locus-tag class description DKE42_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain DKE42_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain DKE42_RS00010 PF02767 DNA polymerase III beta subunit, central domain DKE42_RS00055 PF01521 Iron-sulphur cluster biosynthesis DKE42_RS00065 PF03702 Anhydro-N-acetylmuramic acid kinase DKE42_RS00070 PF00579 tRNA synthetases class I (W and Y) DKE42_RS00105 PF02798 Glutathione S-transferase, N-terminal domain DKE42_RS00115 PF00209 Sodium:neurotransmitter symporter family DKE42_RS00130 PF02911 Formyl transferase, C-terminal domain DKE42_RS00130 PF00551 Formyl transferase DKE42_RS00135 PF00920 Dehydratase family DKE42_RS00155 PF00860 Permease family DKE42_RS00160 PF00311 Phosphoenolpyruvate carboxylase DKE42_RS00195 PF01113 Dihydrodipicolinate reductase, N-terminus DKE42_RS00195 PF05173 Dihydrodipicolinate reductase, C-terminus DKE42_RS00205 PF07690 Major Facilitator Superfamily DKE42_RS00210 PF00248 Aldo/keto reductase family DKE42_RS00230 PF00392 Bacterial regulatory proteins, gntR family DKE42_RS00230 PF00155 Aminotransferase class I and II DKE42_RS00240 PF03352 Methyladenine glycosylase DKE42_RS00255 PF00730 HhH-GPD superfamily base excision DNA repair protein DKE42_RS00255 PF10576 Iron-sulfur binding domain of endonuclease III DKE42_RS00255 PF00633 Helix-hairpin-helix motif DKE42_RS00255 PF14815 NUDIX domain DKE42_RS00270 PF07043 Protein of unknown function (DUF1328) DKE42_RS00275 PF03692 Putative zinc- or iron-chelating domain DKE42_RS00280 PF07995 Glucose / Sorbosone dehydrogenase DKE42_RS00285 PF12002 MgsA AAA+ ATPase C terminal DKE42_RS00285 PF16193 AAA C-terminal domain DKE42_RS00285 PF00004 ATPase family associated with various cellular activities (AAA) DKE42_RS00290 PF01226 Formate/nitrite transporter DKE42_RS00300 PF01259 SAICAR synthetase DKE42_RS00310 PF00701 Dihydrodipicolinate synthetase family DKE42_RS00315 PF00857 Isochorismatase family DKE42_RS00320 PF01758 Sodium Bile acid symporter family DKE42_RS00325 PF01554 MatE DKE42_RS00360 PF00324 Amino acid permease DKE42_RS00380 PF00392 Bacterial regulatory proteins, gntR family DKE42_RS00380 PF07702 UTRA domain DKE42_RS00390 PF17391 Urocanase N-terminal domain DKE42_RS00390 PF17392 Urocanase C-terminal domain DKE42_RS00390 PF01175 Urocanase Rossmann-like domain DKE42_RS00395 PF00221 Aromatic amino acid lyase DKE42_RS00400 PF00324 Amino acid permease DKE42_RS00405 PF01979 Amidohydrolase family DKE42_RS00420 PF13419 Haloacid dehalogenase-like hydrolase DKE42_RS00430 PF01810 LysE type translocator DKE42_RS00455 PF01380 SIS domain DKE42_RS00470 PF00586 AIR synthase related protein, N-terminal domain DKE42_RS00470 PF02769 AIR synthase related protein, C-terminal domain DKE42_RS00475 PF01029 NusB family DKE42_RS00515 PF02580 D-Tyr-tRNA(Tyr) deacylase DKE42_RS00520 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DKE42_RS00520 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DKE42_RS00535 PF03069 Acetamidase/Formamidase family DKE42_RS00560 PF00486 Transcriptional regulatory protein, C terminal DKE42_RS00560 PF00072 Response regulator receiver domain DKE42_RS00575 PF01554 MatE DKE42_RS00605 PF02600 Disulfide bond formation protein DsbB DKE42_RS00655 PF05728 Uncharacterised protein family (UPF0227) DKE42_RS00665 PF04115 Ureidoglycolate lyase DKE42_RS00685 PF00860 Permease family DKE42_RS00690 PF00576 HIUase/Transthyretin family DKE42_RS00740 PF03960 ArsC family DKE42_RS00745 PF03372 Endonuclease/Exonuclease/phosphatase family DKE42_RS00770 PF03033 Glycosyltransferase family 28 N-terminal domain DKE42_RS00770 PF04101 Glycosyltransferase family 28 C-terminal domain DKE42_RS00775 PF01225 Mur ligase family, catalytic domain DKE42_RS00775 PF08245 Mur ligase middle domain DKE42_RS00775 PF02875 Mur ligase family, glutamate ligase domain DKE42_RS00780 PF01820 D-ala D-ala ligase N-terminus DKE42_RS00780 PF07478 D-ala D-ala ligase C-terminus DKE42_RS00785 PF03799 Cell division protein FtsQ DKE42_RS00785 PF08478 POTRA domain, FtsQ-type DKE42_RS00800 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase DKE42_RS00810 PF01551 Peptidase family M23 DKE42_RS00815 PF17831 Pyruvate dehydrogenase E1 component middle domain DKE42_RS00815 PF00456 Transketolase, thiamine diphosphate binding domain DKE42_RS00830 PF01169 Uncharacterized protein family UPF0016 DKE42_RS00840 PF01613 Flavin reductase like domain DKE42_RS00840 PF00258 Flavodoxin DKE42_RS00845 PF00478 IMP dehydrogenase / GMP reductase domain DKE42_RS00845 PF00571 CBS domain DKE42_RS00855 PF01243 Pyridoxamine 5'-phosphate oxidase DKE42_RS00855 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region DKE42_RS00910 PF13193 AMP-binding enzyme C-terminal domain DKE42_RS00910 PF16177 Acetyl-coenzyme A synthetase N-terminus DKE42_RS00910 PF00501 AMP-binding enzyme DKE42_RS00920 PF01037 Lrp/AsnC ligand binding domain DKE42_RS00925 PF00296 Luciferase-like monooxygenase DKE42_RS00935 PF00072 Response regulator receiver domain DKE42_RS00935 PF00196 Bacterial regulatory proteins, luxR family DKE42_RS00950 PF04341 Protein of unknown function, DUF485 DKE42_RS00955 PF00474 Sodium:solute symporter family DKE42_RS00985 PF16925 Tetracyclin repressor-like, C-terminal domain DKE42_RS00985 PF00440 Bacterial regulatory proteins, tetR family DKE42_RS00990 PF08240 Alcohol dehydrogenase GroES-like domain DKE42_RS00990 PF00107 Zinc-binding dehydrogenase DKE42_RS01000 PF06942 GlpM protein DKE42_RS01005 PF02581 Thiamine monophosphate synthase DKE42_RS01005 PF03070 TENA/THI-4/PQQC family DKE42_RS01005 PF08543 Phosphomethylpyrimidine kinase DKE42_RS01020 PF00436 Single-strand binding protein family DKE42_RS01040 PF00324 Amino acid permease DKE42_RS01050 PF00202 Aminotransferase class-III DKE42_RS01055 PF00171 Aldehyde dehydrogenase family DKE42_RS01065 PF00857 Isochorismatase family DKE42_RS01070 PF02678 Pirin DKE42_RS01070 PF05726 Pirin C-terminal cupin domain DKE42_RS01110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE42_RS01110 PF03466 LysR substrate binding domain DKE42_RS01165 PF01638 HxlR-like helix-turn-helix DKE42_RS01200 PF02705 K+ potassium transporter DKE42_RS01235 PF00230 Major intrinsic protein DKE42_RS01255 PF01636 Phosphotransferase enzyme family DKE42_RS01270 PF03992 Antibiotic biosynthesis monooxygenase DKE42_RS01285 PF00977 Histidine biosynthesis protein DKE42_RS01290 PF01612 3'-5' exonuclease DKE42_RS01290 PF00570 HRDC domain DKE42_RS01300 PF00117 Glutamine amidotransferase class-I DKE42_RS01305 PF00475 Imidazoleglycerol-phosphate dehydratase DKE42_RS01325 PF00583 Acetyltransferase (GNAT) family DKE42_RS01345 PF00486 Transcriptional regulatory protein, C terminal DKE42_RS01345 PF00072 Response regulator receiver domain DKE42_RS01350 PF09371 Tex-like protein N-terminal domain DKE42_RS01350 PF00575 S1 RNA binding domain DKE42_RS01350 PF17674 HHH domain DKE42_RS01350 PF16921 Tex protein YqgF-like domain DKE42_RS01360 PF00106 short chain dehydrogenase DKE42_RS01475 PF00749 tRNA synthetases class I (E and Q), catalytic domain DKE42_RS01505 PF08245 Mur ligase middle domain DKE42_RS01505 PF02875 Mur ligase family, glutamate ligase domain DKE42_RS01505 PF01225 Mur ligase family, catalytic domain DKE42_RS01510 PF02875 Mur ligase family, glutamate ligase domain DKE42_RS01510 PF08245 Mur ligase middle domain DKE42_RS01510 PF01225 Mur ligase family, catalytic domain DKE42_RS01515 PF00953 Glycosyl transferase family 4 DKE42_RS01535 PF11104 Type IV pilus assembly protein PilM; DKE42_RS01540 PF05137 Fimbrial assembly protein (PilN) DKE42_RS01545 PF04350 Pilus assembly protein, PilO DKE42_RS01555 PF07660 Secretin and TonB N terminus short domain DKE42_RS01555 PF03958 Bacterial type II/III secretion system short domain DKE42_RS01555 PF11741 AMIN domain DKE42_RS01555 PF00263 Bacterial type II and III secretion system protein DKE42_RS01575 PF00310 Glutamine amidotransferases class-II DKE42_RS01575 PF04898 Glutamate synthase central domain DKE42_RS01575 PF01493 GXGXG motif DKE42_RS01575 PF01645 Conserved region in glutamate synthase DKE42_RS01590 PF04011 LemA family DKE42_RS01605 PF07963 Prokaryotic N-terminal methylation motif DKE42_RS01605 PF00114 Pilin (bacterial filament) DKE42_RS01620 PF00210 Ferritin-like domain DKE42_RS01625 PF04324 BFD-like [2Fe-2S] binding domain DKE42_RS01635 PF01042 Endoribonuclease L-PSP DKE42_RS01650 PF01192 RNA polymerase Rpb6 DKE42_RS01655 PF00625 Guanylate kinase DKE42_RS01660 PF02401 LytB protein DKE42_RS01705 PF01782 RimM N-terminal domain DKE42_RS01705 PF05239 PRC-barrel domain DKE42_RS01710 PF01746 tRNA (Guanine-1)-methyltransferase DKE42_RS01715 PF01245 Ribosomal protein L19 DKE42_RS01730 PF16198 tRNA pseudouridylate synthase B C-terminal domain DKE42_RS01730 PF09157 Pseudouridine synthase II TruB, C-terminal DKE42_RS01730 PF01509 TruB family pseudouridylate synthase (N terminal domain) DKE42_RS01745 PF00892 EamA-like transporter family DKE42_RS01760 PF01565 FAD binding domain DKE42_RS01760 PF02913 FAD linked oxidases, C-terminal domain DKE42_RS01780 PF03992 Antibiotic biosynthesis monooxygenase DKE42_RS01795 PF07690 Major Facilitator Superfamily DKE42_RS01815 PF13614 AAA domain DKE42_RS01835 PF08241 Methyltransferase domain DKE42_RS01850 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DKE42_RS01850 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DKE42_RS01855 PF00202 Aminotransferase class-III DKE42_RS01875 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family DKE42_RS01910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE42_RS01910 PF03466 LysR substrate binding domain DKE42_RS01965 PF04024 PspC domain DKE42_RS01985 PF08501 Shikimate dehydrogenase substrate binding domain DKE42_RS01985 PF01488 Shikimate / quinate 5-dehydrogenase DKE42_RS01985 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DKE42_RS01990 PF01218 Coproporphyrinogen III oxidase DKE42_RS02005 PF00459 Inositol monophosphatase family DKE42_RS02025 PF02405 Permease MlaE DKE42_RS02045 