locus-tag class description ACRAD_RS00005 PF11638 DnaA N-terminal domain ACRAD_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix ACRAD_RS00005 PF00308 Bacterial dnaA protein ACRAD_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain ACRAD_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain ACRAD_RS00010 PF02767 DNA polymerase III beta subunit, central domain ACRAD_RS00015 PF02463 RecF/RecN/SMC N terminal domain ACRAD_RS00020 PF18053 DNA gyrase B subunit insert domain ACRAD_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACRAD_RS00020 PF01751 Toprim domain ACRAD_RS00020 PF00204 DNA gyrase B ACRAD_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus ACRAD_RS00025 PF08240 Alcohol dehydrogenase GroES-like domain ACRAD_RS00025 PF13823 Alcohol dehydrogenase GroES-associated ACRAD_RS00025 PF00107 Zinc-binding dehydrogenase ACRAD_RS00035 PF12848 ABC transporter ACRAD_RS00035 PF00005 ABC transporter ACRAD_RS00055 PF01521 Iron-sulphur cluster biosynthesis ACRAD_RS00060 PF00561 alpha/beta hydrolase fold ACRAD_RS00065 PF03702 Anhydro-N-acetylmuramic acid kinase ACRAD_RS00070 PF00579 tRNA synthetases class I (W and Y) ACRAD_RS00085 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ACRAD_RS00090 PF01252 Signal peptidase (SPase) II ACRAD_RS00095 PF08264 Anticodon-binding domain of tRNA ACRAD_RS00095 PF00133 tRNA synthetases class I (I, L, M and V) ACRAD_RS00095 PF06827 Zinc finger found in FPG and IleRS ACRAD_RS00100 PF06574 FAD synthetase ACRAD_RS00100 PF01687 Riboflavin kinase ACRAD_RS00120 PF00005 ABC transporter ACRAD_RS00125 PF00528 Binding-protein-dependent transport system inner membrane component ACRAD_RS00130 PF00296 Luciferase-like monooxygenase ACRAD_RS00135 PF09084 NMT1/THI5 like ACRAD_RS00140 PF09084 NMT1/THI5 like ACRAD_RS00145 PF00583 Acetyltransferase (GNAT) family ACRAD_RS00145 PF00696 Amino acid kinase family ACRAD_RS00160 PF00106 short chain dehydrogenase ACRAD_RS00165 PF13419 Haloacid dehalogenase-like hydrolase ACRAD_RS00175 PF01323 DSBA-like thioredoxin domain ACRAD_RS00180 PF00440 Bacterial regulatory proteins, tetR family ACRAD_RS00185 PF00440 Bacterial regulatory proteins, tetR family ACRAD_RS00190 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B ACRAD_RS00195 PF00487 Fatty acid desaturase ACRAD_RS00200 PF03725 3' exoribonuclease family, domain 2 ACRAD_RS00200 PF01138 3' exoribonuclease family, domain 1 ACRAD_RS00205 PF05506 Domain of unknown function (DUF756) ACRAD_RS00205 PF04185 Phosphoesterase family ACRAD_RS00210 PF04185 Phosphoesterase family ACRAD_RS00210 PF05506 Domain of unknown function (DUF756) ACRAD_RS00215 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ACRAD_RS00215 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ACRAD_RS00220 PF01510 N-acetylmuramoyl-L-alanine amidase ACRAD_RS00225 PF03023 Lipid II flippase MurJ ACRAD_RS00240 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ACRAD_RS00240 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ACRAD_RS00245 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ACRAD_RS00245 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ACRAD_RS00250 PF02706 Chain length determinant protein ACRAD_RS00250 PF13807 G-rich domain on putative tyrosine kinase ACRAD_RS00250 PF13614 AAA domain ACRAD_RS00255 PF01451 Low molecular weight phosphotyrosine protein phosphatase ACRAD_RS00260 PF02563 Polysaccharide biosynthesis/export protein ACRAD_RS00260 PF18412 Outer-membrane lipoprotein Wza C-terminal domain ACRAD_RS00260 PF10531 SLBB domain ACRAD_RS00265 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ACRAD_RS00265 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ACRAD_RS00265 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ACRAD_RS00270 PF01370 NAD dependent epimerase/dehydratase family ACRAD_RS00295 PF00534 Glycosyl transferases group 1 ACRAD_RS00295 PF13477 Glycosyl transferase 4-like ACRAD_RS00300 PF02397 Bacterial sugar transferase ACRAD_RS00305 PF14602 Hexapeptide repeat of succinyl-transferase ACRAD_RS00305 PF17836 PglD N-terminal domain ACRAD_RS00305 PF00132 Bacterial transferase hexapeptide (six repeats) ACRAD_RS00310 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ACRAD_RS00315 PF02719 Polysaccharide biosynthesis protein ACRAD_RS00320 PF00483 Nucleotidyl transferase ACRAD_RS00325 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ACRAD_RS00325 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ACRAD_RS00325 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ACRAD_RS00330 PF00342 Phosphoglucose isomerase ACRAD_RS00335 PF16363 GDP-mannose 4,6 dehydratase ACRAD_RS00340 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ACRAD_RS00340 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ACRAD_RS00340 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ACRAD_RS00340 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ACRAD_RS00360 PF06100 MCRA family ACRAD_RS00365 PF00872 Transposase, Mutator family ACRAD_RS00385 PF02896 PEP-utilising enzyme, TIM barrel domain ACRAD_RS00385 PF00391 PEP-utilising enzyme, mobile domain ACRAD_RS00385 PF05524 PEP-utilising enzyme, N-terminal ACRAD_RS00385 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ACRAD_RS00385 PF00381 PTS HPr component phosphorylation site ACRAD_RS00390 PF00294 pfkB family carbohydrate kinase ACRAD_RS00395 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ACRAD_RS00395 PF02378 Phosphotransferase system, EIIC ACRAD_RS00405 PF00271 Helicase conserved C-terminal domain ACRAD_RS00405 PF12419 SNF2 Helicase protein ACRAD_RS00405 PF00176 SNF2 family N-terminal domain ACRAD_RS00410 PF07804 HipA-like C-terminal domain ACRAD_RS00410 PF13657 HipA N-terminal domain ACRAD_RS00435 PF00884 Sulfatase ACRAD_RS00435 PF08019 Phosphoethanolamine transferase EptA/EptB ACRAD_RS00440 PF00072 Response regulator receiver domain ACRAD_RS00440 PF00486 Transcriptional regulatory protein, C terminal ACRAD_RS00445 PF08521 Two-component sensor kinase N-terminal ACRAD_RS00445 PF00512 His Kinase A (phospho-acceptor) domain ACRAD_RS00445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACRAD_RS00455 PF01219 Prokaryotic diacylglycerol kinase ACRAD_RS00480 PF01722 BolA-like protein ACRAD_RS00495 PF09335 SNARE associated Golgi protein ACRAD_RS00500 PF02540 NAD synthase ACRAD_RS00500 PF00958 GMP synthase C terminal domain ACRAD_RS00500 PF00117 Glutamine amidotransferase class-I ACRAD_RS00505 PF02678 Pirin ACRAD_RS00505 PF05726 Pirin C-terminal cupin domain ACRAD_RS00510 PF00043 Glutathione S-transferase, C-terminal domain ACRAD_RS00510 PF02798 Glutathione S-transferase, N-terminal domain ACRAD_RS00520 PF00750 tRNA synthetases class I (R) ACRAD_RS00520 PF03485 Arginyl tRNA synthetase N terminal domain ACRAD_RS00520 PF05746 DALR anticodon binding domain ACRAD_RS00530 PF03949 Malic enzyme, NAD binding domain ACRAD_RS00530 PF00390 Malic enzyme, N-terminal domain ACRAD_RS00535 PF04717 Type VI secretion system, phage-baseplate injector ACRAD_RS00535 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) ACRAD_RS00535 PF13296 Putative type VI secretion system Rhs element Vgr ACRAD_RS00535 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) ACRAD_RS00535 PF04717 Type VI secretion system, phage-baseplate injector ACRAD_RS00535 PF13296 Putative type VI secretion system Rhs element Vgr ACRAD_RS00540 PF00877 NlpC/P60 family ACRAD_RS00540 PF01476 LysM domain ACRAD_RS00565 PF13737 Transposase DDE domain ACRAD_RS00600 PF04261 Dyp-type peroxidase family ACRAD_RS00605 PF00950 ABC 3 transport family ACRAD_RS00610 PF00005 ABC transporter ACRAD_RS00630 PF00119 ATP synthase A chain ACRAD_RS00635 PF00137 ATP synthase subunit C ACRAD_RS00640 PF00430 ATP synthase B/B' CF(0) ACRAD_RS00645 PF00213 ATP synthase delta (OSCP) subunit ACRAD_RS00650 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ACRAD_RS00650 PF00306 ATP synthase alpha/beta chain, C terminal domain ACRAD_RS00650 PF02874 ATP synthase alpha/beta family, beta-barrel domain ACRAD_RS00655 PF00231 ATP synthase ACRAD_RS00660 PF02874 ATP synthase alpha/beta family, beta-barrel domain ACRAD_RS00660 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ACRAD_RS00665 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ACRAD_RS00670 PF00171 Aldehyde dehydrogenase family ACRAD_RS00685 PF00255 Glutathione peroxidase ACRAD_RS00700 PF00892 EamA-like transporter family ACRAD_RS00705 PF01300 Telomere recombination ACRAD_RS00710 PF02481 DNA recombination-mediator protein A ACRAD_RS00710 PF17782 DprA winged helix domain ACRAD_RS00715 PF01476 LysM domain ACRAD_RS00720 PF01327 Polypeptide deformylase ACRAD_RS00760 PF07690 Major Facilitator Superfamily ACRAD_RS00770 PF07690 Major Facilitator Superfamily ACRAD_RS00775 PF08497 Radical SAM N-terminal ACRAD_RS00775 PF04055 Radical SAM superfamily ACRAD_RS00775 PF11842 Domain of unknown function (DUF3362) ACRAD_RS00790 PF11798 IMS family HHH motif ACRAD_RS00790 PF00817 impB/mucB/samB family ACRAD_RS00790 PF11799 impB/mucB/samB family C-terminal domain ACRAD_RS00795 PF01183 Glycosyl hydrolases family 25 ACRAD_RS00800 PF07690 Major Facilitator Superfamily ACRAD_RS00810 PF03641 Possible lysine decarboxylase ACRAD_RS00815 PF03471 Transporter associated domain ACRAD_RS00815 PF03741 Integral membrane protein TerC family ACRAD_RS00820 PF02810 SEC-C motif ACRAD_RS00825 PF03458 UPF0126 domain ACRAD_RS00830 PF07690 Major Facilitator Superfamily ACRAD_RS00835 PF03989 DNA gyrase C-terminal domain, beta-propeller ACRAD_RS00835 PF00521 DNA gyrase/topoisomerase IV, subunit A ACRAD_RS00840 PF00501 AMP-binding enzyme ACRAD_RS00840 PF13193 AMP-binding enzyme C-terminal domain ACRAD_RS00855 PF00719 Inorganic pyrophosphatase ACRAD_RS00860 PF03573 outer membrane porin, OprD family ACRAD_RS00870 PF13335 Magnesium chelatase, subunit ChlI C-terminal ACRAD_RS00870 PF01078 Magnesium chelatase, subunit ChlI ACRAD_RS00880 PF00543 Nitrogen regulatory protein P-II ACRAD_RS00885 PF00909 Ammonium Transporter Family ACRAD_RS00890 PF03477 ATP cone domain ACRAD_RS00895 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ACRAD_RS00895 PF01872 RibD C-terminal domain ACRAD_RS00905 PF00677 Lumazine binding domain ACRAD_RS00920 PF00883 Cytosol aminopeptidase family, catalytic domain ACRAD_RS00920 PF02789 Cytosol aminopeptidase family, N-terminal domain ACRAD_RS00925 PF03739 Lipopolysaccharide export system permease LptF/LptG ACRAD_RS00930 PF03739 Lipopolysaccharide export system permease LptF/LptG ACRAD_RS00935 PF06415 BPG-independent PGAM N-terminus (iPGM_N) ACRAD_RS00935 PF01676 Metalloenzyme superfamily ACRAD_RS00940 PF01471 Putative peptidoglycan binding domain ACRAD_RS00940 PF03572 Peptidase family S41 ACRAD_RS00940 PF17820 PDZ domain ACRAD_RS00945 PF02954 Bacterial regulatory protein, Fis family ACRAD_RS00945 PF00072 Response regulator receiver domain ACRAD_RS00945 PF00158 Sigma-54 interaction domain ACRAD_RS00950 PF00989 PAS fold ACRAD_RS00950 PF00512 His Kinase A (phospho-acceptor) domain ACRAD_RS00950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACRAD_RS00955 PF00072 Response regulator receiver domain ACRAD_RS00955 PF00196 Bacterial regulatory proteins, luxR family ACRAD_RS00960 PF00768 D-alanyl-D-alanine carboxypeptidase ACRAD_RS00965 PF00291 Pyridoxal-phosphate dependent enzyme ACRAD_RS00970 PF00742 Homoserine dehydrogenase ACRAD_RS00970 PF03447 Homoserine dehydrogenase, NAD binding domain ACRAD_RS00970 PF01842 ACT domain ACRAD_RS00980 PF02899 Phage integrase, N-terminal SAM-like domain ACRAD_RS00980 PF00589 Phage integrase family ACRAD_RS00990 PF07664 Ferrous iron transport protein B C terminus ACRAD_RS00990 PF02421 Ferrous iron transport protein B ACRAD_RS00990 PF07670 Nucleoside recognition ACRAD_RS01000 PF08245 Mur ligase middle domain ACRAD_RS01000 PF02875 Mur ligase family, glutamate ligase domain ACRAD_RS01005 PF01098 Cell cycle protein ACRAD_RS01015 PF00749 tRNA synthetases class I (E and Q), catalytic domain ACRAD_RS01020 PF01258 Prokaryotic dksA/traR C4-type zinc finger ACRAD_RS01025 PF00149 Calcineurin-like phosphoesterase ACRAD_RS01030 PF00293 NUDIX domain ACRAD_RS01035 PF01964 Radical SAM ThiC family ACRAD_RS01035 PF13667 ThiC-associated domain ACRAD_RS01045 PF02321 Outer membrane efflux protein ACRAD_RS01050 PF01895 PhoU domain ACRAD_RS01055 PF04362 Bacterial Fe(2+) trafficking ACRAD_RS01060 PF00206 Lyase ACRAD_RS01060 PF14698 Argininosuccinate lyase C-terminal ACRAD_RS01065 PF07694 5TMR of 5TMR-LYT ACRAD_RS01065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACRAD_RS01065 PF06580 Histidine kinase ACRAD_RS01070 PF04397 LytTr DNA-binding domain ACRAD_RS01070 PF00072 Response regulator receiver domain ACRAD_RS01075 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ACRAD_RS01075 PF03900 Porphobilinogen deaminase, C-terminal domain ACRAD_RS01100 PF00816 H-NS histone family ACRAD_RS01115 PF03958 Bacterial type II/III secretion system short domain ACRAD_RS01115 PF00263 Bacterial type II and III secretion system protein ACRAD_RS01120 PF00498 FHA domain ACRAD_RS01120 PF12401 Protein of unknown function (DUF2662) ACRAD_RS01125 PF13419 Haloacid dehalogenase-like hydrolase ACRAD_RS01130 PF04715 Anthranilate synthase component I, N terminal region ACRAD_RS01130 PF00425 chorismate binding enzyme ACRAD_RS01155 PF03144 Elongation factor Tu domain 2 ACRAD_RS01155 PF00009 Elongation factor Tu GTP binding domain ACRAD_RS01155 PF03143 Elongation factor Tu C-terminal domain ACRAD_RS01165 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ACRAD_RS01170 PF02357 Transcription termination factor nusG ACRAD_RS01170 PF00467 KOW motif ACRAD_RS01175 PF00298 Ribosomal protein L11, RNA binding domain ACRAD_RS01175 PF03946 Ribosomal protein L11, N-terminal domain ACRAD_RS01180 PF00687 Ribosomal protein L1p/L10e family ACRAD_RS01185 PF00466 Ribosomal protein L10 ACRAD_RS01190 PF00542 Ribosomal protein L7/L12 C-terminal domain ACRAD_RS01190 PF16320 Ribosomal protein L7/L12 dimerisation domain ACRAD_RS01195 PF04560 RNA polymerase Rpb2, domain 7 ACRAD_RS01195 PF00562 RNA polymerase Rpb2, domain 6 ACRAD_RS01195 PF04563 RNA polymerase beta subunit ACRAD_RS01195 PF04565 RNA polymerase Rpb2, domain 3 ACRAD_RS01195 PF10385 RNA polymerase beta subunit external 1 domain ACRAD_RS01195 PF04561 RNA polymerase Rpb2, domain 2 ACRAD_RS01200 PF04998 RNA polymerase Rpb1, domain 5 ACRAD_RS01200 PF05000 RNA polymerase Rpb1, domain 4 ACRAD_RS01200 PF00623 RNA polymerase Rpb1, domain 2 ACRAD_RS01200 PF04983 RNA polymerase Rpb1, domain 3 ACRAD_RS01200 PF04997 RNA polymerase Rpb1, domain 1 ACRAD_RS01215 PF03553 Na+/H+ antiporter family ACRAD_RS01215 PF13726 Na+-H+ antiporter family ACRAD_RS01225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACRAD_RS01225 PF00183 Hsp90 protein ACRAD_RS01245 PF01323 DSBA-like thioredoxin domain ACRAD_RS01260 PF00108 Thiolase, N-terminal domain ACRAD_RS01260 PF02803 Thiolase, C-terminal domain ACRAD_RS01265 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ACRAD_RS01265 PF00378 Enoyl-CoA hydratase/isomerase ACRAD_RS01265 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ACRAD_RS01275 PF01541 GIY-YIG catalytic domain ACRAD_RS01275 PF02151 UvrB/uvrC motif ACRAD_RS01275 PF08459 UvrC Helix-hairpin-helix N-terminal ACRAD_RS01285 PF01066 CDP-alcohol phosphatidyltransferase ACRAD_RS01290 PF00664 ABC transporter transmembrane region ACRAD_RS01290 PF00005 ABC transporter ACRAD_RS01315 PF13533 Biotin-lipoyl like ACRAD_RS01320 PF03652 Holliday junction resolvase ACRAD_RS01325 PF02622 Uncharacterized ACR, COG1678 ACRAD_RS01330 PF02463 RecF/RecN/SMC N terminal domain ACRAD_RS01335 PF06865 Pyrimidine/purine nucleoside phosphorylase ACRAD_RS01340 PF00588 SpoU rRNA Methylase family ACRAD_RS01340 PF08032 RNA 2'-O ribose methyltransferase substrate binding ACRAD_RS01345 PF00892 EamA-like transporter family ACRAD_RS01350 PF01121 Dephospho-CoA kinase ACRAD_RS01355 PF06750 Bacterial Peptidase A24 N-terminal domain ACRAD_RS01355 PF01478 Type IV leader peptidase family ACRAD_RS01360 PF00482 Type II secretion system (T2SS), protein F ACRAD_RS01365 PF00437 Type II/IV secretion system protein ACRAD_RS01365 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ACRAD_RS01370 PF00121 Triosephosphate isomerase ACRAD_RS01375 PF03840 Preprotein translocase SecG subunit ACRAD_RS01395 PF02576 RimP N-terminal domain ACRAD_RS01395 PF17384 RimP C-terminal SH3 domain ACRAD_RS01400 PF08529 NusA N-terminal domain ACRAD_RS01400 PF13184 NusA-like KH domain ACRAD_RS01400 PF00575 S1 RNA binding domain ACRAD_RS01405 PF08364 Bacterial translation initiation factor IF-2 associated region ACRAD_RS01405 PF04760 Translation initiation factor IF-2, N-terminal region ACRAD_RS01405 PF11987 Translation-initiation factor 2 ACRAD_RS01405 PF00009 Elongation factor Tu GTP binding domain ACRAD_RS01410 PF02033 Ribosome-binding factor A ACRAD_RS01415 PF03334 Na+/H+ antiporter subunit ACRAD_RS01420 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) ACRAD_RS01425 PF01899 Na+/H+ ion antiporter subunit ACRAD_RS01430 PF00361 Proton-conducting membrane transporter ACRAD_RS01435 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ACRAD_RS01440 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ACRAD_RS01440 PF00361 Proton-conducting membrane transporter ACRAD_RS01440 PF13244 Domain of unknown function (DUF4040) ACRAD_RS01440 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter ACRAD_RS01455 PF01502 Phosphoribosyl-AMP cyclohydrolase ACRAD_RS01460 PF03109 ABC1 family ACRAD_RS01470 PF01209 ubiE/COQ5 methyltransferase family ACRAD_RS01480 PF03976 Polyphosphate kinase 2 (PPK2) ACRAD_RS01490 PF17946 RecC C-terminal domain ACRAD_RS01495 PF12705 PD-(D/E)XK nuclease superfamily ACRAD_RS01495 PF00580 UvrD/REP helicase N-terminal domain ACRAD_RS01495 PF13361 UvrD-like helicase C-terminal domain ACRAD_RS01500 PF13538 UvrD-like helicase C-terminal domain ACRAD_RS01505 PF00312 Ribosomal protein S15 ACRAD_RS01510 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ACRAD_RS01510 PF01138 3' exoribonuclease family, domain 1 ACRAD_RS01510 PF03725 3' exoribonuclease family, domain 2 ACRAD_RS01510 PF00575 S1 RNA binding domain ACRAD_RS01510 PF00013 KH domain ACRAD_RS01515 PF01544 CorA-like Mg2+ transporter protein ACRAD_RS01525 PF01556 DnaJ C terminal domain ACRAD_RS01525 PF00226 DnaJ domain ACRAD_RS01535 PF01430 Hsp33 protein ACRAD_RS01540 PF00999 Sodium/hydrogen exchanger family ACRAD_RS01540 PF02254 TrkA-N domain ACRAD_RS01545 PF18074 Primosomal protein N C-terminal domain ACRAD_RS01545 PF17764 3′ DNA-binding domain (3′BD) ACRAD_RS01545 PF00271 Helicase conserved C-terminal domain ACRAD_RS01545 PF00270 DEAD/DEAH box helicase ACRAD_RS01545 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ACRAD_RS01550 PF00482 Type II secretion system (T2SS), protein F ACRAD_RS01555 PF08334 Type II secretion system (T2SS), protein G ACRAD_RS01555 PF07963 Prokaryotic N-terminal methylation motif ACRAD_RS01565 PF00795 Carbon-nitrogen hydrolase ACRAD_RS01570 PF00571 CBS domain ACRAD_RS01570 PF03471 Transporter associated domain ACRAD_RS01580 PF01206 Sulfurtransferase TusA ACRAD_RS01585 PF01810 LysE type translocator ACRAD_RS01600 PF01177 Asp/Glu/Hydantoin racemase ACRAD_RS01610 PF00762 Ferrochelatase ACRAD_RS01615 PF00753 Metallo-beta-lactamase superfamily ACRAD_RS01625 PF03884 DNA gyrase inhibitor YacG ACRAD_RS01635 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACRAD_RS01635 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ACRAD_RS01635 PF13247 