locus-tag class description BDGL_000003 PF09318 Glycosyl transferase 1 domain A BDGL_000003 PF00534 Glycosyl transferases group 1 BDGL_000004 PF00132 Bacterial transferase hexapeptide (six repeats) BDGL_000011 PF00268 Ribonucleotide reductase, small chain BDGL_000013 PF03477 ATP cone domain BDGL_000013 PF02867 Ribonucleotide reductase, barrel domain BDGL_000013 PF00317 Ribonucleotide reductase, all-alpha domain BDGL_000014 PF00486 Transcriptional regulatory protein, C terminal BDGL_000014 PF00072 Response regulator receiver domain BDGL_000015 PF00512 His Kinase A (phospho-acceptor) domain BDGL_000015 PF00672 HAMP domain BDGL_000015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BDGL_000017 PF00990 Diguanylate cyclase, GGDEF domain BDGL_000018 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 BDGL_000019 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BDGL_000020 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BDGL_000020 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BDGL_000022 PF10531 SLBB domain BDGL_000022 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BDGL_000022 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BDGL_000023 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BDGL_000023 PF00384 Molybdopterin oxidoreductase BDGL_000023 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BDGL_000024 PF00146 NADH dehydrogenase BDGL_000025 PF12838 4Fe-4S dicluster domain BDGL_000026 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 BDGL_000027 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BDGL_000028 PF00361 Proton-conducting membrane transporter BDGL_000028 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BDGL_000029 PF00361 Proton-conducting membrane transporter BDGL_000030 PF00361 Proton-conducting membrane transporter BDGL_000032 PF00313 'Cold-shock' DNA-binding domain BDGL_000033 PF03466 LysR substrate binding domain BDGL_000033 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_000034 PF00970 Oxidoreductase FAD-binding domain BDGL_000034 PF00175 Oxidoreductase NAD-binding domain BDGL_000037 PF05552 Conserved TM helix BDGL_000040 PF00291 Pyridoxal-phosphate dependent enzyme BDGL_000041 PF13533 Biotin-lipoyl like BDGL_000047 PF09334 tRNA synthetases class I (M) BDGL_000047 PF01588 Putative tRNA binding domain BDGL_000049 PF10609 NUBPL iron-transfer P-loop NTPase BDGL_000051 PF01048 Phosphorylase superfamily BDGL_000054 PF00692 dUTPase BDGL_000060 PF01207 Dihydrouridine synthase (Dus) BDGL_000063 PF02881 SRP54-type protein, helical bundle domain BDGL_000063 PF02978 Signal peptide binding domain BDGL_000063 PF00448 SRP54-type protein, GTPase domain BDGL_000064 PF03309 Type III pantothenate kinase BDGL_000066 PF01925 Sulfite exporter TauE/SafE BDGL_000068 PF06470 SMC proteins Flexible Hinge Domain BDGL_000068 PF02463 RecF/RecN/SMC N terminal domain BDGL_000070 PF12826 Helix-hairpin-helix motif BDGL_000070 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BDGL_000070 PF00533 BRCA1 C Terminus (BRCT) domain BDGL_000070 PF03120 NAD-dependent DNA ligase OB-fold domain BDGL_000070 PF01653 NAD-dependent DNA ligase adenylation domain BDGL_000071 PF00210 Ferritin-like domain BDGL_000072 PF07690 Major Facilitator Superfamily BDGL_000073 PF00982 Glycosyltransferase family 20 BDGL_000074 PF02358 Trehalose-phosphatase BDGL_000075 PF12697 Alpha/beta hydrolase family BDGL_000075 PF08241 Methyltransferase domain BDGL_000076 PF04055 Radical SAM superfamily BDGL_000076 PF06968 Biotin and Thiamin Synthesis associated domain BDGL_000076 PF00202 Aminotransferase class-III BDGL_000077 PF00155 Aminotransferase class I and II BDGL_000080 PF01479 S4 domain BDGL_000080 PF00849 RNA pseudouridylate synthase BDGL_000081 PF04079 Segregation and condensation complex subunit ScpB BDGL_000082 PF02616 Segregation and condensation protein ScpA BDGL_000083 PF01300 Telomere recombination BDGL_000084 PF04315 Elongation factor P hydroxylase BDGL_000085 PF02620 Large ribosomal RNA subunit accumulation protein YceD BDGL_000086 PF01783 Ribosomal L32p protein family BDGL_000087 PF00698 Acyl transferase domain BDGL_000089 PF00550 Phosphopantetheine attachment site BDGL_000090 PF01476 LysM domain BDGL_000090 PF04972 BON domain BDGL_000091 PF02581 Thiamine monophosphate synthase BDGL_000091 PF03070 TENA/THI-4/PQQC family BDGL_000091 PF08543 Phosphomethylpyrimidine kinase BDGL_000093 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BDGL_000097 PF02261 Aspartate decarboxylase BDGL_000098 PF01195 Peptidyl-tRNA hydrolase BDGL_000099 PF01386 Ribosomal L25p family BDGL_000100 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BDGL_000100 PF14572 Phosphoribosyl synthetase-associated domain BDGL_000101 PF08544 GHMP kinases C terminal BDGL_000101 PF00288 GHMP kinases N terminal domain BDGL_000102 PF03550 Outer membrane lipoprotein LolB BDGL_000104 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BDGL_000104 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BDGL_000104 PF01488 Shikimate / quinate 5-dehydrogenase BDGL_000105 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BDGL_000105 PF01488 Shikimate / quinate 5-dehydrogenase BDGL_000105 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BDGL_000106 PF01807 CHC2 zinc finger BDGL_000106 PF08275 DNA primase catalytic core, N-terminal domain BDGL_000106 PF08278 DNA primase DnaG DnaB-binding BDGL_000106 PF10410 DnaB-helicase binding domain of primase BDGL_000107 PF13525 Outer membrane lipoprotein BDGL_000108 PF01479 S4 domain BDGL_000108 PF00849 RNA pseudouridylate synthase BDGL_000109 PF02578 Multi-copper polyphenol oxidoreductase laccase BDGL_000110 PF03358 NADPH-dependent FMN reductase BDGL_000111 PF01668 SmpB protein BDGL_000112 PF01467 Cytidylyltransferase-like BDGL_000113 PF12838 4Fe-4S dicluster domain BDGL_000115 PF03466 LysR substrate binding domain BDGL_000115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_000116 PF00180 Isocitrate/isopropylmalate dehydrogenase BDGL_000117 PF02028 BCCT, betaine/carnitine/choline family transporter BDGL_000118 PF07859 alpha/beta hydrolase fold BDGL_000119 PF00848 Ring hydroxylating alpha subunit (catalytic domain) BDGL_000119 PF00355 Rieske [2Fe-2S] domain BDGL_000120 PF00171 Aldehyde dehydrogenase family BDGL_000121 PF00970 Oxidoreductase FAD-binding domain BDGL_000121 PF00111 2Fe-2S iron-sulfur cluster binding domain BDGL_000121 PF00175 Oxidoreductase NAD-binding domain BDGL_000124 PF02540 NAD synthase BDGL_000124 PF00795 Carbon-nitrogen hydrolase BDGL_000126 PF03653 Uncharacterised protein family (UPF0093) BDGL_000127 PF02801 Beta-ketoacyl synthase, C-terminal domain BDGL_000127 PF00109 Beta-ketoacyl synthase, N-terminal domain BDGL_000129 PF00164 Ribosomal protein S12/S23 BDGL_000130 PF00177 Ribosomal protein S7p/S5e BDGL_000131 PF03764 Elongation factor G, domain IV BDGL_000131 PF00679 Elongation factor G C-terminus BDGL_000131 PF00009 Elongation factor Tu GTP binding domain BDGL_000131 PF14492 Elongation Factor G, domain II BDGL_000131 PF03144 Elongation factor Tu domain 2 BDGL_000132 PF03143 Elongation factor Tu C-terminal domain BDGL_000132 PF00009 Elongation factor Tu GTP binding domain BDGL_000132 PF03144 Elongation factor Tu domain 2 BDGL_000135 PF00583 Acetyltransferase (GNAT) family BDGL_000136 PF04376 Arginine-tRNA-protein transferase, N terminus BDGL_000136 PF04377 Arginine-tRNA-protein transferase, C terminus BDGL_000137 PF03588 Leucyl/phenylalanyl-tRNA protein transferase BDGL_000138 PF07992 Pyridine nucleotide-disulphide oxidoreductase BDGL_000139 PF09397 Ftsk gamma domain BDGL_000139 PF13491 4TM region of DNA translocase FtsK/SpoIIIE BDGL_000139 PF01580 FtsK/SpoIIIE family BDGL_000139 PF17854 FtsK alpha domain BDGL_000140 PF01810 LysE type translocator BDGL_000143 PF03776 Septum formation topological specificity factor MinE BDGL_000144 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BDGL_000145 PF03775 Septum formation inhibitor MinC, C-terminal domain BDGL_000147 PF01553 Acyltransferase BDGL_000148 PF00691 OmpA family BDGL_000148 PF13488 Glycine zipper BDGL_000149 PF13361 UvrD-like helicase C-terminal domain BDGL_000149 PF00580 UvrD/REP helicase N-terminal domain BDGL_000150 PF00692 dUTPase BDGL_000151 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BDGL_000151 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BDGL_000151 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BDGL_000151 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BDGL_000152 PF00696 Amino acid kinase family BDGL_000154 PF13230 Glutamine amidotransferases class-II BDGL_000155 PF01814 Hemerythrin HHE cation binding domain BDGL_000157 PF03658 RnfH family Ubiquitin BDGL_000158 PF04355 SmpA / OmlA family BDGL_000159 PF01475 Ferric uptake regulator family BDGL_000160 PF00437 Type II/IV secretion system protein BDGL_000161 PF00437 Type II/IV secretion system protein BDGL_000162 PF01168 Alanine racemase, N-terminal domain BDGL_000164 PF12320 Type 5 capsule protein repressor C-terminal domain BDGL_000164 PF00149 Calcineurin-like phosphoesterase BDGL_000169 PF01370 NAD dependent epimerase/dehydratase family BDGL_000169 PF08338 Domain of unknown function (DUF1731) BDGL_000170 PF01266 FAD dependent oxidoreductase BDGL_000171 PF00490 Delta-aminolevulinic acid dehydratase BDGL_000172 PF03061 Thioesterase superfamily BDGL_000173 PF13533 Biotin-lipoyl like BDGL_000174 PF07690 Major Facilitator Superfamily BDGL_000176 PF02384 N-6 DNA Methylase BDGL_000176 PF12161 HsdM N-terminal domain BDGL_000180 PF18766 SWI2/SNF2 ATPase BDGL_000180 PF12008 Type I restriction and modification enzyme - subunit R C terminal BDGL_000180 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) BDGL_000186 PF00083 Sugar (and other) transporter BDGL_000187 PF00701 Dihydrodipicolinate synthetase family BDGL_000189 PF08281 Sigma-70, region 4 BDGL_000189 PF04542 Sigma-70 region 2 BDGL_000191 PF00593 TonB dependent receptor BDGL_000191 PF07715 TonB-dependent Receptor Plug Domain BDGL_000193 PF04575 Protein of unknown function (DUF560) BDGL_000195 PF01126 Heme oxygenase BDGL_000200 PF13520 Amino acid permease BDGL_000201 PF02574 Homocysteine S-methyltransferase BDGL_000203 PF06039 Malate:quinone oxidoreductase (Mqo) BDGL_000204 PF00732 GMC oxidoreductase BDGL_000204 PF05199 GMC oxidoreductase BDGL_000205 PF00171 Aldehyde dehydrogenase family BDGL_000206 PF13977 BetI-type transcriptional repressor, C-terminal BDGL_000206 PF00440 Bacterial regulatory proteins, tetR family BDGL_000207 PF02028 BCCT, betaine/carnitine/choline family transporter BDGL_000208 PF02028 BCCT, betaine/carnitine/choline family transporter BDGL_000210 PF03061 Thioesterase superfamily BDGL_000212 PF07683 Cobalamin synthesis protein cobW C-terminal domain BDGL_000212 PF02492 CobW/HypB/UreG, nucleotide-binding domain BDGL_000213 PF00375 Sodium:dicarboxylate symporter family BDGL_000214 PF07152 YaeQ protein BDGL_000215 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BDGL_000216 PF14883 Hypothetical glycosyl hydrolase family 13 BDGL_000216 PF01522 Polysaccharide deacetylase BDGL_000217 PF00535 Glycosyl transferase family 2 BDGL_000219 PF00378 Enoyl-CoA hydratase/isomerase BDGL_000222 PF09339 IclR helix-turn-helix domain BDGL_000222 PF01614 Bacterial transcriptional regulator BDGL_000223 PF00355 Rieske [2Fe-2S] domain BDGL_000225 PF00355 Rieske [2Fe-2S] domain BDGL_000227 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BDGL_000228 PF14759 Reductase C-terminal BDGL_000228 PF07992 Pyridine nucleotide-disulphide oxidoreductase BDGL_000229 PF07690 Major Facilitator Superfamily BDGL_000231 PF12697 Alpha/beta hydrolase family BDGL_000233 PF03447 Homoserine dehydrogenase, NAD binding domain BDGL_000233 PF01958 Domain of unknown function DUF108 BDGL_000234 PF00171 Aldehyde dehydrogenase family BDGL_000235 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BDGL_000235 PF00205 Thiamine pyrophosphate enzyme, central domain BDGL_000235 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BDGL_000238 PF07690 Major Facilitator Superfamily BDGL_000239 PF01327 Polypeptide deformylase BDGL_000240 PF04960 Glutaminase BDGL_000241 PF12833 Helix-turn-helix domain BDGL_000241 PF02311 AraC-like ligand binding domain BDGL_000242 PF07690 Major Facilitator Superfamily BDGL_000243 PF01263 Aldose 1-epimerase BDGL_000245 PF03466 LysR substrate binding domain BDGL_000245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_000247 PF07690 Major Facilitator Superfamily BDGL_000248 PF00456 Transketolase, thiamine diphosphate binding domain BDGL_000249 PF02780 Transketolase, C-terminal domain BDGL_000249 PF02779 Transketolase, pyrimidine binding domain BDGL_000250 PF02310 B12 binding domain BDGL_000250 PF00809 Pterin binding enzyme BDGL_000250 PF02574 Homocysteine S-methyltransferase BDGL_000250 PF02607 B12 binding domain BDGL_000250 PF02965 Vitamin B12 dependent methionine synthase, activation domain BDGL_000251 PF02607 B12 binding domain BDGL_000251 PF02310 B12 binding domain BDGL_000251 PF00809 Pterin binding enzyme BDGL_000251 PF02965 Vitamin B12 dependent methionine synthase, activation domain BDGL_000251 PF02574 Homocysteine S-methyltransferase BDGL_000252 PF01384 Phosphate transporter family BDGL_000253 PF00291 Pyridoxal-phosphate dependent enzyme BDGL_000256 PF03781 Sulfatase-modifying factor enzyme 1 BDGL_000257 PF00884 Sulfatase BDGL_000259 PF01106 NifU-like domain BDGL_000259 PF01521 Iron-sulphur cluster biosynthesis BDGL_000261 PF07715 TonB-dependent Receptor Plug Domain BDGL_000261 PF00593 TonB dependent receptor BDGL_000263 PF12697 Alpha/beta hydrolase family BDGL_000264 PF00484 Carbonic anhydrase BDGL_000265 PF13472 GDSL-like Lipase/Acylhydrolase family BDGL_000266 PF00005 ABC transporter BDGL_000268 PF01694 Rhomboid family BDGL_000269 PF00912 Transglycosylase BDGL_000270 PF13089 Polyphosphate kinase N-terminal domain BDGL_000270 PF17941 Polyphosphate kinase C-terminal domain 1 BDGL_000270 PF13090 Polyphosphate kinase C-terminal domain 2 BDGL_000270 PF02503 Polyphosphate kinase middle domain BDGL_000273 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_000273 PF03466 LysR substrate binding domain BDGL_000274 PF00561 alpha/beta hydrolase fold BDGL_000275 PF07992 Pyridine nucleotide-disulphide oxidoreductase BDGL_000275 PF18113 Rubredoxin binding C-terminal domain BDGL_000276 PF00301 Rubredoxin BDGL_000279 PF01336 OB-fold nucleic acid binding domain BDGL_000279 PF00152 tRNA synthetases class II (D, K and N) BDGL_000280 PF14052 Capsule assembly protein Wzi BDGL_000282 PF01507 Phosphoadenosine phosphosulfate reductase family BDGL_000283 PF00009 Elongation factor Tu GTP binding domain BDGL_000286 PF03600 Citrate transporter BDGL_000287 PF01595 Cyclin M transmembrane N-terminal domain BDGL_000287 PF03471 Transporter associated domain BDGL_000287 PF00571 CBS domain BDGL_000288 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_000288 PF03466 LysR substrate binding domain BDGL_000289 PF00463 Isocitrate lyase family BDGL_000290 PF04170 NlpE N-terminal domain BDGL_000290 PF17185 NlpE C-terminal OB domain BDGL_000292 PF01774 UreD urease accessory protein BDGL_000293 PF00547 Urease, gamma subunit BDGL_000294 PF00699 Urease beta subunit BDGL_000296 PF00449 Urease alpha-subunit, N-terminal domain BDGL_000296 PF01979 Amidohydrolase family BDGL_000297 PF02814 UreE urease accessory protein, N-terminal domain BDGL_000297 PF05194 UreE urease accessory protein, C-terminal domain BDGL_000298 PF01730 UreF BDGL_000299 PF02492 CobW/HypB/UreG, nucleotide-binding domain BDGL_000302 PF03717 Penicillin-binding Protein dimerisation domain BDGL_000302 PF00905 Penicillin binding protein transpeptidase domain BDGL_000305 PF05191 Adenylate kinase, active site lid BDGL_000307 PF00730 HhH-GPD superfamily base excision DNA repair protein BDGL_000307 PF10576 Iron-sulfur binding domain of endonuclease III BDGL_000307 PF00633 Helix-hairpin-helix motif BDGL_000308 PF04060 Putative Fe-S cluster BDGL_000309 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BDGL_000309 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BDGL_000311 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BDGL_000312 PF02590 Predicted SPOUT methyltransferase BDGL_000313 PF02190 ATP-dependent protease La (LON) substrate-binding domain BDGL_000313 PF00004 ATPase family associated with various cellular activities (AAA) BDGL_000313 PF05362 Lon protease (S16) C-terminal proteolytic domain BDGL_000314 PF01812 5-formyltetrahydrofolate cyclo-ligase family BDGL_000321 PF00557 Metallopeptidase family M24 BDGL_000321 PF05195 Aminopeptidase P, N-terminal domain BDGL_000322 PF01494 FAD binding domain BDGL_000323 PF01494 FAD binding domain BDGL_000325 PF13411 MerR HTH family regulatory protein BDGL_000327 PF01810 LysE type translocator BDGL_000328 PF03466 LysR substrate binding domain BDGL_000328 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_000330 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BDGL_000331 PF02021 Uncharacterised protein family UPF0102 BDGL_000332 PF04972 BON domain BDGL_000334 PF09297 NADH pyrophosphatase zinc ribbon domain BDGL_000334 PF00293 NUDIX domain BDGL_000336 PF00929 Exonuclease BDGL_000337 PF01476 LysM domain BDGL_000337 PF01464 Transglycosylase SLT domain BDGL_000338 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BDGL_000339 PF00528 Binding-protein-dependent transport system inner membrane component BDGL_000340 PF00528 Binding-protein-dependent transport system inner membrane component BDGL_000340 PF12911 N-terminal TM domain of oligopeptide transport permease C BDGL_000341 PF00005 ABC transporter BDGL_000341 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BDGL_000342 PF07992 Pyridine nucleotide-disulphide oxidoreductase BDGL_000342 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BDGL_000343 PF00593 TonB dependent receptor BDGL_000343 PF07715 TonB-dependent Receptor Plug Domain BDGL_000344 PF00929 Exonuclease BDGL_000345 PF01979 Amidohydrolase family BDGL_000346 PF00563 EAL domain BDGL_000346 PF01590 GAF domain BDGL_000346 PF00990 Diguanylate cyclase, GGDEF domain BDGL_000346 PF00360 Phytochrome region BDGL_000347 PF00764 Arginosuccinate synthase BDGL_000348 PF07992 Pyridine nucleotide-disulphide oxidoreductase BDGL_000348 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BDGL_000351 PF05987 Bacterial protein of unknown function (DUF898) BDGL_000355 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) BDGL_000355 PF04717 Type VI secretion system, phage-baseplate injector BDGL_000355 PF13296 Putative type VI secretion system Rhs element Vgr BDGL_000360 PF00324 Amino acid permease BDGL_000361 PF01266 FAD dependent oxidoreductase BDGL_000362 PF00324 Amino acid permease BDGL_000364 PF00392 Bacterial regulatory proteins, gntR family BDGL_000364 PF07729 FCD domain BDGL_000366 PF00171 Aldehyde dehydrogenase family BDGL_000368 PF00202 Aminotransferase class-III BDGL_000369 PF04958 Arginine N-succinyltransferase beta subunit BDGL_000370 PF00324 Amino acid permease BDGL_000375 PF00171 Aldehyde dehydrogenase family BDGL_000376 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term BDGL_000376 PF12833 Helix-turn-helix domain BDGL_000377 PF00892 EamA-like transporter family BDGL_000378 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus BDGL_000378 PF08666 SAF domain BDGL_000379 PF07690 Major Facilitator Superfamily BDGL_000380 PF13378 Enolase C-terminal domain-like BDGL_000381 PF00701 Dihydrodipicolinate synthetase family BDGL_000382 PF00171 Aldehyde dehydrogenase family BDGL_000383 PF07729 FCD domain BDGL_000383 PF00392 Bacterial regulatory proteins, gntR family BDGL_000384 PF07519 Tannase and feruloyl esterase BDGL_000387 PF03573 outer membrane porin, OprD family BDGL_000388 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BDGL_000388 PF02770 Acyl-CoA dehydrogenase, middle domain BDGL_000388 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BDGL_000390 PF00171 Aldehyde dehydrogenase family BDGL_000391 PF00378 Enoyl-CoA hydratase/isomerase BDGL_000392 PF07690 Major Facilitator Superfamily BDGL_000395 PF00175 Oxidoreductase NAD-binding domain BDGL_000395 PF00111 2Fe-2S iron-sulfur cluster binding domain BDGL_000396 PF00355 Rieske [2Fe-2S] domain BDGL_000398 PF03781 Sulfatase-modifying factor enzyme 1 BDGL_000399 PF00884 Sulfatase BDGL_000400 PF07690 Major Facilitator Superfamily BDGL_000401 PF03573 outer membrane porin, OprD family BDGL_000402 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding BDGL_000402 PF18381 YcaO cyclodehydratase C-terminal domain BDGL_000403 PF05199 GMC oxidoreductase BDGL_000404 PF07859 alpha/beta hydrolase fold BDGL_000405 PF00106 short chain dehydrogenase BDGL_000406 PF00743 Flavin-binding monooxygenase-like BDGL_000408 PF05683 Fumarase C-terminus BDGL_000409 PF05681 Fumarate hydratase (Fumerase) BDGL_000410 PF07690 Major Facilitator Superfamily BDGL_000411 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_000411 PF03466 LysR substrate binding domain BDGL_000412 PF04072 Leucine carboxyl methyltransferase BDGL_000413 PF00743 Flavin-binding monooxygenase-like BDGL_000414 PF00106 short chain dehydrogenase BDGL_000416 PF17932 Tetracyclin repressor-like, C-terminal domain BDGL_000416 PF00440 Bacterial regulatory proteins, tetR family BDGL_000417 PF02678 Pirin BDGL_000417 PF17954 Quercetinase C-terminal cupin domain BDGL_000419 PF00860 Permease family BDGL_000420 PF00962 Adenosine/AMP deaminase BDGL_000421 PF01292 Prokaryotic cytochrome b561 BDGL_000423 PF01351 Ribonuclease HII BDGL_000424 PF02599 Global regulator protein family BDGL_000425 PF00696 Amino acid kinase family BDGL_000425 PF01842 ACT domain BDGL_000425 PF13840 ACT domain BDGL_000426 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BDGL_000426 PF02272 DHHA1 domain BDGL_000426 PF01411 tRNA synthetases class II (A) BDGL_000427 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BDGL_000427 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BDGL_000428 PF13393 Histidyl-tRNA synthetase BDGL_000429 PF00709 Adenylosuccinate synthetase BDGL_000432 PF00248 Aldo/keto reductase family BDGL_000433 PF13545 Crp-like helix-turn-helix domain BDGL_000433 PF00027 Cyclic nucleotide-binding domain BDGL_000435 PF02566 OsmC-like protein BDGL_000438 PF07724 AAA domain (Cdc48 subfamily) BDGL_000438 PF17871 AAA lid domain BDGL_000438 PF02861 Clp amino terminal domain, pathogenicity island component BDGL_000438 PF00004 ATPase family associated with various cellular activities (AAA) BDGL_000438 PF10431 C-terminal, D2-small domain, of ClpB protein BDGL_000441 PF10672 S-adenosylmethionine-dependent methyltransferase BDGL_000441 PF02926 THUMP domain BDGL_000441 PF01170 Putative RNA methylase family UPF0020 BDGL_000443 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BDGL_000443 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BDGL_000444 PF01979 Amidohydrolase family BDGL_000445 PF00691 OmpA family BDGL_000445 PF13488 Glycine zipper BDGL_000447 PF00043 Glutathione S-transferase, C-terminal domain BDGL_000447 PF13417 Glutathione S-transferase, N-terminal domain BDGL_000449 PF02390 Putative methyltransferase BDGL_000451 PF00043 