locus-tag	class	description
DKP84_RS00010	COG0592	DNA-directed DNA polymerase activity
DKP84_RS00065	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
DKP84_RS00070	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
DKP84_RS00150	COG2233	PERMEase
DKP84_RS00200	COG2814	Major facilitator Superfamily
DKP84_RS00205	COG0656	L-ascorbic acid biosynthetic process
DKP84_RS00235	COG2818	Glycosylase
DKP84_RS00250	COG1194	a g-specific adenine glycosylase
DKP84_RS00265	COG5487	UPF0391 membrane protein
DKP84_RS00270	COG2983	Belongs to the UPF0260 family
DKP84_RS00275	COG2133	pyrroloquinoline quinone binding
DKP84_RS00305	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
DKP84_RS00375	COG2188	Transcriptional regulator
DKP84_RS00440	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
DKP84_RS00450	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
DKP84_RS00560	COG0534	Mate efflux family protein
DKP84_RS00565	COG0436	Aminotransferase
DKP84_RS00665	COG3150	esterase
DKP84_RS00675	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
DKP84_RS00700	COG2351	hydroxyisourate hydrolase activity
DKP84_RS00755	COG0708	Exodeoxyribonuclease III
DKP84_RS00785	COG0189	ligase activity
DKP84_RS00805	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
DKP84_RS00815	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
DKP84_RS00850	COG2119	membrane
DKP84_RS00860	COG0426	domain, Protein
DKP84_RS00860	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
DKP84_RS00925	COG0668	transmembrane transport
DKP84_RS00935	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
DKP84_RS00945	COG1522	sequence-specific DNA binding
DKP84_RS00975	COG3162	membrane
DKP84_RS00990	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
DKP84_RS01010	COG1309	transcriptional regulator
DKP84_RS01035	COG0789	Transcriptional regulator
DKP84_RS01050	COG2814	Major facilitator Superfamily
DKP84_RS01090	COG1012	belongs to the aldehyde dehydrogenase family
DKP84_RS01100	COG1335	isochorismatase
DKP84_RS01165	COG0583	DNA-binding transcription factor activity
DKP84_RS01230	COG1733	regulation of RNA biosynthetic process
DKP84_RS01260	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
DKP84_RS01265	COG2207	Transcriptional regulator
DKP84_RS01405	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
DKP84_RS01420	COG2329	Antibiotic biosynthesis monooxygenase
DKP84_RS01425	COG0697	spore germination
DKP84_RS01455	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
DKP84_RS01515	COG4221	oxidoreductase activity
DKP84_RS01890	COG1704	LemA family
DKP84_RS01895	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
DKP84_RS01945	COG0194	GDP metabolic process
DKP84_RS01995	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
DKP84_RS02005	COG0335	large ribosomal subunit rRNA binding
DKP84_RS02020	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
DKP84_RS02045	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
DKP84_RS02060	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
DKP84_RS02100	COG1192	Involved in chromosome partitioning
DKP84_RS02130	COG0833	amino acid
DKP84_RS02140	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
DKP84_RS02240	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
DKP84_RS02240	COG0517	IMP dehydrogenase activity
DKP84_RS02240	COG0617	tRNA 3'-terminal CCA addition
DKP84_RS02245	COG1983	PspC domain protein
DKP84_RS02305	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
DKP84_RS02315	COG2854	intermembrane phospholipid transfer
DKP84_RS02325	COG0598	Magnesium transport protein CorA
DKP84_RS02335	COG0494	nUDIX hydrolase
DKP84_RS02360	COG2937	Belongs to the GPAT DAPAT family
DKP84_RS02390	COG1017	nitric oxide dioxygenase activity
DKP84_RS02390	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
DKP84_RS02420	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
DKP84_RS02425	COG0088	Forms part of the polypeptide exit tunnel
DKP84_RS02560	COG1960	acyl-CoA dehydrogenase activity
DKP84_RS02565	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
DKP84_RS02595	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
DKP84_RS02600	COG0339	signal peptide processing
DKP84_RS02655	COG0179	Fumarylacetoacetate (FAA) hydrolase
DKP84_RS02695	COG1702	phosphate starvation-inducible protein PhoH
DKP84_RS02735	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
DKP84_RS02740	COG1183	phosphatidylcholine synthase activity
DKP84_RS02790	COG1309	transcriptional regulator
DKP84_RS02850	COG2969	positive regulation of protein catabolic process
DKP84_RS02860	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
DKP84_RS02870	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
DKP84_RS02875	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
DKP84_RS02880	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
