locus-tag	class	description
C3F34_RS00005	COG1414	Transcriptional regulator
C3F34_RS00010	COG0531	amino acid
C3F34_RS00015	COG1410	methionine synthase
C3F34_RS00015	COG0646	methionine synthase
C3F34_RS00055	COG0864	Transcriptional regulator
C3F34_RS00060	COG0439	Biotin carboxylase
C3F34_RS00075	COG3706	GGDEF domain
C3F34_RS00080	COG2814	Major facilitator Superfamily
C3F34_RS00090	COG0445	tRNA wobble uridine modification
C3F34_RS00120	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
C3F34_RS00125	COG0138	bifunctional purine biosynthesis protein purh
C3F34_RS00130	COG0151	Belongs to the GarS family
C3F34_RS00140	COG1250	3-hydroxyacyl-CoA dehydrogenase
C3F34_RS00145	COG1464	Belongs to the NlpA lipoprotein family
C3F34_RS00150	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
C3F34_RS00155	COG2011	ABC-type metal ion transport system permease component
C3F34_RS00175	COG1045	serine acetyltransferase
C3F34_RS00190	COG1028	Short-chain dehydrogenase reductase Sdr
C3F34_RS00195	COG2909	trisaccharide binding
C3F34_RS00205	COG0318	PFAM AMP-dependent synthetase and ligase
C3F34_RS00210	COG0300	oxidoreductase activity
C3F34_RS00215	COG0300	oxidoreductase activity
C3F34_RS00225	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
C3F34_RS00230	COG1309	transcriptional regulator
C3F34_RS00235	COG1012	belongs to the aldehyde dehydrogenase family
C3F34_RS00250	COG0579	oxidoreductase
C3F34_RS00295	COG1012	belongs to the aldehyde dehydrogenase family
C3F34_RS00300	COG0531	amino acid
C3F34_RS00305	COG0531	amino acid
C3F34_RS00310	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
C3F34_RS00350	COG0204	Acyl-transferase
C3F34_RS00385	COG1464	Belongs to the NlpA lipoprotein family
C3F34_RS00390	COG1464	Belongs to the NlpA lipoprotein family
C3F34_RS00395	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
C3F34_RS00400	COG2011	ABC-type metal ion transport system permease component
C3F34_RS00405	COG0012	GTP binding
C3F34_RS00410	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
C3F34_RS00430	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
C3F34_RS00440	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
C3F34_RS00465	COG1917	Cupin 2, conserved barrel domain protein
C3F34_RS00465	COG2207	Transcriptional regulator
C3F34_RS00470	COG0386	Belongs to the glutathione peroxidase family
C3F34_RS00475	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
C3F34_RS00480	COG0436	Aminotransferase
C3F34_RS00520	COG0612	Peptidase, M16
C3F34_RS00525	COG0384	phenazine biosynthesis protein PhzF
C3F34_RS00530	COG1823	symporter activity
C3F34_RS00535	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
C3F34_RS00560	COG0753	catalase activity
C3F34_RS00610	COG0556	nucleotide-excision repair
C3F34_RS00625	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
C3F34_RS00640	COG2050	protein possibly involved in aromatic compounds catabolism
C3F34_RS00645	COG2351	hydroxyisourate hydrolase activity
C3F34_RS00655	COG1686	Belongs to the peptidase S11 family
C3F34_RS00670	COG0415	Belongs to the DNA photolyase family
C3F34_RS00695	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
C3F34_RS00705	COG0693	protein deglycase activity
C3F34_RS00710	COG1960	acyl-CoA dehydrogenase activity
C3F34_RS00715	COG1301	dicarboxylic acid transport
C3F34_RS00725	COG3139	Protein of unknown function (DUF1315)
C3F34_RS00730	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
C3F34_RS00735	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
C3F34_RS00755	COG0642	Histidine kinase
C3F34_RS00780	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
C3F34_RS00790	COG2199	diguanylate cyclase activity
C3F34_RS00790	COG2203	Gaf domain
C3F34_RS00795	COG1720	tRNA m6t6A37 methyltransferase activity
C3F34_RS00830	COG0789	Transcriptional regulator
C3F34_RS00835	COG0826	peptidase U32
C3F34_RS00840	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
C3F34_RS00845	COG3634	alkyl hydroperoxide reductase activity
C3F34_RS00875	COG1643	Atp-dependent helicase
C3F34_RS00925	COG0564	pseudouridine synthase activity
C3F34_RS00940	COG0352	thiamine-phosphate diphosphorylase activity
C3F34_RS00945	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
C3F34_RS00975	COG0402	S-adenosylhomocysteine deaminase activity
C3F34_RS00990	COG2985	domain, Protein
C3F34_RS01010	COG2814	Major facilitator Superfamily
C3F34_RS01015	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
C3F34_RS01055	COG1136	(ABC) transporter
C3F34_RS01065	COG3038	cytochrome b561
C3F34_RS01070	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
C3F34_RS01090	COG2816	NAD+ diphosphatase activity
C3F34_RS01110	COG1131	(ABC) transporter
C3F34_RS01115	COG0842	Transport permease protein
C3F34_RS01130	COG0772	Belongs to the SEDS family
C3F34_RS01135	COG2951	lytic endotransglycosylase activity
C3F34_RS01145	COG1574	metal-dependent hydrolase with the TIM-barrel fold
C3F34_RS01190	COG0052	Belongs to the universal ribosomal protein uS2 family
C3F34_RS01205	COG2223	nitrite transmembrane transporter activity
C3F34_RS01215	COG2175	clavaminate synthase activity
C3F34_RS01220	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
C3F34_RS01225	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
