BDGL_000009 SM00857 Resolvase, N terminal domain BDGL_000014 SM00448 cheY-homologous receiver domain BDGL_000014 SM00862 Transcriptional regulatory protein, C terminal BDGL_000015 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BDGL_000015 SM00387 Histidine kinase-like ATPases BDGL_000015 SM00388 His Kinase A (phosphoacceptor) domain BDGL_000017 SM00267 diguanylate cyclase BDGL_000022 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BDGL_000023 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BDGL_000023 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BDGL_000032 SM00357 Cold shock protein domain BDGL_000063 SM00382 ATPases associated with a variety of cellular activities BDGL_000063 SM00962 SRP54-type protein, GTPase domain BDGL_000063 SM00963 SRP54-type protein, helical bundle domain BDGL_000067 SM00345 helix_turn_helix gluconate operon transcriptional repressor BDGL_000069 SM00771 ZipA, C-terminal domain (FtsZ-binding) BDGL_000070 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BDGL_000070 SM00292 breast cancer carboxy-terminal domain BDGL_000070 SM00532 Ligase N family BDGL_000080 SM00363 S4 RNA-binding domain BDGL_000087 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BDGL_000088 SM00822 BDGL_000088 BDGL_000090 SM00257 Lysin motif BDGL_000100 SM01400 BDGL_000100 BDGL_000103 SM00028 Tetratricopeptide repeats BDGL_000106 SM00400 zinc finger BDGL_000106 SM00493 BDGL_000106 BDGL_000116 SM01329 BDGL_000116 BDGL_000127 SM00825 Beta-ketoacyl synthase BDGL_000131 SM00838 Elongation factor G C-terminus BDGL_000131 SM00889 Elongation factor G, domain IV BDGL_000139 SM00843 BDGL_000139 BDGL_000147 SM00563 Phosphate acyltransferases BDGL_000160 SM00382 ATPases associated with a variety of cellular activities BDGL_000161 SM00382 ATPases associated with a variety of cellular activities BDGL_000171 SM01004 Delta-aminolevulinic acid dehydratase BDGL_000180 SM00487 DEAD-like helicases superfamily BDGL_000187 SM01130 BDGL_000187 BDGL_000191 SM00965 Secretin and TonB N terminus short domain BDGL_000214 SM01322 BDGL_000214 BDGL_000222 SM00346 helix_turn_helix isocitrate lyase regulation BDGL_000226 SM00822 BDGL_000226 BDGL_000241 SM00342 helix_turn_helix, arabinose operon control protein BDGL_000246 SM00822 BDGL_000246 BDGL_000249 SM00861 Transketolase, pyrimidine binding domain BDGL_000251 SM01018 B12 binding domain BDGL_000264 SM00947 Carbonic anhydrase BDGL_000266 SM00382 ATPases associated with a variety of cellular activities BDGL_000287 SM01091 Transporter associated domain BDGL_000297 SM00988 UreE urease accessory protein, N-terminal domain BDGL_000307 SM00478 endonuclease III BDGL_000309 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BDGL_000313 SM00382 ATPases associated with a variety of cellular activities BDGL_000313 SM00464 Found in ATP-dependent protease La (LON) BDGL_000321 SM01011 Aminopeptidase P, N-terminal domain BDGL_000325 SM00422 helix_turn_helix, mercury resistance BDGL_000336 SM00479 BDGL_000336 BDGL_000337 SM00257 Lysin motif BDGL_000341 SM00382 ATPases associated with a variety of cellular activities BDGL_000344 SM00479 BDGL_000344 BDGL_000346 SM00267 diguanylate cyclase BDGL_000364 SM00345 helix_turn_helix gluconate operon transcriptional repressor BDGL_000364 SM00895 BDGL_000364 BDGL_000367 SM00344 helix_turn_helix ASNC type BDGL_000376 SM00342 helix_turn_helix, arabinose operon control protein BDGL_000378 SM00858 BDGL_000378 BDGL_000380 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BDGL_000381 SM01130 BDGL_000381 BDGL_000383 SM00345 helix_turn_helix gluconate operon transcriptional repressor BDGL_000383 SM00895 BDGL_000383 BDGL_000393 SM00347 helix_turn_helix multiple antibiotic resistance protein BDGL_000394 SM00345 helix_turn_helix gluconate operon transcriptional repressor BDGL_000394 SM00895 BDGL_000394 BDGL_000405 SM00822 BDGL_000405 BDGL_000407 SM00342 helix_turn_helix, arabinose operon control protein BDGL_000426 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BDGL_000427 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BDGL_000429 SM00788 Adenylosuccinate synthetase BDGL_000433 SM00100 Cyclic nucleotide-monophosphate binding domain BDGL_000433 SM00419 helix_turn_helix, cAMP Regulatory protein BDGL_000438 SM00382 ATPases associated with a variety of cellular activities BDGL_000438 SM01086 C-terminal, D2-small domain, of ClpB protein BDGL_000441 SM00981 BDGL_000441 BDGL_000458 SM00382 ATPases associated with a variety of cellular activities BDGL_000458 SM00487 DEAD-like helicases superfamily BDGL_000458 SM00490 helicase superfamily c-terminal domain BDGL_000458 SM00847 Helicase associated domain (HA2) Add an annotation BDGL_000477 SM00382 ATPases associated with a variety of cellular activities BDGL_000477 SM00989 BDGL_000477 BDGL_000480 SM00422 helix_turn_helix, mercury resistance BDGL_000489 SM00530 Helix-turn-helix XRE-family like proteins BDGL_000495 SM00357 Cold shock