locus-tag	class	description
DKE48_RS00030	COG0586	Pfam SNARE associated Golgi protein
DKE48_RS00060	COG0596	Alpha beta hydrolase
DKE48_RS00110	COG0733	neurotransmitter:sodium symporter activity
DKE48_RS00205	COG0656	L-ascorbic acid biosynthetic process
DKE48_RS00270	COG2983	Belongs to the UPF0260 family
DKE48_RS00280	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
DKE48_RS00310	COG1335	isochorismatase
DKE48_RS00345	COG0625	glutathione transferase activity
DKE48_RS00355	COG1113	amino acid transport
DKE48_RS00375	COG2188	Transcriptional regulator
DKE48_RS00405	COG0010	Belongs to the arginase family
DKE48_RS00425	COG1280	lysine exporter protein (LysE YggA)
DKE48_RS00505	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
DKE48_RS00510	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
DKE48_RS00610	COG0436	Aminotransferase
DKE48_RS00615	COG2733	membrane
DKE48_RS00690	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DKE48_RS00715	COG2351	hydroxyisourate hydrolase activity
DKE48_RS00770	COG1393	Belongs to the ArsC family
DKE48_RS00775	COG0708	Exodeoxyribonuclease III
DKE48_RS00820	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
DKE48_RS00865	COG2119	membrane
DKE48_RS00870	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
DKE48_RS00870	COG0426	domain, Protein
DKE48_RS00920	COG1519	Transferase
DKE48_RS00925	COG1385	rRNA (uridine-N3-)-methyltransferase activity
DKE48_RS00930	COG0668	transmembrane transport
DKE48_RS00950	COG1335	isochorismatase
DKE48_RS00955	COG1522	sequence-specific DNA binding
DKE48_RS00985	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
DKE48_RS00990	COG3162	membrane
DKE48_RS01025	COG1309	transcriptional regulator
DKE48_RS01045	COG0352	thiamine-phosphate diphosphorylase activity
DKE48_RS01045	COG0351	phosphomethylpyrimidine kinase
DKE48_RS01045	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
DKE48_RS01055	COG2814	Major facilitator Superfamily
DKE48_RS01070	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
DKE48_RS01160	COG0667	Aldo Keto reductase
DKE48_RS01195	COG1733	regulation of RNA biosynthetic process
DKE48_RS01465	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
DKE48_RS01525	COG4221	oxidoreductase activity
DKE48_RS01660	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
DKE48_RS01675	COG2226	methyltransferase
DKE48_RS01730	COG0493	'glutamate synthase
DKE48_RS01740	COG1704	LemA family
DKE48_RS01755	COG4969	Belongs to the N-Me-Phe pilin family
DKE48_RS01765	COG3307	-O-antigen
DKE48_RS01865	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
DKE48_RS01885	COG5380	lipid catabolic process
DKE48_RS01920	COG0277	FAD linked oxidase domain protein
DKE48_RS01935	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
DKE48_RS01940	COG2249	NAD(P)H dehydrogenase (quinone) activity
DKE48_RS01955	COG1289	transmembrane transporter activity
DKE48_RS02020	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
DKE48_RS02070	COG0583	DNA-binding transcription factor activity
DKE48_RS02120	COG1983	PspC domain protein
DKE48_RS02170	COG1127	ABC transporter
DKE48_RS02175	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
DKE48_RS02205	COG0494	nUDIX hydrolase
DKE48_RS02210	COG1040	competence protein
DKE48_RS02235	COG1946	Acyl-CoA thioesterase
DKE48_RS02255	COG1959	2 iron, 2 sulfur cluster binding
DKE48_RS02260	COG1017	nitric oxide dioxygenase activity
DKE48_RS02260	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
DKE48_RS02290	COG0088	Forms part of the polypeptide exit tunnel
DKE48_RS02430	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
DKE48_RS02460	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
DKE48_RS02515	COG0179	Fumarylacetoacetate (FAA) hydrolase