C3F34_RS01245	COG1028	Short-chain dehydrogenase reductase Sdr
C3F34_RS01250	COG2610	gluconate transmembrane transporter activity
C3F34_RS01255	COG0583	DNA-binding transcription factor activity
C3F34_RS01265	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
C3F34_RS01285	COG0047	phosphoribosylformylglycinamidine synthase activity
C3F34_RS01285	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
C3F34_RS01300	COG2255	four-way junction helicase activity
C3F34_RS01455	COG4695	Portal protein
C3F34_RS01460	COG1802	Transcriptional regulator
C3F34_RS01460	COG4626	Terminase
C3F34_RS01645	COG0824	Thioesterase
C3F34_RS01665	COG0823	Involved in the tonB-independent uptake of proteins
C3F34_RS01685	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
C3F34_RS01725	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
C3F34_RS01730	COG0628	permease
C3F34_RS01740	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
C3F34_RS01760	COG0658	competence protein
C3F34_RS01760	COG2333	competence protein COMEC
C3F34_RS01765	COG1136	(ABC) transporter
C3F34_RS01770	COG4591	ABC-type transport system involved in lipoprotein release permease component
C3F34_RS01785	COG1671	Belongs to the UPF0178 family
C3F34_RS01805	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
C3F34_RS01825	COG1301	dicarboxylic acid transport
C3F34_RS01850	COG1280	lysine exporter protein (LysE YggA)
C3F34_RS01855	COG1522	sequence-specific DNA binding
C3F34_RS01870	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
C3F34_RS01885	COG0019	diaminopimelate decarboxylase activity
C3F34_RS01895	COG1113	amino acid transport
C3F34_RS01900	COG1115	amino acid carrier protein
C3F34_RS01925	COG0175	sulfate reduction
C3F34_RS01940	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
C3F34_RS01955	COG0174	glutamine synthetase
C3F34_RS01990	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
C3F34_RS02005	COG1802	Transcriptional regulator
C3F34_RS02010	COG2217	Heavy metal translocating P-type atpase
C3F34_RS02020	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
C3F34_RS02035	COG2234	aminopeptidase activity
C3F34_RS02045	COG3384	dioxygenase
C3F34_RS02055	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
C3F34_RS02060	COG2878	Part of a membrane complex involved in electron transport
C3F34_RS02105	COG0742	ribosomal rna small subunit methyltransferase
C3F34_RS02135	COG0583	DNA-binding transcription factor activity
C3F34_RS02140	COG2814	Major facilitator Superfamily
C3F34_RS02150	COG1607	acyl-coa hydrolase
C3F34_RS02155	COG1752	Esterase of the alpha-beta hydrolase superfamily
C3F34_RS02160	COG1115	amino acid carrier protein
C3F34_RS02165	COG0786	glutamate:sodium symporter activity
C3F34_RS02180	COG2321	neutral zinc metallopeptidase
C3F34_RS02185	COG2354	Protein conserved in bacteria
C3F34_RS02195	COG1585	Membrane protein implicated in regulation of membrane protease activity
C3F34_RS02200	COG2268	Band 7 protein
C3F34_RS02220	COG3733	amine oxidase
C3F34_RS02230	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
C3F34_RS02240	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
C3F34_RS02255	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
C3F34_RS02260	COG1053	succinate dehydrogenase
C3F34_RS02265	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
C3F34_RS02270	COG2009	succinate dehydrogenase
C3F34_RS02280	COG2072	flavoprotein involved in K transport
C3F34_RS02285	COG0300	oxidoreductase activity
C3F34_RS02300	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
C3F34_RS02300	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
C3F34_RS02320	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
C3F34_RS02345	COG0564	pseudouridine synthase activity
C3F34_RS02370	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
C3F34_RS02400	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
C3F34_RS02420	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
C3F34_RS02450	COG0586	Pfam SNARE associated Golgi protein
C3F34_RS02460	COG0583	DNA-binding transcription factor activity
C3F34_RS02480	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
C3F34_RS02485	COG2921	Belongs to the UPF0250 family
C3F34_RS02490	COG0321	lipoyl(octanoyl) transferase activity
C3F34_RS02505	COG0531	amino acid
C3F34_RS02515	COG1028	Short-chain dehydrogenase reductase Sdr
C3F34_RS02525	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
C3F34_RS02530	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
C3F34_RS02530	COG1648	precorrin-2 dehydrogenase activity
C3F34_RS02535	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
C3F34_RS02545	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
C3F34_RS02555	COG0211	Belongs to the bacterial ribosomal protein bL27 family
C3F34_RS02575	COG0671	phosphoesterase, PA-phosphatase related
C3F34_RS02580	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
C3F34_RS02590	COG1538	Outer membrane efflux protein
C3F34_RS02595	COG0393	Putative heavy-metal-binding
C3F34_RS02610	COG1028	Short-chain dehydrogenase reductase Sdr
C3F34_RS02620	COG0525	valine-tRNA ligase activity
C3F34_RS02665	COG0765	amino acid transport
C3F34_RS02670	COG0765	amino acid transport
C3F34_RS02675	COG1126	abc transporter atp-binding protein
C3F34_RS02680	COG0004	ammonium transporteR