4Fe-4S dicluster domain ACRAD_RS01650 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ACRAD_RS01655 PF01197 Ribosomal protein L31 ACRAD_RS01660 PF03109 ABC1 family ACRAD_RS01665 PF01554 MatE ACRAD_RS01675 PF04055 Radical SAM superfamily ACRAD_RS01675 PF06969 HemN C-terminal domain ACRAD_RS01680 PF01810 LysE type translocator ACRAD_RS01705 PF13193 AMP-binding enzyme C-terminal domain ACRAD_RS01705 PF00501 AMP-binding enzyme ACRAD_RS01710 PF10150 Ribonuclease E/G family ACRAD_RS01710 PF12111 Polyribonucleotide phosphorylase C terminal ACRAD_RS01710 PF00575 S1 RNA binding domain ACRAD_RS01720 PF01479 S4 domain ACRAD_RS01720 PF00849 RNA pseudouridylate synthase ACRAD_RS01725 PF13419 Haloacid dehalogenase-like hydrolase ACRAD_RS01730 PF01557 Fumarylacetoacetate (FAA) hydrolase family ACRAD_RS01735 PF01118 Semialdehyde dehydrogenase, NAD binding domain ACRAD_RS01735 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation ACRAD_RS01740 PF00682 HMGL-like ACRAD_RS01740 PF07836 DmpG-like communication domain ACRAD_RS01750 PF03573 outer membrane porin, OprD family ACRAD_RS01755 PF00561 alpha/beta hydrolase fold ACRAD_RS01765 PF03466 LysR substrate binding domain ACRAD_RS01765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACRAD_RS01770 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ACRAD_RS01770 PF00355 Rieske [2Fe-2S] domain ACRAD_RS01775 PF00866 Ring hydroxylating beta subunit ACRAD_RS01780 PF00355 Rieske [2Fe-2S] domain ACRAD_RS01785 PF00106 short chain dehydrogenase ACRAD_RS01790 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ACRAD_RS01795 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACRAD_RS01795 PF14759 Reductase C-terminal ACRAD_RS01805 PF01545 Cation efflux family ACRAD_RS01805 PF16916 Dimerisation domain of Zinc Transporter ACRAD_RS01810 PF12706 Beta-lactamase superfamily domain ACRAD_RS01820 PF00199 Catalase ACRAD_RS01820 PF06628 Catalase-related immune-responsive ACRAD_RS01830 PF02770 Acyl-CoA dehydrogenase, middle domain ACRAD_RS01830 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACRAD_RS01830 PF18158 Adaptive response protein AidB N-terminal domain ACRAD_RS01840 PF02896 PEP-utilising enzyme, TIM barrel domain ACRAD_RS01840 PF05524 PEP-utilising enzyme, N-terminal ACRAD_RS01840 PF01590 GAF domain ACRAD_RS01840 PF00391 PEP-utilising enzyme, mobile domain ACRAD_RS01845 PF00293 NUDIX domain ACRAD_RS01855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACRAD_RS01855 PF03466 LysR substrate binding domain ACRAD_RS01860 PF00330 Aconitase family (aconitate hydratase) ACRAD_RS01865 PF00694 Aconitase C-terminal domain ACRAD_RS01875 PF00180 Isocitrate/isopropylmalate dehydrogenase ACRAD_RS01885 PF01176 Translation initiation factor 1A / IF-1 ACRAD_RS01895 PF01416 tRNA pseudouridine synthase ACRAD_RS01915 PF02774 Semialdehyde dehydrogenase, dimerisation domain ACRAD_RS01915 PF01118 Semialdehyde dehydrogenase, NAD binding domain ACRAD_RS01930 PF03279 Bacterial lipid A biosynthesis acyltransferase ACRAD_RS01935 PF01661 Macro domain ACRAD_RS01940 PF00005 ABC transporter ACRAD_RS01940 PF16326 ABC transporter C-terminal domain ACRAD_RS01940 PF12848 ABC transporter ACRAD_RS01945 PF04102 SlyX ACRAD_RS01960 PF01396 Topoisomerase DNA binding C4 zinc finger ACRAD_RS01960 PF01751 Toprim domain ACRAD_RS01960 PF01131 DNA topoisomerase ACRAD_RS01960 PF08272 Topoisomerase I zinc-ribbon-like ACRAD_RS01975 PF02595 Glycerate kinase family ACRAD_RS01980 PF00580 UvrD/REP helicase N-terminal domain ACRAD_RS01980 PF13361 UvrD-like helicase C-terminal domain ACRAD_RS01985 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) ACRAD_RS02000 PF00999 Sodium/hydrogen exchanger family ACRAD_RS02000 PF02254 TrkA-N domain ACRAD_RS02005 PF00471 Ribosomal protein L33 ACRAD_RS02010 PF00830 Ribosomal L28 family ACRAD_RS02015 PF00171 Aldehyde dehydrogenase family ACRAD_RS02020 PF00440 Bacterial regulatory proteins, tetR family ACRAD_RS02020 PF08360 QacR-like protein, C-terminal region ACRAD_RS02025 PF00551 Formyl transferase ACRAD_RS02025 PF01842 ACT domain ACRAD_RS02035 PF01618 MotA/TolQ/ExbB proton channel family ACRAD_RS02045 PF01625 Peptide methionine sulfoxide reductase ACRAD_RS02060 PF00186 Dihydrofolate reductase ACRAD_RS02065 PF00303 Thymidylate synthase ACRAD_RS02080 PF05401 Nodulation protein S (NodS) ACRAD_RS02100 PF01790 Prolipoprotein diacylglyceryl transferase ACRAD_RS02115 PF00902 Sec-independent protein translocase protein (TatC) ACRAD_RS02120 PF02416 mttA/Hcf106 family ACRAD_RS02125 PF02416 mttA/Hcf106 family ACRAD_RS02135 PF01725 Ham1 family ACRAD_RS02145 PF00561 alpha/beta hydrolase fold ACRAD_RS02145 PF07021 Methionine biosynthesis protein MetW ACRAD_RS02150 PF00561 alpha/beta hydrolase fold ACRAD_RS02155 PF00682 HMGL-like ACRAD_RS02155 PF08502 LeuA allosteric (dimerisation) domain ACRAD_RS02160 PF18331 PKHD-type hydroxylase C-terminal domain ACRAD_RS02160 PF13640 2OG-Fe(II) oxygenase superfamily ACRAD_RS02165 PF00593 TonB dependent receptor ACRAD_RS02165 PF07715 TonB-dependent Receptor Plug Domain ACRAD_RS02170 PF05697 Bacterial trigger factor protein (TF) ACRAD_RS02170 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ACRAD_RS02170 PF05698 Bacterial trigger factor protein (TF) C-terminus ACRAD_RS02175 PF00574 Clp protease ACRAD_RS02180 PF10431 C-terminal, D2-small domain, of ClpB protein ACRAD_RS02180 PF07724 AAA domain (Cdc48 subfamily) ACRAD_RS02180 PF06689 ClpX C4-type zinc finger ACRAD_RS02190 PF05681 Fumarate hydratase (Fumerase) ACRAD_RS02190 PF05683 Fumarase C-terminus ACRAD_RS02195 PF13649 Methyltransferase domain ACRAD_RS02200 PF07085 DRTGG domain ACRAD_RS02200 PF01515 Phosphate acetyl/butaryl transferase ACRAD_RS02205 PF00871 Acetokinase family ACRAD_RS02215 PF00171 Aldehyde dehydrogenase family ACRAD_RS02220 PF00561 alpha/beta hydrolase fold ACRAD_RS02230 PF00933 Glycosyl hydrolase family 3 N terminal domain ACRAD_RS02235 PF11818 C-terminal domain of tail specific protease (DUF3340) ACRAD_RS02235 PF00595 PDZ domain ACRAD_RS02235 PF03572 Peptidase family S41 ACRAD_RS02235 PF17804 Tail specific protease N-terminal domain ACRAD_RS02240 PF13439 Glycosyltransferase Family 4 ACRAD_RS02240 PF00534 Glycosyl transferases group 1 ACRAD_RS02245 PF01569 PAP2 superfamily ACRAD_RS02250 PF04384 Iron-sulphur cluster assembly ACRAD_RS02255 PF00334 Nucleoside diphosphate kinase ACRAD_RS02260 PF04055 Radical SAM superfamily ACRAD_RS02270 PF13464 Domain of unknown function (DUF4115) ACRAD_RS02275 PF04551 GcpE protein ACRAD_RS02280 PF13393 Histidyl-tRNA synthetase ACRAD_RS02280 PF03129 Anticodon binding domain ACRAD_RS02290 PF13360 PQQ-like domain ACRAD_RS02290 PF01011 PQQ enzyme repeat ACRAD_RS02295 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ACRAD_RS02295 PF01926 50S ribosome-binding GTPase ACRAD_RS02305 PF02355 Protein export membrane protein ACRAD_RS02305 PF07549 SecD/SecF GG Motif ACRAD_RS02310 PF13721 SecD export protein N-terminal TM region ACRAD_RS02310 PF02355 Protein export membrane protein ACRAD_RS02310 PF07549 SecD/SecF GG Motif ACRAD_RS02315 PF02699 Preprotein translocase subunit ACRAD_RS02320 PF01702 Queuine tRNA-ribosyltransferase ACRAD_RS02325 PF04011 LemA family ACRAD_RS02335 PF02547 Queuosine biosynthesis protein ACRAD_RS02345 PF13426 PAS domain ACRAD_RS02345 PF08448 PAS fold ACRAD_RS02345 PF00072 Response regulator receiver domain ACRAD_RS02345 PF00512 His Kinase A (phospho-acceptor) domain ACRAD_RS02345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACRAD_RS02350 PF08335 GlnD PII-uridylyltransferase ACRAD_RS02350 PF03710 Glutamate-ammonia ligase adenylyltransferase ACRAD_RS02355 PF01063 Amino-transferase class IV ACRAD_RS02365 PF01522 Polysaccharide deacetylase ACRAD_RS02380 PF16363 GDP-mannose 4,6 dehydratase ACRAD_RS02385 PF04321 RmlD substrate binding domain ACRAD_RS02390 PF00483 Nucleotidyl transferase ACRAD_RS02395 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase ACRAD_RS02400 PF00535 Glycosyl transferase family 2 ACRAD_RS02415 PF00152 tRNA synthetases class II (D, K and N) ACRAD_RS02415 PF02938 GAD domain ACRAD_RS02415 PF01336 OB-fold nucleic acid binding domain ACRAD_RS02425 PF07715 TonB-dependent Receptor Plug Domain ACRAD_RS02425 PF00593 TonB dependent receptor ACRAD_RS02455 PF02321 Outer membrane efflux protein ACRAD_RS02460 PF00005 ABC transporter ACRAD_RS02460 PF12704 MacB-like periplasmic core domain ACRAD_RS02460 PF02687 FtsX-like permease family ACRAD_RS02465 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ACRAD_RS02480 PF09334 tRNA synthetases class I (M) ACRAD_RS02480 PF08264 Anticodon-binding domain of tRNA ACRAD_RS02480 PF13603 Leucyl-tRNA synthetase, Domain 2 ACRAD_RS02480 PF00133 tRNA synthetases class I (I, L, M and V) ACRAD_RS02490 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ACRAD_RS02490 PF00205 Thiamine pyrophosphate enzyme, central domain ACRAD_RS02490 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ACRAD_RS02495 PF10369 Small subunit of acetolactate synthase ACRAD_RS02500 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ACRAD_RS02500 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ACRAD_RS02505 PF00990 Diguanylate cyclase, GGDEF domain ACRAD_RS02505 PF03707 Bacterial signalling protein N terminal repeat ACRAD_RS02505 PF00563 EAL domain ACRAD_RS02510 PF03144 Elongation factor Tu domain 2 ACRAD_RS02510 PF16658 Class II release factor RF3, C-terminal domain ACRAD_RS02510 PF00009 Elongation factor Tu GTP binding domain ACRAD_RS02525 PF01026 TatD related DNase ACRAD_RS02530 PF00694 Aconitase C-terminal domain ACRAD_RS02530 PF00330 Aconitase family (aconitate hydratase) ACRAD_RS02535 PF00899 ThiF family ACRAD_RS02540 PF01207 Dihydrouridine synthase (Dus) ACRAD_RS02550 PF07690 Major Facilitator Superfamily ACRAD_RS02555 PF00892 EamA-like transporter family ACRAD_RS02560 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ACRAD_RS02560 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ACRAD_RS02565 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch ACRAD_RS02570 PF02233 NAD(P) transhydrogenase beta subunit ACRAD_RS02580 PF01261 Xylose isomerase-like TIM barrel ACRAD_RS02585 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ACRAD_RS02585 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ACRAD_RS02590 PF00378 Enoyl-CoA hydratase/isomerase ACRAD_RS02595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACRAD_RS02595 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ACRAD_RS02595 PF00672 HAMP domain ACRAD_RS02595 PF00072 Response regulator receiver domain ACRAD_RS02595 PF01627 Hpt domain ACRAD_RS02595 PF00512 His Kinase A (phospho-acceptor) domain ACRAD_RS02600 PF00291 Pyridoxal-phosphate dependent enzyme ACRAD_RS02610 PF05958 tRNA (Uracil-5-)-methyltransferase ACRAD_RS02615 PF02824 TGS domain ACRAD_RS02615 PF04607 Region found in RelA / SpoT proteins ACRAD_RS02615 PF13291 ACT domain ACRAD_RS02625 PF03819 MazG nucleotide pyrophosphohydrolase domain ACRAD_RS02635 PF12627 Probable RNA and SrmB- binding site of polymerase A ACRAD_RS02635 PF01743 Poly A polymerase head domain ACRAD_RS02635 PF12626 Polymerase A arginine-rich C-terminus ACRAD_RS02640 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ACRAD_RS02645 PF02548 Ketopantoate hydroxymethyltransferase ACRAD_RS02650 PF02569 Pantoate-beta-alanine ligase ACRAD_RS02655 PF03668 P-loop ATPase protein family ACRAD_RS02660 PF00381 PTS HPr component phosphorylation site ACRAD_RS02665 PF04751 Protein of unknown function (DUF615) ACRAD_RS02680 PF00501 AMP-binding enzyme ACRAD_RS02680 PF13193 AMP-binding enzyme C-terminal domain ACRAD_RS02685 PF02824 TGS domain ACRAD_RS02685 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ACRAD_RS02685 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ACRAD_RS02685 PF03129 Anticodon binding domain ACRAD_RS02690 PF05198 Translation initiation factor IF-3, N-terminal domain ACRAD_RS02690 PF00707 Translation initiation factor IF-3, C-terminal domain ACRAD_RS02695 PF00011 Hsp20/alpha crystallin family ACRAD_RS02700 PF02798 Glutathione S-transferase, N-terminal domain ACRAD_RS02700 PF00043 Glutathione S-transferase, C-terminal domain ACRAD_RS02705 PF09335 SNARE associated Golgi protein ACRAD_RS02720 PF01632 Ribosomal protein L35 ACRAD_RS02725 PF00453 Ribosomal protein L20 ACRAD_RS02740 PF01409 tRNA synthetases class II core domain (F) ACRAD_RS02740 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ACRAD_RS02745 PF03483 B3/4 domain ACRAD_RS02745 PF03484 tRNA synthetase B5 domain ACRAD_RS02745 PF03147 Ferredoxin-fold anticodon binding domain ACRAD_RS02745 PF01588 Putative tRNA binding domain ACRAD_RS02745 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ACRAD_RS02750 PF00216 Bacterial DNA-binding protein ACRAD_RS02760 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ACRAD_RS02760 PF07497 Rho termination factor, RNA-binding domain ACRAD_RS02760 PF07498 Rho termination factor, N-terminal domain ACRAD_RS02765 PF00085 Thioredoxin ACRAD_RS02770 PF02541 Ppx/GppA phosphatase family ACRAD_RS02775 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ACRAD_RS02780 PF09179 TilS substrate binding domain ACRAD_RS02780 PF11734 TilS substrate C-terminal domain ACRAD_RS02780 PF01171 PP-loop family ACRAD_RS02785 PF14748 Pyrroline-5-carboxylate reductase dimerisation ACRAD_RS02785 PF03807 NADP oxidoreductase coenzyme F420-dependent ACRAD_RS02790 PF02325 YGGT family ACRAD_RS02795 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ACRAD_RS02795 PF00476 DNA polymerase family A ACRAD_RS02795 PF01612 3'-5' exonuclease ACRAD_RS02795 PF01367 5'-3' exonuclease, C-terminal SAM fold ACRAD_RS02815 PF00437 Type II/IV secretion system protein ACRAD_RS02820 PF02566 OsmC-like protein ACRAD_RS02825 PF00795 Carbon-nitrogen hydrolase ACRAD_RS02875 PF04386 Stringent starvation protein B ACRAD_RS02880 PF02798 Glutathione S-transferase, N-terminal domain ACRAD_RS02880 PF00043 Glutathione S-transferase, C-terminal domain ACRAD_RS02885 PF00380 Ribosomal protein S9/S16 ACRAD_RS02890 PF00572 Ribosomal protein L13 ACRAD_RS02900 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ACRAD_RS02905 PF00398 Ribosomal RNA adenine dimethylase ACRAD_RS02910 PF00149 Calcineurin-like phosphoesterase ACRAD_RS02920 PF04172 LrgB-like family ACRAD_RS02930 PF13167 GTP-binding GTPase N-terminal ACRAD_RS02930 PF16360 GTP-binding GTPase Middle Region ACRAD_RS02930 PF01926 50S ribosome-binding GTPase ACRAD_RS02940 PF13091 PLD-like domain ACRAD_RS02945 PF10518 TAT (twin-arginine translocation) pathway signal sequence ACRAD_RS02945 PF00149 Calcineurin-like phosphoesterase ACRAD_RS02950 PF00083 Sugar (and other) transporter ACRAD_RS02950 PF07690 Major Facilitator Superfamily ACRAD_RS02955 PF03006 Haemolysin-III related ACRAD_RS02965 PF01734 Patatin-like phospholipase ACRAD_RS02975 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ACRAD_RS02975 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ACRAD_RS02975 PF00378 Enoyl-CoA hydratase/isomerase ACRAD_RS02980 PF00108 Thiolase, N-terminal domain ACRAD_RS02980 PF02803 Thiolase, C-terminal domain ACRAD_RS02985 PF12833 Helix-turn-helix domain ACRAD_RS02985 PF02311 AraC-like ligand binding domain ACRAD_RS02990 PF02515 CoA-transferase family III ACRAD_RS02995 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ACRAD_RS02995 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ACRAD_RS03005 PF00667 FAD binding domain ACRAD_RS03005 PF00258 Flavodoxin ACRAD_RS03005 PF00175 Oxidoreductase NAD-binding domain ACRAD_RS03015 PF12805 FUSC-like inner membrane protein yccS ACRAD_RS03020 PF07690 Major Facilitator Superfamily ACRAD_RS03025 PF00881 Nitroreductase family ACRAD_RS03035 PF03616 Sodium/glutamate symporter ACRAD_RS03040 PF01235 Sodium:alanine symporter family ACRAD_RS03045 PF02417 Chromate transporter ACRAD_RS03050 PF01734 Patatin-like phospholipase ACRAD_RS03055 PF01144 Coenzyme A transferase ACRAD_RS03060 PF01144 Coenzyme A transferase ACRAD_RS03065 PF00682 HMGL-like ACRAD_RS03070 PF00289 Biotin carboxylase, N-terminal domain ACRAD_RS03070 PF00364 Biotin-requiring enzyme ACRAD_RS03070 PF02785 Biotin carboxylase C-terminal domain ACRAD_RS03070 PF18140 Propionyl-coenzyme A carboxylase BT domain ACRAD_RS03070 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ACRAD_RS03075 PF00378 Enoyl-CoA hydratase/isomerase ACRAD_RS03080 PF01039 Carboxyl transferase domain ACRAD_RS03085 PF02770 Acyl-CoA dehydrogenase, middle domain ACRAD_RS03085 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACRAD_RS03085 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACRAD_RS03090 PF00440 Bacterial regulatory proteins, tetR family ACRAD_RS03095 PF00501 AMP-binding enzyme ACRAD_RS03095 PF13193 AMP-binding enzyme C-terminal domain ACRAD_RS03100 PF05992 SbmA/BacA-like family ACRAD_RS03110 PF00892 EamA-like transporter family ACRAD_RS03125 PF02934 GatB/GatE catalytic domain ACRAD_RS03125 PF02637 GatB domain ACRAD_RS03130 PF01425 Amidase ACRAD_RS03135 PF02686 Glu-tRNAGln amidotransferase C subunit ACRAD_RS03145 PF04085 rod shape-determining protein MreC ACRAD_RS03150 PF04093 rod shape-determining protein MreD ACRAD_RS03155 PF02545 Maf-like protein ACRAD_RS03160 PF00575 S1 RNA binding domain ACRAD_RS03160 PF10150 Ribonuclease E/G family ACRAD_RS03165 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain ACRAD_RS03165 PF06974 Protein of unknown function (DUF1298) ACRAD_RS03170 PF01507 Phosphoadenosine phosphosulfate reductase family ACRAD_RS03195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACRAD_RS03195 PF08521 Two-component sensor kinase N-terminal ACRAD_RS03195 PF00512 His Kinase A (phospho-acceptor) domain ACRAD_RS03200 PF00486 Transcriptional regulatory protein, C terminal ACRAD_RS03200 PF00072 Response regulator receiver domain ACRAD_RS03205 PF00884 Sulfatase ACRAD_RS03205 PF08019 Phosphoethanolamine transferase EptA/EptB ACRAD_RS03215 PF00324 Amino acid permease ACRAD_RS03220 PF04303 PrpF protein ACRAD_RS03225 PF03831 PhnA domain ACRAD_RS03225 PF08274 PhnA Zinc-Ribbon ACRAD_RS03230 PF00348 Polyprenyl synthetase ACRAD_RS03235 PF01145 SPFH domain / Band 7 family ACRAD_RS03245 PF01734 Patatin-like phospholipase ACRAD_RS03255 PF07690 Major Facilitator Superfamily ACRAD_RS03265 PF08659 KR domain ACRAD_RS03265 PF00698 Acyl transferase domain ACRAD_RS03265 PF16197 Ketoacyl-synthetase C-terminal extension ACRAD_RS03265 PF00109 Beta-ketoacyl synthase, N-terminal domain ACRAD_RS03265 PF02801 Beta-ketoacyl synthase, C-terminal domain ACRAD_RS03265 PF08240 Alcohol dehydrogenase GroES-like domain ACRAD_RS03265 PF00550 Phosphopantetheine attachment site ACRAD_RS03265 PF14765 Polyketide synthase dehydratase ACRAD_RS03265 PF00107 Zinc-binding dehydrogenase ACRAD_RS03270 PF16925 Tetracyclin repressor-like, C-terminal domain ACRAD_RS03270 PF00440 Bacterial regulatory proteins, tetR family ACRAD_RS03285 PF13419 Haloacid dehalogenase-like hydrolase ACRAD_RS03290 PF00909 Ammonium Transporter Family ACRAD_RS03295 PF00005 ABC transporter ACRAD_RS03300 PF00528 Binding-protein-dependent transport system inner membrane component ACRAD_RS03305 PF00528 Binding-protein-dependent transport system inner membrane component ACRAD_RS03310 PF00497 Bacterial extracellular solute-binding proteins, family 3 ACRAD_RS03335 PF08264 Anticodon-binding domain of tRNA ACRAD_RS03335 PF00133 tRNA synthetases class I (I, L, M and V) ACRAD_RS03335 PF10458 Valyl tRNA synthetase tRNA binding arm ACRAD_RS03350 PF01906 Putative heavy-metal-binding