AYJ52_RS00010	PWY-5484	glycolysis II (from fructose 6-phosphate)
AYJ52_RS00065	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AYJ52_RS00065	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AYJ52_RS00065	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AYJ52_RS00070	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AYJ52_RS00070	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
AYJ52_RS00185	PWY-2941	L-lysine biosynthesis II
AYJ52_RS00185	PWY-5097	L-lysine biosynthesis VI
AYJ52_RS00190	PWY-2941	L-lysine biosynthesis II
AYJ52_RS00190	PWY-2942	L-lysine biosynthesis III
AYJ52_RS00190	PWY-5097	L-lysine biosynthesis VI
AYJ52_RS00225	PWY-181	photorespiration
AYJ52_RS00340	PWY-7039	phosphatidate metabolism, as a signaling molecule
AYJ52_RS00530	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AYJ52_RS00530	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AYJ52_RS00530	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
AYJ52_RS00535	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AYJ52_RS00540	PWY-4261	glycerol degradation I
AYJ52_RS00540	PWY-6118	glycerol-3-phosphate shuttle
AYJ52_RS00540	PWY-6952	glycerophosphodiester degradation
AYJ52_RS00545	PWY-4261	glycerol degradation I
AYJ52_RS00565	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
AYJ52_RS00565	PWY-2201	folate transformations I
AYJ52_RS00565	PWY-3841	folate transformations II
AYJ52_RS00565	PWY-5030	L-histidine degradation III
AYJ52_RS00565	PWY-5497	purine nucleobases degradation II (anaerobic)
AYJ52_RS00565	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
AYJ52_RS00600	PWY-6614	tetrahydrofolate biosynthesis
AYJ52_RS00630	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AYJ52_RS00630	PWY-5686	UMP biosynthesis
AYJ52_RS00630	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AYJ52_RS00635	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AYJ52_RS00635	PWY-5686	UMP biosynthesis
AYJ52_RS00635	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AYJ52_RS00725	PWY-5392	reductive TCA cycle II
AYJ52_RS00725	PWY-5537	pyruvate fermentation to acetate V
AYJ52_RS00725	PWY-5538	pyruvate fermentation to acetate VI
AYJ52_RS00725	PWY-5690	TCA cycle II (plants and fungi)
AYJ52_RS00725	PWY-5913	TCA cycle VI (obligate autotrophs)
AYJ52_RS00725	PWY-6728	methylaspartate cycle
AYJ52_RS00725	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AYJ52_RS00725	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AYJ52_RS00730	PWY-5392	reductive TCA cycle II
AYJ52_RS00730	PWY-5537	pyruvate fermentation to acetate V
AYJ52_RS00730	PWY-5538	pyruvate fermentation to acetate VI
AYJ52_RS00730	PWY-5690	TCA cycle II (plants and fungi)
AYJ52_RS00730	PWY-5913	TCA cycle VI (obligate autotrophs)
AYJ52_RS00730	PWY-6728	methylaspartate cycle
AYJ52_RS00730	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AYJ52_RS00730	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AYJ52_RS00735	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
AYJ52_RS00735	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AYJ52_RS00740	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AYJ52_RS00745	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AYJ52_RS00755	PWY-3781	aerobic respiration I (cytochrome c)
AYJ52_RS00755	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AYJ52_RS00755	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AYJ52_RS00755	PWY-5690	TCA cycle II (plants and fungi)
AYJ52_RS00755	PWY-6728	methylaspartate cycle
AYJ52_RS00755	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AYJ52_RS00755	PWY-7254	TCA cycle VII (acetate-producers)
AYJ52_RS00755	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AYJ52_RS00760	PWY-3781	aerobic respiration I (cytochrome c)
AYJ52_RS00760	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AYJ52_RS00760	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AYJ52_RS00760	PWY-5690	TCA cycle II (plants and fungi)
AYJ52_RS00760	PWY-6728	methylaspartate cycle
AYJ52_RS00760	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AYJ52_RS00760	PWY-7254	TCA cycle VII (acetate-producers)
AYJ52_RS00760	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AYJ52_RS00815	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AYJ52_RS00815	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AYJ52_RS00865	PWY-6004	glycine betaine biosynthesis V (from glycine)
AYJ52_RS00870	PWY-5194	siroheme biosynthesis
AYJ52_RS00870	PWY-5441	S-methyl-L-methionine cycle
AYJ52_RS00870	PWY-702	L-methionine biosynthesis II
AYJ52_RS00870	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AYJ52_RS00875	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
AYJ52_RS01075	PWY-5381	pyridine nucleotide cycling (plants)
AYJ52_RS01190	PWY-901	methylglyoxal degradation II
AYJ52_RS01205	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
AYJ52_RS01280	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AYJ52_RS01555	PWY-7723	AYJ52_RS01555
AYJ52_RS01645	PWY-6825	phosphatidylcholine biosynthesis V
AYJ52_RS01690	PWY-6683	sulfate reduction III (assimilatory)
AYJ52_RS01720	PWY-1361	benzoyl-CoA degradation I (aerobic)
AYJ52_RS01720	PWY-5109	2-methylbutanoate biosynthesis
AYJ52_RS01720	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AYJ52_RS01720	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AYJ52_RS01720	PWY-5177	glutaryl-CoA degradation
AYJ52_RS01720	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AYJ52_RS01720	PWY-6435	4-hydroxybenzoate biosynthesis V
AYJ52_RS01720	PWY-6583	pyruvate fermentation to butanol I
AYJ52_RS01720	PWY-6863	pyruvate fermentation to hexanol
AYJ52_RS01720	PWY-6883	pyruvate fermentation to butanol II
AYJ52_RS01720	PWY-6944	androstenedione degradation
AYJ52_RS01720	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AYJ52_RS01720	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AYJ52_RS01720	PWY-7007	methyl ketone biosynthesis
AYJ52_RS01720	PWY-7046	4-coumarate degradation (anaerobic)
AYJ52_RS01720	PWY-7094	fatty acid salvage
AYJ52_RS01720	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AYJ52_RS01720	PWY-735	jasmonic acid biosynthesis
AYJ52_RS01720	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AYJ52_RS01720	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AYJ52_RS01720	PWY-7726	AYJ52_RS01720
AYJ52_RS01785	PWY-2161	folate polyglutamylation
AYJ52_RS01790	PWY-4381	fatty acid biosynthesis initiation I
AYJ52_RS01790	PWY-5743	3-hydroxypropanoate cycle
AYJ52_RS01790	PWY-5744	glyoxylate assimilation
AYJ52_RS01790	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AYJ52_RS01790	PWY-6679	jadomycin biosynthesis
AYJ52_RS01790	PWY-6722	candicidin biosynthesis
AYJ52_RS01790	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AYJ52_RS01835	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AYJ52_RS01835	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AYJ52_RS01835	PWY-6268	adenosylcobalamin salvage from cobalamin
AYJ52_RS01835	PWY-6269	adenosylcobalamin salvage from cobinamide II
AYJ52_RS01985	PWY-5057	L-valine degradation II
AYJ52_RS01985	PWY-5076	L-leucine degradation III
AYJ52_RS01985	PWY-5078	L-isoleucine degradation II
AYJ52_RS01985	PWY-5101	L-isoleucine biosynthesis II
AYJ52_RS01985	PWY-5103	L-isoleucine biosynthesis III
AYJ52_RS01985	PWY-5104	L-isoleucine biosynthesis IV
AYJ52_RS01985	PWY-5108	L-isoleucine biosynthesis V
AYJ52_RS02005	PWY-6700	queuosine biosynthesis
AYJ52_RS02025	PWY-6700	queuosine biosynthesis
AYJ52_RS02230	PWY-7294	xylose degradation IV
AYJ52_RS02230	PWY-7295	L-arabinose degradation IV
AYJ52_RS02310	PWY-4381	fatty acid biosynthesis initiation I
AYJ52_RS02310	PWY-5743	3-hydroxypropanoate cycle
AYJ52_RS02310	PWY-5744	glyoxylate assimilation
AYJ52_RS02310	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AYJ52_RS02310	PWY-6679	jadomycin biosynthesis
AYJ52_RS02310	PWY-6722	candicidin biosynthesis
AYJ52_RS02310	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AYJ52_RS02375	PWY-5669	phosphatidylethanolamine biosynthesis I
AYJ52_RS02400	PWY-1622	formaldehyde assimilation I (serine pathway)
AYJ52_RS02400	PWY-5392	reductive TCA cycle II
AYJ52_RS02400	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AYJ52_RS02400	PWY-5690	TCA cycle II (plants and fungi)
AYJ52_RS02400	PWY-5913	TCA cycle VI (obligate autotrophs)
AYJ52_RS02400	PWY-6728	methylaspartate cycle
AYJ52_RS02400	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AYJ52_RS02400	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AYJ52_RS02400	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AYJ52_RS02450	PWY-7731	AYJ52_RS02450
AYJ52_RS02745	PWY-5667	CDP-diacylglycerol biosynthesis I
AYJ52_RS02745	PWY-6453	stigma estolide biosynthesis
AYJ52_RS02745	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
AYJ52_RS02745	PWY-7587	oleate biosynthesis III (cyanobacteria)
AYJ52_RS02820	PWY-2301	<i>myo</i>-inositol biosynthesis
AYJ52_RS02820	PWY-4702	phytate degradation I
AYJ52_RS02820	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
AYJ52_RS02825	PWY-6891	thiazole biosynthesis II (Bacillus)
AYJ52_RS02825	PWY-6892	thiazole biosynthesis I (E. coli)
AYJ52_RS02825	PWY-7560	methylerythritol phosphate pathway II
AYJ52_RS02830	PWY-6168	flavin biosynthesis III (fungi)
AYJ52_RS02830	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AYJ52_RS02835	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
AYJ52_RS02835	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
AYJ52_RS02840	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AYJ52_RS03015	PWY-6854	ethylene biosynthesis III (microbes)
AYJ52_RS03100	PWY-6829	tRNA methylation (yeast)
AYJ52_RS03100	PWY-7285	methylwyosine biosynthesis
AYJ52_RS03100	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
AYJ52_RS03155	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AYJ52_RS03235	PWY-6164	3-dehydroquinate biosynthesis I