C3F34_RS02685	COG1011	Hydrolase
C3F34_RS02695	COG0642	Histidine kinase
C3F34_RS02700	COG0745	RESPONSE REGULATOR receiver
C3F34_RS02705	COG2194	sulfuric ester hydrolase activity
C3F34_RS02720	COG2814	Major facilitator Superfamily
C3F34_RS02730	COG1752	Esterase of the alpha-beta hydrolase superfamily
C3F34_RS02750	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
C3F34_RS02755	COG0142	geranyltranstransferase activity
C3F34_RS02760	COG2199	diguanylate cyclase activity
C3F34_RS02765	COG2828	Protein conserved in bacteria
C3F34_RS02770	COG1113	amino acid transport
C3F34_RS02790	COG0745	RESPONSE REGULATOR receiver
C3F34_RS02795	COG2205	protein histidine kinase activity
C3F34_RS02800	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
C3F34_RS02805	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
C3F34_RS02810	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
C3F34_RS02830	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
C3F34_RS02840	COG4716	Myosin-crossreactive antigen
C3F34_RS02865	COG2515	1-aminocyclopropane-1-carboxylate deaminase
C3F34_RS02870	COG2081	HI0933 family
C3F34_RS02875	COG0668	transmembrane transport
C3F34_RS02885	COG4303	Ethanolamine ammonia lyase large subunit
C3F34_RS02890	COG0531	amino acid
C3F34_RS02905	COG0583	DNA-binding transcription factor activity
C3F34_RS02910	COG1278	Cold shock
C3F34_RS02930	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
C3F34_RS02935	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
C3F34_RS02940	COG0713	ATP synthesis coupled electron transport
C3F34_RS02950	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
C3F34_RS02965	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
C3F34_RS02975	COG0649	NAD binding
C3F34_RS02975	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
C3F34_RS02995	COG2205	protein histidine kinase activity
C3F34_RS03000	COG0745	RESPONSE REGULATOR receiver
C3F34_RS03015	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
C3F34_RS03030	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
C3F34_RS03035	COG2274	protein secretion by the type I secretion system
C3F34_RS03050	COG1028	Short-chain dehydrogenase reductase Sdr
C3F34_RS03065	COG1399	metal-binding, possibly nucleic acid-binding protein
C3F34_RS03070	COG3101	peptidyl-lysine hydroxylation
C3F34_RS03075	COG0009	L-threonylcarbamoyladenylate synthase
C3F34_RS03080	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
C3F34_RS03085	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
C3F34_RS03100	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
C3F34_RS03110	COG0339	signal peptide processing
C3F34_RS03120	COG4166	transmembrane transport
C3F34_RS03160	COG2226	methyltransferase
C3F34_RS03170	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
C3F34_RS03170	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
C3F34_RS03175	COG0596	Alpha beta hydrolase
C3F34_RS03175	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
C3F34_RS03175	COG2226	methyltransferase
C3F34_RS03180	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
C3F34_RS03195	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
C3F34_RS03200	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
C3F34_RS03210	COG1196	nuclear chromosome segregation
C3F34_RS03220	COG0730	response to heat
C3F34_RS03240	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
C3F34_RS03265	COG0789	Transcriptional regulator
C3F34_RS03275	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
C3F34_RS03285	COG3422	double-strand break repair
C3F34_RS03295	COG2824	Alkylphosphonate utilization operon protein PhnA
C3F34_RS03305	COG3189	MarR family transcriptional regulator
C3F34_RS03325	COG0564	pseudouridine synthase activity
C3F34_RS03360	COG0354	folic acid binding
C3F34_RS03385	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
C3F34_RS03395	COG0424	maF-like protein
C3F34_RS03400	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
C3F34_RS03405	COG1792	Involved in formation and maintenance of cell shape
C3F34_RS03410	COG1077	Cell shape determining protein MreB Mrl
C3F34_RS03415	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
C3F34_RS03425	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
C3F34_RS03445	COG0583	DNA-binding transcription factor activity
C3F34_RS03480	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
C3F34_RS03495	COG0679	Auxin Efflux Carrier
C3F34_RS03500	COG1902	pentaerythritol trinitrate reductase activity
C3F34_RS03520	COG1970	mechanosensitive ion channel activity
C3F34_RS03525	COG1217	gtp-binding protein TYPA
C3F34_RS03530	COG2233	PERMEase
C3F34_RS03535	COG2813	Specifically methylates the guanine in position
C3F34_RS03540	COG0833	amino acid
C3F34_RS03570	COG0183	Belongs to the thiolase family
C3F34_RS03590	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
C3F34_RS03605	COG1804	L-carnitine dehydratase bile acid-inducible protein F
C3F34_RS03610	COG2207	Transcriptional regulator
C3F34_RS03625	COG0183	Belongs to the thiolase family
C3F34_RS03655	COG1272	protein, Hemolysin III
C3F34_RS03660	COG0477	Major facilitator Superfamily
C3F34_RS03665	COG1408	metallophosphoesterase
C3F34_RS03670	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