DKE48_RS02575	COG0741	lytic transglycosylase activity
DKE48_RS02575	COG1196	nuclear chromosome segregation
DKE48_RS02575	COG0739	heme binding
DKE48_RS02615	COG1183	phosphatidylcholine synthase activity
DKE48_RS02740	COG2969	positive regulation of protein catabolic process
DKE48_RS02750	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
DKE48_RS02765	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
DKE48_RS02875	COG1607	acyl-coa hydrolase
DKE48_RS02910	COG2350	Protein conserved in bacteria
DKE48_RS02940	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
DKE48_RS02950	COG1862	Preprotein translocase
DKE48_RS03000	COG2194	sulfuric ester hydrolase activity
DKE48_RS03020	COG0438	transferase activity, transferring glycosyl groups
DKE48_RS03090	COG1960	acyl-CoA dehydrogenase activity
DKE48_RS03110	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
DKE48_RS03180	COG0285	dihydrofolate synthase activity
DKE48_RS03215	COG0477	Major facilitator Superfamily
DKE48_RS03255	COG2207	Transcriptional regulator
DKE48_RS03295	COG0183	Belongs to the thiolase family
DKE48_RS03310	COG1690	Belongs to the RtcB family
DKE48_RS03315	COG0833	amino acid
DKE48_RS03395	COG0354	folic acid binding
DKE48_RS03410	COG2824	Alkylphosphonate utilization operon protein PhnA
DKE48_RS03455	COG0840	transmembrane signaling receptor activity
DKE48_RS03485	COG2832	Protein of unknown function (DUF454)
DKE48_RS03490	COG1376	ErfK ybiS ycfS ynhG family protein
DKE48_RS03620	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
DKE48_RS03625	COG1077	Cell shape determining protein MreB Mrl
DKE48_RS03630	COG1792	Involved in formation and maintenance of cell shape
DKE48_RS03640	COG0424	maF-like protein
DKE48_RS03655	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
DKE48_RS03675	COG2249	NAD(P)H dehydrogenase (quinone) activity
DKE48_RS03735	COG2816	NAD+ diphosphatase activity
DKE48_RS03750	COG0142	geranyltranstransferase activity
DKE48_RS03755	COG2315	Protein conserved in bacteria
DKE48_RS03770	COG1752	Esterase of the alpha-beta hydrolase superfamily
DKE48_RS03800	COG0745	RESPONSE REGULATOR receiver
DKE48_RS03870	COG0393	Putative heavy-metal-binding
DKE48_RS03875	COG0393	Putative heavy-metal-binding
DKE48_RS03890	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DKE48_RS03945	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
DKE48_RS03980	COG2921	Belongs to the UPF0250 family
DKE48_RS04020	COG2009	succinate dehydrogenase
DKE48_RS04025	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
DKE48_RS04030	COG1053	succinate dehydrogenase
DKE48_RS04080	COG2354	Protein conserved in bacteria
DKE48_RS04085	COG2321	neutral zinc metallopeptidase
DKE48_RS04170	COG0589	response to stress
DKE48_RS04180	COG0251	oxidation-reduction process
DKE48_RS04445	COG1309	transcriptional regulator
DKE48_RS04465	COG1028	Short-chain dehydrogenase reductase Sdr
DKE48_RS04475	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DKE48_RS04485	COG0778	Nitroreductase
DKE48_RS04510	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
DKE48_RS04525	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
DKE48_RS04545	COG1113	amino acid transport
DKE48_RS04570	COG1280	lysine exporter protein (LysE YggA)
DKE48_RS04670	COG1136	(ABC) transporter
DKE48_RS04695	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
DKE48_RS04705	COG0628	permease
DKE48_RS04780	COG0824	Thioesterase
DKE48_RS04815	COG2814	Major facilitator Superfamily
DKE48_RS04835	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
DKE48_RS04840	COG1024	Enoyl-CoA hydratase
DKE48_RS04880	COG0602	queuosine metabolic process
DKE48_RS04890	COG4625	pathogenesis
DKE48_RS04895	COG0583	DNA-binding transcription factor activity