AYJ52_RS03240	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AYJ52_RS03285	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AYJ52_RS03285	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AYJ52_RS03285	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AYJ52_RS03290	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AYJ52_RS03290	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AYJ52_RS03310	PWY-2201	folate transformations I
AYJ52_RS03325	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AYJ52_RS03395	PWY-6825	phosphatidylcholine biosynthesis V
AYJ52_RS03425	PWY-5344	L-homocysteine biosynthesis
AYJ52_RS03425	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
AYJ52_RS03450	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AYJ52_RS03450	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AYJ52_RS03450	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AYJ52_RS03450	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AYJ52_RS03555	PWY-702	L-methionine biosynthesis II
AYJ52_RS03825	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AYJ52_RS03905	PWY-6899	base-degraded thiamin salvage
AYJ52_RS03905	PWY-7356	thiamin salvage IV (yeast)
AYJ52_RS03990	PWY-7723	AYJ52_RS03990
AYJ52_RS04010	PWY-6672	<i>cis</i>-genanyl-CoA degradation
AYJ52_RS04010	PWY-7118	chitin degradation to ethanol
AYJ52_RS04025	PWY-2201	folate transformations I
AYJ52_RS04030	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
AYJ52_RS04060	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AYJ52_RS04060	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AYJ52_RS04065	PWY-6749	CMP-legionaminate biosynthesis I
AYJ52_RS04070	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AYJ52_RS04070	PWY-6596	adenosine nucleotides degradation I
AYJ52_RS04070	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AYJ52_RS04100	PWY-6891	thiazole biosynthesis II (Bacillus)
AYJ52_RS04100	PWY-6892	thiazole biosynthesis I (E. coli)
AYJ52_RS04100	PWY-7560	methylerythritol phosphate pathway II
AYJ52_RS04115	PWY-2201	folate transformations I
AYJ52_RS04115	PWY-5497	purine nucleobases degradation II (anaerobic)
AYJ52_RS04135	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AYJ52_RS04135	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AYJ52_RS04140	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AYJ52_RS04140	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AYJ52_RS04145	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AYJ52_RS04145	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AYJ52_RS04145	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AYJ52_RS04145	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AYJ52_RS04170	PWY-5686	UMP biosynthesis
AYJ52_RS04225	PWY-5691	urate degradation to allantoin I
AYJ52_RS04225	PWY-7394	urate degradation to allantoin II
AYJ52_RS04230	PWY-5691	urate degradation to allantoin I
AYJ52_RS04230	PWY-7394	urate degradation to allantoin II
AYJ52_RS04250	PWY-5697	allantoin degradation to ureidoglycolate I (urea producing)
AYJ52_RS04255	PWY-5694	allantoin degradation to glyoxylate I
AYJ52_RS04255	PWY-5705	allantoin degradation to glyoxylate III
AYJ52_RS04325	PWY-6840	homoglutathione biosynthesis
AYJ52_RS04325	PWY-7255	ergothioneine biosynthesis I (bacteria)
AYJ52_RS04375	PWY-6857	retinol biosynthesis
AYJ52_RS04395	PWY-5669	phosphatidylethanolamine biosynthesis I
AYJ52_RS04400	PWY-5350	thiosulfate disproportionation III (rhodanese)
AYJ52_RS04405	PWY-5381	pyridine nucleotide cycling (plants)
AYJ52_RS04440	PWY-6167	flavin biosynthesis II (archaea)
AYJ52_RS04440	PWY-6168	flavin biosynthesis III (fungi)
AYJ52_RS04440	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AYJ52_RS04445	PWY-6167	flavin biosynthesis II (archaea)
AYJ52_RS04445	PWY-6168	flavin biosynthesis III (fungi)
AYJ52_RS04455	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AYJ52_RS04455	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AYJ52_RS04455	PWY-6896	thiamin salvage I
AYJ52_RS04455	PWY-6897	thiamin salvage II
AYJ52_RS04460	PWY-5269	cardiolipin biosynthesis II
AYJ52_RS04460	PWY-5668	cardiolipin biosynthesis I
AYJ52_RS04465	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AYJ52_RS04465	PWY-5667	CDP-diacylglycerol biosynthesis I
AYJ52_RS04465	PWY-6453	stigma estolide biosynthesis
AYJ52_RS04465	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
AYJ52_RS04465	PWY-7587	oleate biosynthesis III (cyanobacteria)
AYJ52_RS04470	PWY-6749	CMP-legionaminate biosynthesis I
AYJ52_RS04515	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AYJ52_RS04515	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AYJ52_RS04535	PWY-5028	L-histidine degradation II
AYJ52_RS04535	PWY-5030	L-histidine degradation III
AYJ52_RS04545	PWY-5028	L-histidine degradation II
AYJ52_RS04545	PWY-5030	L-histidine degradation III
AYJ52_RS04550	PWY-5028	L-histidine degradation II
AYJ52_RS04550	PWY-5030	L-histidine degradation III
AYJ52_RS04575	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AYJ52_RS04630	PWY-2941	L-lysine biosynthesis II
AYJ52_RS04630	PWY-2942	L-lysine biosynthesis III
AYJ52_RS04630	PWY-5097	L-lysine biosynthesis VI
AYJ52_RS04640	PWY-6123	inosine-5'-phosphate biosynthesis I
AYJ52_RS04640	PWY-6124	inosine-5'-phosphate biosynthesis II
AYJ52_RS04640	PWY-7234	inosine-5'-phosphate biosynthesis III
AYJ52_RS04735	PWY-2941	L-lysine biosynthesis II
AYJ52_RS04735	PWY-2942	L-lysine biosynthesis III
AYJ52_RS04735	PWY-5097	L-lysine biosynthesis VI
AYJ52_RS04770	PWY-1622	formaldehyde assimilation I (serine pathway)
AYJ52_RS04770	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AYJ52_RS04770	PWY-5913	TCA cycle VI (obligate autotrophs)
AYJ52_RS04770	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AYJ52_RS04770	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
AYJ52_RS04770	PWY-6549	L-glutamine biosynthesis III
AYJ52_RS04770	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AYJ52_RS04770	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AYJ52_RS04770	PWY-7124	ethylene biosynthesis V (engineered)
AYJ52_RS04795	PWY-5101	L-isoleucine biosynthesis II
AYJ52_RS04795	PWY-5103	L-isoleucine biosynthesis III
AYJ52_RS04795	PWY-5104	L-isoleucine biosynthesis IV
AYJ52_RS04795	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AYJ52_RS04805	PWY-6825	phosphatidylcholine biosynthesis V
AYJ52_RS04965	PWY-6599	guanine and guanosine salvage II
AYJ52_RS04965	PWY-6609	adenine and adenosine salvage III
AYJ52_RS04965	PWY-6610	adenine and adenosine salvage IV
AYJ52_RS04965	PWY-6620	guanine and guanosine salvage
AYJ52_RS04970	PWY-5497	purine nucleobases degradation II (anaerobic)
AYJ52_RS04970	PWY-6606	guanosine nucleotides degradation II
AYJ52_RS04970	PWY-6608	guanosine nucleotides degradation III
AYJ52_RS04970	PWY-7442	drosopterin and aurodrosopterin biosynthesis
AYJ52_RS05020	PWY-6123	inosine-5'-phosphate biosynthesis I
AYJ52_RS05020	PWY-7234	inosine-5'-phosphate biosynthesis III
AYJ52_RS05150	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
AYJ52_RS05150	PWY-6167	flavin biosynthesis II (archaea)
AYJ52_RS05150	PWY-6168	flavin biosynthesis III (fungi)
AYJ52_RS05195	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AYJ52_RS05220	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
AYJ52_RS05220	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
AYJ52_RS05220	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
AYJ52_RS05220	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
AYJ52_RS05220	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
AYJ52_RS05220	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
AYJ52_RS05220	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
AYJ52_RS05220	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
AYJ52_RS05220	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
AYJ52_RS05220	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
AYJ52_RS05260	PWY-5316	nicotine biosynthesis
AYJ52_RS05260	PWY-5381	pyridine nucleotide cycling (plants)
AYJ52_RS05260	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
AYJ52_RS05260	PWY-7342	superpathway of nicotine biosynthesis
AYJ52_RS05335	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
AYJ52_RS05340	PWY-6936	seleno-amino acid biosynthesis
AYJ52_RS05340	PWY-7274	D-cycloserine biosynthesis
AYJ52_RS05355	PWY-3801	sucrose degradation II (sucrose synthase)
AYJ52_RS05355	PWY-6527	stachyose degradation
AYJ52_RS05355	PWY-7238	sucrose biosynthesis II
AYJ52_RS05355	PWY-7343	UDP-glucose biosynthesis
AYJ52_RS05360	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
AYJ52_RS05365	PWY-3801	sucrose degradation II (sucrose synthase)
AYJ52_RS05365	PWY-5054	sorbitol biosynthesis I
AYJ52_RS05365	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
AYJ52_RS05365	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AYJ52_RS05365	PWY-5659	GDP-mannose biosynthesis
AYJ52_RS05365	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AYJ52_RS05365	PWY-621	sucrose degradation III (sucrose invertase)
AYJ52_RS05365	PWY-622	starch biosynthesis
AYJ52_RS05365	PWY-6981	chitin biosynthesis
AYJ52_RS05365	PWY-6992	1,5-anhydrofructose degradation
AYJ52_RS05365	PWY-7238	sucrose biosynthesis II
AYJ52_RS05365	PWY-7347	sucrose biosynthesis III
AYJ52_RS05365	PWY-7385	1,3-propanediol biosynthesis (engineered)
AYJ52_RS05370	PWY-3821	galactose degradation III
AYJ52_RS05370	PWY-6317	galactose degradation I (Leloir pathway)
AYJ52_RS05370	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
AYJ52_RS05370	PWY-6527	stachyose degradation
AYJ52_RS05370	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
AYJ52_RS05370	PWY-7344	UDP-D-galactose biosynthesis
AYJ52_RS05375	PWY-6749	CMP-legionaminate biosynthesis I
AYJ52_RS05395	PWY-6454	vancomycin resistance I