DKP84_RS02925	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
DKP84_RS02925	COG2885	chlorophyll binding
DKP84_RS02930	COG2199	diguanylate cyclase activity
DKP84_RS03000	COG1607	acyl-coa hydrolase
DKP84_RS03050	COG3781	membrane
DKP84_RS03060	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
DKP84_RS03065	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
DKP84_RS03075	COG1862	Preprotein translocase
DKP84_RS03095	COG5002	protein histidine kinase activity
DKP84_RS03195	COG1960	acyl-CoA dehydrogenase activity
DKP84_RS03245	COG2096	Adenosyltransferase
DKP84_RS03345	COG2153	protein acetylation
DKP84_RS03370	COG2207	Transcriptional regulator
DKP84_RS03390	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
DKP84_RS03420	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
DKP84_RS03420	COG2885	chlorophyll binding
DKP84_RS03425	COG1690	Belongs to the RtcB family
DKP84_RS03430	COG0833	amino acid
DKP84_RS03440	COG2233	PERMEase
DKP84_RS03445	COG1217	gtp-binding protein TYPA
DKP84_RS03460	COG4580	involved in the transport of maltose and maltodextrins
DKP84_RS03475	COG2094	Belongs to the DNA glycosylase MPG family
DKP84_RS03545	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DKP84_RS03560	COG3189	MarR family transcriptional regulator
DKP84_RS03565	COG2824	Alkylphosphonate utilization operon protein PhnA
DKP84_RS03570	COG3422	double-strand break repair
DKP84_RS03640	COG5510	response to toxic substance
DKP84_RS03650	COG2832	Protein of unknown function (DUF454)
DKP84_RS03705	COG1289	transmembrane transporter activity
DKP84_RS03730	COG1115	amino acid carrier protein
DKP84_RS03740	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
DKP84_RS03780	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
DKP84_RS03785	COG1077	Cell shape determining protein MreB Mrl
DKP84_RS03790	COG1792	Involved in formation and maintenance of cell shape
DKP84_RS03795	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
DKP84_RS03800	COG0424	maF-like protein
DKP84_RS03805	COG0424	maF-like protein
DKP84_RS03810	COG1530	ribonuclease E activity
DKP84_RS03820	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
DKP84_RS03840	COG2249	NAD(P)H dehydrogenase (quinone) activity
DKP84_RS03900	COG3046	protein related to deoxyribodipyrimidine photolyase
DKP84_RS03905	COG2816	NAD+ diphosphatase activity
DKP84_RS03940	COG1752	Esterase of the alpha-beta hydrolase superfamily
DKP84_RS03970	COG0745	RESPONSE REGULATOR receiver
DKP84_RS03975	COG0642	Histidine kinase
DKP84_RS03985	COG0004	ammonium transporteR
DKP84_RS03990	COG0583	DNA-binding transcription factor activity
DKP84_RS04020	COG1028	Short-chain dehydrogenase reductase Sdr
DKP84_RS04035	COG0393	Putative heavy-metal-binding
DKP84_RS04100	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
DKP84_RS04100	COG1648	precorrin-2 dehydrogenase activity
DKP84_RS04105	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
DKP84_RS04160	COG2921	Belongs to the UPF0250 family
DKP84_RS04200	COG2009	succinate dehydrogenase
DKP84_RS04205	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
DKP84_RS04210	COG1053	succinate dehydrogenase
DKP84_RS04215	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
DKP84_RS04260	COG2321	neutral zinc metallopeptidase
DKP84_RS04295	COG0589	response to stress
DKP84_RS04300	COG0110	maltose O-acetyltransferase activity
DKP84_RS04315	COG0505	Belongs to the CarA family
DKP84_RS04590	COG1538	Outer membrane efflux protein
DKP84_RS04625	COG0778	Nitroreductase
DKP84_RS04630	COG0300	oxidoreductase activity
DKP84_RS04650	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
DKP84_RS04680	COG1113	amino acid transport
DKP84_RS04705	COG1280	lysine exporter protein (LysE YggA)
DKP84_RS04775	COG1136	(ABC) transporter
DKP84_RS04795	COG0596	Alpha beta hydrolase
DKP84_RS04810	COG0628	permease
DKP84_RS04845	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DKP84_RS04865	COG0823	Involved in the tonB-independent uptake of proteins
DKP84_RS04890	COG1473	amidohydrolase
DKP84_RS04915	COG2814	Major facilitator Superfamily
DKP84_RS04920	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
DKP84_RS04945	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
DKP84_RS04960	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
DKP84_RS04975	COG4625	pathogenesis
DKP84_RS04980	COG0583	DNA-binding transcription factor activity
DKP84_RS04985	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
DKP84_RS04990	COG4208	sulfate ABC transporter
DKP84_RS04995	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
DKP84_RS05005	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
DKP84_RS05010	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
DKP84_RS05035	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DKP84_RS05045	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DKP84_RS05050	COG0481	GTPase activity