Glutathione S-transferase, C-terminal domain BDGL_000451 PF02798 Glutathione S-transferase, N-terminal domain BDGL_000453 PF07992 Pyridine nucleotide-disulphide oxidoreductase BDGL_000453 PF13192 Thioredoxin domain BDGL_000457 PF10417 C-terminal domain of 1-Cys peroxiredoxin BDGL_000457 PF00578 AhpC/TSA family BDGL_000458 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold BDGL_000458 PF00271 Helicase conserved C-terminal domain BDGL_000458 PF11898 Domain of unknown function (DUF3418) BDGL_000458 PF04408 Helicase associated domain (HA2) BDGL_000458 PF00270 DEAD/DEAH box helicase BDGL_000459 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BDGL_000459 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BDGL_000461 PF07690 Major Facilitator Superfamily BDGL_000462 PF03594 Benzoate membrane transport protein BDGL_000463 PF00106 short chain dehydrogenase BDGL_000464 PF00111 2Fe-2S iron-sulfur cluster binding domain BDGL_000464 PF00970 Oxidoreductase FAD-binding domain BDGL_000464 PF00175 Oxidoreductase NAD-binding domain BDGL_000465 PF00866 Ring hydroxylating beta subunit BDGL_000466 PF00848 Ring hydroxylating alpha subunit (catalytic domain) BDGL_000466 PF00355 Rieske [2Fe-2S] domain BDGL_000468 PF03466 LysR substrate binding domain BDGL_000468 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_000470 PF00175 Oxidoreductase NAD-binding domain BDGL_000470 PF00111 2Fe-2S iron-sulfur cluster binding domain BDGL_000470 PF00970 Oxidoreductase FAD-binding domain BDGL_000472 PF02332 Methane/Phenol/Toluene Hydroxylase BDGL_000472 PF04945 YHS domain BDGL_000473 PF02406 MmoB/DmpM family BDGL_000474 PF02332 Methane/Phenol/Toluene Hydroxylase BDGL_000476 PF06099 Phenol hydroxylase subunit BDGL_000477 PF02830 V4R domain BDGL_000477 PF02954 Bacterial regulatory protein, Fis family BDGL_000477 PF06505 Activator of aromatic catabolism BDGL_000477 PF00158 Sigma-54 interaction domain BDGL_000479 PF00403 Heavy-metal-associated domain BDGL_000480 PF09278 MerR, DNA binding BDGL_000480 PF00376 MerR family regulatory protein BDGL_000487 PF02601 Exonuclease VII, large subunit BDGL_000487 PF13742 OB-fold nucleic acid binding domain BDGL_000493 PF01810 LysE type translocator BDGL_000494 PF03279 Bacterial lipid A biosynthesis acyltransferase BDGL_000495 PF00313 'Cold-shock' DNA-binding domain BDGL_000497 PF03807 NADP oxidoreductase coenzyme F420-dependent BDGL_000497 PF14748 Pyrroline-5-carboxylate reductase dimerisation BDGL_000499 PF01037 Lrp/AsnC ligand binding domain BDGL_000500 PF08241 Methyltransferase domain BDGL_000502 PF00440 Bacterial regulatory proteins, tetR family BDGL_000512 PF00924 Mechanosensitive ion channel BDGL_000513 PF00924 Mechanosensitive ion channel BDGL_000515 PF07690 Major Facilitator Superfamily BDGL_000516 PF01638 HxlR-like helix-turn-helix BDGL_000520 PF01406 tRNA synthetases class I (C) catalytic domain BDGL_000520 PF09190 DALR domain BDGL_000521 PF00571 CBS domain BDGL_000521 PF01380 SIS domain BDGL_000524 PF03968 OstA-like protein BDGL_000525 PF00005 ABC transporter BDGL_000525 PF12399 Branched-chain amino acid ATP-binding cassette transporter BDGL_000527 PF02321 Outer membrane efflux protein BDGL_000528 PF00664 ABC transporter transmembrane region BDGL_000528 PF00005 ABC transporter BDGL_000531 PF01205 Uncharacterized protein family UPF0029 BDGL_000532 PF00132 Bacterial transferase hexapeptide (six repeats) BDGL_000534 PF01596 O-methyltransferase BDGL_000536 PF00037 4Fe-4S binding domain BDGL_000536 PF11953 Domain of unknown function (DUF3470) BDGL_000538 PF05188 MutS domain II BDGL_000538 PF00488 MutS domain V BDGL_000538 PF05190 MutS family domain IV BDGL_000538 PF05192 MutS domain III BDGL_000538 PF01624 MutS domain I BDGL_000539 PF00202 Aminotransferase class-III BDGL_000540 PF12833 Helix-turn-helix domain BDGL_000540 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term BDGL_000542 PF01636 Phosphotransferase enzyme family BDGL_000543 PF13520 Amino acid permease BDGL_000549 PF00313 'Cold-shock' DNA-binding domain BDGL_000554 PF00199 Catalase BDGL_000555 PF01292 Prokaryotic cytochrome b561 BDGL_000557 PF07690 Major Facilitator Superfamily BDGL_000561 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_000561 PF03466 LysR substrate binding domain BDGL_000562 PF01979 Amidohydrolase family BDGL_000565 PF00593 TonB dependent receptor BDGL_000565 PF07715 TonB-dependent Receptor Plug Domain BDGL_000565 PF07660 Secretin and TonB N terminus short domain BDGL_000566 PF00593 TonB dependent receptor BDGL_000566 PF07715 TonB-dependent Receptor Plug Domain BDGL_000567 PF16220 Domain of unknown function (DUF4880) BDGL_000567 PF04773 FecR protein BDGL_000568 PF08281 Sigma-70, region 4 BDGL_000568 PF04542 Sigma-70 region 2 BDGL_000569 PF00990 Diguanylate cyclase, GGDEF domain BDGL_000569 PF03707 Bacterial signalling protein N terminal repeat BDGL_000569 PF00563 EAL domain BDGL_000570 PF07859 alpha/beta hydrolase fold BDGL_000571 PF00561 alpha/beta hydrolase fold BDGL_000573 PF00440 Bacterial regulatory proteins, tetR family BDGL_000574 PF01810 LysE type translocator BDGL_000575 PF00440 Bacterial regulatory proteins, tetR family BDGL_000576 PF00561 alpha/beta hydrolase fold BDGL_000577 PF00293 NUDIX domain BDGL_000580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_000580 PF03466 LysR substrate binding domain BDGL_000583 PF01638 HxlR-like helix-turn-helix BDGL_000584 PF05368 NmrA-like family BDGL_000591 PF07681 DoxX BDGL_000593 PF05114 Protein of unknown function (DUF692) BDGL_000595 PF08281 Sigma-70, region 4 BDGL_000595 PF04542 Sigma-70 region 2 BDGL_000597 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_000597 PF03466 LysR substrate binding domain BDGL_000598 PF01566 Natural resistance-associated macrophage protein BDGL_000599 PF03746 LamB/YcsF family BDGL_000600 PF07286 Protein of unknown function (DUF1445) BDGL_000601 PF02682 Carboxyltransferase domain, subdomain C and D BDGL_000602 PF02785 Biotin carboxylase C-terminal domain BDGL_000602 PF00289 Biotin carboxylase, N-terminal domain BDGL_000602 PF00364 Biotin-requiring enzyme BDGL_000602 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BDGL_000604 PF00654 Voltage gated chloride channel BDGL_000608 PF00892 EamA-like transporter family BDGL_000609 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BDGL_000609 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BDGL_000610 PF00107 Zinc-binding dehydrogenase BDGL_000610 PF08240 Alcohol dehydrogenase GroES-like domain BDGL_000610 PF13823 Alcohol dehydrogenase GroES-associated BDGL_000613 PF02785 Biotin carboxylase C-terminal domain BDGL_000613 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BDGL_000613 PF00289 Biotin carboxylase, N-terminal domain BDGL_000614 PF02525 Flavodoxin-like fold BDGL_000615 PF01638 HxlR-like helix-turn-helix BDGL_000618 PF08753 NikR C terminal nickel binding domain BDGL_000618 PF01402 Ribbon-helix-helix protein, copG family BDGL_000619 PF01425 Amidase BDGL_000620 PF00497 Bacterial extracellular solute-binding proteins, family 3 BDGL_000621 PF00005 ABC transporter BDGL_000625 PF13296 Putative type VI secretion system Rhs element Vgr BDGL_000625 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) BDGL_000625 PF04717 Type VI secretion system, phage-baseplate injector BDGL_000628 PF03527 RHS protein BDGL_000628 PF05593 RHS Repeat BDGL_000632 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) BDGL_000632 PF13296 Putative type VI secretion system Rhs element Vgr BDGL_000632 PF04717 Type VI secretion system, phage-baseplate injector BDGL_000640 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath BDGL_000643 PF05947 Type VI secretion system, TssF BDGL_000647 PF06744 Type VI secretion protein IcmF C-terminal BDGL_000647 PF14331 ImcF-related N-terminal domain BDGL_000647 PF06761 Intracellular multiplication and human macrophage-killing BDGL_000650 PF00691 OmpA family BDGL_000650 PF18393 MotY N-terminal domain BDGL_000652 PF17871 AAA lid domain BDGL_000652 PF10431 C-terminal, D2-small domain, of ClpB protein BDGL_000652 PF07724 AAA domain (Cdc48 subfamily) BDGL_000652 PF00004 ATPase family associated with various cellular activities (AAA) BDGL_000653 PF06812 ImpA, N-terminal, type VI secretion system BDGL_000654 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE BDGL_000659 PF12796 Ankyrin repeats (3 copies) BDGL_000660 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BDGL_000661 PF07690 Major Facilitator Superfamily BDGL_000664 PF00392 Bacterial regulatory proteins, gntR family BDGL_000664 PF00155 Aminotransferase class I and II BDGL_000665 PF02677 Epoxyqueuosine reductase QueH BDGL_000666 PF09278 MerR, DNA binding BDGL_000666 PF00376 MerR family regulatory protein BDGL_000669 PF00701 Dihydrodipicolinate synthetase family BDGL_000671 PF00392 Bacterial regulatory proteins, gntR family BDGL_000672 PF05544 Proline racemase BDGL_000673 PF01266 FAD dependent oxidoreductase BDGL_000675 PF04324 BFD-like [2Fe-2S] binding domain BDGL_000675 PF07992 Pyridine nucleotide-disulphide oxidoreductase BDGL_000677 PF00083 Sugar (and other) transporter BDGL_000678 PF00171 Aldehyde dehydrogenase family BDGL_000679 PF13520 Amino acid permease BDGL_000680 PF03313 Serine dehydratase alpha chain BDGL_000680 PF03315 Serine dehydratase beta chain BDGL_000681 PF01575 MaoC like domain BDGL_000681 PF00171 Aldehyde dehydrogenase family BDGL_000682 PF05138 Phenylacetic acid catabolic protein BDGL_000683 PF06243 Phenylacetic acid degradation B BDGL_000684 PF05138 Phenylacetic acid catabolic protein BDGL_000685 PF01883 Iron-sulfur cluster assembly protein BDGL_000686 PF00970 Oxidoreductase FAD-binding domain BDGL_000686 PF00175 Oxidoreductase NAD-binding domain BDGL_000686 PF00111 2Fe-2S iron-sulfur cluster binding domain BDGL_000687 PF00970 Oxidoreductase FAD-binding domain BDGL_000687 PF00111 2Fe-2S iron-sulfur cluster binding domain BDGL_000687 PF00175 Oxidoreductase NAD-binding domain BDGL_000688 PF00378 Enoyl-CoA hydratase/isomerase BDGL_000689 PF00378 Enoyl-CoA hydratase/isomerase BDGL_000690 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BDGL_000690 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain BDGL_000690 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BDGL_000691 PF00108 Thiolase, N-terminal domain BDGL_000691 PF02803 Thiolase, C-terminal domain BDGL_000692 PF14535 AMP-binding enzyme C-terminal domain BDGL_000692 PF00501 AMP-binding enzyme BDGL_000693 PF07848 PaaX-like protein BDGL_000693 PF08223 PaaX-like protein C-terminal domain BDGL_000694 PF00132 Bacterial transferase hexapeptide (six repeats) BDGL_000695 PF03061 Thioesterase superfamily BDGL_000703 PF12697 Alpha/beta hydrolase family BDGL_000704 PF01613 Flavin reductase like domain BDGL_000705 PF00296 Luciferase-like monooxygenase BDGL_000706 PF00171 Aldehyde dehydrogenase family BDGL_000708 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin BDGL_000710 PF00171 Aldehyde dehydrogenase family BDGL_000711 PF02627 Carboxymuconolactone decarboxylase family BDGL_000712 PF03466 LysR substrate binding domain BDGL_000712 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_000713 PF02525 Flavodoxin-like fold BDGL_000714 PF01614 Bacterial transcriptional regulator BDGL_000714 PF09339 IclR helix-turn-helix domain BDGL_000715 PF01494 FAD binding domain BDGL_000716 PF01168 Alanine racemase, N-terminal domain BDGL_000716 PF00842 Alanine racemase, C-terminal domain BDGL_000717 PF00392 Bacterial regulatory proteins, gntR family BDGL_000717 PF07702 UTRA domain BDGL_000719 PF00005 ABC transporter BDGL_000719 PF08402 TOBE domain BDGL_000720 PF00528 Binding-protein-dependent transport system inner membrane component BDGL_000721 PF01266 FAD dependent oxidoreductase BDGL_000722 PF00266 Aminotransferase class-V BDGL_000723 PF13419 Haloacid dehalogenase-like hydrolase BDGL_000724 PF07690 Major Facilitator Superfamily BDGL_000725 PF02770 Acyl-CoA dehydrogenase, middle domain BDGL_000725 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BDGL_000725 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BDGL_000726 PF02515 CoA-transferase family III BDGL_000727 PF09339 IclR helix-turn-helix domain BDGL_000728 PF00378 Enoyl-CoA hydratase/isomerase BDGL_000729 PF03060 Nitronate monooxygenase BDGL_000730 PF07690 Major Facilitator Superfamily BDGL_000731 PF09339 IclR helix-turn-helix domain BDGL_000732 PF00108 Thiolase, N-terminal domain BDGL_000732 PF02803 Thiolase, C-terminal domain BDGL_000733 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain BDGL_000733 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BDGL_000733 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BDGL_000735 PF00378 Enoyl-CoA hydratase/isomerase BDGL_000736 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BDGL_000736 PF02770 Acyl-CoA dehydrogenase, middle domain BDGL_000736 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BDGL_000737 PF07690 Major Facilitator Superfamily BDGL_000738 PF01144 Coenzyme A transferase BDGL_000739 PF01144 Coenzyme A transferase BDGL_000741 PF07690 Major Facilitator Superfamily BDGL_000743 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BDGL_000743 PF12806 Acetyl-CoA dehydrogenase C-terminal like BDGL_000743 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BDGL_000743 PF02770 Acyl-CoA dehydrogenase, middle domain BDGL_000746 PF03466 LysR substrate binding domain BDGL_000746 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_000747 PF00682 HMGL-like BDGL_000748 PF00289 Biotin carboxylase, N-terminal domain BDGL_000748 PF18140 Propionyl-coenzyme A carboxylase BT domain BDGL_000748 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BDGL_000748 PF00364 Biotin-requiring enzyme BDGL_000748 PF02785 Biotin carboxylase C-terminal domain BDGL_000749 PF00378 Enoyl-CoA hydratase/isomerase BDGL_000750 PF01039 Carboxyl transferase domain BDGL_000751 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BDGL_000751 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BDGL_000751 PF02770 Acyl-CoA dehydrogenase, middle domain BDGL_000752 PF00440 Bacterial regulatory proteins, tetR family BDGL_000753 PF13193 AMP-binding enzyme C-terminal domain BDGL_000753 PF00501 AMP-binding enzyme BDGL_000756 PF07690 Major Facilitator Superfamily BDGL_000758 PF03466 LysR substrate binding domain BDGL_000758 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_000766 PF00199 Catalase BDGL_000766 PF18011 C-terminal domain found in long catalases BDGL_000766 PF06628 Catalase-related immune-responsive BDGL_000772 PF00717 Peptidase S24-like BDGL_000774 PF01037 Lrp/AsnC ligand binding domain BDGL_000774 PF13404 AsnC-type helix-turn-helix domain BDGL_000776 PF00512 His Kinase A (phospho-acceptor) domain BDGL_000776 PF09308 LuxQ, periplasmic BDGL_000776 PF00072 Response regulator receiver domain BDGL_000776 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BDGL_000777 PF00072 Response regulator receiver domain BDGL_000780 PF00528 Binding-protein-dependent transport system inner membrane component BDGL_000781 PF00528 Binding-protein-dependent transport system inner membrane component BDGL_000782 PF00005 ABC transporter BDGL_000783 PF00497 Bacterial extracellular solute-binding proteins, family 3 BDGL_000784 PF00497 Bacterial extracellular solute-binding proteins, family 3 BDGL_000786 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_000786 PF03466 LysR substrate binding domain BDGL_000787 PF01810 LysE type translocator BDGL_000788 PF00266 Aminotransferase class-V BDGL_000790 PF00132 Bacterial transferase hexapeptide (six repeats) BDGL_000791 PF00581 Rhodanese-like domain BDGL_000793 PF03466 LysR substrate binding domain BDGL_000793 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_000797 PF02798 Glutathione S-transferase, N-terminal domain BDGL_000798 PF14834 Glutathione S-transferase, C-terminal domain BDGL_000798 PF02798 Glutathione S-transferase, N-terminal domain BDGL_000799 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_000799 PF03466 LysR substrate binding domain BDGL_000800 PF03788 LrgA family BDGL_000801 PF04172 LrgB-like family BDGL_000802 PF00155 Aminotransferase class I and II BDGL_000802 PF00392 Bacterial regulatory proteins, gntR family BDGL_000805 PF07690 Major Facilitator Superfamily BDGL_000806 PF16957 Malonate decarboxylase, alpha subunit, transporter BDGL_000807 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase BDGL_000808 PF06857 Malonate decarboxylase delta subunit (MdcD) BDGL_000809 PF01039 Carboxyl transferase domain BDGL_000811 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG BDGL_000812 PF00698 Acyl transferase domain BDGL_000815 PF03466 LysR substrate binding domain BDGL_000815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_000816 PF00392 Bacterial regulatory proteins, gntR family BDGL_000816 PF00155 Aminotransferase class I and II BDGL_000818 PF02322 Cytochrome bd terminal oxidase subunit II BDGL_000819 PF01654 Cytochrome bd terminal oxidase subunit I BDGL_000821 PF02770 Acyl-CoA dehydrogenase, middle domain BDGL_000821 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BDGL_000821 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BDGL_000822 PF00296 Luciferase-like monooxygenase BDGL_000823 PF00083 Sugar (and other) transporter BDGL_000825 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BDGL_000826 PF00005 ABC transporter BDGL_000827 PF00528 Binding-protein-dependent transport system inner membrane component BDGL_000828 PF02668 Taurine catabolism dioxygenase TauD, TfdA family BDGL_000829 PF01177 Asp/Glu/Hydantoin racemase BDGL_000830 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin BDGL_000832 PF03466 LysR substrate binding domain BDGL_000832 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_000834 PF01979 Amidohydrolase family BDGL_000834 PF13382 Adenine deaminase C-terminal domain BDGL_000835 PF03960 ArsC family BDGL_000836 PF01022 Bacterial regulatory protein, arsR family BDGL_000837 PF01758 Sodium Bile acid symporter family BDGL_000838 PF03466 LysR substrate binding domain BDGL_000838 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_000841 PF07992 Pyridine nucleotide-disulphide oxidoreductase BDGL_000841 PF13192 Thioredoxin domain BDGL_000844 PF00132 Bacterial transferase hexapeptide (six repeats) BDGL_000845 PF00588 SpoU rRNA Methylase family BDGL_000846 PF07733 Bacterial DNA polymerase III alpha NTPase domain BDGL_000846 PF02811 PHP domain BDGL_000846 PF14579 Helix-hairpin-helix motif BDGL_000846 PF01336 OB-fold nucleic acid binding domain BDGL_000846 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BDGL_000847 PF00710 Asparaginase, N-terminal BDGL_000847 PF17763 Glutaminase/Asparaginase C-terminal domain BDGL_000848 PF00375 Sodium:dicarboxylate symporter family BDGL_000849 PF00155 Aminotransferase class I and II BDGL_000850 PF01641 SelR domain BDGL_000851 PF00255 Glutathione peroxidase BDGL_000852 PF12852 Cupin BDGL_000852 PF12833 Helix-turn-helix domain BDGL_000854 PF00155 Aminotransferase class I and II BDGL_000855 PF08335 GlnD PII-uridylyltransferase BDGL_000855 PF01966 HD domain BDGL_000855 PF01909 Nucleotidyltransferase domain BDGL_000856 PF02222 ATP-grasp domain BDGL_000858 PF05437 Branched-chain amino acid transport protein (AzlD) BDGL_000859 PF03591 AzlC protein BDGL_000864 PF06071 Protein of unknown function (DUF933) BDGL_000864 PF01926 50S ribosome-binding GTPase BDGL_000865 PF00528 Binding-protein-dependent transport system inner membrane component BDGL_000866 PF09383 NIL domain BDGL_000866 PF00005 ABC transporter BDGL_000867 PF03180 NLPA lipoprotein BDGL_000868 PF03180 NLPA lipoprotein BDGL_000869 PF00296 Luciferase-like monooxygenase BDGL_000871 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BDGL_000871 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BDGL_000874 PF00528 Binding-protein-dependent transport system inner membrane component BDGL_000875 PF00528 Binding-protein-dependent transport system inner membrane component BDGL_000876 PF00005 ABC transporter BDGL_000878 PF01037 Lrp/AsnC ligand binding domain BDGL_000879 PF01709 Transcriptional regulator BDGL_000882 PF00440 Bacterial regulatory proteins, tetR family BDGL_000884 PF03466 LysR substrate binding domain BDGL_000884 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_000886 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin BDGL_000888 PF00892 EamA-like transporter family BDGL_000889 PF03466 LysR substrate binding domain BDGL_000889 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_000890 PF00419 Fimbrial protein BDGL_000891 PF00577 Outer membrane usher protein BDGL_000891 PF13954 PapC N-terminal domain BDGL_000891 PF13953 PapC C-terminal domain BDGL_000892 PF02753 Pili assembly chaperone PapD, C-terminal domain BDGL_000892 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BDGL_000893 PF16970 Type-1 fimbrial protein, A BDGL_000896 PF04055 Radical SAM superfamily BDGL_000896 PF06968 Biotin and Thiamin Synthesis associated domain BDGL_000897 PF08331 Domain of unknown function (DUF1730) BDGL_000898 PF03853 YjeF-related protein N-terminus BDGL_000898 PF01256 Carbohydrate kinase BDGL_000900 PF02075 Crossover junction endodeoxyribonuclease RuvC BDGL_000903 PF00905 Penicillin binding protein transpeptidase domain BDGL_000907 PF00438 S-adenosylmethionine synthetase, N-terminal domain BDGL_000907 PF02773 S-adenosylmethionine synthetase, C-terminal domain BDGL_000907 PF02772 S-adenosylmethionine synthetase, central domain BDGL_000908 PF02773 S-adenosylmethionine synthetase, C-terminal domain BDGL_000908 PF02772 S-adenosylmethionine synthetase, central domain BDGL_000908 PF00438 S-adenosylmethionine synthetase, N-terminal domain BDGL_000909 PF02779 Transketolase, pyrimidine binding domain BDGL_000909 PF02780 Transketolase, C-terminal domain BDGL_000909 PF00456 Transketolase, thiamine diphosphate binding domain BDGL_000911 PF04264 YceI-like domain BDGL_000913 PF09992 Phosphodiester glycosidase BDGL_000915 PF05958 tRNA (Uracil-5-)-methyltransferase BDGL_000916 PF04229 GrpB protein BDGL_000917 PF18327 Proline utilization A proline dehydrogenase N-terminal domain BDGL_000917 PF00171 Aldehyde dehydrogenase family BDGL_000917 PF01619 Proline dehydrogenase BDGL_000917 PF14850 DNA-binding domain of Proline dehydrogenase BDGL_000918 PF01037 Lrp/AsnC ligand binding domain BDGL_000919 PF00474 Sodium:solute symporter family BDGL_000920 PF02146 Sir2 family BDGL_000921 PF01597 Glycine cleavage H-protein BDGL_000922 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term BDGL_000922 PF12833 Helix-turn-helix domain BDGL_000924 PF00005 ABC transporter BDGL_000924 PF00664 ABC transporter transmembrane region BDGL_000925 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) BDGL_000926 PF06912 Protein of unknown function (DUF1275) BDGL_000927 PF00375 Sodium:dicarboxylate symporter family BDGL_000930 PF08007 Cupin superfamily protein BDGL_000931 PF02545 Maf-like protein BDGL_000933 PF00162 Phosphoglycerate kinase BDGL_000935 PF01116 Fructose-bisphosphate aldolase class-II BDGL_000936 PF09312 SurA N-terminal domain BDGL_000936 PF00639 PPIC-type PPIASE domain BDGL_000937 PF03968 OstA-like protein