AYJ52_RS05395	PWY-6901	superpathway of glucose and xylose degradation
AYJ52_RS05400	PWY-5913	TCA cycle VI (obligate autotrophs)
AYJ52_RS05400	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
AYJ52_RS05400	PWY-6638	sulfolactate degradation III
AYJ52_RS05400	PWY-6642	(<i>R</i>)-cysteate degradation
AYJ52_RS05400	PWY-6643	coenzyme M biosynthesis II
AYJ52_RS05400	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AYJ52_RS05400	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AYJ52_RS05400	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AYJ52_RS05410	PWY-5747	2-methylcitrate cycle II
AYJ52_RS05575	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AYJ52_RS05600	PWY-5642	2,4-dinitrotoluene degradation
AYJ52_RS05600	PWY-6373	acrylate degradation
AYJ52_RS05635	PWY-6157	autoinducer AI-1 biosynthesis
AYJ52_RS05685	PWY-6012	acyl carrier protein metabolism I
AYJ52_RS05685	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
AYJ52_RS05740	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AYJ52_RS05845	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AYJ52_RS05855	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AYJ52_RS05970	PWY-6936	seleno-amino acid biosynthesis
AYJ52_RS06340	PWY-5525	D-glucuronate degradation I
AYJ52_RS06350	PWY-6167	flavin biosynthesis II (archaea)
AYJ52_RS06350	PWY-6168	flavin biosynthesis III (fungi)
AYJ52_RS06350	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AYJ52_RS06385	PWY-1042	glycolysis IV (plant cytosol)
AYJ52_RS06385	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AYJ52_RS06385	PWY-5484	glycolysis II (from fructose 6-phosphate)
AYJ52_RS06385	PWY-5723	Rubisco shunt
AYJ52_RS06385	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AYJ52_RS06385	PWY-6886	1-butanol autotrophic biosynthesis
AYJ52_RS06385	PWY-6901	superpathway of glucose and xylose degradation
AYJ52_RS06385	PWY-7003	glycerol degradation to butanol
AYJ52_RS06385	PWY-7124	ethylene biosynthesis V (engineered)
AYJ52_RS06385	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AYJ52_RS06450	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AYJ52_RS06450	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AYJ52_RS06480	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
AYJ52_RS06515	PWY-4983	L-citrulline-nitric oxide cycle
AYJ52_RS06515	PWY-4984	urea cycle
AYJ52_RS06515	PWY-5	canavanine biosynthesis
AYJ52_RS06515	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AYJ52_RS06515	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AYJ52_RS06530	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AYJ52_RS06530	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AYJ52_RS06535	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AYJ52_RS06535	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AYJ52_RS06580	PWY-181	photorespiration
AYJ52_RS06585	PWY-5958	acridone alkaloid biosynthesis
AYJ52_RS06585	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AYJ52_RS06585	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AYJ52_RS06735	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AYJ52_RS06735	PWY-6435	4-hydroxybenzoate biosynthesis V
AYJ52_RS06735	PWY-6863	pyruvate fermentation to hexanol
AYJ52_RS06735	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AYJ52_RS06735	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AYJ52_RS06735	PWY-6948	sitosterol degradation to androstenedione
AYJ52_RS06735	PWY-7094	fatty acid salvage
AYJ52_RS06735	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
AYJ52_RS06735	PWY-7337	10-<i>cis</i>-heptadecenoyl-CoA degradation (yeast)
AYJ52_RS06735	PWY-7338	10-<i>trans</i>-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
AYJ52_RS06735	PWY-7339	10-<i>trans</i>-heptadecenoyl-CoA degradation (MFE-dependent, yeast)
AYJ52_RS06735	PWY-7340	9-<i>cis</i>, 11-<i>trans</i>-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
AYJ52_RS06735	PWY-735	jasmonic acid biosynthesis
AYJ52_RS06735	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AYJ52_RS06735	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AYJ52_RS06735	PWY-7726	AYJ52_RS06735
AYJ52_RS06740	PWY-1361	benzoyl-CoA degradation I (aerobic)
AYJ52_RS06740	PWY-5109	2-methylbutanoate biosynthesis
AYJ52_RS06740	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AYJ52_RS06740	PWY-5137	fatty acid &beta;-oxidation III (unsaturated, odd number)
AYJ52_RS06740	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AYJ52_RS06740	PWY-5177	glutaryl-CoA degradation
AYJ52_RS06740	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AYJ52_RS06740	PWY-6435	4-hydroxybenzoate biosynthesis V
AYJ52_RS06740	PWY-6583	pyruvate fermentation to butanol I
AYJ52_RS06740	PWY-6837	fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent)
AYJ52_RS06740	PWY-6863	pyruvate fermentation to hexanol
AYJ52_RS06740	PWY-6883	pyruvate fermentation to butanol II
AYJ52_RS06740	PWY-6944	androstenedione degradation
AYJ52_RS06740	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AYJ52_RS06740	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AYJ52_RS06740	PWY-7007	methyl ketone biosynthesis
AYJ52_RS06740	PWY-7046	4-coumarate degradation (anaerobic)
AYJ52_RS06740	PWY-7094	fatty acid salvage
AYJ52_RS06740	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AYJ52_RS06740	PWY-7291	oleate &beta;-oxidation (isomerase-dependent, yeast)
AYJ52_RS06740	PWY-735	jasmonic acid biosynthesis
AYJ52_RS06740	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AYJ52_RS06740	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AYJ52_RS06740	PWY-7726	AYJ52_RS06740
AYJ52_RS06780	PWY-5269	cardiolipin biosynthesis II
AYJ52_RS06780	PWY-5668	cardiolipin biosynthesis I
AYJ52_RS06870	PWY-1042	glycolysis IV (plant cytosol)
AYJ52_RS06870	PWY-5484	glycolysis II (from fructose 6-phosphate)
AYJ52_RS06870	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AYJ52_RS06870	PWY-7003	glycerol degradation to butanol
AYJ52_RS06980	PWY-5839	menaquinol-7 biosynthesis
AYJ52_RS06980	PWY-5844	menaquinol-9 biosynthesis
AYJ52_RS06980	PWY-5849	menaquinol-6 biosynthesis
AYJ52_RS06980	PWY-5890	menaquinol-10 biosynthesis
AYJ52_RS06980	PWY-5891	menaquinol-11 biosynthesis
AYJ52_RS06980	PWY-5892	menaquinol-12 biosynthesis
AYJ52_RS06980	PWY-5895	menaquinol-13 biosynthesis
AYJ52_RS07115	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AYJ52_RS07115	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AYJ52_RS07150	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AYJ52_RS07265	PWY-5506	methanol oxidation to formaldehyde IV
AYJ52_RS07320	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AYJ52_RS07365	PWY-2941	L-lysine biosynthesis II
AYJ52_RS07365	PWY-2942	L-lysine biosynthesis III
AYJ52_RS07365	PWY-5097	L-lysine biosynthesis VI
AYJ52_RS07365	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AYJ52_RS07365	PWY-6559	spermidine biosynthesis II
AYJ52_RS07365	PWY-6562	norspermidine biosynthesis
AYJ52_RS07365	PWY-7153	grixazone biosynthesis
AYJ52_RS07365	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AYJ52_RS07485	PWY-2201	folate transformations I
AYJ52_RS07485	PWY-5497	purine nucleobases degradation II (anaerobic)
AYJ52_RS07515	PWY-3841	folate transformations II
AYJ52_RS07515	PWY-6614	tetrahydrofolate biosynthesis
AYJ52_RS07520	PWY-3841	folate transformations II
AYJ52_RS07520	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AYJ52_RS07520	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AYJ52_RS07520	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AYJ52_RS07520	PWY-7199	pyrimidine deoxyribonucleosides salvage
AYJ52_RS07520	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AYJ52_RS07575	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
AYJ52_RS07590	PWY-5344	L-homocysteine biosynthesis
AYJ52_RS07595	PWY-6871	3-methylbutanol biosynthesis
AYJ52_RS07635	PWY-5392	reductive TCA cycle II
AYJ52_RS07635	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AYJ52_RS07635	PWY-5690	TCA cycle II (plants and fungi)
AYJ52_RS07635	PWY-5913	TCA cycle VI (obligate autotrophs)
AYJ52_RS07635	PWY-6728	methylaspartate cycle
AYJ52_RS07635	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AYJ52_RS07635	PWY-7254	TCA cycle VII (acetate-producers)
AYJ52_RS07635	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AYJ52_RS07640	PWY-1281	sulfoacetaldehyde degradation I
AYJ52_RS07640	PWY-5482	pyruvate fermentation to acetate II
AYJ52_RS07640	PWY-5485	pyruvate fermentation to acetate IV
AYJ52_RS07640	PWY-5497	purine nucleobases degradation II (anaerobic)
AYJ52_RS07640	PWY-6637	sulfolactate degradation II
AYJ52_RS07645	PWY-5482	pyruvate fermentation to acetate II
AYJ52_RS07645	PWY-5485	pyruvate fermentation to acetate IV
AYJ52_RS07645	PWY-5497	purine nucleobases degradation II (anaerobic)
AYJ52_RS07650	PWY-5101	L-isoleucine biosynthesis II
AYJ52_RS07650	PWY-5103	L-isoleucine biosynthesis III
AYJ52_RS07650	PWY-5104	L-isoleucine biosynthesis IV
AYJ52_RS07650	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AYJ52_RS07655	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AYJ52_RS07655	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
AYJ52_RS07655	PWY-7242	D-fructuronate degradation
AYJ52_RS07655	PWY-7310	D-glucosaminate degradation
AYJ52_RS07655	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
AYJ52_RS07665	PWY-5530	sorbitol biosynthesis II
AYJ52_RS07665	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AYJ52_RS07675	PWY-3341	L-proline biosynthesis III
AYJ52_RS07675	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AYJ52_RS07690	PWY-6902	chitin degradation II
AYJ52_RS07715	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AYJ52_RS07715	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