C3F34_RS03680	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
C3F34_RS03705	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
C3F34_RS03710	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
C3F34_RS03720	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
C3F34_RS03725	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
C3F34_RS03730	COG0625	glutathione transferase activity
C3F34_RS03735	COG2969	positive regulation of protein catabolic process
C3F34_RS03795	COG2199	diguanylate cyclase activity
C3F34_RS03825	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
C3F34_RS03830	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
C3F34_RS03845	COG0450	alkyl hydroperoxide reductase
C3F34_RS03865	COG0285	dihydrofolate synthase activity
C3F34_RS03870	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
C3F34_RS03915	COG4206	TonB-dependent receptor
C3F34_RS03920	COG2096	Adenosyltransferase
C3F34_RS03940	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
C3F34_RS03945	COG2315	Protein conserved in bacteria
C3F34_RS03950	COG1113	amino acid transport
C3F34_RS03955	COG0745	RESPONSE REGULATOR receiver
C3F34_RS03960	COG2205	protein histidine kinase activity
C3F34_RS03970	COG1960	acyl-CoA dehydrogenase activity
C3F34_RS03975	COG1960	acyl-CoA dehydrogenase activity
C3F34_RS03980	COG3223	Belongs to the PsiE family
C3F34_RS04010	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
C3F34_RS04045	COG1091	dTDP-4-dehydrorhamnose reductase activity
C3F34_RS04065	COG0726	polysaccharide deacetylase
C3F34_RS04080	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
C3F34_RS04085	COG5002	protein histidine kinase activity
C3F34_RS04100	COG0793	Belongs to the peptidase S41A family
C3F34_RS04130	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
C3F34_RS04135	COG0857	belongs to the CobB CobQ family
C3F34_RS04135	COG0280	phosphate acetyltransferase
C3F34_RS04145	COG2226	methyltransferase
C3F34_RS04150	COG0697	spore germination
C3F34_RS04160	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
C3F34_RS04160	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
C3F34_RS04180	COG0740	serine-type endopeptidase activity
C3F34_RS04190	COG4771	TonB-dependent receptor
C3F34_RS04195	COG4774	siderophore transport
C3F34_RS04205	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
C3F34_RS04215	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
C3F34_RS04215	COG2813	Specifically methylates the guanine in position
C3F34_RS04325	COG0788	formyltetrahydrofolate deformylase activity
C3F34_RS04350	COG4651	solute:proton antiporter activity
C3F34_RS04350	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
C3F34_RS04370	COG0724	RNA recognition motif
C3F34_RS04380	COG1929	Belongs to the glycerate kinase type-1 family
C3F34_RS04415	COG2900	Belongs to the SlyX family
C3F34_RS04420	COG0488	(ABC) transporter
C3F34_RS04435	COG1560	Kdo2-lipid A biosynthetic process
C3F34_RS04470	COG0252	asparaginase activity
C3F34_RS04495	COG0473	3-isopropylmalate dehydrogenase activity
C3F34_RS04555	COG1846	Transcriptional regulator
C3F34_RS04565	COG1960	acyl-CoA dehydrogenase activity
C3F34_RS04575	COG1280	lysine exporter protein (LysE YggA)
C3F34_RS04585	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
C3F34_RS04590	COG3011	Protein conserved in bacteria
C3F34_RS04605	COG0446	pyridine nucleotide-disulphide oxidoreductase
C3F34_RS04610	COG3384	dioxygenase
C3F34_RS04615	COG1028	Short-chain dehydrogenase reductase Sdr
C3F34_RS04630	COG4638	Rieske (2fe-2S)
C3F34_RS04635	COG0583	DNA-binding transcription factor activity
C3F34_RS04660	COG4569	acetaldehyde dehydrogenase (acetylating) activity
C3F34_RS04665	COG3971	2-oxopent-4-enoate hydratase activity
C3F34_RS04675	COG0625	glutathione transferase activity
C3F34_RS04680	COG2378	regulation of single-species biofilm formation
C3F34_RS04685	COG0546	phosphoglycolate phosphatase activity
C3F34_RS04700	COG1530	ribonuclease E activity
C3F34_RS04705	COG0318	PFAM AMP-dependent synthetase and ligase
C3F34_RS04730	COG1983	PspC domain protein
C3F34_RS04735	COG0517	IMP dehydrogenase activity
C3F34_RS04735	COG0617	tRNA 3'-terminal CCA addition
C3F34_RS04735	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
C3F34_RS04775	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
C3F34_RS04800	COG0493	'glutamate synthase
C3F34_RS04820	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
C3F34_RS04835	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
C3F34_RS04850	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
C3F34_RS04860	COG0644	oxidoreductase
C3F34_RS04860	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
C3F34_RS04875	COG4535	Mg2 and Co2 transporter CorC
C3F34_RS04880	COG0815	Transfers the fatty acyl group on membrane lipoproteins
C3F34_RS04900	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
C3F34_RS04910	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
C3F34_RS04920	COG0484	heat shock protein binding
C3F34_RS04925	COG0789	Transcriptional regulator
C3F34_RS04930	COG2841	Protein conserved in bacteria
C3F34_RS04935	COG0598	Magnesium transport protein CorA
C3F34_RS04945	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
C3F34_RS04950	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