BDGL_000937 PF04453 LPS transport system D BDGL_000938 PF01636 Phosphotransferase enzyme family BDGL_000939 PF00483 Nucleotidyl transferase BDGL_000940 PF02527 rRNA small subunit methyltransferase G BDGL_000941 PF13614 AAA domain BDGL_000942 PF02195 ParB-like nuclease domain BDGL_000942 PF17762 HTH domain found in ParB protein BDGL_000943 PF01618 MotA/TolQ/ExbB proton channel family BDGL_000945 PF00664 ABC transporter transmembrane region BDGL_000945 PF00005 ABC transporter BDGL_000946 PF02606 Tetraacyldisaccharide-1-P 4'-kinase BDGL_000947 PF02348 Cytidylyltransferase BDGL_000948 PF09115 DNA polymerase III, delta subunit, C terminal BDGL_000950 PF01026 TatD related DNase BDGL_000953 PF07963 Prokaryotic N-terminal methylation motif BDGL_000953 PF02501 Type II secretion system (T2SS), protein I BDGL_000954 PF11612 Type II secretion system (T2SS), protein J BDGL_000954 PF07963 Prokaryotic N-terminal methylation motif BDGL_000955 PF03934 Type II secretion system (T2SS), protein K BDGL_000957 PF03167 Uracil DNA glycosylase superfamily BDGL_000959 PF14437 MafB19-like deaminase BDGL_000961 PF02224 Cytidylate kinase BDGL_000962 PF00575 S1 RNA binding domain BDGL_000963 PF00216 Bacterial DNA-binding protein BDGL_000965 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BDGL_000966 PF03956 Lysine exporter LysO BDGL_000967 PF00743 Flavin-binding monooxygenase-like BDGL_000969 PF03969 AFG1-like ATPase BDGL_000970 PF01274 Malate synthase BDGL_000972 PF02472 Biopolymer transport protein ExbD/TolR BDGL_000973 PF02472 Biopolymer transport protein ExbD/TolR BDGL_000974 PF01618 MotA/TolQ/ExbB proton channel family BDGL_000976 PF00593 TonB dependent receptor BDGL_000976 PF07715 TonB-dependent Receptor Plug Domain BDGL_000979 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BDGL_000980 PF01432 Peptidase family M3 BDGL_000981 PF00528 Binding-protein-dependent transport system inner membrane component BDGL_000982 PF00528 Binding-protein-dependent transport system inner membrane component BDGL_000982 PF12911 N-terminal TM domain of oligopeptide transport permease C BDGL_000983 PF00005 ABC transporter BDGL_000983 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BDGL_000986 PF00459 Inositol monophosphatase family BDGL_000988 PF01649 Ribosomal protein S20 BDGL_000989 PF13460 NAD(P)H-binding BDGL_000990 PF03737 Aldolase/RraA BDGL_000994 PF02559 CarD-like/TRCF domain BDGL_000994 PF17757 UvrB interaction domain BDGL_000994 PF00270 DEAD/DEAH box helicase BDGL_000994 PF03461 TRCF domain BDGL_000994 PF00271 Helicase conserved C-terminal domain BDGL_000996 PF00211 Adenylate and Guanylate cyclase catalytic domain BDGL_000997 PF00111 2Fe-2S iron-sulfur cluster binding domain BDGL_000998 PF00012 Hsp70 protein BDGL_000999 PF00226 DnaJ domain BDGL_000999 PF07743 HSCB C-terminal oligomerisation domain BDGL_001000 PF01521 Iron-sulphur cluster biosynthesis BDGL_001001 PF01592 NifU-like N terminal domain BDGL_001002 PF00266 Aminotransferase class-V BDGL_001003 PF02082 Transcriptional regulator BDGL_001006 PF00216 Bacterial DNA-binding protein BDGL_001007 PF00639 PPIC-type PPIASE domain BDGL_001007 PF09312 SurA N-terminal domain BDGL_001008 PF12852 Cupin BDGL_001008 PF12833 Helix-turn-helix domain BDGL_001009 PF00487 Fatty acid desaturase BDGL_001010 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BDGL_001010 PF02770 Acyl-CoA dehydrogenase, middle domain BDGL_001010 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BDGL_001011 PF02770 Acyl-CoA dehydrogenase, middle domain BDGL_001011 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BDGL_001011 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BDGL_001012 PF03109 ABC1 family BDGL_001014 PF04073 Aminoacyl-tRNA editing domain BDGL_001015 PF07715 TonB-dependent Receptor Plug Domain BDGL_001015 PF00593 TonB dependent receptor BDGL_001018 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase BDGL_001019 PF02277 Phosphoribosyltransferase BDGL_001022 PF02654 Cobalamin-5-phosphate synthase BDGL_001023 PF00793 DAHP synthetase I family BDGL_001024 PF01925 Sulfite exporter TauE/SafE BDGL_001029 PF07715 TonB-dependent Receptor Plug Domain BDGL_001029 PF00593 TonB dependent receptor BDGL_001030 PF02684 Lipid-A-disaccharide synthetase BDGL_001035 PF01230 HIT domain BDGL_001038 PF00561 alpha/beta hydrolase fold BDGL_001039 PF01053 Cys/Met metabolism PLP-dependent enzyme BDGL_001041 PF02575 YbaB/EbfC DNA-binding family BDGL_001042 PF02132 RecR protein BDGL_001042 PF13662 Toprim domain BDGL_001043 PF01612 3'-5' exonuclease BDGL_001043 PF00570 HRDC domain BDGL_001044 PF02525 Flavodoxin-like fold BDGL_001045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_001045 PF03466 LysR substrate binding domain BDGL_001049 PF05166 YcgL domain BDGL_001051 PF01434 Peptidase family M41 BDGL_001051 PF00004 ATPase family associated with various cellular activities (AAA) BDGL_001051 PF17862 AAA+ lid domain BDGL_001053 PF00291 Pyridoxal-phosphate dependent enzyme BDGL_001054 PF05175 Methyltransferase small domain BDGL_001055 PF01264 Chorismate synthase BDGL_001057 PF00990 Diguanylate cyclase, GGDEF domain BDGL_001057 PF08448 PAS fold BDGL_001060 PF04055 Radical SAM superfamily BDGL_001061 PF00676 Dehydrogenase E1 component BDGL_001062 PF02779 Transketolase, pyrimidine binding domain BDGL_001062 PF02780 Transketolase, C-terminal domain BDGL_001063 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BDGL_001063 PF02817 e3 binding domain BDGL_001063 PF00364 Biotin-requiring enzyme BDGL_001064 PF07992 Pyridine nucleotide-disulphide oxidoreductase BDGL_001064 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BDGL_001065 PF00106 short chain dehydrogenase BDGL_001066 PF08240 Alcohol dehydrogenase GroES-like domain BDGL_001066 PF00107 Zinc-binding dehydrogenase BDGL_001067 PF01062 Bestrophin, RFP-TM, chloride channel BDGL_001068 PF00158 Sigma-54 interaction domain BDGL_001068 PF00072 Response regulator receiver domain BDGL_001068 PF02954 Bacterial regulatory protein, Fis family BDGL_001069 PF04273 Putative phosphatase (DUF442) BDGL_001069 PF00753 Metallo-beta-lactamase superfamily BDGL_001070 PF00753 Metallo-beta-lactamase superfamily BDGL_001070 PF04273 Putative phosphatase (DUF442) BDGL_001072 PF01925 Sulfite exporter TauE/SafE BDGL_001075 PF12833 Helix-turn-helix domain BDGL_001075 PF06445 GyrI-like small molecule binding domain BDGL_001077 PF02525 Flavodoxin-like fold BDGL_001079 PF00392 Bacterial regulatory proteins, gntR family BDGL_001079 PF07702 UTRA domain BDGL_001082 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BDGL_001083 PF00528 Binding-protein-dependent transport system inner membrane component BDGL_001084 PF00005 ABC transporter BDGL_001087 PF00083 Sugar (and other) transporter BDGL_001088 PF00593 TonB dependent receptor BDGL_001088 PF07715 TonB-dependent Receptor Plug Domain BDGL_001089 PF10415 Fumarase C C-terminus BDGL_001089 PF00206 Lyase BDGL_001092 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_001092 PF03466 LysR substrate binding domain BDGL_001093 PF03466 LysR substrate binding domain BDGL_001093 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_001094 PF02803 Thiolase, C-terminal domain BDGL_001094 PF00108 Thiolase, N-terminal domain BDGL_001095 PF02667 Short chain fatty acid transporter BDGL_001096 PF01144 Coenzyme A transferase BDGL_001097 PF01144 Coenzyme A transferase BDGL_001098 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_001098 PF03466 LysR substrate binding domain BDGL_001107 PF06719 AraC-type transcriptional regulator N-terminus BDGL_001107 PF12833 Helix-turn-helix domain BDGL_001108 PF07690 Major Facilitator Superfamily BDGL_001110 PF01738 Dienelactone hydrolase family BDGL_001113 PF01613 Flavin reductase like domain BDGL_001115 PF12833 Helix-turn-helix domain BDGL_001115 PF14525 AraC-binding-like domain BDGL_001116 PF00175 Oxidoreductase NAD-binding domain BDGL_001116 PF00970 Oxidoreductase FAD-binding domain BDGL_001116 PF00111 2Fe-2S iron-sulfur cluster binding domain BDGL_001117 PF00866 Ring hydroxylating beta subunit BDGL_001118 PF00848 Ring hydroxylating alpha subunit (catalytic domain) BDGL_001118 PF00355 Rieske [2Fe-2S] domain BDGL_001119 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_001119 PF03459 TOBE domain BDGL_001121 PF00528 Binding-protein-dependent transport system inner membrane component BDGL_001122 PF03459 TOBE domain BDGL_001122 PF00005 ABC transporter BDGL_001123 PF00106 short chain dehydrogenase BDGL_001124 PF00550 Phosphopantetheine attachment site BDGL_001124 PF00857 Isochorismatase family BDGL_001126 PF00149 Calcineurin-like phosphoesterase BDGL_001127 PF12706 Beta-lactamase superfamily domain BDGL_001128 PF03070 TENA/THI-4/PQQC family BDGL_001129 PF05402 Coenzyme PQQ synthesis protein D (PqqD) BDGL_001130 PF13186 Iron-sulfur cluster-binding domain BDGL_001130 PF04055 Radical SAM superfamily BDGL_001131 PF01244 Membrane dipeptidase (Peptidase family M19) BDGL_001134 PF00873 AcrB/AcrD/AcrF family BDGL_001135 PF00529 HlyD membrane-fusion protein of T1SS BDGL_001135 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BDGL_001136 PF00072 Response regulator receiver domain BDGL_001136 PF00486 Transcriptional regulatory protein, C terminal BDGL_001137 PF16527 Two-component sensor protein CpxA, periplasmic domain BDGL_001137 PF00672 HAMP domain BDGL_001137 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BDGL_001137 PF00512 His Kinase A (phospho-acceptor) domain BDGL_001139 PF13091 PLD-like domain BDGL_001143 PF00199 Catalase BDGL_001145 PF08240 Alcohol dehydrogenase GroES-like domain BDGL_001145 PF00107 Zinc-binding dehydrogenase BDGL_001147 PF00419 Fimbrial protein BDGL_001148 PF13954 PapC N-terminal domain BDGL_001148 PF00577 Outer membrane usher protein BDGL_001148 PF13953 PapC C-terminal domain BDGL_001149 PF02753 Pili assembly chaperone PapD, C-terminal domain BDGL_001149 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BDGL_001150 PF16970 Type-1 fimbrial protein, A BDGL_001154 PF00296 Luciferase-like monooxygenase BDGL_001155 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BDGL_001156 PF00528 Binding-protein-dependent transport system inner membrane component BDGL_001157 PF12911 N-terminal TM domain of oligopeptide transport permease C BDGL_001157 PF00528 Binding-protein-dependent transport system inner membrane component BDGL_001158 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BDGL_001158 PF00005 ABC transporter BDGL_001159 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BDGL_001159 PF02770 Acyl-CoA dehydrogenase, middle domain BDGL_001159 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BDGL_001161 PF00005 ABC transporter BDGL_001161 PF00664 ABC transporter transmembrane region BDGL_001162 PF00664 ABC transporter transmembrane region BDGL_001162 PF00005 ABC transporter BDGL_001164 PF00593 TonB dependent receptor BDGL_001164 PF07715 TonB-dependent Receptor Plug Domain BDGL_001166 PF00296 Luciferase-like monooxygenase BDGL_001167 PF00158 Sigma-54 interaction domain BDGL_001168 PF00902 Sec-independent protein translocase protein (TatC) BDGL_001169 PF02416 mttA/Hcf106 family BDGL_001170 PF02416 mttA/Hcf106 family BDGL_001171 PF00005 ABC transporter BDGL_001172 PF00528 Binding-protein-dependent transport system inner membrane component BDGL_001173 PF00528 Binding-protein-dependent transport system inner membrane component BDGL_001174 PF09084 NMT1/THI5 like BDGL_001175 PF00296 Luciferase-like monooxygenase BDGL_001176 PF03544 Gram-negative bacterial TonB protein C-terminal BDGL_001177 PF01618 MotA/TolQ/ExbB proton channel family BDGL_001178 PF02472 Biopolymer transport protein ExbD/TolR BDGL_001179 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BDGL_001182 PF07715 TonB-dependent Receptor Plug Domain BDGL_001182 PF00593 TonB dependent receptor BDGL_001183 PF00296 Luciferase-like monooxygenase BDGL_001184 PF00528 Binding-protein-dependent transport system inner membrane component BDGL_001185 PF00005 ABC transporter BDGL_001186 PF03544 Gram-negative bacterial TonB protein C-terminal BDGL_001187 PF01618 MotA/TolQ/ExbB proton channel family BDGL_001188 PF02472 Biopolymer transport protein ExbD/TolR BDGL_001190 PF02668 Taurine catabolism dioxygenase TauD, TfdA family BDGL_001192 PF07715 TonB-dependent Receptor Plug Domain BDGL_001192 PF00593 TonB dependent receptor BDGL_001193 PF00296 Luciferase-like monooxygenase BDGL_001194 PF00248 Aldo/keto reductase family BDGL_001195 PF00593 TonB dependent receptor BDGL_001195 PF07715 TonB-dependent Receptor Plug Domain BDGL_001196 PF00884 Sulfatase BDGL_001197 PF00027 Cyclic nucleotide-binding domain BDGL_001197 PF13545 Crp-like helix-turn-helix domain BDGL_001198 PF02668 Taurine catabolism dioxygenase TauD, TfdA family BDGL_001202 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) BDGL_001202 PF00271 Helicase conserved C-terminal domain BDGL_001202 PF08463 EcoEI R protein C-terminal BDGL_001202 PF04851 Type III restriction enzyme, res subunit BDGL_001203 PF02384 N-6 DNA Methylase BDGL_001203 PF12161 HsdM N-terminal domain BDGL_001205 PF05594 Haemagluttinin repeat BDGL_001205 PF05860 haemagglutination activity domain BDGL_001205 PF13332 Hemagglutinin repeat BDGL_001205 PF04829 Pre-toxin domain with VENN motif BDGL_001205 PF15526 Novel toxin 21 BDGL_001207 PF04829 Pre-toxin domain with VENN motif BDGL_001207 PF13018 Extended Signal Peptide of Type V secretion system BDGL_001207 PF13018 Extended Signal Peptide of Type V secretion system BDGL_001207 PF04829 Pre-toxin domain with VENN motif BDGL_001207 PF05860 haemagglutination activity domain BDGL_001207 PF13332 Hemagglutinin repeat BDGL_001207 PF05860 haemagglutination activity domain BDGL_001207 PF13332 Hemagglutinin repeat BDGL_001208 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB BDGL_001208 PF08479 POTRA domain, ShlB-type BDGL_001208 PF17287 POTRA domain BDGL_001210 PF12833 Helix-turn-helix domain BDGL_001210 PF02311 AraC-like ligand binding domain BDGL_001211 PF12146 Serine aminopeptidase, S33 BDGL_001214 PF07690 Major Facilitator Superfamily BDGL_001216 PF02515 CoA-transferase family III BDGL_001217 PF00682 HMGL-like BDGL_001219 PF03600 Citrate transporter BDGL_001220 PF09339 IclR helix-turn-helix domain BDGL_001220 PF01614 Bacterial transcriptional regulator BDGL_001222 PF01037 Lrp/AsnC ligand binding domain BDGL_001230 PF13291 ACT domain BDGL_001230 PF02824 TGS domain BDGL_001230 PF04607 Region found in RelA / SpoT proteins BDGL_001232 PF01975 Survival protein SurE BDGL_001237 PF07690 Major Facilitator Superfamily BDGL_001238 PF13533 Biotin-lipoyl like BDGL_001241 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BDGL_001242 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BDGL_001242 PF14572 Phosphoribosyl synthetase-associated domain BDGL_001246 PF00005 ABC transporter BDGL_001247 PF01032 FecCD transport family BDGL_001250 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BDGL_001250 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BDGL_001251 PF07690 Major Facilitator Superfamily BDGL_001252 PF01370 NAD dependent epimerase/dehydratase family BDGL_001254 PF03466 LysR substrate binding domain BDGL_001254 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_001256 PF00920 Dehydratase family BDGL_001257 PF00920 Dehydratase family BDGL_001258 PF00171 Aldehyde dehydrogenase family BDGL_001259 PF00171 Aldehyde dehydrogenase family BDGL_001262 PF13533 Biotin-lipoyl like BDGL_001263 PF00324 Amino acid permease BDGL_001264 PF00171 Aldehyde dehydrogenase family BDGL_001265 PF00202 Aminotransferase class-III BDGL_001266 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_001266 PF03466 LysR substrate binding domain BDGL_001268 PF13018 Extended Signal Peptide of Type V secretion system BDGL_001268 PF04829 Pre-toxin domain with VENN motif BDGL_001268 PF13332 Hemagglutinin repeat BDGL_001268 PF05860 haemagglutination activity domain BDGL_001269 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB BDGL_001269 PF17287 POTRA domain BDGL_001269 PF08479 POTRA domain, ShlB-type BDGL_001274 PF03737 Aldolase/RraA BDGL_001275 PF03737 Aldolase/RraA BDGL_001276 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BDGL_001276 PF01842 ACT domain BDGL_001276 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BDGL_001277 PF07690 Major Facilitator Superfamily BDGL_001281 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_001281 PF03466 LysR substrate binding domain BDGL_001283 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) BDGL_001294 PF13193 AMP-binding enzyme C-terminal domain BDGL_001294 PF00501 AMP-binding enzyme BDGL_001296 PF12806 Acetyl-CoA dehydrogenase C-terminal like BDGL_001296 PF02770 Acyl-CoA dehydrogenase, middle domain BDGL_001296 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BDGL_001296 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BDGL_001297 PF01575 MaoC like domain BDGL_001298 PF00106 short chain dehydrogenase BDGL_001301 PF03466 LysR substrate binding domain BDGL_001301 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_001302 PF00440 Bacterial regulatory proteins, tetR family BDGL_001302 PF08359 YsiA-like protein, C-terminal region BDGL_001303 PF12706 Beta-lactamase superfamily domain BDGL_001306 PF07992 Pyridine nucleotide-disulphide oxidoreductase BDGL_001308 PF13411 MerR HTH family regulatory protein BDGL_001309 PF00106 short chain dehydrogenase BDGL_001310 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BDGL_001310 PF07992 Pyridine nucleotide-disulphide oxidoreductase BDGL_001311 PF00561 alpha/beta hydrolase fold BDGL_001313 PF00107 Zinc-binding dehydrogenase BDGL_001313 PF08240 Alcohol dehydrogenase GroES-like domain BDGL_001314 PF00171 Aldehyde dehydrogenase family BDGL_001315 PF01494 FAD binding domain BDGL_001316 PF00171 Aldehyde dehydrogenase family BDGL_001318 PF07690 Major Facilitator Superfamily BDGL_001319 PF00920 Dehydratase family BDGL_001320 PF00392 Bacterial regulatory proteins, gntR family BDGL_001320 PF07729 FCD domain BDGL_001322 PF03466 LysR substrate binding domain BDGL_001322 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_001323 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BDGL_001323 PF13378 Enolase C-terminal domain-like BDGL_001324 PF02426 Muconolactone delta-isomerase BDGL_001325 PF04444 Catechol dioxygenase N terminus BDGL_001325 PF00775 Dioxygenase BDGL_001326 PF01144 Coenzyme A transferase BDGL_001327 PF01144 Coenzyme A transferase BDGL_001328 PF00108 Thiolase, N-terminal domain BDGL_001328 PF02803 Thiolase, C-terminal domain BDGL_001329 PF12146 Serine aminopeptidase, S33 BDGL_001330 PF01804 Penicillin amidase BDGL_001331 PF00171 Aldehyde dehydrogenase family BDGL_001332 PF05199 GMC oxidoreductase BDGL_001332 PF00732 GMC oxidoreductase BDGL_001334 PF01179 Copper amine oxidase, enzyme domain BDGL_001334 PF02728 Copper amine oxidase, N3 domain BDGL_001334 PF02727 Copper amine oxidase, N2 domain BDGL_001334 PF07833 Copper amine oxidase N-terminal domain BDGL_001335 PF12833 Helix-turn-helix domain BDGL_001335 PF02311 AraC-like ligand binding domain BDGL_001336 PF01613 Flavin reductase like domain BDGL_001337 PF00175 Oxidoreductase NAD-binding domain BDGL_001337 PF00111 2Fe-2S iron-sulfur cluster binding domain BDGL_001340 PF00848 Ring hydroxylating alpha subunit (catalytic domain) BDGL_001340 PF00355 Rieske [2Fe-2S] domain BDGL_001343 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BDGL_001344 PF01425 Amidase BDGL_001346 PF07690 Major Facilitator Superfamily BDGL_001348 PF00106 short chain dehydrogenase BDGL_001351 PF02770 Acyl-CoA dehydrogenase, middle domain BDGL_001351 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BDGL_001351 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BDGL_001352 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_001352 PF03466 LysR substrate binding domain BDGL_001353 PF01614 Bacterial transcriptional regulator BDGL_001353 PF09339 IclR helix-turn-helix domain BDGL_001354 PF00753 Metallo-beta-lactamase superfamily BDGL_001355 PF00753 Metallo-beta-lactamase superfamily BDGL_001355 PF04273 Putative phosphatase (DUF442) BDGL_001357 PF04143 Sulphur transport BDGL_001359 PF13360 PQQ-like domain BDGL_001359 PF01011 PQQ enzyme repeat BDGL_001360 PF04966 Carbohydrate-selective porin, OprB family BDGL_001361 PF05048 Periplasmic copper-binding protein (NosD) BDGL_001362 PF01487 Type I 3-dehydroquinase BDGL_001363 PF00775 Dioxygenase BDGL_001364 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal BDGL_001364 PF00775 Dioxygenase BDGL_001365 PF02627 Carboxymuconolactone decarboxylase family BDGL_001366 PF07690 Major Facilitator Superfamily BDGL_001367 PF00561 alpha/beta hydrolase fold BDGL_001368 PF10397 Adenylosuccinate lyase C-terminus BDGL_001368 PF00206 Lyase BDGL_001369 PF02803 Thiolase, C-terminal domain BDGL_001369 PF00108 Thiolase, N-terminal domain BDGL_001370 PF01144 Coenzyme A transferase BDGL_001371 PF01144 Coenzyme A transferase BDGL_001372 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BDGL_001373 PF04977 Septum formation initiator BDGL_001374 PF07715 TonB-dependent Receptor Plug Domain BDGL_001374 PF00593 TonB dependent receptor BDGL_001376 PF04239 Protein of unknown function (DUF421) BDGL_001377 PF00113 Enolase, C-terminal TIM barrel domain BDGL_001377 PF03952 Enolase, N-terminal domain BDGL_001378 PF00793 DAHP synthetase I family BDGL_001379 PF06418 CTP synthase N-terminus BDGL_001379 PF00117 Glutamine amidotransferase class-I BDGL_001385 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BDGL_001385 PF07992 Pyridine nucleotide-disulphide oxidoreductase BDGL_001388 PF00793 DAHP synthetase I family BDGL_001389 PF02694 Uncharacterised BCR, YnfA/UPF0060 family BDGL_001390 PF17871 AAA lid domain BDGL_001390 PF07724 AAA domain (Cdc48 subfamily) BDGL_001390 PF00004 ATPase family associated with various cellular activities (AAA) BDGL_001390 PF10431 C-terminal, D2-small domain, of ClpB protein BDGL_001390 PF02861 Clp amino terminal domain, pathogenicity island component BDGL_001391 PF02617 ATP-dependent Clp protease adaptor protein ClpS BDGL_001393 PF01118 Semialdehyde dehydrogenase, NAD binding domain BDGL_001393 PF02774 Semialdehyde dehydrogenase, dimerisation domain BDGL_001396 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BDGL_001397 PF00585 C-terminal regulatory domain of Threonine dehydratase BDGL_001397 PF00291 Pyridoxal-phosphate dependent enzyme BDGL_001398 PF02080 TrkA-C domain BDGL_001398 PF02254 TrkA-N domain BDGL_001399 PF02386 Cation transport protein BDGL_001400 PF02253 Phospholipase A1 BDGL_001401 PF08367 Peptidase M16C associated BDGL_001401 PF00675 Insulinase (Peptidase family M16) BDGL_001401 PF05193 Peptidase M16 inactive domain BDGL_001402 PF00294 pfkB family carbohydrate kinase BDGL_001404 PF07290 Protein of unknown function (DUF1449) BDGL_001405 PF01654 Cytochrome bd terminal oxidase subunit I BDGL_001406 PF02322 Cytochrome bd terminal oxidase subunit II BDGL_001410 PF02881 SRP54-type protein, helical bundle domain BDGL_001410 PF00448 SRP54-type protein, GTPase domain BDGL_001415 PF00571 CBS domain BDGL_001415 PF01380 SIS domain BDGL_001416 PF00202 