locus-tag class description DKE48_RS00030 PF09335 SNARE associated Golgi protein DKE48_RS00055 PF01521 Iron-sulphur cluster biosynthesis DKE48_RS00060 PF00561 alpha/beta hydrolase fold DKE48_RS00110 PF00209 Sodium:neurotransmitter symporter family DKE48_RS00120 PF01189 16S rRNA methyltransferase RsmB/F DKE48_RS00120 PF01029 NusB family DKE48_RS00130 PF00920 Dehydratase family DKE48_RS00160 PF08361 MAATS-type transcriptional repressor, C-terminal region DKE48_RS00160 PF00440 Bacterial regulatory proteins, tetR family DKE48_RS00180 PF00226 DnaJ domain DKE48_RS00180 PF00684 DnaJ central domain DKE48_RS00180 PF01556 DnaJ C terminal domain DKE48_RS00205 PF00248 Aldo/keto reductase family DKE48_RS00270 PF03692 Putative zinc- or iron-chelating domain DKE48_RS00280 PF00004 ATPase family associated with various cellular activities (AAA) DKE48_RS00280 PF16193 AAA C-terminal domain DKE48_RS00280 PF12002 MgsA AAA+ ATPase C terminal DKE48_RS00310 PF00857 Isochorismatase family DKE48_RS00330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DKE48_RS00345 PF02798 Glutathione S-transferase, N-terminal domain DKE48_RS00345 PF14497 Glutathione S-transferase, C-terminal domain DKE48_RS00355 PF00324 Amino acid permease DKE48_RS00375 PF07702 UTRA domain DKE48_RS00375 PF00392 Bacterial regulatory proteins, gntR family DKE48_RS00380 PF05962 HutD DKE48_RS00395 PF00324 Amino acid permease DKE48_RS00400 PF01979 Amidohydrolase family DKE48_RS00405 PF00491 Arginase family DKE48_RS00425 PF01810 LysE type translocator DKE48_RS00480 PF13401 AAA domain DKE48_RS00480 PF11426 Tn7 transposition regulator TnsC DKE48_RS00500 PF12804 MobA-like NTP transferase domain DKE48_RS00500 PF14602 Hexapeptide repeat of succinyl-transferase DKE48_RS00500 PF00132 Bacterial transferase hexapeptide (six repeats) DKE48_RS00505 PF04608 Phosphatidylglycerophosphatase A DKE48_RS00510 PF02769 AIR synthase related protein, C-terminal domain DKE48_RS00510 PF00586 AIR synthase related protein, N-terminal domain DKE48_RS00515 PF01029 NusB family DKE48_RS00555 PF02580 D-Tyr-tRNA(Tyr) deacylase DKE48_RS00565 PF00581 Rhodanese-like domain DKE48_RS00590 PF00072 Response regulator receiver domain DKE48_RS00590 PF00486 Transcriptional regulatory protein, C terminal DKE48_RS00600 PF00106 short chain dehydrogenase DKE48_RS00610 PF00155 Aminotransferase class I and II DKE48_RS00615 PF04286 Protein of unknown function (DUF445) DKE48_RS00675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKE48_RS00675 PF00986 DNA gyrase B subunit, carboxyl terminus DKE48_RS00675 PF01751 Toprim domain DKE48_RS00675 PF00204 DNA gyrase B DKE48_RS00685 PF03561 Allantoicase repeat DKE48_RS00690 PF01494 FAD binding domain DKE48_RS00715 PF00576 HIUase/Transthyretin family DKE48_RS00770 PF03960 ArsC family DKE48_RS00775 PF03372 Endonuclease/Exonuclease/phosphatase family DKE48_RS00815 PF01820 D-ala D-ala ligase N-terminus DKE48_RS00815 PF07478 D-ala D-ala ligase C-terminus DKE48_RS00820 PF08478 POTRA domain, FtsQ-type DKE48_RS00820 PF03799 Cell division protein FtsQ DKE48_RS00835 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase DKE48_RS00865 PF01169 Uncharacterized protein family UPF0016 DKE48_RS00870 PF00258 Flavodoxin DKE48_RS00870 PF01613 Flavin reductase like domain DKE48_RS00875 PF03692 Putative zinc- or iron-chelating domain DKE48_RS00885 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DKE48_RS00885 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DKE48_RS00885 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DKE48_RS00885 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DKE48_RS00920 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) DKE48_RS00925 PF04452 RNA methyltransferase DKE48_RS00930 PF05552 Conserved TM helix DKE48_RS00930 PF00924 Mechanosensitive ion channel DKE48_RS00950 PF00857 Isochorismatase family DKE48_RS00955 PF01037 Lrp/AsnC ligand binding domain DKE48_RS00985 PF00474 Sodium:solute symporter family DKE48_RS00990 PF04341 Protein of unknown function, DUF485 DKE48_RS01025 PF00440 Bacterial regulatory proteins, tetR family DKE48_RS01025 PF16925 Tetracyclin repressor-like, C-terminal domain DKE48_RS01030 PF08240 Alcohol dehydrogenase GroES-like domain DKE48_RS01030 PF00107 Zinc-binding dehydrogenase DKE48_RS01045 PF02581 Thiamine monophosphate synthase DKE48_RS01045 PF03070 TENA/THI-4/PQQC family DKE48_RS01045 PF08543 Phosphomethylpyrimidine kinase DKE48_RS01055 PF07690 Major Facilitator Superfamily DKE48_RS01060 PF00436 Single-strand binding protein family DKE48_RS01070 PF03591 AzlC protein DKE48_RS01085 PF00155 Aminotransferase class I and II DKE48_RS01085 PF00392 Bacterial regulatory proteins, gntR family DKE48_RS01100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE48_RS01110 PF02678 Pirin DKE48_RS01110 PF05726 Pirin C-terminal cupin domain DKE48_RS01160 PF00248 Aldo/keto reductase family DKE48_RS01195 PF01638 HxlR-like helix-turn-helix DKE48_RS01345 PF18273 Type III R-M EcoP15I C-terminal domain DKE48_RS01345 PF01555 DNA methylase DKE48_RS01405 PF00230 Major intrinsic protein DKE48_RS01420 PF00977 Histidine biosynthesis protein DKE48_RS01450 PF00977 Histidine biosynthesis protein DKE48_RS01465 PF00117 Glutamine amidotransferase class-I DKE48_RS01470 PF00475 Imidazoleglycerol-phosphate dehydratase DKE48_RS01490 PF00583 Acetyltransferase (GNAT) family DKE48_RS01505 PF00512 His Kinase A (phospho-acceptor) domain DKE48_RS01505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKE48_RS01505 PF00672 HAMP domain DKE48_RS01510 PF00486 Transcriptional regulatory protein, C terminal DKE48_RS01510 PF00072 Response regulator receiver domain DKE48_RS01525 PF00106 short chain dehydrogenase DKE48_RS01660 PF08245 Mur ligase middle domain DKE48_RS01660 PF02875 Mur ligase family, glutamate ligase domain DKE48_RS01660 PF01225 Mur ligase family, catalytic domain DKE48_RS01675 PF13847 Methyltransferase domain DKE48_RS01695 PF04350 Pilus assembly protein, PilO DKE48_RS01730 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DKE48_RS01730 PF07992 Pyridine nucleotide-disulphide oxidoreductase DKE48_RS01740 PF04011 LemA family DKE48_RS01755 PF07963 Prokaryotic N-terminal methylation motif DKE48_RS01755 PF00114 Pilin (bacterial filament) DKE48_RS01765 PF15864 Protein glycosylation ligase DKE48_RS01765 PF11846 Virulence factor membrane-bound polymerase, C-terminal DKE48_RS01765 PF04932 O-Antigen ligase DKE48_RS01780 PF00210 Ferritin-like domain DKE48_RS01785 PF04324 BFD-like [2Fe-2S] binding domain DKE48_RS01790 PF01042 Endoribonuclease L-PSP DKE48_RS01805 PF01192 RNA polymerase Rpb6 DKE48_RS01815 PF02401 LytB protein DKE48_RS01855 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor DKE48_RS01855 PF07963 Prokaryotic N-terminal methylation motif DKE48_RS01860 PF00886 Ribosomal protein S16 DKE48_RS01865 PF01782 RimM N-terminal domain DKE48_RS01865 PF05239 PRC-barrel domain DKE48_RS01875 PF01245 Ribosomal protein L19 DKE48_RS01885 PF03280 Proteobacterial lipase chaperone protein DKE48_RS01920 PF01565 FAD binding domain DKE48_RS01920 PF02913 FAD linked oxidases, C-terminal domain DKE48_RS01935 PF03992 Antibiotic biosynthesis monooxygenase DKE48_RS01940 PF02525 Flavodoxin-like fold DKE48_RS01955 PF12805 FUSC-like inner membrane protein yccS DKE48_RS02020 PF00202 Aminotransferase class-III DKE48_RS02040 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family DKE48_RS02070 PF03466 LysR substrate binding domain DKE48_RS02070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE48_RS02090 PF02091 Glycyl-tRNA synthetase alpha subunit DKE48_RS02120 PF04024 PspC domain DKE48_RS02140 PF08501 Shikimate dehydrogenase substrate binding domain DKE48_RS02140 PF01488 Shikimate / quinate 5-dehydrogenase DKE48_RS02140 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DKE48_RS02155 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DKE48_RS02155 PF02779 Transketolase, pyrimidine binding domain DKE48_RS02155 PF02780 Transketolase, C-terminal domain DKE48_RS02160 PF00459 Inositol monophosphatase family DKE48_RS02170 PF00005 ABC transporter DKE48_RS02175 PF02405 Permease MlaE DKE48_RS02200 PF03641 Possible lysine decarboxylase DKE48_RS02205 PF00293 NUDIX domain DKE48_RS02210 PF00156 Phosphoribosyl transferase domain DKE48_RS02230 