C3F34_RS04955	COG1074	ATP-dependent DNA helicase activity
C3F34_RS04960	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
C3F34_RS04980	COG2226	methyltransferase
C3F34_RS04990	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
C3F34_RS05000	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
C3F34_RS05020	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
C3F34_RS05020	COG2111	Na H antiporter
C3F34_RS05025	COG1006	Multisubunit Na H antiporter MnhC subunit
C3F34_RS05030	COG0651	ATP synthesis coupled electron transport
C3F34_RS05035	COG1863	multisubunit Na H antiporter MnhE subunit
C3F34_RS05040	COG2212	antiporter activity
C3F34_RS05045	COG1320	monovalent cation:proton antiporter activity
C3F34_RS05050	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
C3F34_RS05055	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
C3F34_RS05060	COG0195	Participates in both transcription termination and antitermination
C3F34_RS05065	COG0779	Required for maturation of 30S ribosomal subunits
C3F34_RS05115	COG0237	dephospho-CoA kinase activity
C3F34_RS05125	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
C3F34_RS05130	COG3123	guanosine phosphorylase activity
C3F34_RS05135	COG0497	DNA recombination
C3F34_RS05145	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
C3F34_RS05160	COG1289	transmembrane transporter activity
C3F34_RS05170	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
C3F34_RS05185	COG1733	regulation of RNA biosynthetic process
C3F34_RS05240	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
C3F34_RS05270	COG0326	Molecular chaperone. Has ATPase activity
C3F34_RS05285	COG2056	Na+-H+ antiporter family
C3F34_RS05330	COG0081	regulation of translation
C3F34_RS05355	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
C3F34_RS05385	COG0546	phosphoglycolate phosphatase activity
C3F34_RS05390	COG1716	ATPase activity
C3F34_RS05415	COG0824	Thioesterase
C3F34_RS05435	COG0181	hydroxymethylbilane synthase activity
C3F34_RS05445	COG3275	phosphorelay sensor kinase activity
C3F34_RS05465	COG1538	Outer membrane efflux protein
C3F34_RS05480	COG0494	nUDIX hydrolase
C3F34_RS05490	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
C3F34_RS05495	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
C3F34_RS05500	COG0772	Belongs to the SEDS family
C3F34_RS05525	COG4974	Belongs to the 'phage' integrase family
C3F34_RS05530	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
C3F34_RS05540	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
C3F34_RS05555	COG1686	Belongs to the peptidase S11 family
C3F34_RS05560	COG2197	response regulator
C3F34_RS05565	COG3852	Histidine kinase
C3F34_RS05575	COG0793	Belongs to the peptidase S41A family
C3F34_RS05580	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
C3F34_RS05585	COG0795	lipopolysaccharide-transporting ATPase activity
C3F34_RS05590	COG0795	lipopolysaccharide-transporting ATPase activity
C3F34_RS05615	COG0586	Pfam SNARE associated Golgi protein
C3F34_RS05630	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
C3F34_RS05630	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
C3F34_RS05640	COG0004	ammonium transporteR
C3F34_RS05645	COG0347	Belongs to the P(II) protein family
C3F34_RS05655	COG0606	chelatase, subunit chli
C3F34_RS05670	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
C3F34_RS05685	COG0318	PFAM AMP-dependent synthetase and ligase
C3F34_RS05695	COG0477	Major facilitator Superfamily
C3F34_RS05700	COG2860	membrane
C3F34_RS05710	COG1253	flavin adenine dinucleotide binding
C3F34_RS05725	COG0477	Major facilitator Superfamily
C3F34_RS05735	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
C3F34_RS05755	COG2814	Major facilitator Superfamily
C3F34_RS05810	COG1652	LysM domain
C3F34_RS05815	COG0758	DNA mediated transformation
C3F34_RS05825	COG0697	spore germination
C3F34_RS05835	COG0386	Belongs to the glutathione peroxidase family
C3F34_RS05865	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
C3F34_RS05875	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
C3F34_RS05915	COG1121	(ABC) transporter
C3F34_RS05920	COG1108	ABC-type Mn2 Zn2 transport systems permease components
C3F34_RS05930	COG2837	iron assimilation
C3F34_RS05965	COG0281	malic enzyme
C3F34_RS06020	COG0518	GMP synthase (glutamine-hydrolyzing) activity
C3F34_RS06020	COG0519	Catalyzes the synthesis of GMP from XMP
C3F34_RS06025	COG2259	Doxx family
C3F34_RS06030	COG0586	Pfam SNARE associated Golgi protein
C3F34_RS06045	COG1192	Involved in chromosome partitioning
C3F34_RS06055	COG0271	Belongs to the BolA IbaG family
C3F34_RS06090	COG3756	Protein conserved in bacteria
C3F34_RS06120	COG1283	sodium-dependent phosphate transmembrane transporter activity
C3F34_RS06125	COG0842	Transport permease protein
C3F34_RS06130	COG1129	ABC transporter
C3F34_RS06130	COG0842	Transport permease protein
C3F34_RS06135	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
C3F34_RS06230	COG1113	amino acid transport
C3F34_RS06240	COG3724	N-succinylarginine dihydrolase activity
C3F34_RS06245	COG1012	belongs to the aldehyde dehydrogenase family
C3F34_RS06260	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
C3F34_RS06275	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