DKP84_RS05065	COG0571	ribonuclease III activity
DKP84_RS05085	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
DKP84_RS05125	COG0436	Aminotransferase
DKP84_RS05200	COG2070	2-Nitropropane dioxygenase
DKP84_RS05230	COG1215	transferase activity, transferring glycosyl groups
DKP84_RS05255	COG1252	NADH dehydrogenase
DKP84_RS05310	COG0612	Peptidase, M16
DKP84_RS05340	COG0352	thiamine-phosphate diphosphorylase activity
DKP84_RS05395	COG0076	glutamate decarboxylase activity
DKP84_RS05420	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
DKP84_RS05425	COG0573	inorganic phosphate transmembrane transporter activity
DKP84_RS05440	COG0616	signal peptide processing
DKP84_RS05475	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
DKP84_RS05480	COG1686	Belongs to the peptidase S11 family
DKP84_RS05505	COG0583	DNA-binding transcription factor activity
DKP84_RS05550	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
DKP84_RS05560	COG2879	small protein
DKP84_RS05585	COG1012	belongs to the aldehyde dehydrogenase family
DKP84_RS05590	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
DKP84_RS05645	COG4221	oxidoreductase activity
DKP84_RS05705	COG1741	Belongs to the pirin family
DKP84_RS05725	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DKP84_RS05735	COG4604	ABC transporter, ATP-binding protein
DKP84_RS05740	COG4607	ABC-type enterochelin transport system periplasmic component
DKP84_RS05765	COG3433	isochorismatase activity
DKP84_RS05765	COG1535	isochorismatase
DKP84_RS05790	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
DKP84_RS05815	COG3739	integral membrane protein
DKP84_RS05835	COG0302	gtp cyclohydrolase
DKP84_RS05870	COG0512	Glutamine amidotransferase of anthranilate synthase
DKP84_RS06265	COG0174	glutamine synthetase
DKP84_RS06275	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
DKP84_RS06310	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
DKP84_RS06315	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
DKP84_RS06320	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DKP84_RS06370	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
DKP84_RS06395	COG0024	Methionine aminopeptidase
DKP84_RS06440	COG2951	lytic endotransglycosylase activity
DKP84_RS06525	COG4215	(ABC) transporter
DKP84_RS06545	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
DKP84_RS06570	COG1720	tRNA m6t6A37 methyltransferase activity
DKP84_RS06615	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
DKP84_RS06620	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
DKP84_RS06625	COG3139	Protein of unknown function (DUF1315)
DKP84_RS06630	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
DKP84_RS06640	COG1301	dicarboxylic acid transport
DKP84_RS06645	COG1960	acyl-CoA dehydrogenase activity
DKP84_RS06665	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
DKP84_RS06675	COG2195	Cleaves the N-terminal amino acid of tripeptides
DKP84_RS06705	COG2363	Small membrane protein
DKP84_RS06735	COG0778	Nitroreductase
DKP84_RS06765	COG1286	toxin biosynthetic process
DKP84_RS06795	COG1610	YqeY-like protein
DKP84_RS06935	COG2351	hydroxyisourate hydrolase activity
DKP84_RS07025	COG2175	clavaminate synthase activity
DKP84_RS07030	COG3246	L-lysine catabolic process to acetate
DKP84_RS07085	COG2814	Major facilitator Superfamily
DKP84_RS07125	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DKP84_RS07145	COG0151	Belongs to the GarS family
DKP84_RS07155	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
DKP84_RS07220	COG1305	Transglutaminase-like
DKP84_RS07230	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
DKP84_RS07235	COG0305	Participates in initiation and elongation during chromosome replication
DKP84_RS07260	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
DKP84_RS07270	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
DKP84_RS07310	COG3658	cytochrome
DKP84_RS07335	COG0583	DNA-binding transcription factor activity
DKP84_RS07350	COG2890	protein-(glutamine-N5) methyltransferase activity
DKP84_RS07375	COG1960	acyl-CoA dehydrogenase activity
DKP84_RS07395	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
DKP84_RS07410	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
DKP84_RS07425	COG0745	RESPONSE REGULATOR receiver
DKP84_RS07430	COG0174	glutamine synthetase
DKP84_RS07460	COG2706	6-phosphogluconolactonase activity
DKP84_RS07505	COG0583	DNA-binding transcription factor activity
DKP84_RS07540	COG0802	atpase or kinase
DKP84_RS07555	COG1923	regulation of RNA biosynthetic process
DKP84_RS07595	COG4302	ethanolamine ammonia-lyase activity
DKP84_RS07810	COG0589	response to stress
DKP84_RS07835	COG1522	sequence-specific DNA binding
DKP84_RS07880	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
DKP84_RS07920	COG0824	Thioesterase