PF01553 Acyltransferase DKE48_RS02255 PF02082 Transcriptional regulator DKE48_RS02260 PF00175 Oxidoreductase NAD-binding domain DKE48_RS02260 PF00042 Globin DKE48_RS02260 PF00970 Oxidoreductase FAD-binding domain DKE48_RS02280 PF00338 Ribosomal protein S10p/S20e DKE48_RS02290 PF00573 Ribosomal protein L4/L1 family DKE48_RS02295 PF00276 Ribosomal protein L23 DKE48_RS02300 PF00181 Ribosomal Proteins L2, RNA binding domain DKE48_RS02300 PF03947 Ribosomal Proteins L2, C-terminal domain DKE48_RS02305 PF00203 Ribosomal protein S19 DKE48_RS02310 PF00237 Ribosomal protein L22p/L17e DKE48_RS02320 PF00252 Ribosomal protein L16p/L10e DKE48_RS02325 PF00831 Ribosomal L29 protein DKE48_RS02330 PF00366 Ribosomal protein S17 DKE48_RS02340 PF00467 KOW motif DKE48_RS02340 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DKE48_RS02350 PF00253 Ribosomal protein S14p/S29e DKE48_RS02355 PF00410 Ribosomal protein S8 DKE48_RS02360 PF00347 Ribosomal protein L6 DKE48_RS02365 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DKE48_RS02375 PF00327 Ribosomal protein L30p/L7e DKE48_RS02380 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DKE48_RS02385 PF00344 SecY translocase DKE48_RS02390 PF00444 Ribosomal protein L36 DKE48_RS02395 PF00416 Ribosomal protein S13/S18 DKE48_RS02430 PF03937 Flavinator of succinate dehydrogenase DKE48_RS02460 PF09526 Probable metal-binding protein (DUF2387) DKE48_RS02515 PF01557 Fumarylacetoacetate (FAA) hydrolase family DKE48_RS02535 PF03358 NADPH-dependent FMN reductase DKE48_RS02575 PF01551 Peptidase family M23 DKE48_RS02575 PF01464 Transglycosylase SLT domain DKE48_RS02575 PF10145 Phage-related minor tail protein DKE48_RS02585 PF00056 lactate/malate dehydrogenase, NAD binding domain DKE48_RS02585 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DKE48_RS02615 PF01066 CDP-alcohol phosphatidyltransferase DKE48_RS02740 PF04386 Stringent starvation protein B DKE48_RS02745 PF13417 Glutathione S-transferase, N-terminal domain DKE48_RS02745 PF00043 Glutathione S-transferase, C-terminal domain DKE48_RS02750 PF00380 Ribosomal protein S9/S16 DKE48_RS02765 PF00398 Ribosomal RNA adenine dimethylase DKE48_RS02810 PF01389 OmpA-like transmembrane domain DKE48_RS02810 PF00691 OmpA family DKE48_RS02820 PF13689 YfiR/HmsC-like DKE48_RS02860 PF04273 Putative phosphatase (DUF442) DKE48_RS02860 PF00753 Metallo-beta-lactamase superfamily DKE48_RS02870 PF00085 Thioredoxin DKE48_RS02875 PF03061 Thioesterase superfamily DKE48_RS02900 PF01266 FAD dependent oxidoreductase DKE48_RS02900 PF05430 S-adenosyl-L-methionine-dependent methyltransferase DKE48_RS02910 PF03795 YCII-related domain DKE48_RS02915 PF04279 Intracellular septation protein A DKE48_RS02930 PF04002 RadC-like JAB domain DKE48_RS02940 PF07549 SecD/SecF GG Motif DKE48_RS02940 PF02355 Protein export membrane protein DKE48_RS02950 PF02699 Preprotein translocase subunit DKE48_RS02990 PF01063 Amino-transferase class IV DKE48_RS03000 PF00884 Sulfatase DKE48_RS03020 PF13439 Glycosyltransferase Family 4 DKE48_RS03020 PF00534 Glycosyl transferases group 1 DKE48_RS03090 PF02770 Acyl-CoA dehydrogenase, middle domain DKE48_RS03090 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DKE48_RS03090 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DKE48_RS03090 PF12806 Acetyl-CoA dehydrogenase C-terminal like DKE48_RS03110 PF02696 Uncharacterized ACR, YdiU/UPF0061 family DKE48_RS03140 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DKE48_RS03145 PF00291 Pyridoxal-phosphate dependent enzyme DKE48_RS03180 PF08245 Mur ligase middle domain DKE48_RS03180 PF02875 Mur ligase family, glutamate ligase domain DKE48_RS03195 PF00753 Metallo-beta-lactamase superfamily DKE48_RS03215 PF07690 Major Facilitator Superfamily DKE48_RS03215 PF00083 Sugar (and other) transporter DKE48_RS03255 PF02311 AraC-like ligand binding domain DKE48_RS03255 PF12833 Helix-turn-helix domain DKE48_RS03260 PF02515 CoA-transferase family III DKE48_RS03285 PF00893 Small Multidrug Resistance protein DKE48_RS03295 PF00108 Thiolase, N-terminal domain DKE48_RS03295 PF02803 Thiolase, C-terminal domain DKE48_RS03310 PF01139 tRNA-splicing ligase RtcB DKE48_RS03315 PF00324 Amino acid permease DKE48_RS03320 PF08468 Methyltransferase small domain N-terminal DKE48_RS03320 PF05175 Methyltransferase small domain DKE48_RS03340 PF01741 Large-conductance mechanosensitive channel, MscL DKE48_RS03395 PF01571 Aminomethyltransferase folate-binding domain DKE48_RS03410 PF08274 PhnA Zinc-Ribbon DKE48_RS03410 PF03831 PhnA domain DKE48_RS03445 PF00072 Response regulator receiver domain DKE48_RS03455 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term DKE48_RS03455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DKE48_RS03485 PF04304 Protein of unknown function (DUF454) DKE48_RS03490 PF17969 L,D-transpeptidase C-terminal domain DKE48_RS03490 PF03734 L,D-transpeptidase catalytic domain DKE48_RS03550 PF00881 Nitroreductase family DKE48_RS03620 PF02686 Glu-tRNAGln amidotransferase C subunit DKE48_RS03630 PF04085 rod shape-determining protein MreC DKE48_RS03640 PF02545 Maf-like protein DKE48_RS03655 PF06974 Protein of unknown function (DUF1298) DKE48_RS03655 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain DKE48_RS03675 PF02525 Flavodoxin-like fold DKE48_RS03695 PF02673 Bacitracin resistance protein BacA DKE48_RS03735 PF00293 NUDIX domain DKE48_RS03735 PF09297 NADH pyrophosphatase zinc ribbon domain DKE48_RS03745 PF04303 PrpF protein DKE48_RS03750 PF00348 Polyprenyl synthetase DKE48_RS03755 PF04237 YjbR DKE48_RS03760 PF01145 SPFH domain / Band 7 family DKE48_RS03770 PF01734 Patatin-like phospholipase DKE48_RS03800 PF00486 Transcriptional regulatory protein, C terminal DKE48_RS03800 PF00072 Response regulator receiver domain DKE48_RS03870 PF01906 Putative heavy-metal-binding DKE48_RS03875 PF01906 Putative heavy-metal-binding DKE48_RS03885 PF00873 AcrB/AcrD/AcrF family DKE48_RS03890 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DKE48_RS03890 PF00529 HlyD membrane-fusion protein of T1SS DKE48_RS03915 PF00829 Ribosomal prokaryotic L21 protein DKE48_RS03945 PF00588 SpoU rRNA Methylase family DKE48_RS03955 PF03358 NADPH-dependent FMN reductase DKE48_RS03980 PF04359 Protein of unknown function (DUF493) DKE48_RS04010 PF00285 Citrate synthase, C-terminal domain DKE48_RS04020 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DKE48_RS04025 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DKE48_RS04030 PF00890 FAD binding domain DKE48_RS04030 PF02910 Fumarate reductase flavoprotein C-term DKE48_RS04070 PF02629 CoA binding domain DKE48_RS04070 PF00549 CoA-ligase DKE48_RS04075 PF00579 tRNA synthetases class I (W and Y) DKE48_RS04080 PF05661 Protein of unknown function (DUF808) DKE48_RS04085 PF04228 Putative neutral zinc metallopeptidase DKE48_RS04160 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DKE48_RS04170 PF00582 Universal stress protein family DKE48_RS04180 PF01042 Endoribonuclease L-PSP DKE48_RS04220 PF01728 FtsJ-like methyltransferase DKE48_RS04270 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DKE48_RS04270 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DKE48_RS04350 PF01435 Peptidase family M48 DKE48_RS04375 PF01464 Transglycosylase SLT domain DKE48_RS04375 PF00497 Bacterial extracellular solute-binding proteins, family 3 DKE48_RS04445 PF00440 Bacterial regulatory proteins, tetR family DKE48_RS04475 PF00529 HlyD membrane-fusion protein of T1SS DKE48_RS04475 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DKE48_RS04485 PF00881 Nitroreductase family DKE48_RS04510 PF02634 FdhD/NarQ family DKE48_RS04525 PF00152 tRNA synthetases class II (D, K and N) DKE48_RS04535 PF18073 Rubredoxin metal binding domain DKE48_RS04545 PF00324 Amino acid permease DKE48_RS04560 PF01678 Diaminopimelate epimerase DKE48_RS04570 PF01810 LysE type translocator DKE48_RS04585 PF00766 Electron transfer flavoprotein FAD-binding domain DKE48_RS04585 PF01012 Electron transfer flavoprotein domain DKE48_RS04670 PF00005 ABC transporter DKE48_RS04695 PF00551 Formyl transferase DKE48_RS04700 PF02769 AIR synthase related protein, C-terminal domain DKE48_RS04700 PF00586 AIR synthase related protein, N-terminal domain DKE48_RS04705 PF01594 AI-2E family transporter DKE48_RS04710 