ACRAD_RS03355 PF01906 Putative heavy-metal-binding ACRAD_RS03360 PF02321 Outer membrane efflux protein ACRAD_RS03370 PF00529 HlyD membrane-fusion protein of T1SS ACRAD_RS03370 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ACRAD_RS03375 PF01569 PAP2 superfamily ACRAD_RS03385 PF00348 Polyprenyl synthetase ACRAD_RS03390 PF00829 Ribosomal prokaryotic L21 protein ACRAD_RS03395 PF01016 Ribosomal L27 protein ACRAD_RS03400 PF03548 Outer membrane lipoprotein carrier protein LolA ACRAD_RS03405 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ACRAD_RS03405 PF02403 Seryl-tRNA synthetase N-terminal domain ACRAD_RS03425 PF01613 Flavin reductase like domain ACRAD_RS03435 PF14824 Sirohaem biosynthesis protein central ACRAD_RS03435 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ACRAD_RS03435 PF10414 Sirohaem synthase dimerisation region ACRAD_RS03440 PF00588 SpoU rRNA Methylase family ACRAD_RS03445 PF13520 Amino acid permease ACRAD_RS03450 PF00465 Iron-containing alcohol dehydrogenase ACRAD_RS03460 PF03099 Biotin/lipoate A/B protein ligase family ACRAD_RS03470 PF04546 Sigma-70, non-essential region ACRAD_RS03470 PF04539 Sigma-70 region 3 ACRAD_RS03470 PF00140 Sigma-70 factor, region 1.2 ACRAD_RS03470 PF04542 Sigma-70 region 2 ACRAD_RS03470 PF04545 Sigma-70, region 4 ACRAD_RS03470 PF03979 Sigma-70 factor, region 1.1 ACRAD_RS03485 PF09335 SNARE associated Golgi protein ACRAD_RS03495 PF00581 Rhodanese-like domain ACRAD_RS03495 PF17773 UPF0176 acylphosphatase like domain ACRAD_RS03505 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ACRAD_RS03510 PF02261 Aspartate decarboxylase ACRAD_RS03515 PF01195 Peptidyl-tRNA hydrolase ACRAD_RS03520 PF01386 Ribosomal L25p family ACRAD_RS03525 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ACRAD_RS03525 PF14572 Phosphoribosyl synthetase-associated domain ACRAD_RS03545 PF08544 GHMP kinases C terminal ACRAD_RS03545 PF00288 GHMP kinases N terminal domain ACRAD_RS03550 PF03550 Outer membrane lipoprotein LolB ACRAD_RS03560 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ACRAD_RS03560 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ACRAD_RS03560 PF01488 Shikimate / quinate 5-dehydrogenase ACRAD_RS03565 PF01807 CHC2 zinc finger ACRAD_RS03565 PF08275 DNA primase catalytic core, N-terminal domain ACRAD_RS03565 PF08278 DNA primase DnaG DnaB-binding ACRAD_RS03565 PF10410 DnaB-helicase binding domain of primase ACRAD_RS03570 PF13525 Outer membrane lipoprotein ACRAD_RS03575 PF01479 S4 domain ACRAD_RS03575 PF00849 RNA pseudouridylate synthase ACRAD_RS03580 PF02578 Multi-copper polyphenol oxidoreductase laccase ACRAD_RS03585 PF01668 SmpB protein ACRAD_RS03590 PF01467 Cytidylyltransferase-like ACRAD_RS03595 PF00037 4Fe-4S binding domain ACRAD_RS03625 PF02540 NAD synthase ACRAD_RS03625 PF00795 Carbon-nitrogen hydrolase ACRAD_RS03630 PF13296 Putative type VI secretion system Rhs element Vgr ACRAD_RS03630 PF04717 Type VI secretion system, phage-baseplate injector ACRAD_RS03630 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) ACRAD_RS03635 PF00285 Citrate synthase, C-terminal domain ACRAD_RS03640 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ACRAD_RS03645 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ACRAD_RS03650 PF00890 FAD binding domain ACRAD_RS03650 PF02910 Fumarate reductase flavoprotein C-term ACRAD_RS03655 PF13085 2Fe-2S iron-sulfur cluster binding domain ACRAD_RS03660 PF02779 Transketolase, pyrimidine binding domain ACRAD_RS03660 PF16078 2-oxoglutarate dehydrogenase N-terminus ACRAD_RS03660 PF00676 Dehydrogenase E1 component ACRAD_RS03660 PF16870 2-oxoglutarate dehydrogenase C-terminal ACRAD_RS03665 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ACRAD_RS03665 PF02817 e3 binding domain ACRAD_RS03665 PF00364 Biotin-requiring enzyme ACRAD_RS03670 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ACRAD_RS03670 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACRAD_RS03675 PF08442 ATP-grasp domain ACRAD_RS03675 PF00549 CoA-ligase ACRAD_RS03680 PF02629 CoA binding domain ACRAD_RS03680 PF00549 CoA-ligase ACRAD_RS03685 PF00579 tRNA synthetases class I (W and Y) ACRAD_RS03690 PF05661 Protein of unknown function (DUF808) ACRAD_RS03695 PF04228 Putative neutral zinc metallopeptidase ACRAD_RS03705 PF00999 Sodium/hydrogen exchanger family ACRAD_RS03725 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ACRAD_RS03735 PF03449 Transcription elongation factor, N-terminal ACRAD_RS03735 PF01272 Transcription elongation factor, GreA/GreB, C-term ACRAD_RS03740 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ACRAD_RS03740 PF02142 MGS-like domain ACRAD_RS03740 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ACRAD_RS03745 PF00117 Glutamine amidotransferase class-I ACRAD_RS03745 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ACRAD_RS03760 PF01985 CRS1 / YhbY (CRM) domain ACRAD_RS03765 PF01728 FtsJ-like methyltransferase ACRAD_RS03770 PF17862 AAA+ lid domain ACRAD_RS03770 PF01434 Peptidase family M41 ACRAD_RS03770 PF00004 ATPase family associated with various cellular activities (AAA) ACRAD_RS03770 PF06480 FtsH Extracellular ACRAD_RS03775 PF00809 Pterin binding enzyme ACRAD_RS03795 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ACRAD_RS03795 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ACRAD_RS03810 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain ACRAD_RS03810 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain ACRAD_RS03815 PF00781 Diacylglycerol kinase catalytic domain ACRAD_RS03825 PF00166 Chaperonin 10 Kd subunit ACRAD_RS03830 PF00118 TCP-1/cpn60 chaperonin family ACRAD_RS03850 PF00872 Transposase, Mutator family ACRAD_RS03865 PF01695 IstB-like ATP binding protein ACRAD_RS03880 PF13443 Cro/C1-type HTH DNA-binding domain ACRAD_RS03885 PF13087 AAA domain ACRAD_RS03885 PF13195 Protein of unknown function (DUF4011) ACRAD_RS03885 PF13087 AAA domain ACRAD_RS03885 PF13195 Protein of unknown function (DUF4011) ACRAD_RS03885 PF13086 AAA domain ACRAD_RS03885 PF13086 AAA domain ACRAD_RS03895 PF13356 Arm DNA-binding domain ACRAD_RS03895 PF00589 Phage integrase family ACRAD_RS03910 PF00873 AcrB/AcrD/AcrF family ACRAD_RS03915 PF00571 CBS domain ACRAD_RS03915 PF03448 MgtE intracellular N domain ACRAD_RS03915 PF01769 Divalent cation transporter ACRAD_RS03925 PF01435 Peptidase family M48 ACRAD_RS03930 PF01464 Transglycosylase SLT domain ACRAD_RS03930 PF10145 Phage-related minor tail protein ACRAD_RS03930 PF01551 Peptidase family M23 ACRAD_RS03935 PF01171 PP-loop family ACRAD_RS03945 PF00497 Bacterial extracellular solute-binding proteins, family 3 ACRAD_RS03945 PF01464 Transglycosylase SLT domain ACRAD_RS03950 PF01272 Transcription elongation factor, GreA/GreB, C-term ACRAD_RS03950 PF03449 Transcription elongation factor, N-terminal ACRAD_RS03965 PF02350 UDP-N-acetylglucosamine 2-epimerase ACRAD_RS04005 PF02785 Biotin carboxylase C-terminal domain ACRAD_RS04005 PF00289 Biotin carboxylase, N-terminal domain ACRAD_RS04005 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ACRAD_RS04020 PF08753 NikR C terminal nickel binding domain ACRAD_RS04020 PF01402 Ribbon-helix-helix protein, copG family ACRAD_RS04025 PF01425 Amidase ACRAD_RS04030 PF00497 Bacterial extracellular solute-binding proteins, family 3 ACRAD_RS04035 PF00893 Small Multidrug Resistance protein ACRAD_RS04050 PF00005 ABC transporter ACRAD_RS04055 PF00528 Binding-protein-dependent transport system inner membrane component ACRAD_RS04060 PF07690 Major Facilitator Superfamily ACRAD_RS04065 PF14525 AraC-binding-like domain ACRAD_RS04065 PF12833 Helix-turn-helix domain ACRAD_RS04075 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ACRAD_RS04075 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ACRAD_RS04080 PF01047 MarR family ACRAD_RS04085 PF01425 Amidase ACRAD_RS04090 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ACRAD_RS04105 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ACRAD_RS04105 PF00355 Rieske [2Fe-2S] domain ACRAD_RS04120 PF00111 2Fe-2S iron-sulfur cluster binding domain ACRAD_RS04120 PF00175 Oxidoreductase NAD-binding domain ACRAD_RS04125 PF01613 Flavin reductase like domain ACRAD_RS04130 PF00171 Aldehyde dehydrogenase family ACRAD_RS04150 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE ACRAD_RS04155 PF06812 ImpA, N-terminal, type VI secretion system ACRAD_RS04160 PF00004 ATPase family associated with various cellular activities (AAA) ACRAD_RS04160 PF10431 C-terminal, D2-small domain, of ClpB protein ACRAD_RS04160 PF17871 AAA lid domain ACRAD_RS04160 PF07724 AAA domain (Cdc48 subfamily) ACRAD_RS04175 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ACRAD_RS04190 PF05947 Type VI secretion system, TssF ACRAD_RS04205 PF06761 Intracellular multiplication and human macrophage-killing ACRAD_RS04205 PF14331 ImcF-related N-terminal domain ACRAD_RS04205 PF06744 Type VI secretion protein IcmF C-terminal ACRAD_RS04240 PF01208 Uroporphyrinogen decarboxylase (URO-D) ACRAD_RS04245 PF05675 Protein of unknown function (DUF817) ACRAD_RS04265 PF01227 GTP cyclohydrolase I ACRAD_RS04275 PF00218 Indole-3-glycerol phosphate synthase ACRAD_RS04280 PF00591 Glycosyl transferase family, a/b domain ACRAD_RS04280 PF02885 Glycosyl transferase family, helical bundle domain ACRAD_RS04285 PF00117 Glutamine amidotransferase class-I ACRAD_RS04290 PF03951 Glutamine synthetase, beta-Grasp domain ACRAD_RS04290 PF00120 Glutamine synthetase, catalytic domain ACRAD_RS04300 PF04345 Chorismate lyase ACRAD_RS04305 PF01040 UbiA prenyltransferase family ACRAD_RS04340 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ACRAD_RS04340 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ACRAD_RS04345 PF01784 NIF3 (NGG1p interacting factor 3) ACRAD_RS04350 PF13180 PDZ domain ACRAD_RS04355 PF12627 Probable RNA and SrmB- binding site of polymerase A ACRAD_RS04355 PF01743 Poly A polymerase head domain ACRAD_RS04360 PF00390 Malic enzyme, N-terminal domain ACRAD_RS04360 PF03949 Malic enzyme, NAD binding domain ACRAD_RS04360 PF01515 Phosphate acetyl/butaryl transferase ACRAD_RS04365 PF04452 RNA methyltransferase ACRAD_RS04370 PF02219 Methylenetetrahydrofolate reductase ACRAD_RS04375 PF05221 S-adenosyl-L-homocysteine hydrolase ACRAD_RS04375 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ACRAD_RS04380 PF00875 DNA photolyase ACRAD_RS04380 PF03441 FAD binding domain of DNA photolyase ACRAD_RS04385 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ACRAD_RS04390 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACRAD_RS04395 PF00768 D-alanyl-D-alanine carboxypeptidase ACRAD_RS04395 PF07943 Penicillin-binding protein 5, C-terminal domain ACRAD_RS04405 PF03971 Monomeric isocitrate dehydrogenase ACRAD_RS04415 PF00849 RNA pseudouridylate synthase ACRAD_RS04420 PF00180 Isocitrate/isopropylmalate dehydrogenase ACRAD_RS04430 PF02567 Phenazine biosynthesis-like protein ACRAD_RS04435 PF00375 Sodium:dicarboxylate symporter family ACRAD_RS04440 PF05193 Peptidase M16 inactive domain ACRAD_RS04440 PF00675 Insulinase (Peptidase family M16) ACRAD_RS04460 PF01928 CYTH domain ACRAD_RS04470 PF02581 Thiamine monophosphate synthase ACRAD_RS04475 PF00202 Aminotransferase class-III ACRAD_RS04490 PF00849 RNA pseudouridylate synthase ACRAD_RS04495 PF00271 Helicase conserved C-terminal domain ACRAD_RS04495 PF00176 SNF2 family N-terminal domain ACRAD_RS04495 PF18339 RapA N-terminal Tudor like domain 1 ACRAD_RS04495 PF18337 RapA N-terminal Tudor like domain ACRAD_RS04495 PF12137 RNA polymerase recycling family C-terminal ACRAD_RS04505 PF00440 Bacterial regulatory proteins, tetR family ACRAD_RS04510 PF00175 Oxidoreductase NAD-binding domain ACRAD_RS04510 PF00970 Oxidoreductase FAD-binding domain ACRAD_RS04510 PF00111 2Fe-2S iron-sulfur cluster binding domain ACRAD_RS04515 PF00487 Fatty acid desaturase ACRAD_RS04525 PF00202 Aminotransferase class-III ACRAD_RS04530 PF00282 Pyridoxal-dependent decarboxylase conserved domain ACRAD_RS04535 PF01037 Lrp/AsnC ligand binding domain ACRAD_RS04540 PF00205 Thiamine pyrophosphate enzyme, central domain ACRAD_RS04540 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ACRAD_RS04540 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ACRAD_RS04545 PF00324 Amino acid permease ACRAD_RS04555 PF00528 Binding-protein-dependent transport system inner membrane component ACRAD_RS04560 PF00528 Binding-protein-dependent transport system inner membrane component ACRAD_RS04565 PF00005 ABC transporter ACRAD_RS04580 PF01343 Peptidase family S49 ACRAD_RS04580 PF08496 Peptidase family S49 N-terminal ACRAD_RS04595 PF08328 Adenylosuccinate lyase C-terminal ACRAD_RS04595 PF00206 Lyase ACRAD_RS04600 PF04356 Protein of unknown function (DUF489) ACRAD_RS04610 PF00293 NUDIX domain ACRAD_RS04615 PF00132 Bacterial transferase hexapeptide (six repeats) ACRAD_RS04620 PF00768 D-alanyl-D-alanine carboxypeptidase ACRAD_RS04620 PF07943 Penicillin-binding protein 5, C-terminal domain ACRAD_RS04635 PF01975 Survival protein SurE ACRAD_RS04640 PF01551 Peptidase family M23 ACRAD_RS04640 PF01476 LysM domain ACRAD_RS04645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACRAD_RS04645 PF03466 LysR substrate binding domain ACRAD_RS04650 PF00202 Aminotransferase class-III ACRAD_RS04655 PF00462 Glutaredoxin ACRAD_RS04665 PF13936 Helix-turn-helix domain ACRAD_RS04665 PF00665 Integrase core domain ACRAD_RS04675 PF07690 Major Facilitator Superfamily ACRAD_RS04680 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ACRAD_RS04685 PF13593 SBF-like CPA transporter family (DUF4137) ACRAD_RS04690 PF01197 Ribosomal protein L31 ACRAD_RS04705 PF04055 Radical SAM superfamily ACRAD_RS04710 PF01132 Elongation factor P (EF-P) OB domain ACRAD_RS04710 PF09285 Elongation factor P, C-terminal ACRAD_RS04710 PF08207 Elongation factor P (EF-P) KOW-like domain ACRAD_RS04715 PF13722 5TM C-terminal transporter carbon starvation CstA ACRAD_RS04715 PF02554 Carbon starvation protein CstA ACRAD_RS04720 PF04328 Selenoprotein, putative ACRAD_RS04725 PF07726 ATPase family associated with various cellular activities (AAA) ACRAD_RS04725 PF17863 AAA lid domain ACRAD_RS04735 PF11992 Domain of unknown function (DUF3488) ACRAD_RS04735 PF13559 Domain of unknown function (DUF4129) ACRAD_RS04735 PF01841 Transglutaminase-like superfamily ACRAD_RS04760 PF01740 STAS domain ACRAD_RS04760 PF00916 Sulfate permease family ACRAD_RS04770 PF00860 Permease family ACRAD_RS04775 PF00962 Adenosine/AMP deaminase ACRAD_RS04795 PF01351 Ribonuclease HII ACRAD_RS04800 PF02599 Global regulator protein family ACRAD_RS04805 PF13737 Transposase DDE domain ACRAD_RS04810 PF01842 ACT domain ACRAD_RS04810 PF00696 Amino acid kinase family ACRAD_RS04810 PF13840 ACT domain ACRAD_RS04815 PF02272 DHHA1 domain ACRAD_RS04815 PF01411 tRNA synthetases class II (A) ACRAD_RS04815 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ACRAD_RS04820 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ACRAD_RS04820 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ACRAD_RS04830 PF13393 Histidyl-tRNA synthetase ACRAD_RS04835 PF00709 Adenylosuccinate synthetase ACRAD_RS04850 PF00248 Aldo/keto reductase family ACRAD_RS04855 PF13545 Crp-like helix-turn-helix domain ACRAD_RS04855 PF00027 Cyclic nucleotide-binding domain ACRAD_RS04860 PF02566 OsmC-like protein ACRAD_RS04865 PF07724 AAA domain (Cdc48 subfamily) ACRAD_RS04865 PF10431 C-terminal, D2-small domain, of ClpB protein ACRAD_RS04865 PF17871 AAA lid domain ACRAD_RS04865 PF00004 ATPase family associated with various cellular activities (AAA) ACRAD_RS04865 PF02861 Clp amino terminal domain, pathogenicity island component ACRAD_RS04870 PF01170 Putative RNA methylase family UPF0020 ACRAD_RS04870 PF02926 THUMP domain ACRAD_RS04870 PF10672 S-adenosylmethionine-dependent methyltransferase ACRAD_RS04880 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ACRAD_RS04880 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ACRAD_RS04885 PF01979 Amidohydrolase family ACRAD_RS04890 PF01389 OmpA-like transmembrane domain ACRAD_RS04890 PF00691 OmpA family ACRAD_RS04905 PF12697 Alpha/beta hydrolase family ACRAD_RS04905 PF08241 Methyltransferase domain ACRAD_RS04910 PF02390 Putative methyltransferase ACRAD_RS04915 PF00043 Glutathione S-transferase, C-terminal domain ACRAD_RS04915 PF02798 Glutathione S-transferase, N-terminal domain ACRAD_RS04920 PF05690 Thiazole biosynthesis protein ThiG ACRAD_RS04935 PF04545 Sigma-70, region 4 ACRAD_RS04935 PF04542 Sigma-70 region 2 ACRAD_RS04935 PF00140 Sigma-70 factor, region 1.2 ACRAD_RS04945 PF00313 'Cold-shock' DNA-binding domain ACRAD_RS04950 PF00271 Helicase conserved C-terminal domain ACRAD_RS04950 PF00270 DEAD/DEAH box helicase ACRAD_RS04960 PF00881 Nitroreductase family ACRAD_RS04965 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ACRAD_RS04965 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ACRAD_RS04985 PF01180 Dihydroorotate dehydrogenase ACRAD_RS04990 PF02674 Colicin V production protein ACRAD_RS04995 PF00156 Phosphoribosyl transferase domain ACRAD_RS05010 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ACRAD_RS05010 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ACRAD_RS05015 PF01435 Peptidase family M48 ACRAD_RS05020 PF09424 Yqey-like protein ACRAD_RS05025 PF01165 Ribosomal protein S21 ACRAD_RS05030 PF00814 Glycoprotease family ACRAD_RS05035 PF00905 Penicillin binding protein transpeptidase domain ACRAD_RS05050 PF00069 Protein kinase domain ACRAD_RS05050 PF03793 PASTA domain ACRAD_RS05080 PF00753 Metallo-beta-lactamase superfamily ACRAD_RS05080 PF16123 Hydroxyacylglutathione hydrolase C-terminus ACRAD_RS05085 PF02843 Phosphoribosylglycinamide synthetase, C domain ACRAD_RS05085 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ACRAD_RS05085 PF02844 Phosphoribosylglycinamide synthetase, N domain ACRAD_RS05090 PF02142 MGS-like domain ACRAD_RS05090 PF01808 AICARFT/IMPCHase bienzyme ACRAD_RS05095 PF02954 Bacterial regulatory protein, Fis family ACRAD_RS05120 PF01134 Glucose inhibited division protein A ACRAD_RS05120 PF13932 GidA associated domain ACRAD_RS05130 PF14403 Circularly permuted ATP-grasp type 2 ACRAD_RS05150 PF01168 Alanine racemase, N-terminal domain ACRAD_RS05150 PF00842 Alanine racemase, C-terminal domain ACRAD_RS05155 PF00772 DnaB-like helicase N terminal domain ACRAD_RS05155 PF03796 DnaB-like helicase C terminal domain ACRAD_RS05160 PF01281 Ribosomal protein L9, N-terminal domain ACRAD_RS05160 PF03948 Ribosomal protein L9, C-terminal domain ACRAD_RS05165 PF01084 Ribosomal protein S18 ACRAD_RS05170 PF01250 Ribosomal protein S6 ACRAD_RS05175 PF01040 UbiA prenyltransferase family ACRAD_RS05180 PF03626 Prokaryotic Cytochrome C oxidase subunit IV ACRAD_RS05185 PF00510 Cytochrome c oxidase subunit III ACRAD_RS05190 PF00115 Cytochrome C and Quinol oxidase polypeptide I ACRAD_RS05195 PF06481 COX Aromatic Rich Motif ACRAD_RS05195 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ACRAD_RS05215 PF00872 Transposase, Mutator family ACRAD_RS05220 PF02896 PEP-utilising enzyme, TIM barrel domain ACRAD_RS05220 PF00391 PEP-utilising enzyme, mobile domain ACRAD_RS05220 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ACRAD_RS05225 PF03618 Kinase/pyrophosphorylase ACRAD_RS05245 PF00296 Luciferase-like monooxygenase ACRAD_RS05260 PF03462 PCRF domain ACRAD_RS05260 PF00472 RF-1 domain ACRAD_RS05265 PF17827 PrmC N-terminal domain ACRAD_RS05265 PF13847 Methyltransferase domain ACRAD_RS05270 PF12833 Helix-turn-helix domain ACRAD_RS05270 