C3F34_RS06280	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
C3F34_RS06290	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
C3F34_RS06300	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
C3F34_RS06330	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
C3F34_RS06335	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
C3F34_RS06340	COG0166	Belongs to the GPI family
C3F34_RS06350	COG1210	Utp--glucose-1-phosphate uridylyltransferase
C3F34_RS06355	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
C3F34_RS06360	COG1216	Glycosyl transferase, family 2
C3F34_RS06380	COG2244	polysaccharide biosynthetic process
C3F34_RS06385	COG2089	acid synthase
C3F34_RS06400	COG1083	cytidylyl-transferase
C3F34_RS06405	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
C3F34_RS06410	COG1086	Polysaccharide biosynthesis protein
C3F34_RS06415	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
C3F34_RS06445	COG0728	peptidoglycan biosynthetic process
C3F34_RS06465	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
C3F34_RS06480	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
C3F34_RS06485	COG0546	phosphoglycolate phosphatase activity
C3F34_RS06490	COG1028	Short-chain dehydrogenase reductase Sdr
C3F34_RS06505	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
C3F34_RS06505	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
C3F34_RS06510	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
C3F34_RS06515	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
C3F34_RS06520	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
C3F34_RS06525	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
C3F34_RS06530	COG1116	anion transmembrane transporter activity
C3F34_RS06535	COG1309	transcriptional regulator
C3F34_RS06540	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
C3F34_RS06560	COG0196	riboflavin kinase activity
C3F34_RS06565	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
C3F34_RS06575	COG1047	Peptidyl-prolyl cis-trans
C3F34_RS06595	COG0129	dihydroxy-acid dehydratase activity
C3F34_RS06610	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
C3F34_RS06610	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
C3F34_RS06615	COG0428	transporter
C3F34_RS06625	COG0733	neurotransmitter:sodium symporter activity
C3F34_RS06680	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
C3F34_RS06685	COG0657	acetylesterase activity
C3F34_RS06700	COG0583	DNA-binding transcription factor activity
C3F34_RS06725	COG2951	lytic endotransglycosylase activity
C3F34_RS06745	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
C3F34_RS06760	COG0861	Integral membrane protein TerC family
C3F34_RS06765	COG0402	S-adenosylhomocysteine deaminase activity
C3F34_RS06780	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
C3F34_RS06785	COG1230	cation diffusion facilitator family transporter
C3F34_RS06800	COG2226	methyltransferase
C3F34_RS06810	COG0706	membrane insertase activity
C3F34_RS06815	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
C3F34_RS06830	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
C3F34_RS06835	COG0592	DNA-directed DNA polymerase activity
C3F34_RS06845	COG0187	DNA topoisomerase II activity
C3F34_RS06855	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
C3F34_RS06860	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
C3F34_RS06885	COG0488	(ABC) transporter
C3F34_RS06915	COG2814	Major facilitator Superfamily
C3F34_RS06920	COG2133	pyrroloquinoline quinone binding
C3F34_RS06935	COG2233	PERMEase
C3F34_RS06950	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
C3F34_RS06975	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
C3F34_RS06985	COG2814	Major facilitator Superfamily
C3F34_RS06990	COG0656	L-ascorbic acid biosynthetic process
C3F34_RS06995	COG0583	DNA-binding transcription factor activity
C3F34_RS07005	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
C3F34_RS07010	COG1064	alcohol dehydrogenase
C3F34_RS07015	COG2818	Glycosylase
C3F34_RS07030	COG1194	a g-specific adenine glycosylase
C3F34_RS07045	COG5487	UPF0391 membrane protein
C3F34_RS07050	COG2983	Belongs to the UPF0260 family
C3F34_RS07055	COG2819	hydrolase of the alpha beta superfamily
C3F34_RS07060	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
C3F34_RS07070	COG4160	amino acid transport
C3F34_RS07075	COG4215	(ABC) transporter
C3F34_RS07090	COG1522	sequence-specific DNA binding
C3F34_RS07095	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
C3F34_RS07105	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
C3F34_RS07115	COG1335	isochorismatase
C3F34_RS07120	COG0385	Bile acid
C3F34_RS07135	COG0560	Phosphoserine phosphatase
C3F34_RS07135	COG3830	Belongs to the UPF0237 family
C3F34_RS07200	COG0534	Mate efflux family protein
C3F34_RS07205	COG0436	Aminotransferase
C3F34_RS07210	COG2733	membrane
C3F34_RS07225	COG2918	glutathione biosynthetic process
C3F34_RS07230	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
C3F34_RS07240	COG3150	esterase
C3F34_RS07320	COG3706	GGDEF domain
C3F34_RS07325	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
C3F34_RS07345	COG0708	Exodeoxyribonuclease III
C3F34_RS07355	COG0583	DNA-binding transcription factor activity
C3F34_RS07360	COG1335	isochorismatase