PF08299 Bacterial dnaA protein helix-turn-helix DKE48_RS04710 PF11638 DnaA N-terminal domain DKE48_RS04710 PF00308 Bacterial dnaA protein DKE48_RS04755 PF00691 OmpA family DKE48_RS04770 PF02472 Biopolymer transport protein ExbD/TolR DKE48_RS04780 PF03061 Thioesterase superfamily DKE48_RS04790 PF17864 RuvB AAA lid domain DKE48_RS04790 PF05491 RuvB C-terminal winged helix domain DKE48_RS04790 PF05496 Holliday junction DNA helicase RuvB P-loop domain DKE48_RS04815 PF07690 Major Facilitator Superfamily DKE48_RS04835 PF01784 NIF3 (NGG1p interacting factor 3) DKE48_RS04840 PF00378 Enoyl-CoA hydratase/isomerase DKE48_RS04880 PF04055 Radical SAM superfamily DKE48_RS04895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE48_RS04895 PF03466 LysR substrate binding domain DKE48_RS04900 PF00005 ABC transporter DKE48_RS04900 PF12857 TOBE-like domain DKE48_RS04905 PF00528 Binding-protein-dependent transport system inner membrane component DKE48_RS04910 PF00528 Binding-protein-dependent transport system inner membrane component DKE48_RS04935 PF02223 Thymidylate kinase DKE48_RS04980 PF14622 Ribonuclease-III-like DKE48_RS04980 PF00035 Double-stranded RNA binding motif DKE48_RS04985 PF01926 50S ribosome-binding GTPase DKE48_RS04985 PF07650 KH domain DKE48_RS05000 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ DKE48_RS05055 PF12344 Ultra-violet resistance protein B DKE48_RS05055 PF02151 UvrB/uvrC motif DKE48_RS05055 PF17757 UvrB interaction domain DKE48_RS05055 PF04851 Type III restriction enzyme, res subunit DKE48_RS05055 PF00271 Helicase conserved C-terminal domain DKE48_RS05070 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DKE48_RS05070 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DKE48_RS05090 PF01472 PUA domain DKE48_RS05090 PF00696 Amino acid kinase family DKE48_RS05160 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DKE48_RS05165 PF07992 Pyridine nucleotide-disulphide oxidoreductase DKE48_RS05170 PF00768 D-alanyl-D-alanine carboxypeptidase DKE48_RS05170 PF07943 Penicillin-binding protein 5, C-terminal domain DKE48_RS05185 PF00849 RNA pseudouridylate synthase DKE48_RS05220 PF02567 Phenazine biosynthesis-like protein DKE48_RS05260 PF02581 Thiamine monophosphate synthase DKE48_RS05275 PF00849 RNA pseudouridylate synthase DKE48_RS05390 PF08328 Adenylosuccinate lyase C-terminal DKE48_RS05390 PF00206 Lyase DKE48_RS05405 PF00293 NUDIX domain DKE48_RS05410 PF00132 Bacterial transferase hexapeptide (six repeats) DKE48_RS05415 PF07943 Penicillin-binding protein 5, C-terminal domain DKE48_RS05415 PF00768 D-alanyl-D-alanine carboxypeptidase DKE48_RS05450 PF01551 Peptidase family M23 DKE48_RS05450 PF01476 LysM domain DKE48_RS05455 PF03466 LysR substrate binding domain DKE48_RS05455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE48_RS05470 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DKE48_RS05480 PF01197 Ribosomal protein L31 DKE48_RS05510 PF04328 Selenoprotein, putative DKE48_RS05575 PF02678 Pirin DKE48_RS05575 PF17954 Quercetinase C-terminal cupin domain DKE48_RS05640 PF01713 Smr domain DKE48_RS05645 PF00218 Indole-3-glycerol phosphate synthase DKE48_RS05665 PF01433 Peptidase family M1 domain DKE48_RS05665 PF11838 ERAP1-like C-terminal domain DKE48_RS05670 PF00117 Glutamine amidotransferase class-I DKE48_RS05730 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DKE48_RS05730 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DKE48_RS05735 PF01784 NIF3 (NGG1p interacting factor 3) DKE48_RS05760 PF04452 RNA methyltransferase DKE48_RS05765 PF02219 Methylenetetrahydrofolate reductase DKE48_RS05810 PF07690 Major Facilitator Superfamily DKE48_RS05860 PF05036 Sporulation related domain DKE48_RS05860 PF03330 Lytic transglycolase DKE48_RS05880 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term DKE48_RS05880 PF14489 QueF-like protein DKE48_RS05890 PF00005 ABC transporter DKE48_RS06230 PF00497 Bacterial extracellular solute-binding proteins, family 3 DKE48_RS06240 PF00528 Binding-protein-dependent transport system inner membrane component DKE48_RS06250 PF00893 Small Multidrug Resistance protein DKE48_RS06255 PF12838 4Fe-4S dicluster domain DKE48_RS06280 PF18389 TrmO C-terminal domain DKE48_RS06280 PF01980 tRNA-methyltransferase O DKE48_RS06295 PF04076 Bacterial OB fold (BOF) protein DKE48_RS06330 PF01513 ATP-NAD kinase DKE48_RS06335 PF07023 Protein of unknown function (DUF1315) DKE48_RS06340 PF02885 Glycosyl transferase family, helical bundle domain DKE48_RS06340 PF00591 Glycosyl transferase family, a/b domain DKE48_RS06355 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DKE48_RS06355 PF02770 Acyl-CoA dehydrogenase, middle domain DKE48_RS06355 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DKE48_RS06370 PF01817 Chorismate mutase type II DKE48_RS06370 PF01842 ACT domain DKE48_RS06370 PF00800 Prephenate dehydratase DKE48_RS06385 PF03781 Sulfatase-modifying factor enzyme 1 DKE48_RS06410 PF05690 Thiazole biosynthesis protein ThiG DKE48_RS06435 PF00313 'Cold-shock' DNA-binding domain DKE48_RS06440 PF00270 DEAD/DEAH box helicase DKE48_RS06440 PF00271 Helicase conserved C-terminal domain DKE48_RS06450 PF00881 Nitroreductase family DKE48_RS06455 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DKE48_RS06455 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DKE48_RS06510 PF09424 Yqey-like protein DKE48_RS06515 PF01165 Ribosomal protein S21 DKE48_RS06575 PF07262 CDI immunity protein DKE48_RS06580 PF07262 CDI immunity protein DKE48_RS06610 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family DKE48_RS06660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE48_RS06660 PF03466 LysR substrate binding domain DKE48_RS06670 PF00171 Aldehyde dehydrogenase family DKE48_RS06720 PF00561 alpha/beta hydrolase fold DKE48_RS06795 PF12146 Serine aminopeptidase, S33 DKE48_RS06815 PF12833 Helix-turn-helix domain DKE48_RS06815 PF06719 AraC-type transcriptional regulator N-terminus DKE48_RS06835 PF04403 Paraquat-inducible protein A DKE48_RS06855 PF00576 HIUase/Transthyretin family DKE48_RS06865 PF00072 Response regulator receiver domain DKE48_RS06865 PF00486 Transcriptional regulatory protein, C terminal DKE48_RS06915 PF00486 Transcriptional regulatory protein, C terminal DKE48_RS06915 PF00072 Response regulator receiver domain DKE48_RS06930 PF00892 EamA-like transporter family DKE48_RS06935 PF07995 Glucose / Sorbosone dehydrogenase DKE48_RS06985 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DKE48_RS06985 PF02844 Phosphoribosylglycinamide synthetase, N domain DKE48_RS06985 PF02843 Phosphoribosylglycinamide synthetase, C domain DKE48_RS06995 PF02954 Bacterial regulatory protein, Fis family DKE48_RS07035 PF08379 Bacterial transglutaminase-like N-terminal region DKE48_RS07035 PF01841 Transglutaminase-like superfamily DKE48_RS07050 PF00772 DnaB-like helicase N terminal domain DKE48_RS07050 PF03796 DnaB-like helicase C terminal domain DKE48_RS07060 PF01084 Ribosomal protein S18 DKE48_RS07065 PF01250 Ribosomal protein S6 DKE48_RS07075 PF03626 Prokaryotic Cytochrome C oxidase subunit IV DKE48_RS07170 PF00472 RF-1 domain DKE48_RS07170 PF03462 PCRF domain DKE48_RS07195 PF00106 short chain dehydrogenase DKE48_RS07220 PF03109 ABC1 family DKE48_RS07245 PF02669 K+-transporting ATPase, c chain DKE48_RS07255 PF00072 Response regulator receiver domain DKE48_RS07255 PF00486 Transcriptional regulatory protein, C terminal DKE48_RS07270 PF03232 Ubiquinone biosynthesis protein COQ7 DKE48_RS07275 PF07690 Major Facilitator Superfamily DKE48_RS07300 PF00330 Aconitase family (aconitate hydratase) DKE48_RS07300 PF06434 Aconitate hydratase 2 N-terminus DKE48_RS07300 PF11791 Aconitate B N-terminal domain DKE48_RS07330 PF04284 Protein of unknown function (DUF441) DKE48_RS07360 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DKE48_RS07375 PF17209 Hfq protein DKE48_RS07410 PF02540 NAD synthase DKE48_RS07410 PF00958 GMP synthase C terminal domain DKE48_RS07410 PF00117 Glutamine amidotransferase class-I DKE48_RS07420 PF06751 Ethanolamine ammonia lyase large subunit (EutB) DKE48_RS07425 PF13520 Amino acid permease DKE48_RS07430 PF00171 Aldehyde dehydrogenase family DKE48_RS07445 PF00465 Iron-containing alcohol dehydrogenase DKE48_RS07460 PF06445 GyrI-like small molecule