Aminotransferase class-III BDGL_001417 PF00462 Glutaredoxin BDGL_001419 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_001419 PF03466 LysR substrate binding domain BDGL_001420 PF00557 Metallopeptidase family M24 BDGL_001421 PF05525 Branched-chain amino acid transport protein BDGL_001422 PF03928 Haem-degrading BDGL_001425 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BDGL_001425 PF05524 PEP-utilising enzyme, N-terminal BDGL_001425 PF00381 PTS HPr component phosphorylation site BDGL_001425 PF02896 PEP-utilising enzyme, TIM barrel domain BDGL_001425 PF00391 PEP-utilising enzyme, mobile domain BDGL_001426 PF00294 pfkB family carbohydrate kinase BDGL_001427 PF02378 Phosphotransferase system, EIIC BDGL_001427 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BDGL_001430 PF00563 EAL domain BDGL_001430 PF00990 Diguanylate cyclase, GGDEF domain BDGL_001430 PF03707 Bacterial signalling protein N terminal repeat BDGL_001432 PF07995 Glucose / Sorbosone dehydrogenase BDGL_001434 PF00916 Sulfate permease family BDGL_001434 PF01740 STAS domain BDGL_001435 PF05922 Peptidase inhibitor I9 BDGL_001435 PF00082 Subtilase family BDGL_001437 PF00324 Amino acid permease BDGL_001438 PF00266 Aminotransferase class-V BDGL_001439 PF01037 Lrp/AsnC ligand binding domain BDGL_001442 PF13419 Haloacid dehalogenase-like hydrolase BDGL_001443 PF01479 S4 domain BDGL_001444 PF00154 recA bacterial DNA recombination protein BDGL_001445 PF02631 RecX family BDGL_001447 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 BDGL_001447 PF00132 Bacterial transferase hexapeptide (six repeats) BDGL_001448 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 BDGL_001448 PF00132 Bacterial transferase hexapeptide (six repeats) BDGL_001449 PF07977 FabA-like domain BDGL_001450 PF00132 Bacterial transferase hexapeptide (six repeats) BDGL_001450 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD BDGL_001452 PF01103 Surface antigen BDGL_001452 PF07244 Surface antigen variable number repeat BDGL_001453 PF17820 PDZ domain BDGL_001453 PF02163 Peptidase family M50 BDGL_001454 PF02163 Peptidase family M50 BDGL_001454 PF13180 PDZ domain BDGL_001454 PF17820 PDZ domain BDGL_001455 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BDGL_001455 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BDGL_001455 PF13288 DXP reductoisomerase C-terminal domain BDGL_001457 PF01255 Putative undecaprenyl diphosphate synthase BDGL_001458 PF01765 Ribosome recycling factor BDGL_001459 PF00696 Amino acid kinase family BDGL_001460 PF00919 Uncharacterized protein family UPF0004 BDGL_001460 PF18693 TRAM domain BDGL_001460 PF04055 Radical SAM superfamily BDGL_001462 PF00989 PAS fold BDGL_001462 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BDGL_001462 PF00512 His Kinase A (phospho-acceptor) domain BDGL_001463 PF00158 Sigma-54 interaction domain BDGL_001463 PF02954 Bacterial regulatory protein, Fis family BDGL_001463 PF00072 Response regulator receiver domain BDGL_001464 PF00440 Bacterial regulatory proteins, tetR family BDGL_001465 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BDGL_001465 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BDGL_001467 PF02542 YgbB family BDGL_001469 PF01266 FAD dependent oxidoreductase BDGL_001472 PF00561 alpha/beta hydrolase fold BDGL_001475 PF00206 Lyase BDGL_001475 PF10415 Fumarase C C-terminus BDGL_001476 PF16363 GDP-mannose 4,6 dehydratase BDGL_001477 PF02635 DsrE/DsrF-like family BDGL_001481 PF00892 EamA-like transporter family BDGL_001482 PF00392 Bacterial regulatory proteins, gntR family BDGL_001482 PF00155 Aminotransferase class I and II BDGL_001483 PF01638 HxlR-like helix-turn-helix BDGL_001484 PF03454 MoeA C-terminal region (domain IV) BDGL_001484 PF03453 MoeA N-terminal region (domain I and II) BDGL_001484 PF00994 Probable molybdopterin binding domain BDGL_001485 PF01967 MoaC family BDGL_001485 PF00994 Probable molybdopterin binding domain BDGL_001486 PF02391 MoaE protein BDGL_001488 PF04055 Radical SAM superfamily BDGL_001488 PF06463 Molybdenum Cofactor Synthesis C BDGL_001489 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BDGL_001489 PF00384 Molybdopterin oxidoreductase BDGL_001489 PF01568 Molydopterin dinucleotide binding domain BDGL_001490 PF12804 MobA-like NTP transferase domain BDGL_001491 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BDGL_001491 PF04324 BFD-like [2Fe-2S] binding domain BDGL_001491 PF01568 Molydopterin dinucleotide binding domain BDGL_001491 PF00384 Molybdopterin oxidoreductase BDGL_001492 PF04324 BFD-like [2Fe-2S] binding domain BDGL_001492 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BDGL_001492 PF07992 Pyridine nucleotide-disulphide oxidoreductase BDGL_001492 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BDGL_001492 PF18267 Rubredoxin NAD+ reductase C-terminal domain BDGL_001493 PF13806 Rieske-like [2Fe-2S] domain BDGL_001493 PF07992 Pyridine nucleotide-disulphide oxidoreductase BDGL_001493 PF18267 Rubredoxin NAD+ reductase C-terminal domain BDGL_001493 PF04324 BFD-like [2Fe-2S] binding domain BDGL_001493 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BDGL_001493 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BDGL_001495 PF00005 ABC transporter BDGL_001497 PF00291 Pyridoxal-phosphate dependent enzyme BDGL_001498 PF02423 Ornithine cyclodeaminase/mu-crystallin family BDGL_001499 PF04183 IucA / IucC family BDGL_001499 PF06276 Ferric iron reductase FhuF-like transporter BDGL_001500 PF07690 Major Facilitator Superfamily BDGL_001501 PF06276 Ferric iron reductase FhuF-like transporter BDGL_001501 PF04183 IucA / IucC family BDGL_001502 PF03328 HpcH/HpaI aldolase/citrate lyase family BDGL_001503 PF00593 TonB dependent receptor BDGL_001503 PF07715 TonB-dependent Receptor Plug Domain BDGL_001504 PF13438 Domain of unknown function (DUF4113) BDGL_001504 PF11799 impB/mucB/samB family C-terminal domain BDGL_001504 PF00817 impB/mucB/samB family BDGL_001505 PF01220 Dehydroquinase class II BDGL_001506 PF00364 Biotin-requiring enzyme BDGL_001507 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BDGL_001507 PF00289 Biotin carboxylase, N-terminal domain BDGL_001507 PF02785 Biotin carboxylase C-terminal domain BDGL_001509 PF12832 MFS_1 like family BDGL_001511 PF00577 Outer membrane usher protein BDGL_001511 PF13954 PapC N-terminal domain BDGL_001511 PF13953 PapC C-terminal domain BDGL_001514 PF01645 Conserved region in glutamate synthase BDGL_001519 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BDGL_001519 PF01565 FAD binding domain BDGL_001520 PF01451 Low molecular weight phosphotyrosine protein phosphatase BDGL_001521 PF01638 HxlR-like helix-turn-helix BDGL_001524 PF00465 Iron-containing alcohol dehydrogenase BDGL_001525 PF03061 Thioesterase superfamily BDGL_001526 PF04185 Phosphoesterase family BDGL_001526 PF05506 Domain of unknown function (DUF756) BDGL_001527 PF12169 DNA polymerase III subunits gamma and tau domain III BDGL_001527 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding BDGL_001527 PF12170 DNA polymerase III tau subunit V interacting with alpha BDGL_001530 PF07690 Major Facilitator Superfamily BDGL_001532 PF00144 Beta-lactamase BDGL_001533 PF01575 MaoC like domain BDGL_001535 PF02803 Thiolase, C-terminal domain BDGL_001535 PF00108 Thiolase, N-terminal domain BDGL_001537 PF03466 LysR substrate binding domain BDGL_001537 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_001538 PF00923 Transaldolase/Fructose-6-phosphate aldolase BDGL_001538 PF13202 EF hand BDGL_001539 PF01810 LysE type translocator BDGL_001540 PF01037 Lrp/AsnC ligand binding domain BDGL_001541 PF03594 Benzoate membrane transport protein BDGL_001545 PF00582 Universal stress protein family BDGL_001546 PF00005 ABC transporter BDGL_001546 PF12848 ABC transporter BDGL_001547 PF04151 Bacterial pre-peptidase C-terminal domain BDGL_001553 PF03466 LysR substrate binding domain BDGL_001553 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_001558 PF00959 Phage lysozyme BDGL_001563 PF00117 Glutamine amidotransferase class-I BDGL_001566 PF13640 2OG-Fe(II) oxygenase superfamily BDGL_001566 PF18331 PKHD-type hydroxylase C-terminal domain BDGL_001567 PF00593 TonB dependent receptor BDGL_001567 PF07715 TonB-dependent Receptor Plug Domain BDGL_001568 PF00593 TonB dependent receptor BDGL_001568 PF07660 Secretin and TonB N terminus short domain BDGL_001568 PF07715 TonB-dependent Receptor Plug Domain BDGL_001569 PF01817 Chorismate mutase type II BDGL_001575 PF13953 PapC C-terminal domain BDGL_001575 PF13954 PapC N-terminal domain BDGL_001575 PF00577 Outer membrane usher protein BDGL_001578 PF17432 Domain of unknown function (DUF3458_C) ARM repeats BDGL_001578 PF01433 Peptidase family M1 domain BDGL_001578 PF11940 Domain of unknown function (DUF3458) Ig-like fold BDGL_001581 PF02110 Hydroxyethylthiazole kinase family BDGL_001583 PF05970 PIF1-like helicase BDGL_001583 PF14493 Helix-turn-helix domain BDGL_001584 PF00465 Iron-containing alcohol dehydrogenase BDGL_001587 PF00171 Aldehyde dehydrogenase family BDGL_001588 PF13520 Amino acid permease BDGL_001589 PF06751 Ethanolamine ammonia lyase large subunit (EutB) BDGL_001590 PF05985 Ethanolamine ammonia-lyase light chain (EutC) BDGL_001591 PF00958 GMP synthase C terminal domain BDGL_001591 PF02540 NAD synthase BDGL_001591 PF00117 Glutamine amidotransferase class-I BDGL_001592 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain BDGL_001592 PF00749 tRNA synthetases class I (E and Q), catalytic domain BDGL_001593 PF00749 tRNA synthetases class I (E and Q), catalytic domain BDGL_001593 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain BDGL_001594 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BDGL_001595 PF00149 Calcineurin-like phosphoesterase BDGL_001597 PF00881 Nitroreductase family BDGL_001599 PF17209 Hfq protein BDGL_001601 PF01119 DNA mismatch repair protein, C-terminal domain BDGL_001601 PF08676 MutL C terminal dimerisation domain BDGL_001602 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BDGL_001603 PF00849 RNA pseudouridylate synthase BDGL_001603 PF01479 S4 domain BDGL_001606 PF00849 RNA pseudouridylate synthase BDGL_001606 PF01479 S4 domain BDGL_001608 PF04284 Protein of unknown function (DUF441) BDGL_001609 PF03466 LysR substrate binding domain BDGL_001609 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_001612 PF07690 Major Facilitator Superfamily BDGL_001613 PF00520 Ion transport protein BDGL_001613 PF00027 Cyclic nucleotide-binding domain BDGL_001615 PF11791 Aconitate B N-terminal domain BDGL_001615 PF06434 Aconitate hydratase 2 N-terminus BDGL_001615 PF00330 Aconitase family (aconitate hydratase) BDGL_001619 PF07244 Surface antigen variable number repeat BDGL_001619 PF01103 Surface antigen BDGL_001619 PF17243 POTRA domain TamA domain 1 BDGL_001620 PF07690 Major Facilitator Superfamily BDGL_001621 PF03232 Ubiquinone biosynthesis protein COQ7 BDGL_001623 PF00120 Glutamine synthetase, catalytic domain BDGL_001624 PF00486 Transcriptional regulatory protein, C terminal BDGL_001624 PF00072 Response regulator receiver domain BDGL_001625 PF00512 His Kinase A (phospho-acceptor) domain BDGL_001625 PF02702 Osmosensitive K+ channel His kinase sensor domain BDGL_001625 PF13493 Domain of unknown function (DUF4118) BDGL_001625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BDGL_001626 PF02669 K+-transporting ATPase, c chain BDGL_001628 PF03814 Potassium-transporting ATPase A subunit BDGL_001630 PF02152 Dihydroneopterin aldolase BDGL_001631 PF03109 ABC1 family BDGL_001632 PF00899 ThiF family BDGL_001633 PF01613 Flavin reductase like domain BDGL_001634 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BDGL_001634 PF02770 Acyl-CoA dehydrogenase, middle domain BDGL_001634 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BDGL_001635 PF00106 short chain dehydrogenase BDGL_001636 PF12833 Helix-turn-helix domain BDGL_001637 PF09084 NMT1/THI5 like BDGL_001638 PF00528 Binding-protein-dependent transport system inner membrane component BDGL_001639 PF13847 Methyltransferase domain BDGL_001639 PF17827 PrmC N-terminal domain BDGL_001640 PF00472 RF-1 domain BDGL_001640 PF03462 PCRF domain BDGL_001642 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_001642 PF03466 LysR substrate binding domain BDGL_001645 PF00296 Luciferase-like monooxygenase BDGL_001647 PF13994 PgaD-like protein BDGL_001648 PF00535 Glycosyl transferase family 2 BDGL_001649 PF14883 Hypothetical glycosyl hydrolase family 13 BDGL_001649 PF01522 Polysaccharide deacetylase BDGL_001651 PF03618 Kinase/pyrophosphorylase BDGL_001652 PF00391 PEP-utilising enzyme, mobile domain BDGL_001652 PF02896 PEP-utilising enzyme, TIM barrel domain BDGL_001652 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BDGL_001654 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BDGL_001654 PF06481 COX Aromatic Rich Motif BDGL_001655 PF00115 Cytochrome C and Quinol oxidase polypeptide I BDGL_001656 PF00510 Cytochrome c oxidase subunit III BDGL_001657 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BDGL_001658 PF01040 UbiA prenyltransferase family BDGL_001659 PF01250 Ribosomal protein S6 BDGL_001660 PF01084 Ribosomal protein S18 BDGL_001661 PF03948 Ribosomal protein L9, C-terminal domain BDGL_001661 PF01281 Ribosomal protein L9, N-terminal domain BDGL_001662 PF03796 DnaB-like helicase C terminal domain BDGL_001662 PF00772 DnaB-like helicase N terminal domain BDGL_001663 PF00842 Alanine racemase, C-terminal domain BDGL_001663 PF01168 Alanine racemase, N-terminal domain BDGL_001665 PF01841 Transglutaminase-like superfamily BDGL_001665 PF08379 Bacterial transglutaminase-like N-terminal region BDGL_001667 PF14403 Circularly permuted ATP-grasp type 2 BDGL_001670 PF13932 GidA associated domain BDGL_001670 PF01134 Glucose inhibited division protein A BDGL_001674 PF02954 Bacterial regulatory protein, Fis family BDGL_001675 PF01808 AICARFT/IMPCHase bienzyme BDGL_001675 PF02142 MGS-like domain BDGL_001676 PF02844 Phosphoribosylglycinamide synthetase, N domain BDGL_001676 PF02843 Phosphoribosylglycinamide synthetase, C domain BDGL_001676 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BDGL_001677 PF03180 NLPA lipoprotein BDGL_001678 PF09383 NIL domain BDGL_001678 PF00005 ABC transporter BDGL_001679 PF00528 Binding-protein-dependent transport system inner membrane component BDGL_001680 PF00753 Metallo-beta-lactamase superfamily BDGL_001680 PF16123 Hydroxyacylglutathione hydrolase C-terminus BDGL_001682 PF00375 Sodium:dicarboxylate symporter family BDGL_001686 PF03466 LysR substrate binding domain BDGL_001686 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_001687 PF07690 Major Facilitator Superfamily BDGL_001688 PF01494 FAD binding domain BDGL_001689 PF07995 Glucose / Sorbosone dehydrogenase BDGL_001693 PF03601 Conserved hypothetical protein 698 BDGL_001696 PF07690 Major Facilitator Superfamily BDGL_001697 PF05853 beta-keto acid cleavage enzyme BDGL_001698 PF02668 Taurine catabolism dioxygenase TauD, TfdA family BDGL_001699 PF00107 Zinc-binding dehydrogenase BDGL_001699 PF08240 Alcohol dehydrogenase GroES-like domain BDGL_001700 PF01177 Asp/Glu/Hydantoin racemase BDGL_001703 PF00072 Response regulator receiver domain BDGL_001703 PF00486 Transcriptional regulatory protein, C terminal BDGL_001704 PF08521 Two-component sensor kinase N-terminal BDGL_001704 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BDGL_001704 PF00512 His Kinase A (phospho-acceptor) domain BDGL_001713 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BDGL_001713 PF00672 HAMP domain BDGL_001713 PF00512 His Kinase A (phospho-acceptor) domain BDGL_001714 PF00072 Response regulator receiver domain BDGL_001714 PF00486 Transcriptional regulatory protein, C terminal BDGL_001716 PF00576 HIUase/Transthyretin family BDGL_001720 PF02470 MlaD protein BDGL_001721 PF04403 Paraquat-inducible protein A BDGL_001723 PF02080 TrkA-C domain BDGL_001723 PF06826 Predicted Permease Membrane Region BDGL_001724 PF00155 Aminotransferase class I and II BDGL_001725 PF00440 Bacterial regulatory proteins, tetR family BDGL_001727 PF02254 TrkA-N domain BDGL_001727 PF00999 Sodium/hydrogen exchanger family BDGL_001728 PF03616 Sodium/glutamate symporter BDGL_001729 PF00561 alpha/beta hydrolase fold BDGL_001732 PF00313 'Cold-shock' DNA-binding domain BDGL_001733 PF00069 Protein kinase domain BDGL_001733 PF03793 PASTA domain BDGL_001737 PF00814 Glycoprotease family BDGL_001738 PF01165 Ribosomal protein S21 BDGL_001739 PF09424 Yqey-like protein BDGL_001740 PF01435 Peptidase family M48 BDGL_001741 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BDGL_001741 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BDGL_001744 PF00156 Phosphoribosyl transferase domain BDGL_001745 PF02674 Colicin V production protein BDGL_001746 PF01180 Dihydroorotate dehydrogenase BDGL_001750 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BDGL_001750 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BDGL_001751 PF00881 Nitroreductase family BDGL_001753 PF00270 DEAD/DEAH box helicase BDGL_001753 PF00271 Helicase conserved C-terminal domain BDGL_001754 PF00313 'Cold-shock' DNA-binding domain BDGL_001757 PF04545 Sigma-70, region 4 BDGL_001757 PF04542 Sigma-70 region 2 BDGL_001757 PF00140 Sigma-70 factor, region 1.2 BDGL_001758 PF04241 Protein of unknown function (DUF423) BDGL_001760 PF05690 Thiazole biosynthesis protein ThiG BDGL_001762 PF03883 Peroxide stress protein YaaA BDGL_001764 PF00753 Metallo-beta-lactamase superfamily BDGL_001765 PF07687 Peptidase dimerisation domain BDGL_001765 PF01546 Peptidase family M20/M25/M40 BDGL_001767 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BDGL_001768 PF00800 Prephenate dehydratase BDGL_001768 PF01842 ACT domain BDGL_001768 PF01817 Chorismate mutase type II BDGL_001771 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BDGL_001771 PF02770 Acyl-CoA dehydrogenase, middle domain BDGL_001771 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BDGL_001772 PF00375 Sodium:dicarboxylate symporter family BDGL_001773 PF00591 Glycosyl transferase family, a/b domain BDGL_001773 PF02885 Glycosyl transferase family, helical bundle domain BDGL_001774 PF07023 Protein of unknown function (DUF1315) BDGL_001775 PF01513 ATP-NAD kinase BDGL_001776 PF14814 Bifunctional transglycosylase second domain BDGL_001776 PF00912 Transglycosylase BDGL_001776 PF00905 Penicillin binding protein transpeptidase domain BDGL_001778 PF00293 NUDIX domain BDGL_001780 PF08521 Two-component sensor kinase N-terminal BDGL_001780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BDGL_001780 PF00512 His Kinase A (phospho-acceptor) domain BDGL_001781 PF00486 Transcriptional regulatory protein, C terminal BDGL_001781 PF00072 Response regulator receiver domain BDGL_001783 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BDGL_001783 PF00437 Type II/IV secretion system protein BDGL_001785 PF18389 TrmO C-terminal domain BDGL_001785 PF01980 tRNA-methyltransferase O BDGL_001786 PF00175 Oxidoreductase NAD-binding domain BDGL_001786 PF00970 Oxidoreductase FAD-binding domain BDGL_001787 PF02567 Phenazine biosynthesis-like protein BDGL_001788 PF00155 Aminotransferase class I and II BDGL_001788 PF00392 Bacterial regulatory proteins, gntR family BDGL_001789 PF01136 Peptidase family U32 BDGL_001789 PF16325 Peptidase family U32 C-terminal domain BDGL_001790 PF00037 4Fe-4S binding domain BDGL_001791 PF00893 Small Multidrug Resistance protein BDGL_001792 PF00005 ABC transporter BDGL_001793 PF00528 Binding-protein-dependent transport system inner membrane component BDGL_001794 PF00528 Binding-protein-dependent transport system inner membrane component BDGL_001795 PF00497 Bacterial extracellular solute-binding proteins, family 3 BDGL_001796 PF03466 LysR substrate binding domain BDGL_001796 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_001797 PF13533 Biotin-lipoyl like BDGL_001798 PF00873 AcrB/AcrD/AcrF family BDGL_001799 PF02321 Outer membrane efflux protein BDGL_001800 PF00464 Serine hydroxymethyltransferase BDGL_001805 PF00005 ABC transporter BDGL_001806 PF01061 ABC-2 type transporter BDGL_001807 PF14489 QueF-like protein BDGL_001807 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term BDGL_001809 PF01098 Cell cycle protein BDGL_001810 PF13406 Transglycosylase SLT domain BDGL_001811 PF05036 Sporulation related domain BDGL_001811 PF03330 Lytic transglycolase BDGL_001814 PF12833 Helix-turn-helix domain BDGL_001816 PF00889 Elongation factor TS BDGL_001817 PF00318 Ribosomal protein S2 BDGL_001818 PF00557 Metallopeptidase family M24 BDGL_001820 PF07690 Major Facilitator Superfamily BDGL_001822 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BDGL_001822 PF07992 Pyridine nucleotide-disulphide oxidoreductase BDGL_001823 PF04055 Radical SAM superfamily BDGL_001824 PF09317 Domain of unknown function (DUF1974) BDGL_001824 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BDGL_001824 PF02770 Acyl-CoA dehydrogenase, middle domain BDGL_001824 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BDGL_001827 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BDGL_001827 PF05221 S-adenosyl-L-homocysteine hydrolase BDGL_001828 PF02219 Methylenetetrahydrofolate reductase BDGL_001829 PF04452 RNA methyltransferase BDGL_001830 PF00563 EAL domain BDGL_001830 PF03707 Bacterial signalling protein N terminal repeat BDGL_001830 PF00990 Diguanylate cyclase, GGDEF domain BDGL_001831 PF01515 Phosphate acetyl/butaryl transferase BDGL_001831 PF03949 Malic enzyme, NAD binding domain BDGL_001831 PF00390 Malic enzyme, N-terminal domain BDGL_001832 PF01743 Poly A polymerase head domain BDGL_001832 PF12627 Probable RNA and SrmB- binding site of polymerase A BDGL_001833 PF13180 PDZ domain BDGL_001834 PF01784 NIF3 (NGG1p interacting factor 3) BDGL_001835 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BDGL_001835 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BDGL_001839 PF01040 UbiA prenyltransferase family BDGL_001840 PF04345 Chorismate lyase BDGL_001841 PF00120 Glutamine synthetase, catalytic domain BDGL_001841 PF03951 Glutamine synthetase, beta-Grasp domain BDGL_001842 PF00854 POT family BDGL_001844 PF00117 Glutamine amidotransferase class-I BDGL_001845 PF11838 ERAP1-like C-terminal domain BDGL_001845 PF01433 Peptidase family M1 domain BDGL_001846 PF07715 TonB-dependent Receptor Plug Domain BDGL_001846 PF00593 TonB dependent receptor BDGL_001847 PF00591 Glycosyl transferase family, a/b domain BDGL_001847 PF02885 Glycosyl transferase family, helical bundle domain BDGL_001848 PF00218 Indole-3-glycerol phosphate synthase BDGL_001849 PF01713 Smr domain BDGL_001851 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BDGL_001851 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BDGL_001852 PF00111 2Fe-2S iron-sulfur cluster binding domain BDGL_001852 PF01799 [2Fe-2S] binding domain BDGL_001853 PF01227 GTP cyclohydrolase I BDGL_001854 PF00144 Beta-lactamase BDGL_001857 PF05675 Protein of unknown function (DUF817) BDGL_001858 PF01208 Uroporphyrinogen decarboxylase (URO-D) BDGL_001860 PF00425 chorismate binding enzyme BDGL_001861 PF17837 4'-phosphopantetheinyl transferase N-terminal