PF01544 CorA-like Mg2+ transporter protein DKE42_RS02050 PF03641 Possible lysine decarboxylase DKE42_RS02055 PF00293 NUDIX domain DKE42_RS02105 PF02082 Transcriptional regulator DKE42_RS02110 PF00042 Globin DKE42_RS02110 PF00970 Oxidoreductase FAD-binding domain DKE42_RS02110 PF00175 Oxidoreductase NAD-binding domain DKE42_RS02135 PF00338 Ribosomal protein S10p/S20e DKE42_RS02140 PF00297 Ribosomal protein L3 DKE42_RS02145 PF00573 Ribosomal protein L4/L1 family DKE42_RS02150 PF00276 Ribosomal protein L23 DKE42_RS02155 PF03947 Ribosomal Proteins L2, C-terminal domain DKE42_RS02155 PF00181 Ribosomal Proteins L2, RNA binding domain DKE42_RS02160 PF00203 Ribosomal protein S19 DKE42_RS02165 PF00237 Ribosomal protein L22p/L17e DKE42_RS02175 PF00252 Ribosomal protein L16p/L10e DKE42_RS02180 PF00831 Ribosomal L29 protein DKE42_RS02185 PF00366 Ribosomal protein S17 DKE42_RS02190 PF00238 Ribosomal protein L14p/L23e DKE42_RS02205 PF00253 Ribosomal protein S14p/S29e DKE42_RS02210 PF00410 Ribosomal protein S8 DKE42_RS02215 PF00347 Ribosomal protein L6 DKE42_RS02220 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DKE42_RS02225 PF03719 Ribosomal protein S5, C-terminal domain DKE42_RS02225 PF00333 Ribosomal protein S5, N-terminal domain DKE42_RS02230 PF00327 Ribosomal protein L30p/L7e DKE42_RS02235 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DKE42_RS02240 PF00344 SecY translocase DKE42_RS02245 PF00444 Ribosomal protein L36 DKE42_RS02250 PF00416 Ribosomal protein S13/S18 DKE42_RS02255 PF00411 Ribosomal protein S11 DKE42_RS02260 PF01479 S4 domain DKE42_RS02260 PF00163 Ribosomal protein S4/S9 N-terminal domain DKE42_RS02315 PF09526 Probable metal-binding protein (DUF2387) DKE42_RS02435 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DKE42_RS02435 PF00056 lactate/malate dehydrogenase, NAD binding domain DKE42_RS02460 PF01066 CDP-alcohol phosphatidyltransferase DKE42_RS02510 PF00440 Bacterial regulatory proteins, tetR family DKE42_RS02510 PF17932 Tetracyclin repressor-like, C-terminal domain DKE42_RS02530 PF01039 Carboxyl transferase domain DKE42_RS02535 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DKE42_RS02535 PF02770 Acyl-CoA dehydrogenase, middle domain DKE42_RS02535 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DKE42_RS02575 PF04386 Stringent starvation protein B DKE42_RS02580 PF00043 Glutathione S-transferase, C-terminal domain DKE42_RS02580 PF13417 Glutathione S-transferase, N-terminal domain DKE42_RS02585 PF00380 Ribosomal protein S9/S16 DKE42_RS02595 PF04166 Pyridoxal phosphate biosynthetic protein PdxA DKE42_RS02600 PF00398 Ribosomal RNA adenine dimethylase DKE42_RS02605 PF00398 Ribosomal RNA adenine dimethylase DKE42_RS02610 PF00398 Ribosomal RNA adenine dimethylase DKE42_RS02615 PF00149 Calcineurin-like phosphoesterase DKE42_RS02650 PF10518 TAT (twin-arginine translocation) pathway signal sequence DKE42_RS02650 PF00149 Calcineurin-like phosphoesterase DKE42_RS02660 PF00990 Diguanylate cyclase, GGDEF domain DKE42_RS02660 PF17152 Periplasmic sensor domain DKE42_RS02665 PF13689 YfiR/HmsC-like DKE42_RS02730 PF03061 Thioesterase superfamily DKE42_RS02765 PF03795 YCII-related domain DKE42_RS02770 PF04279 Intracellular septation protein A DKE42_RS02790 PF02441 Flavoprotein DKE42_RS02790 PF04127 DNA / pantothenate metabolism flavoprotein DKE42_RS02795 PF02355 Protein export membrane protein DKE42_RS02795 PF07549 SecD/SecF GG Motif DKE42_RS02805 PF02699 Preprotein translocase subunit DKE42_RS02810 PF01702 Queuine tRNA-ribosyltransferase DKE42_RS02815 PF02547 Queuosine biosynthesis protein DKE42_RS02845 PF01522 Polysaccharide deacetylase DKE42_RS02905 PF06146 Phosphate-starvation-inducible E DKE42_RS02910 PF00043 Glutathione S-transferase, C-terminal domain DKE42_RS02910 PF02798 Glutathione S-transferase, N-terminal domain DKE42_RS02915 PF03466 LysR substrate binding domain DKE42_RS02915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE42_RS02970 PF01923 Cobalamin adenosyltransferase DKE42_RS02985 PF00291 Pyridoxal-phosphate dependent enzyme DKE42_RS03020 PF01039 Carboxyl transferase domain DKE42_RS03075 PF13673 Acetyltransferase (GNAT) domain DKE42_RS03100 PF02311 AraC-like ligand binding domain DKE42_RS03100 PF12833 Helix-turn-helix domain DKE42_RS03110 PF04966 Carbohydrate-selective porin, OprB family DKE42_RS03120 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DKE42_RS03120 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DKE42_RS03130 PF00893 Small Multidrug Resistance protein DKE42_RS03145 PF07963 Prokaryotic N-terminal methylation motif DKE42_RS03145 PF00114 Pilin (bacterial filament) DKE42_RS03150 PF00691 OmpA family DKE42_RS03150 PF13505 Outer membrane protein beta-barrel domain DKE42_RS03175 PF00009 Elongation factor Tu GTP binding domain DKE42_RS03175 PF00679 Elongation factor G C-terminus DKE42_RS03175 PF03144 Elongation factor Tu domain 2 DKE42_RS03195 PF06827 Zinc finger found in FPG and IleRS DKE42_RS03195 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DKE42_RS03195 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DKE42_RS03200 PF02245 Methylpurine-DNA glycosylase (MPG) DKE42_RS03210 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DKE42_RS03215 PF03547 Membrane transport protein DKE42_RS03255 PF01613 Flavin reductase like domain DKE42_RS03270 PF00296 Luciferase-like monooxygenase DKE42_RS03285 PF04343 Protein of unknown function, DUF488 DKE42_RS03290 PF08274 PhnA Zinc-Ribbon DKE42_RS03290 PF03831 PhnA domain DKE42_RS03295 PF07411 Domain of unknown function (DUF1508) DKE42_RS03320 PF00072 Response regulator receiver domain DKE42_RS03325 PF00072 Response regulator receiver domain DKE42_RS03330 PF01584 CheW-like domain DKE42_RS03340 PF01627 Hpt domain DKE42_RS03340 PF00072 Response regulator receiver domain DKE42_RS03340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKE42_RS03340 PF01584 CheW-like domain DKE42_RS03355 PF08085 Entericidin EcnA/B family DKE42_RS03365 PF04304 Protein of unknown function (DUF454) DKE42_RS03420 PF12805 FUSC-like inner membrane protein yccS DKE42_RS03425 PF07690 Major Facilitator Superfamily DKE42_RS03445 PF01235 Sodium:alanine symporter family DKE42_RS03455 PF00291 Pyridoxal-phosphate dependent enzyme DKE42_RS03455 PF13291 ACT domain DKE42_RS03490 PF02637 GatB domain DKE42_RS03490 PF02934 GatB/GatE catalytic domain DKE42_RS03495 PF01425 Amidase DKE42_RS03500 PF02686 Glu-tRNAGln amidotransferase C subunit DKE42_RS03510 PF04085 rod shape-determining protein MreC DKE42_RS03520 PF02545 Maf-like protein DKE42_RS03525 PF10150 Ribonuclease E/G family DKE42_RS03525 PF00575 S1 RNA binding domain DKE42_RS03535 PF06974 Protein of unknown function (DUF1298) DKE42_RS03535 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain DKE42_RS03575 PF02673 Bacitracin resistance protein BacA DKE42_RS03580 PF06719 AraC-type transcriptional regulator N-terminus DKE42_RS03580 PF12833 Helix-turn-helix domain DKE42_RS03590 PF01965 DJ-1/PfpI family DKE42_RS03610 PF04244 Deoxyribodipyrimidine photo-lyase-related protein DKE42_RS03615 PF09297 NADH pyrophosphatase zinc ribbon domain DKE42_RS03615 PF00293 NUDIX domain DKE42_RS03640 PF01145 SPFH domain / Band 7 family DKE42_RS03650 PF01734 Patatin-like phospholipase DKE42_RS03680 PF00486 Transcriptional regulatory protein, C terminal DKE42_RS03680 PF00072 Response regulator receiver domain DKE42_RS03685 PF08521 Two-component sensor kinase N-terminal DKE42_RS03685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKE42_RS03685 PF00512 His Kinase A (phospho-acceptor) domain DKE42_RS03700 PF00909 Ammonium Transporter Family DKE42_RS03705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE42_RS03705 PF03466 LysR substrate binding domain DKE42_RS03750 PF01906 Putative heavy-metal-binding DKE42_RS03760 PF02321 Outer membrane efflux protein DKE42_RS03795 PF00829 Ribosomal prokaryotic L21 protein DKE42_RS03800 PF01016 Ribosomal L27 protein DKE42_RS03805 PF03548 Outer membrane lipoprotein carrier protein LolA DKE42_RS03825 PF00588 SpoU rRNA Methylase family DKE42_RS03855 PF03358 NADPH-dependent FMN reductase DKE42_RS03875 PF03099 Biotin/lipoate A/B protein ligase family DKE42_RS03880 PF04359 Protein of unknown function (DUF493) DKE42_RS03910 PF00285 Citrate synthase, C-terminal domain DKE42_RS03920 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DKE42_RS03930 PF00890 FAD binding domain DKE42_RS03930 PF02910 Fumarate reductase flavoprotein C-term DKE42_RS03935 PF13085 2Fe-2S iron-sulfur cluster binding domain DKE42_RS03950 PF00676 Dehydrogenase E1 component DKE42_RS03950 PF16870 2-oxoglutarate dehydrogenase C-terminal DKE42_RS03950 PF02779 Transketolase, pyrimidine binding domain DKE42_RS03950 PF16078 2-oxoglutarate dehydrogenase N-terminus DKE42_RS03955 PF02817 e3 binding domain DKE42_RS03955 PF00364 Biotin-requiring enzyme DKE42_RS03955 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DKE42_RS03965 PF08442 ATP-grasp domain DKE42_RS03965 PF00549 CoA-ligase DKE42_RS04015 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DKE42_RS04025 PF00582 Universal stress protein family DKE42_RS04045 PF01272 Transcription elongation factor, GreA/GreB, C-term DKE42_RS04045 PF03449 Transcription elongation factor, N-terminal DKE42_RS04050 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DKE42_RS04050 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DKE42_RS04050 PF02142 MGS-like domain DKE42_RS04055 PF00117 Glutamine amidotransferase class-I DKE42_RS04055 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DKE42_RS04085 PF06480 FtsH Extracellular DKE42_RS04085 PF01434 Peptidase family M41 DKE42_RS04085 PF17862 AAA+ lid domain DKE42_RS04085 PF00004 ATPase family associated with various cellular activities (AAA) DKE42_RS04125 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DKE42_RS04125 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DKE42_RS04145 PF00083 Sugar (and other) transporter DKE42_RS04150 