CS557_RS00135	PWY-6825	phosphatidylcholine biosynthesis V
CS557_RS00145	PWY-5101	L-isoleucine biosynthesis II
CS557_RS00145	PWY-5103	L-isoleucine biosynthesis III
CS557_RS00145	PWY-5104	L-isoleucine biosynthesis IV
CS557_RS00145	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CS557_RS00175	PWY-1622	formaldehyde assimilation I (serine pathway)
CS557_RS00175	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
CS557_RS00175	PWY-5913	TCA cycle VI (obligate autotrophs)
CS557_RS00175	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CS557_RS00175	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
CS557_RS00175	PWY-6549	L-glutamine biosynthesis III
CS557_RS00175	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
CS557_RS00175	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
CS557_RS00175	PWY-7124	ethylene biosynthesis V (engineered)
CS557_RS00205	PWY-2941	L-lysine biosynthesis II
CS557_RS00205	PWY-2942	L-lysine biosynthesis III
CS557_RS00205	PWY-5097	L-lysine biosynthesis VI
CS557_RS00305	PWY-6123	inosine-5'-phosphate biosynthesis I
CS557_RS00305	PWY-6124	inosine-5'-phosphate biosynthesis II
CS557_RS00305	PWY-7234	inosine-5'-phosphate biosynthesis III
CS557_RS00315	PWY-2941	L-lysine biosynthesis II
CS557_RS00315	PWY-2942	L-lysine biosynthesis III
CS557_RS00315	PWY-5097	L-lysine biosynthesis VI
CS557_RS00335	PWY-6749	CMP-legionaminate biosynthesis I
CS557_RS00340	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
CS557_RS00340	PWY-5667	CDP-diacylglycerol biosynthesis I
CS557_RS00340	PWY-6453	stigma estolide biosynthesis
CS557_RS00340	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
CS557_RS00340	PWY-7587	oleate biosynthesis III (cyanobacteria)
CS557_RS00345	PWY-5269	cardiolipin biosynthesis II
CS557_RS00345	PWY-5668	cardiolipin biosynthesis I
CS557_RS00345	PWY-7817	CS557_RS00345
CS557_RS00350	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
CS557_RS00350	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
CS557_RS00350	PWY-6896	thiamin salvage I
CS557_RS00350	PWY-6897	thiamin salvage II
CS557_RS00360	PWY-6167	flavin biosynthesis II (archaea)
CS557_RS00360	PWY-6168	flavin biosynthesis III (fungi)
CS557_RS00365	PWY-6167	flavin biosynthesis II (archaea)
CS557_RS00365	PWY-6168	flavin biosynthesis III (fungi)
CS557_RS00365	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CS557_RS00395	PWY-5381	pyridine nucleotide cycling (plants)
CS557_RS00405	PWY-5350	thiosulfate disproportionation III (rhodanese)
CS557_RS00410	PWY-5669	phosphatidylethanolamine biosynthesis I
CS557_RS00490	PWY-6840	homoglutathione biosynthesis
CS557_RS00490	PWY-7255	ergothioneine biosynthesis I (bacteria)
CS557_RS00645	PWY-5686	UMP biosynthesis
CS557_RS00645	PWY-7790	CS557_RS00645
CS557_RS00645	PWY-7791	CS557_RS00645
CS557_RS00685	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CS557_RS00685	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
CS557_RS00685	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CS557_RS00685	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CS557_RS00690	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CS557_RS00690	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CS557_RS00695	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CS557_RS00695	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CS557_RS00715	PWY-2201	folate transformations I
CS557_RS00715	PWY-5497	purine nucleobases degradation II (anaerobic)
CS557_RS00730	PWY-6891	thiazole biosynthesis II (Bacillus)
CS557_RS00730	PWY-6892	thiazole biosynthesis I (E. coli)
CS557_RS00730	PWY-7560	methylerythritol phosphate pathway II
CS557_RS00770	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
CS557_RS00770	PWY-6596	adenosine nucleotides degradation I
CS557_RS00770	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CS557_RS00775	PWY-6749	CMP-legionaminate biosynthesis I
CS557_RS00780	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
CS557_RS00780	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
CS557_RS00785	PWY-7805	CS557_RS00785
CS557_RS00785	PWY-7807	CS557_RS00785
CS557_RS00815	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
CS557_RS00820	PWY-2201	folate transformations I
CS557_RS00835	PWY-5132	humulone biosynthesis
CS557_RS00835	PWY-5133	cohumulone biosynthesis
CS557_RS00835	PWY-6672	<i>cis</i>-genanyl-CoA degradation
CS557_RS00835	PWY-7118	chitin degradation to ethanol
CS557_RS00835	PWY-7857	CS557_RS00835
CS557_RS00855	PWY-7723	CS557_RS00855
CS557_RS00895	PWY-6899	base-degraded thiamin salvage
CS557_RS00895	PWY-7356	thiamin salvage IV (yeast)
CS557_RS00960	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
CS557_RS01250	PWY-702	L-methionine biosynthesis II
CS557_RS01420	PWY-6825	phosphatidylcholine biosynthesis V
CS557_RS01490	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CS557_RS01505	PWY-2201	folate transformations I
CS557_RS01525	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CS557_RS01525	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CS557_RS01530	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CS557_RS01530	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CS557_RS01530	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CS557_RS01570	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CS557_RS01575	PWY-6164	3-dehydroquinate biosynthesis I
CS557_RS01665	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CS557_RS01670	PWY-7560	methylerythritol phosphate pathway II
CS557_RS01720	PWY-6829	tRNA methylation (yeast)
CS557_RS01720	PWY-7285	methylwyosine biosynthesis
CS557_RS01720	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
CS557_RS01820	PWY-6854	ethylene biosynthesis III (microbes)
CS557_RS01955	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CS557_RS01960	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
CS557_RS01965	PWY-6168	flavin biosynthesis III (fungi)
CS557_RS01965	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CS557_RS01970	PWY-6891	thiazole biosynthesis II (Bacillus)
CS557_RS01970	PWY-6892	thiazole biosynthesis I (E. coli)
CS557_RS01970	PWY-7560	methylerythritol phosphate pathway II
CS557_RS02055	PWY-5667	CDP-diacylglycerol biosynthesis I
CS557_RS02055	PWY-6453	stigma estolide biosynthesis
CS557_RS02055	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
CS557_RS02055	PWY-7587	oleate biosynthesis III (cyanobacteria)
CS557_RS02390	PWY-7731	CS557_RS02390
CS557_RS02445	PWY-5344	L-homocysteine biosynthesis
CS557_RS02450	PWY-6871	3-methylbutanol biosynthesis
CS557_RS02495	PWY-5392	reductive TCA cycle II
CS557_RS02495	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CS557_RS02495	PWY-5690	TCA cycle II (plants and fungi)
CS557_RS02495	PWY-5913	TCA cycle VI (obligate autotrophs)
CS557_RS02495	PWY-6728	methylaspartate cycle
CS557_RS02495	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CS557_RS02495	PWY-7254	TCA cycle VII (acetate-producers)
CS557_RS02495	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CS557_RS02510	PWY-1281	sulfoacetaldehyde degradation I
CS557_RS02510	PWY-5482	pyruvate fermentation to acetate II
CS557_RS02510	PWY-5485	pyruvate fermentation to acetate IV
CS557_RS02510	PWY-5497	purine nucleobases degradation II (anaerobic)
CS557_RS02510	PWY-6637	sulfolactate degradation II
CS557_RS02515	PWY-5482	pyruvate fermentation to acetate II
CS557_RS02515	PWY-5485	pyruvate fermentation to acetate IV
CS557_RS02515	PWY-5497	purine nucleobases degradation II (anaerobic)
CS557_RS02520	PWY-3341	L-proline biosynthesis III
CS557_RS02520	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
CS557_RS02535	PWY-6902	chitin degradation II
CS557_RS02535	PWY-7822	CS557_RS02535
CS557_RS02710	PWY-7851	CS557_RS02710
CS557_RS02760	PWY-5971	palmitate biosynthesis II (bacteria and plants)
CS557_RS02760	PWY-5973	<i>cis</i>-vaccenate biosynthesis
CS557_RS02760	PWY-5989	stearate biosynthesis II (bacteria and plants)
CS557_RS02760	PWY-6113	superpathway of mycolate biosynthesis
CS557_RS02760	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
CS557_RS02760	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CS557_RS02760	PWY-7663	gondoate biosynthesis (anaerobic)
CS557_RS02760	PWY-7664	oleate biosynthesis IV (anaerobic)
CS557_RS02760	PWY-7858	CS557_RS02760