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ACRAD_RS05275 PF00106 short chain dehydrogenase ACRAD_RS05280 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACRAD_RS05280 PF02770 Acyl-CoA dehydrogenase, middle domain ACRAD_RS05280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACRAD_RS05285 PF00501 AMP-binding enzyme ACRAD_RS05285 PF13193 AMP-binding enzyme C-terminal domain ACRAD_RS05295 PF00899 ThiF family ACRAD_RS05300 PF03109 ABC1 family ACRAD_RS05305 PF02152 Dihydroneopterin aldolase ACRAD_RS05315 PF03232 Ubiquinone biosynthesis protein COQ7 ACRAD_RS05320 PF07690 Major Facilitator Superfamily ACRAD_RS05325 PF17243 POTRA domain TamA domain 1 ACRAD_RS05325 PF07244 Surface antigen variable number repeat ACRAD_RS05325 PF01103 Surface antigen ACRAD_RS05330 PF04357 TamB, inner membrane protein subunit of TAM complex ACRAD_RS05345 PF11791 Aconitate B N-terminal domain ACRAD_RS05345 PF06434 Aconitate hydratase 2 N-terminus ACRAD_RS05345 PF00330 Aconitase family (aconitate hydratase) ACRAD_RS05360 PF01037 Lrp/AsnC ligand binding domain ACRAD_RS05365 PF01032 FecCD transport family ACRAD_RS05370 PF01032 FecCD transport family ACRAD_RS05375 PF00005 ABC transporter ACRAD_RS05380 PF01497 Periplasmic binding protein ACRAD_RS05385 PF07690 Major Facilitator Superfamily ACRAD_RS05390 PF03616 Sodium/glutamate symporter ACRAD_RS05395 PF03466 LysR substrate binding domain ACRAD_RS05395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACRAD_RS05400 PF04284 Protein of unknown function (DUF441) ACRAD_RS05410 PF01479 S4 domain ACRAD_RS05410 PF00849 RNA pseudouridylate synthase ACRAD_RS05420 PF00849 RNA pseudouridylate synthase ACRAD_RS05425 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ACRAD_RS05430 PF01119 DNA mismatch repair protein, C-terminal domain ACRAD_RS05430 PF08676 MutL C terminal dimerisation domain ACRAD_RS05440 PF17209 Hfq protein ACRAD_RS05445 PF09312 SurA N-terminal domain ACRAD_RS05445 PF00639 PPIC-type PPIASE domain ACRAD_RS05450 PF04453 LPS transport system D ACRAD_RS05450 PF03968 OstA-like protein ACRAD_RS05455 PF01636 Phosphotransferase enzyme family ACRAD_RS05460 PF00483 Nucleotidyl transferase ACRAD_RS05465 PF02527 rRNA small subunit methyltransferase G ACRAD_RS05470 PF13614 AAA domain ACRAD_RS05475 PF02195 ParB-like nuclease domain ACRAD_RS05475 PF17762 HTH domain found in ParB protein ACRAD_RS05480 PF01618 MotA/TolQ/ExbB proton channel family ACRAD_RS05490 PF00005 ABC transporter ACRAD_RS05490 PF00664 ABC transporter transmembrane region ACRAD_RS05495 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ACRAD_RS05500 PF02348 Cytidylyltransferase ACRAD_RS05505 PF09115 DNA polymerase III, delta subunit, C terminal ACRAD_RS05515 PF01026 TatD related DNase ACRAD_RS05525 PF08334 Type II secretion system (T2SS), protein G ACRAD_RS05525 PF07963 Prokaryotic N-terminal methylation motif ACRAD_RS05530 PF02501 Type II secretion system (T2SS), protein I ACRAD_RS05530 PF07963 Prokaryotic N-terminal methylation motif ACRAD_RS05535 PF11612 Type II secretion system (T2SS), protein J ACRAD_RS05535 PF07963 Prokaryotic N-terminal methylation motif ACRAD_RS05540 PF03934 Type II secretion system (T2SS), protein K ACRAD_RS05550 PF03167 Uracil DNA glycosylase superfamily ACRAD_RS05560 PF14437 MafB19-like deaminase ACRAD_RS05570 PF02224 Cytidylate kinase ACRAD_RS05575 PF00575 S1 RNA binding domain ACRAD_RS05580 PF00216 Bacterial DNA-binding protein ACRAD_RS05600 PF01381 Helix-turn-helix ACRAD_RS05600 PF08671 Anti-repressor SinI ACRAD_RS05605 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ACRAD_RS05610 PF03956 Lysine exporter LysO ACRAD_RS05615 PF00743 Flavin-binding monooxygenase-like ACRAD_RS05625 PF03969 AFG1-like ATPase ACRAD_RS05630 PF01274 Malate synthase ACRAD_RS05635 PF01266 FAD dependent oxidoreductase ACRAD_RS05640 PF03466 LysR substrate binding domain ACRAD_RS05640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACRAD_RS05650 PF04055 Radical SAM superfamily ACRAD_RS05655 PF00676 Dehydrogenase E1 component ACRAD_RS05660 PF02779 Transketolase, pyrimidine binding domain ACRAD_RS05660 PF02780 Transketolase, C-terminal domain ACRAD_RS05665 PF02817 e3 binding domain ACRAD_RS05665 PF00364 Biotin-requiring enzyme ACRAD_RS05665 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ACRAD_RS05670 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACRAD_RS05670 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ACRAD_RS05675 PF08240 Alcohol dehydrogenase GroES-like domain ACRAD_RS05675 PF00107 Zinc-binding dehydrogenase ACRAD_RS05680 PF00106 short chain dehydrogenase ACRAD_RS05710 PF05525 Branched-chain amino acid transport protein ACRAD_RS05715 PF00557 Metallopeptidase family M24 ACRAD_RS05720 PF03466 LysR substrate binding domain ACRAD_RS05720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACRAD_RS05730 PF03466 LysR substrate binding domain ACRAD_RS05730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACRAD_RS05735 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACRAD_RS05735 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACRAD_RS05735 PF02770 Acyl-CoA dehydrogenase, middle domain ACRAD_RS05740 PF07690 Major Facilitator Superfamily ACRAD_RS05745 PF02515 CoA-transferase family III ACRAD_RS05750 PF07290 Protein of unknown function (DUF1449) ACRAD_RS05760 PF00294 pfkB family carbohydrate kinase ACRAD_RS05765 PF05193 Peptidase M16 inactive domain ACRAD_RS05765 PF00675 Insulinase (Peptidase family M16) ACRAD_RS05765 PF08367 Peptidase M16C associated ACRAD_RS05770 PF02253 Phospholipase A1 ACRAD_RS05775 PF02386 Cation transport protein ACRAD_RS05780 PF02080 TrkA-C domain ACRAD_RS05780 PF02254 TrkA-N domain ACRAD_RS05785 PF00291 Pyridoxal-phosphate dependent enzyme ACRAD_RS05785 PF00585 C-terminal regulatory domain of Threonine dehydratase ACRAD_RS05790 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ACRAD_RS05800 PF02774 Semialdehyde dehydrogenase, dimerisation domain ACRAD_RS05800 PF01118 Semialdehyde dehydrogenase, NAD binding domain ACRAD_RS05810 PF13936 Helix-turn-helix domain ACRAD_RS05810 PF00665 Integrase core domain ACRAD_RS05820 PF02617 ATP-dependent Clp protease adaptor protein ClpS ACRAD_RS05825 PF07724 AAA domain (Cdc48 subfamily) ACRAD_RS05825 PF17871 AAA lid domain ACRAD_RS05825 PF02861 Clp amino terminal domain, pathogenicity island component ACRAD_RS05825 PF10431 C-terminal, D2-small domain, of ClpB protein ACRAD_RS05825 PF00004 ATPase family associated with various cellular activities (AAA) ACRAD_RS05830 PF02694 Uncharacterised BCR, YnfA/UPF0060 family ACRAD_RS05840 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ACRAD_RS05840 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ACRAD_RS05845 PF00440 Bacterial regulatory proteins, tetR family ACRAD_RS05855 PF00285 Citrate synthase, C-terminal domain ACRAD_RS05865 PF02954 Bacterial regulatory protein, Fis family ACRAD_RS05865 PF00158 Sigma-54 interaction domain ACRAD_RS05865 PF00072 Response regulator receiver domain ACRAD_RS05870 PF00989 PAS fold ACRAD_RS05870 PF00512 His Kinase A (phospho-acceptor) domain ACRAD_RS05870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACRAD_RS05875 PF00919 Uncharacterized protein family UPF0004 ACRAD_RS05875 PF18693 TRAM domain ACRAD_RS05875 PF04055 Radical SAM superfamily ACRAD_RS05880 PF00696 Amino acid kinase family ACRAD_RS05885 PF01765 Ribosome recycling factor ACRAD_RS05890 PF01255 Putative undecaprenyl diphosphate synthase ACRAD_RS05900 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ACRAD_RS05900 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ACRAD_RS05900 PF13288 DXP reductoisomerase C-terminal domain ACRAD_RS05905 PF02163 Peptidase family M50 ACRAD_RS05905 PF13180 PDZ domain ACRAD_RS05905 PF17820 PDZ domain ACRAD_RS05910 PF01103 Surface antigen ACRAD_RS05910 PF07244 Surface antigen variable number repeat ACRAD_RS05920 PF00132 Bacterial transferase hexapeptide (six repeats) ACRAD_RS05920 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ACRAD_RS05925 PF07977 FabA-like domain ACRAD_RS05930 PF00132 Bacterial transferase hexapeptide (six repeats) ACRAD_RS05930 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ACRAD_RS05945 PF02631 RecX family ACRAD_RS05950 PF00154 recA bacterial DNA recombination protein ACRAD_RS05955 PF01479 S4 domain ACRAD_RS05960 PF13419 Haloacid dehalogenase-like hydrolase ACRAD_RS05965 PF00459 Inositol monophosphatase family ACRAD_RS05975 PF01649 Ribosomal protein S20 ACRAD_RS05980 PF13460 NAD(P)H-binding ACRAD_RS05985 PF03737 Aldolase/RraA ACRAD_RS06000 PF00271 Helicase conserved C-terminal domain ACRAD_RS06000 PF00270 DEAD/DEAH box helicase ACRAD_RS06000 PF17757 UvrB interaction domain ACRAD_RS06000 PF03461 TRCF domain ACRAD_RS06000 PF02559 CarD-like/TRCF domain ACRAD_RS06010 PF00211 Adenylate and Guanylate cyclase catalytic domain ACRAD_RS06015 PF00111 2Fe-2S iron-sulfur cluster binding domain ACRAD_RS06020 PF00012 Hsp70 protein ACRAD_RS06025 PF00226 DnaJ domain ACRAD_RS06025 PF07743 HSCB C-terminal oligomerisation domain ACRAD_RS06030 PF01521 Iron-sulphur cluster biosynthesis ACRAD_RS06035 PF01592 NifU-like N terminal domain ACRAD_RS06040 PF00266 Aminotransferase class-V ACRAD_RS06045 PF02082 Transcriptional regulator ACRAD_RS06060 PF00216 Bacterial DNA-binding protein ACRAD_RS06075 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACRAD_RS06075 PF02770 Acyl-CoA dehydrogenase, middle domain ACRAD_RS06075 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACRAD_RS06080 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACRAD_RS06080 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACRAD_RS06080 PF02770 Acyl-CoA dehydrogenase, middle domain ACRAD_RS06085 PF03109 ABC1 family ACRAD_RS06100 PF05175 Methyltransferase small domain ACRAD_RS06105 PF01264 Chorismate synthase ACRAD_RS06110 PF00994 Probable molybdopterin binding domain ACRAD_RS06110 PF18146 Damage-inducible protein CinA KH domain ACRAD_RS06110 PF02464 Competence-damaged protein ACRAD_RS06125 PF01551 Peptidase family M23 ACRAD_RS06125 PF08460 Bacterial SH3 domain ACRAD_RS06140 PF00313 'Cold-shock' DNA-binding domain ACRAD_RS06145 PF04239 Protein of unknown function (DUF421) ACRAD_RS06150 PF01569 PAP2 superfamily ACRAD_RS06160 PF00756 Putative esterase ACRAD_RS06225 PF01425 Amidase ACRAD_RS06235 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ACRAD_RS06235 PF02785 Biotin carboxylase C-terminal domain ACRAD_RS06235 PF00289 Biotin carboxylase, N-terminal domain ACRAD_RS06240 PF00364 Biotin-requiring enzyme ACRAD_RS06245 PF01220 Dehydroquinase class II ACRAD_RS06265 PF02635 DsrE/DsrF-like family ACRAD_RS06270 PF16363 GDP-mannose 4,6 dehydratase ACRAD_RS06275 PF10415 Fumarase C C-terminus ACRAD_RS06275 PF00206 Lyase ACRAD_RS06280 PF00893 Small Multidrug Resistance protein ACRAD_RS06330 PF01654 Cytochrome bd terminal oxidase subunit I ACRAD_RS06335 PF02322 Cytochrome bd terminal oxidase subunit II ACRAD_RS06350 PF00155 Aminotransferase class I and II ACRAD_RS06350 PF00392 Bacterial regulatory proteins, gntR family ACRAD_RS06375 PF00106 short chain dehydrogenase ACRAD_RS06385 PF01619 Proline dehydrogenase ACRAD_RS06385 PF14850 DNA-binding domain of Proline dehydrogenase ACRAD_RS06385 PF18327 Proline utilization A proline dehydrogenase N-terminal domain ACRAD_RS06385 PF00171 Aldehyde dehydrogenase family ACRAD_RS06390 PF01037 Lrp/AsnC ligand binding domain ACRAD_RS06395 PF00474 Sodium:solute symporter family ACRAD_RS06400 PF10415 Fumarase C C-terminus ACRAD_RS06400 PF00206 Lyase ACRAD_RS06410 PF13091 PLD-like domain ACRAD_RS06415 PF08240 Alcohol dehydrogenase GroES-like domain ACRAD_RS06415 PF00107 Zinc-binding dehydrogenase ACRAD_RS06420 PF00155 Aminotransferase class I and II ACRAD_RS06425 PF00324 Amino acid permease ACRAD_RS06435 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ACRAD_RS06440 PF00793 DAHP synthetase I family ACRAD_RS06445 PF07690 Major Facilitator Superfamily ACRAD_RS06450 PF01597 Glycine cleavage H-protein ACRAD_RS06455 PF12833 Helix-turn-helix domain ACRAD_RS06455 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ACRAD_RS06465 PF00005 ABC transporter ACRAD_RS06465 PF00664 ABC transporter transmembrane region ACRAD_RS06470 PF13185 GAF domain ACRAD_RS06470 PF00990 Diguanylate cyclase, GGDEF domain ACRAD_RS06485 PF17158 Membrane-associated sensor, integral membrane domain ACRAD_RS06485 PF00990 Diguanylate cyclase, GGDEF domain ACRAD_RS06505 PF00924 Mechanosensitive ion channel ACRAD_RS06510 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) ACRAD_RS06520 PF00375 Sodium:dicarboxylate symporter family ACRAD_RS06525 PF01740 STAS domain ACRAD_RS06525 PF00916 Sulfate permease family ACRAD_RS06535 PF00210 Ferritin-like domain ACRAD_RS06560 PF00596 Class II Aldolase and Adducin N-terminal domain ACRAD_RS06565 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ACRAD_RS06570 PF00378 Enoyl-CoA hydratase/isomerase ACRAD_RS06575 PF03060 Nitronate monooxygenase ACRAD_RS06590 PF01062 Bestrophin, RFP-TM, chloride channel ACRAD_RS06595 PF00155 Aminotransferase class I and II ACRAD_RS06600 PF06826 Predicted Permease Membrane Region ACRAD_RS06600 PF02080 TrkA-C domain ACRAD_RS06625 PF00873 AcrB/AcrD/AcrF family ACRAD_RS06635 PF03466 LysR substrate binding domain ACRAD_RS06635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACRAD_RS06725 PF07690 Major Facilitator Superfamily ACRAD_RS06725 PF00083 Sugar (and other) transporter ACRAD_RS06730 PF00378 Enoyl-CoA hydratase/isomerase ACRAD_RS06735 PF00378 Enoyl-CoA hydratase/isomerase ACRAD_RS06740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACRAD_RS06740 PF02770 Acyl-CoA dehydrogenase, middle domain ACRAD_RS06740 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACRAD_RS06745 PF00501 AMP-binding enzyme ACRAD_RS06745 PF13193 AMP-binding enzyme C-terminal domain ACRAD_RS06750 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ACRAD_RS06750 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ACRAD_RS06755 PF00171 Aldehyde dehydrogenase family ACRAD_RS06760 PF03466 LysR substrate binding domain ACRAD_RS06760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACRAD_RS06765 PF00132 Bacterial transferase hexapeptide (six repeats) ACRAD_RS06770 PF07848 PaaX-like protein ACRAD_RS06770 PF08223 PaaX-like protein C-terminal domain ACRAD_RS06775 PF00501 AMP-binding enzyme ACRAD_RS06775 PF14535 AMP-binding enzyme C-terminal domain ACRAD_RS06780 PF00378 Enoyl-CoA hydratase/isomerase ACRAD_RS06785 PF00970 Oxidoreductase FAD-binding domain ACRAD_RS06785 PF00111 2Fe-2S iron-sulfur cluster binding domain ACRAD_RS06785 PF00175 Oxidoreductase NAD-binding domain ACRAD_RS06790 PF01883 Iron-sulfur cluster assembly protein ACRAD_RS06795 PF05138 Phenylacetic acid catabolic protein ACRAD_RS06800 PF06243 Phenylacetic acid degradation B ACRAD_RS06805 PF05138 Phenylacetic acid catabolic protein ACRAD_RS06810 PF01575 MaoC like domain ACRAD_RS06810 PF00171 Aldehyde dehydrogenase family ACRAD_RS06815 PF00753 Metallo-beta-lactamase superfamily ACRAD_RS06820 PF00005 ABC transporter ACRAD_RS06820 PF03459 TOBE domain ACRAD_RS06825 PF00528 Binding-protein-dependent transport system inner membrane component ACRAD_RS06835 PF03454 MoeA C-terminal region (domain IV) ACRAD_RS06835 PF00994 Probable molybdopterin binding domain ACRAD_RS06835 PF03453 MoeA N-terminal region (domain I and II) ACRAD_RS06840 PF01967 MoaC family ACRAD_RS06840 PF00994 Probable molybdopterin binding domain ACRAD_RS06845 PF02391 MoaE protein ACRAD_RS06855 PF06463 Molybdenum Cofactor Synthesis C ACRAD_RS06855 PF04055 Radical SAM superfamily ACRAD_RS06860 PF12804 MobA-like NTP transferase domain ACRAD_RS06865 PF01568 Molydopterin dinucleotide binding domain ACRAD_RS06865 PF00384 Molybdopterin oxidoreductase ACRAD_RS06865 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ACRAD_RS06865 PF04324 BFD-like [2Fe-2S] binding domain ACRAD_RS06875 PF04324 BFD-like [2Fe-2S] binding domain ACRAD_RS06875 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ACRAD_RS06875 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ACRAD_RS06875 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACRAD_RS06875 PF18267 Rubredoxin NAD+ reductase C-terminal domain ACRAD_RS06880 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACRAD_RS06880 PF18267 Rubredoxin NAD+ reductase C-terminal domain ACRAD_RS06880 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ACRAD_RS06880 PF04324 BFD-like [2Fe-2S] binding domain ACRAD_RS06880 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ACRAD_RS06885 PF07690 Major Facilitator Superfamily ACRAD_RS06905 PF04966 Carbohydrate-selective porin, OprB family ACRAD_RS06910 PF01011 PQQ enzyme repeat ACRAD_RS06915 PF13742 OB-fold nucleic acid binding domain ACRAD_RS06915 PF02601 Exonuclease VII, large subunit ACRAD_RS06940 PF07690 Major Facilitator Superfamily ACRAD_RS06950 PF01144 Coenzyme A transferase ACRAD_RS06955 PF01144 Coenzyme A transferase ACRAD_RS06960 PF07690 Major Facilitator Superfamily ACRAD_RS06965 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACRAD_RS06965 PF02770 Acyl-CoA dehydrogenase, middle domain ACRAD_RS06965 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACRAD_RS06970 PF00108 Thiolase, N-terminal domain ACRAD_RS06970 PF02803 Thiolase, C-terminal domain ACRAD_RS06975 PF09339 IclR helix-turn-helix domain ACRAD_RS06980 PF02515 CoA-transferase family III ACRAD_RS06985 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACRAD_RS06985 PF02770 Acyl-CoA dehydrogenase, middle domain ACRAD_RS06985 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACRAD_RS06990 PF07690 Major Facilitator Superfamily ACRAD_RS06995 PF07690 Major Facilitator Superfamily ACRAD_RS07000 PF09339 IclR helix-turn-helix domain ACRAD_RS07005 PF02515 CoA-transferase family III ACRAD_RS07010 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACRAD_RS07010 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACRAD_RS07010 PF02770 Acyl-CoA dehydrogenase, middle domain ACRAD_RS07015 PF07690 Major Facilitator Superfamily ACRAD_RS07045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACRAD_RS07045 PF03466 LysR substrate binding domain ACRAD_RS07050 PF03788 LrgA family ACRAD_RS07055 PF04172 LrgB-like family ACRAD_RS07060 PF02654 Cobalamin-5-phosphate synthase ACRAD_RS07065 PF00300 Histidine phosphatase superfamily (branch 1) ACRAD_RS07070 PF02277 Phosphoribosyltransferase ACRAD_RS07075 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase ACRAD_RS07095 PF13737 Transposase DDE domain ACRAD_RS07120 PF04073 Aminoacyl-tRNA editing domain ACRAD_RS07160 PF01654 Cytochrome bd terminal oxidase subunit I ACRAD_RS07165 PF02322 Cytochrome bd terminal oxidase subunit II ACRAD_RS07170 PF08173 Membrane bound YbgT-like protein ACRAD_RS07190 PF02881 SRP54-type protein, helical bundle domain ACRAD_RS07190 PF00448 SRP54-type protein, GTPase domain ACRAD_RS07195 PF05193 Peptidase M16 inactive domain ACRAD_RS07195 PF00675 Insulinase (Peptidase family M16) ACRAD_RS07225 PF00571 CBS domain ACRAD_RS07225 PF01380 SIS domain ACRAD_RS07230 PF00291 Pyridoxal-phosphate dependent enzyme ACRAD_RS07240 PF17871 AAA lid domain ACRAD_RS07240 PF07724 AAA domain (Cdc48 subfamily) ACRAD_RS07240 PF00004 ATPase family associated with various cellular activities (AAA) ACRAD_RS07240 PF02861 Clp amino terminal domain, pathogenicity island component ACRAD_RS07240 PF10431 C-terminal, D2-small domain, of ClpB protein ACRAD_RS07250 PF05166 YcgL domain