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DKE42_RS04150 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DKE42_RS04185 PF00166 Chaperonin 10 Kd subunit DKE42_RS04195 PF01219 Prokaryotic diacylglycerol kinase DKE42_RS04220 PF01435 Peptidase family M48 DKE42_RS04300 PF00529 HlyD membrane-fusion protein of T1SS DKE42_RS04300 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DKE42_RS04305 PF00873 AcrB/AcrD/AcrF family DKE42_RS04335 PF02634 FdhD/NarQ family DKE42_RS04350 PF00152 tRNA synthetases class II (D, K and N) DKE42_RS04370 PF00324 Amino acid permease DKE42_RS04385 PF01678 Diaminopimelate epimerase DKE42_RS04400 PF01012 Electron transfer flavoprotein domain DKE42_RS04435 PF00266 Aminotransferase class-V DKE42_RS04445 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 DKE42_RS04455 PF12704 MacB-like periplasmic core domain DKE42_RS04455 PF02687 FtsX-like permease family DKE42_RS04460 PF00005 ABC transporter DKE42_RS04475 PF06965 Na+/H+ antiporter 1 DKE42_RS04475 PF01343 Peptidase family S49 DKE42_RS04480 PF12697 Alpha/beta hydrolase family DKE42_RS04485 PF00551 Formyl transferase DKE42_RS04490 PF00586 AIR synthase related protein, N-terminal domain DKE42_RS04490 PF02769 AIR synthase related protein, C-terminal domain DKE42_RS04500 PF00308 Bacterial dnaA protein DKE42_RS04500 PF11638 DnaA N-terminal domain DKE42_RS04500 PF08299 Bacterial dnaA protein helix-turn-helix DKE42_RS04545 PF00691 OmpA family DKE42_RS04550 PF07676 WD40-like Beta Propeller Repeat DKE42_RS04550 PF04052 TolB amino-terminal domain DKE42_RS04560 PF02472 Biopolymer transport protein ExbD/TolR DKE42_RS04565 PF01618 MotA/TolQ/ExbB proton channel family DKE42_RS04570 PF03061 Thioesterase superfamily DKE42_RS04580 PF05491 RuvB C-terminal winged helix domain DKE42_RS04580 PF17864 RuvB AAA lid domain DKE42_RS04580 PF05496 Holliday junction DNA helicase RuvB P-loop domain DKE42_RS04590 PF01966 HD domain DKE42_RS04605 PF01784 NIF3 (NGG1p interacting factor 3) DKE42_RS04615 PF00293 NUDIX domain DKE42_RS04615 PF01467 Cytidylyltransferase-like DKE42_RS04630 PF00578 AhpC/TSA family DKE42_RS04645 PF06508 Queuosine biosynthesis protein QueC DKE42_RS04700 PF02618 YceG-like family DKE42_RS04705 PF02223 Thymidylate kinase DKE42_RS04710 PF02223 Thymidylate kinase DKE42_RS04720 PF00890 FAD binding domain DKE42_RS04720 PF02910 Fumarate reductase flavoprotein C-term DKE42_RS04735 PF00009 Elongation factor Tu GTP binding domain DKE42_RS04735 PF03144 Elongation factor Tu domain 2 DKE42_RS04735 PF06421 GTP-binding protein LepA C-terminus DKE42_RS04735 PF00679 Elongation factor G C-terminus DKE42_RS04770 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ DKE42_RS04775 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) DKE42_RS04780 PF00106 short chain dehydrogenase DKE42_RS04805 PF00892 EamA-like transporter family DKE42_RS04830 PF02151 UvrB/uvrC motif DKE42_RS04830 PF12344 Ultra-violet resistance protein B DKE42_RS04830 PF17757 UvrB interaction domain DKE42_RS04830 PF04851 Type III restriction enzyme, res subunit DKE42_RS04830 PF00271 Helicase conserved C-terminal domain DKE42_RS04865 PF01472 PUA domain DKE42_RS04865 PF00696 Amino acid kinase family DKE42_RS04900 PF02350 UDP-N-acetylglucosamine 2-epimerase DKE42_RS04935 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DKE42_RS04940 PF07992 Pyridine nucleotide-disulphide oxidoreductase DKE42_RS04980 PF03466 LysR substrate binding domain DKE42_RS04980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE42_RS04985 PF00375 Sodium:dicarboxylate symporter family DKE42_RS04990 PF02567 Phenazine biosynthesis-like protein DKE42_RS05025 PF02581 Thiamine monophosphate synthase DKE42_RS05030 PF00202 Aminotransferase class-III DKE42_RS05040 PF00849 RNA pseudouridylate synthase DKE42_RS05080 PF00282 Pyridoxal-dependent decarboxylase conserved domain DKE42_RS05085 PF00171 Aldehyde dehydrogenase family DKE42_RS05090 PF01037 Lrp/AsnC ligand binding domain DKE42_RS05105 PF12849 PBP superfamily domain DKE42_RS05140 PF00206 Lyase DKE42_RS05140 PF08328 Adenylosuccinate lyase C-terminal DKE42_RS05155 PF13344 Haloacid dehalogenase-like hydrolase DKE42_RS05155 PF00293 NUDIX domain DKE42_RS05160 PF00132 Bacterial transferase hexapeptide (six repeats) DKE42_RS05165 PF07943 Penicillin-binding protein 5, C-terminal domain DKE42_RS05165 PF00768 D-alanyl-D-alanine carboxypeptidase DKE42_RS05180 PF01975 Survival protein SurE DKE42_RS05205 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DKE42_RS05210 PF13593 SBF-like CPA transporter family (DUF4137) DKE42_RS05215 PF01197 Ribosomal protein L31 DKE42_RS05230 PF04055 Radical SAM superfamily DKE42_RS05240 PF02554 Carbon starvation protein CstA DKE42_RS05240 PF13722 5TM C-terminal transporter carbon starvation CstA DKE42_RS05245 PF04328 Selenoprotein, putative DKE42_RS05290 PF17954 Quercetinase C-terminal cupin domain DKE42_RS05290 PF02678 Pirin DKE42_RS05300 PF00668 Condensation domain DKE42_RS05300 PF00550 Phosphopantetheine attachment site DKE42_RS05300 PF13193 AMP-binding enzyme C-terminal domain DKE42_RS05300 PF00501 AMP-binding enzyme DKE42_RS05320 PF00005 ABC transporter DKE42_RS05330 PF00593 TonB dependent receptor DKE42_RS05330 PF07715 TonB-dependent Receptor Plug Domain DKE42_RS05335 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) DKE42_RS05350 PF00857 Isochorismatase family DKE42_RS05350 PF00550 Phosphopantetheine attachment site DKE42_RS05370 PF00005 ABC transporter DKE42_RS05385 PF00425 chorismate binding enzyme DKE42_RS05425 PF01227 GTP cyclohydrolase I DKE42_RS05460 PF00218 Indole-3-glycerol phosphate synthase DKE42_RS05465 PF02885 Glycosyl transferase family, helical bundle domain DKE42_RS05465 PF00591 Glycosyl transferase family, a/b domain DKE42_RS05480 PF00117 Glutamine amidotransferase class-I DKE42_RS05735 PF03951 Glutamine synthetase, beta-Grasp domain DKE42_RS05735 PF00120 Glutamine synthetase, catalytic domain DKE42_RS05780 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DKE42_RS05780 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DKE42_RS05795 PF01743 Poly A polymerase head domain DKE42_RS05795 PF12627 Probable RNA and SrmB- binding site of polymerase A DKE42_RS05800 PF01515 Phosphate acetyl/butaryl transferase DKE42_RS05800 PF03949 Malic enzyme, NAD binding domain DKE42_RS05800 PF00390 Malic enzyme, N-terminal domain DKE42_RS05815 PF02219 Methylenetetrahydrofolate reductase DKE42_RS05840 PF04055 Radical SAM superfamily DKE42_RS05845 PF07992 Pyridine nucleotide-disulphide oxidoreductase DKE42_RS05845 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DKE42_RS05865 PF00557 Metallopeptidase family M24 DKE42_RS05905 PF05036 Sporulation related domain DKE42_RS05905 PF03330 Lytic transglycolase DKE42_RS05930 PF01061 ABC-2 type transporter DKE42_RS05940 PF00589 Phage integrase family DKE42_RS06170 PF11799 impB/mucB/samB family C-terminal domain DKE42_RS06170 PF00817 impB/mucB/samB family DKE42_RS06170 PF13438 Domain of unknown function (DUF4113) DKE42_RS06220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE42_RS06220 PF03466 LysR substrate binding domain DKE42_RS06230 PF00528 Binding-protein-dependent transport system inner membrane component DKE42_RS06245 PF00893 Small Multidrug Resistance protein DKE42_RS06250 PF00037 4Fe-4S binding domain DKE42_RS06255 PF01136 Peptidase family U32 DKE42_RS06255 PF16325 Peptidase family U32 C-terminal domain DKE42_RS06265 PF02567 Phenazine biosynthesis-like protein DKE42_RS06270 PF00970 Oxidoreductase FAD-binding domain DKE42_RS06270 PF00175 Oxidoreductase NAD-binding domain DKE42_RS06320 PF14814 Bifunctional transglycosylase second domain DKE42_RS06320 PF00905 Penicillin binding protein transpeptidase domain DKE42_RS06320 PF00912 Transglycosylase DKE42_RS06325 PF01513 ATP-NAD kinase DKE42_RS06330 PF07023 Protein of unknown function (DUF1315) DKE42_RS06360 PF01842 ACT domain DKE42_RS06360 PF00800 Prephenate dehydratase DKE42_RS06360 PF01817 Chorismate mutase type II DKE42_RS06400 PF01139 tRNA-splicing ligase RtcB DKE42_RS06405 PF00753 Metallo-beta-lactamase superfamily DKE42_RS06420 PF03883 Peroxide stress protein YaaA DKE42_RS06430 PF05690 Thiazole biosynthesis protein ThiG DKE42_RS06455 PF00313 'Cold-shock' DNA-binding domain DKE42_RS06460 PF00270 DEAD/DEAH box helicase DKE42_RS06460 PF00271 Helicase conserved C-terminal domain DKE42_RS06470 PF00881 Nitroreductase family DKE42_RS06475 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DKE42_RS06475 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DKE42_RS06530 PF09424 Yqey-like protein DKE42_RS06535 PF01165 Ribosomal protein S21 DKE42_RS06560 PF03793 PASTA domain DKE42_RS06560 PF00069 Protein kinase domain DKE42_RS06585 PF00313 'Cold-shock' DNA-binding domain DKE42_RS06605 PF03616 Sodium/glutamate symporter DKE42_RS06690 PF04403 Paraquat-inducible protein A DKE42_RS06715 PF00072 Response regulator receiver domain DKE42_RS06715 PF00486 Transcriptional regulatory protein, C terminal DKE42_RS06765 PF00486 Transcriptional regulatory protein, C terminal DKE42_RS06765 PF00072 Response regulator receiver domain DKE42_RS06790 PF07995 Glucose / Sorbosone dehydrogenase DKE42_RS06810 PF00375 Sodium:dicarboxylate symporter family DKE42_RS06825 PF00528 Binding-protein-dependent transport system inner membrane component DKE42_RS06845 PF01808 AICARFT/IMPCHase bienzyme DKE42_RS06845 PF02142 MGS-like domain DKE42_RS06890 PF08379 Bacterial transglutaminase-like N-terminal region DKE42_RS06890 PF01841 Transglutaminase-like superfamily DKE42_RS06900 PF00842 Alanine racemase, C-terminal domain DKE42_RS06900 PF01168 Alanine racemase, N-terminal domain DKE42_RS06905 PF00772 DnaB-like helicase N terminal domain DKE42_RS06905 PF03796 DnaB-like helicase C terminal domain DKE42_RS06910 PF03948 Ribosomal protein L9, C-terminal domain DKE42_RS06910 PF01281 Ribosomal protein L9, N-terminal domain DKE42_RS06915 PF01084 Ribosomal protein S18 DKE42_RS06920 PF01250 Ribosomal protein S6 DKE42_RS06930 