AYJ52_RS07715	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AYJ52_RS07715	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AYJ52_RS07715	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
AYJ52_RS07715	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AYJ52_RS07715	PWY-7205	CMP phosphorylation
AYJ52_RS07715	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AYJ52_RS07715	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AYJ52_RS07715	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AYJ52_RS07715	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AYJ52_RS07715	PWY-7224	purine deoxyribonucleosides salvage
AYJ52_RS07715	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AYJ52_RS07715	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AYJ52_RS07720	PWY-2201	folate transformations I
AYJ52_RS07840	PWY-5367	petroselinate biosynthesis
AYJ52_RS07840	PWY-5515	L-arabinose degradation II
AYJ52_RS07840	PWY-5525	D-glucuronate degradation I
AYJ52_RS07840	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AYJ52_RS07840	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AYJ52_RS07840	PWY-5989	stearate biosynthesis II (bacteria and plants)
AYJ52_RS07840	PWY-5994	palmitate biosynthesis I (animals and fungi)
AYJ52_RS07840	PWY-6113	superpathway of mycolate biosynthesis
AYJ52_RS07840	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AYJ52_RS07840	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AYJ52_RS07840	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AYJ52_RS07840	PWY-7663	gondoate biosynthesis (anaerobic)
AYJ52_RS07840	PWY-7664	oleate biosynthesis IV (anaerobic)
AYJ52_RS07840	PWYG-321	mycolate biosynthesis
AYJ52_RS07855	PWY-6012	acyl carrier protein metabolism I
AYJ52_RS07855	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
AYJ52_RS07890	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AYJ52_RS07890	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AYJ52_RS07890	PWY-5989	stearate biosynthesis II (bacteria and plants)
AYJ52_RS07890	PWY-6113	superpathway of mycolate biosynthesis
AYJ52_RS07890	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AYJ52_RS07890	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AYJ52_RS07890	PWY-7663	gondoate biosynthesis (anaerobic)
AYJ52_RS07890	PWY-7664	oleate biosynthesis IV (anaerobic)
AYJ52_RS07890	PWYG-321	mycolate biosynthesis
AYJ52_RS07925	PWY-5101	L-isoleucine biosynthesis II
AYJ52_RS07925	PWY-5103	L-isoleucine biosynthesis III
AYJ52_RS07925	PWY-5104	L-isoleucine biosynthesis IV
AYJ52_RS07925	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AYJ52_RS07925	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AYJ52_RS07925	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AYJ52_RS07925	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AYJ52_RS07930	PWY-5101	L-isoleucine biosynthesis II
AYJ52_RS07930	PWY-5103	L-isoleucine biosynthesis III
AYJ52_RS07930	PWY-5104	L-isoleucine biosynthesis IV
AYJ52_RS07930	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AYJ52_RS07930	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AYJ52_RS07930	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AYJ52_RS07930	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AYJ52_RS07935	PWY-5103	L-isoleucine biosynthesis III
AYJ52_RS07935	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AYJ52_RS08425	PWY-6936	seleno-amino acid biosynthesis
AYJ52_RS08465	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AYJ52_RS08465	PWY-6148	tetrahydromethanopterin biosynthesis
AYJ52_RS08465	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AYJ52_RS08465	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AYJ52_RS08470	PWY-6654	phosphopantothenate biosynthesis III
AYJ52_RS08575	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AYJ52_RS08590	PWY-4381	fatty acid biosynthesis initiation I
AYJ52_RS08590	PWY-5743	3-hydroxypropanoate cycle
AYJ52_RS08590	PWY-5744	glyoxylate assimilation
AYJ52_RS08590	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AYJ52_RS08590	PWY-6679	jadomycin biosynthesis
AYJ52_RS08590	PWY-6722	candicidin biosynthesis
AYJ52_RS08590	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AYJ52_RS08600	PWY-3341	L-proline biosynthesis III
AYJ52_RS08600	PWY-4981	L-proline biosynthesis II (from arginine)
AYJ52_RS08600	PWY-6344	L-ornithine degradation II (Stickland reaction)
AYJ52_RS08710	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AYJ52_RS08710	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AYJ52_RS08730	PWY-5958	acridone alkaloid biosynthesis
AYJ52_RS08730	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AYJ52_RS08730	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AYJ52_RS08780	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
AYJ52_RS08780	PWY-5368	dimorphecolate biosynthesis
AYJ52_RS08780	PWY-5995	linoleate biosynthesis I (plants)
AYJ52_RS08780	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
AYJ52_RS08780	PWY-6803	phosphatidylcholine acyl editing
AYJ52_RS08780	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
AYJ52_RS08780	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
AYJ52_RS08780	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
AYJ52_RS08780	PWY-7470	phosphatidylcholine biosynthesis VII
AYJ52_RS08780	PWY-7618	ricinoleate biosynthesis
AYJ52_RS08795	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AYJ52_RS08805	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AYJ52_RS08805	PWY-5723	Rubisco shunt
AYJ52_RS08845	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AYJ52_RS08850	PWY-5316	nicotine biosynthesis
AYJ52_RS08850	PWY-7342	superpathway of nicotine biosynthesis
AYJ52_RS08875	PWY-6609	adenine and adenosine salvage III
AYJ52_RS08875	PWY-6611	adenine and adenosine salvage V
AYJ52_RS08875	PWY-7179	purine deoxyribonucleosides degradation I
AYJ52_RS08875	PWY-7179-1	purine deoxyribonucleosides degradation
AYJ52_RS09005	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AYJ52_RS09005	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AYJ52_RS09005	PWY-6936	seleno-amino acid biosynthesis
AYJ52_RS09005	PWY-702	L-methionine biosynthesis II
AYJ52_RS09105	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AYJ52_RS09105	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AYJ52_RS09105	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AYJ52_RS09105	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AYJ52_RS09105	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AYJ52_RS09105	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AYJ52_RS09105	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AYJ52_RS09105	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AYJ52_RS09110	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AYJ52_RS09110	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AYJ52_RS09110	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AYJ52_RS09110	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AYJ52_RS09110	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AYJ52_RS09110	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AYJ52_RS09110	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AYJ52_RS09110	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AYJ52_RS09200	PWY-7183	pyrimidine nucleobases salvage I
AYJ52_RS09305	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AYJ52_RS09355	PWY-3961	phosphopantothenate biosynthesis II
AYJ52_RS09425	PWY-2201	folate transformations I
AYJ52_RS09425	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AYJ52_RS09430	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
AYJ52_RS09470	PWY-4381	fatty acid biosynthesis initiation I
AYJ52_RS09470	PWY-6799	fatty acid biosynthesis (plant mitochondria)
AYJ52_RS09470	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AYJ52_RS09475	PWY-5367	petroselinate biosynthesis
AYJ52_RS09475	PWY-5515	L-arabinose degradation II
AYJ52_RS09475	PWY-5525	D-glucuronate degradation I
AYJ52_RS09475	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AYJ52_RS09475	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AYJ52_RS09475	PWY-5989	stearate biosynthesis II (bacteria and plants)
AYJ52_RS09475	PWY-5994	palmitate biosynthesis I (animals and fungi)
AYJ52_RS09475	PWY-6113	superpathway of mycolate biosynthesis
AYJ52_RS09475	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AYJ52_RS09475	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AYJ52_RS09475	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AYJ52_RS09475	PWY-7663	gondoate biosynthesis (anaerobic)
AYJ52_RS09475	PWY-7664	oleate biosynthesis IV (anaerobic)
AYJ52_RS09475	PWYG-321	mycolate biosynthesis
AYJ52_RS09500	PWY-6167	flavin biosynthesis II (archaea)
AYJ52_RS09500	PWY-6168	flavin biosynthesis III (fungi)
AYJ52_RS09515	PWY-5155	&beta;-alanine biosynthesis III
AYJ52_RS09520	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
AYJ52_RS09555	PWY-7560	methylerythritol phosphate pathway II
AYJ52_RS09570	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AYJ52_RS09675	PWY-5381	pyridine nucleotide cycling (plants)
AYJ52_RS09675	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
AYJ52_RS09800	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AYJ52_RS09800	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AYJ52_RS09800	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AYJ52_RS09800	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
AYJ52_RS09805	PWY-6749	CMP-legionaminate biosynthesis I
AYJ52_RS09810	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AYJ52_RS09810	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AYJ52_RS09860	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AYJ52_RS09900	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AYJ52_RS09900	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AYJ52_RS09920	PWY-4041	&gamma;-glutamyl cycle
AYJ52_RS09920	PWY-5826	hypoglycin biosynthesis