ACRAD_RS07255 PF00570 HRDC domain ACRAD_RS07255 PF01612 3'-5' exonuclease ACRAD_RS07260 PF13662 Toprim domain ACRAD_RS07260 PF02132 RecR protein ACRAD_RS07265 PF02575 YbaB/EbfC DNA-binding family ACRAD_RS07270 PF01053 Cys/Met metabolism PLP-dependent enzyme ACRAD_RS07280 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ACRAD_RS07280 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ACRAD_RS07285 PF01758 Sodium Bile acid symporter family ACRAD_RS07290 PF01022 Bacterial regulatory protein, arsR family ACRAD_RS07295 PF03960 ArsC family ACRAD_RS07335 PF00313 'Cold-shock' DNA-binding domain ACRAD_RS07340 PF03279 Bacterial lipid A biosynthesis acyltransferase ACRAD_RS07355 PF01230 HIT domain ACRAD_RS07380 PF02684 Lipid-A-disaccharide synthetase ACRAD_RS07385 PF07715 TonB-dependent Receptor Plug Domain ACRAD_RS07385 PF00593 TonB dependent receptor ACRAD_RS07400 PF01925 Sulfite exporter TauE/SafE ACRAD_RS07405 PF00793 DAHP synthetase I family ACRAD_RS07415 PF02542 YgbB family ACRAD_RS07430 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ACRAD_RS07435 PF04977 Septum formation initiator ACRAD_RS07440 PF00113 Enolase, C-terminal TIM barrel domain ACRAD_RS07440 PF03952 Enolase, N-terminal domain ACRAD_RS07445 PF00793 DAHP synthetase I family ACRAD_RS07450 PF06418 CTP synthase N-terminus ACRAD_RS07450 PF00117 Glutamine amidotransferase class-I ACRAD_RS07475 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACRAD_RS07475 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ACRAD_RS07485 PF00561 alpha/beta hydrolase fold ACRAD_RS07490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACRAD_RS07490 PF03466 LysR substrate binding domain ACRAD_RS07495 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ACRAD_RS07495 PF13378 Enolase C-terminal domain-like ACRAD_RS07500 PF02426 Muconolactone delta-isomerase ACRAD_RS07505 PF04444 Catechol dioxygenase N terminus ACRAD_RS07505 PF00775 Dioxygenase ACRAD_RS07510 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ACRAD_RS07510 PF00355 Rieske [2Fe-2S] domain ACRAD_RS07515 PF00866 Ring hydroxylating beta subunit ACRAD_RS07520 PF00970 Oxidoreductase FAD-binding domain ACRAD_RS07520 PF00111 2Fe-2S iron-sulfur cluster binding domain ACRAD_RS07520 PF00175 Oxidoreductase NAD-binding domain ACRAD_RS07525 PF00106 short chain dehydrogenase ACRAD_RS07530 PF03594 Benzoate membrane transport protein ACRAD_RS07535 PF01144 Coenzyme A transferase ACRAD_RS07540 PF01144 Coenzyme A transferase ACRAD_RS07545 PF00108 Thiolase, N-terminal domain ACRAD_RS07545 PF02803 Thiolase, C-terminal domain ACRAD_RS07550 PF12146 Serine aminopeptidase, S33 ACRAD_RS07555 PF07690 Major Facilitator Superfamily ACRAD_RS07565 PF00083 Sugar (and other) transporter ACRAD_RS07570 PF12697 Alpha/beta hydrolase family ACRAD_RS07580 PF02146 Sir2 family ACRAD_RS07585 PF00512 His Kinase A (phospho-acceptor) domain ACRAD_RS07585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACRAD_RS07585 PF00672 HAMP domain ACRAD_RS07590 PF00072 Response regulator receiver domain ACRAD_RS07590 PF00486 Transcriptional regulatory protein, C terminal ACRAD_RS07600 PF00576 HIUase/Transthyretin family ACRAD_RS07605 PF00593 TonB dependent receptor ACRAD_RS07605 PF07715 TonB-dependent Receptor Plug Domain ACRAD_RS07610 PF05958 tRNA (Uracil-5-)-methyltransferase ACRAD_RS07620 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ACRAD_RS07620 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ACRAD_RS07625 PF00860 Permease family ACRAD_RS07630 PF01613 Flavin reductase like domain ACRAD_RS07635 PF01042 Endoribonuclease L-PSP ACRAD_RS07640 PF00857 Isochorismatase family ACRAD_RS07645 PF00296 Luciferase-like monooxygenase ACRAD_RS07650 PF00881 Nitroreductase family ACRAD_RS07655 PF12697 Alpha/beta hydrolase family ACRAD_RS07670 PF00749 tRNA synthetases class I (E and Q), catalytic domain ACRAD_RS07670 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain ACRAD_RS07675 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ACRAD_RS07680 PF00149 Calcineurin-like phosphoesterase ACRAD_RS07685 PF00881 Nitroreductase family ACRAD_RS07695 PF01116 Fructose-bisphosphate aldolase class-II ACRAD_RS07705 PF00162 Phosphoglycerate kinase ACRAD_RS07715 PF02545 Maf-like protein ACRAD_RS07720 PF08007 Cupin superfamily protein ACRAD_RS07725 PF01645 Conserved region in glutamate synthase ACRAD_RS07730 PF03848 Tellurite resistance protein TehB ACRAD_RS07730 PF09313 Domain of unknown function (DUF1971) ACRAD_RS07745 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ACRAD_RS07745 PF01565 FAD binding domain ACRAD_RS07750 PF01451 Low molecular weight phosphotyrosine protein phosphatase ACRAD_RS07755 PF00465 Iron-containing alcohol dehydrogenase ACRAD_RS07760 PF03061 Thioesterase superfamily ACRAD_RS07765 PF12169 DNA polymerase III subunits gamma and tau domain III ACRAD_RS07765 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding ACRAD_RS07765 PF12170 DNA polymerase III tau subunit V interacting with alpha ACRAD_RS07770 PF05175 Methyltransferase small domain ACRAD_RS07775 PF00144 Beta-lactamase ACRAD_RS07790 PF00108 Thiolase, N-terminal domain ACRAD_RS07790 PF02803 Thiolase, C-terminal domain ACRAD_RS07800 PF03466 LysR substrate binding domain ACRAD_RS07800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACRAD_RS07805 PF00923 Transaldolase/Fructose-6-phosphate aldolase ACRAD_RS07810 PF01810 LysE type translocator ACRAD_RS07815 PF03594 Benzoate membrane transport protein ACRAD_RS07820 PF00893 Small Multidrug Resistance protein ACRAD_RS07835 PF00582 Universal stress protein family ACRAD_RS07840 PF11940 Domain of unknown function (DUF3458) Ig-like fold ACRAD_RS07840 PF17432 Domain of unknown function (DUF3458_C) ARM repeats ACRAD_RS07840 PF01433 Peptidase family M1 domain ACRAD_RS07850 PF02110 Hydroxyethylthiazole kinase family ACRAD_RS07860 PF05970 PIF1-like helicase ACRAD_RS07860 PF14493 Helix-turn-helix domain ACRAD_RS07865 PF00465 Iron-containing alcohol dehydrogenase ACRAD_RS07880 PF00171 Aldehyde dehydrogenase family ACRAD_RS07885 PF13520 Amino acid permease ACRAD_RS07890 PF06751 Ethanolamine ammonia lyase large subunit (EutB) ACRAD_RS07895 PF05985 Ethanolamine ammonia-lyase light chain (EutC) ACRAD_RS07900 PF02540 NAD synthase ACRAD_RS07900 PF00958 GMP synthase C terminal domain ACRAD_RS07900 PF00117 Glutamine amidotransferase class-I ACRAD_RS07905 PF04264 YceI-like domain ACRAD_RS07915 PF00456 Transketolase, thiamine diphosphate binding domain ACRAD_RS07915 PF02779 Transketolase, pyrimidine binding domain ACRAD_RS07915 PF02780 Transketolase, C-terminal domain ACRAD_RS07920 PF00438 S-adenosylmethionine synthetase, N-terminal domain ACRAD_RS07920 PF02772 S-adenosylmethionine synthetase, central domain ACRAD_RS07920 PF02773 S-adenosylmethionine synthetase, C-terminal domain ACRAD_RS07940 PF02075 Crossover junction endodeoxyribonuclease RuvC ACRAD_RS07950 PF01256 Carbohydrate kinase ACRAD_RS07950 PF03853 YjeF-related protein N-terminus ACRAD_RS07955 PF08331 Domain of unknown function (DUF1730) ACRAD_RS07960 PF06968 Biotin and Thiamin Synthesis associated domain ACRAD_RS07960 PF04055 Radical SAM superfamily ACRAD_RS07985 PF01709 Transcriptional regulator ACRAD_RS08000 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ACRAD_RS08000 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACRAD_RS08005 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACRAD_RS08005 PF02770 Acyl-CoA dehydrogenase, middle domain ACRAD_RS08005 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ACRAD_RS08010 PF00296 Luciferase-like monooxygenase ACRAD_RS08015 PF03180 NLPA lipoprotein ACRAD_RS08020 PF03180 NLPA lipoprotein ACRAD_RS08025 PF00005 ABC transporter ACRAD_RS08025 PF09383 NIL domain ACRAD_RS08030 PF00528 Binding-protein-dependent transport system inner membrane component ACRAD_RS08035 PF06071 Protein of unknown function (DUF933) ACRAD_RS08035 PF01926 50S ribosome-binding GTPase ACRAD_RS08050 PF03591 AzlC protein ACRAD_RS08055 PF05437 Branched-chain amino acid transport protein (AzlD) ACRAD_RS08060 PF02222 ATP-grasp domain ACRAD_RS08065 PF01909 Nucleotidyltransferase domain ACRAD_RS08065 PF01966 HD domain ACRAD_RS08065 PF08335 GlnD PII-uridylyltransferase ACRAD_RS08070 PF00155 Aminotransferase class I and II ACRAD_RS08075 PF00255 Glutathione peroxidase ACRAD_RS08080 PF01641 SelR domain ACRAD_RS08085 PF00155 Aminotransferase class I and II ACRAD_RS08090 PF03180 NLPA lipoprotein ACRAD_RS08095 PF09383 NIL domain ACRAD_RS08095 PF00005 ABC transporter ACRAD_RS08100 PF00528 Binding-protein-dependent transport system inner membrane component ACRAD_RS08105 PF02811 PHP domain ACRAD_RS08105 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ACRAD_RS08105 PF07733 Bacterial DNA polymerase III alpha NTPase domain ACRAD_RS08105 PF01336 OB-fold nucleic acid binding domain ACRAD_RS08105 PF14579 Helix-hairpin-helix motif ACRAD_RS08110 PF00588 SpoU rRNA Methylase family ACRAD_RS08115 PF00132 Bacterial transferase hexapeptide (six repeats) ACRAD_RS08135 PF01327 Polypeptide deformylase ACRAD_RS08150 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ACRAD_RS08150 PF00205 Thiamine pyrophosphate enzyme, central domain ACRAD_RS08150 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ACRAD_RS08155 PF00171 Aldehyde dehydrogenase family ACRAD_RS08160 PF03447 Homoserine dehydrogenase, NAD binding domain ACRAD_RS08160 PF01958 Domain of unknown function DUF108 ACRAD_RS08170 PF12697 Alpha/beta hydrolase family ACRAD_RS08180 PF07690 Major Facilitator Superfamily ACRAD_RS08185 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACRAD_RS08185 PF14759 Reductase C-terminal ACRAD_RS08190 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ACRAD_RS08200 PF00355 Rieske [2Fe-2S] domain ACRAD_RS08210 PF00355 Rieske [2Fe-2S] domain ACRAD_RS08215 PF09339 IclR helix-turn-helix domain ACRAD_RS08215 PF01614 Bacterial transcriptional regulator ACRAD_RS08220 PF00355 Rieske [2Fe-2S] domain ACRAD_RS08220 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ACRAD_RS08225 PF00866 Ring hydroxylating beta subunit ACRAD_RS08230 PF00970 Oxidoreductase FAD-binding domain ACRAD_RS08230 PF00111 2Fe-2S iron-sulfur cluster binding domain ACRAD_RS08230 PF00175 Oxidoreductase NAD-binding domain ACRAD_RS08235 PF00775 Dioxygenase ACRAD_RS08235 PF04444 Catechol dioxygenase N terminus ACRAD_RS08240 PF07690 Major Facilitator Superfamily ACRAD_RS08245 PF06719 AraC-type transcriptional regulator N-terminus ACRAD_RS08245 PF12833 Helix-turn-helix domain ACRAD_RS08255 PF03466 LysR substrate binding domain ACRAD_RS08255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACRAD_RS08270 PF00698 Acyl transferase domain ACRAD_RS08275 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG ACRAD_RS08285 PF01039 Carboxyl transferase domain ACRAD_RS08290 PF06857 Malonate decarboxylase delta subunit (MdcD) ACRAD_RS08295 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase ACRAD_RS08300 PF16957 Malonate decarboxylase, alpha subunit, transporter ACRAD_RS08310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACRAD_RS08310 PF03466 LysR substrate binding domain ACRAD_RS08315 PF18019 HD domain ACRAD_RS08335 PF09615 CRISPR-associated protein (Cas_Csy3) ACRAD_RS08345 PF01867 CRISPR associated protein Cas1 ACRAD_RS08350 PF08448 PAS fold ACRAD_RS08350 PF00990 Diguanylate cyclase, GGDEF domain ACRAD_RS08355 PF01810 LysE type translocator ACRAD_RS08360 PF01613 Flavin reductase like domain ACRAD_RS08365 PF01717 Cobalamin-independent synthase, Catalytic domain ACRAD_RS08365 PF08267 Cobalamin-independent synthase, N-terminal domain ACRAD_RS08390 PF00593 TonB dependent receptor ACRAD_RS08390 PF07715 TonB-dependent Receptor Plug Domain ACRAD_RS08395 PF13737 Transposase DDE domain ACRAD_RS08410 PF03466 LysR substrate binding domain ACRAD_RS08410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACRAD_RS08420 PF07690 Major Facilitator Superfamily ACRAD_RS08425 PF13193 AMP-binding enzyme C-terminal domain ACRAD_RS08425 PF00501 AMP-binding enzyme ACRAD_RS08430 PF02770 Acyl-CoA dehydrogenase, middle domain ACRAD_RS08430 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACRAD_RS08430 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACRAD_RS08435 PF00378 Enoyl-CoA hydratase/isomerase ACRAD_RS08445 PF01047 MarR family ACRAD_RS08465 PF00593 TonB dependent receptor ACRAD_RS08465 PF07715 TonB-dependent Receptor Plug Domain ACRAD_RS08475 PF03737 Aldolase/RraA ACRAD_RS08485 PF04183 IucA / IucC family ACRAD_RS08485 PF06276 Ferric iron reductase FhuF-like transporter ACRAD_RS08490 PF04183 IucA / IucC family ACRAD_RS08490 PF06276 Ferric iron reductase FhuF-like transporter ACRAD_RS08500 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) ACRAD_RS08505 PF06276 Ferric iron reductase FhuF-like transporter ACRAD_RS08505 PF04183 IucA / IucC family ACRAD_RS08510 PF00376 MerR family regulatory protein ACRAD_RS08510 PF09278 MerR, DNA binding ACRAD_RS08515 PF00403 Heavy-metal-associated domain ACRAD_RS08525 PF05188 MutS domain II ACRAD_RS08525 PF05190 MutS family domain IV ACRAD_RS08525 PF05192 MutS domain III ACRAD_RS08525 PF01624 MutS domain I ACRAD_RS08525 PF00488 MutS domain V ACRAD_RS08530 PF11953 Domain of unknown function (DUF3470) ACRAD_RS08530 PF00037 4Fe-4S binding domain ACRAD_RS08540 PF01596 O-methyltransferase ACRAD_RS08555 PF01205 Uncharacterized protein family UPF0029 ACRAD_RS08555 PF09186 Domain of unknown function (DUF1949) ACRAD_RS08565 PF00005 ABC transporter ACRAD_RS08565 PF00664 ABC transporter transmembrane region ACRAD_RS08565 PF03412 Peptidase C39 family ACRAD_RS08570 PF02321 Outer membrane efflux protein ACRAD_RS08575 PF12399 Branched-chain amino acid ATP-binding cassette transporter ACRAD_RS08575 PF00005 ABC transporter ACRAD_RS08580 PF03968 OstA-like protein ACRAD_RS08595 PF00571 CBS domain ACRAD_RS08595 PF01380 SIS domain ACRAD_RS08600 PF01406 tRNA synthetases class I (C) catalytic domain ACRAD_RS08600 PF09190 DALR domain ACRAD_RS08610 PF04463 Protein of unknown function (DUF523) ACRAD_RS08615 PF07969 Amidohydrolase family ACRAD_RS08620 PF01979 Amidohydrolase family ACRAD_RS08625 PF00753 Metallo-beta-lactamase superfamily ACRAD_RS08630 PF13737 Transposase DDE domain ACRAD_RS08635 PF01717 Cobalamin-independent synthase, Catalytic domain ACRAD_RS08640 PF00990 Diguanylate cyclase, GGDEF domain ACRAD_RS08640 PF00563 EAL domain ACRAD_RS08640 PF03707 Bacterial signalling protein N terminal repeat ACRAD_RS08655 PF02492 CobW/HypB/UreG, nucleotide-binding domain ACRAD_RS08660 PF01730 UreF ACRAD_RS08665 PF05194 UreE urease accessory protein, C-terminal domain ACRAD_RS08665 PF02814 UreE urease accessory protein, N-terminal domain ACRAD_RS08680 PF01979 Amidohydrolase family ACRAD_RS08680 PF00449 Urease alpha-subunit, N-terminal domain ACRAD_RS08685 PF00699 Urease beta subunit ACRAD_RS08690 PF00547 Urease, gamma subunit ACRAD_RS08695 PF01774 UreD urease accessory protein ACRAD_RS08700 PF00324 Amino acid permease ACRAD_RS08705 PF00171 Aldehyde dehydrogenase family ACRAD_RS08710 PF01613 Flavin reductase like domain ACRAD_RS08715 PF00171 Aldehyde dehydrogenase family ACRAD_RS08720 PF00753 Metallo-beta-lactamase superfamily ACRAD_RS08730 PF04143 Sulphur transport ACRAD_RS08735 PF11412 Disulphide bond corrector protein DsbC ACRAD_RS08735 PF02683 Cytochrome C biogenesis protein transmembrane region ACRAD_RS08740 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ACRAD_RS08740 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ACRAD_RS08745 PF00171 Aldehyde dehydrogenase family ACRAD_RS08750 PF00202 Aminotransferase class-III ACRAD_RS08755 PF00171 Aldehyde dehydrogenase family ACRAD_RS08765 PF07729 FCD domain ACRAD_RS08765 PF00392 Bacterial regulatory proteins, gntR family ACRAD_RS08775 PF00324 Amino acid permease ACRAD_RS08780 PF01266 FAD dependent oxidoreductase ACRAD_RS08790 PF00392 Bacterial regulatory proteins, gntR family ACRAD_RS08790 PF00155 Aminotransferase class I and II ACRAD_RS08795 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ACRAD_RS08795 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ACRAD_RS08800 PF00270 DEAD/DEAH box helicase ACRAD_RS08800 PF04408 Helicase associated domain (HA2) ACRAD_RS08800 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold ACRAD_RS08800 PF00271 Helicase conserved C-terminal domain ACRAD_RS08800 PF11898 Domain of unknown function (DUF3418) ACRAD_RS08805 PF00578 AhpC/TSA family ACRAD_RS08805 PF10417 C-terminal domain of 1-Cys peroxiredoxin ACRAD_RS08825 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACRAD_RS08825 PF13192 Thioredoxin domain ACRAD_RS08845 PF03883 Peroxide stress protein YaaA ACRAD_RS08860 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ACRAD_RS08865 PF01842 ACT domain ACRAD_RS08865 PF01817 Chorismate mutase type II ACRAD_RS08865 PF00800 Prephenate dehydratase ACRAD_RS08870 PF00501 AMP-binding enzyme ACRAD_RS08870 PF13193 AMP-binding enzyme C-terminal domain ACRAD_RS08875 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACRAD_RS08875 PF02770 Acyl-CoA dehydrogenase, middle domain ACRAD_RS08875 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACRAD_RS08880 PF00375 Sodium:dicarboxylate symporter family ACRAD_RS08885 PF00591 Glycosyl transferase family, a/b domain ACRAD_RS08885 PF02885 Glycosyl transferase family, helical bundle domain ACRAD_RS08895 PF07023 Protein of unknown function (DUF1315) ACRAD_RS08900 PF01513 ATP-NAD kinase ACRAD_RS08905 PF00905 Penicillin binding protein transpeptidase domain ACRAD_RS08905 PF14814 Bifunctional transglycosylase second domain ACRAD_RS08905 PF00912 Transglycosylase ACRAD_RS08915 PF00293 NUDIX domain ACRAD_RS08925 PF00512 His Kinase A (phospho-acceptor) domain ACRAD_RS08925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACRAD_RS08925 PF08521 Two-component sensor kinase N-terminal ACRAD_RS08930 PF00486 Transcriptional regulatory protein, C terminal ACRAD_RS08930 PF00072 Response regulator receiver domain ACRAD_RS08935 PF04076 Bacterial OB fold (BOF) protein ACRAD_RS08940 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ACRAD_RS08940 PF00437 Type II/IV secretion system protein ACRAD_RS08945 PF00990 Diguanylate cyclase, GGDEF domain ACRAD_RS08945 PF13185 GAF domain ACRAD_RS08950 PF18389 TrmO C-terminal domain ACRAD_RS08950 PF01980 tRNA-methyltransferase O ACRAD_RS08955 PF00970 Oxidoreductase FAD-binding domain ACRAD_RS08955 PF00175 Oxidoreductase NAD-binding domain ACRAD_RS08960 PF01136 Peptidase family U32 ACRAD_RS08960 PF16325 Peptidase family U32 C-terminal domain ACRAD_RS08965 PF00037 4Fe-4S binding domain ACRAD_RS08970 PF13192 Thioredoxin domain ACRAD_RS08970 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACRAD_RS08980 PF05816 Toxic anion resistance protein (TelA) ACRAD_RS08990 PF01272 Transcription elongation factor, GreA/GreB, C-term ACRAD_RS08990 PF14760 Rnk N-terminus ACRAD_RS09005 PF00464 Serine hydroxymethyltransferase ACRAD_RS09170 PF07030 Protein of unknown function (DUF1320) ACRAD_RS09215 PF03592 Terminase small subunit ACRAD_RS09255 PF05866 Endodeoxyribonuclease RusA ACRAD_RS09285 PF00772 DnaB-like helicase N terminal domain ACRAD_RS09285 PF03796 DnaB-like helicase C terminal domain ACRAD_RS09305 PF00717 Peptidase S24-like ACRAD_RS09305 PF01381 Helix-turn-helix ACRAD_RS09315 PF00872 Transposase, Mutator family ACRAD_RS09365 PF13356 Arm DNA-binding domain ACRAD_RS09365 PF00589 Phage integrase family ACRAD_RS09375 PF00005 ABC transporter ACRAD_RS09380 PF01061 