protein domain BDGL_000499 SM00344 helix_turn_helix ASNC type BDGL_000520 SM00840 BDGL_000520 BDGL_000521 SM00116 Domain in cystathionine beta-synthase and other proteins. BDGL_000525 SM00382 ATPases associated with a variety of cellular activities BDGL_000528 SM00382 ATPases associated with a variety of cellular activities BDGL_000538 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BDGL_000538 SM00534 ATPase domain of DNA mismatch repair MUTS family BDGL_000540 SM00342 helix_turn_helix, arabinose operon control protein BDGL_000549 SM00357 Cold shock protein domain BDGL_000554 SM01060 BDGL_000554 BDGL_000559 SM00972 Spore Coat Protein U domain BDGL_000560 SM00422 helix_turn_helix, mercury resistance BDGL_000566 SM00965 Secretin and TonB N terminus short domain BDGL_000569 SM00052 Putative diguanylate phosphodiesterase BDGL_000601 SM00796 Allophanate hydrolase subunit 1 BDGL_000601 SM00797 Allophanate hydrolase subunit 2 BDGL_000602 SM00878 Biotin carboxylase C-terminal domain BDGL_000610 SM00829 Enoylreductase BDGL_000613 SM00796 Allophanate hydrolase subunit 1 BDGL_000613 SM00797 Allophanate hydrolase subunit 2 BDGL_000613 SM00878 Biotin carboxylase C-terminal domain BDGL_000621 SM00382 ATPases associated with a variety of cellular activities BDGL_000637 SM00671 Sel1-like repeats. BDGL_000652 SM00382 ATPases associated with a variety of cellular activities BDGL_000652 SM01086 C-terminal, D2-small domain, of ClpB protein BDGL_000659 SM00248 ankyrin repeats BDGL_000664 SM00345 helix_turn_helix gluconate operon transcriptional repressor BDGL_000666 SM00422 helix_turn_helix, mercury resistance BDGL_000669 SM01130 BDGL_000669 BDGL_000671 SM00345 helix_turn_helix gluconate operon transcriptional repressor BDGL_000671 SM00895 BDGL_000671 BDGL_000676 SM00342 helix_turn_helix, arabinose operon control protein BDGL_000701 SM00345 helix_turn_helix gluconate operon transcriptional repressor BDGL_000701 SM00895 BDGL_000701 BDGL_000704 SM00903 Flavin reductase like domain BDGL_000714 SM00346 helix_turn_helix isocitrate lyase regulation BDGL_000716 SM01005 Alanine racemase, C-terminal domain BDGL_000717 SM00345 helix_turn_helix gluconate operon transcriptional repressor BDGL_000717 SM00866 BDGL_000717 BDGL_000719 SM00382 ATPases associated with a variety of cellular activities BDGL_000727 SM00346 helix_turn_helix isocitrate lyase regulation BDGL_000731 SM00346 helix_turn_helix isocitrate lyase regulation BDGL_000738 SM00882 Coenzyme A transferase BDGL_000739 SM00882 Coenzyme A transferase BDGL_000748 SM00878 Biotin carboxylase C-terminal domain BDGL_000765 SM01236 BDGL_000765 BDGL_000766 SM01060 BDGL_000766 BDGL_000770 SM00384 DNA binding domain with preference for A/T rich regions BDGL_000774 SM00344 helix_turn_helix ASNC type BDGL_000776 SM00387 Histidine kinase-like ATPases BDGL_000776 SM00388 His Kinase A (phosphoacceptor) domain BDGL_000776 SM00448 cheY-homologous receiver domain BDGL_000777 SM00421 helix_turn_helix, Lux Regulon BDGL_000777 SM00448 cheY-homologous receiver domain BDGL_000782 SM00382 ATPases associated with a variety of cellular activities BDGL_000783 SM00062 Bacterial periplasmic substrate-binding proteins BDGL_000784 SM00062 Bacterial periplasmic substrate-binding proteins BDGL_000791 SM00450 Rhodanese Homology Domain BDGL_000792 SM00822 BDGL_000792 BDGL_000794 SM00342 helix_turn_helix, arabinose operon control protein BDGL_000802 SM00345 helix_turn_helix gluconate operon transcriptional repressor BDGL_000812 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BDGL_000816 SM00345 helix_turn_helix gluconate operon transcriptional repressor BDGL_000825 SM00062 Bacterial periplasmic substrate-binding proteins BDGL_000826 SM00382 ATPases associated with a variety of cellular activities BDGL_000831 SM00345 helix_turn_helix gluconate operon transcriptional repressor BDGL_000831 SM00895 BDGL_000831 BDGL_000836 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BDGL_000846 SM00481 DNA polymerase alpha chain like domain BDGL_000847 SM00870 BDGL_000847 BDGL_000852 SM00342 helix_turn_helix, arabinose operon control protein BDGL_000855 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BDGL_000862 SM00100 Cyclic nucleotide-monophosphate binding domain BDGL_000862 SM00419 helix_turn_helix, cAMP Regulatory protein BDGL_000866 SM00382 ATPases associated with a variety of cellular activities BDGL_000866 SM00930 BDGL_000866 BDGL_000873 SM00062 Bacterial periplasmic substrate-binding proteins BDGL_000876 SM00382 ATPases associated with a variety of cellular activities BDGL_000878 SM00344 helix_turn_helix ASNC type BDGL_000883 SM01236 BDGL_000883 BDGL_000896 SM00729 Elongator protein 3, MiaB family, Radical SAM BDGL_000896 SM00876 Biotin and Thiamin Synthesis associated domain BDGL_000901 SM00530 Helix-turn-helix XRE-family like proteins BDGL_000909 SM00861 Transketolase, pyrimidine binding domain BDGL_000911 SM00867 YceI-like domain BDGL_000918 