binding domain DKE48_RS07465 PF02110 Hydroxyethylthiazole kinase family DKE48_RS07495 PF13954 PapC N-terminal domain DKE48_RS07495 PF00577 Outer membrane usher protein DKE48_RS07495 PF13953 PapC C-terminal domain DKE48_RS07525 PF01817 Chorismate mutase type II DKE48_RS07565 PF03328 HpcH/HpaI aldolase/citrate lyase family DKE48_RS07595 PF00924 Mechanosensitive ion channel DKE48_RS07675 PF03594 Benzoate membrane transport protein DKE48_RS07680 PF01037 Lrp/AsnC ligand binding domain DKE48_RS07685 PF01810 LysE type translocator DKE48_RS07695 PF03466 LysR substrate binding domain DKE48_RS07695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE48_RS07715 PF01575 MaoC like domain DKE48_RS07785 PF01451 Low molecular weight phosphotyrosine protein phosphatase DKE48_RS07790 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DKE48_RS07790 PF01565 FAD binding domain DKE48_RS07865 PF00364 Biotin-requiring enzyme DKE48_RS07885 PF00486 Transcriptional regulatory protein, C terminal DKE48_RS07885 PF00072 Response regulator receiver domain DKE48_RS07930 PF02391 MoaE protein DKE48_RS07975 PF02635 DsrE/DsrF-like family DKE48_RS07980 PF16363 GDP-mannose 4,6 dehydratase DKE48_RS08010 PF01266 FAD dependent oxidoreductase DKE48_RS08020 PF02542 YgbB family DKE48_RS08040 PF00072 Response regulator receiver domain DKE48_RS08040 PF00158 Sigma-54 interaction domain DKE48_RS08040 PF02954 Bacterial regulatory protein, Fis family DKE48_RS08060 PF00696 Amino acid kinase family DKE48_RS08105 PF07977 FabA-like domain DKE48_RS08125 PF02631 RecX family DKE48_RS08140 PF13419 Haloacid dehalogenase-like hydrolase DKE48_RS08170 PF00324 Amino acid permease DKE48_RS08195 PF00916 Sulfate permease family DKE48_RS08195 PF01740 STAS domain DKE48_RS08290 PF00202 Aminotransferase class-III DKE48_RS08295 PF00571 CBS domain DKE48_RS08295 PF01380 SIS domain DKE48_RS08345 PF08173 Membrane bound YbgT-like protein DKE48_RS08395 PF02386 Cation transport protein DKE48_RS08435 PF02617 ATP-dependent Clp protease adaptor protein ClpS DKE48_RS08440 PF17871 AAA lid domain DKE48_RS08440 PF07724 AAA domain (Cdc48 subfamily) DKE48_RS08440 PF00004 ATPase family associated with various cellular activities (AAA) DKE48_RS08440 PF02861 Clp amino terminal domain, pathogenicity island component DKE48_RS08440 PF10431 C-terminal, D2-small domain, of ClpB protein DKE48_RS08490 PF00117 Glutamine amidotransferase class-I DKE48_RS08490 PF06418 CTP synthase N-terminus DKE48_RS08505 PF04239 Protein of unknown function (DUF421) DKE48_RS08515 PF04977 Septum formation initiator DKE48_RS08525 PF01144 Coenzyme A transferase DKE48_RS08530 PF01144 Coenzyme A transferase DKE48_RS08555 PF02627 Carboxymuconolactone decarboxylase family DKE48_RS08565 PF00775 Dioxygenase DKE48_RS08575 PF05048 Periplasmic copper-binding protein (NosD) DKE48_RS08645 PF07690 Major Facilitator Superfamily DKE48_RS08675 PF00355 Rieske [2Fe-2S] domain DKE48_RS08675 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DKE48_RS08695 PF01613 Flavin reductase like domain DKE48_RS08730 PF01144 Coenzyme A transferase DKE48_RS08740 PF04444 Catechol dioxygenase N terminus DKE48_RS08740 PF00775 Dioxygenase DKE48_RS08745 PF02426 Muconolactone delta-isomerase DKE48_RS08795 PF00561 alpha/beta hydrolase fold DKE48_RS08810 PF01872 RibD C-terminal domain DKE48_RS08830 PF12706 Beta-lactamase superfamily domain DKE48_RS08835 PF00440 Bacterial regulatory proteins, tetR family DKE48_RS08835 PF08359 YsiA-like protein, C-terminal region DKE48_RS08895 PF07690 Major Facilitator Superfamily DKE48_RS08900 PF04909 Amidohydrolase DKE48_RS08975 PF07690 Major Facilitator Superfamily DKE48_RS09015 PF14572 Phosphoribosyl synthetase-associated domain DKE48_RS09015 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DKE48_RS09045 PF01425 Amidase DKE48_RS09055 PF07690 Major Facilitator Superfamily DKE48_RS09090 PF02824 TGS domain DKE48_RS09090 PF04607 Region found in RelA / SpoT proteins DKE48_RS09090 PF13291 ACT domain DKE48_RS09125 PF00106 short chain dehydrogenase DKE48_RS09190 PF16970 Type-1 fimbrial protein, A DKE48_RS09265 PF04055 Radical SAM superfamily DKE48_RS09265 PF13186 Iron-sulfur cluster-binding domain DKE48_RS09270 PF05402 Coenzyme PQQ synthesis protein D (PqqD) DKE48_RS09275 PF03070 TENA/THI-4/PQQC family DKE48_RS09340 PF03621 MbtH-like protein DKE48_RS09390 PF03459 TOBE domain DKE48_RS09390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE48_RS09420 PF01613 Flavin reductase like domain DKE48_RS09435 PF01738 Dienelactone hydrolase family DKE48_RS09495 PF01144 Coenzyme A transferase DKE48_RS09515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE48_RS09515 PF03466 LysR substrate binding domain DKE48_RS09585 PF00392 Bacterial regulatory proteins, gntR family DKE48_RS09585 PF07702 UTRA domain DKE48_RS09625 PF00753 Metallo-beta-lactamase superfamily DKE48_RS09625 PF04273 Putative phosphatase (DUF442) DKE48_RS09635 PF01062 Bestrophin, RFP-TM, chloride channel DKE48_RS09640 PF08240 Alcohol dehydrogenase GroES-like domain DKE48_RS09640 PF00107 Zinc-binding dehydrogenase DKE48_RS09665 PF00676 Dehydrogenase E1 component DKE48_RS09710 PF00004 ATPase family associated with various cellular activities (AAA) DKE48_RS09710 PF17862 AAA+ lid domain DKE48_RS09710 PF01434 Peptidase family M41 DKE48_RS09740 PF01612 3'-5' exonuclease DKE48_RS09740 PF00570 HRDC domain DKE48_RS09850 PF02684 Lipid-A-disaccharide synthetase DKE48_RS09875 PF01925 Sulfite exporter TauE/SafE DKE48_RS09955 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DKE48_RS09955 PF02770 Acyl-CoA dehydrogenase, middle domain DKE48_RS09955 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DKE48_RS09990 PF02082 Transcriptional regulator DKE48_RS10005 PF01521 Iron-sulphur cluster biosynthesis DKE48_RS10020 PF00111 2Fe-2S iron-sulfur cluster binding domain DKE48_RS10060 PF13460 NAD(P)H-binding DKE48_RS10100 PF00528 Binding-protein-dependent transport system inner membrane component DKE48_RS10130 PF00593 TonB dependent receptor DKE48_RS10130 PF07715 TonB-dependent Receptor Plug Domain DKE48_RS10140 PF01618 MotA/TolQ/ExbB proton channel family DKE48_RS10180 PF03956 Lysine exporter LysO DKE48_RS10195 PF00216 Bacterial DNA-binding protein DKE48_RS10200 PF00575 S1 RNA binding domain DKE48_RS10240 PF07963 Prokaryotic N-terminal methylation motif DKE48_RS10240 PF11612 Type II secretion system (T2SS), protein J DKE48_RS10275 PF02348 Cytidylyltransferase DKE48_RS10285 PF00664 ABC transporter transmembrane region DKE48_RS10285 PF00005 ABC transporter DKE48_RS10305 PF13614 AAA domain DKE48_RS10320 PF01636 Phosphotransferase enzyme family DKE48_RS10335 PF01116 Fructose-bisphosphate aldolase class-II DKE48_RS10355 PF02545 Maf-like protein DKE48_RS10360 PF08007 Cupin superfamily protein DKE48_RS10375 PF00375 Sodium:dicarboxylate symporter family DKE48_RS10385 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) DKE48_RS10405 PF01597 Glycine cleavage H-protein DKE48_RS10410 PF02146 Sir2 family DKE48_RS10420 PF01037 Lrp/AsnC ligand binding domain DKE48_RS10430 PF04229 GrpB protein DKE48_RS10445 PF09992 Phosphodiester glycosidase DKE48_RS10455 PF04264 YceI-like domain DKE48_RS10470 PF02773 S-adenosylmethionine synthetase, C-terminal domain DKE48_RS10470 PF02772 S-adenosylmethionine synthetase, central domain DKE48_RS10470 PF00438 S-adenosylmethionine synthetase, N-terminal domain DKE48_RS10530 PF16970 Type-1 fimbrial protein, A DKE48_RS10565 PF00892 EamA-like transporter family DKE48_RS10615 PF01709 Transcriptional regulator DKE48_RS10675 PF03180 NLPA lipoprotein DKE48_RS10680 PF09383 NIL domain DKE48_RS10680 PF00005 ABC transporter DKE48_RS10730 PF02222 ATP-grasp domain DKE48_RS10760 PF01641 SelR domain DKE48_RS10765 PF00155 Aminotransferase class I and II DKE48_RS10785 PF00588 SpoU rRNA Methylase family DKE48_RS10805 PF13192 Thioredoxin domain DKE48_RS10805 PF07992 Pyridine nucleotide-disulphide oxidoreductase DKE48_RS10830 PF01022 Bacterial regulatory protein, arsR family DKE48_RS10835 PF03960 ArsC family DKE48_RS10845 PF01979 Amidohydrolase family DKE48_RS10845 PF13382 Adenine deaminase C-terminal domain DKE48_RS10885 PF00005 ABC transporter DKE48_RS10900 PF00083 Sugar (and other) transporter DKE48_RS10920 PF01654 Cytochrome bd terminal oxidase