DKE48_RS04900	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
DKE48_RS04905	COG4208	sulfate ABC transporter
DKE48_RS04910	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
DKE48_RS04985	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
DKE48_RS05000	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
DKE48_RS05055	COG0556	nucleotide-excision repair
DKE48_RS05165	COG1252	NADH dehydrogenase
DKE48_RS05170	COG1686	Belongs to the peptidase S11 family
DKE48_RS05185	COG1187	pseudouridine synthase activity
DKE48_RS05260	COG0352	thiamine-phosphate diphosphorylase activity
DKE48_RS05410	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
DKE48_RS05415	COG1686	Belongs to the peptidase S11 family
DKE48_RS05455	COG0583	DNA-binding transcription factor activity
DKE48_RS05510	COG2879	small protein
DKE48_RS05575	COG1741	Belongs to the pirin family
DKE48_RS05640	COG2840	Smr protein MutS2
DKE48_RS05665	COG0308	aminopeptidase N
DKE48_RS05670	COG0512	Glutamine amidotransferase of anthranilate synthase
DKE48_RS05730	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
DKE48_RS05735	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
DKE48_RS05760	COG1385	rRNA (uridine-N3-)-methyltransferase activity
DKE48_RS05765	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
DKE48_RS05810	COG2223	nitrite transmembrane transporter activity
DKE48_RS05890	COG1131	(ABC) transporter
DKE48_RS05960	COG3645	SOS response
DKE48_RS06240	COG4160	amino acid transport
DKE48_RS06255	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
DKE48_RS06280	COG1720	tRNA m6t6A37 methyltransferase activity
DKE48_RS06295	COG3111	PFAM Bacterial OB fold (BOF) protein
DKE48_RS06330	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
DKE48_RS06335	COG3139	Protein of unknown function (DUF1315)
DKE48_RS06340	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
DKE48_RS06355	COG1960	acyl-CoA dehydrogenase activity
DKE48_RS06385	COG1262	PFAM Formylglycine-generating sulfatase enzyme
DKE48_RS06440	COG0513	Belongs to the DEAD box helicase family
DKE48_RS06450	COG0778	Nitroreductase
DKE48_RS06510	COG1610	YqeY-like protein
DKE48_RS06610	COG1859	Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase
DKE48_RS06720	COG3243	poly(R)-hydroxyalkanoic acid synthase
DKE48_RS06795	COG1073	alpha beta
DKE48_RS06815	COG2207	Transcriptional regulator
DKE48_RS06835	COG2995	paraquat-inducible protein a
DKE48_RS06855	COG2351	hydroxyisourate hydrolase activity
DKE48_RS06915	COG0745	RESPONSE REGULATOR receiver
DKE48_RS06985	COG0151	Belongs to the GarS family
DKE48_RS06995	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
DKE48_RS07035	COG1305	Transglutaminase-like
DKE48_RS07050	COG0305	Participates in initiation and elongation during chromosome replication
DKE48_RS07075	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
DKE48_RS07245	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
DKE48_RS07255	COG0745	RESPONSE REGULATOR receiver
DKE48_RS07360	COG0802	atpase or kinase
DKE48_RS07375	COG1923	regulation of RNA biosynthetic process
DKE48_RS07410	COG0518	GMP synthase (glutamine-hydrolyzing) activity
DKE48_RS07410	COG0519	Catalyzes the synthesis of GMP from XMP
DKE48_RS07420	COG4303	Ethanolamine ammonia lyase large subunit
DKE48_RS07425	COG0531	amino acid
DKE48_RS07445	COG1454	alcohol dehydrogenase
DKE48_RS07460	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
DKE48_RS07525	COG1605	Chorismate mutase
DKE48_RS07595	COG0668	transmembrane transport
DKE48_RS07675	COG3135	benzoate transporter
DKE48_RS07680	COG1522	sequence-specific DNA binding
DKE48_RS07695	COG0583	DNA-binding transcription factor activity
DKE48_RS07715	COG2030	dehydratase
DKE48_RS07785	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