SM00344 helix_turn_helix ASNC type BDGL_000922 SM00342 helix_turn_helix, arabinose operon control protein BDGL_000924 SM00382 ATPases associated with a variety of cellular activities BDGL_000928 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BDGL_000930 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. BDGL_000942 SM00470 ParB-like nuclease domain BDGL_000945 SM00382 ATPases associated with a variety of cellular activities BDGL_000957 SM00986 Uracil DNA glycosylase superfamily BDGL_000957 SM00987 UreE urease accessory protein, C-terminal domain BDGL_000962 SM00316 Ribosomal protein S1-like RNA-binding domain BDGL_000963 SM00411 bacterial (prokaryotic) histone like domain BDGL_000965 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BDGL_000968 SM00342 helix_turn_helix, arabinose operon control protein BDGL_000983 SM00382 ATPases associated with a variety of cellular activities BDGL_000994 SM00487 DEAD-like helicases superfamily BDGL_000994 SM00490 helicase superfamily c-terminal domain BDGL_000994 SM00982 BDGL_000994 BDGL_000994 SM01058 CarD-like/TRCF domain BDGL_000996 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain BDGL_000999 SM00271 DnaJ molecular chaperone homology domain BDGL_001006 SM00411 bacterial (prokaryotic) histone like domain BDGL_001008 SM00342 helix_turn_helix, arabinose operon control protein BDGL_001020 SM00855 Phosphoglycerate mutase family BDGL_001036 SM01324 BDGL_001036 BDGL_001042 SM00493 BDGL_001042 BDGL_001043 SM00341 Helicase and RNase D C-terminal BDGL_001043 SM00474 3'-5' exonuclease BDGL_001051 SM00382 ATPases associated with a variety of cellular activities BDGL_001057 SM00267 diguanylate cyclase BDGL_001060 SM00729 Elongator protein 3, MiaB family, Radical SAM BDGL_001062 SM00861 Transketolase, pyrimidine binding domain BDGL_001066 SM00829 Enoylreductase BDGL_001068 SM00382 ATPases associated with a variety of cellular activities BDGL_001069 SM00849 Metallo-beta-lactamase superfamily BDGL_001075 SM00342 helix_turn_helix, arabinose operon control protein BDGL_001079 SM00345 helix_turn_helix gluconate operon transcriptional repressor BDGL_001079 SM00866 BDGL_001079 BDGL_001084 SM00382 ATPases associated with a variety of cellular activities BDGL_001085 SM00567 E-Z type HEAT repeats BDGL_001096 SM00882 Coenzyme A transferase BDGL_001097 SM00882 Coenzyme A transferase BDGL_001107 SM00342 helix_turn_helix, arabinose operon control protein BDGL_001113 SM00903 Flavin reductase like domain BDGL_001115 SM00342 helix_turn_helix, arabinose operon control protein BDGL_001122 SM00382 ATPases associated with a variety of cellular activities BDGL_001130 SM00729 Elongator protein 3, MiaB family, Radical SAM BDGL_001136 SM00448 cheY-homologous receiver domain BDGL_001136 SM00862 Transcriptional regulatory protein, C terminal BDGL_001137 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BDGL_001137 SM00387 Histidine kinase-like ATPases BDGL_001137 SM00388 His Kinase A (phosphoacceptor) domain BDGL_001139 SM00155 Phospholipase D. Active site motifs. BDGL_001145 SM00829 Enoylreductase BDGL_001153 SM01007 Class II Aldolase and Adducin N-terminal domain BDGL_001158 SM00382 ATPases associated with a variety of cellular activities BDGL_001161 SM00382 ATPases associated with a variety of cellular activities BDGL_001162 SM00382 ATPases associated with a variety of cellular activities BDGL_001167 SM00382 ATPases associated with a variety of cellular activities BDGL_001171 SM00382 ATPases associated with a variety of cellular activities BDGL_001185 SM00382 ATPases associated with a variety of cellular activities BDGL_001197 SM00419 helix_turn_helix, cAMP Regulatory protein BDGL_001207 SM00912 haemagglutination activity domain BDGL_001210 SM00342 helix_turn_helix, arabinose operon control protein BDGL_001212 SM00822 BDGL_001212 BDGL_001213 SM00822 BDGL_001213 BDGL_001220 SM00346 helix_turn_helix isocitrate lyase regulation BDGL_001222 SM00344 helix_turn_helix ASNC type BDGL_001224 SM00671 Sel1-like repeats. BDGL_001242 SM01400 BDGL_001242 BDGL_001244 SM00342 helix_turn_helix, arabinose operon control protein BDGL_001246 SM00382 ATPases associated with a variety of cellular activities BDGL_001268 SM00912 haemagglutination activity domain BDGL_001278 SM00346 helix_turn_helix isocitrate lyase regulation BDGL_001298 SM00822 BDGL_001298 BDGL_001308 SM00422 helix_turn_helix, mercury resistance BDGL_001313 SM00829 Enoylreductase BDGL_001320 SM00345 helix_turn_helix gluconate operon transcriptional repressor BDGL_001320 SM00895 BDGL_001320 BDGL_001323 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BDGL_001326 SM00882 Coenzyme A transferase BDGL_001327 SM00882 Coenzyme A transferase BDGL_001335 SM00342 helix_turn_helix, arabinose operon control protein BDGL_001336 SM00903 Flavin reductase like domain BDGL_001345 SM00347 helix_turn_helix multiple antibiotic resistance protein BDGL_001349 SM00855 Phosphoglycerate