AYJ52_RS10055	PWY-7254	TCA cycle VII (acetate-producers)
AYJ52_RS10060	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
AYJ52_RS10060	PWY-7494	choline degradation IV
AYJ52_RS10065	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
AYJ52_RS10065	PWY-7494	choline degradation IV
AYJ52_RS10255	PWY-6317	galactose degradation I (Leloir pathway)
AYJ52_RS10280	PWY-6891	thiazole biosynthesis II (Bacillus)
AYJ52_RS10280	PWY-6892	thiazole biosynthesis I (E. coli)
AYJ52_RS10280	PWY-7560	methylerythritol phosphate pathway II
AYJ52_RS10295	PWY-2201	folate transformations I
AYJ52_RS10295	PWY-3841	folate transformations II
AYJ52_RS10350	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AYJ52_RS10350	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AYJ52_RS10350	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AYJ52_RS10350	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AYJ52_RS10430	PWY-5278	sulfite oxidation III
AYJ52_RS10430	PWY-5340	sulfate activation for sulfonation
AYJ52_RS10430	PWY-6683	sulfate reduction III (assimilatory)
AYJ52_RS10430	PWY-6932	selenate reduction
AYJ52_RS10435	PWY-5278	sulfite oxidation III
AYJ52_RS10435	PWY-5340	sulfate activation for sulfonation
AYJ52_RS10435	PWY-6683	sulfate reduction III (assimilatory)
AYJ52_RS10435	PWY-6932	selenate reduction
AYJ52_RS10465	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AYJ52_RS10485	PWY-5704	urea degradation II
AYJ52_RS10490	PWY-5704	urea degradation II
AYJ52_RS10495	PWY-5704	urea degradation II
AYJ52_RS10520	PWY-6825	phosphatidylcholine biosynthesis V
AYJ52_RS10540	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AYJ52_RS10570	PWY-6825	phosphatidylcholine biosynthesis V
AYJ52_RS10660	PWY-2201	folate transformations I
AYJ52_RS10680	PWY-5381	pyridine nucleotide cycling (plants)
AYJ52_RS10755	PWY-5686	UMP biosynthesis
AYJ52_RS10765	PWY-4983	L-citrulline-nitric oxide cycle
AYJ52_RS10765	PWY-4984	urea cycle
AYJ52_RS10765	PWY-5	canavanine biosynthesis
AYJ52_RS10765	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AYJ52_RS10765	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AYJ52_RS10865	PWY-2	putrescine degradation IV
AYJ52_RS10865	PWY-3	putrescine degradation V
AYJ52_RS10935	PWY-6497	D-galactarate degradation II
AYJ52_RS10945	PWY-1042	glycolysis IV (plant cytosol)
AYJ52_RS10945	PWY-1622	formaldehyde assimilation I (serine pathway)
AYJ52_RS10945	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AYJ52_RS10945	PWY-5484	glycolysis II (from fructose 6-phosphate)
AYJ52_RS10945	PWY-5723	Rubisco shunt
AYJ52_RS10945	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AYJ52_RS10945	PWY-6499	D-glucarate degradation II
AYJ52_RS10945	PWY-6886	1-butanol autotrophic biosynthesis
AYJ52_RS10945	PWY-6901	superpathway of glucose and xylose degradation
AYJ52_RS10945	PWY-7003	glycerol degradation to butanol
AYJ52_RS10945	PWY-7124	ethylene biosynthesis V (engineered)
AYJ52_RS10945	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AYJ52_RS10950	PWY-6486	D-galacturonate degradation II
AYJ52_RS10950	PWY-6497	D-galactarate degradation II
AYJ52_RS10950	PWY-6499	D-glucarate degradation II
AYJ52_RS10950	PWY-6501	D-glucuronate degradation II
AYJ52_RS10965	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
AYJ52_RS11125	PWY-6610	adenine and adenosine salvage IV
AYJ52_RS11150	PWY-2941	L-lysine biosynthesis II
AYJ52_RS11150	PWY-2942	L-lysine biosynthesis III
AYJ52_RS11150	PWY-5097	L-lysine biosynthesis VI
AYJ52_RS11150	PWY-6559	spermidine biosynthesis II
AYJ52_RS11150	PWY-6562	norspermidine biosynthesis
AYJ52_RS11150	PWY-7153	grixazone biosynthesis
AYJ52_RS11175	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AYJ52_RS11230	PWY-6825	phosphatidylcholine biosynthesis V
AYJ52_RS11240	PWY-5686	UMP biosynthesis
AYJ52_RS11320	PWY-4381	fatty acid biosynthesis initiation I
AYJ52_RS11375	PWY-5418	phenol degradation I (aerobic)
AYJ52_RS11395	PWY-5418	phenol degradation I (aerobic)
AYJ52_RS11420	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AYJ52_RS11505	PWY-3341	L-proline biosynthesis III
AYJ52_RS11505	PWY-4981	L-proline biosynthesis II (from arginine)
AYJ52_RS11505	PWY-6344	L-ornithine degradation II (Stickland reaction)
AYJ52_RS11655	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AYJ52_RS11655	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AYJ52_RS11720	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AYJ52_RS11945	PWY-1361	benzoyl-CoA degradation I (aerobic)
AYJ52_RS11945	PWY-5109	2-methylbutanoate biosynthesis
AYJ52_RS11945	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AYJ52_RS11945	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AYJ52_RS11945	PWY-5177	glutaryl-CoA degradation
AYJ52_RS11945	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AYJ52_RS11945	PWY-6435	4-hydroxybenzoate biosynthesis V
AYJ52_RS11945	PWY-6583	pyruvate fermentation to butanol I
AYJ52_RS11945	PWY-6863	pyruvate fermentation to hexanol
AYJ52_RS11945	PWY-6883	pyruvate fermentation to butanol II
AYJ52_RS11945	PWY-6944	androstenedione degradation
AYJ52_RS11945	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AYJ52_RS11945	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AYJ52_RS11945	PWY-7007	methyl ketone biosynthesis
AYJ52_RS11945	PWY-7046	4-coumarate degradation (anaerobic)
AYJ52_RS11945	PWY-7094	fatty acid salvage
AYJ52_RS11945	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AYJ52_RS11945	PWY-735	jasmonic acid biosynthesis
AYJ52_RS11945	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AYJ52_RS11945	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AYJ52_RS11945	PWY-7726	AYJ52_RS11945
AYJ52_RS11965	PWY-5169	cyanurate degradation
AYJ52_RS11965	PWY-5703	urea degradation I
AYJ52_RS11985	PWY-5169	cyanurate degradation
AYJ52_RS11985	PWY-5703	urea degradation I
AYJ52_RS11985	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AYJ52_RS12165	PWY-5176	coumarin biosynthesis (via 2-coumarate)
AYJ52_RS12200	PWY-1361	benzoyl-CoA degradation I (aerobic)
AYJ52_RS12200	PWY-5109	2-methylbutanoate biosynthesis
AYJ52_RS12200	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AYJ52_RS12200	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AYJ52_RS12200	PWY-5177	glutaryl-CoA degradation
AYJ52_RS12200	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AYJ52_RS12200	PWY-6435	4-hydroxybenzoate biosynthesis V
AYJ52_RS12200	PWY-6583	pyruvate fermentation to butanol I
AYJ52_RS12200	PWY-6863	pyruvate fermentation to hexanol
AYJ52_RS12200	PWY-6883	pyruvate fermentation to butanol II
AYJ52_RS12200	PWY-6944	androstenedione degradation
AYJ52_RS12200	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AYJ52_RS12200	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AYJ52_RS12200	PWY-7007	methyl ketone biosynthesis
AYJ52_RS12200	PWY-7046	4-coumarate degradation (anaerobic)
AYJ52_RS12200	PWY-7094	fatty acid salvage
AYJ52_RS12200	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AYJ52_RS12200	PWY-735	jasmonic acid biosynthesis
AYJ52_RS12200	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AYJ52_RS12200	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AYJ52_RS12200	PWY-7726	AYJ52_RS12200
AYJ52_RS12205	PWY-1361	benzoyl-CoA degradation I (aerobic)
AYJ52_RS12205	PWY-2361	3-oxoadipate degradation
AYJ52_RS12205	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
AYJ52_RS12210	PWY-1341	phenylacetate degradation II (anaerobic)
AYJ52_RS12210	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
AYJ52_RS12210	PWY-7716	AYJ52_RS12210
AYJ52_RS12265	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AYJ52_RS12295	PWY-6832	2-aminoethylphosphonate degradation II
AYJ52_RS12330	PWY-723	alkylnitronates degradation
AYJ52_RS12350	PWY-1361	benzoyl-CoA degradation I (aerobic)
AYJ52_RS12350	PWY-5109	2-methylbutanoate biosynthesis
AYJ52_RS12350	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AYJ52_RS12350	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AYJ52_RS12350	PWY-5177	glutaryl-CoA degradation
AYJ52_RS12350	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AYJ52_RS12350	PWY-6435	4-hydroxybenzoate biosynthesis V
AYJ52_RS12350	PWY-6583	pyruvate fermentation to butanol I
AYJ52_RS12350	PWY-6863	pyruvate fermentation to hexanol
AYJ52_RS12350	PWY-6883	pyruvate fermentation to butanol II
AYJ52_RS12350	PWY-6944	androstenedione degradation
AYJ52_RS12350	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AYJ52_RS12350	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AYJ52_RS12350	PWY-7007	methyl ketone biosynthesis
AYJ52_RS12350	PWY-7046	4-coumarate degradation (anaerobic)
AYJ52_RS12350	PWY-7094	fatty acid salvage
AYJ52_RS12350	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AYJ52_RS12350	PWY-735	jasmonic acid biosynthesis
AYJ52_RS12350	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AYJ52_RS12350	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AYJ52_RS12350	PWY-7726	AYJ52_RS12350
AYJ52_RS12435	PWY-4381	fatty acid biosynthesis initiation I
AYJ52_RS12435	PWY-5743	3-hydroxypropanoate cycle
AYJ52_RS12435	PWY-5744	glyoxylate assimilation
AYJ52_RS12435	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AYJ52_RS12435	PWY-6679	jadomycin biosynthesis
AYJ52_RS12435	PWY-6722	candicidin biosynthesis
AYJ52_RS12435	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AYJ52_RS12615	PWY-6823	molybdenum cofactor biosynthesis
AYJ52_RS12615	PWY-6891	thiazole biosynthesis II (Bacillus)
AYJ52_RS12615	PWY-6892	thiazole biosynthesis I (E. coli)
AYJ52_RS12615	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AYJ52_RS12625	PWY-6936	seleno-amino acid biosynthesis
AYJ52_RS12625	PWY-7274	D-cycloserine biosynthesis
AYJ52_RS12700	PWY-5794	malonate degradation I (biotin-independent)
AYJ52_RS12700	PWY-6060	malonate degradation II (biotin-dependent)