DKE48_RS07865	COG0511	ligase activity, forming carbon-carbon bonds
DKE48_RS07885	COG0745	RESPONSE REGULATOR receiver
DKE48_RS07975	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
DKE48_RS07980	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
DKE48_RS08040	COG2204	response regulator
DKE48_RS08075	COG0575	Belongs to the CDS family
DKE48_RS08125	COG2137	regulation of response to DNA damage stimulus
DKE48_RS08140	COG1011	Hydrolase
DKE48_RS08170	COG1113	amino acid transport
DKE48_RS08195	COG0659	secondary active sulfate transmembrane transporter activity
DKE48_RS08290	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
DKE48_RS08295	COG0517	IMP dehydrogenase activity
DKE48_RS08295	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
DKE48_RS08345	COG4890	Cyd operon protein YbgT
DKE48_RS08395	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
DKE48_RS08435	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
DKE48_RS08440	COG0542	response to heat
DKE48_RS08505	COG2323	membrane
DKE48_RS08515	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
DKE48_RS08525	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
DKE48_RS08530	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
DKE48_RS08555	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
DKE48_RS08565	COG3485	protocatechuate 3,4-dioxygenase
DKE48_RS08575	COG3420	alginic acid biosynthetic process
DKE48_RS08645	COG2814	Major facilitator Superfamily
DKE48_RS08675	COG4638	Rieske (2fe-2S)
DKE48_RS08695	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
DKE48_RS08730	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
DKE48_RS08745	COG4829	muconolactone delta-isomerase
DKE48_RS08810	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
DKE48_RS08835	COG1309	transcriptional regulator
DKE48_RS09015	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
DKE48_RS09125	COG4221	oxidoreductase activity
DKE48_RS09190	COG3539	Fimbrial protein
DKE48_RS09340	COG3251	PFAM MbtH domain protein
DKE48_RS09420	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
DKE48_RS09450	COG1028	Short-chain dehydrogenase reductase Sdr
DKE48_RS09515	COG0583	DNA-binding transcription factor activity
DKE48_RS09585	COG2188	Transcriptional regulator
DKE48_RS09625	COG3453	Protein conserved in bacteria
DKE48_RS09625	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DKE48_RS09635	COG3781	membrane
DKE48_RS09640	COG1063	alcohol dehydrogenase
DKE48_RS09665	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
DKE48_RS09710	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
DKE48_RS09850	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
DKE48_RS09875	COG0730	response to heat
DKE48_RS09955	COG1960	acyl-CoA dehydrogenase activity
DKE48_RS10005	COG0316	Belongs to the HesB IscA family
DKE48_RS10060	COG0702	epimerase
DKE48_RS10100	COG0601	transmembrane transport
DKE48_RS10180	COG2431	L-lysine efflux transmembrane transporter activity
DKE48_RS10195	COG0776	regulation of translation
DKE48_RS10285	COG1132	(ABC) transporter
DKE48_RS10305	COG1192	Involved in chromosome partitioning
DKE48_RS10335	COG0191	fructose-bisphosphate aldolase activity
DKE48_RS10355	COG0424	maF-like protein
DKE48_RS10360	COG2850	peptidyl-arginine hydroxylation
DKE48_RS10370	COG0640	Transcriptional regulator
DKE48_RS10385	COG3122	Protein conserved in bacteria
DKE48_RS10410	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
DKE48_RS10430	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
DKE48_RS10445	COG3698	Phosphodiester glycosidase
DKE48_RS10455	COG2353	YceI-like domain
DKE48_RS10530	COG3539	Fimbrial protein
DKE48_RS10565	COG0697	spore germination
DKE48_RS10675	COG1464	Belongs to the NlpA lipoprotein family