C3F34_RS07390	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
C3F34_RS07400	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
C3F34_RS07435	COG0508	dehydrogenase complex catalyzes the overall conversion of
C3F34_RS07445	COG2119	membrane
C3F34_RS07450	COG0426	domain, Protein
C3F34_RS07450	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
C3F34_RS07470	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
C3F34_RS07495	COG1902	pentaerythritol trinitrate reductase activity
C3F34_RS07500	COG1519	Transferase
C3F34_RS07505	COG1385	rRNA (uridine-N3-)-methyltransferase activity
C3F34_RS07510	COG0668	transmembrane transport
C3F34_RS07520	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
C3F34_RS07535	COG0431	NADPH-dependent FMN reductase
C3F34_RS07550	COG0784	Response regulator, receiver
C3F34_RS07550	COG2198	Histidine kinase
C3F34_RS07550	COG2205	protein histidine kinase activity
C3F34_RS07555	COG3162	membrane
C3F34_RS07570	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
C3F34_RS07600	COG3706	GGDEF domain
C3F34_RS07635	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
C3F34_RS07640	COG1309	transcriptional regulator
C3F34_RS07645	COG1063	alcohol dehydrogenase
C3F34_RS07660	COG0300	oxidoreductase activity
C3F34_RS07665	COG0789	Transcriptional regulator
C3F34_RS07670	COG0352	thiamine-phosphate diphosphorylase activity
C3F34_RS07670	COG0351	phosphomethylpyrimidine kinase
C3F34_RS07670	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
C3F34_RS07680	COG2814	Major facilitator Superfamily
C3F34_RS07685	COG0629	single-stranded DNA binding
C3F34_RS07690	COG1113	amino acid transport
C3F34_RS07700	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
C3F34_RS07705	COG1012	belongs to the aldehyde dehydrogenase family
C3F34_RS07720	COG1335	isochorismatase
C3F34_RS07750	COG2814	Major facilitator Superfamily
C3F34_RS07755	COG0583	DNA-binding transcription factor activity
C3F34_RS07780	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
C3F34_RS07785	COG1960	acyl-CoA dehydrogenase activity
C3F34_RS07790	COG1024	Enoyl-CoA hydratase
C3F34_RS07815	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
C3F34_RS07870	COG0582	viral genome integration into host DNA
C3F34_RS07900	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
C3F34_RS07920	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
C3F34_RS07940	COG0531	amino acid
C3F34_RS07945	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
C3F34_RS07965	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
C3F34_RS07970	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
C3F34_RS08005	COG0427	acetyl-CoA hydrolase
C3F34_RS08030	COG4221	oxidoreductase activity
C3F34_RS08035	COG2873	o-acetylhomoserine
C3F34_RS08040	COG0488	(ABC) transporter
C3F34_RS08105	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
C3F34_RS08110	COG0275	rRNA processing
C3F34_RS08125	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
C3F34_RS08130	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
C3F34_RS08140	COG2226	methyltransferase
C3F34_RS08190	COG0067	glutamate synthase
C3F34_RS08190	COG0070	glutamate synthase
C3F34_RS08190	COG0069	glutamate synthase activity
C3F34_RS08195	COG0493	'glutamate synthase
C3F34_RS08205	COG1704	LemA family
C3F34_RS08210	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
C3F34_RS08220	COG4969	Belongs to the N-Me-Phe pilin family
C3F34_RS08225	COG4969	Belongs to the N-Me-Phe pilin family
C3F34_RS08230	COG3307	-O-antigen
C3F34_RS08235	COG3307	-O-antigen
C3F34_RS08255	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
C3F34_RS08260	COG1758	RNA polymerase activity
C3F34_RS08265	COG0194	GDP metabolic process
C3F34_RS08310	COG0228	four-way junction DNA binding
C3F34_RS08315	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
C3F34_RS08325	COG0335	large ribosomal subunit rRNA binding
C3F34_RS08335	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
C3F34_RS08340	COG5380	lipid catabolic process
C3F34_RS08345	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
C3F34_RS08365	COG5006	permease, DMT superfamily
C3F34_RS08370	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
C3F34_RS08375	COG0277	FAD linked oxidase domain protein
C3F34_RS08385	COG2197	response regulator
C3F34_RS08395	COG0477	Major facilitator Superfamily
C3F34_RS08405	COG2814	Major facilitator Superfamily
C3F34_RS08410	COG1289	transmembrane transporter activity
C3F34_RS08415	COG2032	superoxide dismutase activity
C3F34_RS08420	COG0628	permease
C3F34_RS08425	COG1192	Involved in chromosome partitioning
C3F34_RS08435	COG2226	methyltransferase
C3F34_RS08450	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
C3F34_RS08455	COG0254	rRNA binding
C3F34_RS08460	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
C3F34_RS08465	COG0534	Mate efflux family protein
C3F34_RS08475	COG0635	Involved in the biosynthesis of porphyrin-containing compound
C3F34_RS08495	COG1960	acyl-CoA dehydrogenase activity
C3F34_RS08515	COG0408	coproporphyrinogen oxidase activity
C3F34_RS08520	COG0635	Involved in the biosynthesis of porphyrin-containing compound
C3F34_RS08540	COG0513	Belongs to the DEAD box helicase family
C3F34_RS08545	COG1127	ABC transporter
C3F34_RS08550	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