AYJ52_RS12705	PWY-5796	malonate decarboxylase activation
AYJ52_RS12715	PWY-4381	fatty acid biosynthesis initiation I
AYJ52_RS12715	PWY-5743	3-hydroxypropanoate cycle
AYJ52_RS12715	PWY-5744	glyoxylate assimilation
AYJ52_RS12715	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AYJ52_RS12715	PWY-6060	malonate degradation II (biotin-dependent)
AYJ52_RS12715	PWY-6679	jadomycin biosynthesis
AYJ52_RS12715	PWY-6722	candicidin biosynthesis
AYJ52_RS12715	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AYJ52_RS12720	PWY-4381	fatty acid biosynthesis initiation I
AYJ52_RS12720	PWY-5743	3-hydroxypropanoate cycle
AYJ52_RS12720	PWY-5744	glyoxylate assimilation
AYJ52_RS12720	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AYJ52_RS12720	PWY-6060	malonate degradation II (biotin-dependent)
AYJ52_RS12720	PWY-6679	jadomycin biosynthesis
AYJ52_RS12720	PWY-6722	candicidin biosynthesis
AYJ52_RS12720	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AYJ52_RS12725	PWY-5796	malonate decarboxylase activation
AYJ52_RS12730	PWY-4381	fatty acid biosynthesis initiation I
AYJ52_RS12730	PWY-6799	fatty acid biosynthesis (plant mitochondria)
AYJ52_RS12730	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AYJ52_RS12815	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AYJ52_RS12815	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AYJ52_RS12845	PWY-4202	arsenate detoxification I (glutaredoxin)
AYJ52_RS12845	PWY-4621	arsenate detoxification II (glutaredoxin)
AYJ52_RS12900	PWY-6936	seleno-amino acid biosynthesis
AYJ52_RS12900	PWY-7274	D-cycloserine biosynthesis
AYJ52_RS12905	PWY-6004	glycine betaine biosynthesis V (from glycine)
AYJ52_RS13205	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
AYJ52_RS13210	PWY-6700	queuosine biosynthesis
AYJ52_RS13215	PWY-6938	NADH repair
AYJ52_RS13255	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AYJ52_RS13255	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
AYJ52_RS13260	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AYJ52_RS13260	PWY-5723	Rubisco shunt
AYJ52_RS13260	PWY-6891	thiazole biosynthesis II (Bacillus)
AYJ52_RS13260	PWY-6892	thiazole biosynthesis I (E. coli)
AYJ52_RS13260	PWY-6901	superpathway of glucose and xylose degradation
AYJ52_RS13260	PWY-7560	methylerythritol phosphate pathway II
AYJ52_RS13300	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
AYJ52_RS13300	PWY-6853	ethylene biosynthesis II (microbes)
AYJ52_RS13300	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AYJ52_RS13380	PWY-1042	glycolysis IV (plant cytosol)
AYJ52_RS13380	PWY-5484	glycolysis II (from fructose 6-phosphate)
AYJ52_RS13380	PWY-6886	1-butanol autotrophic biosynthesis
AYJ52_RS13380	PWY-6901	superpathway of glucose and xylose degradation
AYJ52_RS13380	PWY-7003	glycerol degradation to butanol
AYJ52_RS13390	PWY-1042	glycolysis IV (plant cytosol)
AYJ52_RS13390	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AYJ52_RS13390	PWY-5484	glycolysis II (from fructose 6-phosphate)
AYJ52_RS13390	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AYJ52_RS13390	PWY-7385	1,3-propanediol biosynthesis (engineered)
AYJ52_RS13450	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AYJ52_RS13520	PWY-7205	CMP phosphorylation
AYJ52_RS13540	PWY-5686	UMP biosynthesis
AYJ52_RS13565	PWY-6728	methylaspartate cycle
AYJ52_RS13565	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AYJ52_RS13565	PWY-7118	chitin degradation to ethanol
AYJ52_RS13565	PWY-7294	xylose degradation IV
AYJ52_RS13565	PWY-7295	L-arabinose degradation IV
AYJ52_RS13720	PWY-6823	molybdenum cofactor biosynthesis
AYJ52_RS13720	PWY-6891	thiazole biosynthesis II (Bacillus)
AYJ52_RS13720	PWY-6892	thiazole biosynthesis I (E. coli)
AYJ52_RS13720	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AYJ52_RS13800	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AYJ52_RS13800	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AYJ52_RS13800	PWY-6269	adenosylcobalamin salvage from cobinamide II
AYJ52_RS13805	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AYJ52_RS13805	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AYJ52_RS13805	PWY-6269	adenosylcobalamin salvage from cobinamide II
AYJ52_RS13820	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AYJ52_RS13820	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AYJ52_RS13820	PWY-6269	adenosylcobalamin salvage from cobinamide II
AYJ52_RS13825	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AYJ52_RS13825	PWY-6164	3-dehydroquinate biosynthesis I
AYJ52_RS13825	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AYJ52_RS13855	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
AYJ52_RS13855	PWY-622	starch biosynthesis
AYJ52_RS13975	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AYJ52_RS14000	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AYJ52_RS14000	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AYJ52_RS14020	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
AYJ52_RS14020	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AYJ52_RS14025	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AYJ52_RS14100	PWY-5392	reductive TCA cycle II
AYJ52_RS14100	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AYJ52_RS14100	PWY-5690	TCA cycle II (plants and fungi)
AYJ52_RS14100	PWY-5913	TCA cycle VI (obligate autotrophs)
AYJ52_RS14100	PWY-6728	methylaspartate cycle
AYJ52_RS14100	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AYJ52_RS14100	PWY-7254	TCA cycle VII (acetate-producers)
AYJ52_RS14100	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AYJ52_RS14235	PWY-2421	indole-3-acetate degradation VIII (bacterial)
AYJ52_RS14235	PWY-5648	2-nitrobenzoate degradation II
AYJ52_RS14235	PWY-6079	anthranilate degradation I (aerobic)
AYJ52_RS14240	PWY-2421	indole-3-acetate degradation VIII (bacterial)
AYJ52_RS14240	PWY-5648	2-nitrobenzoate degradation II
AYJ52_RS14240	PWY-6079	anthranilate degradation I (aerobic)
AYJ52_RS14265	PWY-5901	2,3-dihydroxybenzoate biosynthesis
AYJ52_RS14270	PWY-5901	2,3-dihydroxybenzoate biosynthesis
AYJ52_RS14300	PWY-6420	pyrroloquinoline quinone biosynthesis
AYJ52_RS14310	PWY-6823	molybdenum cofactor biosynthesis
AYJ52_RS14315	PWY-7533	gliotoxin biosynthesis
AYJ52_RS14355	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AYJ52_RS14385	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AYJ52_RS14385	PWY-3162	L-tryptophan degradation V (side chain pathway)
AYJ52_RS14385	PWY-5057	L-valine degradation II
AYJ52_RS14385	PWY-5076	L-leucine degradation III
AYJ52_RS14385	PWY-5078	L-isoleucine degradation II
AYJ52_RS14385	PWY-5079	L-phenylalanine degradation III
AYJ52_RS14385	PWY-5082	L-methionine degradation III
AYJ52_RS14385	PWY-5480	pyruvate fermentation to ethanol I
AYJ52_RS14385	PWY-5486	pyruvate fermentation to ethanol II
AYJ52_RS14385	PWY-5751	phenylethanol biosynthesis
AYJ52_RS14385	PWY-6313	serotonin degradation
AYJ52_RS14385	PWY-6333	acetaldehyde biosynthesis I
AYJ52_RS14385	PWY-6342	noradrenaline and adrenaline degradation
AYJ52_RS14385	PWY-6454	vancomycin resistance I
AYJ52_RS14385	PWY-6587	pyruvate fermentation to ethanol III
AYJ52_RS14385	PWY-6802	salidroside biosynthesis
AYJ52_RS14385	PWY-6871	3-methylbutanol biosynthesis
AYJ52_RS14385	PWY-6901	superpathway of glucose and xylose degradation
AYJ52_RS14385	PWY-7013	L-1,2-propanediol degradation
AYJ52_RS14385	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AYJ52_RS14385	PWY-7118	chitin degradation to ethanol
AYJ52_RS14385	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AYJ52_RS14535	PWY-5381	pyridine nucleotide cycling (plants)
AYJ52_RS14535	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AYJ52_RS14535	PWY-6596	adenosine nucleotides degradation I
AYJ52_RS14535	PWY-6606	guanosine nucleotides degradation II
AYJ52_RS14535	PWY-6607	guanosine nucleotides degradation I
AYJ52_RS14535	PWY-6608	guanosine nucleotides degradation III
AYJ52_RS14535	PWY-7185	UTP and CTP dephosphorylation I
AYJ52_RS14570	PWY-2201	folate transformations I
AYJ52_RS14570	PWY-3841	folate transformations II
AYJ52_RS14580	PWY-5381	pyridine nucleotide cycling (plants)
AYJ52_RS14650	PWY-5101	L-isoleucine biosynthesis II
AYJ52_RS14650	PWY-5103	L-isoleucine biosynthesis III
AYJ52_RS14650	PWY-5104	L-isoleucine biosynthesis IV
AYJ52_RS14650	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AYJ52_RS14715	PWY-5642	2,4-dinitrotoluene degradation
AYJ52_RS14715	PWY-6373	acrylate degradation
AYJ52_RS14950	PWY-5451	acetone degradation I (to methylglyoxal)
AYJ52_RS14950	PWY-6588	pyruvate fermentation to acetone
AYJ52_RS14950	PWY-6876	isopropanol biosynthesis
AYJ52_RS14950	PWY-7466	acetone degradation III (to propane-1,2-diol)
AYJ52_RS14970	PWY-5101	L-isoleucine biosynthesis II
AYJ52_RS14970	PWY-5103	L-isoleucine biosynthesis III
AYJ52_RS14970	PWY-5104	L-isoleucine biosynthesis IV
AYJ52_RS14970	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AYJ52_RS14990	PWY-1042	glycolysis IV (plant cytosol)
AYJ52_RS14990	PWY-1622	formaldehyde assimilation I (serine pathway)
AYJ52_RS14990	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AYJ52_RS14990	PWY-5484	glycolysis II (from fructose 6-phosphate)
AYJ52_RS14990	PWY-5723	Rubisco shunt
AYJ52_RS14990	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AYJ52_RS14990	PWY-6886	1-butanol autotrophic biosynthesis
AYJ52_RS14990	PWY-6901	superpathway of glucose and xylose degradation
AYJ52_RS14990	PWY-7003	glycerol degradation to butanol
AYJ52_RS14990	PWY-7124	ethylene biosynthesis V (engineered)
AYJ52_RS14990	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AYJ52_RS14995	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
AYJ52_RS15015	PWY-1361	benzoyl-CoA degradation I (aerobic)
AYJ52_RS15015	PWY-2361	3-oxoadipate degradation
AYJ52_RS15015	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