DKE48_RS10680	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
DKE48_RS10765	COG0436	Aminotransferase
DKE48_RS10805	COG3634	alkyl hydroperoxide reductase activity
DKE48_RS10830	COG0640	Transcriptional regulator
DKE48_RS10845	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
DKE48_RS10885	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
DKE48_RS10900	COG0477	Major facilitator Superfamily
DKE48_RS10920	COG1271	oxidase subunit
DKE48_RS10925	COG1294	oxidase, subunit
DKE48_RS10935	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DKE48_RS10955	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
DKE48_RS10990	COG2814	Major facilitator Superfamily
DKE48_RS11010	COG1346	cytolysis
DKE48_RS11035	COG0583	DNA-binding transcription factor activity
DKE48_RS11090	COG1126	abc transporter atp-binding protein
DKE48_RS11165	COG1028	Short-chain dehydrogenase reductase Sdr
DKE48_RS11215	COG0583	DNA-binding transcription factor activity
DKE48_RS11245	COG1960	acyl-CoA dehydrogenase activity
DKE48_RS11255	COG1024	Enoyl-CoA hydratase
DKE48_RS11260	COG4770	biotin carboxylase activity
DKE48_RS11315	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
DKE48_RS11335	COG1024	Enoyl-CoA hydratase
DKE48_RS11360	COG2814	Major facilitator Superfamily
DKE48_RS11400	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
DKE48_RS11445	COG0583	DNA-binding transcription factor activity
DKE48_RS11450	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
DKE48_RS11465	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
DKE48_RS11475	COG1012	belongs to the aldehyde dehydrogenase family
DKE48_RS11510	COG3038	cytochrome b561
DKE48_RS11520	COG1733	regulation of RNA biosynthetic process
DKE48_RS11595	COG3460	Phenylacetate-CoA oxygenase
DKE48_RS11600	COG3396	Phenylacetate-CoA oxygenase
DKE48_RS11680	COG0789	Transcriptional regulator
DKE48_RS11690	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
DKE48_RS11710	COG0590	tRNA wobble adenosine to inosine editing
DKE48_RS11805	COG0864	Transcriptional regulator
DKE48_RS11815	COG1733	regulation of RNA biosynthetic process
DKE48_RS11840	COG1063	alcohol dehydrogenase
DKE48_RS11940	COG3220	belongs to the UPF0276 family
DKE48_RS11955	COG1028	Short-chain dehydrogenase reductase Sdr
DKE48_RS11970	COG2076	Multidrug Resistance protein
DKE48_RS11985	COG3713	MltA-interacting MipA family protein
DKE48_RS12105	COG1278	Cold shock
DKE48_RS12125	COG1522	sequence-specific DNA binding
DKE48_RS12210	COG0653	protein targeting
DKE48_RS12315	COG1028	Short-chain dehydrogenase reductase Sdr
DKE48_RS12320	COG1028	Short-chain dehydrogenase reductase Sdr
DKE48_RS12325	COG1028	Short-chain dehydrogenase reductase Sdr
DKE48_RS12340	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
DKE48_RS12385	COG1137	ATPase activity
DKE48_RS12390	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
DKE48_RS12400	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
DKE48_RS12490	COG1280	lysine exporter protein (LysE YggA)
DKE48_RS12520	COG1570	exodeoxyribonuclease VII activity
DKE48_RS12610	COG0583	DNA-binding transcription factor activity
DKE48_RS12620	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
DKE48_RS12640	COG2814	Major facilitator Superfamily
DKE48_RS12680	COG3634	alkyl hydroperoxide reductase activity
DKE48_RS12710	COG3328	transposase activity
DKE48_RS12775	COG1765	OsmC-like protein
DKE48_RS12800	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
DKE48_RS12845	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
DKE48_RS12870	COG1741	Belongs to the pirin family
DKE48_RS12895	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
DKE48_RS12945	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
DKE48_RS12960	COG2814	Major facilitator Superfamily