PF03626 Prokaryotic Cytochrome C oxidase subunit IV DKE42_RS06935 PF00510 Cytochrome c oxidase subunit III DKE42_RS06940 PF00115 Cytochrome C and Quinol oxidase polypeptide I DKE42_RS06945 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DKE42_RS06945 PF06481 COX Aromatic Rich Motif DKE42_RS06955 PF00391 PEP-utilising enzyme, mobile domain DKE42_RS06955 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DKE42_RS06955 PF02896 PEP-utilising enzyme, TIM barrel domain DKE42_RS06980 PF13994 PgaD-like protein DKE42_RS07015 PF00472 RF-1 domain DKE42_RS07015 PF03462 PCRF domain DKE42_RS07020 PF13847 Methyltransferase domain DKE42_RS07020 PF17827 PrmC N-terminal domain DKE42_RS07025 PF00528 Binding-protein-dependent transport system inner membrane component DKE42_RS07045 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DKE42_RS07045 PF02770 Acyl-CoA dehydrogenase, middle domain DKE42_RS07045 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DKE42_RS07050 PF01613 Flavin reductase like domain DKE42_RS07055 PF00899 ThiF family DKE42_RS07060 PF03109 ABC1 family DKE42_RS07065 PF02152 Dihydroneopterin aldolase DKE42_RS07085 PF02669 K+-transporting ATPase, c chain DKE42_RS07095 PF00072 Response regulator receiver domain DKE42_RS07095 PF00486 Transcriptional regulatory protein, C terminal DKE42_RS07110 PF03232 Ubiquinone biosynthesis protein COQ7 DKE42_RS07160 PF07690 Major Facilitator Superfamily DKE42_RS07170 PF03466 LysR substrate binding domain DKE42_RS07170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE42_RS07175 PF04284 Protein of unknown function (DUF441) DKE42_RS07200 PF01479 S4 domain DKE42_RS07200 PF00849 RNA pseudouridylate synthase DKE42_RS07205 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DKE42_RS07220 PF17209 Hfq protein DKE42_RS07250 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain DKE42_RS07250 PF00749 tRNA synthetases class I (E and Q), catalytic domain DKE42_RS07255 PF02540 NAD synthase DKE42_RS07255 PF00117 Glutamine amidotransferase class-I DKE42_RS07255 PF00958 GMP synthase C terminal domain DKE42_RS07260 PF05985 Ethanolamine ammonia-lyase light chain (EutC) DKE42_RS07295 PF05970 PIF1-like helicase DKE42_RS07295 PF14493 Helix-turn-helix domain DKE42_RS07305 PF02110 Hydroxyethylthiazole kinase family DKE42_RS07335 PF13953 PapC C-terminal domain DKE42_RS07335 PF00577 Outer membrane usher protein DKE42_RS07335 PF13954 PapC N-terminal domain DKE42_RS07360 PF01817 Chorismate mutase type II DKE42_RS07390 PF13640 2OG-Fe(II) oxygenase superfamily DKE42_RS07390 PF18331 PKHD-type hydroxylase C-terminal domain DKE42_RS07445 PF01638 HxlR-like helix-turn-helix DKE42_RS07500 PF04151 Bacterial pre-peptidase C-terminal domain DKE42_RS07510 PF00582 Universal stress protein family DKE42_RS07540 PF01810 LysE type translocator DKE42_RS07570 PF01575 MaoC like domain DKE42_RS07635 PF00857 Isochorismatase family DKE42_RS07645 PF01638 HxlR-like helix-turn-helix DKE42_RS07660 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DKE42_RS07660 PF01565 FAD binding domain DKE42_RS07685 PF01645 Conserved region in glutamate synthase DKE42_RS07730 PF00289 Biotin carboxylase, N-terminal domain DKE42_RS07730 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DKE42_RS07730 PF02785 Biotin carboxylase C-terminal domain DKE42_RS07735 PF00364 Biotin-requiring enzyme DKE42_RS07740 PF01220 Dehydroquinase class II DKE42_RS07820 PF12804 MobA-like NTP transferase domain DKE42_RS07860 PF01638 HxlR-like helix-turn-helix DKE42_RS07865 PF00155 Aminotransferase class I and II DKE42_RS07865 PF00392 Bacterial regulatory proteins, gntR family DKE42_RS07890 PF02635 DsrE/DsrF-like family DKE42_RS07895 PF16363 GDP-mannose 4,6 dehydratase DKE42_RS07935 PF01266 FAD dependent oxidoreductase DKE42_RS07945 PF02542 YgbB family DKE42_RS07960 PF00440 Bacterial regulatory proteins, tetR family DKE42_RS07965 PF00158 Sigma-54 interaction domain DKE42_RS07965 PF00072 Response regulator receiver domain DKE42_RS07965 PF02954 Bacterial regulatory protein, Fis family DKE42_RS08005 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DKE42_RS08005 PF13288 DXP reductoisomerase C-terminal domain DKE42_RS08005 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DKE42_RS08030 PF07977 FabA-like domain DKE42_RS08035 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DKE42_RS08035 PF00132 Bacterial transferase hexapeptide (six repeats) DKE42_RS08055 PF00154 recA bacterial DNA recombination protein DKE42_RS08065 PF13419 Haloacid dehalogenase-like hydrolase DKE42_RS08080 PF01037 Lrp/AsnC ligand binding domain DKE42_RS08150 PF00294 pfkB family carbohydrate kinase DKE42_RS08175 PF03928 Haem-degrading DKE42_RS08180 PF05525 Branched-chain amino acid transport protein DKE42_RS08200 PF00462 Glutaredoxin DKE42_RS08205 PF00202 Aminotransferase class-III DKE42_RS08260 PF08173 Membrane bound YbgT-like protein DKE42_RS08265 PF02322 Cytochrome bd terminal oxidase subunit II DKE42_RS08280 PF07290 Protein of unknown function (DUF1449) DKE42_RS08290 PF00294 pfkB family carbohydrate kinase DKE42_RS08310 PF02080 TrkA-C domain DKE42_RS08310 PF02254 TrkA-N domain DKE42_RS08320 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DKE42_RS08345 PF02617 ATP-dependent Clp protease adaptor protein ClpS DKE42_RS08360 PF00793 DAHP synthetase I family DKE42_RS08410 PF06418 CTP synthase N-terminus DKE42_RS08410 PF00117 Glutamine amidotransferase class-I DKE42_RS08450 PF01144 Coenzyme A transferase DKE42_RS08460 PF02803 Thiolase, C-terminal domain DKE42_RS08460 PF00108 Thiolase, N-terminal domain DKE42_RS08465 PF10397 Adenylosuccinate lyase C-terminus DKE42_RS08465 PF00206 Lyase DKE42_RS08470 PF00561 alpha/beta hydrolase fold DKE42_RS08475 PF07690 Major Facilitator Superfamily DKE42_RS08480 PF02627 Carboxymuconolactone decarboxylase family DKE42_RS08490 PF00775 Dioxygenase DKE42_RS08500 PF05048 Periplasmic copper-binding protein (NosD) DKE42_RS08520 PF04143 Sulphur transport DKE42_RS08535 PF01614 Bacterial transcriptional regulator DKE42_RS08535 PF09339 IclR helix-turn-helix domain DKE42_RS08560 PF00106 short chain dehydrogenase DKE42_RS08585 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DKE42_RS08645 PF12146 Serine aminopeptidase, S33 DKE42_RS08655 PF01144 Coenzyme A transferase DKE42_RS08660 PF01144 Coenzyme A transferase DKE42_RS08665 PF00775 Dioxygenase DKE42_RS08665 PF04444 Catechol dioxygenase N terminus DKE42_RS08670 PF02426 Muconolactone delta-isomerase DKE42_RS08690 PF07729 FCD domain DKE42_RS08690 PF00392 Bacterial regulatory proteins, gntR family DKE42_RS08695 PF00920 Dehydratase family DKE42_RS08710 PF00171 Aldehyde dehydrogenase family DKE42_RS08715 PF00576 HIUase/Transthyretin family DKE42_RS08720 PF00860 Permease family DKE42_RS08735 PF00392 Bacterial regulatory proteins, gntR family DKE42_RS08735 PF07729 FCD domain DKE42_RS08760 PF00528 Binding-protein-dependent transport system inner membrane component DKE42_RS08800 PF07992 Pyridine nucleotide-disulphide oxidoreductase DKE42_RS08820 PF00440 Bacterial regulatory proteins, tetR family DKE42_RS08820 PF08359 YsiA-like protein, C-terminal region DKE42_RS08825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE42_RS08825 PF03466 LysR substrate binding domain DKE42_RS08840 PF00106 short chain dehydrogenase DKE42_RS08845 PF01575 MaoC like domain DKE42_RS08860 PF00501 AMP-binding enzyme DKE42_RS08860 PF13193 AMP-binding enzyme C-terminal domain DKE42_RS08960 PF01842 ACT domain DKE42_RS08960 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DKE42_RS08960 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DKE42_RS08965 PF03737 Aldolase/RraA DKE42_RS09015 PF00324 Amino acid permease DKE42_RS09045 PF01032 FecCD transport family DKE42_RS09060 PF14572 Phosphoribosyl synthetase-associated domain DKE42_RS09060 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DKE42_RS09065 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DKE42_RS09120 PF13291 ACT domain DKE42_RS09120 PF02824 TGS domain DKE42_RS09120 PF04607 Region found in RelA / SpoT proteins DKE42_RS09160 PF00561 alpha/beta hydrolase fold DKE42_RS09170 PF09905 DNA-binding protein VF530 DKE42_RS09225 PF08240 Alcohol dehydrogenase GroES-like domain DKE42_RS09225 PF00107 Zinc-binding dehydrogenase DKE42_RS09265 PF00672 HAMP domain DKE42_RS09265 PF00512 His Kinase A (phospho-acceptor) domain DKE42_RS09265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKE42_RS09270 PF00072 Response regulator receiver domain DKE42_RS09270 PF00486 Transcriptional regulatory protein, C terminal DKE42_RS09295 PF01244 Membrane dipeptidase (Peptidase family M19) DKE42_RS09305 PF05402 Coenzyme PQQ synthesis protein D (PqqD) DKE42_RS09310 PF03070 TENA/THI-4/PQQC family DKE42_RS09320 PF08042 PqqA family DKE42_RS09335 PF00550 Phosphopantetheine attachment site DKE42_RS09335 PF00857 Isochorismatase family DKE42_RS09340 PF00106 short chain dehydrogenase DKE42_RS09350 PF00528 Binding-protein-dependent transport system inner membrane component DKE42_RS09370 PF00866 Ring hydroxylating beta subunit DKE42_RS09375 PF00111 2Fe-2S iron-sulfur cluster binding domain DKE42_RS09375 PF00175 Oxidoreductase NAD-binding domain DKE42_RS09375 PF00970 Oxidoreductase FAD-binding domain DKE42_RS09380 PF14525 AraC-binding-like domain DKE42_RS09380 PF12833 Helix-turn-helix domain DKE42_RS09390 PF01613 Flavin reductase like domain DKE42_RS09420 PF12833 Helix-turn-helix domain DKE42_RS09420 PF06719 AraC-type transcriptional regulator N-terminus DKE42_RS09470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE42_RS09470 PF03466 LysR substrate binding domain DKE42_RS09475 PF01144 Coenzyme A transferase DKE42_RS09495 PF03466 LysR substrate binding domain DKE42_RS09495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE42_RS09560 PF01925 Sulfite exporter TauE/SafE DKE42_RS09570 PF04273 Putative phosphatase (DUF442) DKE42_RS09570 PF00753 Metallo-beta-lactamase superfamily DKE42_RS09575 PF00753 Metallo-beta-lactamase superfamily