DKP84_RS07940	COG1335	isochorismatase
DKP84_RS07985	COG0069	glutamate synthase activity
DKP84_RS08025	COG0511	ligase activity, forming carbon-carbon bonds
DKP84_RS08075	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
DKP84_RS08075	COG1116	anion transmembrane transporter activity
DKP84_RS08080	COG0745	RESPONSE REGULATOR receiver
DKP84_RS08115	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
DKP84_RS08130	COG0521	Mo-molybdopterin cofactor biosynthetic process
DKP84_RS08130	COG0315	cyclic pyranopterin monophosphate synthase activity
DKP84_RS08145	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DKP84_RS08175	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
DKP84_RS08275	COG0575	Belongs to the CDS family
DKP84_RS08310	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
DKP84_RS08340	COG1011	Hydrolase
DKP84_RS08365	COG1113	amino acid transport
DKP84_RS08385	COG0659	secondary active sulfate transmembrane transporter activity
DKP84_RS08465	COG0583	DNA-binding transcription factor activity
DKP84_RS08475	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
DKP84_RS08480	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
DKP84_RS08535	COG4890	Cyd operon protein YbgT
DKP84_RS08555	COG1585	Membrane protein implicated in regulation of membrane protease activity
DKP84_RS08620	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
DKP84_RS08650	COG1902	pentaerythritol trinitrate reductase activity
DKP84_RS08650	COG0446	pyridine nucleotide-disulphide oxidoreductase
DKP84_RS08695	COG2323	membrane
DKP84_RS08710	COG4773	Receptor
DKP84_RS08735	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
DKP84_RS08745	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
DKP84_RS08755	COG2271	Major facilitator Superfamily
DKP84_RS08760	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
DKP84_RS08770	COG3485	protocatechuate 3,4-dioxygenase
DKP84_RS08925	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
DKP84_RS08930	COG0183	Belongs to the thiolase family
DKP84_RS08935	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
DKP84_RS08940	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
DKP84_RS08950	COG4829	muconolactone delta-isomerase
DKP84_RS08970	COG2186	Transcriptional regulator
DKP84_RS08995	COG2351	hydroxyisourate hydrolase activity
DKP84_RS09000	COG2233	PERMEase
DKP84_RS09010	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DKP84_RS09015	COG2186	Transcriptional regulator
DKP84_RS09045	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DKP84_RS09085	COG3659	wide pore channel activity
DKP84_RS09090	COG1309	transcriptional regulator
DKP84_RS09110	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
DKP84_RS09145	COG1902	pentaerythritol trinitrate reductase activity
DKP84_RS09145	COG0446	pyridine nucleotide-disulphide oxidoreductase
DKP84_RS09155	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
DKP84_RS09190	COG4638	Rieske (2fe-2S)
DKP84_RS09195	COG1522	sequence-specific DNA binding
DKP84_RS09215	COG0477	Major facilitator Superfamily
DKP84_RS09225	COG1309	transcriptional regulator
DKP84_RS09245	COG1309	transcriptional regulator
DKP84_RS09270	COG1902	pentaerythritol trinitrate reductase activity
DKP84_RS09305	COG1403	HNH endonuclease
DKP84_RS09310	COG0494	nUDIX hydrolase
DKP84_RS09370	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
DKP84_RS09375	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
DKP84_RS09445	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DKP84_RS09455	COG2084	Dehydrogenase
DKP84_RS09470	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DKP84_RS09495	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
DKP84_RS09595	COG1073	alpha beta
DKP84_RS09605	COG1028	Short-chain dehydrogenase reductase Sdr
DKP84_RS09620	COG2207	Transcriptional regulator
DKP84_RS09715	COG1859	Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase
DKP84_RS09735	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
DKP84_RS09785	COG3250	beta-galactosidase activity
DKP84_RS09790	COG3250	beta-galactosidase activity
DKP84_RS09800	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
DKP84_RS09900	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
DKP84_RS09915	COG0667	Aldo Keto reductase
DKP84_RS10005	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DKP84_RS10010	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
DKP84_RS10015	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DKP84_RS10020	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DKP84_RS10050	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DKP84_RS10075	COG1132	(ABC) transporter
DKP84_RS10155	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
DKP84_RS10205	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DKP84_RS10280	COG4149	molybdate abc transporter