subunit I DKE48_RS10925 PF02322 Cytochrome bd terminal oxidase subunit II DKE48_RS10935 PF00155 Aminotransferase class I and II DKE48_RS10935 PF00392 Bacterial regulatory proteins, gntR family DKE48_RS10955 PF00698 Acyl transferase domain DKE48_RS10970 PF01039 Carboxyl transferase domain DKE48_RS10990 PF07690 Major Facilitator Superfamily DKE48_RS11010 PF04172 LrgB-like family DKE48_RS11035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE48_RS11035 PF03466 LysR substrate binding domain DKE48_RS11090 PF00005 ABC transporter DKE48_RS11115 PF00072 Response regulator receiver domain DKE48_RS11130 PF13404 AsnC-type helix-turn-helix domain DKE48_RS11130 PF01037 Lrp/AsnC ligand binding domain DKE48_RS11215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE48_RS11215 PF03466 LysR substrate binding domain DKE48_RS11245 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DKE48_RS11245 PF02770 Acyl-CoA dehydrogenase, middle domain DKE48_RS11245 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DKE48_RS11255 PF00378 Enoyl-CoA hydratase/isomerase DKE48_RS11260 PF02785 Biotin carboxylase C-terminal domain DKE48_RS11260 PF18140 Propionyl-coenzyme A carboxylase BT domain DKE48_RS11260 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DKE48_RS11260 PF00364 Biotin-requiring enzyme DKE48_RS11260 PF00289 Biotin carboxylase, N-terminal domain DKE48_RS11315 PF01144 Coenzyme A transferase DKE48_RS11335 PF00378 Enoyl-CoA hydratase/isomerase DKE48_RS11355 PF09339 IclR helix-turn-helix domain DKE48_RS11360 PF07690 Major Facilitator Superfamily DKE48_RS11375 PF09339 IclR helix-turn-helix domain DKE48_RS11380 PF02515 CoA-transferase family III DKE48_RS11400 PF00266 Aminotransferase class-V DKE48_RS11425 PF07702 UTRA domain DKE48_RS11425 PF00392 Bacterial regulatory proteins, gntR family DKE48_RS11440 PF02525 Flavodoxin-like fold DKE48_RS11445 PF03466 LysR substrate binding domain DKE48_RS11445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE48_RS11450 PF02627 Carboxymuconolactone decarboxylase family DKE48_RS11465 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin DKE48_RS11475 PF00171 Aldehyde dehydrogenase family DKE48_RS11510 PF01292 Prokaryotic cytochrome b561 DKE48_RS11520 PF01638 HxlR-like helix-turn-helix DKE48_RS11545 PF00132 Bacterial transferase hexapeptide (six repeats) DKE48_RS11595 PF06243 Phenylacetic acid degradation B DKE48_RS11600 PF05138 Phenylacetic acid catabolic protein DKE48_RS11650 PF05544 Proline racemase DKE48_RS11655 PF00392 Bacterial regulatory proteins, gntR family DKE48_RS11680 PF00376 MerR family regulatory protein DKE48_RS11680 PF09278 MerR, DNA binding DKE48_RS11690 PF02677 Epoxyqueuosine reductase QueH DKE48_RS11710 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DKE48_RS11715 PF03466 LysR substrate binding domain DKE48_RS11715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE48_RS11735 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE DKE48_RS11740 PF06812 ImpA, N-terminal, type VI secretion system DKE48_RS11805 PF01402 Ribbon-helix-helix protein, copG family DKE48_RS11805 PF08753 NikR C terminal nickel binding domain DKE48_RS11815 PF01638 HxlR-like helix-turn-helix DKE48_RS11840 PF13823 Alcohol dehydrogenase GroES-associated DKE48_RS11840 PF08240 Alcohol dehydrogenase GroES-like domain DKE48_RS11840 PF00107 Zinc-binding dehydrogenase DKE48_RS11905 PF07286 Protein of unknown function (DUF1445) DKE48_RS11910 PF03746 LamB/YcsF family DKE48_RS11940 PF05114 Protein of unknown function (DUF692) DKE48_RS11970 PF00892 EamA-like transporter family DKE48_RS11985 PF06629 MltA-interacting protein MipA DKE48_RS12105 PF00313 'Cold-shock' DNA-binding domain DKE48_RS12110 PF00117 Glutamine amidotransferase class-I DKE48_RS12125 PF13404 AsnC-type helix-turn-helix domain DKE48_RS12125 PF01037 Lrp/AsnC ligand binding domain DKE48_RS12210 PF07517 SecA DEAD-like domain DKE48_RS12210 PF01043 SecA preprotein cross-linking domain DKE48_RS12240 PF17803 Bacterial cadherin-like domain DKE48_RS12315 PF00106 short chain dehydrogenase DKE48_RS12340 PF11953 Domain of unknown function (DUF3470) DKE48_RS12340 PF00037 4Fe-4S binding domain DKE48_RS12365 PF01205 Uncharacterized protein family UPF0029 DKE48_RS12375 PF03412 Peptidase C39 family DKE48_RS12375 PF00005 ABC transporter DKE48_RS12375 PF00664 ABC transporter transmembrane region DKE48_RS12385 PF00005 ABC transporter DKE48_RS12385 PF12399 Branched-chain amino acid ATP-binding cassette transporter DKE48_RS12390 PF03968 OstA-like protein DKE48_RS12490 PF01810 LysE type translocator DKE48_RS12520 PF13742 OB-fold nucleic acid binding domain DKE48_RS12520 PF02601 Exonuclease VII, large subunit DKE48_RS12575 PF06099 Phenol hydroxylase subunit DKE48_RS12585 PF02406 MmoB/DmpM family DKE48_RS12610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE48_RS12610 PF03466 LysR substrate binding domain DKE48_RS12620 PF00866 Ring hydroxylating beta subunit DKE48_RS12640 PF07690 Major Facilitator Superfamily DKE48_RS12680 PF07992 Pyridine nucleotide-disulphide oxidoreductase DKE48_RS12680 PF13192 Thioredoxin domain DKE48_RS12710 PF00872 Transposase, Mutator family DKE48_RS12775 PF02566 OsmC-like protein DKE48_RS12780 PF13545 Crp-like helix-turn-helix domain DKE48_RS12780 PF00027 Cyclic nucleotide-binding domain DKE48_RS12800 PF00709 Adenylosuccinate synthetase DKE48_RS12805 PF13393 Histidyl-tRNA synthetase DKE48_RS12810 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DKE48_RS12810 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DKE48_RS12825 PF02599 Global regulator protein family DKE48_RS12845 PF00962 Adenosine/AMP deaminase DKE48_RS12870 PF02678 Pirin DKE48_RS12870 PF17954 Quercetinase C-terminal cupin domain DKE48_RS12885 PF00106 short chain dehydrogenase DKE48_RS12895 PF04072 Leucine carboxyl methyltransferase DKE48_RS12945 PF00111 2Fe-2S iron-sulfur cluster binding domain DKE48_RS12945 PF00175 Oxidoreductase NAD-binding domain DKE48_RS12960 PF07690 Major Facilitator Superfamily DKE48_RS13030 PF00324 Amino acid permease DKE48_RS13035 PF04958 Arginine N-succinyltransferase beta subunit DKE48_RS13060 PF07729 FCD domain DKE48_RS13060 PF00392 Bacterial regulatory proteins, gntR family DKE48_RS13070 PF00324 Amino acid permease DKE48_RS13090 PF05643 Putative bacterial lipoprotein (DUF799) DKE48_RS13100 PF03783 Curli production assembly/transport component CsgG DKE48_RS13170 PF00563 EAL domain DKE48_RS13170 PF00990 Diguanylate cyclase, GGDEF domain DKE48_RS13170 PF00360 Phytochrome region DKE48_RS13170 PF01590 GAF domain DKE48_RS13205 PF07992 Pyridine nucleotide-disulphide oxidoreductase DKE48_RS13205 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DKE48_RS13210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DKE48_RS13210 PF00005 ABC transporter DKE48_RS13215 PF00528 Binding-protein-dependent transport system inner membrane component DKE48_RS13215 PF12911 N-terminal TM domain of oligopeptide transport permease C DKE48_RS13260 PF02021 Uncharacterised protein family UPF0102 DKE48_RS13300 PF01494 FAD binding domain DKE48_RS13345 PF01812 5-formyltetrahydrofolate cyclo-ligase family DKE48_RS13350 PF04355 SmpA / OmlA family DKE48_RS13350 PF00691 OmpA family DKE48_RS13355 PF13018 Extended Signal Peptide of Type V secretion system DKE48_RS13355 PF03895 YadA-like membrane anchor domain DKE48_RS13355 PF05658 Head domain of trimeric autotransporter adhesin DKE48_RS13355 PF05662 Coiled stalk of trimeric autotransporter adhesin DKE48_RS13375 PF03895 YadA-like membrane anchor domain DKE48_RS13375 PF05658 Head domain of trimeric autotransporter adhesin DKE48_RS13375 PF05662 Coiled stalk of trimeric autotransporter adhesin DKE48_RS13375 PF13018 Extended Signal Peptide of Type V secretion system DKE48_RS13390 PF02590 Predicted SPOUT methyltransferase DKE48_RS13395 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DKE48_RS13425 PF05191 Adenylate kinase, active site lid DKE48_RS13460 PF02492 CobW/HypB/UreG, nucleotide-binding domain DKE48_RS13465 PF01730 UreF DKE48_RS13470 PF02814 UreE urease accessory protein, N-terminal domain DKE48_RS13470 PF05194 UreE urease accessory protein, C-terminal domain DKE48_RS13485 PF00699 Urease beta subunit DKE48_RS13490 PF00547 Urease, gamma subunit DKE48_RS13520 PF00571 CBS domain