DKE42_RS09590 PF08240 Alcohol dehydrogenase GroES-like domain DKE42_RS09590 PF00107 Zinc-binding dehydrogenase DKE42_RS09595 PF00106 short chain dehydrogenase DKE42_RS09605 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DKE42_RS09605 PF02817 e3 binding domain DKE42_RS09605 PF00364 Biotin-requiring enzyme DKE42_RS09615 PF00676 Dehydrogenase E1 component DKE42_RS09620 PF04055 Radical SAM superfamily DKE42_RS09650 PF05175 Methyltransferase small domain DKE42_RS09675 PF05166 YcgL domain DKE42_RS09695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE42_RS09695 PF03466 LysR substrate binding domain DKE42_RS09700 PF02525 Flavodoxin-like fold DKE42_RS09730 PF00561 alpha/beta hydrolase fold DKE42_RS09745 PF01230 HIT domain DKE42_RS09800 PF01925 Sulfite exporter TauE/SafE DKE42_RS09810 PF02654 Cobalamin-5-phosphate synthase DKE42_RS09830 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase DKE42_RS09875 PF02770 Acyl-CoA dehydrogenase, middle domain DKE42_RS09875 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DKE42_RS09875 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DKE42_RS09885 PF12833 Helix-turn-helix domain DKE42_RS09885 PF12852 Cupin DKE42_RS09895 PF00216 Bacterial DNA-binding protein DKE42_RS09910 PF02082 Transcriptional regulator DKE42_RS09920 PF01592 NifU-like N terminal domain DKE42_RS09930 PF00226 DnaJ domain DKE42_RS09930 PF07743 HSCB C-terminal oligomerisation domain DKE42_RS09935 PF00012 Hsp70 protein DKE42_RS09940 PF00111 2Fe-2S iron-sulfur cluster binding domain DKE42_RS09995 PF00459 Inositol monophosphatase family DKE42_RS10015 PF12911 N-terminal TM domain of oligopeptide transport permease C DKE42_RS10015 PF00528 Binding-protein-dependent transport system inner membrane component DKE42_RS10020 PF00528 Binding-protein-dependent transport system inner membrane component DKE42_RS10060 PF01618 MotA/TolQ/ExbB proton channel family DKE42_RS10065 PF02472 Biopolymer transport protein ExbD/TolR DKE42_RS10080 PF01274 Malate synthase DKE42_RS10100 PF03956 Lysine exporter LysO DKE42_RS10115 PF00216 Bacterial DNA-binding protein DKE42_RS10120 PF00575 S1 RNA binding domain DKE42_RS10125 PF02224 Cytidylate kinase DKE42_RS10165 PF07963 Prokaryotic N-terminal methylation motif DKE42_RS10165 PF02501 Type II secretion system (T2SS), protein I DKE42_RS10180 PF01026 TatD related DNase DKE42_RS10200 PF02606 Tetraacyldisaccharide-1-P 4'-kinase DKE42_RS10220 PF02195 ParB-like nuclease domain DKE42_RS10220 PF17762 HTH domain found in ParB protein DKE42_RS10230 PF02527 rRNA small subunit methyltransferase G DKE42_RS10255 PF01116 Fructose-bisphosphate aldolase class-II DKE42_RS10265 PF00162 Phosphoglycerate kinase DKE42_RS10295 PF00375 Sodium:dicarboxylate symporter family DKE42_RS10305 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) DKE42_RS10320 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term DKE42_RS10320 PF12833 Helix-turn-helix domain DKE42_RS10325 PF01597 Glycine cleavage H-protein DKE42_RS10330 PF02146 Sir2 family DKE42_RS10335 PF00474 Sodium:solute symporter family DKE42_RS10350 PF04229 GrpB protein DKE42_RS10355 PF05958 tRNA (Uracil-5-)-methyltransferase DKE42_RS10365 PF09992 Phosphodiester glycosidase DKE42_RS10385 PF00456 Transketolase, thiamine diphosphate binding domain DKE42_RS10385 PF02779 Transketolase, pyrimidine binding domain DKE42_RS10385 PF02780 Transketolase, C-terminal domain DKE42_RS10390 PF02773 S-adenosylmethionine synthetase, C-terminal domain DKE42_RS10390 PF02772 S-adenosylmethionine synthetase, central domain DKE42_RS10390 PF00438 S-adenosylmethionine synthetase, N-terminal domain DKE42_RS10425 PF02075 Crossover junction endodeoxyribonuclease RuvC DKE42_RS10455 PF16970 Type-1 fimbrial protein, A DKE42_RS10460 PF02753 Pili assembly chaperone PapD, C-terminal domain DKE42_RS10460 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DKE42_RS10515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE42_RS10515 PF03466 LysR substrate binding domain DKE42_RS10545 PF01037 Lrp/AsnC ligand binding domain DKE42_RS10555 PF00005 ABC transporter DKE42_RS10565 PF00528 Binding-protein-dependent transport system inner membrane component DKE42_RS10595 PF03180 NLPA lipoprotein DKE42_RS10600 PF03180 NLPA lipoprotein DKE42_RS10605 PF00005 ABC transporter DKE42_RS10605 PF09383 NIL domain DKE42_RS10615 PF01926 50S ribosome-binding GTPase DKE42_RS10615 PF06071 Protein of unknown function (DUF933) DKE42_RS10645 PF05437 Branched-chain amino acid transport protein (AzlD) DKE42_RS10675 PF12833 Helix-turn-helix domain DKE42_RS10675 PF02311 AraC-like ligand binding domain DKE42_RS10685 PF01641 SelR domain DKE42_RS10695 PF00375 Sodium:dicarboxylate symporter family DKE42_RS10700 PF00710 Asparaginase, N-terminal DKE42_RS10700 PF17763 Glutaminase/Asparaginase C-terminal domain DKE42_RS10710 PF00588 SpoU rRNA Methylase family DKE42_RS10745 PF03466 LysR substrate binding domain DKE42_RS10745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE42_RS10750 PF03358 NADPH-dependent FMN reductase DKE42_RS10765 PF01022 Bacterial regulatory protein, arsR family DKE42_RS10770 PF03960 ArsC family DKE42_RS10810 PF01177 Asp/Glu/Hydantoin racemase DKE42_RS10815 PF02668 Taurine catabolism dioxygenase TauD, TfdA family DKE42_RS10820 PF00528 Binding-protein-dependent transport system inner membrane component DKE42_RS10865 PF02322 Cytochrome bd terminal oxidase subunit II DKE42_RS10910 PF01039 Carboxyl transferase domain DKE42_RS10920 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase DKE42_RS10940 PF00392 Bacterial regulatory proteins, gntR family DKE42_RS10940 PF00155 Aminotransferase class I and II DKE42_RS10945 PF04172 LrgB-like family DKE42_RS10995 PF00581 Rhodanese-like domain DKE42_RS11010 PF00266 Aminotransferase class-V DKE42_RS11020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE42_RS11020 PF03466 LysR substrate binding domain DKE42_RS11045 PF00528 Binding-protein-dependent transport system inner membrane component DKE42_RS11050 PF00528 Binding-protein-dependent transport system inner membrane component DKE42_RS11085 PF13404 AsnC-type helix-turn-helix domain DKE42_RS11085 PF01037 Lrp/AsnC ligand binding domain DKE42_RS11095 PF00717 Peptidase S24-like DKE42_RS11200 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DKE42_RS11200 PF02770 Acyl-CoA dehydrogenase, middle domain DKE42_RS11200 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DKE42_RS11225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE42_RS11225 PF03466 LysR substrate binding domain DKE42_RS11265 PF01144 Coenzyme A transferase DKE42_RS11300 PF09339 IclR helix-turn-helix domain DKE42_RS11315 PF00378 Enoyl-CoA hydratase/isomerase DKE42_RS11330 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DKE42_RS11330 PF02770 Acyl-CoA dehydrogenase, middle domain DKE42_RS11330 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DKE42_RS11345 PF00266 Aminotransferase class-V DKE42_RS11375 PF01168 Alanine racemase, N-terminal domain DKE42_RS11375 PF00842 Alanine racemase, C-terminal domain DKE42_RS11390 PF02525 Flavodoxin-like fold DKE42_RS11395 PF03466 LysR substrate binding domain DKE42_RS11395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE42_RS11440 PF03061 Thioesterase superfamily DKE42_RS11450 PF08223 PaaX-like protein C-terminal domain DKE42_RS11450 PF07848 PaaX-like protein DKE42_RS11460 PF00108 Thiolase, N-terminal domain DKE42_RS11460 PF02803 Thiolase, C-terminal domain DKE42_RS11485 PF01883 Iron-sulfur cluster assembly protein DKE42_RS11495 PF06243 Phenylacetic acid degradation B DKE42_RS11500 PF05138 Phenylacetic acid catabolic protein DKE42_RS11530 PF00376 MerR family regulatory protein DKE42_RS11530 PF09278 MerR, DNA binding DKE42_RS11565 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DKE42_RS11570 PF12796 Ankyrin repeats (3 copies) DKE42_RS11575 PF03466 LysR substrate binding domain DKE42_RS11575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE42_RS11655 PF00654 Voltage gated chloride channel DKE42_RS11660 PF00289 Biotin carboxylase, N-terminal domain DKE42_RS11660 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DKE42_RS11660 PF00364 Biotin-requiring enzyme DKE42_RS11660 PF02785 Biotin carboxylase C-terminal domain DKE42_RS11670 PF07286 Protein of unknown function (DUF1445) DKE42_RS11675 PF03746 LamB/YcsF family DKE42_RS11705 PF05114 Protein of unknown function (DUF692) DKE42_RS11795 PF00293 NUDIX domain DKE42_RS11850 PF07690 Major Facilitator Superfamily DKE42_RS11855 PF01292 Prokaryotic cytochrome b561 DKE42_RS11865 PF01638 HxlR-like helix-turn-helix DKE42_RS11890 PF00892 EamA-like transporter family DKE42_RS11900 PF13520 Amino acid permease DKE42_RS11935 PF11953 Domain of unknown function (DUF3470) DKE42_RS11935 PF00037 4Fe-4S binding domain DKE42_RS11945 PF01596 O-methyltransferase DKE42_RS11965 PF00529 HlyD membrane-fusion protein of T1SS DKE42_RS11975 PF02321 Outer membrane efflux protein DKE42_RS11980 PF00005 ABC transporter DKE42_RS11980 PF12399 Branched-chain amino acid ATP-binding cassette transporter DKE42_RS11985 PF03968 OstA-like protein DKE42_RS12000 PF00571 CBS domain DKE42_RS12000 PF01380 SIS domain DKE42_RS12035 PF01638 HxlR-like helix-turn-helix DKE42_RS12050 PF00924 Mechanosensitive ion channel DKE42_RS12110 PF08241 Methyltransferase domain DKE42_RS12115 PF01037 Lrp/AsnC ligand binding domain DKE42_RS12135 PF03279 Bacterial lipid A biosynthesis acyltransferase DKE42_RS12140 PF01810 LysE type translocator DKE42_RS12210 PF00376 MerR family regulatory protein DKE42_RS12210 PF09278 MerR, DNA binding DKE42_RS12235 PF06099 Phenol hydroxylase subunit DKE42_RS12240 PF02332 Methane/Phenol/Toluene Hydroxylase DKE42_RS12245 PF02406 MmoB/DmpM family DKE42_RS12280 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DKE42_RS12280 PF00355 Rieske [2Fe-2S] domain DKE42_RS12285 PF00866 Ring hydroxylating beta subunit DKE42_RS12295 PF00106 short chain dehydrogenase DKE42_RS12325 PF04408 Helicase associated