mutase family BDGL_001353 SM00346 helix_turn_helix isocitrate lyase regulation BDGL_001359 SM00564 beta-propeller repeat BDGL_001361 SM00710 Parallel beta-helix repeats BDGL_001368 SM00998 Adenylosuccinate lyase C-terminus BDGL_001370 SM00882 Coenzyme A transferase BDGL_001371 SM00882 Coenzyme A transferase BDGL_001377 SM01192 BDGL_001377 BDGL_001377 SM01193 BDGL_001377 BDGL_001390 SM00382 ATPases associated with a variety of cellular activities BDGL_001390 SM01086 C-terminal, D2-small domain, of ClpB protein BDGL_001393 SM00859 Semialdehyde dehydrogenase, NAD binding domain BDGL_001401 SM01264 BDGL_001401 BDGL_001410 SM00382 ATPases associated with a variety of cellular activities BDGL_001410 SM00962 SRP54-type protein, GTPase domain BDGL_001410 SM00963 SRP54-type protein, helical bundle domain BDGL_001415 SM00116 Domain in cystathionine beta-synthase and other proteins. BDGL_001428 SM00347 helix_turn_helix multiple antibiotic resistance protein BDGL_001430 SM00052 Putative diguanylate phosphodiesterase BDGL_001430 SM00091 PAS domain BDGL_001430 SM00267 diguanylate cyclase BDGL_001439 SM00344 helix_turn_helix ASNC type BDGL_001443 SM00363 S4 RNA-binding domain BDGL_001444 SM00382 ATPases associated with a variety of cellular activities BDGL_001451 SM00935 Outer membrane protein (OmpH-like) BDGL_001454 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BDGL_001460 SM00729 Elongator protein 3, MiaB family, Radical SAM BDGL_001462 SM00091 PAS domain BDGL_001462 SM00387 Histidine kinase-like ATPases BDGL_001462 SM00388 His Kinase A (phosphoacceptor) domain BDGL_001463 SM00382 ATPases associated with a variety of cellular activities BDGL_001463 SM00448 cheY-homologous receiver domain BDGL_001471 SM01034 Sensors of blue-light using FAD BDGL_001482 SM00345 helix_turn_helix gluconate operon transcriptional repressor BDGL_001484 SM00852 Probable molybdopterin binding domain BDGL_001485 SM00852 Probable molybdopterin binding domain BDGL_001488 SM00729 Elongator protein 3, MiaB family, Radical SAM BDGL_001489 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BDGL_001491 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BDGL_001494 SM00448 cheY-homologous receiver domain BDGL_001494 SM01012 BDGL_001494 BDGL_001507 SM00878 Biotin carboxylase C-terminal domain BDGL_001510 SM00972 Spore Coat Protein U domain BDGL_001513 SM00972 Spore Coat Protein U domain BDGL_001520 SM00226 Low molecular weight phosphatase family BDGL_001527 SM00382 ATPases associated with a variety of cellular activities BDGL_001534 SM00822 BDGL_001534 BDGL_001540 SM00344 helix_turn_helix ASNC type BDGL_001546 SM00382 ATPases associated with a variety of cellular activities BDGL_001566 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. BDGL_001569 SM00830 Chorismate mutase type II BDGL_001573 SM00972 Spore Coat Protein U domain BDGL_001577 SM00972 Spore Coat Protein U domain BDGL_001583 SM00382 ATPases associated with a variety of cellular activities BDGL_001586 SM00862 Transcriptional regulatory protein, C terminal BDGL_001601 SM00853 MutL C terminal dimerisation domain BDGL_001601 SM01340 BDGL_001601 BDGL_001606 SM00363 S4 RNA-binding domain BDGL_001623 SM01230 BDGL_001623 BDGL_001624 SM00448 cheY-homologous receiver domain BDGL_001624 SM00862 Transcriptional regulatory protein, C terminal BDGL_001625 SM00387 Histidine kinase-like ATPases BDGL_001625 SM00388 His Kinase A (phosphoacceptor) domain BDGL_001630 SM00905 Dihydroneopterin aldolase BDGL_001633 SM00903 Flavin reductase like domain BDGL_001635 SM00822 BDGL_001635 BDGL_001636 SM00342 helix_turn_helix, arabinose operon control protein BDGL_001637 SM00062 Bacterial periplasmic substrate-binding proteins BDGL_001640 SM00937 BDGL_001640 BDGL_001663 SM01005 Alanine racemase, C-terminal domain BDGL_001665 SM00460 Transglutaminase/protease-like homologues BDGL_001670 SM01228 BDGL_001670 BDGL_001675 SM00798 AICARFT/IMPCHase bienzyme BDGL_001675 SM00851 MGS-like domain BDGL_001676 SM01209 BDGL_001676 BDGL_001676 SM01210 BDGL_001676 BDGL_001678 SM00382 ATPases associated with a variety of cellular activities BDGL_001678 SM00930 BDGL_001678 BDGL_001680 SM00849 Metallo-beta-lactamase superfamily BDGL_001692 SM00342 helix_turn_helix, arabinose operon control protein BDGL_001699 SM00829 Enoylreductase BDGL_001703 SM00448 cheY-homologous receiver domain BDGL_001703 SM00862 Transcriptional regulatory protein, C terminal BDGL_001704 SM00388 His Kinase A (phosphoacceptor) domain BDGL_001713 SM00387 Histidine kinase-like ATPases BDGL_001713 SM00388 His Kinase A (phosphoacceptor) domain BDGL_001714 SM00448 cheY-homologous receiver domain BDGL_001714 SM00862 Transcriptional regulatory protein, C terminal BDGL_001716 SM00095 Transthyretin BDGL_001731 SM01034 Sensors of blue-light using FAD BDGL_001732 SM00357 Cold shock protein domain BDGL_001749 SM00855 Phosphoglycerate mutase family BDGL_001753 SM00487 DEAD-like helicases superfamily