DKP84_RS10285	COG0725	ABC transporter, periplasmic molybdate-binding protein
DKP84_RS10305	COG0543	2 iron, 2 sulfur cluster binding
DKP84_RS10305	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
DKP84_RS10320	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
DKP84_RS10350	COG2207	Transcriptional regulator
DKP84_RS10360	COG2610	gluconate transmembrane transporter activity
DKP84_RS10375	COG0583	DNA-binding transcription factor activity
DKP84_RS10390	COG2031	fatty acid transporter
DKP84_RS10450	COG2207	Transcriptional regulator
DKP84_RS10450	COG3708	Transcriptional regulator
DKP84_RS10485	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DKP84_RS10485	COG3453	Protein conserved in bacteria
DKP84_RS10510	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DKP84_RS10515	COG0508	dehydrogenase complex catalyzes the overall conversion of
DKP84_RS10520	COG0022	dehydrogenase e1 component
DKP84_RS10530	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
DKP84_RS10545	COG3706	GGDEF domain
DKP84_RS10575	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
DKP84_RS10605	COG0583	DNA-binding transcription factor activity
DKP84_RS10610	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
DKP84_RS10680	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
DKP84_RS10710	COG0730	response to heat
DKP84_RS10735	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
DKP84_RS10780	COG1960	acyl-CoA dehydrogenase activity
DKP84_RS10785	COG1960	acyl-CoA dehydrogenase activity
DKP84_RS10800	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
DKP84_RS10805	COG0776	regulation of translation
DKP84_RS10830	COG0822	iron-sulfur transferase activity
DKP84_RS10985	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
DKP84_RS10990	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
DKP84_RS11025	COG0776	regulation of translation
DKP84_RS11110	COG1663	tetraacyldisaccharide 4'-kinase activity
DKP84_RS11130	COG1475	DNA binding
DKP84_RS11135	COG1192	Involved in chromosome partitioning
DKP84_RS11150	COG3178	'Phosphotransferase
DKP84_RS11200	COG0640	Transcriptional regulator
DKP84_RS11210	COG3619	membrane
DKP84_RS11245	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
DKP84_RS11300	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
DKP84_RS11455	COG1522	sequence-specific DNA binding
DKP84_RS11465	COG1126	abc transporter atp-binding protein
DKP84_RS11470	COG0765	amino acid transport
DKP84_RS11475	COG0765	amino acid transport
DKP84_RS11505	COG1464	Belongs to the NlpA lipoprotein family
DKP84_RS11520	COG2011	ABC-type metal ion transport system permease component
DKP84_RS11525	COG0012	GTP binding
DKP84_RS11665	COG0640	Transcriptional regulator
DKP84_RS11690	COG0583	DNA-binding transcription factor activity
DKP84_RS11715	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DKP84_RS11720	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
DKP84_RS11760	COG1271	oxidase subunit
DKP84_RS11765	COG1294	oxidase, subunit
DKP84_RS11820	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
DKP84_RS11845	COG1346	cytolysis
DKP84_RS11925	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DKP84_RS11930	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DKP84_RS11945	COG0765	amino acid transport
DKP84_RS11990	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
DKP84_RS12010	COG1028	Short-chain dehydrogenase reductase Sdr
DKP84_RS12100	COG1309	transcriptional regulator
DKP84_RS12115	COG1024	Enoyl-CoA hydratase
DKP84_RS12170	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
DKP84_RS12175	COG2814	Major facilitator Superfamily
DKP84_RS12180	COG1960	acyl-CoA dehydrogenase activity
DKP84_RS12185	COG1024	Enoyl-CoA hydratase
DKP84_RS12195	COG1250	3-hydroxyacyl-CoA dehydrogenase
DKP84_RS12220	COG1024	Enoyl-CoA hydratase
DKP84_RS12250	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
DKP84_RS12300	COG0583	DNA-binding transcription factor activity
DKP84_RS12340	COG2050	protein possibly involved in aromatic compounds catabolism
DKP84_RS12370	COG1024	Enoyl-CoA hydratase
DKP84_RS12390	COG3396	Phenylacetate-CoA oxygenase
DKP84_RS12395	COG3460	Phenylacetate-CoA oxygenase
DKP84_RS12410	COG1760	l-serine dehydratase
DKP84_RS12415	COG0531	amino acid
DKP84_RS12445	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DKP84_RS12490	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
DKP84_RS12510	COG2807	transmembrane transport
DKP84_RS12515	COG0590	tRNA wobble adenosine to inosine editing
DKP84_RS12745	COG1733	regulation of RNA biosynthetic process
DKP84_RS12770	COG1063	alcohol dehydrogenase
DKP84_RS12810	COG0038	chloride channel
DKP84_RS12860	COG3220	belongs to the UPF0276 family
DKP84_RS12920	COG0702	epimerase
DKP84_RS12925	COG1733	regulation of RNA biosynthetic process
DKP84_RS12950	COG1051	belongs to the nudix hydrolase family