domain BDGL_001861 PF01648 4'-phosphopantetheinyl transferase superfamily BDGL_001862 PF00975 Thioesterase domain BDGL_001863 PF00005 ABC transporter BDGL_001864 PF00005 ABC transporter BDGL_001864 PF00664 ABC transporter transmembrane region BDGL_001866 PF00282 Pyridoxal-dependent decarboxylase conserved domain BDGL_001867 PF00282 Pyridoxal-dependent decarboxylase conserved domain BDGL_001868 PF00550 Phosphopantetheine attachment site BDGL_001868 PF00857 Isochorismatase family BDGL_001869 PF13193 AMP-binding enzyme C-terminal domain BDGL_001869 PF00501 AMP-binding enzyme BDGL_001870 PF00501 AMP-binding enzyme BDGL_001870 PF00668 Condensation domain BDGL_001870 PF00550 Phosphopantetheine attachment site BDGL_001871 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) BDGL_001872 PF07715 TonB-dependent Receptor Plug Domain BDGL_001872 PF00593 TonB dependent receptor BDGL_001873 PF01497 Periplasmic binding protein BDGL_001874 PF00005 ABC transporter BDGL_001875 PF01032 FecCD transport family BDGL_001876 PF01032 FecCD transport family BDGL_001877 PF13193 AMP-binding enzyme C-terminal domain BDGL_001877 PF00501 AMP-binding enzyme BDGL_001877 PF00668 Condensation domain BDGL_001877 PF00550 Phosphopantetheine attachment site BDGL_001877 PF00975 Thioesterase domain BDGL_001878 PF00550 Phosphopantetheine attachment site BDGL_001878 PF00501 AMP-binding enzyme BDGL_001878 PF00668 Condensation domain BDGL_001878 PF13193 AMP-binding enzyme C-terminal domain BDGL_001880 PF02678 Pirin BDGL_001880 PF17954 Quercetinase C-terminal cupin domain BDGL_001888 PF04328 Selenoprotein, putative BDGL_001889 PF13722 5TM C-terminal transporter carbon starvation CstA BDGL_001889 PF02554 Carbon starvation protein CstA BDGL_001890 PF01132 Elongation factor P (EF-P) OB domain BDGL_001890 PF08207 Elongation factor P (EF-P) KOW-like domain BDGL_001890 PF09285 Elongation factor P, C-terminal BDGL_001891 PF04055 Radical SAM superfamily BDGL_001892 PF04055 Radical SAM superfamily BDGL_001895 PF01197 Ribosomal protein L31 BDGL_001896 PF13593 SBF-like CPA transporter family (DUF4137) BDGL_001897 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BDGL_001898 PF07690 Major Facilitator Superfamily BDGL_001899 PF13654 AAA domain BDGL_001899 PF05362 Lon protease (S16) C-terminal proteolytic domain BDGL_001900 PF03466 LysR substrate binding domain BDGL_001900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_001901 PF01476 LysM domain BDGL_001901 PF01551 Peptidase family M23 BDGL_001902 PF01975 Survival protein SurE BDGL_001905 PF00768 D-alanyl-D-alanine carboxypeptidase BDGL_001905 PF07943 Penicillin-binding protein 5, C-terminal domain BDGL_001906 PF00132 Bacterial transferase hexapeptide (six repeats) BDGL_001907 PF13344 Haloacid dehalogenase-like hydrolase BDGL_001907 PF00293 NUDIX domain BDGL_001909 PF04356 Protein of unknown function (DUF489) BDGL_001910 PF00206 Lyase BDGL_001910 PF08328 Adenylosuccinate lyase C-terminal BDGL_001913 PF01343 Peptidase family S49 BDGL_001913 PF08496 Peptidase family S49 N-terminal BDGL_001914 PF00005 ABC transporter BDGL_001915 PF00528 Binding-protein-dependent transport system inner membrane component BDGL_001916 PF00528 Binding-protein-dependent transport system inner membrane component BDGL_001917 PF12849 PBP superfamily domain BDGL_001918 PF00324 Amino acid permease BDGL_001919 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BDGL_001919 PF00205 Thiamine pyrophosphate enzyme, central domain BDGL_001919 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BDGL_001920 PF01037 Lrp/AsnC ligand binding domain BDGL_001921 PF00171 Aldehyde dehydrogenase family BDGL_001922 PF00282 Pyridoxal-dependent decarboxylase conserved domain BDGL_001923 PF00202 Aminotransferase class-III BDGL_001925 PF00487 Fatty acid desaturase BDGL_001926 PF00175 Oxidoreductase NAD-binding domain BDGL_001926 PF00111 2Fe-2S iron-sulfur cluster binding domain BDGL_001926 PF00970 Oxidoreductase FAD-binding domain BDGL_001927 PF00440 Bacterial regulatory proteins, tetR family BDGL_001929 PF12137 RNA polymerase recycling family C-terminal BDGL_001929 PF00271 Helicase conserved C-terminal domain BDGL_001929 PF18339 RapA N-terminal Tudor like domain 1 BDGL_001929 PF00176 SNF2 family N-terminal domain BDGL_001929 PF18337 RapA N-terminal Tudor like domain BDGL_001930 PF00849 RNA pseudouridylate synthase BDGL_001932 PF00202 Aminotransferase class-III BDGL_001933 PF02581 Thiamine monophosphate synthase BDGL_001940 PF05193 Peptidase M16 inactive domain BDGL_001940 PF00675 Insulinase (Peptidase family M16) BDGL_001941 PF02567 Phenazine biosynthesis-like protein BDGL_001942 PF00375 Sodium:dicarboxylate symporter family BDGL_001943 PF03466 LysR substrate binding domain BDGL_001943 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_001944 PF06779 Uncharacterised MFS-type transporter YbfB BDGL_001946 PF00180 Isocitrate/isopropylmalate dehydrogenase BDGL_001947 PF00849 RNA pseudouridylate synthase BDGL_001948 PF03971 Monomeric isocitrate dehydrogenase BDGL_001949 PF03971 Monomeric isocitrate dehydrogenase BDGL_001950 PF03971 Monomeric isocitrate dehydrogenase BDGL_001952 PF07943 Penicillin-binding protein 5, C-terminal domain BDGL_001952 PF00768 D-alanyl-D-alanine carboxypeptidase BDGL_001953 PF07992 Pyridine nucleotide-disulphide oxidoreductase BDGL_001954 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BDGL_001955 PF00875 DNA photolyase BDGL_001955 PF03441 FAD binding domain of DNA photolyase BDGL_001963 PF03060 Nitronate monooxygenase BDGL_001964 PF01207 Dihydrouridine synthase (Dus) BDGL_001965 PF07759 Protein of unknown function (DUF1615) BDGL_001967 PF01472 PUA domain BDGL_001967 PF00696 Amino acid kinase family BDGL_001968 PF01018 GTP1/OBG BDGL_001968 PF01926 50S ribosome-binding GTPase BDGL_001971 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BDGL_001971 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BDGL_001972 PF00892 EamA-like transporter family BDGL_001974 PF12344 Ultra-violet resistance protein B BDGL_001974 PF17757 UvrB interaction domain BDGL_001974 PF00271 Helicase conserved C-terminal domain BDGL_001974 PF04851 Type III restriction enzyme, res subunit BDGL_001974 PF02151 UvrB/uvrC motif BDGL_001976 PF17151 Periplasmic sensor domain BDGL_001976 PF00990 Diguanylate cyclase, GGDEF domain BDGL_001978 PF00155 Aminotransferase class I and II BDGL_001979 PF00892 EamA-like transporter family BDGL_001983 PF00106 short chain dehydrogenase BDGL_001984 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) BDGL_001985 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ BDGL_001986 PF02565 Recombination protein O C terminal BDGL_001986 PF11967 Recombination protein O N terminal BDGL_001988 PF01926 50S ribosome-binding GTPase BDGL_001988 PF07650 KH domain BDGL_001989 PF14622 Ribonuclease-III-like BDGL_001989 PF00035 Double-stranded RNA binding motif BDGL_001991 PF10502 Signal peptidase, peptidase S26 BDGL_001992 PF00009 Elongation factor Tu GTP binding domain BDGL_001992 PF06421 GTP-binding protein LepA C-terminus BDGL_001992 PF03144 Elongation factor Tu domain 2 BDGL_001992 PF00679 Elongation factor G C-terminus BDGL_001994 PF13180 PDZ domain BDGL_001995 PF02910 Fumarate reductase flavoprotein C-term BDGL_001995 PF00890 FAD binding domain BDGL_001997 PF02223 Thymidylate kinase BDGL_001998 PF02618 YceG-like family BDGL_001999 PF01063 Amino-transferase class IV BDGL_002002 PF00528 Binding-protein-dependent transport system inner membrane component BDGL_002003 PF00528 Binding-protein-dependent transport system inner membrane component BDGL_002004 PF00005 ABC transporter BDGL_002004 PF12857 TOBE-like domain BDGL_002005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_002005 PF03466 LysR substrate binding domain BDGL_002007 PF14602 Hexapeptide repeat of succinyl-transferase BDGL_002007 PF00132 Bacterial transferase hexapeptide (six repeats) BDGL_002007 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal BDGL_002009 PF06508 Queuosine biosynthesis protein QueC BDGL_002012 PF00578 AhpC/TSA family BDGL_002015 PF00293 NUDIX domain BDGL_002015 PF01467 Cytidylyltransferase-like BDGL_002016 PF00378 Enoyl-CoA hydratase/isomerase BDGL_002017 PF01784 NIF3 (NGG1p interacting factor 3) BDGL_002018 PF07690 Major Facilitator Superfamily BDGL_002019 PF02769 AIR synthase related protein, C-terminal domain BDGL_002019 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BDGL_002019 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal BDGL_002020 PF01966 HD domain BDGL_002021 PF01330 RuvA N terminal domain BDGL_002021 PF07499 RuvA, C-terminal domain BDGL_002022 PF05496 Holliday junction DNA helicase RuvB P-loop domain BDGL_002022 PF05491 RuvB C-terminal winged helix domain BDGL_002022 PF17864 RuvB AAA lid domain BDGL_002023 PF01546 Peptidase family M20/M25/M40 BDGL_002023 PF07687 Peptidase dimerisation domain BDGL_002024 PF03061 Thioesterase superfamily BDGL_002025 PF01618 MotA/TolQ/ExbB proton channel family BDGL_002026 PF02472 Biopolymer transport protein ExbD/TolR BDGL_002029 PF04052 TolB amino-terminal domain BDGL_002029 PF07676 WD40-like Beta Propeller Repeat BDGL_002030 PF00691 OmpA family BDGL_002032 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain BDGL_002033 PF08032 RNA 2'-O ribose methyltransferase substrate binding BDGL_002033 PF00588 SpoU rRNA Methylase family BDGL_002039 PF11638 DnaA N-terminal domain BDGL_002039 PF08299 Bacterial dnaA protein helix-turn-helix BDGL_002039 PF00308 Bacterial dnaA protein BDGL_002040 PF01594 AI-2E family transporter BDGL_002041 PF02769 AIR synthase related protein, C-terminal domain BDGL_002041 PF00586 AIR synthase related protein, N-terminal domain BDGL_002042 PF00586 AIR synthase related protein, N-terminal domain BDGL_002042 PF02769 AIR synthase related protein, C-terminal domain BDGL_002043 PF00551 Formyl transferase BDGL_002044 PF12697 Alpha/beta hydrolase family BDGL_002045 PF06965 Na+/H+ antiporter 1 BDGL_002045 PF01343 Peptidase family S49 BDGL_002047 PF03772 Competence protein BDGL_002047 PF13567 Domain of unknown function (DUF4131) BDGL_002047 PF00753 Metallo-beta-lactamase superfamily BDGL_002048 PF00005 ABC transporter BDGL_002049 PF12704 MacB-like periplasmic core domain BDGL_002049 PF02687 FtsX-like permease family BDGL_002051 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BDGL_002053 PF00266 Aminotransferase class-V BDGL_002055 PF13533 Biotin-lipoyl like BDGL_002058 PF03989 DNA gyrase C-terminal domain, beta-propeller BDGL_002058 PF00521 DNA gyrase/topoisomerase IV, subunit A BDGL_002059 PF00766 Electron transfer flavoprotein FAD-binding domain BDGL_002059 PF01012 Electron transfer flavoprotein domain BDGL_002060 PF01012 Electron transfer flavoprotein domain BDGL_002060 PF00766 Electron transfer flavoprotein FAD-binding domain BDGL_002061 PF01012 Electron transfer flavoprotein domain BDGL_002062 PF02899 Phage integrase, N-terminal SAM-like domain BDGL_002062 PF00589 Phage integrase family BDGL_002063 PF01810 LysE type translocator BDGL_002064 PF00561 alpha/beta hydrolase fold BDGL_002065 PF01678 Diaminopimelate epimerase BDGL_002066 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BDGL_002066 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BDGL_002068 PF00324 Amino acid permease BDGL_002069 PF01235 Sodium:alanine symporter family BDGL_002070 PF18073 Rubredoxin metal binding domain BDGL_002072 PF00152 tRNA synthetases class II (D, K and N) BDGL_002073 PF11890 Domain of unknown function (DUF3410) BDGL_002073 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BDGL_002073 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BDGL_002074 PF06803 Protein of unknown function (DUF1232) BDGL_002075 PF02634 FdhD/NarQ family BDGL_002076 PF00384 Molybdopterin oxidoreductase BDGL_002077 PF02595 Glycerate kinase family BDGL_002079 PF00106 short chain dehydrogenase BDGL_002080 PF00881 Nitroreductase family BDGL_002081 PF00873 AcrB/AcrD/AcrF family BDGL_002082 PF00529 HlyD membrane-fusion protein of T1SS BDGL_002082 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BDGL_002085 PF00480 ROK family BDGL_002086 PF00300 Histidine phosphatase superfamily (branch 1) BDGL_002090 PF03180 NLPA lipoprotein BDGL_002091 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_002091 PF03466 LysR substrate binding domain BDGL_002094 PF03449 Transcription elongation factor, N-terminal BDGL_002094 PF01272 Transcription elongation factor, GreA/GreB, C-term BDGL_002095 PF00497 Bacterial extracellular solute-binding proteins, family 3 BDGL_002095 PF01464 Transglycosylase SLT domain BDGL_002097 PF01171 PP-loop family BDGL_002098 PF01464 Transglycosylase SLT domain BDGL_002099 PF01435 Peptidase family M48 BDGL_002101 PF00873 AcrB/AcrD/AcrF family BDGL_002102 PF03009 Glycerophosphoryl diester phosphodiesterase family BDGL_002104 PF01219 Prokaryotic diacylglycerol kinase BDGL_002105 PF00118 TCP-1/cpn60 chaperonin family BDGL_002106 PF00166 Chaperonin 10 Kd subunit BDGL_002109 PF00149 Calcineurin-like phosphoesterase BDGL_002110 PF00781 Diacylglycerol kinase catalytic domain BDGL_002111 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain BDGL_002111 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain BDGL_002112 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BDGL_002112 PF01266 FAD dependent oxidoreductase BDGL_002113 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BDGL_002113 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BDGL_002114 PF00083 Sugar (and other) transporter BDGL_002117 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BDGL_002117 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BDGL_002118 PF09423 PhoD-like phosphatase BDGL_002118 PF16655 PhoD-like phosphatase, N-terminal domain BDGL_002121 PF00809 Pterin binding enzyme BDGL_002122 PF01434 Peptidase family M41 BDGL_002122 PF00004 ATPase family associated with various cellular activities (AAA) BDGL_002122 PF06480 FtsH Extracellular BDGL_002122 PF17862 AAA+ lid domain BDGL_002123 PF01728 FtsJ-like methyltransferase BDGL_002124 PF01985 CRS1 / YhbY (CRM) domain BDGL_002128 PF00117 Glutamine amidotransferase class-I BDGL_002128 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BDGL_002129 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BDGL_002129 PF02142 MGS-like domain BDGL_002129 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BDGL_002130 PF03449 Transcription elongation factor, N-terminal BDGL_002130 PF01272 Transcription elongation factor, GreA/GreB, C-term BDGL_002131 PF00440 Bacterial regulatory proteins, tetR family BDGL_002132 PF01042 Endoribonuclease L-PSP BDGL_002133 PF00132 Bacterial transferase hexapeptide (six repeats) BDGL_002134 PF00582 Universal stress protein family BDGL_002136 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BDGL_002138 PF09587 Bacterial capsule synthesis protein PGA_cap BDGL_002141 PF00999 Sodium/hydrogen exchanger family BDGL_002142 PF04228 Putative neutral zinc metallopeptidase BDGL_002143 PF05661 Protein of unknown function (DUF808) BDGL_002144 PF00579 tRNA synthetases class I (W and Y) BDGL_002145 PF00549 CoA-ligase BDGL_002145 PF02629 CoA binding domain BDGL_002146 PF00549 CoA-ligase BDGL_002146 PF08442 ATP-grasp domain BDGL_002147 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BDGL_002147 PF07992 Pyridine nucleotide-disulphide oxidoreductase BDGL_002148 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BDGL_002148 PF00364 Biotin-requiring enzyme BDGL_002148 PF02817 e3 binding domain BDGL_002149 PF02779 Transketolase, pyrimidine binding domain BDGL_002149 PF00676 Dehydrogenase E1 component BDGL_002149 PF16078 2-oxoglutarate dehydrogenase N-terminus BDGL_002149 PF16870 2-oxoglutarate dehydrogenase C-terminal BDGL_002152 PF13085 2Fe-2S iron-sulfur cluster binding domain BDGL_002153 PF02910 Fumarate reductase flavoprotein C-term BDGL_002153 PF00890 FAD binding domain BDGL_002154 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BDGL_002155 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BDGL_002157 PF00285 Citrate synthase, C-terminal domain BDGL_002159 PF00581 Rhodanese-like domain BDGL_002159 PF17773 UPF0176 acylphosphatase like domain BDGL_002162 PF04545 Sigma-70, region 4 BDGL_002162 PF04539 Sigma-70 region 3 BDGL_002162 PF04546 Sigma-70, non-essential region BDGL_002162 PF00140 Sigma-70 factor, region 1.2 BDGL_002162 PF04542 Sigma-70 region 2 BDGL_002162 PF03979 Sigma-70 factor, region 1.1 BDGL_002163 PF04359 Protein of unknown function (DUF493) BDGL_002164 PF03099 Biotin/lipoate A/B protein ligase family BDGL_002166 PF00465 Iron-containing alcohol dehydrogenase BDGL_002167 PF13520 Amino acid permease BDGL_002168 PF03358 NADPH-dependent FMN reductase BDGL_002174 PF00588 SpoU rRNA Methylase family BDGL_002175 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BDGL_002175 PF10414 Sirohaem synthase dimerisation region BDGL_002175 PF14824 Sirohaem biosynthesis protein central BDGL_002176 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BDGL_002176 PF02403 Seryl-tRNA synthetase N-terminal domain BDGL_002178 PF03548 Outer membrane lipoprotein carrier protein LolA BDGL_002179 PF01016 Ribosomal L27 protein BDGL_002180 PF00829 Ribosomal prokaryotic L21 protein BDGL_002181 PF00348 Polyprenyl synthetase BDGL_002183 PF01569 PAP2 superfamily BDGL_002184 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BDGL_002184 PF00529 HlyD membrane-fusion protein of T1SS BDGL_002185 PF00873 AcrB/AcrD/AcrF family BDGL_002186 PF00873 AcrB/AcrD/AcrF family BDGL_002187 PF02321 Outer membrane efflux protein BDGL_002188 PF01906 Putative heavy-metal-binding BDGL_002189 PF01906 Putative heavy-metal-binding BDGL_002193 PF08264 Anticodon-binding domain of tRNA BDGL_002193 PF00133 tRNA synthetases class I (I, L, M and V) BDGL_002193 PF10458 Valyl tRNA synthetase tRNA binding arm BDGL_002198 PF03466 LysR substrate binding domain BDGL_002198 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_002199 PF00909 Ammonium Transporter Family BDGL_002202 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BDGL_002202 PF00512 His Kinase A (phospho-acceptor) domain BDGL_002202 PF08521 Two-component sensor kinase N-terminal BDGL_002203 PF00072 Response regulator receiver domain BDGL_002203 PF00486 Transcriptional regulatory protein, C terminal BDGL_002204 PF00884 Sulfatase BDGL_002204 PF08019 Phosphoethanolamine transferase EptA/EptB BDGL_002209 PF01734 Patatin-like phospholipase BDGL_002211 PF01145 SPFH domain / Band 7 family BDGL_002212 PF04237 YjbR BDGL_002213 PF00348 Polyprenyl synthetase BDGL_002214 PF04303 PrpF protein BDGL_002215 PF00324 Amino acid permease BDGL_002217 PF01965 DJ-1/PfpI family BDGL_002218 PF02801 Beta-ketoacyl synthase, C-terminal domain BDGL_002218 PF00109 Beta-ketoacyl synthase, N-terminal domain BDGL_002218 PF00550 Phosphopantetheine attachment site BDGL_002218 PF16197 Ketoacyl-synthetase C-terminal extension BDGL_002218 PF00698 Acyl transferase domain BDGL_002218 PF08990 Erythronolide synthase docking BDGL_002218 PF14765 Polyketide synthase dehydratase BDGL_002218 PF08240 Alcohol dehydrogenase GroES-like domain BDGL_002218 PF09277 Erythronolide synthase, docking BDGL_002218 PF08659 KR domain BDGL_002219 PF12833 Helix-turn-helix domain BDGL_002219 PF06719 AraC-type transcriptional regulator N-terminus BDGL_002220 PF02673 Bacitracin resistance protein BacA BDGL_002224 PF02525 Flavodoxin-like fold BDGL_002227 PF01507 Phosphoadenosine phosphosulfate reductase family BDGL_002228 PF06974 Protein of unknown function (DUF1298) BDGL_002228 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain BDGL_002230 PF10150 Ribonuclease E/G family BDGL_002230 PF00575 S1 RNA binding domain BDGL_002231 PF02545 Maf-like protein BDGL_002234 PF04085 rod shape-determining protein MreC BDGL_002237 PF02686 Glu-tRNAGln amidotransferase C subunit BDGL_002238 PF01425 Amidase BDGL_002239 PF02934 GatB/GatE catalytic domain BDGL_002239 PF02637 GatB domain BDGL_002244 PF05992 SbmA/BacA-like family BDGL_002245 PF13291 ACT domain BDGL_002245 PF00291 Pyridoxal-phosphate dependent enzyme BDGL_002246 PF01734 Patatin-like phospholipase BDGL_002247 PF01235 Sodium:alanine symporter family BDGL_002250 PF00881 Nitroreductase family BDGL_002251 PF07690 Major Facilitator Superfamily BDGL_002252 PF12805 FUSC-like inner membrane protein yccS BDGL_002254 PF00667 FAD binding domain BDGL_002254 PF00258 Flavodoxin BDGL_002254 PF00175 Oxidoreductase NAD-binding domain BDGL_002256 PF03734 L,D-transpeptidase catalytic domain BDGL_002256 PF17969 L,D-transpeptidase C-terminal domain BDGL_002257 PF04304 Protein of unknown function (DUF454) BDGL_002259 PF08085 Entericidin EcnA/B family BDGL_002260 PF07687 Peptidase dimerisation domain BDGL_002260 PF01546 Peptidase family M20/M25/M40 BDGL_002263 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BDGL_002263 PF01627 Hpt domain BDGL_002263 PF01584 CheW-like domain BDGL_002263 PF00072 Response regulator receiver domain BDGL_002264 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term BDGL_002264 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BDGL_002265 PF01584 CheW-like domain BDGL_002266 PF00072 Response regulator receiver domain BDGL_002267 PF00072 Response regulator receiver domain BDGL_002270 PF00873 AcrB/AcrD/AcrF family BDGL_002271 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BDGL_002271 PF04073 Aminoacyl-tRNA editing domain BDGL_002271 PF03129 Anticodon binding domain BDGL_002272 PF07411 Domain of unknown function (DUF1508) BDGL_002273 PF08274 PhnA Zinc-Ribbon BDGL_002273 PF03831 PhnA domain BDGL_002274 PF04343 Protein of unknown function, DUF488 BDGL_002275 PF12697 Alpha/beta hydrolase family BDGL_002276 PF00881 Nitroreductase family BDGL_002277 PF00296 Luciferase-like monooxygenase BDGL_002278 PF00857 Isochorismatase family BDGL_002279 PF01042 Endoribonuclease L-PSP BDGL_002280 PF01613 Flavin reductase like domain BDGL_002281 PF00860 Permease family BDGL_002282 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BDGL_002282 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BDGL_002285 PF01571 Aminomethyltransferase folate-binding domain BDGL_002286 PF13098 Thioredoxin-like domain BDGL_002286 PF10411 Disulfide bond isomerase protein N-terminus BDGL_002289 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BDGL_002290 PF07715 TonB-dependent Receptor Plug Domain BDGL_002290 PF00593 TonB dependent receptor BDGL_002291 PF02245 Methylpurine-DNA glycosylase (MPG) BDGL_002292 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BDGL_002292 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BDGL_002292 PF06827 Zinc finger found in FPG and IleRS BDGL_002293 PF00639 PPIC-type PPIASE domain BDGL_002293 PF09312 SurA N-terminal domain BDGL_002294 PF02264 LamB porin BDGL_002296 PF01741 Large-conductance mechanosensitive channel, MscL BDGL_002297 PF00679 Elongation factor G C-terminus BDGL_002297 PF03144 Elongation factor Tu domain 2 BDGL_002297 PF00009 Elongation factor Tu GTP binding domain BDGL_002298 PF00860 Permease family BDGL_002299 PF08468 Methyltransferase small domain N-terminal BDGL_002299 PF05175 Methyltransferase small domain BDGL_002300 PF00324 Amino