CS557_RS02760	PWYG-321	mycolate biosynthesis
CS557_RS02810	PWY-5101	L-isoleucine biosynthesis II
CS557_RS02810	PWY-5103	L-isoleucine biosynthesis III
CS557_RS02810	PWY-5104	L-isoleucine biosynthesis IV
CS557_RS02810	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
CS557_RS02810	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
CS557_RS02810	PWY-6389	(<i>S</i>)-acetoin biosynthesis
CS557_RS02810	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CS557_RS02815	PWY-5101	L-isoleucine biosynthesis II
CS557_RS02815	PWY-5103	L-isoleucine biosynthesis III
CS557_RS02815	PWY-5104	L-isoleucine biosynthesis IV
CS557_RS02815	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
CS557_RS02815	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
CS557_RS02815	PWY-6389	(<i>S</i>)-acetoin biosynthesis
CS557_RS02815	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CS557_RS02820	PWY-5103	L-isoleucine biosynthesis III
CS557_RS02820	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CS557_RS02835	PWY-4202	arsenate detoxification I (glutaredoxin)
CS557_RS02835	PWY-4621	arsenate detoxification II (glutaredoxin)
CS557_RS02990	PWY-6936	seleno-amino acid biosynthesis
CS557_RS03030	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CS557_RS03030	PWY-6148	tetrahydromethanopterin biosynthesis
CS557_RS03030	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
CS557_RS03030	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CS557_RS03030	PWY-7852	CS557_RS03030
CS557_RS03030	PWY-7853	CS557_RS03030
CS557_RS03035	PWY-6654	phosphopantothenate biosynthesis III
CS557_RS03145	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CS557_RS03160	PWY-6679	jadomycin biosynthesis
CS557_RS03160	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CS557_RS03170	PWY-3341	L-proline biosynthesis III
CS557_RS03170	PWY-4981	L-proline biosynthesis II (from arginine)
CS557_RS03170	PWY-6344	L-ornithine degradation II (Stickland reaction)
CS557_RS03275	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CS557_RS03275	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CS557_RS03295	PWY-5958	acridone alkaloid biosynthesis
CS557_RS03295	PWY-6543	4-aminobenzoate biosynthesis
CS557_RS03295	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
CS557_RS03295	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
CS557_RS03345	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
CS557_RS03345	PWY-5368	dimorphecolate biosynthesis
CS557_RS03345	PWY-5995	linoleate biosynthesis I (plants)
CS557_RS03345	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
CS557_RS03345	PWY-6803	phosphatidylcholine acyl editing
CS557_RS03345	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
CS557_RS03345	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
CS557_RS03345	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
CS557_RS03345	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
CS557_RS03345	PWY-7470	phosphatidylcholine biosynthesis VII
CS557_RS03345	PWY-7618	ricinoleate biosynthesis
CS557_RS03350	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
CS557_RS03365	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
CS557_RS03375	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CS557_RS03375	PWY-5723	Rubisco shunt
CS557_RS03415	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CS557_RS03420	PWY-5316	nicotine biosynthesis
CS557_RS03420	PWY-7342	superpathway of nicotine biosynthesis
CS557_RS03465	PWY-5381	pyridine nucleotide cycling (plants)
CS557_RS03485	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
CS557_RS03485	PWY-7494	choline degradation IV
CS557_RS03490	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
CS557_RS03490	PWY-7494	choline degradation IV
CS557_RS03520	PWY-7254	TCA cycle VII (acetate-producers)
CS557_RS03525	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CS557_RS03525	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CS557_RS03525	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CS557_RS03525	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CS557_RS03525	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CS557_RS03525	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CS557_RS03525	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CS557_RS03525	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
CS557_RS03535	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CS557_RS03535	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CS557_RS03535	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CS557_RS03535	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CS557_RS03535	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CS557_RS03535	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CS557_RS03535	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CS557_RS03535	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
CS557_RS03625	PWY-7183	pyrimidine nucleobases salvage I
CS557_RS03765	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CS557_RS03815	PWY-3961	phosphopantothenate biosynthesis II
CS557_RS03880	PWY-2201	folate transformations I
CS557_RS03880	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CS557_RS03885	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
CS557_RS03995	PWY-4381	fatty acid biosynthesis initiation I
CS557_RS03995	PWY-6799	fatty acid biosynthesis (plant mitochondria)
CS557_RS03995	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CS557_RS04000	PWY-5367	petroselinate biosynthesis
CS557_RS04000	PWY-5515	L-arabinose degradation II
CS557_RS04000	PWY-5525	D-glucuronate degradation I
CS557_RS04000	PWY-5971	palmitate biosynthesis II (bacteria and plants)
CS557_RS04000	PWY-5973	<i>cis</i>-vaccenate biosynthesis
CS557_RS04000	PWY-5989	stearate biosynthesis II (bacteria and plants)
CS557_RS04000	PWY-5994	palmitate biosynthesis I (animals and fungi)
CS557_RS04000	PWY-6113	superpathway of mycolate biosynthesis
CS557_RS04000	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
CS557_RS04000	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CS557_RS04000	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CS557_RS04000	PWY-7663	gondoate biosynthesis (anaerobic)
CS557_RS04000	PWY-7664	oleate biosynthesis IV (anaerobic)
CS557_RS04000	PWY-7858	CS557_RS04000
CS557_RS04000	PWYG-321	mycolate biosynthesis
CS557_RS04025	PWY-6167	flavin biosynthesis II (archaea)
CS557_RS04025	PWY-6168	flavin biosynthesis III (fungi)
CS557_RS04045	PWY-5155	&beta;-alanine biosynthesis III
CS557_RS04050	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
CS557_RS04085	PWY-7560	methylerythritol phosphate pathway II
CS557_RS04100	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CS557_RS04135	PWY-7851	CS557_RS04135
CS557_RS04165	PWY-5381	pyridine nucleotide cycling (plants)
CS557_RS04165	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
CS557_RS04165	PWY-7761	CS557_RS04165
CS557_RS04230	PWY-7799	CS557_RS04230
CS557_RS04235	PWY-7801	CS557_RS04235
CS557_RS04305	PWY-6749	CMP-legionaminate biosynthesis I
CS557_RS04310	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CS557_RS04310	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CS557_RS04360	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CS557_RS04410	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CS557_RS04410	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
CS557_RS04705	PWY-2201	folate transformations I
CS557_RS04705	PWY-3841	folate transformations II
CS557_RS04740	PWY-2941	L-lysine biosynthesis II
CS557_RS04740	PWY-2942	L-lysine biosynthesis III
CS557_RS04740	PWY-5097	L-lysine biosynthesis VI
CS557_RS04745	PWY-2941	L-lysine biosynthesis II
CS557_RS04745	PWY-5097	L-lysine biosynthesis VI
CS557_RS04860	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CS557_RS04860	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
CS557_RS04865	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CS557_RS04865	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CS557_RS04865	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CS557_RS04915	PWY-5484	glycolysis II (from fructose 6-phosphate)
CS557_RS04985	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CS557_RS04985	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CS557_RS04985	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CS557_RS05055	PWY-6482	diphthamide biosynthesis (archaea)