DKP84_RS12990	COG3038	cytochrome b561
DKP84_RS13065	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
DKP84_RS13080	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
DKP84_RS13095	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
DKP84_RS13105	COG4122	O-methyltransferase activity
DKP84_RS13135	COG1538	Outer membrane efflux protein
DKP84_RS13140	COG1137	ATPase activity
DKP84_RS13145	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
DKP84_RS13210	COG0668	transmembrane transport
DKP84_RS13255	COG1309	transcriptional regulator
DKP84_RS13315	COG1560	Kdo2-lipid A biosynthetic process
DKP84_RS13320	COG1280	lysine exporter protein (LysE YggA)
DKP84_RS13355	COG1570	exodeoxyribonuclease VII activity
DKP84_RS13440	COG2871	sodium ion transport
DKP84_RS13460	COG4638	Rieske (2fe-2S)
DKP84_RS13465	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
DKP84_RS13470	COG0543	2 iron, 2 sulfur cluster binding
DKP84_RS13470	COG0633	Ferredoxin
DKP84_RS13475	COG1028	Short-chain dehydrogenase reductase Sdr
DKP84_RS13525	COG3634	alkyl hydroperoxide reductase activity
DKP84_RS13545	COG0220	tRNA (guanine-N7-)-methyltransferase activity
DKP84_RS13555	COG0625	glutathione transferase activity
DKP84_RS13645	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
DKP84_RS13680	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
DKP84_RS13710	COG1741	Belongs to the pirin family
DKP84_RS13730	COG2072	flavoprotein involved in K transport
DKP84_RS13735	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
DKP84_RS13740	COG0583	DNA-binding transcription factor activity
DKP84_RS13835	COG2814	Major facilitator Superfamily
DKP84_RS13885	COG2186	Transcriptional regulator
DKP84_RS13890	COG2186	Transcriptional regulator
DKP84_RS13905	COG4948	Mandelate Racemase Muconate Lactonizing
DKP84_RS13940	COG1113	amino acid transport
DKP84_RS13960	COG1012	belongs to the aldehyde dehydrogenase family
DKP84_RS14045	COG2207	Transcriptional regulator
DKP84_RS14120	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DKP84_RS14130	COG0745	RESPONSE REGULATOR receiver
DKP84_RS14170	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
DKP84_RS14170	COG0475	glutathione-regulated potassium exporter activity
DKP84_RS14185	COG1902	pentaerythritol trinitrate reductase activity
DKP84_RS14190	COG3118	belongs to the thioredoxin family
DKP84_RS14200	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
DKP84_RS14345	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
DKP84_RS14350	COG1960	acyl-CoA dehydrogenase activity
DKP84_RS14370	COG3971	2-oxopent-4-enoate hydratase activity
DKP84_RS14380	COG3384	dioxygenase
DKP84_RS14395	COG0179	Fumarylacetoacetate (FAA) hydrolase
DKP84_RS14640	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
DKP84_RS14720	COG0583	DNA-binding transcription factor activity
DKP84_RS14735	COG0789	Transcriptional regulator
DKP84_RS14750	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DKP84_RS14820	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
DKP84_RS14830	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
DKP84_RS14910	COG3015	lipoprotein NlpE involved in copper resistance
DKP84_RS14980	COG1773	rubredoxin
DKP84_RS14995	COG0583	DNA-binding transcription factor activity
DKP84_RS15095	COG0306	phosphate transporter
DKP84_RS15110	COG3959	Transketolase, thiamine diphosphate binding domain
DKP84_RS15115	COG2271	Major facilitator Superfamily
DKP84_RS15120	COG1028	Short-chain dehydrogenase reductase Sdr
DKP84_RS15125	COG0583	DNA-binding transcription factor activity
DKP84_RS15145	COG2223	nitrite transmembrane transporter activity
DKP84_RS15150	COG2207	Transcriptional regulator
DKP84_RS15160	COG0242	peptide deformylase activity
DKP84_RS15165	COG0477	Major facilitator Superfamily
DKP84_RS15190	COG1028	Short-chain dehydrogenase reductase Sdr
DKP84_RS15195	COG2267	carboxylic ester hydrolase activity
DKP84_RS15220	COG1028	Short-chain dehydrogenase reductase Sdr
DKP84_RS15245	COG1414	Transcriptional regulator
DKP84_RS15310	COG1607	acyl-coa hydrolase
DKP84_RS15330	COG1309	transcriptional regulator
DKP84_RS15355	COG2040	homocysteine
DKP84_RS15415	COG1595	DNA-templated transcription, initiation
DKP84_RS15485	COG0405	Gamma-glutamyltransferase
DKP84_RS15490	COG2814	Major facilitator Superfamily
DKP84_RS15515	COG1090	epimerase
DKP84_RS15535	COG0420	3'-5' exonuclease activity
DKP84_RS15570	COG0735	belongs to the Fur family
DKP84_RS15575	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
DKP84_RS15600	COG0121	glutamine amidotransferase
DKP84_RS15630	COG2885	chlorophyll binding
DKP84_RS15650	COG2894	cell division
DKP84_RS15680	COG0492	ferredoxin-NADP+ reductase activity
DKP84_RS15685	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
DKP84_RS15710	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