acid permease BDGL_002301 PF01139 tRNA-splicing ligase RtcB BDGL_002302 PF00691 OmpA family BDGL_002302 PF13505 Outer membrane protein beta-barrel domain BDGL_002304 PF00108 Thiolase, N-terminal domain BDGL_002304 PF02803 Thiolase, C-terminal domain BDGL_002306 PF00893 Small Multidrug Resistance protein BDGL_002308 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BDGL_002308 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BDGL_002309 PF01011 PQQ enzyme repeat BDGL_002310 PF04966 Carbohydrate-selective porin, OprB family BDGL_002311 PF02515 CoA-transferase family III BDGL_002312 PF12833 Helix-turn-helix domain BDGL_002312 PF02311 AraC-like ligand binding domain BDGL_002313 PF02803 Thiolase, C-terminal domain BDGL_002313 PF00108 Thiolase, N-terminal domain BDGL_002315 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BDGL_002315 PF00378 Enoyl-CoA hydratase/isomerase BDGL_002315 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BDGL_002318 PF13673 Acetyltransferase (GNAT) domain BDGL_002320 PF03006 Haemolysin-III related BDGL_002321 PF07690 Major Facilitator Superfamily BDGL_002321 PF00083 Sugar (and other) transporter BDGL_002323 PF02810 SEC-C motif BDGL_002323 PF07517 SecA DEAD-like domain BDGL_002323 PF07516 SecA Wing and Scaffold domain BDGL_002323 PF01043 SecA preprotein cross-linking domain BDGL_002324 PF10417 C-terminal domain of 1-Cys peroxiredoxin BDGL_002324 PF00578 AhpC/TSA family BDGL_002325 PF00753 Metallo-beta-lactamase superfamily BDGL_002328 PF02875 Mur ligase family, glutamate ligase domain BDGL_002328 PF08245 Mur ligase middle domain BDGL_002329 PF01039 Carboxyl transferase domain BDGL_002330 PF00290 Tryptophan synthase alpha chain BDGL_002335 PF00291 Pyridoxal-phosphate dependent enzyme BDGL_002336 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BDGL_002337 PF00593 TonB dependent receptor BDGL_002337 PF07715 TonB-dependent Receptor Plug Domain BDGL_002338 PF01923 Cobalamin adenosyltransferase BDGL_002342 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BDGL_002344 PF00072 Response regulator receiver domain BDGL_002344 PF00486 Transcriptional regulatory protein, C terminal BDGL_002345 PF00672 HAMP domain BDGL_002345 PF00512 His Kinase A (phospho-acceptor) domain BDGL_002345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BDGL_002347 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BDGL_002347 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BDGL_002347 PF02770 Acyl-CoA dehydrogenase, middle domain BDGL_002347 PF12806 Acetyl-CoA dehydrogenase C-terminal like BDGL_002348 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BDGL_002348 PF12806 Acetyl-CoA dehydrogenase C-terminal like BDGL_002348 PF02770 Acyl-CoA dehydrogenase, middle domain BDGL_002348 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BDGL_002349 PF03466 LysR substrate binding domain BDGL_002349 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_002350 PF00043 Glutathione S-transferase, C-terminal domain BDGL_002350 PF02798 Glutathione S-transferase, N-terminal domain BDGL_002351 PF06146 Phosphate-starvation-inducible E BDGL_002355 PF00593 TonB dependent receptor BDGL_002355 PF07715 TonB-dependent Receptor Plug Domain BDGL_002357 PF02938 GAD domain BDGL_002357 PF00152 tRNA synthetases class II (D, K and N) BDGL_002357 PF01336 OB-fold nucleic acid binding domain BDGL_002358 PF17101 Stealth protein CR1, conserved region 1 BDGL_002358 PF11380 Stealth protein CR2, conserved region 2 BDGL_002358 PF17102 Stealth protein CR3, conserved region 3 BDGL_002363 PF13439 Glycosyltransferase Family 4 BDGL_002363 PF00534 Glycosyl transferases group 1 BDGL_002364 PF00535 Glycosyl transferase family 2 BDGL_002365 PF01522 Polysaccharide deacetylase BDGL_002369 PF01063 Amino-transferase class IV BDGL_002370 PF03710 Glutamate-ammonia ligase adenylyltransferase BDGL_002370 PF08335 GlnD PII-uridylyltransferase BDGL_002371 PF01627 Hpt domain BDGL_002371 PF00072 Response regulator receiver domain BDGL_002371 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BDGL_002371 PF00512 His Kinase A (phospho-acceptor) domain BDGL_002371 PF00672 HAMP domain BDGL_002371 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BDGL_002372 PF02547 Queuosine biosynthesis protein BDGL_002373 PF01702 Queuine tRNA-ribosyltransferase BDGL_002374 PF02699 Preprotein translocase subunit BDGL_002375 PF07549 SecD/SecF GG Motif BDGL_002375 PF13721 SecD export protein N-terminal TM region BDGL_002375 PF02355 Protein export membrane protein BDGL_002376 PF02355 Protein export membrane protein BDGL_002376 PF07549 SecD/SecF GG Motif BDGL_002377 PF04127 DNA / pantothenate metabolism flavoprotein BDGL_002377 PF02441 Flavoprotein BDGL_002378 PF04002 RadC-like JAB domain BDGL_002379 PF01062 Bestrophin, RFP-TM, chloride channel BDGL_002381 PF04279 Intracellular septation protein A BDGL_002382 PF03795 YCII-related domain BDGL_002384 PF05430 S-adenosyl-L-methionine-dependent methyltransferase BDGL_002384 PF01266 FAD dependent oxidoreductase BDGL_002386 PF04461 Protein of unknown function (DUF520) BDGL_002389 PF03061 Thioesterase superfamily BDGL_002390 PF00085 Thioredoxin BDGL_002391 PF00561 alpha/beta hydrolase fold BDGL_002392 PF00753 Metallo-beta-lactamase superfamily BDGL_002392 PF04273 Putative phosphatase (DUF442) BDGL_002394 PF07992 Pyridine nucleotide-disulphide oxidoreductase BDGL_002394 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BDGL_002396 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BDGL_002397 PF07859 alpha/beta hydrolase fold BDGL_002401 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_002401 PF03466 LysR substrate binding domain BDGL_002402 PF01025 GrpE BDGL_002403 PF00012 Hsp70 protein BDGL_002409 PF13406 Transglycosylase SLT domain BDGL_002410 PF02222 ATP-grasp domain BDGL_002410 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BDGL_002411 PF00731 AIR carboxylase BDGL_002413 PF08245 Mur ligase middle domain BDGL_002413 PF01225 Mur ligase family, catalytic domain BDGL_002413 PF02875 Mur ligase family, glutamate ligase domain BDGL_002415 PF01569 PAP2 superfamily BDGL_002416 PF03741 Integral membrane protein TerC family BDGL_002418 PF03738 Glutathionylspermidine synthase preATP-grasp BDGL_002419 PF00355 Rieske [2Fe-2S] domain BDGL_002420 PF01979 Amidohydrolase family BDGL_002421 PF00156 Phosphoribosyl transferase domain BDGL_002423 PF13098 Thioredoxin-like domain BDGL_002423 PF10411 Disulfide bond isomerase protein N-terminus BDGL_002424 PF01545 Cation efflux family BDGL_002424 PF16916 Dimerisation domain of Zinc Transporter BDGL_002425 PF02583 Metal-sensitive transcriptional repressor BDGL_002426 PF10396 GTP-binding protein TrmE N-terminus BDGL_002426 PF01926 50S ribosome-binding GTPase BDGL_002426 PF12631 MnmE helical domain BDGL_002427 PF14849 YidC periplasmic domain BDGL_002427 PF02096 60Kd inner membrane protein BDGL_002428 PF00825 Ribonuclease P BDGL_002429 PF00468 Ribosomal protein L34 BDGL_002430 PF11638 DnaA N-terminal domain BDGL_002430 PF08299 Bacterial dnaA protein helix-turn-helix BDGL_002430 PF00308 Bacterial dnaA protein BDGL_002431 PF02768 DNA polymerase III beta subunit, C-terminal domain BDGL_002431 PF00712 DNA polymerase III beta subunit, N-terminal domain BDGL_002431 PF02767 DNA polymerase III beta subunit, central domain BDGL_002432 PF02768 DNA polymerase III beta subunit, C-terminal domain BDGL_002432 PF02767 DNA polymerase III beta subunit, central domain BDGL_002432 PF00712 DNA polymerase III beta subunit, N-terminal domain BDGL_002433 PF02463 RecF/RecN/SMC N terminal domain BDGL_002434 PF00986 DNA gyrase B subunit, carboxyl terminus BDGL_002434 PF01751 Toprim domain BDGL_002434 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BDGL_002434 PF18053 DNA gyrase B subunit insert domain BDGL_002434 PF00204 DNA gyrase B BDGL_002437 PF00005 ABC transporter BDGL_002437 PF12848 ABC transporter BDGL_002442 PF01521 Iron-sulphur cluster biosynthesis BDGL_002443 PF00561 alpha/beta hydrolase fold BDGL_002444 PF03702 Anhydro-N-acetylmuramic acid kinase BDGL_002445 PF00579 tRNA synthetases class I (W and Y) BDGL_002446 PF13689 YfiR/HmsC-like BDGL_002447 PF17152 Periplasmic sensor domain BDGL_002447 PF00990 Diguanylate cyclase, GGDEF domain BDGL_002448 PF01389 OmpA-like transmembrane domain BDGL_002448 PF00691 OmpA family BDGL_002449 PF00149 Calcineurin-like phosphoesterase BDGL_002449 PF10518 TAT (twin-arginine translocation) pathway signal sequence BDGL_002450 PF13091 PLD-like domain BDGL_002452 PF16360 GTP-binding GTPase Middle Region BDGL_002452 PF13167 GTP-binding GTPase N-terminal BDGL_002452 PF01926 50S ribosome-binding GTPase BDGL_002456 PF00149 Calcineurin-like phosphoesterase BDGL_002457 PF00398 Ribosomal RNA adenine dimethylase BDGL_002458 PF00398 Ribosomal RNA adenine dimethylase BDGL_002459 PF04166 Pyridoxal phosphate biosynthetic protein PdxA BDGL_002460 PF00572 Ribosomal protein L13 BDGL_002461 PF00380 Ribosomal protein S9/S16 BDGL_002462 PF13417 Glutathione S-transferase, N-terminal domain BDGL_002462 PF00043 Glutathione S-transferase, C-terminal domain BDGL_002463 PF04386 Stringent starvation protein B BDGL_002469 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BDGL_002469 PF00364 Biotin-requiring enzyme BDGL_002469 PF00289 Biotin carboxylase, N-terminal domain BDGL_002469 PF02785 Biotin carboxylase C-terminal domain BDGL_002471 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BDGL_002471 PF02770 Acyl-CoA dehydrogenase, middle domain BDGL_002471 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BDGL_002472 PF01039 Carboxyl transferase domain BDGL_002475 PF17932 Tetracyclin repressor-like, C-terminal domain BDGL_002475 PF00440 Bacterial regulatory proteins, tetR family BDGL_002476 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BDGL_002476 PF02770 Acyl-CoA dehydrogenase, middle domain BDGL_002476 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BDGL_002480 PF01066 CDP-alcohol phosphatidyltransferase BDGL_002481 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ BDGL_002485 PF00056 lactate/malate dehydrogenase, NAD binding domain BDGL_002485 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BDGL_002487 PF01464 Transglycosylase SLT domain BDGL_002487 PF10145 Phage-related minor tail protein BDGL_002487 PF01551 Peptidase family M23 BDGL_002488 PF01938 TRAM domain BDGL_002488 PF00919 Uncharacterized protein family UPF0004 BDGL_002488 PF04055 Radical SAM superfamily BDGL_002489 PF02562 PhoH-like protein BDGL_002490 PF02130 Uncharacterized protein family UPF0054 BDGL_002495 PF03358 NADPH-dependent FMN reductase BDGL_002496 PF03631 Virulence factor BrkB BDGL_002497 PF03631 Virulence factor BrkB BDGL_002498 PF01557 Fumarylacetoacetate (FAA) hydrolase family BDGL_002504 PF08206 Ribonuclease B OB domain BDGL_002504 PF00773 RNB domain BDGL_002504 PF17876 Cold shock domain BDGL_002504 PF00575 S1 RNA binding domain BDGL_002504 PF08461 Ribonuclease R winged-helix domain BDGL_002505 PF01432 Peptidase family M3 BDGL_002506 PF09526 Probable metal-binding protein (DUF2387) BDGL_002512 PF03937 Flavinator of succinate dehydrogenase BDGL_002513 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BDGL_002513 PF02770 Acyl-CoA dehydrogenase, middle domain BDGL_002513 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BDGL_002514 PF00743 Flavin-binding monooxygenase-like BDGL_002515 PF01196 Ribosomal protein L17 BDGL_002516 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BDGL_002516 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BDGL_002516 PF01000 RNA polymerase Rpb3/RpoA insert domain BDGL_002517 PF01479 S4 domain BDGL_002517 PF00163 Ribosomal protein S4/S9 N-terminal domain BDGL_002518 PF00411 Ribosomal protein S11 BDGL_002519 PF00416 Ribosomal protein S13/S18 BDGL_002520 PF00444 Ribosomal protein L36 BDGL_002521 PF00344 SecY translocase BDGL_002522 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BDGL_002523 PF00327 Ribosomal protein L30p/L7e BDGL_002524 PF00333 Ribosomal protein S5, N-terminal domain BDGL_002524 PF03719 Ribosomal protein S5, C-terminal domain BDGL_002525 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BDGL_002526 PF00347 Ribosomal protein L6 BDGL_002527 PF00410 Ribosomal protein S8 BDGL_002528 PF00253 Ribosomal protein S14p/S29e BDGL_002529 PF00281 Ribosomal protein L5 BDGL_002529 PF00673 ribosomal L5P family C-terminus BDGL_002530 PF00467 KOW motif BDGL_002530 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BDGL_002531 PF00238 Ribosomal protein L14p/L23e BDGL_002532 PF00366 Ribosomal protein S17 BDGL_002533 PF00831 Ribosomal L29 protein BDGL_002534 PF00252 Ribosomal protein L16p/L10e BDGL_002535 PF00189 Ribosomal protein S3, C-terminal domain BDGL_002535 PF07650 KH domain BDGL_002536 PF00237 Ribosomal protein L22p/L17e BDGL_002537 PF00203 Ribosomal protein S19 BDGL_002538 PF00181 Ribosomal Proteins L2, RNA binding domain BDGL_002538 PF03947 Ribosomal Proteins L2, C-terminal domain BDGL_002539 PF00276 Ribosomal protein L23 BDGL_002540 PF00573 Ribosomal protein L4/L1 family BDGL_002541 PF00297 Ribosomal protein L3 BDGL_002542 PF00338 Ribosomal protein S10p/S20e BDGL_002543 PF00117 Glutamine amidotransferase class-I BDGL_002544 PF01053 Cys/Met metabolism PLP-dependent enzyme BDGL_002545 PF05872 Bacterial protein of unknown function (DUF853) BDGL_002547 PF00175 Oxidoreductase NAD-binding domain BDGL_002547 PF00970 Oxidoreductase FAD-binding domain BDGL_002547 PF00042 Globin BDGL_002548 PF02082 Transcriptional regulator BDGL_002549 PF01926 50S ribosome-binding GTPase BDGL_002551 PF00375 Sodium:dicarboxylate symporter family BDGL_002553 PF01553 Acyltransferase BDGL_002556 PF17191 RecG wedge domain BDGL_002556 PF00270 DEAD/DEAH box helicase BDGL_002556 PF00271 Helicase conserved C-terminal domain BDGL_002557 PF00156 Phosphoribosyl transferase domain BDGL_002558 PF00293 NUDIX domain BDGL_002559 PF03641 Possible lysine decarboxylase BDGL_002560 PF01544 CorA-like Mg2+ transporter protein BDGL_002562 PF05494 MlaC protein BDGL_002564 PF02405 Permease MlaE BDGL_002565 PF00005 ABC transporter BDGL_002567 PF03880 DbpA RNA binding domain BDGL_002567 PF12343 Cold shock protein DEAD box A BDGL_002567 PF00271 Helicase conserved C-terminal domain BDGL_002567 PF00270 DEAD/DEAH box helicase BDGL_002568 PF00459 Inositol monophosphatase family BDGL_002569 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BDGL_002569 PF02779 Transketolase, pyrimidine binding domain BDGL_002569 PF02780 Transketolase, C-terminal domain BDGL_002570 PF00925 GTP cyclohydrolase II BDGL_002571 PF01218 Coproporphyrinogen III oxidase BDGL_002572 PF01488 Shikimate / quinate 5-dehydrogenase BDGL_002572 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BDGL_002572 PF08501 Shikimate dehydrogenase substrate binding domain BDGL_002574 PF12806 Acetyl-CoA dehydrogenase C-terminal like BDGL_002574 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BDGL_002574 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BDGL_002574 PF02770 Acyl-CoA dehydrogenase, middle domain BDGL_002576 PF04024 PspC domain BDGL_002577 PF00571 CBS domain BDGL_002577 PF01743 Poly A polymerase head domain BDGL_002582 PF02091 Glycyl-tRNA synthetase alpha subunit BDGL_002583 PF05746 DALR anticodon binding domain BDGL_002583 PF02092 Glycyl-tRNA synthetase beta subunit BDGL_002584 PF00892 EamA-like transporter family BDGL_002585 PF03466 LysR substrate binding domain BDGL_002585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_002586 PF01177 Asp/Glu/Hydantoin racemase BDGL_002587 PF03466 LysR substrate binding domain BDGL_002587 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_002590 PF00082 Subtilase family BDGL_002590 PF05922 Peptidase inhibitor I9 BDGL_002593 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family BDGL_002594 PF04996 Succinylarginine dihydrolase BDGL_002595 PF00171 Aldehyde dehydrogenase family BDGL_002596 PF04958 Arginine N-succinyltransferase beta subunit BDGL_002597 PF00202 Aminotransferase class-III BDGL_002598 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BDGL_002598 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BDGL_002599 PF00324 Amino acid permease BDGL_002601 PF08241 Methyltransferase domain BDGL_002605 PF13614 AAA domain BDGL_002606 PF01594 AI-2E family transporter BDGL_002607 PF00080 Copper/zinc superoxide dismutase (SODC) BDGL_002608 PF12805 FUSC-like inner membrane protein yccS BDGL_002609 PF07690 Major Facilitator Superfamily BDGL_002611 PF02525 Flavodoxin-like fold BDGL_002612 PF03992 Antibiotic biosynthesis monooxygenase BDGL_002616 PF01565 FAD binding domain BDGL_002616 PF02913 FAD linked oxidases, C-terminal domain BDGL_002617 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BDGL_002617 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BDGL_002618 PF00892 EamA-like transporter family BDGL_002619 PF00892 EamA-like transporter family BDGL_002621 PF01925 Sulfite exporter TauE/SafE BDGL_002622 PF09157 Pseudouridine synthase II TruB, C-terminal BDGL_002622 PF16198 tRNA pseudouridylate synthase B C-terminal domain BDGL_002622 PF01509 TruB family pseudouridylate synthase (N terminal domain) BDGL_002623 PF03280 Proteobacterial lipase chaperone protein BDGL_002624 PF00561 alpha/beta hydrolase fold BDGL_002625 PF01245 Ribosomal protein L19 BDGL_002626 PF01746 tRNA (Guanine-1)-methyltransferase BDGL_002627 PF01782 RimM N-terminal domain BDGL_002627 PF05239 PRC-barrel domain BDGL_002628 PF00886 Ribosomal protein S16 BDGL_002636 PF02401 LytB protein BDGL_002637 PF00625 Guanylate kinase BDGL_002638 PF01192 RNA polymerase Rpb6 BDGL_002640 PF13291 ACT domain BDGL_002640 PF02824 TGS domain BDGL_002640 PF04607 Region found in RelA / SpoT proteins BDGL_002641 PF01042 Endoribonuclease L-PSP BDGL_002643 PF04324 BFD-like [2Fe-2S] binding domain BDGL_002644 PF00210 Ferritin-like domain BDGL_002645 PF11846 Virulence factor membrane-bound polymerase, C-terminal BDGL_002645 PF04932 O-Antigen ligase BDGL_002645 PF15864 Protein glycosylation ligase BDGL_002647 PF07963 Prokaryotic N-terminal methylation motif BDGL_002647 PF00114 Pilin (bacterial filament) BDGL_002649 PF04536 TPM domain BDGL_002650 PF04011 LemA family BDGL_002652 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BDGL_002652 PF07992 Pyridine nucleotide-disulphide oxidoreductase BDGL_002653 PF01645 Conserved region in glutamate synthase BDGL_002653 PF01493 GXGXG motif BDGL_002653 PF04898 Glutamate synthase central domain BDGL_002653 PF00310 Glutamine amidotransferases class-II BDGL_002655 PF01761 3-dehydroquinate synthase BDGL_002656 PF01202 Shikimate kinase BDGL_002657 PF00263 Bacterial type II and III secretion system protein BDGL_002657 PF07660 Secretin and TonB N terminus short domain BDGL_002657 PF03958 Bacterial type II/III secretion system short domain BDGL_002657 PF11741 AMIN domain BDGL_002659 PF04350 Pilus assembly protein, PilO BDGL_002660 PF05137 Fimbrial assembly protein (PilN) BDGL_002661 PF11104 Type IV pilus assembly protein PilM; BDGL_002662 PF17092 Penicillin-binding protein OB-like domain BDGL_002662 PF00905 Penicillin binding protein transpeptidase domain BDGL_002662 PF00912 Transglycosylase BDGL_002663 PF13847 Methyltransferase domain BDGL_002665 PF00953 Glycosyl transferase family 4 BDGL_002666 PF08245 Mur ligase middle domain BDGL_002666 PF01225 Mur ligase family, catalytic domain BDGL_002666 PF02875 Mur ligase family, glutamate ligase domain BDGL_002667 PF01225 Mur ligase family, catalytic domain BDGL_002667 PF08245 Mur ligase middle domain BDGL_002667 PF02875 Mur ligase family, glutamate ligase domain BDGL_002668 PF03717 Penicillin-binding Protein dimerisation domain BDGL_002668 PF00905 Penicillin binding protein transpeptidase domain BDGL_002670 PF01795 MraW methylase family BDGL_002673 PF00749 tRNA synthetases class I (E and Q), catalytic domain BDGL_002674 PF00324 Amino acid permease BDGL_002678 PF01545 Cation efflux family BDGL_002679 PF00873 AcrB/AcrD/AcrF family BDGL_002680 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BDGL_002680 PF00529 HlyD membrane-fusion protein of T1SS BDGL_002684 PF04191 Phospholipid methyltransferase BDGL_002688 PF00005 ABC transporter BDGL_002688 PF12848 ABC transporter BDGL_002689 PF01053 Cys/Met metabolism PLP-dependent enzyme BDGL_002690 PF00106 short chain dehydrogenase BDGL_002691 PF01740 STAS domain BDGL_002691 PF00916 Sulfate permease family BDGL_002692 PF09371 Tex-like protein N-terminal domain BDGL_002692 PF00575 S1 RNA binding domain BDGL_002692 PF16921 Tex protein YqgF-like domain BDGL_002692 PF17674 HHH domain BDGL_002693 PF00486 Transcriptional regulatory protein, C terminal BDGL_002693 PF00072 Response regulator receiver domain BDGL_002694 PF00512 His Kinase A (phospho-acceptor) domain BDGL_002694 PF00672 HAMP domain BDGL_002694 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BDGL_002696 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain BDGL_002696 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain BDGL_002697 PF00583 Acetyltransferase (GNAT) family BDGL_002699 PF00475 Imidazoleglycerol-phosphate dehydratase BDGL_002700 PF00117 Glutamine amidotransferase class-I BDGL_002702 PF00570 HRDC domain BDGL_002702 PF01612 3'-5' exonuclease BDGL_002703 PF00977 Histidine biosynthesis protein BDGL_002704 PF00005 ABC transporter BDGL_002704 PF00664 ABC transporter transmembrane region BDGL_002709 PF01636 Phosphotransferase enzyme family BDGL_002710 PF00977 Histidine biosynthesis protein BDGL_002713 PF00230 Major intrinsic protein BDGL_002719 PF02705 K+ potassium transporter BDGL_002722 PF02525 Flavodoxin-like fold BDGL_002723 PF01638 HxlR-like helix-turn-helix BDGL_002726 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BDGL_002727 PF00440 Bacterial regulatory proteins, tetR family BDGL_002728 PF02311 AraC-like ligand binding domain BDGL_002728 PF12833 Helix-turn-helix domain BDGL_002729 PF00248 Aldo/keto reductase family BDGL_002733 PF03466 LysR substrate binding domain BDGL_002733 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_002734 PF07690 Major Facilitator Superfamily BDGL_002739 PF01593 Flavin containing amine oxidoreductase BDGL_002740 PF05726 Pirin C-terminal cupin domain BDGL_002740 PF02678 Pirin BDGL_002741 PF00857 Isochorismatase family BDGL_002742 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_002743 PF00171 Aldehyde dehydrogenase family BDGL_002744 PF00202 Aminotransferase class-III BDGL_002745 PF00155 Aminotransferase class I and II BDGL_002745 PF00392 Bacterial regulatory proteins, gntR family BDGL_002746 PF00324 Amino acid permease BDGL_002747 PF00324 Amino acid permease BDGL_002749 PF03591 AzlC protein BDGL_002751 PF00436 Single-strand binding protein family BDGL_002752 PF07690 Major Facilitator Superfamily BDGL_002754 PF08543 Phosphomethylpyrimidine kinase BDGL_002754 PF03070 TENA/THI-4/PQQC family BDGL_002754 PF02581 Thiamine monophosphate synthase BDGL_002755 PF09278 MerR, DNA binding BDGL_002755 PF00376 MerR family regulatory protein BDGL_002756 PF00106 short chain dehydrogenase BDGL_002757 PF06942 GlpM protein BDGL_002759 PF08240 Alcohol dehydrogenase GroES-like domain BDGL_002759 PF00107 Zinc-binding dehydrogenase