domain (HA2) DKE42_RS12325 PF00270 DEAD/DEAH box helicase DKE42_RS12325 PF00271 Helicase conserved C-terminal domain DKE42_RS12325 PF11898 Domain of unknown function (DUF3418) DKE42_RS12325 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold DKE42_RS12330 PF10417 C-terminal domain of 1-Cys peroxiredoxin DKE42_RS12330 PF00578 AhpC/TSA family DKE42_RS12350 PF07992 Pyridine nucleotide-disulphide oxidoreductase DKE42_RS12350 PF13192 Thioredoxin domain DKE42_RS12360 PF00043 Glutathione S-transferase, C-terminal domain DKE42_RS12360 PF02798 Glutathione S-transferase, N-terminal domain DKE42_RS12370 PF02390 Putative methyltransferase DKE42_RS12390 PF13417 Glutathione S-transferase, N-terminal domain DKE42_RS12390 PF00043 Glutathione S-transferase, C-terminal domain DKE42_RS12405 PF01979 Amidohydrolase family DKE42_RS12410 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DKE42_RS12410 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DKE42_RS12420 PF10672 S-adenosylmethionine-dependent methyltransferase DKE42_RS12420 PF02926 THUMP domain DKE42_RS12420 PF01170 Putative RNA methylase family UPF0020 DKE42_RS12450 PF02566 OsmC-like protein DKE42_RS12465 PF00248 Aldo/keto reductase family DKE42_RS12480 PF00709 Adenylosuccinate synthetase DKE42_RS12560 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system DKE42_RS12730 PF01555 DNA methylase DKE42_RS12815 PF02599 Global regulator protein family DKE42_RS12865 PF00106 short chain dehydrogenase DKE42_RS12885 PF07690 Major Facilitator Superfamily DKE42_RS12890 PF05681 Fumarate hydratase (Fumerase) DKE42_RS12895 PF05683 Fumarase C-terminus DKE42_RS13005 PF03573 outer membrane porin, OprD family DKE42_RS13020 PF07519 Tannase and feruloyl esterase DKE42_RS13035 PF00392 Bacterial regulatory proteins, gntR family DKE42_RS13035 PF07729 FCD domain DKE42_RS13045 PF00701 Dihydrodipicolinate synthetase family DKE42_RS13075 PF00171 Aldehyde dehydrogenase family DKE42_RS13110 PF00202 Aminotransferase class-III DKE42_RS13160 PF05643 Putative bacterial lipoprotein (DUF799) DKE42_RS13170 PF03783 Curli production assembly/transport component CsgG DKE42_RS13195 PF05987 Bacterial protein of unknown function (DUF898) DKE42_RS13235 PF01979 Amidohydrolase family DKE42_RS13240 PF00929 Exonuclease DKE42_RS13255 PF07715 TonB-dependent Receptor Plug Domain DKE42_RS13255 PF00593 TonB dependent receptor DKE42_RS13265 PF00005 ABC transporter DKE42_RS13265 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DKE42_RS13270 PF12911 N-terminal TM domain of oligopeptide transport permease C DKE42_RS13270 PF00528 Binding-protein-dependent transport system inner membrane component DKE42_RS13300 PF00293 NUDIX domain DKE42_RS13300 PF09297 NADH pyrophosphatase zinc ribbon domain DKE42_RS13315 PF02021 Uncharacterised protein family UPF0102 DKE42_RS13330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE42_RS13330 PF03466 LysR substrate binding domain DKE42_RS13335 PF01810 LysE type translocator DKE42_RS13355 PF01494 FAD binding domain DKE42_RS13415 PF02590 Predicted SPOUT methyltransferase DKE42_RS13430 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DKE42_RS13430 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DKE42_RS13440 PF00730 HhH-GPD superfamily base excision DNA repair protein DKE42_RS13440 PF00633 Helix-hairpin-helix motif DKE42_RS13440 PF10576 Iron-sulfur binding domain of endonuclease III DKE42_RS13450 PF05191 Adenylate kinase, active site lid DKE42_RS13480 PF02492 CobW/HypB/UreG, nucleotide-binding domain DKE42_RS13490 PF02814 UreE urease accessory protein, N-terminal domain DKE42_RS13490 PF05194 UreE urease accessory protein, C-terminal domain DKE42_RS13495 PF01979 Amidohydrolase family DKE42_RS13495 PF00449 Urease alpha-subunit, N-terminal domain DKE42_RS13500 PF00699 Urease beta subunit DKE42_RS13505 PF00547 Urease, gamma subunit DKE42_RS13510 PF01774 UreD urease accessory protein DKE42_RS13520 PF17185 NlpE C-terminal OB domain DKE42_RS13520 PF04170 NlpE N-terminal domain DKE42_RS13555 PF00009 Elongation factor Tu GTP binding domain DKE42_RS13575 PF00152 tRNA synthetases class II (D, K and N) DKE42_RS13575 PF01336 OB-fold nucleic acid binding domain DKE42_RS13590 PF00301 Rubredoxin DKE42_RS13600 PF00561 alpha/beta hydrolase fold DKE42_RS13605 PF03466 LysR substrate binding domain DKE42_RS13605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE42_RS13625 PF00912 Transglycosylase DKE42_RS13640 PF00005 ABC transporter DKE42_RS13645 PF13472 GDSL-like Lipase/Acylhydrolase family DKE42_RS13650 PF00484 Carbonic anhydrase DKE42_RS13705 PF01384 Phosphate transporter family DKE42_RS13735 PF01263 Aldose 1-epimerase DKE42_RS13740 PF07690 Major Facilitator Superfamily DKE42_RS13745 PF12833 Helix-turn-helix domain DKE42_RS13745 PF02311 AraC-like ligand binding domain DKE42_RS13750 PF04960 Glutaminase DKE42_RS13775 PF00171 Aldehyde dehydrogenase family DKE42_RS13790 PF12697 Alpha/beta hydrolase family DKE42_RS13805 PF14759 Reductase C-terminal DKE42_RS13805 PF07992 Pyridine nucleotide-disulphide oxidoreductase DKE42_RS13810 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DKE42_RS13820 PF00355 Rieske [2Fe-2S] domain DKE42_RS13830 PF00355 Rieske [2Fe-2S] domain DKE42_RS13835 PF01614 Bacterial transcriptional regulator DKE42_RS13835 PF09339 IclR helix-turn-helix domain DKE42_RS13860 PF00535 Glycosyl transferase family 2 DKE42_RS13885 PF02492 CobW/HypB/UreG, nucleotide-binding domain DKE42_RS13885 PF07683 Cobalamin synthesis protein cobW C-terminal domain DKE42_RS13895 PF03061 Thioesterase superfamily DKE42_RS14105 PF01266 FAD dependent oxidoreductase DKE42_RS14145 PF01168 Alanine racemase, N-terminal domain DKE42_RS14155 PF00437 Type II/IV secretion system protein DKE42_RS14160 PF01475 Ferric uptake regulator family DKE42_RS14185 PF01814 Hemerythrin HHE cation binding domain DKE42_RS14190 PF13230 Glutamine amidotransferases class-II DKE42_RS14200 PF00696 Amino acid kinase family DKE42_RS14210 PF00692 dUTPase DKE42_RS14220 PF13488 Glycine zipper DKE42_RS14220 PF00691 OmpA family DKE42_RS14240 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DKE42_RS14245 PF03776 Septum formation topological specificity factor MinE DKE42_RS14265 PF07992 Pyridine nucleotide-disulphide oxidoreductase DKE42_RS14280 PF00583 Acetyltransferase (GNAT) family DKE42_RS14295 PF00009 Elongation factor Tu GTP binding domain DKE42_RS14295 PF03143 Elongation factor Tu C-terminal domain DKE42_RS14295 PF03144 Elongation factor Tu domain 2 DKE42_RS14310 PF00164 Ribosomal protein S12/S23 DKE42_RS14320 PF00109 Beta-ketoacyl synthase, N-terminal domain DKE42_RS14320 PF02801 Beta-ketoacyl synthase, C-terminal domain DKE42_RS14325 PF03653 Uncharacterised protein family (UPF0093) DKE42_RS14355 PF00171 Aldehyde dehydrogenase family DKE42_RS14365 PF07859 alpha/beta hydrolase fold DKE42_RS14400 PF00037 4Fe-4S binding domain DKE42_RS14405 PF01467 Cytidylyltransferase-like DKE42_RS14410 PF01668 SmpB protein DKE42_RS14415 PF03358 NADPH-dependent FMN reductase DKE42_RS14430 PF13525 Outer membrane lipoprotein DKE42_RS14485 PF01386 Ribosomal L25p family DKE42_RS14490 PF01195 Peptidyl-tRNA hydrolase DKE42_RS14495 PF02261 Aspartate decarboxylase DKE42_RS14530 PF00550 Phosphopantetheine attachment site DKE42_RS14545 PF01783 Ribosomal L32p protein family DKE42_RS14550 PF02620 Large ribosomal RNA subunit accumulation protein YceD DKE42_RS14555 PF04315 Elongation factor P hydroxylase DKE42_RS14560 PF01300 Telomere recombination DKE42_RS14575 PF01479 S4 domain DKE42_RS14575 PF00849 RNA pseudouridylate synthase DKE42_RS14590 PF00155 Aminotransferase class I and II DKE42_RS14595 PF04055 Radical SAM superfamily DKE42_RS14595 PF06968 Biotin and Thiamin Synthesis associated domain DKE42_RS14595 PF00202 Aminotransferase class-III DKE42_RS14600 PF12697 Alpha/beta hydrolase family DKE42_RS14600 PF08241 Methyltransferase domain DKE42_RS14610 PF00982 Glycosyltransferase family 20 DKE42_RS14615 PF07690 Major Facilitator Superfamily DKE42_RS14620 PF00210 Ferritin-like domain DKE42_RS14655 PF03309 Type III pantothenate kinase DKE42_RS14670 PF01207 Dihydrouridine synthase (Dus) DKE42_RS14705 PF00692 dUTPase DKE42_RS14720 PF01048 Phosphorylase superfamily DKE42_RS14765 PF13533 Biotin-lipoyl like DKE42_RS14800 PF00970 Oxidoreductase FAD-binding domain DKE42_RS14800 PF00175 Oxidoreductase NAD-binding domain DKE42_RS14805 PF03466 LysR substrate binding domain DKE42_RS14805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE42_RS14820 PF00361 Proton-conducting membrane transporter DKE42_RS14825 PF00361 Proton-conducting membrane transporter DKE42_RS14830 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DKE42_RS14830 PF00361 Proton-conducting membrane transporter DKE42_RS14835 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DKE42_RS14840 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DKE42_RS14845 PF12838 4Fe-4S dicluster domain DKE42_RS14860 PF10531 SLBB domain DKE42_RS14860 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DKE42_RS14860 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DKE42_RS14870 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DKE42_RS14870 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DKE42_RS14875 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DKE42_RS14900 PF00486 Transcriptional regulatory protein, C terminal DKE42_RS14900 PF00072 Response regulator receiver domain DKE42_RS14950 PF13276 HTH-like domain DKE42_RS14950 PF00665 Integrase core domain DKE42_RS14950 PF13333 Integrase core domain DKE42_RS14965 PF07715 TonB-dependent Receptor Plug Domain DKE42_RS14965 PF00593 TonB dependent receptor DKE42_RS15010 PF01252 Signal peptidase (SPase) II DKE42_RS15020 PF13411 MerR HTH family regulatory protein DKE42_RS15030 PF01381 Helix-turn-helix DKE42_RS15100 PF00132 Bacterial transferase hexapeptide (six repeats) DKE42_RS15140 PF02321 Outer membrane efflux protein DKE42_RS15150 PF17074 Darcynin, domain of unknown function