CS557_RS05055	PWY-7546	diphthamide biosynthesis (eukaryotes)
CS557_RS05065	PWY-6703	preQ<sub>0</sub> biosynthesis
CS557_RS05070	PWY-6703	preQ<sub>0</sub> biosynthesis
CS557_RS05115	PWY-6543	4-aminobenzoate biosynthesis
CS557_RS05125	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CS557_RS05125	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CS557_RS05125	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CS557_RS05125	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
CS557_RS05125	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CS557_RS05125	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CS557_RS05130	PWY-5316	nicotine biosynthesis
CS557_RS05130	PWY-7342	superpathway of nicotine biosynthesis
CS557_RS05240	PWY-1042	glycolysis IV (plant cytosol)
CS557_RS05240	PWY-5484	glycolysis II (from fructose 6-phosphate)
CS557_RS05240	PWY-6901	superpathway of glucose and xylose degradation
CS557_RS05240	PWY-7003	glycerol degradation to butanol
CS557_RS05260	PWY-3341	L-proline biosynthesis III
CS557_RS05260	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
CS557_RS05315	PWY-5278	sulfite oxidation III
CS557_RS05315	PWY-5340	sulfate activation for sulfonation
CS557_RS05315	PWY-6683	sulfate reduction III (assimilatory)
CS557_RS05315	PWY-6932	selenate reduction
CS557_RS05320	PWY-5278	sulfite oxidation III
CS557_RS05320	PWY-5340	sulfate activation for sulfonation
CS557_RS05320	PWY-6683	sulfate reduction III (assimilatory)
CS557_RS05320	PWY-6932	selenate reduction
CS557_RS05345	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CS557_RS05370	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CS557_RS05370	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
CS557_RS05430	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CS557_RS05555	PWY-5747	2-methylcitrate cycle II
CS557_RS05565	PWY-5750	itaconate biosynthesis
CS557_RS05565	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CS557_RS05565	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
CS557_RS05620	PWY-5381	pyridine nucleotide cycling (plants)
CS557_RS05620	PWY-7761	CS557_RS05620
CS557_RS05640	PWY-5691	urate degradation to allantoin I
CS557_RS05640	PWY-7394	urate degradation to allantoin II
CS557_RS05640	PWY-7849	CS557_RS05640
CS557_RS05700	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
CS557_RS05720	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
CS557_RS05720	PWY-5368	dimorphecolate biosynthesis
CS557_RS05720	PWY-5995	linoleate biosynthesis I (plants)
CS557_RS05720	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
CS557_RS05720	PWY-6803	phosphatidylcholine acyl editing
CS557_RS05720	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
CS557_RS05720	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
CS557_RS05720	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
CS557_RS05720	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
CS557_RS05720	PWY-7470	phosphatidylcholine biosynthesis VII
CS557_RS05720	PWY-7618	ricinoleate biosynthesis
CS557_RS05875	PWY-6123	inosine-5'-phosphate biosynthesis I
CS557_RS05875	PWY-6124	inosine-5'-phosphate biosynthesis II
CS557_RS05875	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CS557_RS05875	PWY-7234	inosine-5'-phosphate biosynthesis III
CS557_RS05905	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CS557_RS05905	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CS557_RS05920	PWY-5381	pyridine nucleotide cycling (plants)
CS557_RS05920	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
CS557_RS05920	PWY-6596	adenosine nucleotides degradation I
CS557_RS05920	PWY-6606	guanosine nucleotides degradation II
CS557_RS05920	PWY-6607	guanosine nucleotides degradation I
CS557_RS05920	PWY-6608	guanosine nucleotides degradation III
CS557_RS05920	PWY-7185	UTP and CTP dephosphorylation I
CS557_RS05920	PWY-7821	CS557_RS05920
CS557_RS05945	PWY-5386	methylglyoxal degradation I
CS557_RS06060	PWY-4983	L-citrulline-nitric oxide cycle
CS557_RS06060	PWY-4984	urea cycle
CS557_RS06060	PWY-5	canavanine biosynthesis
CS557_RS06060	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CS557_RS06060	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CS557_RS06090	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
CS557_RS06095	PWY-1361	benzoyl-CoA degradation I (aerobic)
CS557_RS06095	PWY-2361	3-oxoadipate degradation
CS557_RS06095	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
CS557_RS06115	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
CS557_RS06120	PWY-1042	glycolysis IV (plant cytosol)
CS557_RS06120	PWY-1622	formaldehyde assimilation I (serine pathway)
CS557_RS06120	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CS557_RS06120	PWY-5484	glycolysis II (from fructose 6-phosphate)
CS557_RS06120	PWY-5723	Rubisco shunt
CS557_RS06120	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CS557_RS06120	PWY-6886	1-butanol autotrophic biosynthesis
CS557_RS06120	PWY-6901	superpathway of glucose and xylose degradation
CS557_RS06120	PWY-7003	glycerol degradation to butanol
CS557_RS06120	PWY-7124	ethylene biosynthesis V (engineered)
CS557_RS06120	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CS557_RS06130	PWY-2421	indole-3-acetate degradation VIII (bacterial)
CS557_RS06130	PWY-5648	2-nitrobenzoate degradation II
CS557_RS06130	PWY-6079	anthranilate degradation I (aerobic)
CS557_RS06135	PWY-2421	indole-3-acetate degradation VIII (bacterial)
CS557_RS06135	PWY-5648	2-nitrobenzoate degradation II
CS557_RS06135	PWY-6079	anthranilate degradation I (aerobic)
CS557_RS06165	PWY-5686	UMP biosynthesis
CS557_RS06165	PWY-7790	CS557_RS06165
CS557_RS06165	PWY-7791	CS557_RS06165
CS557_RS06180	PWY-5663	tetrahydrobiopterin biosynthesis I
CS557_RS06180	PWY-5664	tetrahydrobiopterin biosynthesis II
CS557_RS06180	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CS557_RS06180	PWY-6703	preQ<sub>0</sub> biosynthesis
CS557_RS06180	PWY-6983	tetrahydrobiopterin biosynthesis III
CS557_RS06180	PWY-7442	drosopterin and aurodrosopterin biosynthesis
CS557_RS06180	PWY-7852	CS557_RS06180
CS557_RS06185	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CS557_RS06280	PWY-5913	TCA cycle VI (obligate autotrophs)
CS557_RS06280	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
CS557_RS06280	PWY-6638	sulfolactate degradation III
CS557_RS06280	PWY-6642	(<i>R</i>)-cysteate degradation
CS557_RS06280	PWY-6643	coenzyme M biosynthesis II
CS557_RS06280	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
CS557_RS06280	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
CS557_RS06280	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CS557_RS06335	PWY-1361	benzoyl-CoA degradation I (aerobic)
CS557_RS06335	PWY-2361	3-oxoadipate degradation
CS557_RS06335	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
CS557_RS06340	PWY-6123	inosine-5'-phosphate biosynthesis I
CS557_RS06340	PWY-6124	inosine-5'-phosphate biosynthesis II
CS557_RS06340	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CS557_RS06340	PWY-7234	inosine-5'-phosphate biosynthesis III
CS557_RS06345	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
CS557_RS06370	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CS557_RS06370	PWY-6416	quinate degradation II
CS557_RS06370	PWY-6707	gallate biosynthesis
CS557_RS06390	PWY-5691	urate degradation to allantoin I
CS557_RS06390	PWY-7394	urate degradation to allantoin II
CS557_RS06390	PWY-7849	CS557_RS06390
CS557_RS06395	PWY-5691	urate degradation to allantoin I
CS557_RS06395	PWY-7394	urate degradation to allantoin II
CS557_RS06395	PWY-7849	CS557_RS06395
CS557_RS06420	PWY-5697	allantoin degradation to ureidoglycolate I (urea producing)
CS557_RS06425	PWY-5694	allantoin degradation to glyoxylate I
CS557_RS06425	PWY-5705	allantoin degradation to glyoxylate III
CS557_RS06460	PWY-5028	L-histidine degradation II
CS557_RS06460	PWY-5030	L-histidine degradation III
CS557_RS06465	PWY-5028	L-histidine degradation II
CS557_RS06465	PWY-5030	L-histidine degradation III
CS557_RS06475	PWY-5028	L-histidine degradation II
CS557_RS06475	PWY-5030	L-histidine degradation III
CS557_RS06615	PWY-6825	phosphatidylcholine biosynthesis V