DKP84_RS15715	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
DKP84_RS15740	COG1981	membrane
DKP84_RS15775	COG4638	Rieske (2fe-2S)
DKP84_RS15780	COG0657	acetylesterase activity
DKP84_RS15795	COG0583	DNA-binding transcription factor activity
DKP84_RS15815	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
DKP84_RS15935	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
DKP84_RS15935	COG0352	thiamine-phosphate diphosphorylase activity
DKP84_RS15935	COG0351	phosphomethylpyrimidine kinase
DKP84_RS15965	COG1399	metal-binding, possibly nucleic acid-binding protein
DKP84_RS15970	COG3101	peptidyl-lysine hydroxylation
DKP84_RS15975	COG0009	L-threonylcarbamoyladenylate synthase
DKP84_RS15985	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
DKP84_RS16000	COG4106	trans-aconitate 2-methyltransferase activity
DKP84_RS16015	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
DKP84_RS16015	COG0596	Alpha beta hydrolase
DKP84_RS16015	COG2226	methyltransferase
DKP84_RS16060	COG0730	response to heat
DKP84_RS16140	COG0489	protein tyrosine kinase activity
DKP84_RS16190	COG2515	1-aminocyclopropane-1-carboxylate deaminase
DKP84_RS16225	COG0583	DNA-binding transcription factor activity
DKP84_RS16245	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
DKP84_RS16250	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
DKP84_RS16280	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
DKP84_RS16305	COG2199	diguanylate cyclase activity
DKP84_RS16320	COG0745	RESPONSE REGULATOR receiver
DKP84_RS16335	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DKP84_RS16395	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
DKP84_RS16465	COG0583	DNA-binding transcription factor activity
DKP84_RS16490	COG1053	succinate dehydrogenase
DKP84_RS16525	COG1960	acyl-CoA dehydrogenase activity
DKP84_RS16530	COG0583	DNA-binding transcription factor activity
DKP84_RS16535	COG1063	alcohol dehydrogenase
DKP84_RS16570	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
DKP84_RS16575	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
DKP84_RS16605	COG0561	phosphatase activity
DKP84_RS16610	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
DKP84_RS16635	COG1214	PFAM Peptidase M22, glycoprotease
DKP84_RS16700	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
DKP84_RS16765	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
DKP84_RS16775	COG1846	Transcriptional regulator
DKP84_RS16780	COG1764	response to oxidative stress
DKP84_RS16830	COG0248	Ppx GppA phosphatase
DKP84_RS16890	COG0291	Belongs to the bacterial ribosomal protein bL35 family
DKP84_RS16905	COG1238	metal cluster binding
DKP84_RS16935	COG3028	Belongs to the UPF0307 family
DKP84_RS16940	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
DKP84_RS16970	COG1555	photosystem II stabilization
DKP84_RS16975	COG3956	TIGRFAM MazG family protein
DKP84_RS17000	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
DKP84_RS17060	COG2814	Major facilitator Superfamily
DKP84_RS17090	COG0492	ferredoxin-NADP+ reductase activity
DKP84_RS17110	COG0640	Transcriptional regulator
DKP84_RS17270	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
DKP84_RS17305	COG0084	hydrolase, TatD family'
DKP84_RS17340	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
DKP84_RS17345	COG0440	acetolactate synthase activity
DKP84_RS17370	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DKP84_RS17375	COG1136	(ABC) transporter
DKP84_RS17375	COG0577	efflux transmembrane transporter activity
DKP84_RS17400	COG1162	GTPase activity
DKP84_RS17410	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
DKP84_RS17450	COG1426	Protein conserved in bacteria
DKP84_RS17485	COG0793	Belongs to the peptidase S41A family
DKP84_RS17515	COG3265	gluconokinase activity
DKP84_RS17525	COG0800	Aldolase
DKP84_RS17540	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
DKP84_RS17550	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
DKP84_RS17550	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
DKP84_RS17600	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
DKP84_RS17600	COG2813	Specifically methylates the guanine in position
DKP84_RS17700	COG0788	formyltetrahydrofolate deformylase activity
DKP84_RS17745	COG0724	RNA recognition motif
DKP84_RS17780	COG0604	alcohol dehydrogenase
DKP84_RS17785	COG2900	Belongs to the SlyX family
DKP84_RS17805	COG1560	Kdo2-lipid A biosynthetic process
DKP84_RS17815	COG1301	dicarboxylic acid transport
DKP84_RS17870	COG0473	3-isopropylmalate dehydrogenase activity
DKP84_RS17895	COG0583	DNA-binding transcription factor activity
DKP84_RS17935	COG0583	DNA-binding transcription factor activity
DKP84_RS17955	COG2378	regulation of single-species biofilm formation
DKP84_RS17970	COG1530	ribonuclease E activity