BDGL_002760 PF16925 Tetracyclin repressor-like, C-terminal domain BDGL_002760 PF00440 Bacterial regulatory proteins, tetR family BDGL_002761 PF17755 UvrA DNA-binding domain BDGL_002761 PF17760 UvrA interaction domain BDGL_002762 PF00990 Diguanylate cyclase, GGDEF domain BDGL_002764 PF02028 BCCT, betaine/carnitine/choline family transporter BDGL_002766 PF00474 Sodium:solute symporter family BDGL_002767 PF04341 Protein of unknown function, DUF485 BDGL_002768 PF00672 HAMP domain BDGL_002768 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BDGL_002768 PF00512 His Kinase A (phospho-acceptor) domain BDGL_002768 PF01627 Hpt domain BDGL_002768 PF00072 Response regulator receiver domain BDGL_002770 PF00196 Bacterial regulatory proteins, luxR family BDGL_002770 PF00072 Response regulator receiver domain BDGL_002771 PF03358 NADPH-dependent FMN reductase BDGL_002772 PF00296 Luciferase-like monooxygenase BDGL_002773 PF01037 Lrp/AsnC ligand binding domain BDGL_002774 PF00857 Isochorismatase family BDGL_002775 PF13193 AMP-binding enzyme C-terminal domain BDGL_002775 PF00501 AMP-binding enzyme BDGL_002775 PF16177 Acetyl-coenzyme A synthetase N-terminus BDGL_002776 PF00501 AMP-binding enzyme BDGL_002776 PF16177 Acetyl-coenzyme A synthetase N-terminus BDGL_002776 PF13193 AMP-binding enzyme C-terminal domain BDGL_002778 PF05552 Conserved TM helix BDGL_002778 PF00924 Mechanosensitive ion channel BDGL_002779 PF04452 RNA methyltransferase BDGL_002780 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) BDGL_002780 PF00534 Glycosyl transferases group 1 BDGL_002781 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BDGL_002783 PF03462 PCRF domain BDGL_002783 PF00472 RF-1 domain BDGL_002785 PF17768 RecJ OB domain BDGL_002785 PF02272 DHHA1 domain BDGL_002785 PF01368 DHH family BDGL_002786 PF01243 Pyridoxamine 5'-phosphate oxidase BDGL_002786 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region BDGL_002787 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BDGL_002787 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BDGL_002787 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BDGL_002787 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BDGL_002788 PF00571 CBS domain BDGL_002788 PF00478 IMP dehydrogenase / GMP reductase domain BDGL_002789 PF01613 Flavin reductase like domain BDGL_002789 PF00258 Flavodoxin BDGL_002790 PF00593 TonB dependent receptor BDGL_002790 PF07715 TonB-dependent Receptor Plug Domain BDGL_002791 PF01169 Uncharacterized protein family UPF0016 BDGL_002793 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BDGL_002793 PF00364 Biotin-requiring enzyme BDGL_002793 PF02817 e3 binding domain BDGL_002794 PF17831 Pyruvate dehydrogenase E1 component middle domain BDGL_002794 PF00456 Transketolase, thiamine diphosphate binding domain BDGL_002795 PF01551 Peptidase family M23 BDGL_002797 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase BDGL_002798 PF00091 Tubulin/FtsZ family, GTPase domain BDGL_002798 PF12327 FtsZ family, C-terminal domain BDGL_002799 PF02491 SHS2 domain inserted in FTSA BDGL_002800 PF08478 POTRA domain, FtsQ-type BDGL_002800 PF03799 Cell division protein FtsQ BDGL_002801 PF07478 D-ala D-ala ligase C-terminus BDGL_002801 PF01820 D-ala D-ala ligase N-terminus BDGL_002802 PF08245 Mur ligase middle domain BDGL_002802 PF02875 Mur ligase family, glutamate ligase domain BDGL_002802 PF01225 Mur ligase family, catalytic domain BDGL_002803 PF04101 Glycosyltransferase family 28 C-terminal domain BDGL_002803 PF03033 Glycosyltransferase family 28 N-terminal domain BDGL_002804 PF02951 Prokaryotic glutathione synthetase, N-terminal domain BDGL_002804 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain BDGL_002806 PF07715 TonB-dependent Receptor Plug Domain BDGL_002806 PF00593 TonB dependent receptor BDGL_002809 PF00156 Phosphoribosyl transferase domain BDGL_002810 PF03372 Endonuclease/Exonuclease/phosphatase family BDGL_002811 PF03960 ArsC family BDGL_002813 PF07859 alpha/beta hydrolase fold BDGL_002814 PF00990 Diguanylate cyclase, GGDEF domain BDGL_002814 PF07694 5TMR of 5TMR-LYT BDGL_002815 PF11412 Disulphide bond corrector protein DsbC BDGL_002815 PF02683 Cytochrome C biogenesis protein transmembrane region BDGL_002821 PF00576 HIUase/Transthyretin family BDGL_002822 PF00860 Permease family BDGL_002824 PF01494 FAD binding domain BDGL_002825 PF03561 Allantoicase repeat BDGL_002826 PF04115 Ureidoglycolate lyase BDGL_002827 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BDGL_002827 PF00986 DNA gyrase B subunit, carboxyl terminus BDGL_002827 PF01751 Toprim domain BDGL_002827 PF00204 DNA gyrase B BDGL_002828 PF05728 Uncharacterised protein family (UPF0227) BDGL_002835 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) BDGL_002835 PF04717 Type VI secretion system, phage-baseplate injector BDGL_002835 PF13296 Putative type VI secretion system Rhs element Vgr BDGL_002836 PF02600 Disulfide bond formation protein DsbB BDGL_002837 PF04262 Glutamate-cysteine ligase BDGL_002840 PF04286 Protein of unknown function (DUF445) BDGL_002841 PF00155 Aminotransferase class I and II BDGL_002842 PF01554 MatE BDGL_002843 PF00106 short chain dehydrogenase BDGL_002845 PF00486 Transcriptional regulatory protein, C terminal BDGL_002845 PF00072 Response regulator receiver domain BDGL_002846 PF00512 His Kinase A (phospho-acceptor) domain BDGL_002846 PF00989 PAS fold BDGL_002846 PF11808 Phosphate regulon sensor protein PhoR BDGL_002846 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BDGL_002848 PF01547 Bacterial extracellular solute-binding protein BDGL_002850 PF03069 Acetamidase/Formamidase family BDGL_002851 PF02666 Phosphatidylserine decarboxylase BDGL_002852 PF00581 Rhodanese-like domain BDGL_002853 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BDGL_002853 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BDGL_002854 PF02580 D-Tyr-tRNA(Tyr) deacylase BDGL_002859 PF00925 GTP cyclohydrolase II BDGL_002859 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BDGL_002860 PF00885 6,7-dimethyl-8-ribityllumazine synthase BDGL_002861 PF01029 NusB family BDGL_002862 PF00586 AIR synthase related protein, N-terminal domain BDGL_002862 PF02769 AIR synthase related protein, C-terminal domain BDGL_002863 PF04608 Phosphatidylglycerophosphatase A BDGL_002864 PF00132 Bacterial transferase hexapeptide (six repeats) BDGL_002864 PF14602 Hexapeptide repeat of succinyl-transferase BDGL_002864 PF12804 MobA-like NTP transferase domain BDGL_002865 PF01380 SIS domain BDGL_002867 PF01810 LysE type translocator BDGL_002868 PF01177 Asp/Glu/Hydantoin racemase BDGL_002869 PF13419 Haloacid dehalogenase-like hydrolase BDGL_002871 PF00491 Arginase family BDGL_002872 PF01979 Amidohydrolase family BDGL_002873 PF00324 Amino acid permease BDGL_002874 PF00221 Aromatic amino acid lyase BDGL_002875 PF17391 Urocanase N-terminal domain BDGL_002875 PF01175 Urocanase Rossmann-like domain BDGL_002875 PF17392 Urocanase C-terminal domain BDGL_002876 PF05962 HutD BDGL_002877 PF07702 UTRA domain BDGL_002877 PF00392 Bacterial regulatory proteins, gntR family BDGL_002879 PF07683 Cobalamin synthesis protein cobW C-terminal domain BDGL_002879 PF02492 CobW/HypB/UreG, nucleotide-binding domain BDGL_002881 PF00324 Amino acid permease BDGL_002883 PF02798 Glutathione S-transferase, N-terminal domain BDGL_002883 PF14497 Glutathione S-transferase, C-terminal domain BDGL_002884 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BDGL_002886 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BDGL_002887 PF04463 Protein of unknown function (DUF523) BDGL_002888 PF01554 MatE BDGL_002889 PF01758 Sodium Bile acid symporter family BDGL_002890 PF00857 Isochorismatase family BDGL_002891 PF00701 Dihydrodipicolinate synthetase family BDGL_002893 PF01259 SAICAR synthetase BDGL_002895 PF01226 Formate/nitrite transporter BDGL_002896 PF00004 ATPase family associated with various cellular activities (AAA) BDGL_002896 PF16193 AAA C-terminal domain BDGL_002896 PF12002 MgsA AAA+ ATPase C terminal BDGL_002897 PF07995 Glucose / Sorbosone dehydrogenase BDGL_002898 PF03692 Putative zinc- or iron-chelating domain BDGL_002899 PF07043 Protein of unknown function (DUF1328) BDGL_002902 PF10576 Iron-sulfur binding domain of endonuclease III BDGL_002902 PF00633 Helix-hairpin-helix motif BDGL_002902 PF14815 NUDIX domain BDGL_002902 PF00730 HhH-GPD superfamily base excision DNA repair protein BDGL_002905 PF03352 Methyladenine glycosylase BDGL_002906 PF00107 Zinc-binding dehydrogenase BDGL_002906 PF08240 Alcohol dehydrogenase GroES-like domain BDGL_002907 PF00392 Bacterial regulatory proteins, gntR family BDGL_002907 PF00155 Aminotransferase class I and II BDGL_002910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_002910 PF03466 LysR substrate binding domain BDGL_002911 PF00248 Aldo/keto reductase family BDGL_002912 PF00248 Aldo/keto reductase family BDGL_002913 PF07690 Major Facilitator Superfamily BDGL_002915 PF01113 Dihydrodipicolinate reductase, N-terminus BDGL_002915 PF05173 Dihydrodipicolinate reductase, C-terminus BDGL_002917 PF01556 DnaJ C terminal domain BDGL_002917 PF00684 DnaJ central domain BDGL_002917 PF00226 DnaJ domain BDGL_002919 PF00873 AcrB/AcrD/AcrF family BDGL_002920 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BDGL_002921 PF08361 MAATS-type transcriptional repressor, C-terminal region BDGL_002921 PF00440 Bacterial regulatory proteins, tetR family BDGL_002922 PF00311 Phosphoenolpyruvate carboxylase BDGL_002923 PF00860 Permease family BDGL_002924 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_002924 PF03466 LysR substrate binding domain BDGL_002927 PF00920 Dehydratase family BDGL_002928 PF00551 Formyl transferase BDGL_002928 PF02911 Formyl transferase, C-terminal domain BDGL_002929 PF01029 NusB family BDGL_002929 PF01189 16S rRNA methyltransferase RsmB/F BDGL_002931 PF00209 Sodium:neurotransmitter symporter family BDGL_002933 PF02798 Glutathione S-transferase, N-terminal domain BDGL_002936 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BDGL_002937 PF01252 Signal peptidase (SPase) II BDGL_002938 PF00133 tRNA synthetases class I (I, L, M and V) BDGL_002938 PF06827 Zinc finger found in FPG and IleRS BDGL_002938 PF08264 Anticodon-binding domain of tRNA BDGL_002939 PF06574 FAD synthetase BDGL_002939 PF01687 Riboflavin kinase BDGL_002941 PF01048 Phosphorylase superfamily BDGL_002942 PF08362 YcdC-like protein, C-terminal region BDGL_002942 PF00440 Bacterial regulatory proteins, tetR family BDGL_002943 PF00005 ABC transporter BDGL_002944 PF00528 Binding-protein-dependent transport system inner membrane component BDGL_002945 PF00296 Luciferase-like monooxygenase BDGL_002946 PF09084 NMT1/THI5 like BDGL_002947 PF09084 NMT1/THI5 like BDGL_002948 PF00696 Amino acid kinase family BDGL_002948 PF00583 Acetyltransferase (GNAT) family BDGL_002951 PF00106 short chain dehydrogenase BDGL_002952 PF13419 Haloacid dehalogenase-like hydrolase BDGL_002954 PF01323 DSBA-like thioredoxin domain BDGL_002955 PF00440 Bacterial regulatory proteins, tetR family BDGL_002955 PF08360 QacR-like protein, C-terminal region BDGL_002956 PF00440 Bacterial regulatory proteins, tetR family BDGL_002957 PF00175 Oxidoreductase NAD-binding domain BDGL_002958 PF00487 Fatty acid desaturase BDGL_002959 PF01138 3' exoribonuclease family, domain 1 BDGL_002959 PF03725 3' exoribonuclease family, domain 2 BDGL_002961 PF04185 Phosphoesterase family BDGL_002961 PF05506 Domain of unknown function (DUF756) BDGL_002963 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BDGL_002963 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BDGL_002964 PF01510 N-acetylmuramoyl-L-alanine amidase BDGL_002965 PF03023 Lipid II flippase MurJ BDGL_002966 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BDGL_002966 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BDGL_002967 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BDGL_002967 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BDGL_002968 PF02706 Chain length determinant protein BDGL_002968 PF13807 G-rich domain on putative tyrosine kinase BDGL_002968 PF13614 AAA domain BDGL_002969 PF01451 Low molecular weight phosphotyrosine protein phosphatase BDGL_002970 PF02563 Polysaccharide biosynthesis/export protein BDGL_002970 PF18412 Outer-membrane lipoprotein Wza C-terminal domain BDGL_002970 PF10531 SLBB domain BDGL_002971 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BDGL_002971 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BDGL_002971 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BDGL_002972 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BDGL_002972 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BDGL_002973 PF00132 Bacterial transferase hexapeptide (six repeats) BDGL_002974 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BDGL_002976 PF13439 Glycosyltransferase Family 4 BDGL_002976 PF00534 Glycosyl transferases group 1 BDGL_002979 PF02350 UDP-N-acetylglucosamine 2-epimerase BDGL_002982 PF00535 Glycosyl transferase family 2 BDGL_002983 PF02397 Bacterial sugar transferase BDGL_002984 PF00483 Nucleotidyl transferase BDGL_002985 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BDGL_002985 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BDGL_002985 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BDGL_002986 PF00342 Phosphoglucose isomerase BDGL_002987 PF16363 GDP-mannose 4,6 dehydratase BDGL_002988 PF01757 Acyltransferase family BDGL_002990 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BDGL_002990 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BDGL_002990 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BDGL_002990 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BDGL_002991 PF02652 L-lactate permease BDGL_002992 PF07729 FCD domain BDGL_002992 PF00392 Bacterial regulatory proteins, gntR family BDGL_002993 PF01070 FMN-dependent dehydrogenase BDGL_002994 PF01565 FAD binding domain BDGL_002994 PF09330 D-lactate dehydrogenase, membrane binding BDGL_002995 PF00155 Aminotransferase class I and II BDGL_002997 PF07729 FCD domain BDGL_002997 PF00392 Bacterial regulatory proteins, gntR family BDGL_002999 PF00285 Citrate synthase, C-terminal domain BDGL_003000 PF00694 Aconitase C-terminal domain BDGL_003000 PF00330 Aconitase family (aconitate hydratase) BDGL_003005 PF04717 Type VI secretion system, phage-baseplate injector BDGL_003007 PF13296 Putative type VI secretion system Rhs element Vgr BDGL_003007 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) BDGL_003007 PF04717 Type VI secretion system, phage-baseplate injector BDGL_003016 PF00849 RNA pseudouridylate synthase BDGL_003019 PF07715 TonB-dependent Receptor Plug Domain BDGL_003019 PF00593 TonB dependent receptor BDGL_003021 PF01037 Lrp/AsnC ligand binding domain BDGL_003022 PF01266 FAD dependent oxidoreductase BDGL_003023 PF00842 Alanine racemase, C-terminal domain BDGL_003023 PF01168 Alanine racemase, N-terminal domain BDGL_003024 PF01042 Endoribonuclease L-PSP BDGL_003025 PF00324 Amino acid permease BDGL_003026 PF00324 Amino acid permease BDGL_003028 PF00171 Aldehyde dehydrogenase family BDGL_003029 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BDGL_003029 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BDGL_003030 PF00501 AMP-binding enzyme BDGL_003030 PF16177 Acetyl-coenzyme A synthetase N-terminus BDGL_003030 PF13193 AMP-binding enzyme C-terminal domain BDGL_003031 PF00501 AMP-binding enzyme BDGL_003031 PF13193 AMP-binding enzyme C-terminal domain BDGL_003032 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BDGL_003032 PF02770 Acyl-CoA dehydrogenase, middle domain BDGL_003032 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BDGL_003033 PF00378 Enoyl-CoA hydratase/isomerase BDGL_003034 PF00378 Enoyl-CoA hydratase/isomerase BDGL_003035 PF00083 Sugar (and other) transporter BDGL_003035 PF07690 Major Facilitator Superfamily BDGL_003036 PF00765 Autoinducer synthase BDGL_003038 PF03472 Autoinducer binding domain BDGL_003038 PF00196 Bacterial regulatory proteins, luxR family BDGL_003039 PF00501 AMP-binding enzyme BDGL_003040 PF02770 Acyl-CoA dehydrogenase, middle domain BDGL_003040 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BDGL_003040 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BDGL_003041 PF14765 Polyketide synthase dehydratase BDGL_003041 PF16197 Ketoacyl-synthetase C-terminal extension BDGL_003041 PF00109 Beta-ketoacyl synthase, N-terminal domain BDGL_003041 PF02801 Beta-ketoacyl synthase, C-terminal domain BDGL_003041 PF08242 Methyltransferase domain BDGL_003041 PF00550 Phosphopantetheine attachment site BDGL_003041 PF00975 Thioesterase domain BDGL_003042 PF00975 Thioesterase domain BDGL_003042 PF00501 AMP-binding enzyme BDGL_003042 PF13193 AMP-binding enzyme C-terminal domain BDGL_003042 PF00668 Condensation domain BDGL_003042 PF00550 Phosphopantetheine attachment site BDGL_003045 PF16363 GDP-mannose 4,6 dehydratase BDGL_003046 PF01648 4'-phosphopantetheinyl transferase superfamily BDGL_003047 PF01722 BolA-like protein BDGL_003049 PF13614 AAA domain BDGL_003052 PF09335 SNARE associated Golgi protein BDGL_003053 PF07681 DoxX BDGL_003054 PF04286 Protein of unknown function (DUF445) BDGL_003055 PF00117 Glutamine amidotransferase class-I BDGL_003055 PF00958 GMP synthase C terminal domain BDGL_003055 PF02540 NAD synthase BDGL_003056 PF13427 Domain of unknown function (DUF4111) BDGL_003056 PF01909 Nucleotidyltransferase domain BDGL_003057 PF03551 Transcriptional regulator PadR-like family BDGL_003059 PF05726 Pirin C-terminal cupin domain BDGL_003059 PF02678 Pirin BDGL_003063 PF00750 tRNA synthetases class I (R) BDGL_003063 PF05746 DALR anticodon binding domain BDGL_003063 PF03485 Arginyl tRNA synthetase N terminal domain BDGL_003064 PF03949 Malic enzyme, NAD binding domain BDGL_003064 PF00390 Malic enzyme, N-terminal domain BDGL_003065 PF04261 Dyp-type peroxidase family BDGL_003066 PF01810 LysE type translocator BDGL_003067 PF00950 ABC 3 transport family BDGL_003068 PF00005 ABC transporter BDGL_003072 PF00119 ATP synthase A chain BDGL_003073 PF00137 ATP synthase subunit C BDGL_003074 PF00430 ATP synthase B/B' CF(0) BDGL_003075 PF00213 ATP synthase delta (OSCP) subunit BDGL_003076 PF02874 ATP synthase alpha/beta family, beta-barrel domain BDGL_003076 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BDGL_003076 PF00306 ATP synthase alpha/beta chain, C terminal domain BDGL_003077 PF00231 ATP synthase BDGL_003078 PF02874 ATP synthase alpha/beta family, beta-barrel domain BDGL_003078 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BDGL_003079 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BDGL_003081 PF00255 Glutathione peroxidase BDGL_003083 PF07690 Major Facilitator Superfamily BDGL_003084 PF00440 Bacterial regulatory proteins, tetR family BDGL_003085 PF00892 EamA-like transporter family BDGL_003086 PF01300 Telomere recombination BDGL_003087 PF02481 DNA recombination-mediator protein A BDGL_003087 PF17782 DprA winged helix domain BDGL_003089 PF01327 Polypeptide deformylase BDGL_003094 PF00440 Bacterial regulatory proteins, tetR family BDGL_003095 PF00291 Pyridoxal-phosphate dependent enzyme BDGL_003097 PF03358 NADPH-dependent FMN reductase BDGL_003101 PF11842 Domain of unknown function (DUF3362) BDGL_003101 PF08497 Radical SAM N-terminal BDGL_003101 PF04055 Radical SAM superfamily BDGL_003105 PF06123 Inner membrane protein CreD BDGL_003106 PF00672 HAMP domain BDGL_003106 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BDGL_003106 PF00512 His Kinase A (phospho-acceptor) domain BDGL_003107 PF00072 Response regulator receiver domain BDGL_003107 PF00486 Transcriptional regulatory protein, C terminal BDGL_003109 PF11798 IMS family HHH motif BDGL_003109 PF11799 impB/mucB/samB family C-terminal domain BDGL_003109 PF00817 impB/mucB/samB family BDGL_003110 PF01183 Glycosyl hydrolases family 25 BDGL_003111 PF07690 Major Facilitator Superfamily BDGL_003112 PF03641 Possible lysine decarboxylase BDGL_003113 PF03741 Integral membrane protein TerC family BDGL_003113 PF03471 Transporter associated domain BDGL_003114 PF02810 SEC-C motif BDGL_003115 PF03458 UPF0126 domain BDGL_003116 PF07690 Major Facilitator Superfamily BDGL_003117 PF03989 DNA gyrase C-terminal domain, beta-propeller BDGL_003117 PF00521 DNA gyrase/topoisomerase IV, subunit A BDGL_003118 PF13193 AMP-binding enzyme C-terminal domain BDGL_003118 PF00501 AMP-binding enzyme BDGL_003121 PF00719 Inorganic pyrophosphatase BDGL_003122 PF03573 outer membrane porin, OprD family BDGL_003125 PF00701 Dihydrodipicolinate synthetase family BDGL_003126 PF00596 Class II Aldolase and Adducin N-terminal domain BDGL_003127 PF00392 Bacterial regulatory proteins, gntR family BDGL_003127 PF00155 Aminotransferase class I and II BDGL_003128 PF03358 NADPH-dependent FMN reductase BDGL_003129 PF13335 Magnesium chelatase, subunit ChlI C-terminal BDGL_003129 PF01078 Magnesium chelatase, subunit ChlI BDGL_003131 PF00543 Nitrogen regulatory protein P-II BDGL_003132 PF00909 Ammonium Transporter Family BDGL_003133 PF03477 ATP cone domain BDGL_003134 PF01872 RibD C-terminal domain BDGL_003134 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BDGL_003136 PF00677 Lumazine binding domain BDGL_003140 PF02789 Cytosol aminopeptidase family, N-terminal domain BDGL_003140 PF00883 Cytosol aminopeptidase family, catalytic domain BDGL_003142 PF03739 Lipopolysaccharide export system permease LptF/LptG BDGL_003143 PF01676 Metalloenzyme superfamily BDGL_003143 PF06415 BPG-independent PGAM N-terminus (iPGM_N) BDGL_003144 PF03572 Peptidase family S41 BDGL_003144 PF00595 PDZ domain BDGL_003145 PF02954 Bacterial regulatory protein, Fis family BDGL_003145 PF00072 Response regulator receiver domain BDGL_003145 PF00158 Sigma-54 interaction domain BDGL_003146 PF00512 His Kinase A (phospho-acceptor) domain BDGL_003146 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BDGL_003147 PF00196 Bacterial regulatory proteins, luxR family BDGL_003147 PF00072 Response regulator receiver domain BDGL_003148 PF00768 D-alanyl-D-alanine carboxypeptidase BDGL_003149 PF00291 Pyridoxal-phosphate dependent enzyme BDGL_003150 PF01842 ACT domain BDGL_003150 PF00742 Homoserine dehydrogenase BDGL_003150 PF03447 Homoserine dehydrogenase, NAD binding domain BDGL_003151 PF13098 Thioredoxin-like domain BDGL_003151 PF10411 Disulfide bond isomerase protein N-terminus BDGL_003152 PF00589 Phage integrase family BDGL_003152 PF02899 Phage integrase, N-terminal SAM-like domain BDGL_003154 PF07664 Ferrous iron transport protein B C terminus BDGL_003154 PF02421 Ferrous iron transport protein B BDGL_003154 PF07670 Nucleoside recognition BDGL_003156 PF08245 Mur ligase middle domain BDGL_003156 PF02875 Mur ligase family, glutamate ligase domain BDGL_003157 PF01098 Cell cycle protein BDGL_003158 PF00749 tRNA synthetases class I (E and Q), catalytic domain BDGL_003159 PF01258 Prokaryotic dksA/traR C4-type zinc finger BDGL_003160 PF00149 Calcineurin-like phosphoesterase BDGL_003161 PF00293 NUDIX domain BDGL_003162 PF13667 ThiC-associated domain BDGL_003162 PF01964 Radical SAM ThiC family BDGL_003165 PF00892 EamA-like transporter family BDGL_003167 