CS557_RS06625	PWY-5686	UMP biosynthesis
CS557_RS06625	PWY-7790	CS557_RS06625
CS557_RS06625	PWY-7791	CS557_RS06625
CS557_RS06710	PWY-4381	fatty acid biosynthesis initiation I
CS557_RS06720	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
CS557_RS06720	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
CS557_RS06765	PWY-6700	queuosine biosynthesis
CS557_RS06840	PWY-6857	retinol biosynthesis
CS557_RS06850	PWY-1622	formaldehyde assimilation I (serine pathway)
CS557_RS06850	PWY-181	photorespiration
CS557_RS06850	PWY-2161	folate polyglutamylation
CS557_RS06850	PWY-2201	folate transformations I
CS557_RS06850	PWY-3661	glycine betaine degradation I
CS557_RS06850	PWY-3661-1	glycine betaine degradation II (mammalian)
CS557_RS06850	PWY-3841	folate transformations II
CS557_RS06850	PWY-5497	purine nucleobases degradation II (anaerobic)
CS557_RS06900	PWY-6854	ethylene biosynthesis III (microbes)
CS557_RS06940	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CS557_RS06940	PWY-6148	tetrahydromethanopterin biosynthesis
CS557_RS06940	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
CS557_RS06940	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CS557_RS06945	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CS557_RS06945	PWY-6148	tetrahydromethanopterin biosynthesis
CS557_RS06945	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
CS557_RS06945	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CS557_RS06945	PWY-7852	CS557_RS06945
CS557_RS06945	PWY-7853	CS557_RS06945
CS557_RS06990	PWY-5747	2-methylcitrate cycle II
CS557_RS07090	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
CS557_RS07090	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
CS557_RS07090	PWY-6897	thiamin salvage II
CS557_RS07090	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
CS557_RS07090	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
CS557_RS07090	PWY-7356	thiamin salvage IV (yeast)
CS557_RS07090	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
CS557_RS07100	PWY-1001	cellulose biosynthesis
CS557_RS07100	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CS557_RS07100	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
CS557_RS07100	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CS557_RS07100	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CS557_RS07110	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
CS557_RS07110	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
CS557_RS07110	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
CS557_RS07175	PWY-3461	L-tyrosine biosynthesis II
CS557_RS07175	PWY-3462	L-phenylalanine biosynthesis II
CS557_RS07175	PWY-6120	L-tyrosine biosynthesis III
CS557_RS07175	PWY-6627	salinosporamide A biosynthesis
CS557_RS07175	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
CS557_RS07175	PWY-7626	bacilysin biosynthesis
CS557_RS07180	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CS557_RS07180	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
CS557_RS07265	PWY-6891	thiazole biosynthesis II (Bacillus)
CS557_RS07265	PWY-6892	thiazole biosynthesis I (E. coli)
CS557_RS07300	PWY-1042	glycolysis IV (plant cytosol)
CS557_RS07300	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CS557_RS07300	PWY-5484	glycolysis II (from fructose 6-phosphate)
CS557_RS07300	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CS557_RS07300	PWY-7385	1,3-propanediol biosynthesis (engineered)
CS557_RS07360	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CS557_RS07430	PWY-7205	CMP phosphorylation
CS557_RS07455	PWY-5686	UMP biosynthesis
CS557_RS07455	PWY-7790	CS557_RS07455
CS557_RS07455	PWY-7791	CS557_RS07455
CS557_RS07480	PWY-6728	methylaspartate cycle
CS557_RS07480	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CS557_RS07480	PWY-7118	chitin degradation to ethanol
CS557_RS07480	PWY-7294	xylose degradation IV
CS557_RS07480	PWY-7295	L-arabinose degradation IV
CS557_RS07480	PWY-7854	CS557_RS07480
CS557_RS07515	PWY-7799	CS557_RS07515
CS557_RS07515	PWY-7800	CS557_RS07515
CS557_RS07595	PWY-7545	pyruvate to cytochrome <i>bd</i> terminal oxidase electron transfer
CS557_RS07635	PWY-6803	phosphatidylcholine acyl editing
CS557_RS07635	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
CS557_RS07635	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
CS557_RS07635	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
CS557_RS07635	PWY-7783	CS557_RS07635
CS557_RS07660	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CS557_RS07660	PWY-5723	Rubisco shunt
CS557_RS07675	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CS557_RS07675	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CS557_RS07705	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CS557_RS07705	PWY-6164	3-dehydroquinate biosynthesis I
CS557_RS07705	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
CS557_RS07750	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
CS557_RS07750	PWY-7177	UTP and CTP dephosphorylation II
CS557_RS07750	PWY-7185	UTP and CTP dephosphorylation I
CS557_RS07755	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CS557_RS07755	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
CS557_RS07760	PWY-1042	glycolysis IV (plant cytosol)
CS557_RS07760	PWY-1622	formaldehyde assimilation I (serine pathway)
CS557_RS07760	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CS557_RS07760	PWY-5484	glycolysis II (from fructose 6-phosphate)
CS557_RS07760	PWY-5723	Rubisco shunt
CS557_RS07760	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CS557_RS07760	PWY-6886	1-butanol autotrophic biosynthesis
CS557_RS07760	PWY-6901	superpathway of glucose and xylose degradation
CS557_RS07760	PWY-7003	glycerol degradation to butanol
CS557_RS07760	PWY-7124	ethylene biosynthesis V (engineered)
CS557_RS07760	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CS557_RS07770	PWY-7560	methylerythritol phosphate pathway II
CS557_RS07810	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
CS557_RS07810	PWY-3162	L-tryptophan degradation V (side chain pathway)
CS557_RS07810	PWY-5057	L-valine degradation II
CS557_RS07810	PWY-5076	L-leucine degradation III
CS557_RS07810	PWY-5078	L-isoleucine degradation II
CS557_RS07810	PWY-5079	L-phenylalanine degradation III
CS557_RS07810	PWY-5082	L-methionine degradation III
CS557_RS07810	PWY-5480	pyruvate fermentation to ethanol I
CS557_RS07810	PWY-5486	pyruvate fermentation to ethanol II
CS557_RS07810	PWY-5751	phenylethanol biosynthesis
CS557_RS07810	PWY-6313	serotonin degradation
CS557_RS07810	PWY-6333	acetaldehyde biosynthesis I
CS557_RS07810	PWY-6342	noradrenaline and adrenaline degradation
CS557_RS07810	PWY-6454	vancomycin resistance I
CS557_RS07810	PWY-6587	pyruvate fermentation to ethanol III
CS557_RS07810	PWY-6802	salidroside biosynthesis
CS557_RS07810	PWY-6871	3-methylbutanol biosynthesis
CS557_RS07810	PWY-6901	superpathway of glucose and xylose degradation
CS557_RS07810	PWY-7013	L-1,2-propanediol degradation
CS557_RS07810	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CS557_RS07810	PWY-7118	chitin degradation to ethanol
CS557_RS07810	PWY-7396	butanol and isobutanol biosynthesis (engineered)
CS557_RS07810	PWY-7798	CS557_RS07810
CS557_RS07815	PWY-5169	cyanurate degradation
CS557_RS07815	PWY-5703	urea degradation I
CS557_RS07815	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
CS557_RS07820	PWY-5169	cyanurate degradation
CS557_RS07820	PWY-5703	urea degradation I
CS557_RS07850	PWY-6654	phosphopantothenate biosynthesis III
CS557_RS07850	PWY-7862	CS557_RS07850
CS557_RS07885	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
CS557_RS07890	PWY-1361	benzoyl-CoA degradation I (aerobic)
CS557_RS07890	PWY-2361	3-oxoadipate degradation
CS557_RS07890	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
CS557_RS07935	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
CS557_RS07980	PWY-5169	cyanurate degradation
CS557_RS07980	PWY-5703	urea degradation I
CS557_RS08045	PWY-6679	jadomycin biosynthesis
CS557_RS08045	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CS557_RS08115	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
CS557_RS08115	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
CS557_RS08115	PWY-6936	seleno-amino acid biosynthesis
CS557_RS08115	PWY-702	L-methionine biosynthesis II