DKE42_RS15175 PF01613 Flavin reductase like domain DKE42_RS15180 PF01717 Cobalamin-independent synthase, Catalytic domain DKE42_RS15180 PF08267 Cobalamin-independent synthase, N-terminal domain DKE42_RS15190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE42_RS15190 PF03466 LysR substrate binding domain DKE42_RS15195 PF01810 LysE type translocator DKE42_RS15205 PF12833 Helix-turn-helix domain DKE42_RS15245 PF03466 LysR substrate binding domain DKE42_RS15245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE42_RS15265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE42_RS15265 PF03466 LysR substrate binding domain DKE42_RS15355 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DKE42_RS15355 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DKE42_RS15360 PF00893 Small Multidrug Resistance protein DKE42_RS15390 PF00834 Ribulose-phosphate 3 epimerase family DKE42_RS15405 PF04445 Putative SAM-dependent methyltransferase DKE42_RS15410 PF00814 Glycoprotease family DKE42_RS15415 PF00132 Bacterial transferase hexapeptide (six repeats) DKE42_RS15420 PF00293 NUDIX domain DKE42_RS15460 PF04715 Anthranilate synthase component I, N terminal region DKE42_RS15460 PF00425 chorismate binding enzyme DKE42_RS15470 PF00815 Histidinol dehydrogenase DKE42_RS15475 PF01634 ATP phosphoribosyltransferase DKE42_RS15540 PF00795 Carbon-nitrogen hydrolase DKE42_RS15555 PF02566 OsmC-like protein DKE42_RS15585 PF02325 YGGT family DKE42_RS15590 PF14748 Pyrroline-5-carboxylate reductase dimerisation DKE42_RS15590 PF03807 NADP oxidoreductase coenzyme F420-dependent DKE42_RS15600 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DKE42_RS15610 PF00085 Thioredoxin DKE42_RS15650 PF00453 Ribosomal protein L20 DKE42_RS15655 PF01632 Ribosomal protein L35 DKE42_RS15665 PF07690 Major Facilitator Superfamily DKE42_RS15675 PF00043 Glutathione S-transferase, C-terminal domain DKE42_RS15675 PF02798 Glutathione S-transferase, N-terminal domain DKE42_RS15680 PF00707 Translation initiation factor IF-3, C-terminal domain DKE42_RS15680 PF05198 Translation initiation factor IF-3, N-terminal domain DKE42_RS15700 PF00381 PTS HPr component phosphorylation site DKE42_RS15715 PF02548 Ketopantoate hydroxymethyltransferase DKE42_RS15740 PF00106 short chain dehydrogenase DKE42_RS15750 PF05958 tRNA (Uracil-5-)-methyltransferase DKE42_RS15765 PF00512 His Kinase A (phospho-acceptor) domain DKE42_RS15765 PF00072 Response regulator receiver domain DKE42_RS15765 PF00672 HAMP domain DKE42_RS15765 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DKE42_RS15765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKE42_RS15765 PF01627 Hpt domain DKE42_RS15770 PF00378 Enoyl-CoA hydratase/isomerase DKE42_RS15790 PF00106 short chain dehydrogenase DKE42_RS15795 PF02233 NAD(P) transhydrogenase beta subunit DKE42_RS15800 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch DKE42_RS15805 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DKE42_RS15805 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DKE42_RS15860 PF07992 Pyridine nucleotide-disulphide oxidoreductase DKE42_RS15880 PF01022 Bacterial regulatory protein, arsR family DKE42_RS15885 PF03960 ArsC family DKE42_RS15890 PF13411 MerR HTH family regulatory protein DKE42_RS15950 PF00486 Transcriptional regulatory protein, C terminal DKE42_RS15950 PF00072 Response regulator receiver domain DKE42_RS16035 PF00589 Phage integrase family DKE42_RS16040 PF01207 Dihydrouridine synthase (Dus) DKE42_RS16075 PF01026 TatD related DNase DKE42_RS16110 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DKE42_RS16110 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DKE42_RS16115 PF10369 Small subunit of acetolactate synthase DKE42_RS16120 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DKE42_RS16120 PF00205 Thiamine pyrophosphate enzyme, central domain DKE42_RS16120 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DKE42_RS16140 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DKE42_RS16150 PF02321 Outer membrane efflux protein DKE42_RS16180 PF03193 RsgA GTPase DKE42_RS16190 PF00462 Glutaredoxin DKE42_RS16195 PF02556 Preprotein translocase subunit SecB DKE42_RS16205 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DKE42_RS16205 PF01926 50S ribosome-binding GTPase DKE42_RS16210 PF01011 PQQ enzyme repeat DKE42_RS16210 PF13360 PQQ-like domain DKE42_RS16225 PF04551 GcpE protein DKE42_RS16230 PF13464 Domain of unknown function (DUF4115) DKE42_RS16245 PF00334 Nucleoside diphosphate kinase DKE42_RS16250 PF04384 Iron-sulphur cluster assembly DKE42_RS16265 PF17804 Tail specific protease N-terminal domain DKE42_RS16265 PF11818 C-terminal domain of tail specific protease (DUF3340) DKE42_RS16265 PF00595 PDZ domain DKE42_RS16265 PF03572 Peptidase family S41 DKE42_RS16285 PF00171 Aldehyde dehydrogenase family DKE42_RS16295 PF01202 Shikimate kinase DKE42_RS16300 PF02447 GntP family permease DKE42_RS16305 PF01081 KDPG and KHG aldolase DKE42_RS16310 PF00920 Dehydratase family DKE42_RS16330 PF05681 Fumarate hydratase (Fumerase) DKE42_RS16330 PF05683 Fumarase C-terminus DKE42_RS16350 PF00574 Clp protease DKE42_RS16380 PF00561 alpha/beta hydrolase fold DKE42_RS16380 PF07021 Methionine biosynthesis protein MetW DKE42_RS16390 PF01725 Ham1 family DKE42_RS16400 PF02416 mttA/Hcf106 family DKE42_RS16405 PF02416 mttA/Hcf106 family DKE42_RS16430 PF01790 Prolipoprotein diacylglyceryl transferase DKE42_RS16450 PF00186 Dihydrofolate reductase DKE42_RS16470 PF01618 MotA/TolQ/ExbB proton channel family DKE42_RS16480 PF00551 Formyl transferase DKE42_RS16480 PF01842 ACT domain DKE42_RS16495 PF00830 Ribosomal L28 family DKE42_RS16505 PF02254 TrkA-N domain DKE42_RS16505 PF00999 Sodium/hydrogen exchanger family DKE42_RS16525 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DKE42_RS16545 PF08272 Topoisomerase I zinc-ribbon-like DKE42_RS16545 PF01131 DNA topoisomerase DKE42_RS16545 PF01751 Toprim domain DKE42_RS16545 PF01396 Topoisomerase DNA binding C4 zinc finger DKE42_RS16555 PF01638 HxlR-like helix-turn-helix DKE42_RS16560 PF08240 Alcohol dehydrogenase GroES-like domain DKE42_RS16560 PF00107 Zinc-binding dehydrogenase DKE42_RS16565 PF04102 SlyX DKE42_RS16570 PF12848 ABC transporter DKE42_RS16570 PF00005 ABC transporter DKE42_RS16570 PF16326 ABC transporter C-terminal domain DKE42_RS16580 PF03279 Bacterial lipid A biosynthesis acyltransferase DKE42_RS16600 PF02774 Semialdehyde dehydrogenase, dimerisation domain DKE42_RS16600 PF01118 Semialdehyde dehydrogenase, NAD binding domain DKE42_RS16620 PF01416 tRNA pseudouridine synthase DKE42_RS16630 PF01176 Translation initiation factor 1A / IF-1 DKE42_RS16645 PF00180 Isocitrate/isopropylmalate dehydrogenase DKE42_RS16660 PF00330 Aconitase family (aconitate hydratase) DKE42_RS16670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE42_RS16670 PF03466 LysR substrate binding domain DKE42_RS16695 PF00293 NUDIX domain DKE42_RS16725 PF02798 Glutathione S-transferase, N-terminal domain DKE42_RS16730 PF08279 HTH domain DKE42_RS16730 PF13280 WYL domain DKE42_RS16735 PF13419 Haloacid dehalogenase-like hydrolase DKE42_RS16740 PF01479 S4 domain DKE42_RS16740 PF00849 RNA pseudouridylate synthase DKE42_RS16750 PF13193 AMP-binding enzyme C-terminal domain DKE42_RS16750 PF00501 AMP-binding enzyme DKE42_RS16765 PF03466 LysR substrate binding domain DKE42_RS16765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE42_RS16775 PF06969 HemN C-terminal domain DKE42_RS16775 PF04055 Radical SAM superfamily DKE42_RS16795 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DKE42_RS16795 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DKE42_RS16825 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DKE42_RS16825 PF07992 Pyridine nucleotide-disulphide oxidoreductase DKE42_RS16835 PF03884 DNA gyrase inhibitor YacG DKE42_RS16840 PF00753 Metallo-beta-lactamase superfamily DKE42_RS16845 PF00762 Ferrochelatase DKE42_RS16855 PF01177 Asp/Glu/Hydantoin racemase DKE42_RS16875 PF01206 Sulfurtransferase TusA DKE42_RS16880 PF03471 Transporter associated domain DKE42_RS16880 PF00571 CBS domain DKE42_RS16890 PF01588 Putative tRNA binding domain DKE42_RS16920 PF01430 Hsp33 protein DKE42_RS16940 PF01544 CorA-like Mg2+ transporter protein DKE42_RS16950 PF00312 Ribosomal protein S15 DKE42_RS16955 PF00144 Beta-lactamase DKE42_RS16960 PF13538 UvrD-like helicase C-terminal domain DKE42_RS16990 PF01209 ubiE/COQ5 methyltransferase family DKE42_RS17005 PF01494 FAD binding domain DKE42_RS17010 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DKE42_RS17040 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DKE42_RS17055 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) DKE42_RS17060 PF03334 Na+/H+ antiporter subunit DKE42_RS17065 PF02033 Ribosome-binding factor A DKE42_RS17080 PF17384 RimP C-terminal SH3 domain DKE42_RS17080 PF02576 RimP N-terminal domain DKE42_RS17100 PF03840 Preprotein translocase SecG subunit DKE42_RS17105 PF00121 Triosephosphate isomerase DKE42_RS17125 PF01121 Dephospho-CoA kinase DKE42_RS17135 PF08032 RNA 2'-O ribose methyltransferase substrate binding DKE42_RS17135 PF00588 SpoU rRNA Methylase family DKE42_RS17150 PF02463 RecF/RecN/SMC N terminal domain DKE42_RS17195 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DKE42_RS17195 PF12833 Helix-turn-helix domain DKE42_RS17195 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DKE42_RS17195 PF02805 Metal binding domain of Ada DKE42_RS17200 PF01066 CDP-alcohol phosphatidyltransferase DKE42_RS17210 PF08459 UvrC Helix-hairpin-helix N-terminal DKE42_RS17210 PF01541 GIY-YIG catalytic domain DKE42_RS17210 PF02151 UvrB/uvrC motif DKE42_RS17245 PF02803 Thiolase, C-terminal domain DKE42_RS17245 PF00108 Thiolase, N-terminal domain DKE42_RS17285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKE42_RS17285 PF00183 Hsp90 protein DKE42_RS17300 PF03553 Na+/H+ antiporter family DKE42_RS17300 PF13726 Na+-H+ antiporter family DKE42_RS17335 PF16320 Ribosomal protein L7/L12 dimerisation