DKE48_RS13520 PF03471 Transporter associated domain DKE48_RS13520 PF01595 Cyclin M transmembrane N-terminal domain DKE48_RS13540 PF00009 Elongation factor Tu GTP binding domain DKE48_RS13575 PF00301 Rubredoxin DKE48_RS13585 PF00561 alpha/beta hydrolase fold DKE48_RS13605 PF00912 Transglycosylase DKE48_RS13630 PF00484 Carbonic anhydrase DKE48_RS13645 PF07715 TonB-dependent Receptor Plug Domain DKE48_RS13645 PF00593 TonB dependent receptor DKE48_RS13650 PF01106 NifU-like domain DKE48_RS13650 PF01521 Iron-sulphur cluster biosynthesis DKE48_RS13665 PF03781 Sulfatase-modifying factor enzyme 1 DKE48_RS13685 PF01384 Phosphate transporter family DKE48_RS13720 PF07883 Cupin domain DKE48_RS13720 PF12833 Helix-turn-helix domain DKE48_RS13725 PF04960 Glutaminase DKE48_RS13750 PF00171 Aldehyde dehydrogenase family DKE48_RS13785 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DKE48_RS13810 PF01614 Bacterial transcriptional regulator DKE48_RS13810 PF09339 IclR helix-turn-helix domain DKE48_RS13835 PF00378 Enoyl-CoA hydratase/isomerase DKE48_RS13855 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DKE48_RS13870 PF00375 Sodium:dicarboxylate symporter family DKE48_RS13885 PF03061 Thioesterase superfamily DKE48_RS13955 PF00701 Dihydrodipicolinate synthetase family DKE48_RS14085 PF13533 Biotin-lipoyl like DKE48_RS14090 PF03061 Thioesterase superfamily DKE48_RS14095 PF00490 Delta-aminolevulinic acid dehydratase DKE48_RS14100 PF01266 FAD dependent oxidoreductase DKE48_RS14140 PF01168 Alanine racemase, N-terminal domain DKE48_RS14150 PF00437 Type II/IV secretion system protein DKE48_RS14155 PF01475 Ferric uptake regulator family DKE48_RS14160 PF04355 SmpA / OmlA family DKE48_RS14165 PF03658 RnfH family Ubiquitin DKE48_RS14180 PF01814 Hemerythrin HHE cation binding domain DKE48_RS14205 PF00692 dUTPase DKE48_RS14215 PF00691 OmpA family DKE48_RS14215 PF13488 Glycine zipper DKE48_RS14270 PF03588 Leucyl/phenylalanyl-tRNA protein transferase DKE48_RS14275 PF04376 Arginine-tRNA-protein transferase, N terminus DKE48_RS14275 PF04377 Arginine-tRNA-protein transferase, C terminus DKE48_RS14280 PF00583 Acetyltransferase (GNAT) family DKE48_RS14295 PF03143 Elongation factor Tu C-terminal domain DKE48_RS14295 PF03144 Elongation factor Tu domain 2 DKE48_RS14295 PF00009 Elongation factor Tu GTP binding domain DKE48_RS14320 PF00109 Beta-ketoacyl synthase, N-terminal domain DKE48_RS14320 PF02801 Beta-ketoacyl synthase, C-terminal domain DKE48_RS14325 PF03653 Uncharacterised protein family (UPF0093) DKE48_RS14330 PF02678 Pirin DKE48_RS14330 PF05726 Pirin C-terminal cupin domain DKE48_RS14340 PF02540 NAD synthase DKE48_RS14340 PF00795 Carbon-nitrogen hydrolase DKE48_RS14365 PF00171 Aldehyde dehydrogenase family DKE48_RS14385 PF00180 Isocitrate/isopropylmalate dehydrogenase DKE48_RS14410 PF00037 4Fe-4S binding domain DKE48_RS14415 PF01467 Cytidylyltransferase-like DKE48_RS14420 PF01668 SmpB protein DKE48_RS14430 PF02578 Multi-copper polyphenol oxidoreductase laccase DKE48_RS14440 PF13525 Outer membrane lipoprotein DKE48_RS14460 PF03550 Outer membrane lipoprotein LolB DKE48_RS14490 PF14572 Phosphoribosyl synthetase-associated domain DKE48_RS14490 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DKE48_RS14495 PF01386 Ribosomal L25p family DKE48_RS14520 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DKE48_RS14530 PF08543 Phosphomethylpyrimidine kinase DKE48_RS14530 PF03070 TENA/THI-4/PQQC family DKE48_RS14530 PF02581 Thiamine monophosphate synthase DKE48_RS14535 PF01476 LysM domain DKE48_RS14535 PF04972 BON domain DKE48_RS14540 PF00550 Phosphopantetheine attachment site DKE48_RS14555 PF01783 Ribosomal L32p protein family DKE48_RS14560 PF02620 Large ribosomal RNA subunit accumulation protein YceD DKE48_RS14565 PF04315 Elongation factor P hydroxylase DKE48_RS14570 PF01300 Telomere recombination DKE48_RS14585 PF00849 RNA pseudouridylate synthase DKE48_RS14585 PF01479 S4 domain DKE48_RS14600 PF00155 Aminotransferase class I and II DKE48_RS14605 PF04055 Radical SAM superfamily DKE48_RS14605 PF00202 Aminotransferase class-III DKE48_RS14605 PF06968 Biotin and Thiamin Synthesis associated domain DKE48_RS14630 PF00210 Ferritin-like domain DKE48_RS14655 PF01925 Sulfite exporter TauE/SafE DKE48_RS14665 PF03309 Type III pantothenate kinase DKE48_RS14730 PF01048 Phosphorylase superfamily DKE48_RS14735 PF10609 NUBPL iron-transfer P-loop NTPase DKE48_RS14820 PF00970 Oxidoreductase FAD-binding domain DKE48_RS14820 PF00175 Oxidoreductase NAD-binding domain DKE48_RS14825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE48_RS14825 PF03466 LysR substrate binding domain DKE48_RS14835 PF00313 'Cold-shock' DNA-binding domain DKE48_RS14845 PF00361 Proton-conducting membrane transporter DKE48_RS14850 PF00361 Proton-conducting membrane transporter DKE48_RS14855 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DKE48_RS14855 PF00361 Proton-conducting membrane transporter DKE48_RS14860 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DKE48_RS14865 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DKE48_RS14925 PF00072 Response regulator receiver domain DKE48_RS14925 PF00486 Transcriptional regulatory protein, C terminal DKE48_RS14960 PF17074 Darcynin, domain of unknown function DKE48_RS15000 PF16295 Tetracyclin repressor-like, C-terminal domain DKE48_RS15000 PF00440 Bacterial regulatory proteins, tetR family DKE48_RS15010 PF01613 Flavin reductase like domain DKE48_RS15030 PF03466 LysR substrate binding domain DKE48_RS15030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE48_RS15050 PF03466 LysR substrate binding domain DKE48_RS15050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE48_RS15060 PF00890 FAD binding domain DKE48_RS15060 PF14537 Cytochrome c3 DKE48_RS15075 PF00440 Bacterial regulatory proteins, tetR family DKE48_RS15075 PF17932 Tetracyclin repressor-like, C-terminal domain DKE48_RS15080 PF02515 CoA-transferase family III DKE48_RS15095 PF03466 LysR substrate binding domain DKE48_RS15095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE48_RS15100 PF00107 Zinc-binding dehydrogenase DKE48_RS15100 PF08240 Alcohol dehydrogenase GroES-like domain DKE48_RS15130 PF02445 Quinolinate synthetase A protein DKE48_RS15135 PF01960 ArgJ family DKE48_RS15140 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DKE48_RS15140 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DKE48_RS15145 PF00893 Small Multidrug Resistance protein DKE48_RS15175 PF00834 Ribulose-phosphate 3 epimerase family DKE48_RS15195 PF04445 Putative SAM-dependent methyltransferase DKE48_RS15200 PF00814 Glycoprotease family DKE48_RS15205 PF00132 Bacterial transferase hexapeptide (six repeats) DKE48_RS15210 PF00293 NUDIX domain DKE48_RS15255 PF00425 chorismate binding enzyme DKE48_RS15255 PF04715 Anthranilate synthase component I, N terminal region DKE48_RS15270 PF01634 ATP phosphoribosyltransferase DKE48_RS15285 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DKE48_RS15335 PF00795 Carbon-nitrogen hydrolase DKE48_RS15350 PF02566 OsmC-like protein DKE48_RS15380 PF02325 YGGT family DKE48_RS15385 PF14748 Pyrroline-5-carboxylate reductase dimerisation DKE48_RS15385 PF03807 NADP oxidoreductase coenzyme F420-dependent DKE48_RS15400 PF02541 Ppx/GppA phosphatase family DKE48_RS15405 PF00085 Thioredoxin DKE48_RS15410 PF07498 Rho termination factor, N-terminal domain DKE48_RS15410 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DKE48_RS15410 PF07497 Rho termination factor, RNA-binding domain DKE48_RS15425 PF00216 Bacterial DNA-binding protein DKE48_RS15435 PF01409 tRNA synthetases class II core domain (F) DKE48_RS15435 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DKE48_RS15455 PF00453 Ribosomal protein L20 DKE48_RS15460 PF01632 Ribosomal protein L35 DKE48_RS15465 PF07690 Major Facilitator Superfamily DKE48_RS15480 PF00707 Translation initiation factor IF-3, C-terminal domain DKE48_RS15480 PF05198 Translation initiation factor IF-3, N-terminal domain DKE48_RS15495 PF04751 Protein of unknown function (DUF615) DKE48_RS15500 PF00381 PTS HPr component phosphorylation site DKE48_RS15515 PF02548 Ketopantoate hydroxymethyltransferase DKE48_RS15535 PF03819 MazG nucleotide pyrophosphohydrolase domain DKE48_RS15560 PF00291 Pyridoxal-phosphate