CS557_RS08170	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
CS557_RS08200	PWY-723	alkylnitronates degradation
CS557_RS08320	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CS557_RS08415	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
CS557_RS08415	PWY-622	starch biosynthesis
CS557_RS08440	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CS557_RS08440	PWY-6164	3-dehydroquinate biosynthesis I
CS557_RS08440	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
CS557_RS08460	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
CS557_RS08460	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
CS557_RS08460	PWY-6269	adenosylcobalamin salvage from cobinamide II
CS557_RS08470	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
CS557_RS08470	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
CS557_RS08470	PWY-6269	adenosylcobalamin salvage from cobinamide II
CS557_RS08475	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
CS557_RS08475	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
CS557_RS08475	PWY-6269	adenosylcobalamin salvage from cobinamide II
CS557_RS08555	PWY-4081	glutathione redox reactions I
CS557_RS08575	PWY-5971	palmitate biosynthesis II (bacteria and plants)
CS557_RS08575	PWY-5973	<i>cis</i>-vaccenate biosynthesis
CS557_RS08575	PWY-5989	stearate biosynthesis II (bacteria and plants)
CS557_RS08575	PWY-5994	palmitate biosynthesis I (animals and fungi)
CS557_RS08575	PWY-6113	superpathway of mycolate biosynthesis
CS557_RS08575	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
CS557_RS08575	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CS557_RS08575	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CS557_RS08575	PWY-7663	gondoate biosynthesis (anaerobic)
CS557_RS08575	PWY-7664	oleate biosynthesis IV (anaerobic)
CS557_RS08575	PWY-7858	CS557_RS08575
CS557_RS08575	PWYG-321	mycolate biosynthesis
CS557_RS08600	PWY-7294	xylose degradation IV
CS557_RS08600	PWY-7295	L-arabinose degradation IV
CS557_RS08600	PWY-7560	methylerythritol phosphate pathway II
CS557_RS08605	PWY-5667	CDP-diacylglycerol biosynthesis I
CS557_RS08605	PWY-5981	CDP-diacylglycerol biosynthesis III
CS557_RS08605	PWY-7817	CS557_RS08605
CS557_RS08650	PWY-4981	L-proline biosynthesis II (from arginine)
CS557_RS08650	PWY-4984	urea cycle
CS557_RS08650	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CS557_RS08660	PWY-7560	methylerythritol phosphate pathway II
CS557_RS08680	PWY-5392	reductive TCA cycle II
CS557_RS08680	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CS557_RS08680	PWY-5690	TCA cycle II (plants and fungi)
CS557_RS08680	PWY-5913	TCA cycle VI (obligate autotrophs)
CS557_RS08680	PWY-6728	methylaspartate cycle
CS557_RS08680	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CS557_RS08680	PWY-7254	TCA cycle VII (acetate-producers)
CS557_RS08680	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CS557_RS08725	PWY-6823	molybdenum cofactor biosynthesis
CS557_RS08735	PWY-6823	molybdenum cofactor biosynthesis
CS557_RS08775	PWY-6683	sulfate reduction III (assimilatory)
CS557_RS08795	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CS557_RS08795	PWY-6416	quinate degradation II
CS557_RS08795	PWY-6707	gallate biosynthesis
CS557_RS08815	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
CS557_RS08885	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CS557_RS08885	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CS557_RS09005	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
CS557_RS09005	PWY-6853	ethylene biosynthesis II (microbes)
CS557_RS09005	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
CS557_RS09060	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CS557_RS09060	PWY-5723	Rubisco shunt
CS557_RS09060	PWY-6891	thiazole biosynthesis II (Bacillus)
CS557_RS09060	PWY-6892	thiazole biosynthesis I (E. coli)
CS557_RS09060	PWY-6901	superpathway of glucose and xylose degradation
CS557_RS09060	PWY-7560	methylerythritol phosphate pathway II
CS557_RS09065	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
CS557_RS09065	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
CS557_RS09120	PWY-6938	NADH repair
CS557_RS09125	PWY-6700	queuosine biosynthesis
CS557_RS09130	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
CS557_RS09355	PWY-6004	glycine betaine biosynthesis V (from glycine)
CS557_RS09360	PWY-6936	seleno-amino acid biosynthesis
CS557_RS09360	PWY-7274	D-cycloserine biosynthesis
CS557_RS09410	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
CS557_RS09420	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CS557_RS09420	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CS557_RS09420	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CS557_RS09420	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
CS557_RS09430	PWY-5686	UMP biosynthesis
CS557_RS09450	PWY-5667	CDP-diacylglycerol biosynthesis I
CS557_RS09450	PWY-5981	CDP-diacylglycerol biosynthesis III
CS557_RS09470	PWY-1042	glycolysis IV (plant cytosol)
CS557_RS09470	PWY-5484	glycolysis II (from fructose 6-phosphate)
CS557_RS09470	PWY-6886	1-butanol autotrophic biosynthesis
CS557_RS09470	PWY-6901	superpathway of glucose and xylose degradation
CS557_RS09470	PWY-7003	glycerol degradation to butanol
CS557_RS09625	PWY-6823	molybdenum cofactor biosynthesis
CS557_RS09625	PWY-6891	thiazole biosynthesis II (Bacillus)
CS557_RS09625	PWY-6892	thiazole biosynthesis I (E. coli)
CS557_RS09625	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
CS557_RS09680	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CS557_RS09680	PWY-5723	Rubisco shunt
CS557_RS09740	PWY-6897	thiamin salvage II
CS557_RS09740	PWY-7356	thiamin salvage IV (yeast)
CS557_RS09740	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
CS557_RS09785	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CS557_RS09815	PWY-2781	<i>cis</i>-zeatin biosynthesis
CS557_RS09875	PWY-5484	glycolysis II (from fructose 6-phosphate)
CS557_RS09890	PWY-3781	aerobic respiration I (cytochrome c)
CS557_RS09890	PWY-4521	arsenite oxidation I (respiratory)
CS557_RS09890	PWY-6692	Fe(II) oxidation
CS557_RS09890	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CS557_RS09890	PWY-7544	pyruvate to cytochrome <i>bo</i> oxidase electron transfer
CS557_RS09940	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CS557_RS09970	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CS557_RS09995	PWY-2941	L-lysine biosynthesis II
CS557_RS09995	PWY-2942	L-lysine biosynthesis III
CS557_RS09995	PWY-5097	L-lysine biosynthesis VI
CS557_RS09995	PWY-6559	spermidine biosynthesis II
CS557_RS09995	PWY-6562	norspermidine biosynthesis
CS557_RS09995	PWY-7153	grixazone biosynthesis
CS557_RS10025	PWY-6610	adenine and adenosine salvage IV
CS557_RS10090	PWY-6123	inosine-5'-phosphate biosynthesis I
CS557_RS10090	PWY-6124	inosine-5'-phosphate biosynthesis II
CS557_RS10090	PWY-7234	inosine-5'-phosphate biosynthesis III
CS557_RS10095	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CS557_RS10095	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CS557_RS10095	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CS557_RS10125	PWY-5386	methylglyoxal degradation I
CS557_RS10135	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
CS557_RS10140	PWY-2201	folate transformations I
CS557_RS10140	PWY-3841	folate transformations II
CS557_RS10145	PWY-2201	folate transformations I
CS557_RS10155	PWY-1281	sulfoacetaldehyde degradation I
CS557_RS10155	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
CS557_RS10155	PWY-5482	pyruvate fermentation to acetate II
CS557_RS10155	PWY-5485	pyruvate fermentation to acetate IV
CS557_RS10155	PWY-5497	purine nucleobases degradation II (anaerobic)
CS557_RS10155	PWY-6637	sulfolactate degradation II
CS557_RS10155	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
CS557_RS10175	PWY-7799	CS557_RS10175
CS557_RS10175	PWY-7800	CS557_RS10175
CS557_RS10205	PWY-6854	ethylene biosynthesis III (microbes)
CS557_RS10235	PWY-6857	retinol biosynthesis
CS557_RS10245	PWY-5755	4-hydroxybenzoate biosynthesis II (microbes)
CS557_RS10245	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
CS557_RS10245	PWY-6148	tetrahydromethanopterin biosynthesis
CS557_RS10245	PWY-7742	CS557_RS10245
CS557_RS10245	PWY-7745	CS557_RS10245