ABC-2 type transporter ACRAD_RS09385 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term ACRAD_RS09385 PF14489 QueF-like protein ACRAD_RS09395 PF01098 Cell cycle protein ACRAD_RS09400 PF13406 Transglycosylase SLT domain ACRAD_RS09405 PF03330 Lytic transglycolase ACRAD_RS09405 PF05036 Sporulation related domain ACRAD_RS09415 PF00889 Elongation factor TS ACRAD_RS09420 PF00318 Ribosomal protein S2 ACRAD_RS09425 PF00557 Metallopeptidase family M24 ACRAD_RS09440 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ACRAD_RS09440 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACRAD_RS09445 PF04055 Radical SAM superfamily ACRAD_RS09450 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACRAD_RS09450 PF09317 Domain of unknown function (DUF1974) ACRAD_RS09450 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACRAD_RS09450 PF02770 Acyl-CoA dehydrogenase, middle domain ACRAD_RS09455 PF00872 Transposase, Mutator family ACRAD_RS09465 PF04143 Sulphur transport ACRAD_RS09485 PF03060 Nitronate monooxygenase ACRAD_RS09490 PF01207 Dihydrouridine synthase (Dus) ACRAD_RS09500 PF00990 Diguanylate cyclase, GGDEF domain ACRAD_RS09500 PF17158 Membrane-associated sensor, integral membrane domain ACRAD_RS09505 PF03471 Transporter associated domain ACRAD_RS09505 PF03741 Integral membrane protein TerC family ACRAD_RS09515 PF03069 Acetamidase/Formamidase family ACRAD_RS09520 PF07759 Protein of unknown function (DUF1615) ACRAD_RS09530 PF00696 Amino acid kinase family ACRAD_RS09530 PF01472 PUA domain ACRAD_RS09535 PF01018 GTP1/OBG ACRAD_RS09535 PF01926 50S ribosome-binding GTPase ACRAD_RS09550 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ACRAD_RS09550 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ACRAD_RS09555 PF00892 EamA-like transporter family ACRAD_RS09560 PF08212 Lipocalin-like domain ACRAD_RS09565 PF00271 Helicase conserved C-terminal domain ACRAD_RS09565 PF04851 Type III restriction enzyme, res subunit ACRAD_RS09565 PF12344 Ultra-violet resistance protein B ACRAD_RS09565 PF02151 UvrB/uvrC motif ACRAD_RS09565 PF17757 UvrB interaction domain ACRAD_RS09575 PF00990 Diguanylate cyclase, GGDEF domain ACRAD_RS09575 PF08448 PAS fold ACRAD_RS09580 PF00155 Aminotransferase class I and II ACRAD_RS09585 PF01638 HxlR-like helix-turn-helix ACRAD_RS09605 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) ACRAD_RS09610 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ACRAD_RS09615 PF02565 Recombination protein O C terminal ACRAD_RS09615 PF11967 Recombination protein O N terminal ACRAD_RS09625 PF01926 50S ribosome-binding GTPase ACRAD_RS09625 PF07650 KH domain ACRAD_RS09630 PF14622 Ribonuclease-III-like ACRAD_RS09630 PF00035 Double-stranded RNA binding motif ACRAD_RS09640 PF10502 Signal peptidase, peptidase S26 ACRAD_RS09645 PF00009 Elongation factor Tu GTP binding domain ACRAD_RS09645 PF06421 GTP-binding protein LepA C-terminus ACRAD_RS09645 PF00679 Elongation factor G C-terminus ACRAD_RS09645 PF03144 Elongation factor Tu domain 2 ACRAD_RS09655 PF13180 PDZ domain ACRAD_RS09660 PF00890 FAD binding domain ACRAD_RS09660 PF02910 Fumarate reductase flavoprotein C-term ACRAD_RS09665 PF02223 Thymidylate kinase ACRAD_RS09670 PF02618 YceG-like family ACRAD_RS09675 PF01063 Amino-transferase class IV ACRAD_RS09690 PF00528 Binding-protein-dependent transport system inner membrane component ACRAD_RS09695 PF00528 Binding-protein-dependent transport system inner membrane component ACRAD_RS09700 PF00005 ABC transporter ACRAD_RS09700 PF12857 TOBE-like domain ACRAD_RS09705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACRAD_RS09705 PF03466 LysR substrate binding domain ACRAD_RS09715 PF14602 Hexapeptide repeat of succinyl-transferase ACRAD_RS09715 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal ACRAD_RS09715 PF00132 Bacterial transferase hexapeptide (six repeats) ACRAD_RS09720 PF04055 Radical SAM superfamily ACRAD_RS09725 PF06508 Queuosine biosynthesis protein QueC ACRAD_RS09735 PF00578 AhpC/TSA family ACRAD_RS09740 PF00293 NUDIX domain ACRAD_RS09740 PF01467 Cytidylyltransferase-like ACRAD_RS09745 PF00378 Enoyl-CoA hydratase/isomerase ACRAD_RS09755 PF01784 NIF3 (NGG1p interacting factor 3) ACRAD_RS09760 PF00106 short chain dehydrogenase ACRAD_RS09765 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ACRAD_RS09765 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal ACRAD_RS09765 PF02769 AIR synthase related protein, C-terminal domain ACRAD_RS09770 PF01966 HD domain ACRAD_RS09775 PF07499 RuvA, C-terminal domain ACRAD_RS09775 PF01330 RuvA N terminal domain ACRAD_RS09780 PF05491 RuvB C-terminal winged helix domain ACRAD_RS09780 PF05496 Holliday junction DNA helicase RuvB P-loop domain ACRAD_RS09780 PF17864 RuvB AAA lid domain ACRAD_RS09785 PF00743 Flavin-binding monooxygenase-like ACRAD_RS09790 PF00106 short chain dehydrogenase ACRAD_RS09800 PF03061 Thioesterase superfamily ACRAD_RS09805 PF01618 MotA/TolQ/ExbB proton channel family ACRAD_RS09810 PF02472 Biopolymer transport protein ExbD/TolR ACRAD_RS09820 PF07676 WD40-like Beta Propeller Repeat ACRAD_RS09820 PF04052 TolB amino-terminal domain ACRAD_RS09825 PF00691 OmpA family ACRAD_RS09835 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain ACRAD_RS09840 PF00588 SpoU rRNA Methylase family ACRAD_RS09840 PF08032 RNA 2'-O ribose methyltransferase substrate binding ACRAD_RS09875 PF11638 DnaA N-terminal domain ACRAD_RS09875 PF00308 Bacterial dnaA protein ACRAD_RS09875 PF08299 Bacterial dnaA protein helix-turn-helix ACRAD_RS09880 PF01594 AI-2E family transporter ACRAD_RS09885 PF00586 AIR synthase related protein, N-terminal domain ACRAD_RS09885 PF02769 AIR synthase related protein, C-terminal domain ACRAD_RS09890 PF00551 Formyl transferase ACRAD_RS09900 PF01343 Peptidase family S49 ACRAD_RS09900 PF06965 Na+/H+ antiporter 1 ACRAD_RS09910 PF13567 Domain of unknown function (DUF4131) ACRAD_RS09910 PF00753 Metallo-beta-lactamase superfamily ACRAD_RS09910 PF03772 Competence protein ACRAD_RS09915 PF00005 ABC transporter ACRAD_RS09920 PF12704 MacB-like periplasmic core domain ACRAD_RS09920 PF02687 FtsX-like permease family ACRAD_RS09935 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 ACRAD_RS09945 PF00266 Aminotransferase class-V ACRAD_RS09955 PF13533 Biotin-lipoyl like ACRAD_RS09970 PF00521 DNA gyrase/topoisomerase IV, subunit A ACRAD_RS09970 PF03989 DNA gyrase C-terminal domain, beta-propeller ACRAD_RS09975 PF01012 Electron transfer flavoprotein domain ACRAD_RS09975 PF00766 Electron transfer flavoprotein FAD-binding domain ACRAD_RS09980 PF01012 Electron transfer flavoprotein domain ACRAD_RS09985 PF01810 LysE type translocator ACRAD_RS09990 PF01037 Lrp/AsnC ligand binding domain ACRAD_RS10000 PF02899 Phage integrase, N-terminal SAM-like domain ACRAD_RS10000 PF00589 Phage integrase family ACRAD_RS10005 PF01678 Diaminopimelate epimerase ACRAD_RS10010 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ACRAD_RS10010 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ACRAD_RS10020 PF00324 Amino acid permease ACRAD_RS10025 PF18073 Rubredoxin metal binding domain ACRAD_RS10035 PF00152 tRNA synthetases class II (D, K and N) ACRAD_RS10040 PF11890 Domain of unknown function (DUF3410) ACRAD_RS10040 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ACRAD_RS10040 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ACRAD_RS10045 PF00120 Glutamine synthetase, catalytic domain ACRAD_RS10050 PF00486 Transcriptional regulatory protein, C terminal ACRAD_RS10050 PF00072 Response regulator receiver domain ACRAD_RS10060 PF02669 K+-transporting ATPase, c chain ACRAD_RS10070 PF03814 Potassium-transporting ATPase A subunit ACRAD_RS10080 PF00324 Amino acid permease ACRAD_RS10085 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family ACRAD_RS10090 PF04996 Succinylarginine dihydrolase ACRAD_RS10095 PF00171 Aldehyde dehydrogenase family ACRAD_RS10100 PF04958 Arginine N-succinyltransferase beta subunit ACRAD_RS10105 PF00202 Aminotransferase class-III ACRAD_RS10110 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ACRAD_RS10110 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ACRAD_RS10125 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ACRAD_RS10125 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACRAD_RS10130 PF01565 FAD binding domain ACRAD_RS10130 PF09330 D-lactate dehydrogenase, membrane binding ACRAD_RS10135 PF01070 FMN-dependent dehydrogenase ACRAD_RS10140 PF07729 FCD domain ACRAD_RS10140 PF00392 Bacterial regulatory proteins, gntR family ACRAD_RS10145 PF02652 L-lactate permease ACRAD_RS10150 PF00764 Arginosuccinate synthase ACRAD_RS10155 PF00360 Phytochrome region ACRAD_RS10155 PF00563 EAL domain ACRAD_RS10155 PF01590 GAF domain ACRAD_RS10155 PF00990 Diguanylate cyclase, GGDEF domain ACRAD_RS10160 PF01979 Amidohydrolase family ACRAD_RS10165 PF00929 Exonuclease ACRAD_RS10180 PF00324 Amino acid permease ACRAD_RS10195 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ACRAD_RS10195 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACRAD_RS10200 PF00005 ABC transporter ACRAD_RS10200 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ACRAD_RS10205 PF12911 N-terminal TM domain of oligopeptide transport permease C ACRAD_RS10205 PF00528 Binding-protein-dependent transport system inner membrane component ACRAD_RS10210 PF00528 Binding-protein-dependent transport system inner membrane component ACRAD_RS10215 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ACRAD_RS10220 PF01476 LysM domain ACRAD_RS10220 PF01464 Transglycosylase SLT domain ACRAD_RS10220 PF01476 LysM domain ACRAD_RS10220 PF01464 Transglycosylase SLT domain ACRAD_RS10225 PF00929 Exonuclease ACRAD_RS10235 PF00293 NUDIX domain ACRAD_RS10235 PF09297 NADH pyrophosphatase zinc ribbon domain ACRAD_RS10245 PF04972 BON domain ACRAD_RS10250 PF02021 Uncharacterised protein family UPF0102 ACRAD_RS10255 PF04348 LppC putative lipoprotein ACRAD_RS10260 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ACRAD_RS10270 PF01494 FAD binding domain ACRAD_RS10275 PF01494 FAD binding domain ACRAD_RS10280 PF00557 Metallopeptidase family M24 ACRAD_RS10280 PF05195 Aminopeptidase P, N-terminal domain ACRAD_RS10285 PF03695 Uncharacterised protein family (UPF0149) ACRAD_RS10305 PF01037 Lrp/AsnC ligand binding domain ACRAD_RS10315 PF01925 Sulfite exporter TauE/SafE ACRAD_RS10325 PF00487 Fatty acid desaturase ACRAD_RS10330 PF12833 Helix-turn-helix domain ACRAD_RS10330 PF07883 Cupin domain ACRAD_RS10345 PF01812 5-formyltetrahydrofolate cyclo-ligase family ACRAD_RS10350 PF05362 Lon protease (S16) C-terminal proteolytic domain ACRAD_RS10350 PF00004 ATPase family associated with various cellular activities (AAA) ACRAD_RS10350 PF02190 ATP-dependent protease La (LON) substrate-binding domain ACRAD_RS10355 PF04389 Peptidase family M28 ACRAD_RS10360 PF02590 Predicted SPOUT methyltransferase ACRAD_RS10365 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ACRAD_RS10375 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ACRAD_RS10375 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ACRAD_RS10380 PF04060 Putative Fe-S cluster ACRAD_RS10385 PF00730 HhH-GPD superfamily base excision DNA repair protein ACRAD_RS10385 PF00633 Helix-hairpin-helix motif ACRAD_RS10385 PF10576 Iron-sulfur binding domain of endonuclease III ACRAD_RS10395 PF05191 Adenylate kinase, active site lid ACRAD_RS10410 PF03717 Penicillin-binding Protein dimerisation domain ACRAD_RS10410 PF00905 Penicillin binding protein transpeptidase domain ACRAD_RS10450 PF00463 Isocitrate lyase family ACRAD_RS10455 PF03466 LysR substrate binding domain ACRAD_RS10455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACRAD_RS10460 PF01595 Cyclin M transmembrane N-terminal domain ACRAD_RS10460 PF03471 Transporter associated domain ACRAD_RS10460 PF00571 CBS domain ACRAD_RS10470 PF14765 Polyketide synthase dehydratase ACRAD_RS10470 PF00550 Phosphopantetheine attachment site ACRAD_RS10470 PF08659 KR domain ACRAD_RS10470 PF08240 Alcohol dehydrogenase GroES-like domain ACRAD_RS10470 PF00698 Acyl transferase domain ACRAD_RS10475 PF03009 Glycerophosphoryl diester phosphodiesterase family ACRAD_RS10480 PF00009 Elongation factor Tu GTP binding domain ACRAD_RS10485 PF01507 Phosphoadenosine phosphosulfate reductase family ACRAD_RS10490 PF14052 Capsule assembly protein Wzi ACRAD_RS10495 PF01336 OB-fold nucleic acid binding domain ACRAD_RS10495 PF00152 tRNA synthetases class II (D, K and N) ACRAD_RS10505 PF00156 Phosphoribosyl transferase domain ACRAD_RS10510 PF00301 Rubredoxin ACRAD_RS10515 PF18113 Rubredoxin binding C-terminal domain ACRAD_RS10515 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACRAD_RS10520 PF00561 alpha/beta hydrolase fold ACRAD_RS10525 PF03466 LysR substrate binding domain ACRAD_RS10525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACRAD_RS10530 PF13090 Polyphosphate kinase C-terminal domain 2 ACRAD_RS10530 PF17941 Polyphosphate kinase C-terminal domain 1 ACRAD_RS10530 PF13089 Polyphosphate kinase N-terminal domain ACRAD_RS10530 PF02503 Polyphosphate kinase middle domain ACRAD_RS10535 PF00912 Transglycosylase ACRAD_RS10540 PF01694 Rhomboid family ACRAD_RS10550 PF00005 ABC transporter ACRAD_RS10555 PF13472 GDSL-like Lipase/Acylhydrolase family ACRAD_RS10560 PF00484 Carbonic anhydrase ACRAD_RS10565 PF00561 alpha/beta hydrolase fold ACRAD_RS10575 PF07715 TonB-dependent Receptor Plug Domain ACRAD_RS10575 PF00593 TonB dependent receptor ACRAD_RS10580 PF01106 NifU-like domain ACRAD_RS10580 PF01521 Iron-sulphur cluster biosynthesis ACRAD_RS10590 PF00884 Sulfatase ACRAD_RS10595 PF03781 Sulfatase-modifying factor enzyme 1 ACRAD_RS10605 PF01384 Phosphate transporter family ACRAD_RS10610 PF02310 B12 binding domain ACRAD_RS10610 PF02607 B12 binding domain ACRAD_RS10610 PF02965 Vitamin B12 dependent methionine synthase, activation domain ACRAD_RS10610 PF00809 Pterin binding enzyme ACRAD_RS10610 PF02574 Homocysteine S-methyltransferase ACRAD_RS10620 PF01494 FAD binding domain ACRAD_RS10625 PF07690 Major Facilitator Superfamily ACRAD_RS10625 PF00083 Sugar (and other) transporter ACRAD_RS10630 PF00067 Cytochrome P450 ACRAD_RS10640 PF00083 Sugar (and other) transporter ACRAD_RS10665 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ACRAD_RS10670 PF02308 MgtC family ACRAD_RS10675 PF07152 YaeQ protein ACRAD_RS10680 PF02492 CobW/HypB/UreG, nucleotide-binding domain ACRAD_RS10680 PF07683 Cobalamin synthesis protein cobW C-terminal domain ACRAD_RS10690 PF03061 Thioesterase superfamily ACRAD_RS10695 PF00732 GMC oxidoreductase ACRAD_RS10695 PF05199 GMC oxidoreductase ACRAD_RS10700 PF00171 Aldehyde dehydrogenase family ACRAD_RS10705 PF13977 BetI-type transcriptional repressor, C-terminal ACRAD_RS10705 PF00440 Bacterial regulatory proteins, tetR family ACRAD_RS10710 PF02028 BCCT, betaine/carnitine/choline family transporter ACRAD_RS10720 PF17954 Quercetinase C-terminal cupin domain ACRAD_RS10720 PF02678 Pirin ACRAD_RS10725 PF05275 Copper resistance protein B precursor (CopB) ACRAD_RS10730 PF00394 Multicopper oxidase ACRAD_RS10730 PF07732 Multicopper oxidase ACRAD_RS10730 PF07731 Multicopper oxidase ACRAD_RS10745 PF14497 Glutathione S-transferase, C-terminal domain ACRAD_RS10745 PF02798 Glutathione S-transferase, N-terminal domain ACRAD_RS10755 PF01144 Coenzyme A transferase ACRAD_RS10760 PF01144 Coenzyme A transferase ACRAD_RS10765 PF02667 Short chain fatty acid transporter ACRAD_RS10770 PF00108 Thiolase, N-terminal domain ACRAD_RS10770 PF02803 Thiolase, C-terminal domain ACRAD_RS10780 PF00582 Universal stress protein family ACRAD_RS10820 PF02661 Fic/DOC family ACRAD_RS10820 PF13784 Fic/DOC family N-terminal ACRAD_RS10840 PF02661 Fic/DOC family ACRAD_RS10840 PF13784 Fic/DOC family N-terminal ACRAD_RS10860 PF00872 Transposase, Mutator family ACRAD_RS10865 PF00872 Transposase, Mutator family ACRAD_RS10870 PF00004 ATPase family associated with various cellular activities (AAA) ACRAD_RS10870 PF06480 FtsH Extracellular ACRAD_RS10870 PF17862 AAA+ lid domain ACRAD_RS10870 PF01434 Peptidase family M41 ACRAD_RS10875 PF00012 Hsp70 protein ACRAD_RS10890 PF10544 T5orf172 domain ACRAD_RS10915 PF08241 Methyltransferase domain ACRAD_RS10955 PF13737 Transposase DDE domain ACRAD_RS10970 PF00589 Phage integrase family ACRAD_RS10970 PF13356 Arm DNA-binding domain ACRAD_RS10980 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ACRAD_RS10980 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ACRAD_RS10985 PF07690 Major Facilitator Superfamily ACRAD_RS10990 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ACRAD_RS10990 PF00529 HlyD membrane-fusion protein of T1SS ACRAD_RS10995 PF03061 Thioesterase superfamily ACRAD_RS11000 PF00490 Delta-aminolevulinic acid dehydratase ACRAD_RS11005 PF01266 FAD dependent oxidoreductase ACRAD_RS11010 PF01370 NAD dependent epimerase/dehydratase family ACRAD_RS11010 PF08338 Domain of unknown function (DUF1731) ACRAD_RS11020 PF12320 Type 5 capsule protein repressor C-terminal domain ACRAD_RS11020 PF00149 Calcineurin-like phosphoesterase ACRAD_RS11030 PF01168 Alanine racemase, N-terminal domain ACRAD_RS11035 PF00437 Type II/IV secretion system protein ACRAD_RS11040 PF00437 Type II/IV secretion system protein ACRAD_RS11045 PF01475 Ferric uptake regulator family ACRAD_RS11050 PF04355 SmpA / OmlA family ACRAD_RS11055 PF03658 RnfH family Ubiquitin ACRAD_RS11065 PF01814 Hemerythrin HHE cation binding domain ACRAD_RS11070 PF13230 Glutamine amidotransferases class-II ACRAD_RS11075 PF00696 Amino acid kinase family ACRAD_RS11080 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ACRAD_RS11080 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ACRAD_RS11080 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ACRAD_RS11080 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ACRAD_RS11085 PF00692 dUTPase ACRAD_RS11090 PF13361 UvrD-like helicase C-terminal domain ACRAD_RS11090 PF00580 UvrD/REP helicase N-terminal domain ACRAD_RS11095 PF13488 Glycine zipper ACRAD_RS11095 PF00691 OmpA family ACRAD_RS11100 PF01553 Acyltransferase ACRAD_RS11110 PF03775 Septum formation inhibitor MinC, C-terminal domain ACRAD_RS11115 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ACRAD_RS11120 PF03776 Septum formation topological specificity factor MinE ACRAD_RS11130 PF09397 Ftsk gamma domain ACRAD_RS11130 PF17854 FtsK alpha domain ACRAD_RS11130 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ACRAD_RS11130 PF01580 FtsK/SpoIIIE family ACRAD_RS11135 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACRAD_RS11140 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ACRAD_RS11145 PF04376 Arginine-tRNA-protein transferase, N terminus ACRAD_RS11145 PF04377 Arginine-tRNA-protein transferase, C terminus ACRAD_RS11150 PF00583 Acetyltransferase (GNAT) family ACRAD_RS11160 PF00009 Elongation factor Tu GTP binding domain ACRAD_RS11160 PF03144 Elongation factor Tu domain 2 ACRAD_RS11160 PF03143 Elongation factor Tu C-terminal domain ACRAD_RS11165 PF03144 Elongation factor Tu domain 2 ACRAD_RS11165 PF14492 Elongation Factor G, domain II ACRAD_RS11165 PF03764 Elongation factor G, domain IV ACRAD_RS11165 PF00009 Elongation factor Tu GTP binding domain ACRAD_RS11165 PF00679 Elongation factor G C-terminus ACRAD_RS11170 PF00177 Ribosomal protein S7p/S5e ACRAD_RS11175 PF00164 Ribosomal protein S12/S23 ACRAD_RS11185 PF00109 Beta-ketoacyl synthase, N-terminal domain ACRAD_RS11185 PF02801 Beta-ketoacyl synthase, C-terminal domain ACRAD_RS11190 PF03653 