dependent enzyme DKE48_RS15565 PF00672 HAMP domain DKE48_RS15565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKE48_RS15565 PF00512 His Kinase A (phospho-acceptor) domain DKE48_RS15565 PF01627 Hpt domain DKE48_RS15565 PF00072 Response regulator receiver domain DKE48_RS15565 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DKE48_RS15570 PF00378 Enoyl-CoA hydratase/isomerase DKE48_RS15575 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DKE48_RS15575 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DKE48_RS15600 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch DKE48_RS15605 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DKE48_RS15605 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DKE48_RS15620 PF07690 Major Facilitator Superfamily DKE48_RS15635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE48_RS15635 PF03466 LysR substrate binding domain DKE48_RS15655 PF01026 TatD related DNase DKE48_RS15705 PF10369 Small subunit of acetolactate synthase DKE48_RS15725 PF00133 tRNA synthetases class I (I, L, M and V) DKE48_RS15725 PF13603 Leucyl-tRNA synthetase, Domain 2 DKE48_RS15725 PF08264 Anticodon-binding domain of tRNA DKE48_RS15725 PF09334 tRNA synthetases class I (M) DKE48_RS15730 PF00133 tRNA synthetases class I (I, L, M and V) DKE48_RS15730 PF13603 Leucyl-tRNA synthetase, Domain 2 DKE48_RS15730 PF09334 tRNA synthetases class I (M) DKE48_RS15730 PF08264 Anticodon-binding domain of tRNA DKE48_RS15735 PF13603 Leucyl-tRNA synthetase, Domain 2 DKE48_RS15735 PF00133 tRNA synthetases class I (I, L, M and V) DKE48_RS15735 PF08264 Anticodon-binding domain of tRNA DKE48_RS15735 PF09334 tRNA synthetases class I (M) DKE48_RS15740 PF13603 Leucyl-tRNA synthetase, Domain 2 DKE48_RS15740 PF09334 tRNA synthetases class I (M) DKE48_RS15740 PF00133 tRNA synthetases class I (I, L, M and V) DKE48_RS15740 PF08264 Anticodon-binding domain of tRNA DKE48_RS15745 PF08264 Anticodon-binding domain of tRNA DKE48_RS15745 PF00133 tRNA synthetases class I (I, L, M and V) DKE48_RS15745 PF09334 tRNA synthetases class I (M) DKE48_RS15745 PF13603 Leucyl-tRNA synthetase, Domain 2 DKE48_RS15770 PF02321 Outer membrane efflux protein DKE48_RS15785 PF00929 Exonuclease DKE48_RS15790 PF03193 RsgA GTPase DKE48_RS15800 PF00462 Glutaredoxin DKE48_RS15805 PF02556 Preprotein translocase subunit SecB DKE48_RS15820 PF02801 Beta-ketoacyl synthase, C-terminal domain DKE48_RS15820 PF00109 Beta-ketoacyl synthase, N-terminal domain DKE48_RS15875 PF00535 Glycosyl transferase family 2 DKE48_RS15900 PF01011 PQQ enzyme repeat DKE48_RS15900 PF13360 PQQ-like domain DKE48_RS15930 PF04055 Radical SAM superfamily DKE48_RS15935 PF00334 Nucleoside diphosphate kinase DKE48_RS15940 PF04384 Iron-sulphur cluster assembly DKE48_RS15945 PF01569 PAP2 superfamily DKE48_RS15975 PF00171 Aldehyde dehydrogenase family DKE48_RS15985 PF01202 Shikimate kinase DKE48_RS15990 PF02447 GntP family permease DKE48_RS15995 PF01081 KDPG and KHG aldolase DKE48_RS16035 PF00574 Clp protease DKE48_RS16050 PF13640 2OG-Fe(II) oxygenase superfamily DKE48_RS16050 PF18331 PKHD-type hydroxylase C-terminal domain DKE48_RS16055 PF08502 LeuA allosteric (dimerisation) domain DKE48_RS16055 PF00682 HMGL-like DKE48_RS16065 PF07021 Methionine biosynthesis protein MetW DKE48_RS16065 PF00561 alpha/beta hydrolase fold DKE48_RS16075 PF01725 Ham1 family DKE48_RS16090 PF02416 mttA/Hcf106 family DKE48_RS16130 PF00303 Thymidylate synthase DKE48_RS16135 PF00186 Dihydrofolate reductase DKE48_RS16155 PF02472 Biopolymer transport protein ExbD/TolR DKE48_RS16160 PF01618 MotA/TolQ/ExbB proton channel family DKE48_RS16170 PF00551 Formyl transferase DKE48_RS16170 PF01842 ACT domain DKE48_RS16185 PF00830 Ribosomal L28 family DKE48_RS16245 PF01638 HxlR-like helix-turn-helix DKE48_RS16255 PF04102 SlyX DKE48_RS16275 PF03279 Bacterial lipid A biosynthesis acyltransferase DKE48_RS16315 PF01416 tRNA pseudouridine synthase DKE48_RS16325 PF01176 Translation initiation factor 1A / IF-1 DKE48_RS16355 PF00330 Aconitase family (aconitate hydratase) DKE48_RS16365 PF03466 LysR substrate binding domain DKE48_RS16365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE48_RS16390 PF00293 NUDIX domain DKE48_RS16405 PF12706 Beta-lactamase superfamily domain DKE48_RS16410 PF03466 LysR substrate binding domain DKE48_RS16410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE48_RS16425 PF02798 Glutathione S-transferase, N-terminal domain DKE48_RS16430 PF08279 HTH domain DKE48_RS16430 PF13280 WYL domain DKE48_RS16500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DKE48_RS16500 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DKE48_RS16510 PF01197 Ribosomal protein L31 DKE48_RS16525 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DKE48_RS16545 PF03884 DNA gyrase inhibitor YacG DKE48_RS16550 PF00753 Metallo-beta-lactamase superfamily DKE48_RS16565 PF01177 Asp/Glu/Hydantoin racemase DKE48_RS16585 PF01206 Sulfurtransferase TusA DKE48_RS16590 PF00571 CBS domain DKE48_RS16590 PF03471 Transporter associated domain DKE48_RS16595 PF00795 Carbon-nitrogen hydrolase DKE48_RS16635 PF01430 Hsp33 protein DKE48_RS16655 PF01544 CorA-like Mg2+ transporter protein DKE48_RS16665 PF00312 Ribosomal protein S15 DKE48_RS16670 PF00144 Beta-lactamase DKE48_RS16710 PF01209 ubiE/COQ5 methyltransferase family DKE48_RS16725 PF01494 FAD binding domain DKE48_RS16750 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DKE48_RS16765 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) DKE48_RS16790 PF17384 RimP C-terminal SH3 domain DKE48_RS16790 PF02576 RimP N-terminal domain DKE48_RS16810 PF03840 Preprotein translocase SecG subunit DKE48_RS16820 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DKE48_RS16820 PF00437 Type II/IV secretion system protein DKE48_RS16830 PF06750 Bacterial Peptidase A24 N-terminal domain DKE48_RS16830 PF01478 Type IV leader peptidase family DKE48_RS16835 PF01121 Dephospho-CoA kinase DKE48_RS16845 PF00588 SpoU rRNA Methylase family DKE48_RS16845 PF08032 RNA 2'-O ribose methyltransferase substrate binding DKE48_RS16870 PF03652 Holliday junction resolvase DKE48_RS16900 PF02805 Metal binding domain of Ada DKE48_RS16900 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DKE48_RS16900 PF12833 Helix-turn-helix domain DKE48_RS16900 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DKE48_RS16905 PF01066 CDP-alcohol phosphatidyltransferase DKE48_RS16950 PF02803 Thiolase, C-terminal domain DKE48_RS16950 PF00108 Thiolase, N-terminal domain DKE48_RS16960 PF06821 Serine hydrolase DKE48_RS16965 PF00376 MerR family regulatory protein DKE48_RS16965 PF09278 MerR, DNA binding DKE48_RS17010 PF00561 alpha/beta hydrolase fold DKE48_RS17040 PF16320 Ribosomal protein L7/L12 dimerisation domain DKE48_RS17040 PF00542 Ribosomal protein L7/L12 C-terminal domain DKE48_RS17045 PF00466 Ribosomal protein L10 DKE48_RS17050 PF00687 Ribosomal protein L1p/L10e family DKE48_RS17055 PF03946 Ribosomal protein L11, N-terminal domain DKE48_RS17055 PF00298 Ribosomal protein L11, RNA binding domain DKE48_RS17060 PF02357 Transcription termination factor nusG DKE48_RS17060 PF00467 KOW motif DKE48_RS17105 PF13419 Haloacid dehalogenase-like hydrolase DKE48_RS17130 PF00816 H-NS histone family DKE48_RS17155 PF03900 Porphobilinogen deaminase, C-terminal domain DKE48_RS17155 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DKE48_RS17160 PF00072 Response regulator receiver domain DKE48_RS17160 PF04397 LytTr DNA-binding domain DKE48_RS17175 PF04362 Bacterial Fe(2+) trafficking DKE48_RS17180 PF01895 PhoU domain DKE48_RS17190 PF00892 EamA-like transporter family DKE48_RS17205 PF13667 ThiC-associated domain DKE48_RS17205 PF01964 Radical SAM ThiC family DKE48_RS17215 PF00149 Calcineurin-like phosphoesterase DKE48_RS17220 PF01258 Prokaryotic dksA/traR C4-type zinc finger DKE48_RS17255 PF02899 Phage integrase, N-terminal SAM-like domain DKE48_RS17255 PF00589 Phage integrase family DKE48_RS17270 PF00291 Pyridoxal-phosphate dependent enzyme DKE48_RS17275 PF00768 D-alanyl-D-alanine carboxypeptidase DKE48_RS17280 PF00196 Bacterial regulatory proteins, luxR family DKE48_RS17280 PF00072 Response regulator receiver domain DKE48_RS17285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKE48_RS17285 PF00512 