CS557_RS10250	PWY-381	nitrate reduction II (assimilatory)
CS557_RS10250	PWY-5675	nitrate reduction V (assimilatory)
CS557_RS10250	PWY-6549	L-glutamine biosynthesis III
CS557_RS10250	PWY-6963	ammonia assimilation cycle I
CS557_RS10250	PWY-6964	ammonia assimilation cycle II
CS557_RS10255	PWY-5958	acridone alkaloid biosynthesis
CS557_RS10255	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
CS557_RS10255	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
CS557_RS10290	PWY-5663	tetrahydrobiopterin biosynthesis I
CS557_RS10290	PWY-5664	tetrahydrobiopterin biosynthesis II
CS557_RS10290	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CS557_RS10290	PWY-6703	preQ<sub>0</sub> biosynthesis
CS557_RS10290	PWY-6983	tetrahydrobiopterin biosynthesis III
CS557_RS10290	PWY-7442	drosopterin and aurodrosopterin biosynthesis
CS557_RS10290	PWY-7852	CS557_RS10290
CS557_RS10295	PWY-5692	allantoin degradation to glyoxylate II
CS557_RS10295	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
CS557_RS10315	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
CS557_RS10315	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
CS557_RS10315	PWY-7766	CS557_RS10315
CS557_RS10330	PWY-5686	UMP biosynthesis
CS557_RS10330	PWY-7790	CS557_RS10330
CS557_RS10330	PWY-7791	CS557_RS10330
CS557_RS10390	PWY-5381	pyridine nucleotide cycling (plants)
CS557_RS10390	PWY-7761	CS557_RS10390
CS557_RS10415	PWY-2201	folate transformations I
CS557_RS10520	PWY-6825	phosphatidylcholine biosynthesis V
CS557_RS10555	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CS557_RS10635	PWY-6409	pyoverdine I biosynthesis
CS557_RS10635	PWY-6562	norspermidine biosynthesis
CS557_RS10635	PWY-761	rhizobactin 1021 biosynthesis
CS557_RS10635	PWY-7855	CS557_RS10635
CS557_RS10690	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CS557_RS10695	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
CS557_RS10695	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
CS557_RS10695	PWY-6897	thiamin salvage II
CS557_RS10695	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
CS557_RS10695	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
CS557_RS10695	PWY-7356	thiamin salvage IV (yeast)
CS557_RS10695	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
CS557_RS10735	PWY-5913	TCA cycle VI (obligate autotrophs)
CS557_RS10735	PWY-6549	L-glutamine biosynthesis III
CS557_RS10735	PWY-6728	methylaspartate cycle
CS557_RS10735	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CS557_RS10735	PWY-7124	ethylene biosynthesis V (engineered)
CS557_RS10735	PWY-7254	TCA cycle VII (acetate-producers)
CS557_RS10735	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
CS557_RS10750	PWY-5913	TCA cycle VI (obligate autotrophs)
CS557_RS10750	PWY-6549	L-glutamine biosynthesis III
CS557_RS10750	PWY-6728	methylaspartate cycle
CS557_RS10750	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CS557_RS10750	PWY-7124	ethylene biosynthesis V (engineered)
CS557_RS10750	PWY-7254	TCA cycle VII (acetate-producers)
CS557_RS10750	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
CS557_RS10760	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CS557_RS10760	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CS557_RS10835	PWY-723	alkylnitronates degradation
CS557_RS10870	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
CS557_RS10870	PWY-5743	3-hydroxypropanoate cycle
CS557_RS10870	PWY-5744	glyoxylate assimilation
CS557_RS10870	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CS557_RS10870	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CS557_RS10870	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
CS557_RS10870	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
CS557_RS10915	PWY-181	photorespiration
CS557_RS10920	PWY-7039	phosphatidate metabolism, as a signaling molecule
CS557_RS10920	PWY-7817	CS557_RS10920
CS557_RS10955	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CS557_RS10960	PWY-4261	glycerol degradation I
CS557_RS10960	PWY-6118	glycerol-3-phosphate shuttle
CS557_RS10960	PWY-6952	glycerophosphodiester degradation
CS557_RS10970	PWY-4261	glycerol degradation I
CS557_RS10990	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
CS557_RS10990	PWY-2201	folate transformations I
CS557_RS10990	PWY-3841	folate transformations II
CS557_RS10990	PWY-5030	L-histidine degradation III
CS557_RS10990	PWY-5497	purine nucleobases degradation II (anaerobic)
CS557_RS10990	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
CS557_RS11065	PWY-5392	reductive TCA cycle II
CS557_RS11065	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CS557_RS11065	PWY-5690	TCA cycle II (plants and fungi)
CS557_RS11065	PWY-5913	TCA cycle VI (obligate autotrophs)
CS557_RS11065	PWY-6728	methylaspartate cycle
CS557_RS11065	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CS557_RS11065	PWY-7254	TCA cycle VII (acetate-producers)
CS557_RS11065	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CS557_RS11165	PWY-6614	tetrahydrofolate biosynthesis
CS557_RS11195	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CS557_RS11195	PWY-5686	UMP biosynthesis
CS557_RS11195	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CS557_RS11195	PWY-7790	CS557_RS11195
CS557_RS11195	PWY-7791	CS557_RS11195
CS557_RS11200	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CS557_RS11200	PWY-5686	UMP biosynthesis
CS557_RS11200	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CS557_RS11200	PWY-7790	CS557_RS11200
CS557_RS11200	PWY-7791	CS557_RS11200
CS557_RS11305	PWY-5392	reductive TCA cycle II
CS557_RS11305	PWY-5537	pyruvate fermentation to acetate V
CS557_RS11305	PWY-5538	pyruvate fermentation to acetate VI
CS557_RS11305	PWY-5690	TCA cycle II (plants and fungi)
CS557_RS11305	PWY-5913	TCA cycle VI (obligate autotrophs)
CS557_RS11305	PWY-6728	methylaspartate cycle
CS557_RS11305	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CS557_RS11305	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CS557_RS11310	PWY-5392	reductive TCA cycle II
CS557_RS11310	PWY-5537	pyruvate fermentation to acetate V
CS557_RS11310	PWY-5538	pyruvate fermentation to acetate VI
CS557_RS11310	PWY-5690	TCA cycle II (plants and fungi)
CS557_RS11310	PWY-5913	TCA cycle VI (obligate autotrophs)
CS557_RS11310	PWY-6728	methylaspartate cycle
CS557_RS11310	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CS557_RS11310	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CS557_RS11315	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
CS557_RS11315	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
CS557_RS11320	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
CS557_RS11325	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
CS557_RS11335	PWY-3781	aerobic respiration I (cytochrome c)
CS557_RS11335	PWY-4302	aerobic respiration III (alternative oxidase pathway)
CS557_RS11335	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CS557_RS11335	PWY-5690	TCA cycle II (plants and fungi)
CS557_RS11335	PWY-6728	methylaspartate cycle
CS557_RS11335	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CS557_RS11335	PWY-7254	TCA cycle VII (acetate-producers)
CS557_RS11335	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CS557_RS11340	PWY-3781	aerobic respiration I (cytochrome c)
CS557_RS11340	PWY-4302	aerobic respiration III (alternative oxidase pathway)
CS557_RS11340	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CS557_RS11340	PWY-5690	TCA cycle II (plants and fungi)
CS557_RS11340	PWY-6728	methylaspartate cycle
CS557_RS11340	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CS557_RS11340	PWY-7254	TCA cycle VII (acetate-producers)
CS557_RS11340	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CS557_RS11430	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
CS557_RS11430	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
CS557_RS11460	PWY-6004	glycine betaine biosynthesis V (from glycine)
CS557_RS11465	PWY-5194	siroheme biosynthesis
CS557_RS11465	PWY-5196	factor 430 biosynthesis
CS557_RS11465	PWY-5441	S-methyl-L-methionine cycle
CS557_RS11465	PWY-702	L-methionine biosynthesis II
CS557_RS11465	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
CS557_RS11470	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