BDGL_001753 SM00490 helicase superfamily c-terminal domain BDGL_001754 SM00357 Cold shock protein domain BDGL_001768 SM00830 Chorismate mutase type II BDGL_001780 SM00387 Histidine kinase-like ATPases BDGL_001780 SM00388 His Kinase A (phosphoacceptor) domain BDGL_001781 SM00448 cheY-homologous receiver domain BDGL_001781 SM00862 Transcriptional regulatory protein, C terminal BDGL_001788 SM00345 helix_turn_helix gluconate operon transcriptional repressor BDGL_001792 SM00382 ATPases associated with a variety of cellular activities BDGL_001795 SM00062 Bacterial periplasmic substrate-binding proteins BDGL_001803 SM00479 BDGL_001803 BDGL_001805 SM00382 ATPases associated with a variety of cellular activities BDGL_001814 SM00342 helix_turn_helix, arabinose operon control protein BDGL_001823 SM00729 Elongator protein 3, MiaB family, Radical SAM BDGL_001827 SM00996 S-adenosyl-L-homocysteine hydrolase BDGL_001827 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BDGL_001830 SM00052 Putative diguanylate phosphodiesterase BDGL_001830 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BDGL_001830 SM00091 PAS domain BDGL_001830 SM00267 diguanylate cyclase BDGL_001831 SM00919 Malic enzyme, NAD binding domain BDGL_001831 SM01274 BDGL_001831 BDGL_001833 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BDGL_001841 SM01230 BDGL_001841 BDGL_001849 SM00463 Small MutS-related domain BDGL_001851 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BDGL_001852 SM01092 CO dehydrogenase flavoprotein C-terminal domain BDGL_001863 SM00382 ATPases associated with a variety of cellular activities BDGL_001864 SM00382 ATPases associated with a variety of cellular activities BDGL_001874 SM00382 ATPases associated with a variety of cellular activities BDGL_001890 SM00841 Elongation factor P, C-terminal BDGL_001890 SM01185 BDGL_001890 BDGL_001894 SM00052 Putative diguanylate phosphodiesterase BDGL_001901 SM00257 Lysin motif BDGL_001905 SM00936 Penicillin-binding protein 5, C-terminal domain BDGL_001914 SM00382 ATPases associated with a variety of cellular activities BDGL_001920 SM00344 helix_turn_helix ASNC type BDGL_001929 SM00487 DEAD-like helicases superfamily BDGL_001929 SM00490 helicase superfamily c-terminal domain BDGL_001936 SM00880 BDGL_001936 BDGL_001936 SM01118 BDGL_001936 BDGL_001946 SM01329 BDGL_001946 BDGL_001951 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BDGL_001967 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BDGL_001971 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BDGL_001974 SM00487 DEAD-like helicases superfamily BDGL_001974 SM00490 helicase superfamily c-terminal domain BDGL_001976 SM00267 diguanylate cyclase BDGL_001989 SM00358 Double-stranded RNA binding motif BDGL_001989 SM00535 Ribonuclease III family BDGL_001992 SM00838 Elongation factor G C-terminus BDGL_001994 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BDGL_002004 SM00382 ATPases associated with a variety of cellular activities BDGL_002019 SM01211 BDGL_002019 BDGL_002020 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BDGL_002021 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BDGL_002022 SM00382 ATPases associated with a variety of cellular activities BDGL_002047 SM00849 Metallo-beta-lactamase superfamily BDGL_002048 SM00382 ATPases associated with a variety of cellular activities BDGL_002058 SM00434 DNA Topoisomerase IV BDGL_002060 SM00893 Electron transfer flavoprotein domain BDGL_002061 SM00893 Electron transfer flavoprotein domain BDGL_002070 SM00382 ATPases associated with a variety of cellular activities BDGL_002071 SM00978 BDGL_002071 BDGL_002103 SM00849 Metallo-beta-lactamase superfamily BDGL_002106 SM00883 Chaperonin 10 Kd subunit BDGL_002110 SM00046 Diacylglycerol kinase catalytic domain (presumed) BDGL_002122 SM00382 ATPases associated with a variety of cellular activities BDGL_002124 SM01103 BDGL_002124 BDGL_002128 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BDGL_002129 SM00851 MGS-like domain BDGL_002129 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BDGL_002138 SM00854 Bacterial capsule synthesis protein PGA_cap BDGL_002145 SM00881 CoA binding domain BDGL_002149 SM00861 Transketolase, pyrimidine binding domain BDGL_002159 SM00450 Rhodanese Homology Domain BDGL_002172 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. BDGL_002183 SM00014 Acid phosphatase homologues BDGL_002191 SM00822 BDGL_002191 BDGL_002202 SM00387 Histidine kinase-like ATPases BDGL_002202 SM00388 His Kinase A (phosphoacceptor) domain BDGL_002203 SM00448 cheY-homologous receiver domain BDGL_002203 SM00862 Transcriptional regulatory protein, C terminal BDGL_002208 SM00563 Phosphate acyltransferases BDGL_002211 SM00244 prohibitin homologues BDGL_002218 SM00829 Enoylreductase BDGL_002219 SM00342 helix_turn_helix, arabinose operon control protein BDGL_002223 SM00342 helix_turn_helix, arabinose operon control protein BDGL_002230 SM00316 Ribosomal protein