AhaeAN59_RS17420	PF00403	Heavy-metal-associated domain
AhaeAN59_RS17425	PF03203	MerC mercury resistance protein
AhaeAN59_RS17430	PF00403	Heavy-metal-associated domain
AhaeAN59_RS17435	PF02411	MerT mercuric transport protein
AhaeAN59_RS17440	PF00376	MerR family regulatory protein
AhaeAN59_RS17440	PF09278	MerR, DNA binding
AhaeAN59_RS17445	PF13610	DDE domain
AhaeAN59_RS17450	PF13610	DDE domain
AhaeAN59_RS17465	PF06100	MCRA family
AhaeAN59_RS17470	PF08240	Alcohol dehydrogenase GroES-like domain
AhaeAN59_RS17470	PF00107	Zinc-binding dehydrogenase
AhaeAN59_RS17490	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
AhaeAN59_RS17495	PF01425	Amidase
AhaeAN59_RS17510	PF03389	MobA/MobL family
AhaeAN59_RS17520	PF01051	Initiator Replication protein