CS557_RS11540	PWY-6482	diphthamide biosynthesis (archaea)
CS557_RS11540	PWY-7546	diphthamide biosynthesis (eukaryotes)
CS557_RS11665	PWY-381	nitrate reduction II (assimilatory)
CS557_RS11665	PWY-5675	nitrate reduction V (assimilatory)
CS557_RS11665	PWY-6549	L-glutamine biosynthesis III
CS557_RS11665	PWY-6963	ammonia assimilation cycle I
CS557_RS11665	PWY-6964	ammonia assimilation cycle II
CS557_RS11775	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
CS557_RS12060	PWY-6825	phosphatidylcholine biosynthesis V
CS557_RS12105	PWY-6683	sulfate reduction III (assimilatory)
CS557_RS12145	PWY-1361	benzoyl-CoA degradation I (aerobic)
CS557_RS12145	PWY-5109	2-methylbutanoate biosynthesis
CS557_RS12145	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
CS557_RS12145	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
CS557_RS12145	PWY-5177	glutaryl-CoA degradation
CS557_RS12145	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CS557_RS12145	PWY-6435	4-hydroxybenzoate biosynthesis V
CS557_RS12145	PWY-6583	pyruvate fermentation to butanol I
CS557_RS12145	PWY-6863	pyruvate fermentation to hexanol
CS557_RS12145	PWY-6883	pyruvate fermentation to butanol II
CS557_RS12145	PWY-6944	androstenedione degradation
CS557_RS12145	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
CS557_RS12145	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
CS557_RS12145	PWY-7007	methyl ketone biosynthesis
CS557_RS12145	PWY-7046	4-coumarate degradation (anaerobic)
CS557_RS12145	PWY-7094	fatty acid salvage
CS557_RS12145	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
CS557_RS12145	PWY-735	jasmonic acid biosynthesis
CS557_RS12145	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
CS557_RS12145	PWY-7606	docosahexaenoate biosynthesis III (mammals)
CS557_RS12145	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
CS557_RS12145	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
CS557_RS12145	PWY-7726	CS557_RS12145
CS557_RS12145	PWY-7778	CS557_RS12145
CS557_RS12145	PWY-7779	CS557_RS12145
CS557_RS12145	PWY-81	toluene degradation to benzoyl-CoA (anaerobic)
CS557_RS12225	PWY-2161	folate polyglutamylation
CS557_RS12230	PWY-6679	jadomycin biosynthesis
CS557_RS12230	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CS557_RS12285	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
CS557_RS12285	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
CS557_RS12285	PWY-6268	adenosylcobalamin salvage from cobalamin
CS557_RS12285	PWY-6269	adenosylcobalamin salvage from cobinamide II
CS557_RS12300	PWY-5987	sorgoleone biosynthesis
CS557_RS12300	PWY-5996	oleate biosynthesis II (animals and fungi)
CS557_RS12460	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
CS557_RS12460	PWY-7820	CS557_RS12460
CS557_RS12465	PWY-5057	L-valine degradation II
CS557_RS12465	PWY-5076	L-leucine degradation III
CS557_RS12465	PWY-5078	L-isoleucine degradation II
CS557_RS12465	PWY-5101	L-isoleucine biosynthesis II
CS557_RS12465	PWY-5103	L-isoleucine biosynthesis III
CS557_RS12465	PWY-5104	L-isoleucine biosynthesis IV
CS557_RS12465	PWY-5108	L-isoleucine biosynthesis V
CS557_RS12465	PWY-7767	CS557_RS12465
CS557_RS12735	PWY-6700	queuosine biosynthesis
CS557_RS12750	PWY-6700	queuosine biosynthesis
CS557_RS12770	PWY-6012	acyl carrier protein metabolism I
CS557_RS12770	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
CS557_RS12810	PWY-2201	folate transformations I
CS557_RS12815	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CS557_RS12815	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
CS557_RS12815	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CS557_RS12815	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CS557_RS12815	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
CS557_RS12815	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CS557_RS12815	PWY-7205	CMP phosphorylation
CS557_RS12815	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CS557_RS12815	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CS557_RS12815	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CS557_RS12815	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CS557_RS12815	PWY-7224	purine deoxyribonucleosides salvage
CS557_RS12815	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CS557_RS12815	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
CS557_RS12845	PWY-7294	xylose degradation IV
CS557_RS12845	PWY-7295	L-arabinose degradation IV
CS557_RS12935	PWY-6679	jadomycin biosynthesis
CS557_RS12935	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CS557_RS13015	PWY-5669	phosphatidylethanolamine biosynthesis I
CS557_RS13040	PWY-1622	formaldehyde assimilation I (serine pathway)
CS557_RS13040	PWY-5392	reductive TCA cycle II
CS557_RS13040	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CS557_RS13040	PWY-5690	TCA cycle II (plants and fungi)
CS557_RS13040	PWY-5913	TCA cycle VI (obligate autotrophs)
CS557_RS13040	PWY-6728	methylaspartate cycle
CS557_RS13040	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CS557_RS13040	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
CS557_RS13040	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CS557_RS13100	PWY-3841	folate transformations II
CS557_RS13100	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CS557_RS13100	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CS557_RS13100	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CS557_RS13100	PWY-7199	pyrimidine deoxyribonucleosides salvage
CS557_RS13100	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CS557_RS13105	PWY-3841	folate transformations II
CS557_RS13105	PWY-6614	tetrahydrofolate biosynthesis
CS557_RS13140	PWY-2201	folate transformations I
CS557_RS13140	PWY-5497	purine nucleobases degradation II (anaerobic)
CS557_RS13270	PWY-2941	L-lysine biosynthesis II
CS557_RS13270	PWY-2942	L-lysine biosynthesis III
CS557_RS13270	PWY-5097	L-lysine biosynthesis VI
CS557_RS13270	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CS557_RS13270	PWY-6559	spermidine biosynthesis II
CS557_RS13270	PWY-6562	norspermidine biosynthesis
CS557_RS13270	PWY-7153	grixazone biosynthesis
CS557_RS13270	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CS557_RS13315	PWY-7396	butanol and isobutanol biosynthesis (engineered)
CS557_RS13380	PWY-5506	methanol oxidation to formaldehyde IV
CS557_RS13505	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
CS557_RS13545	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CS557_RS13545	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CS557_RS13705	PWY-5839	menaquinol-7 biosynthesis
CS557_RS13705	PWY-5844	menaquinol-9 biosynthesis
CS557_RS13705	PWY-5849	menaquinol-6 biosynthesis
CS557_RS13705	PWY-5890	menaquinol-10 biosynthesis
CS557_RS13705	PWY-5891	menaquinol-11 biosynthesis
CS557_RS13705	PWY-5892	menaquinol-12 biosynthesis
CS557_RS13705	PWY-5895	menaquinol-13 biosynthesis
CS557_RS13820	PWY-1042	glycolysis IV (plant cytosol)
CS557_RS13820	PWY-5484	glycolysis II (from fructose 6-phosphate)
CS557_RS13820	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CS557_RS13820	PWY-7003	glycerol degradation to butanol
CS557_RS13840	PWY-7851	CS557_RS13840
CS557_RS13895	PWY-5269	cardiolipin biosynthesis II
CS557_RS13895	PWY-5668	cardiolipin biosynthesis I
CS557_RS13895	PWY-7817	CS557_RS13895
CS557_RS13935	PWY-1361	benzoyl-CoA degradation I (aerobic)
CS557_RS13935	PWY-5109	2-methylbutanoate biosynthesis
CS557_RS13935	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
CS557_RS13935	PWY-5137	fatty acid &beta;-oxidation III (unsaturated, odd number)
CS557_RS13935	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
CS557_RS13935	PWY-5177	glutaryl-CoA degradation
CS557_RS13935	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CS557_RS13935	PWY-6435	4-hydroxybenzoate biosynthesis V
CS557_RS13935	PWY-6583	pyruvate fermentation to butanol I
CS557_RS13935	PWY-6837	fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent)
CS557_RS13935	PWY-6863	pyruvate fermentation to hexanol
CS557_RS13935	PWY-6883	pyruvate fermentation to butanol II
CS557_RS13935	PWY-6944	androstenedione degradation
CS557_RS13935	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
CS557_RS13935	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
CS557_RS13935	PWY-7007	methyl ketone biosynthesis