AYJ52_RS15020	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
AYJ52_RS15035	PWY-5751	phenylethanol biosynthesis
AYJ52_RS15085	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AYJ52_RS15180	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AYJ52_RS15180	PWY-6416	quinate degradation II
AYJ52_RS15180	PWY-6707	gallate biosynthesis
AYJ52_RS15205	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
AYJ52_RS15210	PWY-6123	inosine-5'-phosphate biosynthesis I
AYJ52_RS15210	PWY-6124	inosine-5'-phosphate biosynthesis II
AYJ52_RS15210	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AYJ52_RS15210	PWY-7234	inosine-5'-phosphate biosynthesis III
AYJ52_RS15215	PWY-1361	benzoyl-CoA degradation I (aerobic)
AYJ52_RS15215	PWY-2361	3-oxoadipate degradation
AYJ52_RS15215	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
AYJ52_RS15230	PWY-7560	methylerythritol phosphate pathway II
AYJ52_RS15270	PWY-1042	glycolysis IV (plant cytosol)
AYJ52_RS15270	PWY-1622	formaldehyde assimilation I (serine pathway)
AYJ52_RS15270	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AYJ52_RS15270	PWY-5484	glycolysis II (from fructose 6-phosphate)
AYJ52_RS15270	PWY-5723	Rubisco shunt
AYJ52_RS15270	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AYJ52_RS15270	PWY-6886	1-butanol autotrophic biosynthesis
AYJ52_RS15270	PWY-6901	superpathway of glucose and xylose degradation
AYJ52_RS15270	PWY-7003	glycerol degradation to butanol
AYJ52_RS15270	PWY-7124	ethylene biosynthesis V (engineered)
AYJ52_RS15270	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AYJ52_RS15275	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AYJ52_RS15275	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AYJ52_RS15280	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
AYJ52_RS15280	PWY-7177	UTP and CTP dephosphorylation II
AYJ52_RS15280	PWY-7185	UTP and CTP dephosphorylation I
AYJ52_RS15325	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AYJ52_RS15325	PWY-6164	3-dehydroquinate biosynthesis I
AYJ52_RS15325	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AYJ52_RS15350	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AYJ52_RS15350	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AYJ52_RS15365	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AYJ52_RS15365	PWY-5723	Rubisco shunt
AYJ52_RS15385	PWY-6803	phosphatidylcholine acyl editing
AYJ52_RS15385	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
AYJ52_RS15385	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
AYJ52_RS15385	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
AYJ52_RS15425	PWY-7545	pyruvate to cytochrome <i>bd</i> terminal oxidase electron transfer
AYJ52_RS15565	PWY-7165	L-ascorbate biosynthesis VI (engineered pathway)
AYJ52_RS15600	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
AYJ52_RS15600	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
AYJ52_RS15655	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AYJ52_RS15655	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AYJ52_RS15655	PWY-5989	stearate biosynthesis II (bacteria and plants)
AYJ52_RS15655	PWY-5994	palmitate biosynthesis I (animals and fungi)
AYJ52_RS15655	PWY-6113	superpathway of mycolate biosynthesis
AYJ52_RS15655	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AYJ52_RS15655	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AYJ52_RS15655	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AYJ52_RS15655	PWY-7663	gondoate biosynthesis (anaerobic)
AYJ52_RS15655	PWY-7664	oleate biosynthesis IV (anaerobic)
AYJ52_RS15655	PWYG-321	mycolate biosynthesis
AYJ52_RS15680	PWY-7294	xylose degradation IV
AYJ52_RS15680	PWY-7295	L-arabinose degradation IV
AYJ52_RS15680	PWY-7560	methylerythritol phosphate pathway II
AYJ52_RS15685	PWY-5667	CDP-diacylglycerol biosynthesis I
AYJ52_RS15685	PWY-5981	CDP-diacylglycerol biosynthesis III
AYJ52_RS15725	PWY-4981	L-proline biosynthesis II (from arginine)
AYJ52_RS15725	PWY-4984	urea cycle
AYJ52_RS15725	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AYJ52_RS15735	PWY-7560	methylerythritol phosphate pathway II
AYJ52_RS15790	PWY-5392	reductive TCA cycle II
AYJ52_RS15790	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AYJ52_RS15790	PWY-5690	TCA cycle II (plants and fungi)
AYJ52_RS15790	PWY-5913	TCA cycle VI (obligate autotrophs)
AYJ52_RS15790	PWY-6728	methylaspartate cycle
AYJ52_RS15790	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AYJ52_RS15790	PWY-7254	TCA cycle VII (acetate-producers)
AYJ52_RS15790	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AYJ52_RS15795	PWY-3821	galactose degradation III
AYJ52_RS15795	PWY-6317	galactose degradation I (Leloir pathway)
AYJ52_RS15795	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
AYJ52_RS15795	PWY-6527	stachyose degradation
AYJ52_RS15795	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
AYJ52_RS15795	PWY-7344	UDP-D-galactose biosynthesis
AYJ52_RS15835	PWY-6823	molybdenum cofactor biosynthesis
AYJ52_RS15845	PWY-6823	molybdenum cofactor biosynthesis
AYJ52_RS15855	PWY-6823	molybdenum cofactor biosynthesis
AYJ52_RS15880	PWY-6683	sulfate reduction III (assimilatory)
AYJ52_RS15940	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AYJ52_RS15940	PWY-6416	quinate degradation II
AYJ52_RS15940	PWY-6707	gallate biosynthesis
AYJ52_RS16015	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AYJ52_RS16015	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AYJ52_RS16115	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AYJ52_RS16115	PWY-5723	Rubisco shunt
AYJ52_RS16285	PWY-3461	L-tyrosine biosynthesis II
AYJ52_RS16285	PWY-3462	L-phenylalanine biosynthesis II
AYJ52_RS16285	PWY-6120	L-tyrosine biosynthesis III
AYJ52_RS16285	PWY-6627	salinosporamide A biosynthesis
AYJ52_RS16285	PWY-7626	bacilysin biosynthesis
AYJ52_RS16340	PWY-6897	thiamin salvage II
AYJ52_RS16340	PWY-7356	thiamin salvage IV (yeast)
AYJ52_RS16340	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AYJ52_RS16395	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AYJ52_RS16430	PWY-2781	<i>cis</i>-zeatin biosynthesis
AYJ52_RS16505	PWY-5747	2-methylcitrate cycle II
AYJ52_RS16545	PWY-381	nitrate reduction II (assimilatory)
AYJ52_RS16545	PWY-5675	nitrate reduction V (assimilatory)
AYJ52_RS16545	PWY-6549	L-glutamine biosynthesis III
AYJ52_RS16545	PWY-6963	ammonia assimilation cycle I
AYJ52_RS16545	PWY-6964	ammonia assimilation cycle II
AYJ52_RS16575	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AYJ52_RS16575	PWY-6148	tetrahydromethanopterin biosynthesis
AYJ52_RS16575	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AYJ52_RS16575	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AYJ52_RS16580	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AYJ52_RS16580	PWY-6148	tetrahydromethanopterin biosynthesis
AYJ52_RS16580	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AYJ52_RS16580	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AYJ52_RS16695	PWY-5484	glycolysis II (from fructose 6-phosphate)
AYJ52_RS16710	PWY-3781	aerobic respiration I (cytochrome c)
AYJ52_RS16710	PWY-4521	arsenite oxidation I (respiratory)
AYJ52_RS16710	PWY-6692	Fe(II) oxidation
AYJ52_RS16710	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AYJ52_RS16710	PWY-7544	pyruvate to cytochrome <i>bo</i> oxidase electron transfer
AYJ52_RS16750	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AYJ52_RS16805	PWY-6123	inosine-5'-phosphate biosynthesis I
AYJ52_RS16805	PWY-6124	inosine-5'-phosphate biosynthesis II
AYJ52_RS16805	PWY-7234	inosine-5'-phosphate biosynthesis III
AYJ52_RS16810	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AYJ52_RS16810	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AYJ52_RS16810	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AYJ52_RS16830	PWY-5386	methylglyoxal degradation I
AYJ52_RS16920	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AYJ52_RS16920	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AYJ52_RS16995	PWY-5691	urate degradation to allantoin I
AYJ52_RS16995	PWY-7394	urate degradation to allantoin II
AYJ52_RS17025	PWY-5913	TCA cycle VI (obligate autotrophs)
AYJ52_RS17025	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
AYJ52_RS17025	PWY-6638	sulfolactate degradation III
AYJ52_RS17025	PWY-6642	(<i>R</i>)-cysteate degradation
AYJ52_RS17025	PWY-6643	coenzyme M biosynthesis II
AYJ52_RS17025	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AYJ52_RS17025	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AYJ52_RS17025	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AYJ52_RS17160	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
AYJ52_RS17160	PWY-5368	dimorphecolate biosynthesis
AYJ52_RS17160	PWY-5995	linoleate biosynthesis I (plants)
AYJ52_RS17160	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
AYJ52_RS17160	PWY-6803	phosphatidylcholine acyl editing
AYJ52_RS17160	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
AYJ52_RS17160	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
AYJ52_RS17160	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
AYJ52_RS17160	PWY-7470	phosphatidylcholine biosynthesis VII
AYJ52_RS17160	PWY-7618	ricinoleate biosynthesis
AYJ52_RS17195	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AYJ52_RS17195	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AYJ52_RS17195	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AYJ52_RS17195	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AYJ52_RS17205	PWY-5686	UMP biosynthesis
AYJ52_RS17225	PWY-5667	CDP-diacylglycerol biosynthesis I
AYJ52_RS17225	PWY-5981	CDP-diacylglycerol biosynthesis III
AYJ52_RS17270	PWY-6891	thiazole biosynthesis II (Bacillus)
AYJ52_RS17270	PWY-6892	thiazole biosynthesis I (E. coli)
AYJ52_RS17330	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AYJ52_RS17330	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