PF02321 Outer membrane efflux protein BDGL_003168 PF01895 PhoU domain BDGL_003169 PF04362 Bacterial Fe(2+) trafficking BDGL_003170 PF14698 Argininosuccinate lyase C-terminal BDGL_003170 PF00206 Lyase BDGL_003171 PF06580 Histidine kinase BDGL_003171 PF07694 5TMR of 5TMR-LYT BDGL_003171 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BDGL_003172 PF00072 Response regulator receiver domain BDGL_003172 PF04397 LytTr DNA-binding domain BDGL_003173 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BDGL_003173 PF03900 Porphobilinogen deaminase, C-terminal domain BDGL_003178 PF00816 H-NS histone family BDGL_003181 PF03958 Bacterial type II/III secretion system short domain BDGL_003181 PF00263 Bacterial type II and III secretion system protein BDGL_003182 PF12401 Protein of unknown function (DUF2662) BDGL_003182 PF00498 FHA domain BDGL_003183 PF13419 Haloacid dehalogenase-like hydrolase BDGL_003184 PF00425 chorismate binding enzyme BDGL_003184 PF04715 Anthranilate synthase component I, N terminal region BDGL_003185 PF00009 Elongation factor Tu GTP binding domain BDGL_003185 PF03143 Elongation factor Tu C-terminal domain BDGL_003185 PF03144 Elongation factor Tu domain 2 BDGL_003186 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BDGL_003187 PF00467 KOW motif BDGL_003187 PF02357 Transcription termination factor nusG BDGL_003188 PF00298 Ribosomal protein L11, RNA binding domain BDGL_003188 PF03946 Ribosomal protein L11, N-terminal domain BDGL_003189 PF00687 Ribosomal protein L1p/L10e family BDGL_003190 PF00466 Ribosomal protein L10 BDGL_003191 PF00542 Ribosomal protein L7/L12 C-terminal domain BDGL_003191 PF16320 Ribosomal protein L7/L12 dimerisation domain BDGL_003192 PF04560 RNA polymerase Rpb2, domain 7 BDGL_003192 PF00562 RNA polymerase Rpb2, domain 6 BDGL_003192 PF10385 RNA polymerase beta subunit external 1 domain BDGL_003192 PF04565 RNA polymerase Rpb2, domain 3 BDGL_003192 PF04561 RNA polymerase Rpb2, domain 2 BDGL_003192 PF04563 RNA polymerase beta subunit BDGL_003193 PF04565 RNA polymerase Rpb2, domain 3 BDGL_003193 PF04560 RNA polymerase Rpb2, domain 7 BDGL_003193 PF00562 RNA polymerase Rpb2, domain 6 BDGL_003193 PF10385 RNA polymerase beta subunit external 1 domain BDGL_003193 PF04563 RNA polymerase beta subunit BDGL_003193 PF04561 RNA polymerase Rpb2, domain 2 BDGL_003194 PF04997 RNA polymerase Rpb1, domain 1 BDGL_003194 PF00623 RNA polymerase Rpb1, domain 2 BDGL_003194 PF04998 RNA polymerase Rpb1, domain 5 BDGL_003194 PF04983 RNA polymerase Rpb1, domain 3 BDGL_003194 PF05000 RNA polymerase Rpb1, domain 4 BDGL_003199 PF13726 Na+-H+ antiporter family BDGL_003199 PF03553 Na+/H+ antiporter family BDGL_003202 PF00183 Hsp90 protein BDGL_003202 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BDGL_003205 PF01323 DSBA-like thioredoxin domain BDGL_003207 PF00376 MerR family regulatory protein BDGL_003207 PF09278 MerR, DNA binding BDGL_003211 PF02803 Thiolase, C-terminal domain BDGL_003211 PF00108 Thiolase, N-terminal domain BDGL_003212 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BDGL_003212 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BDGL_003212 PF00378 Enoyl-CoA hydratase/isomerase BDGL_003218 PF01541 GIY-YIG catalytic domain BDGL_003218 PF02151 UvrB/uvrC motif BDGL_003218 PF08459 UvrC Helix-hairpin-helix N-terminal BDGL_003220 PF01066 CDP-alcohol phosphatidyltransferase BDGL_003222 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BDGL_003222 PF02805 Metal binding domain of Ada BDGL_003222 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BDGL_003222 PF12833 Helix-turn-helix domain BDGL_003228 PF13533 Biotin-lipoyl like BDGL_003229 PF03652 Holliday junction resolvase BDGL_003230 PF02622 Uncharacterized ACR, COG1678 BDGL_003231 PF02463 RecF/RecN/SMC N terminal domain BDGL_003233 PF06865 Pyrimidine/purine nucleoside phosphorylase BDGL_003234 PF00588 SpoU rRNA Methylase family BDGL_003234 PF08032 RNA 2'-O ribose methyltransferase substrate binding BDGL_003236 PF01121 Dephospho-CoA kinase BDGL_003237 PF01478 Type IV leader peptidase family BDGL_003237 PF06750 Bacterial Peptidase A24 N-terminal domain BDGL_003238 PF01478 Type IV leader peptidase family BDGL_003238 PF06750 Bacterial Peptidase A24 N-terminal domain BDGL_003239 PF00482 Type II secretion system (T2SS), protein F BDGL_003240 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BDGL_003240 PF00437 Type II/IV secretion system protein BDGL_003241 PF00121 Triosephosphate isomerase BDGL_003242 PF03840 Preprotein translocase SecG subunit BDGL_003243 PF02576 RimP N-terminal domain BDGL_003243 PF17384 RimP C-terminal SH3 domain BDGL_003244 PF08529 NusA N-terminal domain BDGL_003244 PF00575 S1 RNA binding domain BDGL_003244 PF13184 NusA-like KH domain BDGL_003245 PF00009 Elongation factor Tu GTP binding domain BDGL_003245 PF11987 Translation-initiation factor 2 BDGL_003245 PF08364 Bacterial translation initiation factor IF-2 associated region BDGL_003245 PF04760 Translation initiation factor IF-2, N-terminal region BDGL_003246 PF02033 Ribosome-binding factor A BDGL_003247 PF03334 Na+/H+ antiporter subunit BDGL_003248 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) BDGL_003249 PF01899 Na+/H+ ion antiporter subunit BDGL_003250 PF00361 Proton-conducting membrane transporter BDGL_003251 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BDGL_003252 PF00361 Proton-conducting membrane transporter BDGL_003252 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BDGL_003252 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter BDGL_003252 PF13244 Domain of unknown function (DUF4040) BDGL_003256 PF01502 Phosphoribosyl-AMP cyclohydrolase BDGL_003257 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BDGL_003258 PF01494 FAD binding domain BDGL_003259 PF03109 ABC1 family BDGL_003261 PF01209 ubiE/COQ5 methyltransferase family BDGL_003263 PF03976 Polyphosphate kinase 2 (PPK2) BDGL_003265 PF17946 RecC C-terminal domain BDGL_003267 PF12705 PD-(D/E)XK nuclease superfamily BDGL_003267 PF13361 UvrD-like helicase C-terminal domain BDGL_003267 PF00580 UvrD/REP helicase N-terminal domain BDGL_003268 PF13538 UvrD-like helicase C-terminal domain BDGL_003269 PF00144 Beta-lactamase BDGL_003270 PF00312 Ribosomal protein S15 BDGL_003271 PF00575 S1 RNA binding domain BDGL_003271 PF03725 3' exoribonuclease family, domain 2 BDGL_003271 PF01138 3' exoribonuclease family, domain 1 BDGL_003271 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BDGL_003271 PF00013 KH domain BDGL_003272 PF01544 CorA-like Mg2+ transporter protein BDGL_003274 PF00226 DnaJ domain BDGL_003274 PF01556 DnaJ C terminal domain BDGL_003276 PF01430 Hsp33 protein BDGL_003277 PF00999 Sodium/hydrogen exchanger family BDGL_003277 PF02254 TrkA-N domain BDGL_003278 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BDGL_003278 PF00271 Helicase conserved C-terminal domain BDGL_003278 PF00270 DEAD/DEAH box helicase BDGL_003278 PF18074 Primosomal protein N C-terminal domain BDGL_003278 PF17764 3′ DNA-binding domain (3′BD) BDGL_003279 PF00482 Type II secretion system (T2SS), protein F BDGL_003280 PF08334 Type II secretion system (T2SS), protein G BDGL_003280 PF07963 Prokaryotic N-terminal methylation motif BDGL_003282 PF01588 Putative tRNA binding domain BDGL_003283 PF00795 Carbon-nitrogen hydrolase BDGL_003284 PF03471 Transporter associated domain BDGL_003284 PF00571 CBS domain BDGL_003285 PF01206 Sulfurtransferase TusA BDGL_003289 PF01177 Asp/Glu/Hydantoin racemase BDGL_003291 PF00762 Ferrochelatase BDGL_003292 PF00753 Metallo-beta-lactamase superfamily BDGL_003293 PF03884 DNA gyrase inhibitor YacG BDGL_003295 PF07992 Pyridine nucleotide-disulphide oxidoreductase BDGL_003295 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BDGL_003297 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BDGL_003300 PF01197 Ribosomal protein L31 BDGL_003301 PF03109 ABC1 family BDGL_003302 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BDGL_003302 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BDGL_003303 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BDGL_003303 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BDGL_003303 PF02770 Acyl-CoA dehydrogenase, middle domain BDGL_003304 PF01554 MatE BDGL_003306 PF04055 Radical SAM superfamily BDGL_003306 PF06969 HemN C-terminal domain BDGL_003307 PF00106 short chain dehydrogenase BDGL_003308 PF03466 LysR substrate binding domain BDGL_003308 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_003309 PF00501 AMP-binding enzyme BDGL_003309 PF13193 AMP-binding enzyme C-terminal domain BDGL_003310 PF00575 S1 RNA binding domain BDGL_003310 PF10150 Ribonuclease E/G family BDGL_003310 PF12111 Polyribonucleotide phosphorylase C terminal BDGL_003311 PF01479 S4 domain BDGL_003311 PF00849 RNA pseudouridylate synthase BDGL_003313 PF13419 Haloacid dehalogenase-like hydrolase BDGL_003314 PF08279 HTH domain BDGL_003314 PF13280 WYL domain BDGL_003315 PF02798 Glutathione S-transferase, N-terminal domain BDGL_003317 PF03466 LysR substrate binding domain BDGL_003317 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_003318 PF12706 Beta-lactamase superfamily domain BDGL_003319 PF00141 Peroxidase BDGL_003320 PF01590 GAF domain BDGL_003320 PF00391 PEP-utilising enzyme, mobile domain BDGL_003320 PF02896 PEP-utilising enzyme, TIM barrel domain BDGL_003320 PF05524 PEP-utilising enzyme, N-terminal BDGL_003321 PF00293 NUDIX domain BDGL_003325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_003325 PF03466 LysR substrate binding domain BDGL_003327 PF00330 Aconitase family (aconitate hydratase) BDGL_003328 PF00694 Aconitase C-terminal domain BDGL_003330 PF00180 Isocitrate/isopropylmalate dehydrogenase BDGL_003333 PF01176 Translation initiation factor 1A / IF-1 BDGL_003335 PF01416 tRNA pseudouridine synthase BDGL_003339 PF01118 Semialdehyde dehydrogenase, NAD binding domain BDGL_003339 PF02774 Semialdehyde dehydrogenase, dimerisation domain BDGL_003341 PF00375 Sodium:dicarboxylate symporter family BDGL_003343 PF03279 Bacterial lipid A biosynthesis acyltransferase BDGL_003345 PF12848 ABC transporter BDGL_003345 PF16326 ABC transporter C-terminal domain BDGL_003345 PF00005 ABC transporter BDGL_003347 PF00107 Zinc-binding dehydrogenase BDGL_003347 PF08240 Alcohol dehydrogenase GroES-like domain BDGL_003348 PF01638 HxlR-like helix-turn-helix BDGL_003350 PF08272 Topoisomerase I zinc-ribbon-like BDGL_003350 PF01131 DNA topoisomerase BDGL_003350 PF01751 Toprim domain BDGL_003350 PF01396 Topoisomerase DNA binding C4 zinc finger BDGL_003353 PF13361 UvrD-like helicase C-terminal domain BDGL_003353 PF00580 UvrD/REP helicase N-terminal domain BDGL_003354 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) BDGL_003358 PF02254 TrkA-N domain BDGL_003358 PF00999 Sodium/hydrogen exchanger family BDGL_003359 PF00471 Ribosomal protein L33 BDGL_003360 PF00830 Ribosomal L28 family BDGL_003361 PF00171 Aldehyde dehydrogenase family BDGL_003363 PF01842 ACT domain BDGL_003363 PF00551 Formyl transferase BDGL_003365 PF01618 MotA/TolQ/ExbB proton channel family BDGL_003367 PF01625 Peptide methionine sulfoxide reductase BDGL_003369 PF00186 Dihydrofolate reductase BDGL_003370 PF00303 Thymidylate synthase BDGL_003373 PF01790 Prolipoprotein diacylglyceryl transferase BDGL_003377 PF00902 Sec-independent protein translocase protein (TatC) BDGL_003378 PF02416 mttA/Hcf106 family BDGL_003379 PF02416 mttA/Hcf106 family BDGL_003381 PF01725 Ham1 family BDGL_003383 PF00561 alpha/beta hydrolase fold BDGL_003383 PF07021 Methionine biosynthesis protein MetW BDGL_003384 PF00561 alpha/beta hydrolase fold BDGL_003385 PF08502 LeuA allosteric (dimerisation) domain BDGL_003385 PF00682 HMGL-like BDGL_003386 PF18331 PKHD-type hydroxylase C-terminal domain BDGL_003386 PF13640 2OG-Fe(II) oxygenase superfamily BDGL_003387 PF00593 TonB dependent receptor BDGL_003387 PF07715 TonB-dependent Receptor Plug Domain BDGL_003388 PF05698 Bacterial trigger factor protein (TF) C-terminus BDGL_003388 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BDGL_003388 PF05697 Bacterial trigger factor protein (TF) BDGL_003389 PF00574 Clp protease BDGL_003390 PF07724 AAA domain (Cdc48 subfamily) BDGL_003390 PF10431 C-terminal, D2-small domain, of ClpB protein BDGL_003390 PF06689 ClpX C4-type zinc finger BDGL_003393 PF05683 Fumarase C-terminus BDGL_003393 PF05681 Fumarate hydratase (Fumerase) BDGL_003394 PF01515 Phosphate acetyl/butaryl transferase BDGL_003394 PF07085 DRTGG domain BDGL_003395 PF00871 Acetokinase family BDGL_003397 PF00920 Dehydratase family BDGL_003398 PF01081 KDPG and KHG aldolase BDGL_003399 PF02447 GntP family permease BDGL_003400 PF01202 Shikimate kinase BDGL_003401 PF00171 Aldehyde dehydrogenase family BDGL_003402 PF00171 Aldehyde dehydrogenase family BDGL_003403 PF00561 alpha/beta hydrolase fold BDGL_003405 PF00933 Glycosyl hydrolase family 3 N terminal domain BDGL_003406 PF03572 Peptidase family S41 BDGL_003406 PF17804 Tail specific protease N-terminal domain BDGL_003406 PF00595 PDZ domain BDGL_003406 PF11818 C-terminal domain of tail specific protease (DUF3340) BDGL_003407 PF13439 Glycosyltransferase Family 4 BDGL_003407 PF00534 Glycosyl transferases group 1 BDGL_003408 PF01569 PAP2 superfamily BDGL_003409 PF04384 Iron-sulphur cluster assembly BDGL_003410 PF00334 Nucleoside diphosphate kinase BDGL_003411 PF04055 Radical SAM superfamily BDGL_003413 PF13464 Domain of unknown function (DUF4115) BDGL_003414 PF04551 GcpE protein BDGL_003415 PF04551 GcpE protein BDGL_003416 PF03129 Anticodon binding domain BDGL_003416 PF13393 Histidyl-tRNA synthetase BDGL_003418 PF01011 PQQ enzyme repeat BDGL_003418 PF13360 PQQ-like domain BDGL_003419 PF01926 50S ribosome-binding GTPase BDGL_003419 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BDGL_003422 PF00550 Phosphopantetheine attachment site BDGL_003423 PF00550 Phosphopantetheine attachment site BDGL_003425 PF13193 AMP-binding enzyme C-terminal domain BDGL_003425 PF00501 AMP-binding enzyme BDGL_003426 PF00535 Glycosyl transferase family 2 BDGL_003428 PF00221 Aromatic amino acid lyase BDGL_003432 PF04820 Tryptophan halogenase BDGL_003434 PF02801 Beta-ketoacyl synthase, C-terminal domain BDGL_003434 PF00109 Beta-ketoacyl synthase, N-terminal domain BDGL_003437 PF02801 Beta-ketoacyl synthase, C-terminal domain BDGL_003437 PF00109 Beta-ketoacyl synthase, N-terminal domain BDGL_003439 PF01648 4'-phosphopantetheinyl transferase superfamily BDGL_003440 PF02556 Preprotein translocase subunit SecB BDGL_003441 PF00462 Glutaredoxin BDGL_003443 PF03193 RsgA GTPase BDGL_003444 PF00929 Exonuclease BDGL_003447 PF02321 Outer membrane efflux protein BDGL_003448 PF00005 ABC transporter BDGL_003448 PF02687 FtsX-like permease family BDGL_003448 PF12704 MacB-like periplasmic core domain BDGL_003449 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BDGL_003452 PF09334 tRNA synthetases class I (M) BDGL_003452 PF00133 tRNA synthetases class I (I, L, M and V) BDGL_003452 PF13603 Leucyl-tRNA synthetase, Domain 2 BDGL_003452 PF08264 Anticodon-binding domain of tRNA BDGL_003453 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BDGL_003453 PF00205 Thiamine pyrophosphate enzyme, central domain BDGL_003453 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BDGL_003454 PF10369 Small subunit of acetolactate synthase BDGL_003455 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BDGL_003455 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BDGL_003456 PF00563 EAL domain BDGL_003456 PF03707 Bacterial signalling protein N terminal repeat BDGL_003456 PF00990 Diguanylate cyclase, GGDEF domain BDGL_003459 PF00009 Elongation factor Tu GTP binding domain BDGL_003459 PF03144 Elongation factor Tu domain 2 BDGL_003459 PF16658 Class II release factor RF3, C-terminal domain BDGL_003462 PF01026 TatD related DNase BDGL_003463 PF00330 Aconitase family (aconitate hydratase) BDGL_003463 PF00694 Aconitase C-terminal domain BDGL_003464 PF00899 ThiF family BDGL_003466 PF03466 LysR substrate binding domain BDGL_003466 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_003469 PF01207 Dihydrouridine synthase (Dus) BDGL_003470 PF07690 Major Facilitator Superfamily BDGL_003472 PF00892 EamA-like transporter family BDGL_003473 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BDGL_003473 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BDGL_003474 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch BDGL_003475 PF02233 NAD(P) transhydrogenase beta subunit BDGL_003476 PF00106 short chain dehydrogenase BDGL_003479 PF01261 Xylose isomerase-like TIM barrel BDGL_003480 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BDGL_003480 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BDGL_003481 PF00378 Enoyl-CoA hydratase/isomerase BDGL_003482 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BDGL_003482 PF01627 Hpt domain BDGL_003482 PF00512 His Kinase A (phospho-acceptor) domain BDGL_003482 PF00072 Response regulator receiver domain BDGL_003482 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BDGL_003482 PF00672 HAMP domain BDGL_003483 PF00291 Pyridoxal-phosphate dependent enzyme BDGL_003485 PF05958 tRNA (Uracil-5-)-methyltransferase BDGL_003486 PF13291 ACT domain BDGL_003486 PF02824 TGS domain BDGL_003486 PF04607 Region found in RelA / SpoT proteins BDGL_003488 PF03819 MazG nucleotide pyrophosphohydrolase domain BDGL_003490 PF12627 Probable RNA and SrmB- binding site of polymerase A BDGL_003490 PF12626 Polymerase A arginine-rich C-terminus BDGL_003490 PF01743 Poly A polymerase head domain BDGL_003491 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BDGL_003492 PF02548 Ketopantoate hydroxymethyltransferase BDGL_003493 PF02569 Pantoate-beta-alanine ligase BDGL_003494 PF03668 P-loop ATPase protein family BDGL_003495 PF00381 PTS HPr component phosphorylation site BDGL_003496 PF04751 Protein of unknown function (DUF615) BDGL_003497 PF13193 AMP-binding enzyme C-terminal domain BDGL_003497 PF00501 AMP-binding enzyme BDGL_003498 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BDGL_003498 PF03129 Anticodon binding domain BDGL_003498 PF02824 TGS domain BDGL_003498 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BDGL_003499 PF00707 Translation initiation factor IF-3, C-terminal domain BDGL_003499 PF05198 Translation initiation factor IF-3, N-terminal domain BDGL_003500 PF00043 Glutathione S-transferase, C-terminal domain BDGL_003500 PF02798 Glutathione S-transferase, N-terminal domain BDGL_003501 PF09335 SNARE associated Golgi protein BDGL_003502 PF07690 Major Facilitator Superfamily BDGL_003504 PF01632 Ribosomal protein L35 BDGL_003505 PF00453 Ribosomal protein L20 BDGL_003507 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BDGL_003507 PF01409 tRNA synthetases class II core domain (F) BDGL_003508 PF03483 B3/4 domain BDGL_003508 PF03484 tRNA synthetase B5 domain BDGL_003508 PF03147 Ferredoxin-fold anticodon binding domain BDGL_003508 PF01588 Putative tRNA binding domain BDGL_003508 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BDGL_003509 PF00216 Bacterial DNA-binding protein BDGL_003512 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BDGL_003512 PF07497 Rho termination factor, RNA-binding domain BDGL_003512 PF07498 Rho termination factor, N-terminal domain BDGL_003513 PF00085 Thioredoxin BDGL_003514 PF02541 Ppx/GppA phosphatase family BDGL_003515 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BDGL_003516 PF11734 TilS substrate C-terminal domain BDGL_003516 PF09179 TilS substrate binding domain BDGL_003516 PF01171 PP-loop family BDGL_003517 PF03807 NADP oxidoreductase coenzyme F420-dependent BDGL_003517 PF14748 Pyrroline-5-carboxylate reductase dimerisation BDGL_003518 PF02325 YGGT family BDGL_003519 PF01612 3'-5' exonuclease BDGL_003519 PF00476 DNA polymerase family A BDGL_003519 PF01367 5'-3' exonuclease, C-terminal SAM fold BDGL_003519 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BDGL_003523 PF00437 Type II/IV secretion system protein BDGL_003524 PF02566 OsmC-like protein BDGL_003525 PF01047 MarR family BDGL_003527 PF00795 Carbon-nitrogen hydrolase BDGL_003531 PF04963 Sigma-54 factor, core binding domain BDGL_003531 PF00309 Sigma-54 factor, Activator interacting domain (AID) BDGL_003531 PF04552 Sigma-54, DNA binding domain BDGL_003532 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BDGL_003533 PF01722 BolA-like protein BDGL_003534 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BDGL_003535 PF01634 ATP phosphoribosyltransferase BDGL_003536 PF00815 Histidinol dehydrogenase BDGL_003537 PF00155 Aminotransferase class I and II BDGL_003538 PF00425 chorismate binding enzyme BDGL_003538 PF04715 Anthranilate synthase component I, N terminal region BDGL_003547 PF00293 NUDIX domain BDGL_003548 PF00132 Bacterial transferase hexapeptide (six repeats) BDGL_003549 PF00814 Glycoprotease family BDGL_003550 PF04445 Putative SAM-dependent methyltransferase BDGL_003552 PF00756 Putative esterase BDGL_003554 PF00834 Ribulose-phosphate 3 epimerase family BDGL_003557 PF07731 Multicopper oxidase BDGL_003557 PF00394 Multicopper oxidase BDGL_003557 PF07732 Multicopper oxidase BDGL_003560 PF00893 Small Multidrug Resistance protein BDGL_003561 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BDGL_003561 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BDGL_003562 PF01960 ArgJ family BDGL_003563 PF02445 Quinolinate synthetase A protein BDGL_003564 PF00962 Adenosine/AMP deaminase BDGL_003565 PF00107 Zinc-binding dehydrogenase BDGL_003565 PF08240 Alcohol dehydrogenase GroES-like domain BDGL_003566 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_003566 PF03466 LysR substrate binding domain BDGL_003567 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BDGL_003567 PF02770 Acyl-CoA dehydrogenase, middle domain BDGL_003567 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BDGL_003568 PF07690 Major Facilitator Superfamily BDGL_003569 PF02515 CoA-transferase family III BDGL_003571 PF17932 Tetracyclin repressor-like, C-terminal domain BDGL_003571 PF00440 Bacterial regulatory proteins, tetR family BDGL_003574 PF14537 Cytochrome c3 BDGL_003574 PF00890 FAD binding domain BDGL_003575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_003575 PF03466 LysR substrate binding domain BDGL_003577 PF07690 Major Facilitator Superfamily BDGL_003578 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_003578 PF03466 LysR substrate binding domain BDGL_003581 PF01970 Tripartite tricarboxylate transporter TctA family BDGL_003584 PF01546 Peptidase family M20/M25/M40 BDGL_003584 PF07687 Peptidase dimerisation domain BDGL_003585 PF12833 Helix-turn-helix domain BDGL_003585 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term BDGL_003587 PF01810 LysE type translocator BDGL_003588 PF03466 LysR substrate binding domain BDGL_003588 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BDGL_003590 PF01717 Cobalamin-independent synthase, Catalytic domain BDGL_003590 PF08267 Cobalamin-independent synthase, N-terminal domain BDGL_003591 PF01613 Flavin reductase like domain BDGL_003596 PF02321 Outer membrane efflux protein BDGL_003597 PF00005 ABC transporter BDGL_003597 PF00664 ABC transporter transmembrane region