DKP84_RS17995	COG1028	Short-chain dehydrogenase reductase Sdr
DKP84_RS18000	COG0635	Involved in the biosynthesis of porphyrin-containing compound
DKP84_RS18065	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
DKP84_RS18070	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DKP84_RS18085	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
DKP84_RS18095	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
DKP84_RS18095	COG0644	oxidoreductase
DKP84_RS18110	COG4535	Mg2 and Co2 transporter CorC
DKP84_RS18150	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
DKP84_RS18165	COG0789	Transcriptional regulator
DKP84_RS18170	COG0598	Magnesium transport protein CorA
DKP84_RS18220	COG2226	methyltransferase
DKP84_RS18235	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DKP84_RS18270	COG1006	Multisubunit Na H antiporter MnhC subunit
DKP84_RS18285	COG2212	antiporter activity
DKP84_RS18290	COG1320	monovalent cation:proton antiporter activity
DKP84_RS18295	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
DKP84_RS18305	COG0195	Participates in both transcription termination and antitermination
DKP84_RS18355	COG0237	dephospho-CoA kinase activity
DKP84_RS18365	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DKP84_RS18380	COG0497	DNA recombination
DKP84_RS18390	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
DKP84_RS18430	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
DKP84_RS18535	COG2056	Na+-H+ antiporter family
DKP84_RS18605	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
DKP84_RS18635	COG0546	phosphoglycolate phosphatase activity
DKP84_RS18640	COG1716	ATPase activity
DKP84_RS18685	COG0181	hydroxymethylbilane synthase activity
DKP84_RS18755	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
DKP84_RS18765	COG0772	Belongs to the SEDS family
DKP84_RS18790	COG4974	Belongs to the 'phage' integrase family
DKP84_RS18835	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
DKP84_RS18890	COG0004	ammonium transporteR
DKP84_RS18965	COG0606	chelatase, subunit chli
DKP84_RS18975	COG0235	Class ii aldolase
DKP84_RS19000	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
DKP84_RS19015	COG0318	PFAM AMP-dependent synthetase and ligase
DKP84_RS19030	COG2860	membrane
DKP84_RS19050	COG2814	Major facilitator Superfamily
DKP84_RS19070	COG0745	RESPONSE REGULATOR receiver
DKP84_RS19135	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
DKP84_RS19205	COG0758	DNA mediated transformation
DKP84_RS19220	COG1309	transcriptional regulator
DKP84_RS19245	COG0355	proton-transporting ATP synthase activity, rotational mechanism
DKP84_RS19250	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
DKP84_RS19260	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
DKP84_RS19300	COG1121	(ABC) transporter
DKP84_RS19305	COG1108	ABC-type Mn2 Zn2 transport systems permease components
DKP84_RS19315	COG2837	iron assimilation
DKP84_RS19380	COG2259	Doxx family
DKP84_RS19410	COG0271	Belongs to the BolA IbaG family
DKP84_RS19460	COG3321	synthase
DKP84_RS19460	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
DKP84_RS19460	COG0318	PFAM AMP-dependent synthetase and ligase
DKP84_RS19460	COG1028	Short-chain dehydrogenase reductase Sdr
DKP84_RS19460	COG0300	oxidoreductase activity
DKP84_RS19485	COG3916	Acyl-homoserine-lactone synthase
DKP84_RS19495	COG1024	Enoyl-CoA hydratase
DKP84_RS19500	COG1024	Enoyl-CoA hydratase
DKP84_RS19510	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
DKP84_RS19535	COG1113	amino acid transport
DKP84_RS19580	COG0564	pseudouridine synthase activity
DKP84_RS19660	COG1051	belongs to the nudix hydrolase family
DKP84_RS19705	COG1448	Aminotransferase
DKP84_RS19710	COG0277	FAD linked oxidase domain protein
DKP84_RS19765	COG1210	Utp--glucose-1-phosphate uridylyltransferase
DKP84_RS19770	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
DKP84_RS19775	COG1216	Glycosyl transferase, family 2
DKP84_RS19785	COG1215	transferase activity, transferring glycosyl groups
DKP84_RS19805	COG1216	Glycosyl transferase, family 2
DKP84_RS19805	COG0463	Glycosyl transferase, family 2
DKP84_RS19835	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
DKP84_RS19930	COG0546	phosphoglycolate phosphatase activity
DKP84_RS19935	COG1028	Short-chain dehydrogenase reductase Sdr
DKP84_RS19950	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
DKP84_RS19950	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
DKP84_RS19980	COG1309	transcriptional regulator
DKP84_RS20010	COG1047	Peptidyl-prolyl cis-trans
DKP84_RS20050	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
DKP84_RS20055	COG0657	acetylesterase activity
DKP84_RS20115	COG2951	lytic endotransglycosylase activity
DKP84_RS20135	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
DKP84_RS20190	COG1230	cation diffusion facilitator family transporter