AYJ52_RS17335	PWY-3461	L-tyrosine biosynthesis II
AYJ52_RS17335	PWY-3462	L-phenylalanine biosynthesis II
AYJ52_RS17335	PWY-6120	L-tyrosine biosynthesis III
AYJ52_RS17335	PWY-6627	salinosporamide A biosynthesis
AYJ52_RS17335	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
AYJ52_RS17335	PWY-7626	bacilysin biosynthesis
AYJ52_RS17370	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AYJ52_RS17370	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AYJ52_RS17370	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
AYJ52_RS17375	PWY-1001	cellulose biosynthesis
AYJ52_RS17375	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AYJ52_RS17375	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AYJ52_RS17375	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AYJ52_RS17375	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AYJ52_RS17385	PWY-6502	oxidized GTP and dGTP detoxification
AYJ52_RS17385	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AYJ52_RS17385	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AYJ52_RS17385	PWY-6897	thiamin salvage II
AYJ52_RS17385	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
AYJ52_RS17385	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
AYJ52_RS17385	PWY-7356	thiamin salvage IV (yeast)
AYJ52_RS17385	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AYJ52_RS17495	PWY-1622	formaldehyde assimilation I (serine pathway)
AYJ52_RS17495	PWY-181	photorespiration
AYJ52_RS17495	PWY-2161	folate polyglutamylation
AYJ52_RS17495	PWY-2201	folate transformations I
AYJ52_RS17495	PWY-3661	glycine betaine degradation I
AYJ52_RS17495	PWY-3661-1	glycine betaine degradation II (mammalian)
AYJ52_RS17495	PWY-3841	folate transformations II
AYJ52_RS17495	PWY-5497	purine nucleobases degradation II (anaerobic)
AYJ52_RS17500	PWY-6857	retinol biosynthesis
AYJ52_RS17530	PWY-6700	queuosine biosynthesis
AYJ52_RS17615	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AYJ52_RS17615	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AYJ52_RS17635	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AYJ52_RS17640	PWY-2201	folate transformations I
AYJ52_RS17640	PWY-3841	folate transformations II
AYJ52_RS17645	PWY-2201	folate transformations I
AYJ52_RS17655	PWY-1281	sulfoacetaldehyde degradation I
AYJ52_RS17655	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AYJ52_RS17655	PWY-5482	pyruvate fermentation to acetate II
AYJ52_RS17655	PWY-5485	pyruvate fermentation to acetate IV
AYJ52_RS17655	PWY-5497	purine nucleobases degradation II (anaerobic)
AYJ52_RS17655	PWY-6637	sulfolactate degradation II
AYJ52_RS17655	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AYJ52_RS17675	PWY-6854	ethylene biosynthesis III (microbes)
AYJ52_RS17705	PWY-6857	retinol biosynthesis
AYJ52_RS17715	PWY-5755	4-hydroxybenzoate biosynthesis II (microbes)
AYJ52_RS17715	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
AYJ52_RS17715	PWY-6148	tetrahydromethanopterin biosynthesis
AYJ52_RS17720	PWY-381	nitrate reduction II (assimilatory)
AYJ52_RS17720	PWY-5675	nitrate reduction V (assimilatory)
AYJ52_RS17720	PWY-6549	L-glutamine biosynthesis III
AYJ52_RS17720	PWY-6963	ammonia assimilation cycle I
AYJ52_RS17720	PWY-6964	ammonia assimilation cycle II
AYJ52_RS17735	PWY-5958	acridone alkaloid biosynthesis
AYJ52_RS17735	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AYJ52_RS17735	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AYJ52_RS17770	PWY-5497	purine nucleobases degradation II (anaerobic)
AYJ52_RS17770	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AYJ52_RS17770	PWY-6538	caffeine degradation III (bacteria, via demethylation)
AYJ52_RS17770	PWY-6596	adenosine nucleotides degradation I
AYJ52_RS17770	PWY-6606	guanosine nucleotides degradation II
AYJ52_RS17770	PWY-6607	guanosine nucleotides degradation I
AYJ52_RS17770	PWY-6608	guanosine nucleotides degradation III
AYJ52_RS17770	PWY-6999	theophylline degradation
AYJ52_RS17775	PWY-5497	purine nucleobases degradation II (anaerobic)
AYJ52_RS17775	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AYJ52_RS17775	PWY-6538	caffeine degradation III (bacteria, via demethylation)
AYJ52_RS17775	PWY-6596	adenosine nucleotides degradation I
AYJ52_RS17775	PWY-6606	guanosine nucleotides degradation II
AYJ52_RS17775	PWY-6607	guanosine nucleotides degradation I
AYJ52_RS17775	PWY-6608	guanosine nucleotides degradation III
AYJ52_RS17775	PWY-6999	theophylline degradation
AYJ52_RS17780	PWY-5663	tetrahydrobiopterin biosynthesis I
AYJ52_RS17780	PWY-5664	tetrahydrobiopterin biosynthesis II
AYJ52_RS17780	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AYJ52_RS17780	PWY-6703	preQ<sub>0</sub> biosynthesis
AYJ52_RS17780	PWY-6983	tetrahydrobiopterin biosynthesis III
AYJ52_RS17780	PWY-7442	drosopterin and aurodrosopterin biosynthesis
AYJ52_RS17805	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
AYJ52_RS17805	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
AYJ52_RS17815	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AYJ52_RS17815	PWY-5901	2,3-dihydroxybenzoate biosynthesis
AYJ52_RS17815	PWY-6406	salicylate biosynthesis I
AYJ52_RS17820	PWY-6012	acyl carrier protein metabolism I
AYJ52_RS17820	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
AYJ52_RS17840	PWY-6173	histamine biosynthesis
AYJ52_RS17845	PWY-5901	2,3-dihydroxybenzoate biosynthesis
AYJ52_RS17960	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
AYJ52_RS17965	PWY-1361	benzoyl-CoA degradation I (aerobic)
AYJ52_RS17965	PWY-2361	3-oxoadipate degradation
AYJ52_RS17965	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
AYJ52_RS18155	PWY-5386	methylglyoxal degradation I
AYJ52_RS18180	PWY-5381	pyridine nucleotide cycling (plants)
AYJ52_RS18180	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AYJ52_RS18180	PWY-6596	adenosine nucleotides degradation I
AYJ52_RS18180	PWY-6606	guanosine nucleotides degradation II
AYJ52_RS18180	PWY-6607	guanosine nucleotides degradation I
AYJ52_RS18180	PWY-6608	guanosine nucleotides degradation III
AYJ52_RS18180	PWY-7185	UTP and CTP dephosphorylation I
AYJ52_RS18195	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AYJ52_RS18195	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AYJ52_RS18220	PWY-6123	inosine-5'-phosphate biosynthesis I
AYJ52_RS18220	PWY-6124	inosine-5'-phosphate biosynthesis II
AYJ52_RS18220	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AYJ52_RS18220	PWY-7234	inosine-5'-phosphate biosynthesis III
AYJ52_RS18295	PWY-6409	pyoverdine I biosynthesis
AYJ52_RS18295	PWY-6562	norspermidine biosynthesis
AYJ52_RS18295	PWY-761	rhizobactin 1021 biosynthesis
AYJ52_RS18340	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AYJ52_RS18345	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AYJ52_RS18345	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AYJ52_RS18345	PWY-6897	thiamin salvage II
AYJ52_RS18345	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
AYJ52_RS18345	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
AYJ52_RS18345	PWY-7356	thiamin salvage IV (yeast)
AYJ52_RS18345	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AYJ52_RS18405	PWY-5913	TCA cycle VI (obligate autotrophs)
AYJ52_RS18405	PWY-6549	L-glutamine biosynthesis III
AYJ52_RS18405	PWY-6728	methylaspartate cycle
AYJ52_RS18405	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AYJ52_RS18405	PWY-7124	ethylene biosynthesis V (engineered)
AYJ52_RS18405	PWY-7254	TCA cycle VII (acetate-producers)
AYJ52_RS18405	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AYJ52_RS18415	PWY-5913	TCA cycle VI (obligate autotrophs)
AYJ52_RS18415	PWY-6549	L-glutamine biosynthesis III
AYJ52_RS18415	PWY-6728	methylaspartate cycle
AYJ52_RS18415	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AYJ52_RS18415	PWY-7124	ethylene biosynthesis V (engineered)
AYJ52_RS18415	PWY-7254	TCA cycle VII (acetate-producers)
AYJ52_RS18415	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AYJ52_RS18470	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
AYJ52_RS18485	PWY-723	alkylnitronates degradation
AYJ52_RS18505	PWY-3341	L-proline biosynthesis III
AYJ52_RS18505	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AYJ52_RS18525	PWY-1042	glycolysis IV (plant cytosol)
AYJ52_RS18525	PWY-5484	glycolysis II (from fructose 6-phosphate)
AYJ52_RS18525	PWY-6901	superpathway of glucose and xylose degradation
AYJ52_RS18525	PWY-7003	glycerol degradation to butanol
AYJ52_RS18645	PWY-5316	nicotine biosynthesis
AYJ52_RS18645	PWY-7342	superpathway of nicotine biosynthesis
AYJ52_RS18655	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AYJ52_RS18655	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AYJ52_RS18655	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AYJ52_RS18655	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
AYJ52_RS18655	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AYJ52_RS18655	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AYJ52_RS18665	PWY-6543	4-aminobenzoate biosynthesis
AYJ52_RS18710	PWY-6703	preQ<sub>0</sub> biosynthesis
AYJ52_RS18715	PWY-6703	preQ<sub>0</sub> biosynthesis
AYJ52_RS18725	PWY-6482	diphthamide biosynthesis (archaea)
AYJ52_RS18725	PWY-7546	diphthamide biosynthesis (eukaryotes)
AYJ52_RS18775	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AYJ52_RS18775	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AYJ52_RS18775	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AYJ52_RS19525	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AYJ52_RS19525	PWY-5686	UMP biosynthesis
AYJ52_RS19525	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AYJ52_RS19535	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AYJ52_RS19535	PWY-5686	UMP biosynthesis
AYJ52_RS19535	PWY-7400	L-arginine biosynthesis IV (archaebacteria)