His Kinase A (phospho-acceptor) domain DKE48_RS17295 PF03572 Peptidase family S41 DKE48_RS17295 PF00595 PDZ domain DKE48_RS17300 PF06415 BPG-independent PGAM N-terminus (iPGM_N) DKE48_RS17300 PF01676 Metalloenzyme superfamily DKE48_RS17305 PF03739 Lipopolysaccharide export system permease LptF/LptG DKE48_RS17350 PF03477 ATP cone domain DKE48_RS17405 PF00899 ThiF family DKE48_RS17405 PF14461 Prokaryotic E2 family B DKE48_RS17450 PF07670 Nucleoside recognition DKE48_RS17450 PF02421 Ferrous iron transport protein B DKE48_RS17450 PF07664 Ferrous iron transport protein B C terminus DKE48_RS17460 PF01545 Cation efflux family DKE48_RS17465 PF13411 MerR HTH family regulatory protein DKE48_RS17475 PF00394 Multicopper oxidase DKE48_RS17475 PF07731 Multicopper oxidase DKE48_RS17475 PF07732 Multicopper oxidase DKE48_RS17485 PF00072 Response regulator receiver domain DKE48_RS17485 PF00486 Transcriptional regulatory protein, C terminal DKE48_RS17490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKE48_RS17490 PF00672 HAMP domain DKE48_RS17490 PF00512 His Kinase A (phospho-acceptor) domain DKE48_RS17540 PF01078 Magnesium chelatase, subunit ChlI DKE48_RS17540 PF13335 Magnesium chelatase, subunit ChlI C-terminal DKE48_RS17550 PF00596 Class II Aldolase and Adducin N-terminal domain DKE48_RS17565 PF03573 outer membrane porin, OprD family DKE48_RS17595 PF07690 Major Facilitator Superfamily DKE48_RS17600 PF03458 UPF0126 domain DKE48_RS17605 PF02810 SEC-C motif DKE48_RS17615 PF03641 Possible lysine decarboxylase DKE48_RS17665 PF03358 NADPH-dependent FMN reductase DKE48_RS17680 PF00291 Pyridoxal-phosphate dependent enzyme DKE48_RS17765 PF00440 Bacterial regulatory proteins, tetR family DKE48_RS17790 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DKE48_RS17800 PF00231 ATP synthase DKE48_RS17805 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DKE48_RS17805 PF02874 ATP synthase alpha/beta family, beta-barrel domain DKE48_RS17805 PF00306 ATP synthase alpha/beta chain, C terminal domain DKE48_RS17820 PF00137 ATP synthase subunit C DKE48_RS17825 PF00119 ATP synthase A chain DKE48_RS17855 PF01810 LysE type translocator DKE48_RS17860 PF04261 Dyp-type peroxidase family DKE48_RS17890 PF05726 Pirin C-terminal cupin domain DKE48_RS17890 PF02678 Pirin DKE48_RS17900 PF01475 Ferric uptake regulator family DKE48_RS17910 PF13302 Acetyltransferase (GNAT) domain DKE48_RS17930 PF09335 SNARE associated Golgi protein DKE48_RS17955 PF01722 BolA-like protein DKE48_RS18000 PF00765 Autoinducer synthase DKE48_RS18010 PF00378 Enoyl-CoA hydratase/isomerase DKE48_RS18015 PF00378 Enoyl-CoA hydratase/isomerase DKE48_RS18025 PF13193 AMP-binding enzyme C-terminal domain DKE48_RS18025 PF00501 AMP-binding enzyme DKE48_RS18030 PF13193 AMP-binding enzyme C-terminal domain DKE48_RS18030 PF00501 AMP-binding enzyme DKE48_RS18040 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DKE48_RS18040 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DKE48_RS18065 PF01042 Endoribonuclease L-PSP DKE48_RS18070 PF00842 Alanine racemase, C-terminal domain DKE48_RS18070 PF01168 Alanine racemase, N-terminal domain DKE48_RS18080 PF01037 Lrp/AsnC ligand binding domain DKE48_RS18105 PF00849 RNA pseudouridylate synthase DKE48_RS18125 PF00440 Bacterial regulatory proteins, tetR family DKE48_RS18185 PF02801 Beta-ketoacyl synthase, C-terminal domain DKE48_RS18185 PF00109 Beta-ketoacyl synthase, N-terminal domain DKE48_RS18225 PF00285 Citrate synthase, C-terminal domain DKE48_RS18235 PF00392 Bacterial regulatory proteins, gntR family DKE48_RS18235 PF07729 FCD domain DKE48_RS18245 PF00155 Aminotransferase class I and II DKE48_RS18255 PF01070 FMN-dependent dehydrogenase DKE48_RS18260 PF07729 FCD domain DKE48_RS18260 PF00392 Bacterial regulatory proteins, gntR family DKE48_RS18285 PF16363 GDP-mannose 4,6 dehydratase DKE48_RS18300 PF00483 Nucleotidyl transferase DKE48_RS18310 PF00535 Glycosyl transferase family 2 DKE48_RS18330 PF01501 Glycosyl transferase family 8 DKE48_RS18330 PF00535 Glycosyl transferase family 2 DKE48_RS18340 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DKE48_RS18340 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DKE48_RS18340 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DKE48_RS18345 PF10531 SLBB domain DKE48_RS18345 PF18412 Outer-membrane lipoprotein Wza C-terminal domain DKE48_RS18345 PF02563 Polysaccharide biosynthesis/export protein DKE48_RS18360 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DKE48_RS18360 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DKE48_RS18380 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DKE48_RS18380 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DKE48_RS18395 PF03725 3' exoribonuclease family, domain 2 DKE48_RS18395 PF01138 3' exoribonuclease family, domain 1 DKE48_RS18410 PF00440 Bacterial regulatory proteins, tetR family DKE48_RS18415 PF00440 Bacterial regulatory proteins, tetR family DKE48_RS18415 PF08360 QacR-like protein, C-terminal region DKE48_RS18420 PF01323 DSBA-like thioredoxin domain DKE48_RS18430 PF13419 Haloacid dehalogenase-like hydrolase DKE48_RS18465 PF00296 Luciferase-like monooxygenase DKE48_RS18470 PF00528 Binding-protein-dependent transport system inner membrane component DKE48_RS18480 PF00440 Bacterial regulatory proteins, tetR family DKE48_RS18480 PF08362 YcdC-like protein, C-terminal region DKE48_RS18485 PF01048 Phosphorylase superfamily DKE48_RS18510 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DKE48_RS18550 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DKE48_RS18630 PF01225 Mur ligase family, catalytic domain DKE48_RS18630 PF02875 Mur ligase family, glutamate ligase domain DKE48_RS18630 PF08245 Mur ligase middle domain DKE48_RS18670 PF00156 Phosphoribosyl transferase domain DKE48_RS18680 PF13098 Thioredoxin-like domain DKE48_RS18680 PF10411 Disulfide bond isomerase protein N-terminus DKE48_RS18690 PF02583 Metal-sensitive transcriptional repressor DKE48_RS18705 PF01809 Putative membrane protein insertion efficiency factor DKE48_RS18710 PF00825 Ribonuclease P DKE48_RS18715 PF00468 Ribosomal protein L34 DKE48_RS18755 PF00239 Resolvase, N terminal domain DKE48_RS18755 PF02796 Helix-turn-helix domain of resolvase DKE48_RS18760 PF13610 DDE domain DKE48_RS18775 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DKE48_RS18775 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DKE48_RS18775 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DKE48_RS18775 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DKE48_RS18825 PF02661 Fic/DOC family DKE48_RS18855 PF11799 impB/mucB/samB family C-terminal domain DKE48_RS18855 PF13438 Domain of unknown function (DUF4113) DKE48_RS18855 PF00817 impB/mucB/samB family DKE48_RS18860 PF01726 LexA DNA binding domain DKE48_RS18860 PF00717 Peptidase S24-like DKE48_RS18885 PF13333 Integrase core domain DKE48_RS18885 PF13276 HTH-like domain DKE48_RS18885 PF00665 Integrase core domain DKE48_RS19025 PF01636 Phosphotransferase enzyme family DKE48_RS19050 PF01381 Helix-turn-helix DKE48_RS19130 PF13610 DDE domain DKE48_RS19145 PF13610 DDE domain DKE48_RS19225 PF13610 DDE domain DKE48_RS19235 PF02522 Aminoglycoside 3-N-acetyltransferase DKE48_RS19335 PF05973 Phage derived protein Gp49-like (DUF891) DKE48_RS19365 PF14765 Polyketide synthase dehydratase DKE48_RS19365 PF08659 KR domain DKE48_RS19365 PF00109 Beta-ketoacyl synthase, N-terminal domain DKE48_RS19365 PF02801 Beta-ketoacyl synthase, C-terminal domain DKE48_RS19365 PF08240 Alcohol dehydrogenase GroES-like domain DKE48_RS19365 PF16197 Ketoacyl-synthetase C-terminal extension DKE48_RS19365 PF00698 Acyl transferase domain DKE48_RS19365 PF00550 Phosphopantetheine attachment site DKE48_RS19385 PF00557 Metallopeptidase family M24 DKE48_RS19385 PF01321 Creatinase/Prolidase N-terminal domain DKE48_RS19400 PF02583 Metal-sensitive transcriptional repressor DKE48_RS19440 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DKE48_RS19460 PF00107 Zinc-binding dehydrogenase DKE48_RS19460 PF16884 N-terminal domain of oxidoreductase DKE48_RS19535 PF13180 PDZ domain DKE48_RS19540 PF01435 Peptidase family M48 DKE48_RS19585 PF00085 Thioredoxin DKE48_RS19620 PF12728 Helix-turn-helix domain DKE48_RS19735 PF01051 Initiator Replication protein