DKE48_RS13030	COG1113	amino acid transport
DKE48_RS13070	COG0531	amino acid
DKE48_RS13170	COG5001	Diguanylate cyclase
DKE48_RS13170	COG3706	GGDEF domain
DKE48_RS13170	COG2203	Gaf domain
DKE48_RS13170	COG4251	negative regulation of phosphorylation
DKE48_RS13210	COG4172	Belongs to the ABC transporter superfamily
DKE48_RS13215	COG4239	(ABC) transporter, permease
DKE48_RS13300	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DKE48_RS13345	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
DKE48_RS13395	COG3384	dioxygenase
DKE48_RS13465	COG0830	nickel cation binding
DKE48_RS13520	COG1253	flavin adenine dinucleotide binding
DKE48_RS13575	COG1773	rubredoxin
DKE48_RS13665	COG1262	PFAM Formylglycine-generating sulfatase enzyme
DKE48_RS13685	COG0306	phosphate transporter
DKE48_RS13720	COG2207	Transcriptional regulator
DKE48_RS13720	COG0662	Cupin 2, conserved barrel domain protein
DKE48_RS13725	COG2066	Belongs to the glutaminase family
DKE48_RS13760	COG1028	Short-chain dehydrogenase reductase Sdr
DKE48_RS13790	COG1028	Short-chain dehydrogenase reductase Sdr
DKE48_RS13810	COG1414	Transcriptional regulator
DKE48_RS13835	COG1024	Enoyl-CoA hydratase
DKE48_RS13885	COG1607	acyl-coa hydrolase
DKE48_RS13955	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
DKE48_RS14075	COG0405	Gamma-glutamyltransferase
DKE48_RS14090	COG2050	protein possibly involved in aromatic compounds catabolism
DKE48_RS14155	COG0735	belongs to the Fur family
DKE48_RS14160	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
DKE48_RS14215	COG2885	chlorophyll binding
DKE48_RS14270	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
DKE48_RS14280	COG0456	acetyltransferase
DKE48_RS14325	COG1981	membrane
DKE48_RS14340	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
DKE48_RS14340	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
DKE48_RS14365	COG1012	belongs to the aldehyde dehydrogenase family
DKE48_RS14385	COG0473	3-isopropylmalate dehydrogenase activity
DKE48_RS14410	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
DKE48_RS14460	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
DKE48_RS14490	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
DKE48_RS14520	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
DKE48_RS14530	COG0352	thiamine-phosphate diphosphorylase activity
DKE48_RS14530	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
DKE48_RS14530	COG0351	phosphomethylpyrimidine kinase
DKE48_RS14535	COG1652	LysM domain
DKE48_RS14560	COG1399	metal-binding, possibly nucleic acid-binding protein
DKE48_RS14565	COG3101	peptidyl-lysine hydroxylation
DKE48_RS14570	COG0009	L-threonylcarbamoyladenylate synthase
DKE48_RS14655	COG0730	response to heat
DKE48_RS14735	COG0489	protein tyrosine kinase activity
DKE48_RS14825	COG0583	DNA-binding transcription factor activity
DKE48_RS14850	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
DKE48_RS14855	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
DKE48_RS14925	COG0745	RESPONSE REGULATOR receiver
DKE48_RS15000	COG1309	transcriptional regulator
DKE48_RS15010	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
DKE48_RS15030	COG0583	DNA-binding transcription factor activity
DKE48_RS15050	COG0583	DNA-binding transcription factor activity
DKE48_RS15060	COG1053	succinate dehydrogenase
DKE48_RS15075	COG1309	transcriptional regulator
DKE48_RS15080	COG1804	L-carnitine dehydratase bile acid-inducible protein F
DKE48_RS15095	COG0583	DNA-binding transcription factor activity
DKE48_RS15100	COG1063	alcohol dehydrogenase
DKE48_RS15130	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
DKE48_RS15135	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
DKE48_RS15140	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