Uncharacterised protein family (UPF0093) ACRAD_RS11200 PF08543 Phosphomethylpyrimidine kinase ACRAD_RS11200 PF03070 TENA/THI-4/PQQC family ACRAD_RS11200 PF02581 Thiamine monophosphate synthase ACRAD_RS11205 PF01476 LysM domain ACRAD_RS11205 PF04972 BON domain ACRAD_RS11210 PF00550 Phosphopantetheine attachment site ACRAD_RS11220 PF00698 Acyl transferase domain ACRAD_RS11225 PF01783 Ribosomal L32p protein family ACRAD_RS11230 PF02620 Large ribosomal RNA subunit accumulation protein YceD ACRAD_RS11235 PF04315 Elongation factor P hydroxylase ACRAD_RS11240 PF01300 Telomere recombination ACRAD_RS11250 PF02616 Segregation and condensation protein ScpA ACRAD_RS11255 PF04079 Segregation and condensation complex subunit ScpB ACRAD_RS11260 PF00849 RNA pseudouridylate synthase ACRAD_RS11260 PF01479 S4 domain ACRAD_RS11275 PF00155 Aminotransferase class I and II ACRAD_RS11280 PF00202 Aminotransferase class-III ACRAD_RS11280 PF06968 Biotin and Thiamin Synthesis associated domain ACRAD_RS11280 PF04055 Radical SAM superfamily ACRAD_RS11285 PF08241 Methyltransferase domain ACRAD_RS11285 PF12697 Alpha/beta hydrolase family ACRAD_RS11290 PF00210 Ferritin-like domain ACRAD_RS11295 PF02358 Trehalose-phosphatase ACRAD_RS11300 PF00982 Glycosyltransferase family 20 ACRAD_RS11305 PF07690 Major Facilitator Superfamily ACRAD_RS11310 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ACRAD_RS11310 PF03120 NAD-dependent DNA ligase OB-fold domain ACRAD_RS11310 PF00533 BRCA1 C Terminus (BRCT) domain ACRAD_RS11310 PF01653 NAD-dependent DNA ligase adenylation domain ACRAD_RS11310 PF12826 Helix-hairpin-helix motif ACRAD_RS11320 PF06470 SMC proteins Flexible Hinge Domain ACRAD_RS11320 PF02463 RecF/RecN/SMC N terminal domain ACRAD_RS11330 PF01925 Sulfite exporter TauE/SafE ACRAD_RS11340 PF03309 Type III pantothenate kinase ACRAD_RS11345 PF06821 Serine hydrolase ACRAD_RS11350 PF00448 SRP54-type protein, GTPase domain ACRAD_RS11350 PF02978 Signal peptide binding domain ACRAD_RS11350 PF02881 SRP54-type protein, helical bundle domain ACRAD_RS11360 PF13649 Methyltransferase domain ACRAD_RS11365 PF01207 Dihydrouridine synthase (Dus) ACRAD_RS11395 PF00849 RNA pseudouridylate synthase ACRAD_RS11420 PF00694 Aconitase C-terminal domain ACRAD_RS11420 PF00330 Aconitase family (aconitate hydratase) ACRAD_RS11435 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ACRAD_RS11440 PF02245 Methylpurine-DNA glycosylase (MPG) ACRAD_RS11445 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ACRAD_RS11445 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ACRAD_RS11445 PF06827 Zinc finger found in FPG and IleRS ACRAD_RS11455 PF01741 Large-conductance mechanosensitive channel, MscL ACRAD_RS11460 PF00009 Elongation factor Tu GTP binding domain ACRAD_RS11460 PF00679 Elongation factor G C-terminus ACRAD_RS11460 PF03144 Elongation factor Tu domain 2 ACRAD_RS11465 PF00860 Permease family ACRAD_RS11470 PF05175 Methyltransferase small domain ACRAD_RS11470 PF08468 Methyltransferase small domain N-terminal ACRAD_RS11475 PF00324 Amino acid permease ACRAD_RS11480 PF00691 OmpA family ACRAD_RS11480 PF13505 Outer membrane protein beta-barrel domain ACRAD_RS11485 PF07963 Prokaryotic N-terminal methylation motif ACRAD_RS11485 PF00114 Pilin (bacterial filament) ACRAD_RS11490 PF02803 Thiolase, C-terminal domain ACRAD_RS11490 PF00108 Thiolase, N-terminal domain ACRAD_RS11520 PF17969 L,D-transpeptidase C-terminal domain ACRAD_RS11520 PF03734 L,D-transpeptidase catalytic domain ACRAD_RS11525 PF04304 Protein of unknown function (DUF454) ACRAD_RS11535 PF08085 Entericidin EcnA/B family ACRAD_RS11540 PF07687 Peptidase dimerisation domain ACRAD_RS11540 PF01546 Peptidase family M20/M25/M40 ACRAD_RS11550 PF01627 Hpt domain ACRAD_RS11550 PF00072 Response regulator receiver domain ACRAD_RS11550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACRAD_RS11550 PF01584 CheW-like domain ACRAD_RS11555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACRAD_RS11555 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term ACRAD_RS11560 PF01584 CheW-like domain ACRAD_RS11565 PF00072 Response regulator receiver domain ACRAD_RS11570 PF00072 Response regulator receiver domain ACRAD_RS11585 PF00873 AcrB/AcrD/AcrF family ACRAD_RS11590 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ACRAD_RS11590 PF03129 Anticodon binding domain ACRAD_RS11590 PF04073 Aminoacyl-tRNA editing domain ACRAD_RS11615 PF00692 dUTPase ACRAD_RS11625 PF10609 NUBPL iron-transfer P-loop NTPase ACRAD_RS11630 PF09334 tRNA synthetases class I (M) ACRAD_RS11630 PF01588 Putative tRNA binding domain ACRAD_RS11655 PF13533 Biotin-lipoyl like ACRAD_RS11660 PF00291 Pyridoxal-phosphate dependent enzyme ACRAD_RS11675 PF05552 Conserved TM helix ACRAD_RS11690 PF00970 Oxidoreductase FAD-binding domain ACRAD_RS11690 PF00175 Oxidoreductase NAD-binding domain ACRAD_RS11695 PF03466 LysR substrate binding domain ACRAD_RS11695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACRAD_RS11705 PF00361 Proton-conducting membrane transporter ACRAD_RS11710 PF00361 Proton-conducting membrane transporter ACRAD_RS11715 PF00361 Proton-conducting membrane transporter ACRAD_RS11715 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ACRAD_RS11720 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ACRAD_RS11725 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ACRAD_RS11730 PF12838 4Fe-4S dicluster domain ACRAD_RS11735 PF00146 NADH dehydrogenase ACRAD_RS11740 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ACRAD_RS11740 PF00384 Molybdopterin oxidoreductase ACRAD_RS11740 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ACRAD_RS11745 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ACRAD_RS11745 PF10531 SLBB domain ACRAD_RS11745 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ACRAD_RS11755 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ACRAD_RS11755 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ACRAD_RS11760 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ACRAD_RS11765 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ACRAD_RS11770 PF17151 Periplasmic sensor domain ACRAD_RS11770 PF00990 Diguanylate cyclase, GGDEF domain ACRAD_RS11780 PF00672 HAMP domain ACRAD_RS11780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACRAD_RS11780 PF00512 His Kinase A (phospho-acceptor) domain ACRAD_RS11785 PF00072 Response regulator receiver domain ACRAD_RS11785 PF00486 Transcriptional regulatory protein, C terminal ACRAD_RS11790 PF03477 ATP cone domain ACRAD_RS11790 PF02867 Ribonucleotide reductase, barrel domain ACRAD_RS11790 PF00317 Ribonucleotide reductase, all-alpha domain ACRAD_RS11800 PF00268 Ribonucleotide reductase, small chain ACRAD_RS11805 PF03466 LysR substrate binding domain ACRAD_RS11805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACRAD_RS11810 PF00593 TonB dependent receptor ACRAD_RS11810 PF07715 TonB-dependent Receptor Plug Domain ACRAD_RS11815 PF08378 Nuclease-related domain ACRAD_RS11825 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ACRAD_RS11825 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ACRAD_RS11830 PF00893 Small Multidrug Resistance protein ACRAD_RS11835 PF00834 Ribulose-phosphate 3 epimerase family ACRAD_RS11845 PF00756 Putative esterase ACRAD_RS11855 PF04445 Putative SAM-dependent methyltransferase ACRAD_RS11860 PF02673 Bacitracin resistance protein BacA ACRAD_RS11865 PF00814 Glycoprotease family ACRAD_RS11870 PF00132 Bacterial transferase hexapeptide (six repeats) ACRAD_RS11875 PF00293 NUDIX domain ACRAD_RS11915 PF00425 chorismate binding enzyme ACRAD_RS11915 PF04715 Anthranilate synthase component I, N terminal region ACRAD_RS11920 PF00155 Aminotransferase class I and II ACRAD_RS11925 PF00815 Histidinol dehydrogenase ACRAD_RS11930 PF01634 ATP phosphoribosyltransferase ACRAD_RS11935 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ACRAD_RS11940 PF01722 BolA-like protein ACRAD_RS11945 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ACRAD_RS11950 PF00309 Sigma-54 factor, Activator interacting domain (AID) ACRAD_RS11950 PF04963 Sigma-54 factor, core binding domain ACRAD_RS11950 PF04552 Sigma-54, DNA binding domain ACRAD_RS12000 PF02445 Quinolinate synthetase A protein ACRAD_RS12005 PF01960 ArgJ family ACRAD_RS12015 PF01043 SecA preprotein cross-linking domain ACRAD_RS12015 PF07517 SecA DEAD-like domain ACRAD_RS12015 PF02810 SEC-C motif ACRAD_RS12015 PF07516 SecA Wing and Scaffold domain ACRAD_RS12020 PF00578 AhpC/TSA family ACRAD_RS12020 PF10417 C-terminal domain of 1-Cys peroxiredoxin ACRAD_RS12035 PF02875 Mur ligase family, glutamate ligase domain ACRAD_RS12035 PF08245 Mur ligase middle domain ACRAD_RS12040 PF01039 Carboxyl transferase domain ACRAD_RS12045 PF00290 Tryptophan synthase alpha chain ACRAD_RS12055 PF12833 Helix-turn-helix domain ACRAD_RS12055 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ACRAD_RS12075 PF00291 Pyridoxal-phosphate dependent enzyme ACRAD_RS12080 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ACRAD_RS12085 PF00593 TonB dependent receptor ACRAD_RS12085 PF07715 TonB-dependent Receptor Plug Domain ACRAD_RS12090 PF01923 Cobalamin adenosyltransferase ACRAD_RS12110 PF02696 Uncharacterized ACR, YdiU/UPF0061 family ACRAD_RS12115 PF00486 Transcriptional regulatory protein, C terminal ACRAD_RS12115 PF00072 Response regulator receiver domain ACRAD_RS12120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACRAD_RS12120 PF00672 HAMP domain ACRAD_RS12120 PF00512 His Kinase A (phospho-acceptor) domain ACRAD_RS12130 PF12806 Acetyl-CoA dehydrogenase C-terminal like ACRAD_RS12130 PF02770 Acyl-CoA dehydrogenase, middle domain ACRAD_RS12130 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACRAD_RS12130 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACRAD_RS12135 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACRAD_RS12135 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACRAD_RS12135 PF12806 Acetyl-CoA dehydrogenase C-terminal like ACRAD_RS12135 PF02770 Acyl-CoA dehydrogenase, middle domain ACRAD_RS12140 PF00929 Exonuclease ACRAD_RS12145 PF03193 RsgA GTPase ACRAD_RS12155 PF00462 Glutaredoxin ACRAD_RS12160 PF02556 Preprotein translocase subunit SecB ACRAD_RS12165 PF02441 Flavoprotein ACRAD_RS12165 PF04127 DNA / pantothenate metabolism flavoprotein ACRAD_RS12170 PF04002 RadC-like JAB domain ACRAD_RS12175 PF01062 Bestrophin, RFP-TM, chloride channel ACRAD_RS12185 PF04279 Intracellular septation protein A ACRAD_RS12190 PF03795 YCII-related domain ACRAD_RS12200 PF01266 FAD dependent oxidoreductase ACRAD_RS12200 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ACRAD_RS12210 PF04461 Protein of unknown function (DUF520) ACRAD_RS12220 PF03061 Thioesterase superfamily ACRAD_RS12225 PF00085 Thioredoxin ACRAD_RS12230 PF00753 Metallo-beta-lactamase superfamily ACRAD_RS12230 PF04273 Putative phosphatase (DUF442) ACRAD_RS12245 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ACRAD_RS12245 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACRAD_RS12250 PF07687 Peptidase dimerisation domain ACRAD_RS12250 PF01546 Peptidase family M20/M25/M40 ACRAD_RS12285 PF01066 CDP-alcohol phosphatidyltransferase ACRAD_RS12290 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ ACRAD_RS12310 PF00056 lactate/malate dehydrogenase, NAD binding domain ACRAD_RS12310 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ACRAD_RS12320 PF01551 Peptidase family M23 ACRAD_RS12320 PF10145 Phage-related minor tail protein ACRAD_RS12320 PF01464 Transglycosylase SLT domain ACRAD_RS12325 PF00919 Uncharacterized protein family UPF0004 ACRAD_RS12325 PF01938 TRAM domain ACRAD_RS12325 PF04055 Radical SAM superfamily ACRAD_RS12330 PF02562 PhoH-like protein ACRAD_RS12335 PF02130 Uncharacterized protein family UPF0054 ACRAD_RS12365 PF03358 NADPH-dependent FMN reductase ACRAD_RS12370 PF03631 Virulence factor BrkB ACRAD_RS12375 PF01557 Fumarylacetoacetate (FAA) hydrolase family ACRAD_RS12410 PF17876 Cold shock domain ACRAD_RS12410 PF08461 Ribonuclease R winged-helix domain ACRAD_RS12410 PF08206 Ribonuclease B OB domain ACRAD_RS12410 PF00773 RNB domain ACRAD_RS12410 PF00575 S1 RNA binding domain ACRAD_RS12415 PF01432 Peptidase family M3 ACRAD_RS12420 PF09526 Probable metal-binding protein (DUF2387) ACRAD_RS12450 PF03937 Flavinator of succinate dehydrogenase ACRAD_RS12455 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACRAD_RS12455 PF02770 Acyl-CoA dehydrogenase, middle domain ACRAD_RS12455 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACRAD_RS12460 PF00743 Flavin-binding monooxygenase-like ACRAD_RS12465 PF01196 Ribosomal protein L17 ACRAD_RS12470 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ACRAD_RS12470 PF01000 RNA polymerase Rpb3/RpoA insert domain ACRAD_RS12470 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ACRAD_RS12475 PF01479 S4 domain ACRAD_RS12475 PF00163 Ribosomal protein S4/S9 N-terminal domain ACRAD_RS12480 PF00411 Ribosomal protein S11 ACRAD_RS12485 PF00416 Ribosomal protein S13/S18 ACRAD_RS12490 PF00444 Ribosomal protein L36 ACRAD_RS12495 PF00344 SecY translocase ACRAD_RS12500 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ACRAD_RS12505 PF00327 Ribosomal protein L30p/L7e ACRAD_RS12510 PF00333 Ribosomal protein S5, N-terminal domain ACRAD_RS12510 PF03719 Ribosomal protein S5, C-terminal domain ACRAD_RS12515 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ACRAD_RS12520 PF00347 Ribosomal protein L6 ACRAD_RS12525 PF00410 Ribosomal protein S8 ACRAD_RS12530 PF00253 Ribosomal protein S14p/S29e ACRAD_RS12535 PF00673 ribosomal L5P family C-terminus ACRAD_RS12535 PF00281 Ribosomal protein L5 ACRAD_RS12540 PF00467 KOW motif ACRAD_RS12540 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ACRAD_RS12545 PF00238 Ribosomal protein L14p/L23e ACRAD_RS12550 PF00366 Ribosomal protein S17 ACRAD_RS12555 PF00831 Ribosomal L29 protein ACRAD_RS12560 PF00252 Ribosomal protein L16p/L10e ACRAD_RS12565 PF00189 Ribosomal protein S3, C-terminal domain ACRAD_RS12565 PF07650 KH domain ACRAD_RS12570 PF00237 Ribosomal protein L22p/L17e ACRAD_RS12575 PF00203 Ribosomal protein S19 ACRAD_RS12580 PF03947 Ribosomal Proteins L2, C-terminal domain ACRAD_RS12580 PF00181 Ribosomal Proteins L2, RNA binding domain ACRAD_RS12585 PF00276 Ribosomal protein L23 ACRAD_RS12590 PF00573 Ribosomal protein L4/L1 family ACRAD_RS12595 PF00297 Ribosomal protein L3 ACRAD_RS12600 PF00338 Ribosomal protein S10p/S20e ACRAD_RS12605 PF00117 Glutamine amidotransferase class-I ACRAD_RS12610 PF01053 Cys/Met metabolism PLP-dependent enzyme ACRAD_RS12615 PF00175 Oxidoreductase NAD-binding domain ACRAD_RS12615 PF00042 Globin ACRAD_RS12615 PF00970 Oxidoreductase FAD-binding domain ACRAD_RS12620 PF02082 Transcriptional regulator ACRAD_RS12625 PF01926 50S ribosome-binding GTPase ACRAD_RS12630 PF00375 Sodium:dicarboxylate symporter family ACRAD_RS12640 PF01553 Acyltransferase ACRAD_RS12650 PF17191 RecG wedge domain ACRAD_RS12650 PF00271 Helicase conserved C-terminal domain ACRAD_RS12650 PF00270 DEAD/DEAH box helicase ACRAD_RS12655 PF00156 Phosphoribosyl transferase domain ACRAD_RS12665 PF03641 Possible lysine decarboxylase ACRAD_RS12670 PF01544 CorA-like Mg2+ transporter protein ACRAD_RS12680 PF05494 MlaC protein ACRAD_RS12685 PF02470 MlaD protein ACRAD_RS12690 PF02405 Permease MlaE ACRAD_RS12695 PF00005 ABC transporter ACRAD_RS12700 PF12343 Cold shock protein DEAD box A ACRAD_RS12700 PF00271 Helicase conserved C-terminal domain ACRAD_RS12700 PF00270 DEAD/DEAH box helicase ACRAD_RS12700 PF03880 DbpA RNA binding domain ACRAD_RS12705 PF00459 Inositol monophosphatase family ACRAD_RS12710 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ACRAD_RS12710 PF02779 Transketolase, pyrimidine binding domain ACRAD_RS12710 PF02780 Transketolase, C-terminal domain ACRAD_RS12715 PF00925 GTP cyclohydrolase II ACRAD_RS12720 PF01218 Coproporphyrinogen III oxidase ACRAD_RS12730 PF08501 Shikimate dehydrogenase substrate binding domain ACRAD_RS12730 PF01488 Shikimate / quinate 5-dehydrogenase ACRAD_RS12730 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ACRAD_RS12740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACRAD_RS12740 PF02770 Acyl-CoA dehydrogenase, middle domain ACRAD_RS12740 PF12806 Acetyl-CoA dehydrogenase C-terminal like ACRAD_RS12740 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACRAD_RS12750 PF04024 PspC domain ACRAD_RS12765 PF02091 Glycyl-tRNA synthetase alpha subunit ACRAD_RS12770 PF02092 Glycyl-tRNA synthetase beta subunit ACRAD_RS12770 PF05746 DALR anticodon binding domain ACRAD_RS12790 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ACRAD_RS12790 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ACRAD_RS12805 PF08241 Methyltransferase domain ACRAD_RS12830 PF01594 AI-2E family transporter ACRAD_RS12835 PF00080 Copper/zinc superoxide dismutase (SODC) ACRAD_RS12840 PF07690 Major Facilitator Superfamily ACRAD_RS12850 PF02913 FAD linked oxidases, C-terminal domain ACRAD_RS12850 PF01565 FAD binding domain ACRAD_RS12855 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ACRAD_RS12855 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ACRAD_RS12860 PF00892 EamA-like transporter family ACRAD_RS12865 PF00892 EamA-like transporter family ACRAD_RS12875 PF01925 Sulfite exporter TauE/SafE ACRAD_RS12880 PF09157 Pseudouridine synthase II TruB, C-terminal ACRAD_RS12880 PF16198 tRNA pseudouridylate synthase B C-terminal domain ACRAD_RS12880 PF01509 TruB family pseudouridylate synthase (N terminal domain) ACRAD_RS12885 PF03280 Proteobacterial lipase chaperone protein ACRAD_RS12890 PF00561 alpha/beta hydrolase fold ACRAD_RS12895 PF00561 alpha/beta hydrolase fold ACRAD_RS12900 PF01245 Ribosomal protein L19 ACRAD_RS12905 PF01746 tRNA (Guanine-1)-methyltransferase ACRAD_RS12910 PF01782 RimM N-terminal domain ACRAD_RS12910 PF05239 PRC-barrel domain ACRAD_RS12915 PF00886 Ribosomal protein S16 ACRAD_RS12920 PF07963 Prokaryotic N-terminal methylation motif ACRAD_RS12920 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor ACRAD_RS12925 PF07963 Prokaryotic N-terminal methylation motif ACRAD_RS12925 PF00114 Pilin (bacterial filament) ACRAD_RS12950 PF00114 Pilin (bacterial filament) ACRAD_RS12950 PF07963 Prokaryotic N-terminal methylation motif ACRAD_RS12955 PF02401 LytB protein ACRAD_RS12960 PF00625 Guanylate kinase ACRAD_RS12965 PF01192 RNA polymerase Rpb6 ACRAD_RS12970 PF02824 TGS domain ACRAD_RS12970 PF04607 Region found in RelA / SpoT proteins ACRAD_RS12970 PF13291 ACT domain ACRAD_RS12975 PF01042 Endoribonuclease L-PSP ACRAD_RS12980 PF04324 BFD-like [2Fe-2S] binding domain ACRAD_RS12985 PF00210 Ferritin-like domain ACRAD_RS12990 PF00114 Pilin (bacterial filament) ACRAD_RS12990 PF07963 Prokaryotic N-terminal methylation motif ACRAD_RS13005 PF07963 Prokaryotic N-terminal methylation motif ACRAD_RS13005 PF00114 Pilin (bacterial filament) ACRAD_RS13085 PF04536 TPM domain ACRAD_RS13090 PF04011 LemA family ACRAD_RS13100 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ACRAD_RS13100 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACRAD_RS13105 PF01645 Conserved region in glutamate synthase ACRAD_RS13105 PF04898 Glutamate synthase central domain ACRAD_RS13105 PF00310 Glutamine amidotransferases class-II ACRAD_RS13105 PF01493 GXGXG motif ACRAD_RS13115 PF01761 3-dehydroquinate synthase ACRAD_RS13120 PF01202 Shikimate kinase ACRAD_RS13125 PF07660 Secretin and TonB N terminus short domain ACRAD_RS13125 PF11741 AMIN domain ACRAD_RS13125 PF00263 Bacterial type