S1-like RNA-binding domain BDGL_002239 SM00845 GatB domain BDGL_002263 SM00073 Histidine Phosphotransfer domain BDGL_002263 SM00260 Two component signalling adaptor domain BDGL_002263 SM00387 Histidine kinase-like ATPases BDGL_002263 SM00448 cheY-homologous receiver domain BDGL_002263 SM01231 BDGL_002263 BDGL_002264 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BDGL_002265 SM00260 Two component signalling adaptor domain BDGL_002266 SM00448 cheY-homologous receiver domain BDGL_002267 SM00448 cheY-homologous receiver domain BDGL_002280 SM00903 Flavin reductase like domain BDGL_002287 SM00671 Sel1-like repeats. BDGL_002292 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BDGL_002292 SM01232 BDGL_002292 BDGL_002297 SM00838 Elongation factor G C-terminus BDGL_002309 SM00564 beta-propeller repeat BDGL_002312 SM00342 helix_turn_helix, arabinose operon control protein BDGL_002323 SM00957 SecA DEAD-like domain BDGL_002323 SM00958 SecA preprotein cross-linking domain BDGL_002325 SM00849 Metallo-beta-lactamase superfamily BDGL_002331 SM00342 helix_turn_helix, arabinose operon control protein BDGL_002344 SM00448 cheY-homologous receiver domain BDGL_002344 SM00862 Transcriptional regulatory protein, C terminal BDGL_002345 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BDGL_002345 SM00387 Histidine kinase-like ATPases BDGL_002345 SM00388 His Kinase A (phosphoacceptor) domain BDGL_002371 SM00387 Histidine kinase-like ATPases BDGL_002371 SM00388 His Kinase A (phosphoacceptor) domain BDGL_002374 SM01323 BDGL_002374 BDGL_002380 SM00481 DNA polymerase alpha chain like domain BDGL_002385 SM00450 Rhodanese Homology Domain BDGL_002400 SM00849 Metallo-beta-lactamase superfamily BDGL_002406 SM00235 Zinc-dependent metalloprotease BDGL_002411 SM01001 AIR carboxylase BDGL_002430 SM00382 ATPases associated with a variety of cellular activities BDGL_002430 SM00760 Bacterial dnaA protein helix-turn-helix domain BDGL_002432 SM00480 DNA polymerase III beta subunit BDGL_002434 SM00387 Histidine kinase-like ATPases BDGL_002434 SM00433 TopoisomeraseII BDGL_002437 SM00382 ATPases associated with a variety of cellular activities BDGL_002447 SM00267 diguanylate cyclase BDGL_002450 SM00155 Phospholipase D. Active site motifs. BDGL_002451 SM00563 Phosphate acyltransferases BDGL_002458 SM00650 Ribosomal RNA adenine dimethylases BDGL_002469 SM00878 Biotin carboxylase C-terminal domain BDGL_002482 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. BDGL_002488 SM00729 Elongator protein 3, MiaB family, Radical SAM BDGL_002504 SM00316 Ribosomal protein S1-like RNA-binding domain BDGL_002504 SM00955 BDGL_002504 BDGL_002516 SM00662 RNA polymerases D BDGL_002517 SM00363 S4 RNA-binding domain BDGL_002517 SM01390 BDGL_002517 BDGL_002530 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BDGL_002531 SM01374 BDGL_002531 BDGL_002535 SM00322 K homology RNA-binding domain BDGL_002538 SM01382 BDGL_002538 BDGL_002538 SM01383 BDGL_002538 BDGL_002542 SM01403 BDGL_002542 BDGL_002553 SM00563 Phosphate acyltransferases BDGL_002556 SM00487 DEAD-like helicases superfamily BDGL_002556 SM00490 helicase superfamily c-terminal domain BDGL_002565 SM00382 ATPases associated with a variety of cellular activities BDGL_002567 SM00487 DEAD-like helicases superfamily BDGL_002567 SM00490 helicase superfamily c-terminal domain BDGL_002569 SM00861 Transketolase, pyrimidine binding domain BDGL_002577 SM00116 Domain in cystathionine beta-synthase and other proteins. BDGL_002598 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BDGL_002637 SM00072 Guanylate kinase homologues. BDGL_002638 SM01409 BDGL_002638 BDGL_002640 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BDGL_002640 SM00954 Region found in RelA / SpoT proteins BDGL_002657 SM00965 Secretin and TonB N terminus short domain BDGL_002687 SM00671 Sel1-like repeats. BDGL_002688 SM00382 ATPases associated with a variety of cellular activities BDGL_002691 SM00947 Carbonic anhydrase BDGL_002692 SM00316 Ribosomal protein S1-like RNA-binding domain BDGL_002692 SM00732 Likely ribonuclease with RNase H fold. BDGL_002693 SM00448 cheY-homologous receiver domain BDGL_002693 SM00862 Transcriptional regulatory protein, C terminal BDGL_002694 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BDGL_002694 SM00387 Histidine kinase-like ATPases BDGL_002694 SM00388 His Kinase A (phosphoacceptor) domain BDGL_002702 SM00474 3'-5' exonuclease BDGL_002704 SM00382 ATPases associated with a variety of cellular activities BDGL_002705 SM00530 Helix-turn-helix XRE-family like proteins BDGL_002708 SM00357 Cold shock protein domain BDGL_002712 SM00342 helix_turn_helix, arabinose operon control protein BDGL_002717 SM00477 DNA/RNA non-specific endonuclease BDGL_002717 SM00892 DNA/RNA non-specific endonuclease BDGL_002728 SM00342 helix_turn_helix, arabinose operon control protein BDGL_002745 SM00345 helix_turn_helix gluconate operon transcriptional repressor