DKE48_RS15175	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
DKE48_RS15200	COG1214	PFAM Peptidase M22, glycoprotease
DKE48_RS15255	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
DKE48_RS15270	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
DKE48_RS15335	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
DKE48_RS15350	COG1764	response to oxidative stress
DKE48_RS15400	COG0248	Ppx GppA phosphatase
DKE48_RS15460	COG0291	Belongs to the bacterial ribosomal protein bL35 family
DKE48_RS15495	COG3028	Belongs to the UPF0307 family
DKE48_RS15500	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
DKE48_RS15530	COG1555	photosystem II stabilization
DKE48_RS15535	COG3956	TIGRFAM MazG family protein
DKE48_RS15565	COG0784	Response regulator, receiver
DKE48_RS15565	COG5002	protein histidine kinase activity
DKE48_RS15565	COG2205	protein histidine kinase activity
DKE48_RS15570	COG1024	Enoyl-CoA hydratase
DKE48_RS15575	COG2084	Dehydrogenase
DKE48_RS15620	COG2814	Major facilitator Superfamily
DKE48_RS15655	COG0084	hydrolase, TatD family'
DKE48_RS15705	COG0440	acetolactate synthase activity
DKE48_RS15770	COG1538	Outer membrane efflux protein
DKE48_RS15785	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
DKE48_RS15790	COG1162	GTPase activity
DKE48_RS15800	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
DKE48_RS15820	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
DKE48_RS15825	COG1028	Short-chain dehydrogenase reductase Sdr
DKE48_RS15875	COG1216	Glycosyl transferase, family 2
DKE48_RS15900	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
DKE48_RS15985	COG3265	gluconokinase activity
DKE48_RS15995	COG0800	Aldolase
DKE48_RS16035	COG0740	serine-type endopeptidase activity
DKE48_RS16055	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
DKE48_RS16065	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
DKE48_RS16065	COG2813	Specifically methylates the guanine in position
DKE48_RS16170	COG0788	formyltetrahydrofolate deformylase activity
DKE48_RS16245	COG1733	regulation of RNA biosynthetic process
DKE48_RS16255	COG2900	Belongs to the SlyX family
DKE48_RS16275	COG1560	Kdo2-lipid A biosynthetic process
DKE48_RS16410	COG0583	DNA-binding transcription factor activity
DKE48_RS16425	COG0625	glutathione transferase activity
DKE48_RS16430	COG2378	regulation of single-species biofilm formation
DKE48_RS16545	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
DKE48_RS16550	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DKE48_RS16565	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
DKE48_RS16590	COG4535	Mg2 and Co2 transporter CorC
DKE48_RS16635	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
DKE48_RS16650	COG0789	Transcriptional regulator
DKE48_RS16655	COG0598	Magnesium transport protein CorA
DKE48_RS16670	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
DKE48_RS16710	COG2226	methyltransferase
DKE48_RS16750	COG1006	Multisubunit Na H antiporter MnhC subunit
DKE48_RS16765	COG2212	antiporter activity
DKE48_RS16835	COG0237	dephospho-CoA kinase activity
DKE48_RS16845	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DKE48_RS16870	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
DKE48_RS16900	COG2169	Transcriptional regulator
DKE48_RS16900	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
DKE48_RS16905	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
DKE48_RS16960	COG3545	Serine hydrolase
DKE48_RS17010	COG0596	Alpha beta hydrolase
DKE48_RS17105	COG0546	phosphoglycolate phosphatase activity
DKE48_RS17155	COG0181	hydroxymethylbilane synthase activity
DKE48_RS17190	COG0697	spore germination
DKE48_RS17215	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