CS557_RS13935	PWY-7046	4-coumarate degradation (anaerobic)
CS557_RS13935	PWY-7094	fatty acid salvage
CS557_RS13935	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
CS557_RS13935	PWY-7291	oleate &beta;-oxidation (isomerase-dependent, yeast)
CS557_RS13935	PWY-735	jasmonic acid biosynthesis
CS557_RS13935	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
CS557_RS13935	PWY-7606	docosahexaenoate biosynthesis III (mammals)
CS557_RS13935	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
CS557_RS13935	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
CS557_RS13935	PWY-7726	CS557_RS13935
CS557_RS13935	PWY-7778	CS557_RS13935
CS557_RS13935	PWY-7779	CS557_RS13935
CS557_RS13935	PWY-81	toluene degradation to benzoyl-CoA (anaerobic)
CS557_RS13940	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
CS557_RS13940	PWY-6435	4-hydroxybenzoate biosynthesis V
CS557_RS13940	PWY-6863	pyruvate fermentation to hexanol
CS557_RS13940	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
CS557_RS13940	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
CS557_RS13940	PWY-6948	sitosterol degradation to androstenedione
CS557_RS13940	PWY-7094	fatty acid salvage
CS557_RS13940	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
CS557_RS13940	PWY-7337	10-<i>cis</i>-heptadecenoyl-CoA degradation (yeast)
CS557_RS13940	PWY-7338	10-<i>trans</i>-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
CS557_RS13940	PWY-7339	10-<i>trans</i>-heptadecenoyl-CoA degradation (MFE-dependent, yeast)
CS557_RS13940	PWY-7340	9-<i>cis</i>, 11-<i>trans</i>-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
CS557_RS13940	PWY-735	jasmonic acid biosynthesis
CS557_RS13940	PWY-7606	docosahexaenoate biosynthesis III (mammals)
CS557_RS13940	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
CS557_RS13940	PWY-7726	CS557_RS13940
CS557_RS14095	PWY-5958	acridone alkaloid biosynthesis
CS557_RS14095	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
CS557_RS14095	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
CS557_RS14100	PWY-181	photorespiration
CS557_RS14145	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CS557_RS14145	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
CS557_RS14150	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CS557_RS14150	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
CS557_RS14165	PWY-4983	L-citrulline-nitric oxide cycle
CS557_RS14165	PWY-4984	urea cycle
CS557_RS14165	PWY-5	canavanine biosynthesis
CS557_RS14165	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CS557_RS14165	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CS557_RS14185	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
CS557_RS14215	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CS557_RS14215	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CS557_RS14290	PWY-1042	glycolysis IV (plant cytosol)
CS557_RS14290	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CS557_RS14290	PWY-5484	glycolysis II (from fructose 6-phosphate)
CS557_RS14290	PWY-5723	Rubisco shunt
CS557_RS14290	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CS557_RS14290	PWY-6886	1-butanol autotrophic biosynthesis
CS557_RS14290	PWY-6901	superpathway of glucose and xylose degradation
CS557_RS14290	PWY-7003	glycerol degradation to butanol
CS557_RS14290	PWY-7124	ethylene biosynthesis V (engineered)
CS557_RS14290	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CS557_RS14320	PWY-6167	flavin biosynthesis II (archaea)
CS557_RS14320	PWY-6168	flavin biosynthesis III (fungi)
CS557_RS14320	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CS557_RS14335	PWY-5525	D-glucuronate degradation I
CS557_RS14380	PWY-7805	CS557_RS14380
CS557_RS14380	PWY-7807	CS557_RS14380
CS557_RS14535	PWY-6936	seleno-amino acid biosynthesis
CS557_RS14675	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CS557_RS14685	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CS557_RS14780	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CS557_RS14870	PWY-5642	2,4-dinitrotoluene degradation
CS557_RS14870	PWY-6373	acrylate degradation
CS557_RS14890	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CS557_RS14975	PWY-5747	2-methylcitrate cycle II
CS557_RS14985	PWY-5913	TCA cycle VI (obligate autotrophs)
CS557_RS14985	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
CS557_RS14985	PWY-6638	sulfolactate degradation III
CS557_RS14985	PWY-6642	(<i>R</i>)-cysteate degradation
CS557_RS14985	PWY-6643	coenzyme M biosynthesis II
CS557_RS14985	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
CS557_RS14985	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
CS557_RS14985	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CS557_RS14990	PWY-6749	CMP-legionaminate biosynthesis I
CS557_RS14995	PWY-3801	sucrose degradation II (sucrose synthase)
CS557_RS14995	PWY-5054	sorbitol biosynthesis I
CS557_RS14995	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
CS557_RS14995	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
CS557_RS14995	PWY-5659	GDP-mannose biosynthesis
CS557_RS14995	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CS557_RS14995	PWY-621	sucrose degradation III (sucrose invertase)
CS557_RS14995	PWY-622	starch biosynthesis
CS557_RS14995	PWY-6981	chitin biosynthesis
CS557_RS14995	PWY-6992	1,5-anhydrofructose degradation
CS557_RS14995	PWY-7238	sucrose biosynthesis II
CS557_RS14995	PWY-7347	sucrose biosynthesis III
CS557_RS14995	PWY-7385	1,3-propanediol biosynthesis (engineered)
CS557_RS15000	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
CS557_RS15000	PWY-7820	CS557_RS15000
CS557_RS15005	PWY-3801	sucrose degradation II (sucrose synthase)
CS557_RS15005	PWY-6527	stachyose degradation
CS557_RS15005	PWY-7238	sucrose biosynthesis II
CS557_RS15005	PWY-7343	UDP-glucose biosynthesis
CS557_RS15005	PWY-7817	CS557_RS15005
CS557_RS15020	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CS557_RS15020	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CS557_RS15020	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CS557_RS15050	PWY-3821	galactose degradation III
CS557_RS15050	PWY-6317	galactose degradation I (Leloir pathway)
CS557_RS15050	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
CS557_RS15050	PWY-6527	stachyose degradation
CS557_RS15050	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
CS557_RS15050	PWY-7344	UDP-D-galactose biosynthesis
CS557_RS15125	PWY-5316	nicotine biosynthesis
CS557_RS15125	PWY-5381	pyridine nucleotide cycling (plants)
CS557_RS15125	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
CS557_RS15125	PWY-7342	superpathway of nicotine biosynthesis
CS557_RS15135	PWY-7782	CS557_RS15135
CS557_RS15135	PWY-7783	CS557_RS15135
CS557_RS15170	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
CS557_RS15170	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
CS557_RS15170	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
CS557_RS15170	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
CS557_RS15170	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
CS557_RS15170	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
CS557_RS15170	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
CS557_RS15170	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
CS557_RS15170	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
CS557_RS15170	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
CS557_RS15190	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CS557_RS15235	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
CS557_RS15235	PWY-6167	flavin biosynthesis II (archaea)
CS557_RS15235	PWY-6168	flavin biosynthesis III (fungi)
CS557_RS15235	PWY-7863	CS557_RS15235
CS557_RS15360	PWY-6123	inosine-5'-phosphate biosynthesis I
CS557_RS15360	PWY-7234	inosine-5'-phosphate biosynthesis III
CS557_RS15430	PWY-5497	purine nucleobases degradation II (anaerobic)
CS557_RS15430	PWY-6606	guanosine nucleotides degradation II
CS557_RS15430	PWY-6608	guanosine nucleotides degradation III
CS557_RS15430	PWY-7442	drosopterin and aurodrosopterin biosynthesis
CS557_RS15435	PWY-6599	guanine and guanosine salvage II
CS557_RS15435	PWY-6609	adenine and adenosine salvage III
CS557_RS15435	PWY-6610	adenine and adenosine salvage IV
CS557_RS15435	PWY-6620	guanine and guanosine salvage