BDGL_002748 SM00530 Helix-turn-helix XRE-family like proteins BDGL_002755 SM00422 helix_turn_helix, mercury resistance BDGL_002759 SM00829 Enoylreductase BDGL_002762 SM00267 diguanylate cyclase BDGL_002768 SM00387 Histidine kinase-like ATPases BDGL_002768 SM00388 His Kinase A (phosphoacceptor) domain BDGL_002768 SM00448 cheY-homologous receiver domain BDGL_002770 SM00421 helix_turn_helix, Lux Regulon BDGL_002770 SM00448 cheY-homologous receiver domain BDGL_002773 SM00344 helix_turn_helix ASNC type BDGL_002782 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BDGL_002783 SM00937 BDGL_002783 BDGL_002788 SM00116 Domain in cystathionine beta-synthase and other proteins. BDGL_002788 SM01240 BDGL_002788 BDGL_002789 SM00849 Metallo-beta-lactamase superfamily BDGL_002798 SM00864 Tubulin/FtsZ family, GTPase domain BDGL_002798 SM00865 Tubulin/FtsZ family, C-terminal domain BDGL_002799 SM00842 Cell division protein FtsA BDGL_002808 SM00342 helix_turn_helix, arabinose operon control protein BDGL_002814 SM00267 diguanylate cyclase BDGL_002821 SM00095 Transthyretin BDGL_002827 SM00387 Histidine kinase-like ATPases BDGL_002827 SM00433 TopoisomeraseII BDGL_002845 SM00448 cheY-homologous receiver domain BDGL_002845 SM00862 Transcriptional regulatory protein, C terminal BDGL_002846 SM00387 Histidine kinase-like ATPases BDGL_002846 SM00388 His Kinase A (phosphoacceptor) domain BDGL_002852 SM00450 Rhodanese Homology Domain BDGL_002877 SM00345 helix_turn_helix gluconate operon transcriptional repressor BDGL_002877 SM00866 BDGL_002877 BDGL_002879 SM00833 Cobalamin synthesis protein cobW C-terminal domain BDGL_002885 SM00346 helix_turn_helix isocitrate lyase regulation BDGL_002891 SM01130 BDGL_002891 BDGL_002896 SM00382 ATPases associated with a variety of cellular activities BDGL_002902 SM00478 endonuclease III BDGL_002902 SM00525 BDGL_002902 BDGL_002906 SM00829 Enoylreductase BDGL_002907 SM00345 helix_turn_helix gluconate operon transcriptional repressor BDGL_002917 SM00271 DnaJ molecular chaperone homology domain BDGL_002934 SM00248 ankyrin repeats BDGL_002939 SM00904 Riboflavin kinase BDGL_002943 SM00382 ATPases associated with a variety of cellular activities BDGL_002946 SM00062 Bacterial periplasmic substrate-binding proteins BDGL_002947 SM00062 Bacterial periplasmic substrate-binding proteins BDGL_002964 SM00644 BDGL_002964 BDGL_002969 SM00226 Low molecular weight phosphatase family BDGL_002971 SM00984 UDP binding domain BDGL_002985 SM00984 UDP binding domain BDGL_002992 SM00345 helix_turn_helix gluconate operon transcriptional repressor BDGL_002992 SM00895 BDGL_002992 BDGL_002997 SM00345 helix_turn_helix gluconate operon transcriptional repressor BDGL_002997 SM00895 BDGL_002997 BDGL_003004 SM00671 Sel1-like repeats. BDGL_003021 SM00344 helix_turn_helix ASNC type BDGL_003023 SM01005 Alanine racemase, C-terminal domain BDGL_003038 SM00421 helix_turn_helix, Lux Regulon BDGL_003041 SM00823 Phosphopantetheine attachment site BDGL_003041 SM01294 BDGL_003041 BDGL_003042 SM00823 Phosphopantetheine attachment site BDGL_003042 SM00824 Thioesterase BDGL_003063 SM00836 DALR anticodon binding domain BDGL_003063 SM01016 Arginyl tRNA synthetase N terminal dom BDGL_003064 SM00919 Malic enzyme, NAD binding domain BDGL_003064 SM01274 BDGL_003064 BDGL_003068 SM00382 ATPases associated with a variety of cellular activities BDGL_003078 SM00382 ATPases associated with a variety of cellular activities BDGL_003082 SM00342 helix_turn_helix, arabinose operon control protein BDGL_003099 SM00422 helix_turn_helix, mercury resistance BDGL_003101 SM00729 Elongator protein 3, MiaB family, Radical SAM BDGL_003106 SM00387 Histidine kinase-like ATPases BDGL_003106 SM00388 His Kinase A (phosphoacceptor) domain BDGL_003107 SM00448 cheY-homologous receiver domain BDGL_003107 SM00862 Transcriptional regulatory protein, C terminal BDGL_003110 SM00641 Glycosyl hydrolases family 25 BDGL_003113 SM01091 Transporter associated domain BDGL_003117 SM00434 DNA Topoisomerase IV BDGL_003125 SM01130 BDGL_003125 BDGL_003126 SM01007 Class II Aldolase and Adducin N-terminal domain BDGL_003127 SM00345 helix_turn_helix gluconate operon transcriptional repressor BDGL_003129 SM00382 ATPases associated with a variety of cellular activities BDGL_003131 SM00938 Nitrogen regulatory protein P-II BDGL_003144 SM00245 tail specific protease BDGL_003145 SM00382 ATPases associated with a variety of cellular activities BDGL_003145 SM00448 cheY-homologous receiver domain BDGL_003146 SM00387 Histidine kinase-like ATPases BDGL_003146 SM00388 His Kinase A (phosphoacceptor) domain BDGL_003147 SM00421 helix_turn_helix, Lux Regulon BDGL_003147 SM00448 cheY-homologous receiver domain BDGL_003153 SM00899 BDGL_003153 BDGL_003172 SM00448 cheY-homologous receiver domain BDGL_003172 SM00850 LytTr DNA-binding domain BDGL_003178 SM00528 Domain in histone-like proteins of HNS family BDGL_003180 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BDGL_003182 