DKE48_RS17220	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
DKE48_RS17255	COG4974	Belongs to the 'phage' integrase family
DKE48_RS17270	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
DKE48_RS17280	COG2197	response regulator
DKE48_RS17295	COG0793	Belongs to the peptidase S41A family
DKE48_RS17300	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
DKE48_RS17305	COG0795	lipopolysaccharide-transporting ATPase activity
DKE48_RS17405	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
DKE48_RS17475	COG2132	Multicopper oxidase
DKE48_RS17490	COG2205	protein histidine kinase activity
DKE48_RS17540	COG0606	chelatase, subunit chli
DKE48_RS17550	COG0235	Class ii aldolase
DKE48_RS17595	COG0477	Major facilitator Superfamily
DKE48_RS17600	COG2860	membrane
DKE48_RS17665	COG0655	NAD(P)H dehydrogenase (quinone) activity
DKE48_RS17680	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
DKE48_RS17765	COG1309	transcriptional regulator
DKE48_RS17790	COG0355	proton-transporting ATP synthase activity, rotational mechanism
DKE48_RS17855	COG1280	lysine exporter protein (LysE YggA)
DKE48_RS17860	COG2837	iron assimilation
DKE48_RS17900	COG0735	belongs to the Fur family
DKE48_RS17910	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DKE48_RS17930	COG0586	Pfam SNARE associated Golgi protein
DKE48_RS17955	COG0271	Belongs to the BolA IbaG family
DKE48_RS18000	COG3916	Acyl-homoserine-lactone synthase
DKE48_RS18010	COG1024	Enoyl-CoA hydratase
DKE48_RS18015	COG1024	Enoyl-CoA hydratase
DKE48_RS18030	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
DKE48_RS18065	COG0251	oxidation-reduction process
DKE48_RS18105	COG0564	pseudouridine synthase activity
DKE48_RS18125	COG1309	transcriptional regulator
DKE48_RS18235	COG1802	Transcriptional regulator
DKE48_RS18245	COG1448	Aminotransferase
DKE48_RS18260	COG2186	Transcriptional regulator
DKE48_RS18285	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
DKE48_RS18300	COG1210	Utp--glucose-1-phosphate uridylyltransferase
DKE48_RS18310	COG1216	Glycosyl transferase, family 2
DKE48_RS18330	COG1216	Glycosyl transferase, family 2
DKE48_RS18330	COG1442	glycosyl transferase family 8
DKE48_RS18340	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
DKE48_RS18345	COG1596	polysaccharide export
DKE48_RS18430	COG0546	phosphoglycolate phosphatase activity
DKE48_RS18465	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DKE48_RS18470	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DKE48_RS18480	COG1309	transcriptional regulator
DKE48_RS18485	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
DKE48_RS18510	COG1047	Peptidyl-prolyl cis-trans
DKE48_RS18550	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
DKE48_RS18630	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
DKE48_RS18680	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
DKE48_RS18775	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
DKE48_RS18825	COG2184	nucleotidyltransferase activity
DKE48_RS18860	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
DKE48_RS18970	COG2801	Transposase and inactivated derivatives
DKE48_RS19015	COG2801	Transposase and inactivated derivatives
DKE48_RS19025	COG3173	Aminoglycoside phosphotransferase
DKE48_RS19050	COG3636	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
DKE48_RS19240	COG1660	Displays ATPase and GTPase activities
DKE48_RS19335	COG4683	PFAM Phage derived protein Gp49-like (DUF891)
DKE48_RS19365	COG3321	synthase
DKE48_RS19365	COG0604	alcohol dehydrogenase
DKE48_RS19440	COG1902	pentaerythritol trinitrate reductase activity
DKE48_RS19460	COG2130	NADP-dependent
DKE48_RS19535	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DKE48_RS19585	COG3118	belongs to the thioredoxin family