domain DKE42_RS17335 PF00542 Ribosomal protein L7/L12 C-terminal domain DKE42_RS17340 PF00466 Ribosomal protein L10 DKE42_RS17345 PF00687 Ribosomal protein L1p/L10e family DKE42_RS17350 PF00298 Ribosomal protein L11, RNA binding domain DKE42_RS17350 PF03946 Ribosomal protein L11, N-terminal domain DKE42_RS17355 PF00467 KOW motif DKE42_RS17355 PF02357 Transcription termination factor nusG DKE42_RS17395 PF00425 chorismate binding enzyme DKE42_RS17395 PF04715 Anthranilate synthase component I, N terminal region DKE42_RS17405 PF00498 FHA domain DKE42_RS17405 PF12401 Protein of unknown function (DUF2662) DKE42_RS17425 PF00816 H-NS histone family DKE42_RS17450 PF03900 Porphobilinogen deaminase, C-terminal domain DKE42_RS17450 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DKE42_RS17465 PF14698 Argininosuccinate lyase C-terminal DKE42_RS17465 PF00206 Lyase DKE42_RS17470 PF04362 Bacterial Fe(2+) trafficking DKE42_RS17475 PF01895 PhoU domain DKE42_RS17515 PF00149 Calcineurin-like phosphoesterase DKE42_RS17520 PF01258 Prokaryotic dksA/traR C4-type zinc finger DKE42_RS17525 PF00749 tRNA synthetases class I (E and Q), catalytic domain DKE42_RS17530 PF01098 Cell cycle protein DKE42_RS17555 PF02899 Phage integrase, N-terminal SAM-like domain DKE42_RS17555 PF00589 Phage integrase family DKE42_RS17560 PF13098 Thioredoxin-like domain DKE42_RS17560 PF10411 Disulfide bond isomerase protein N-terminus DKE42_RS17565 PF03447 Homoserine dehydrogenase, NAD binding domain DKE42_RS17565 PF01842 ACT domain DKE42_RS17565 PF00742 Homoserine dehydrogenase DKE42_RS17570 PF00291 Pyridoxal-phosphate dependent enzyme DKE42_RS17575 PF00768 D-alanyl-D-alanine carboxypeptidase DKE42_RS17585 PF00512 His Kinase A (phospho-acceptor) domain DKE42_RS17585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKE42_RS17595 PF03572 Peptidase family S41 DKE42_RS17595 PF00595 PDZ domain DKE42_RS17600 PF06415 BPG-independent PGAM N-terminus (iPGM_N) DKE42_RS17600 PF01676 Metalloenzyme superfamily DKE42_RS17635 PF00677 Lumazine binding domain DKE42_RS17650 PF03477 ATP cone domain DKE42_RS17655 PF00909 Ammonium Transporter Family DKE42_RS17670 PF13335 Magnesium chelatase, subunit ChlI C-terminal DKE42_RS17670 PF01078 Magnesium chelatase, subunit ChlI DKE42_RS17675 PF03358 NADPH-dependent FMN reductase DKE42_RS17685 PF00596 Class II Aldolase and Adducin N-terminal domain DKE42_RS17690 PF00701 Dihydrodipicolinate synthetase family DKE42_RS17705 PF03573 outer membrane porin, OprD family DKE42_RS17710 PF00719 Inorganic pyrophosphatase DKE42_RS17735 PF07690 Major Facilitator Superfamily DKE42_RS17740 PF03458 UPF0126 domain DKE42_RS17750 PF03471 Transporter associated domain DKE42_RS17750 PF03741 Integral membrane protein TerC family DKE42_RS17755 PF03641 Possible lysine decarboxylase DKE42_RS17760 PF07690 Major Facilitator Superfamily DKE42_RS17805 PF03358 NADPH-dependent FMN reductase DKE42_RS17850 PF00440 Bacterial regulatory proteins, tetR family DKE42_RS17875 PF01327 Polypeptide deformylase DKE42_RS17890 PF01300 Telomere recombination DKE42_RS17895 PF00892 EamA-like transporter family DKE42_RS17925 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DKE42_RS17930 PF02874 ATP synthase alpha/beta family, beta-barrel domain DKE42_RS17930 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DKE42_RS17935 PF00231 ATP synthase DKE42_RS17945 PF00213 ATP synthase delta (OSCP) subunit DKE42_RS17950 PF00430 ATP synthase B/B' CF(0) DKE42_RS17955 PF00137 ATP synthase subunit C DKE42_RS17980 PF00005 ABC transporter DKE42_RS17985 PF00950 ABC 3 transport family DKE42_RS17990 PF01810 LysE type translocator DKE42_RS18000 PF03949 Malic enzyme, NAD binding domain DKE42_RS18000 PF00390 Malic enzyme, N-terminal domain DKE42_RS18010 PF05746 DALR anticodon binding domain DKE42_RS18010 PF00750 tRNA synthetases class I (R) DKE42_RS18010 PF03485 Arginyl tRNA synthetase N terminal domain DKE42_RS18030 PF05726 Pirin C-terminal cupin domain DKE42_RS18030 PF02678 Pirin DKE42_RS18040 PF03551 Transcriptional regulator PadR-like family DKE42_RS18045 PF13427 Domain of unknown function (DUF4111) DKE42_RS18045 PF01909 Nucleotidyltransferase domain DKE42_RS18050 PF00958 GMP synthase C terminal domain DKE42_RS18050 PF02540 NAD synthase DKE42_RS18050 PF00117 Glutamine amidotransferase class-I DKE42_RS18060 PF07681 DoxX DKE42_RS18065 PF09335 SNARE associated Golgi protein DKE42_RS18090 PF01722 BolA-like protein DKE42_RS18140 PF00550 Phosphopantetheine attachment site DKE42_RS18140 PF08242 Methyltransferase domain DKE42_RS18140 PF02801 Beta-ketoacyl synthase, C-terminal domain DKE42_RS18140 PF00109 Beta-ketoacyl synthase, N-terminal domain DKE42_RS18140 PF16197 Ketoacyl-synthetase C-terminal extension DKE42_RS18140 PF14765 Polyketide synthase dehydratase DKE42_RS18140 PF00975 Thioesterase domain DKE42_RS18165 PF00765 Autoinducer synthase DKE42_RS18170 PF00392 Bacterial regulatory proteins, gntR family DKE42_RS18170 PF00155 Aminotransferase class I and II DKE42_RS18185 PF00324 Amino acid permease DKE42_RS18190 PF00892 EamA-like transporter family DKE42_RS18210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DKE42_RS18210 PF02770 Acyl-CoA dehydrogenase, middle domain DKE42_RS18210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DKE42_RS18240 PF00324 Amino acid permease DKE42_RS18245 PF01042 Endoribonuclease L-PSP DKE42_RS18260 PF01037 Lrp/AsnC ligand binding domain DKE42_RS18285 PF00849 RNA pseudouridylate synthase DKE42_RS18335 PF13333 Integrase core domain DKE42_RS18335 PF13276 HTH-like domain DKE42_RS18335 PF00665 Integrase core domain DKE42_RS18375 PF00285 Citrate synthase, C-terminal domain DKE42_RS18385 PF07729 FCD domain DKE42_RS18385 PF00392 Bacterial regulatory proteins, gntR family DKE42_RS18395 PF00155 Aminotransferase class I and II DKE42_RS18405 PF01070 FMN-dependent dehydrogenase DKE42_RS18415 PF02652 L-lactate permease DKE42_RS18445 PF00483 Nucleotidyl transferase DKE42_RS18450 PF02397 Bacterial sugar transferase DKE42_RS18475 PF01943 Polysaccharide biosynthesis protein DKE42_RS18480 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DKE42_RS18490 PF04321 RmlD substrate binding domain DKE42_RS18510 PF01451 Low molecular weight phosphotyrosine protein phosphatase DKE42_RS18515 PF13614 AAA domain DKE42_RS18515 PF02706 Chain length determinant protein DKE42_RS18515 PF13807 G-rich domain on putative tyrosine kinase DKE42_RS18535 PF01510 N-acetylmuramoyl-L-alanine amidase DKE42_RS18540 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DKE42_RS18540 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DKE42_RS18555 PF03725 3' exoribonuclease family, domain 2 DKE42_RS18555 PF01138 3' exoribonuclease family, domain 1 DKE42_RS18565 PF00175 Oxidoreductase NAD-binding domain DKE42_RS18575 PF00440 Bacterial regulatory proteins, tetR family DKE42_RS18575 PF08360 QacR-like protein, C-terminal region DKE42_RS18580 PF01323 DSBA-like thioredoxin domain DKE42_RS18590 PF13419 Haloacid dehalogenase-like hydrolase DKE42_RS18595 PF00106 short chain dehydrogenase DKE42_RS18640 PF00440 Bacterial regulatory proteins, tetR family DKE42_RS18640 PF08362 YcdC-like protein, C-terminal region DKE42_RS18670 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DKE42_RS18715 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DKE42_RS18790 PF08245 Mur ligase middle domain DKE42_RS18790 PF02875 Mur ligase family, glutamate ligase domain DKE42_RS18790 PF01225 Mur ligase family, catalytic domain DKE42_RS18805 PF03741 Integral membrane protein TerC family DKE42_RS18830 PF01979 Amidohydrolase family DKE42_RS18835 PF00156 Phosphoribosyl transferase domain DKE42_RS18850 PF01545 Cation efflux family DKE42_RS18850 PF16916 Dimerisation domain of Zinc Transporter DKE42_RS18855 PF02583 Metal-sensitive transcriptional repressor DKE42_RS18860 PF01926 50S ribosome-binding GTPase DKE42_RS18860 PF10396 GTP-binding protein TrmE N-terminus DKE42_RS18860 PF12631 MnmE helical domain DKE42_RS18870 PF01809 Putative membrane protein insertion efficiency factor DKE42_RS18880 PF00468 Ribosomal protein L34 DKE42_RS18895 PF01321 Creatinase/Prolidase N-terminal domain DKE42_RS18895 PF00557 Metallopeptidase family M24 DKE42_RS18915 PF00109 Beta-ketoacyl synthase, N-terminal domain DKE42_RS18915 PF08240 Alcohol dehydrogenase GroES-like domain DKE42_RS18915 PF00698 Acyl transferase domain DKE42_RS18915 PF02801 Beta-ketoacyl synthase, C-terminal domain DKE42_RS18915 PF08659 KR domain DKE42_RS18915 PF00550 Phosphopantetheine attachment site DKE42_RS18915 PF14765 Polyketide synthase dehydratase DKE42_RS18915 PF16197 Ketoacyl-synthetase C-terminal extension DKE42_RS18985 PF04221 RelB antitoxin DKE42_RS19000 PF05973 Phage derived protein Gp49-like (DUF891) DKE42_RS19285 PF17762 HTH domain found in ParB protein DKE42_RS19285 PF02195 ParB-like nuclease domain DKE42_RS19290 PF13614 AAA domain DKE42_RS19320 PF08240 Alcohol dehydrogenase GroES-like domain DKE42_RS19320 PF00107 Zinc-binding dehydrogenase DKE42_RS19325 PF00107 Zinc-binding dehydrogenase DKE42_RS19325 PF08240 Alcohol dehydrogenase GroES-like domain DKE42_RS19415 PF00756 Putative esterase DKE42_RS19425 PF02583 Metal-sensitive transcriptional repressor DKE42_RS19460 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DKE42_RS19560 PF01381 Helix-turn-helix DKE42_RS19595 PF12848 ABC transporter DKE42_RS19595 PF00005 ABC transporter DKE42_RS19695 PF01726 LexA DNA binding domain DKE42_RS19695 PF00717 Peptidase S24-like DKE42_RS19700 PF13438 Domain of unknown function (DUF4113) DKE42_RS19700 PF00817 impB/mucB/samB family DKE42_RS19700 PF11799 impB/mucB/samB family C-terminal domain DKE42_RS19775 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase DKE42_RS19780 PF01636 Phosphotransferase enzyme family DKE42_RS19855 PF02384 N-6 DNA Methylase DKE42_RS19855 PF12950 TaqI-like C-terminal specificity domain DKE42_RS19860 PF12950 TaqI-like C-terminal specificity domain DKE42_RS19860 PF02384 N-6 DNA Methylase