II and III secretion system protein ACRAD_RS13125 PF03958 Bacterial type II/III secretion system short domain ACRAD_RS13135 PF04350 Pilus assembly protein, PilO ACRAD_RS13140 PF05137 Fimbrial assembly protein (PilN) ACRAD_RS13145 PF11104 Type IV pilus assembly protein PilM; ACRAD_RS13150 PF00905 Penicillin binding protein transpeptidase domain ACRAD_RS13150 PF00912 Transglycosylase ACRAD_RS13150 PF17092 Penicillin-binding protein OB-like domain ACRAD_RS13155 PF13847 Methyltransferase domain ACRAD_RS13160 PF00953 Glycosyl transferase family 4 ACRAD_RS13165 PF01225 Mur ligase family, catalytic domain ACRAD_RS13165 PF02875 Mur ligase family, glutamate ligase domain ACRAD_RS13165 PF08245 Mur ligase middle domain ACRAD_RS13170 PF01225 Mur ligase family, catalytic domain ACRAD_RS13170 PF08245 Mur ligase middle domain ACRAD_RS13170 PF02875 Mur ligase family, glutamate ligase domain ACRAD_RS13175 PF00905 Penicillin binding protein transpeptidase domain ACRAD_RS13175 PF03717 Penicillin-binding Protein dimerisation domain ACRAD_RS13185 PF01795 MraW methylase family ACRAD_RS13200 PF00749 tRNA synthetases class I (E and Q), catalytic domain ACRAD_RS13220 PF01545 Cation efflux family ACRAD_RS13225 PF12848 ABC transporter ACRAD_RS13225 PF00005 ABC transporter ACRAD_RS13230 PF01053 Cys/Met metabolism PLP-dependent enzyme ACRAD_RS13235 PF00106 short chain dehydrogenase ACRAD_RS13250 PF00575 S1 RNA binding domain ACRAD_RS13250 PF17674 HHH domain ACRAD_RS13250 PF16921 Tex protein YqgF-like domain ACRAD_RS13250 PF09371 Tex-like protein N-terminal domain ACRAD_RS13255 PF00072 Response regulator receiver domain ACRAD_RS13255 PF00486 Transcriptional regulatory protein, C terminal ACRAD_RS13260 PF00512 His Kinase A (phospho-acceptor) domain ACRAD_RS13260 PF00672 HAMP domain ACRAD_RS13260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACRAD_RS13265 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain ACRAD_RS13265 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain ACRAD_RS13290 PF00475 Imidazoleglycerol-phosphate dehydratase ACRAD_RS13295 PF00117 Glutamine amidotransferase class-I ACRAD_RS13300 PF00114 Pilin (bacterial filament) ACRAD_RS13300 PF07963 Prokaryotic N-terminal methylation motif ACRAD_RS13310 PF00977 Histidine biosynthesis protein ACRAD_RS13315 PF00892 EamA-like transporter family ACRAD_RS13330 PF01636 Phosphotransferase enzyme family ACRAD_RS13335 PF00977 Histidine biosynthesis protein ACRAD_RS13345 PF12833 Helix-turn-helix domain ACRAD_RS13345 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ACRAD_RS13365 PF02705 K+ potassium transporter ACRAD_RS13375 PF17763 Glutaminase/Asparaginase C-terminal domain ACRAD_RS13375 PF00710 Asparaginase, N-terminal ACRAD_RS13390 PF01593 Flavin containing amine oxidoreductase ACRAD_RS13400 PF02464 Competence-damaged protein ACRAD_RS13400 PF18146 Damage-inducible protein CinA KH domain ACRAD_RS13400 PF00994 Probable molybdopterin binding domain ACRAD_RS13405 PF06628 Catalase-related immune-responsive ACRAD_RS13405 PF00199 Catalase ACRAD_RS13405 PF18011 C-terminal domain found in long catalases ACRAD_RS13415 PF13737 Transposase DDE domain ACRAD_RS13430 PF00436 Single-strand binding protein family ACRAD_RS13435 PF07690 Major Facilitator Superfamily ACRAD_RS13450 PF08543 Phosphomethylpyrimidine kinase ACRAD_RS13450 PF02581 Thiamine monophosphate synthase ACRAD_RS13450 PF03070 TENA/THI-4/PQQC family ACRAD_RS13455 PF17755 UvrA DNA-binding domain ACRAD_RS13455 PF17760 UvrA interaction domain ACRAD_RS13460 PF00990 Diguanylate cyclase, GGDEF domain ACRAD_RS13470 PF02028 BCCT, betaine/carnitine/choline family transporter ACRAD_RS13485 PF00474 Sodium:solute symporter family ACRAD_RS13490 PF04341 Protein of unknown function, DUF485 ACRAD_RS13495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACRAD_RS13495 PF00512 His Kinase A (phospho-acceptor) domain ACRAD_RS13495 PF00672 HAMP domain ACRAD_RS13495 PF01627 Hpt domain ACRAD_RS13495 PF00072 Response regulator receiver domain ACRAD_RS13505 PF00072 Response regulator receiver domain ACRAD_RS13505 PF00196 Bacterial regulatory proteins, luxR family ACRAD_RS13510 PF03358 NADPH-dependent FMN reductase ACRAD_RS13515 PF00296 Luciferase-like monooxygenase ACRAD_RS13520 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ACRAD_RS13520 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACRAD_RS13525 PF16177 Acetyl-coenzyme A synthetase N-terminus ACRAD_RS13525 PF13193 AMP-binding enzyme C-terminal domain ACRAD_RS13525 PF00501 AMP-binding enzyme ACRAD_RS13530 PF05656 Protein of unknown function (DUF805) ACRAD_RS13535 PF00924 Mechanosensitive ion channel ACRAD_RS13535 PF05552 Conserved TM helix ACRAD_RS13545 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ACRAD_RS13550 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ACRAD_RS13560 PF13673 Acetyltransferase (GNAT) domain ACRAD_RS13565 PF09335 SNARE associated Golgi protein ACRAD_RS13580 PF02272 DHHA1 domain ACRAD_RS13580 PF01368 DHH family ACRAD_RS13580 PF17768 RecJ OB domain ACRAD_RS13585 PF01243 Pyridoxamine 5'-phosphate oxidase ACRAD_RS13585 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ACRAD_RS13590 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ACRAD_RS13590 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ACRAD_RS13590 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ACRAD_RS13590 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ACRAD_RS13595 PF00478 IMP dehydrogenase / GMP reductase domain ACRAD_RS13595 PF00571 CBS domain ACRAD_RS13600 PF03692 Putative zinc- or iron-chelating domain ACRAD_RS13605 PF00258 Flavodoxin ACRAD_RS13605 PF01613 Flavin reductase like domain ACRAD_RS13610 PF01169 Uncharacterized protein family UPF0016 ACRAD_RS13615 PF02817 e3 binding domain ACRAD_RS13615 PF00364 Biotin-requiring enzyme ACRAD_RS13615 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ACRAD_RS13620 PF00456 Transketolase, thiamine diphosphate binding domain ACRAD_RS13620 PF17831 Pyruvate dehydrogenase E1 component middle domain ACRAD_RS13635 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ACRAD_RS13640 PF12327 FtsZ family, C-terminal domain ACRAD_RS13640 PF00091 Tubulin/FtsZ family, GTPase domain ACRAD_RS13645 PF02491 SHS2 domain inserted in FTSA ACRAD_RS13650 PF08478 POTRA domain, FtsQ-type ACRAD_RS13650 PF03799 Cell division protein FtsQ ACRAD_RS13655 PF01820 D-ala D-ala ligase N-terminus ACRAD_RS13655 PF07478 D-ala D-ala ligase C-terminus ACRAD_RS13660 PF08245 Mur ligase middle domain ACRAD_RS13660 PF02875 Mur ligase family, glutamate ligase domain ACRAD_RS13660 PF01225 Mur ligase family, catalytic domain ACRAD_RS13665 PF04101 Glycosyltransferase family 28 C-terminal domain ACRAD_RS13665 PF03033 Glycosyltransferase family 28 N-terminal domain ACRAD_RS13670 PF07690 Major Facilitator Superfamily ACRAD_RS13675 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ACRAD_RS13675 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ACRAD_RS13680 PF00156 Phosphoribosyl transferase domain ACRAD_RS13685 PF03372 Endonuclease/Exonuclease/phosphatase family ACRAD_RS13700 PF07859 alpha/beta hydrolase fold ACRAD_RS13710 PF07722 Peptidase C26 ACRAD_RS13710 PF12796 Ankyrin repeats (3 copies) ACRAD_RS13725 PF00986 DNA gyrase B subunit, carboxyl terminus ACRAD_RS13725 PF00204 DNA gyrase B ACRAD_RS13725 PF01751 Toprim domain ACRAD_RS13725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACRAD_RS13730 PF05728 Uncharacterised protein family (UPF0227) ACRAD_RS13740 PF02600 Disulfide bond formation protein DsbB ACRAD_RS13745 PF04262 Glutamate-cysteine ligase ACRAD_RS13765 PF00155 Aminotransferase class I and II ACRAD_RS13770 PF01554 MatE ACRAD_RS13775 PF00106 short chain dehydrogenase ACRAD_RS13785 PF00486 Transcriptional regulatory protein, C terminal ACRAD_RS13785 PF00072 Response regulator receiver domain ACRAD_RS13790 PF00989 PAS fold ACRAD_RS13790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACRAD_RS13790 PF00512 His Kinase A (phospho-acceptor) domain ACRAD_RS13790 PF11808 Phosphate regulon sensor protein PhoR ACRAD_RS13795 PF02666 Phosphatidylserine decarboxylase ACRAD_RS13800 PF00581 Rhodanese-like domain ACRAD_RS13805 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ACRAD_RS13805 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ACRAD_RS13815 PF06628 Catalase-related immune-responsive ACRAD_RS13815 PF00199 Catalase ACRAD_RS13820 PF02580 D-Tyr-tRNA(Tyr) deacylase ACRAD_RS13845 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ACRAD_RS13845 PF00925 GTP cyclohydrolase II ACRAD_RS13850 PF00885 6,7-dimethyl-8-ribityllumazine synthase ACRAD_RS13855 PF01029 NusB family ACRAD_RS13860 PF02769 AIR synthase related protein, C-terminal domain ACRAD_RS13860 PF00586 AIR synthase related protein, N-terminal domain ACRAD_RS13865 PF04608 Phosphatidylglycerophosphatase A ACRAD_RS13870 PF14602 Hexapeptide repeat of succinyl-transferase ACRAD_RS13870 PF00132 Bacterial transferase hexapeptide (six repeats) ACRAD_RS13870 PF12804 MobA-like NTP transferase domain ACRAD_RS13875 PF01380 SIS domain ACRAD_RS13880 PF00892 EamA-like transporter family ACRAD_RS13885 PF00392 Bacterial regulatory proteins, gntR family ACRAD_RS13885 PF00155 Aminotransferase class I and II ACRAD_RS13890 PF01758 Sodium Bile acid symporter family ACRAD_RS13900 PF07690 Major Facilitator Superfamily ACRAD_RS13905 PF00701 Dihydrodipicolinate synthetase family ACRAD_RS13915 PF01259 SAICAR synthetase ACRAD_RS13925 PF04070 Domain of unknown function (DUF378) ACRAD_RS13930 PF00004 ATPase family associated with various cellular activities (AAA) ACRAD_RS13930 PF16193 AAA C-terminal domain ACRAD_RS13930 PF12002 MgsA AAA+ ATPase C terminal ACRAD_RS13935 PF07995 Glucose / Sorbosone dehydrogenase ACRAD_RS13940 PF13411 MerR HTH family regulatory protein ACRAD_RS13950 PF03692 Putative zinc- or iron-chelating domain ACRAD_RS13955 PF07043 Protein of unknown function (DUF1328) ACRAD_RS13965 PF01230 HIT domain ACRAD_RS13970 PF00730 HhH-GPD superfamily base excision DNA repair protein ACRAD_RS13970 PF14815 NUDIX domain ACRAD_RS13970 PF10576 Iron-sulfur binding domain of endonuclease III ACRAD_RS13970 PF00633 Helix-hairpin-helix motif ACRAD_RS13985 PF03352 Methyladenine glycosylase ACRAD_RS13990 PF08240 Alcohol dehydrogenase GroES-like domain ACRAD_RS13990 PF00107 Zinc-binding dehydrogenase ACRAD_RS14005 PF03466 LysR substrate binding domain ACRAD_RS14005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACRAD_RS14010 PF00248 Aldo/keto reductase family ACRAD_RS14015 PF07690 Major Facilitator Superfamily ACRAD_RS14025 PF05173 Dihydrodipicolinate reductase, C-terminus ACRAD_RS14025 PF01113 Dihydrodipicolinate reductase, N-terminus ACRAD_RS14035 PF00684 DnaJ central domain ACRAD_RS14035 PF01556 DnaJ C terminal domain ACRAD_RS14035 PF00226 DnaJ domain ACRAD_RS14045 PF00873 AcrB/AcrD/AcrF family ACRAD_RS14055 PF00440 Bacterial regulatory proteins, tetR family ACRAD_RS14060 PF00311 Phosphoenolpyruvate carboxylase ACRAD_RS14065 PF00860 Permease family ACRAD_RS14070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACRAD_RS14070 PF03466 LysR substrate binding domain ACRAD_RS14080 PF13419 Haloacid dehalogenase-like hydrolase ACRAD_RS14090 PF00920 Dehydratase family ACRAD_RS14095 PF02911 Formyl transferase, C-terminal domain ACRAD_RS14095 PF00551 Formyl transferase ACRAD_RS14100 PF01189 16S rRNA methyltransferase RsmB/F ACRAD_RS14100 PF01029 NusB family ACRAD_RS14105 PF02535 ZIP Zinc transporter ACRAD_RS14115 PF00209 Sodium:neurotransmitter symporter family ACRAD_RS14125 PF15887 Putative zinc-binding metallo-peptidase ACRAD_RS14125 PF10005 zinc-ribbon domain ACRAD_RS14160 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ACRAD_RS14170 PF07859 alpha/beta hydrolase fold ACRAD_RS14185 PF01025 GrpE ACRAD_RS14190 PF00012 Hsp70 protein ACRAD_RS14200 PF13406 Transglycosylase SLT domain ACRAD_RS14205 PF02222 ATP-grasp domain ACRAD_RS14205 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ACRAD_RS14210 PF00731 AIR carboxylase ACRAD_RS14220 PF08245 Mur ligase middle domain ACRAD_RS14220 PF02875 Mur ligase family, glutamate ligase domain ACRAD_RS14220 PF01225 Mur ligase family, catalytic domain ACRAD_RS14225 PF13193 AMP-binding enzyme C-terminal domain ACRAD_RS14225 PF00501 AMP-binding enzyme ACRAD_RS14230 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACRAD_RS14230 PF12806 Acetyl-CoA dehydrogenase C-terminal like ACRAD_RS14230 PF02770 Acyl-CoA dehydrogenase, middle domain ACRAD_RS14230 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACRAD_RS14240 PF07690 Major Facilitator Superfamily ACRAD_RS14245 PF00378 Enoyl-CoA hydratase/isomerase ACRAD_RS14250 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain ACRAD_RS14250 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ACRAD_RS14250 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ACRAD_RS14260 PF03741 Integral membrane protein TerC family ACRAD_RS14265 PF01979 Amidohydrolase family ACRAD_RS14270 PF00156 Phosphoribosyl transferase domain ACRAD_RS14280 PF10411 Disulfide bond isomerase protein N-terminus ACRAD_RS14280 PF13098 Thioredoxin-like domain ACRAD_RS14285 PF01545 Cation efflux family ACRAD_RS14290 PF02583 Metal-sensitive transcriptional repressor ACRAD_RS14300 PF01926 50S ribosome-binding GTPase ACRAD_RS14300 PF10396 GTP-binding protein TrmE N-terminus ACRAD_RS14300 PF12631 MnmE helical domain ACRAD_RS14305 PF14849 YidC periplasmic domain ACRAD_RS14305 PF02096 60Kd inner membrane protein ACRAD_RS14310 PF01809 Putative membrane protein insertion efficiency factor ACRAD_RS14315 PF00825 Ribonuclease P ACRAD_RS14320 PF00468 Ribosomal protein L34 ACRAD_RS14415 PF00816 H-NS histone family ACRAD_RS14420 PF00929 Exonuclease ACRAD_RS14420 PF13307 Helicase C-terminal domain ACRAD_RS14420 PF04851 Type III restriction enzyme, res subunit ACRAD_RS14455 PF00154 recA bacterial DNA recombination protein ACRAD_RS14495 PF00085 Thioredoxin ACRAD_RS14495 PF02683 Cytochrome C biogenesis protein transmembrane region ACRAD_RS14495 PF11412 Disulphide bond corrector protein DsbC ACRAD_RS14640 PF05970 PIF1-like helicase ACRAD_RS14640 PF14493 Helix-turn-helix domain ACRAD_RS14650 PF13737 Transposase DDE domain ACRAD_RS14855 PF00436 Single-strand binding protein family ACRAD_RS14945 PF00665 Integrase core domain ACRAD_RS14945 PF13936 Helix-turn-helix domain ACRAD_RS14955 PF02195 ParB-like nuclease domain ACRAD_RS14955 PF17762 HTH domain found in ParB protein ACRAD_RS15180 PF01464 Transglycosylase SLT domain ACRAD_RS15190 PF00437 Type II/IV secretion system protein ACRAD_RS15200 PF00691 OmpA family ACRAD_RS15255 PF06122 Conjugative relaxosome accessory transposon protein ACRAD_RS15260 PF00580 UvrD/REP helicase N-terminal domain ACRAD_RS15260 PF13361 UvrD-like helicase C-terminal domain ACRAD_RS15340 PF01343 Peptidase family S49 ACRAD_RS15355 PF12161 HsdM N-terminal domain ACRAD_RS15355 PF02384 N-6 DNA Methylase ACRAD_RS15415 PF14659 Phage integrase, N-terminal SAM-like domain ACRAD_RS15415 PF00589 Phage integrase family ACRAD_RS15415 PF13356 Arm DNA-binding domain ACRAD_RS15455 PF11799 impB/mucB/samB family C-terminal domain ACRAD_RS15455 PF00817 impB/mucB/samB family ACRAD_RS15455 PF13438 Domain of unknown function (DUF4113) ACRAD_RS15460 PF00717 Peptidase S24-like ACRAD_RS15470 PF02899 Phage integrase, N-terminal SAM-like domain ACRAD_RS15470 PF00589 Phage integrase family ACRAD_RS15505 PF07916 TraG-like protein, N-terminal region ACRAD_RS15515 PF01751 Toprim domain ACRAD_RS15515 PF01131 DNA topoisomerase ACRAD_RS15595 PF00394 Multicopper oxidase ACRAD_RS15595 PF07731 Multicopper oxidase ACRAD_RS15595 PF07732 Multicopper oxidase ACRAD_RS15605 PF13936 Helix-turn-helix domain ACRAD_RS15605 PF00665 Integrase core domain ACRAD_RS15625 PF03358 NADPH-dependent FMN reductase ACRAD_RS15630 PF13610 DDE domain ACRAD_RS15640 PF13610 DDE domain ACRAD_RS15655 PF07664 Ferrous iron transport protein B C terminus ACRAD_RS15655 PF02421 Ferrous iron transport protein B ACRAD_RS15655 PF07670 Nucleoside recognition ACRAD_RS15665 PF01545 Cation efflux family ACRAD_RS15670 PF13411 MerR HTH family regulatory protein ACRAD_RS15680 PF02321 Outer membrane efflux protein ACRAD_RS15685 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ACRAD_RS15690 PF00873 AcrB/AcrD/AcrF family ACRAD_RS15695 PF01545 Cation efflux family ACRAD_RS15700 PF13610 DDE domain ACRAD_RS15715 PF13737 Transposase DDE domain ACRAD_RS15730 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ACRAD_RS15760 PF13737 Transposase DDE domain ACRAD_RS15770 PF13635 Domain of unknown function (DUF4143) ACRAD_RS15770 PF13173 AAA domain ACRAD_RS15830 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACRAD_RS15835 PF03358 NADPH-dependent FMN reductase ACRAD_RS15840 PF01758 Sodium Bile acid symporter family ACRAD_RS15850 PF01022 Bacterial regulatory protein, arsR family ACRAD_RS15855 PF03960 ArsC family ACRAD_RS15860 PF02796 Helix-turn-helix domain of resolvase ACRAD_RS15860 PF00239 Resolvase, N terminal domain ACRAD_RS15870 PF01047 MarR family ACRAD_RS15875 PF02566 OsmC-like protein ACRAD_RS15900 PF13737 Transposase DDE domain ACRAD_RS15920 PF13737 Transposase DDE domain ACRAD_RS15945 PF13194 Domain of unknown function (DUF4010) ACRAD_RS15950 PF00672 HAMP domain ACRAD_RS15950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACRAD_RS15950 PF00512 His Kinase A (phospho-acceptor) domain ACRAD_RS15955 PF00072 Response regulator receiver domain ACRAD_RS15955 PF00486 Transcriptional regulatory protein, C terminal ACRAD_RS15980 PF14759 Reductase C-terminal ACRAD_RS15980 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACRAD_RS15985 PF00067 Cytochrome P450 ACRAD_RS15990 PF00111 2Fe-2S iron-sulfur cluster binding domain ACRAD_RS15995 PF12833 Helix-turn-helix domain ACRAD_RS15995 PF02311 AraC-like ligand binding domain ACRAD_RS16000 PF00239 Resolvase, N terminal domain ACRAD_RS16000 PF02796 Helix-turn-helix domain of resolvase ACRAD_RS16015 PF01051 Initiator Replication protein ACRAD_RS16020 PF13614 AAA domain ACRAD_RS16035 PF00872 Transposase, Mutator family ACRAD_RS16060 PF00239 Resolvase, N terminal domain ACRAD_RS16060 PF02796 Helix-turn-helix domain of resolvase ACRAD_RS16090 PF00239 Resolvase, N terminal domain ACRAD_RS16090 PF02796 Helix-turn-helix domain of resolvase ACRAD_RS16105 PF05016 ParE toxin of type II toxin-antitoxin system, parDE ACRAD_RS16140 PF00440 Bacterial regulatory proteins, tetR family ACRAD_RS16140 PF17932 Tetracyclin repressor-like, C-terminal domain ACRAD_RS16150 PF13953 PapC C-terminal domain ACRAD_RS16150 PF13954 PapC N-terminal domain ACRAD_RS16150 PF00577 Outer membrane usher protein ACRAD_RS16155 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ACRAD_RS16155 PF02753 Pili assembly chaperone PapD, C-terminal domain ACRAD_RS16165 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system ACRAD_RS16200 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin ACRAD_RS16205 PF01850 PIN domain ACRAD_RS16235 PF07517 SecA DEAD-like domain ACRAD_RS16235 PF01043 SecA preprotein cross-linking domain ACRAD_RS16235 PF07516 SecA Wing and Scaffold domain ACRAD_RS16235 PF02810 SEC-C motif ACRAD_RS16245 PF00239 Resolvase, N terminal domain ACRAD_RS16245 PF02796 Helix-turn-helix domain of resolvase ACRAD_RS16255 PF01051 Initiator Replication protein ACRAD_RS16325 PF03389 MobA/MobL family ACRAD_RS16350 PF02796 Helix-turn-helix domain of resolvase ACRAD_RS16350 PF00239 Resolvase, N terminal domain