SM00240 Forkhead associated domain BDGL_003187 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BDGL_003187 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BDGL_003188 SM00649 Ribosomal protein L11/L12 BDGL_003194 SM00663 RNA polymerase I subunit A N-terminus BDGL_003202 SM00387 Histidine kinase-like ATPases BDGL_003207 SM00422 helix_turn_helix, mercury resistance BDGL_003218 SM00465 GIY-YIG type nucleases (URI domain) BDGL_003222 SM00342 helix_turn_helix, arabinose operon control protein BDGL_003224 SM00346 helix_turn_helix isocitrate lyase regulation BDGL_003229 SM00732 Likely ribonuclease with RNase H fold. BDGL_003232 SM00028 Tetratricopeptide repeats BDGL_003234 SM00967 RNA 2'-O ribose methyltransferase substrate binding BDGL_003244 SM00316 Ribosomal protein S1-like RNA-binding domain BDGL_003268 SM00382 ATPases associated with a variety of cellular activities BDGL_003270 SM01387 BDGL_003270 BDGL_003271 SM00316 Ribosomal protein S1-like RNA-binding domain BDGL_003271 SM00322 K homology RNA-binding domain BDGL_003274 SM00271 DnaJ molecular chaperone homology domain BDGL_003278 SM00487 DEAD-like helicases superfamily BDGL_003278 SM00490 helicase superfamily c-terminal domain BDGL_003284 SM00116 Domain in cystathionine beta-synthase and other proteins. BDGL_003284 SM01091 Transporter associated domain BDGL_003292 SM00849 Metallo-beta-lactamase superfamily BDGL_003306 SM00729 Elongator protein 3, MiaB family, Radical SAM BDGL_003310 SM00316 Ribosomal protein S1-like RNA-binding domain BDGL_003311 SM00363 S4 RNA-binding domain BDGL_003320 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BDGL_003330 SM01329 BDGL_003330 BDGL_003333 SM00316 Ribosomal protein S1-like RNA-binding domain BDGL_003334 SM00342 helix_turn_helix, arabinose operon control protein BDGL_003336 SM00870 BDGL_003336 BDGL_003339 SM00859 Semialdehyde dehydrogenase, NAD binding domain BDGL_003345 SM00382 ATPases associated with a variety of cellular activities BDGL_003347 SM00829 Enoylreductase BDGL_003350 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BDGL_003350 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BDGL_003350 SM00493 BDGL_003350 BDGL_003354 SM00360 RNA recognition motif BDGL_003382 SM00671 Sel1-like repeats. BDGL_003385 SM00917 LeuA allosteric (dimerisation) domain BDGL_003386 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. BDGL_003390 SM00382 ATPases associated with a variety of cellular activities BDGL_003390 SM00994 ClpX C4-type zinc finger BDGL_003390 SM01086 C-terminal, D2-small domain, of ClpB protein BDGL_003406 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BDGL_003406 SM00245 tail specific protease BDGL_003408 SM00014 Acid phosphatase homologues BDGL_003410 SM00562 BDGL_003410 BDGL_003411 SM00729 Elongator protein 3, MiaB family, Radical SAM BDGL_003412 SM00028 Tetratricopeptide repeats BDGL_003418 SM00564 beta-propeller repeat BDGL_003421 SM00563 Phosphate acyltransferases BDGL_003434 SM00825 Beta-ketoacyl synthase BDGL_003436 SM00822 BDGL_003436 BDGL_003437 SM00825 Beta-ketoacyl synthase BDGL_003442 SM00450 Rhodanese Homology Domain BDGL_003444 SM00479 BDGL_003444 BDGL_003448 SM00382 ATPases associated with a variety of cellular activities BDGL_003456 SM00052 Putative diguanylate phosphodiesterase BDGL_003456 SM00267 diguanylate cyclase BDGL_003458 SM01236 BDGL_003458 BDGL_003473 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BDGL_003473 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BDGL_003482 SM00073 Histidine Phosphotransfer domain BDGL_003482 SM00387 Histidine kinase-like ATPases BDGL_003482 SM00388 His Kinase A (phosphoacceptor) domain BDGL_003482 SM00448 cheY-homologous receiver domain BDGL_003486 SM00954 Region found in RelA / SpoT proteins BDGL_003489 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BDGL_003498 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BDGL_003508 SM00873 B3/4 domain BDGL_003508 SM00874 tRNA synthetase B5 domain BDGL_003508 SM00896 Ferredoxin-fold anticodon binding domain BDGL_003509 SM00411 bacterial (prokaryotic) histone like domain BDGL_003512 SM00357 Cold shock protein domain BDGL_003512 SM00382 ATPases associated with a variety of cellular activities BDGL_003512 SM00959 Rho termination factor, N-terminal domain BDGL_003516 SM00977 TilS substrate C-terminal domain BDGL_003519 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BDGL_003519 SM00474 3'-5' exonuclease BDGL_003519 SM00475 5'-3' exonuclease BDGL_003519 SM00482 DNA polymerase A domain BDGL_003523 SM00382 ATPases associated with a variety of cellular activities BDGL_003525 SM00347 helix_turn_helix multiple antibiotic resistance protein BDGL_003529 SM00331 Sigma factor PP2C-like phosphatases BDGL_003585 SM00342 helix_turn_helix, arabinose operon control protein BDGL_003591 SM00903 Flavin reductase like domain BDGL_003597 SM00382 ATPases associated with a variety of cellular activities