C3F34_RS08555	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
C3F34_RS08570	COG0598	Magnesium transport protein CorA
C3F34_RS08585	COG1040	competence protein
C3F34_RS08590	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
C3F34_RS08610	COG2267	carboxylic ester hydrolase activity
C3F34_RS08615	COG2937	Belongs to the GPAT DAPAT family
C3F34_RS08620	COG1946	Acyl-CoA thioesterase
C3F34_RS08625	COG1301	dicarboxylic acid transport
C3F34_RS08645	COG1959	2 iron, 2 sulfur cluster binding
C3F34_RS08655	COG0433	COG0433 Predicted ATPase
C3F34_RS08660	COG0626	cystathionine gamma-synthase activity
C3F34_RS08680	COG0088	Forms part of the polypeptide exit tunnel
C3F34_RS08685	COG0089	rRNA binding
C3F34_RS08695	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
C3F34_RS08735	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
C3F34_RS08745	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
C3F34_RS08750	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
C3F34_RS08760	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
C3F34_RS08785	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
C3F34_RS08795	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
C3F34_RS08805	COG0203	ribosomal protein L17
C3F34_RS08810	COG2072	flavoprotein involved in K transport
C3F34_RS08815	COG1960	acyl-CoA dehydrogenase activity
C3F34_RS08820	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
C3F34_RS08860	COG0339	signal peptide processing
C3F34_RS08870	COG0557	exoribonuclease II activity
C3F34_RS08905	COG0179	Fumarylacetoacetate (FAA) hydrolase
C3F34_RS08935	COG1295	ribonuclease BN
C3F34_RS08985	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
C3F34_RS08990	COG1702	phosphate starvation-inducible protein PhoH
C3F34_RS09000	COG0739	heme binding
C3F34_RS09000	COG0741	lytic transglycosylase activity
C3F34_RS09000	COG1196	nuclear chromosome segregation
C3F34_RS09035	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
C3F34_RS09040	COG1183	phosphatidylcholine synthase activity
C3F34_RS09080	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
C3F34_RS09110	COG1607	acyl-coa hydrolase
C3F34_RS09120	COG1666	GTP binding
C3F34_RS09140	COG2350	Protein conserved in bacteria
C3F34_RS09155	COG0625	glutathione transferase activity
C3F34_RS09160	COG3781	membrane
C3F34_RS09165	COG2003	Belongs to the UPF0758 family
C3F34_RS09170	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
C3F34_RS09175	COG3783	Cytochrome b(562)
C3F34_RS09205	COG1162	GTPase activity
C3F34_RS09210	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
C3F34_RS09225	COG1538	Outer membrane efflux protein
C3F34_RS09230	COG0577	efflux transmembrane transporter activity
C3F34_RS09230	COG1136	(ABC) transporter
C3F34_RS09235	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
C3F34_RS09260	COG0028	Belongs to the TPP enzyme family
C3F34_RS09265	COG0440	acetolactate synthase activity
C3F34_RS09305	COG2975	iron-sulfur cluster assembly
C3F34_RS09345	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
C3F34_RS09370	COG1862	Preprotein translocase
C3F34_RS09385	COG1704	LemA family
C3F34_RS09395	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
C3F34_RS09460	COG1113	amino acid transport
C3F34_RS09470	COG0625	glutathione transferase activity
C3F34_RS09490	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
C3F34_RS09495	COG1522	sequence-specific DNA binding
C3F34_RS09500	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
C3F34_RS09515	COG0084	hydrolase, TatD family'
C3F34_RS09530	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
C3F34_RS09540	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
C3F34_RS09550	COG0641	radical SAM
C3F34_RS09555	COG3119	arylsulfatase activity
C3F34_RS09565	COG2814	Major facilitator Superfamily
C3F34_RS09575	COG0789	Transcriptional regulator
C3F34_RS09580	COG0697	spore germination
C3F34_RS09620	COG0004	ammonium transporteR
C3F34_RS09635	COG3622	Belongs to the hyi family
C3F34_RS09640	COG2084	Dehydrogenase
C3F34_RS09645	COG1024	Enoyl-CoA hydratase
C3F34_RS09650	COG0784	Response regulator, receiver
C3F34_RS09650	COG2205	protein histidine kinase activity
C3F34_RS09650	COG5002	protein histidine kinase activity
C3F34_RS09655	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
C3F34_RS09670	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
C3F34_RS09675	COG3956	TIGRFAM MazG family protein
C3F34_RS09680	COG1555	photosystem II stabilization
C3F34_RS09685	COG0617	tRNA 3'-terminal CCA addition
C3F34_RS09690	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
C3F34_RS09705	COG1660	Displays ATPase and GTPase activities
C3F34_RS09715	COG3028	Belongs to the UPF0307 family
C3F34_RS09720	COG0318	PFAM AMP-dependent synthetase and ligase
C3F34_RS09735	COG0625	glutathione transferase activity
C3F34_RS09755	COG1238	metal cluster binding
C3F34_RS09790	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
C3F34_RS09795	COG0072	phenylalanine-tRNA ligase activity
C3F34_RS09820	COG0248	Ppx GppA phosphatase
C3F34_RS09830	COG0037	tRNA processing
C3F34_RS09845	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
C3F34_RS09845	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
C3F34_RS09875	COG1764	response to oxidative stress
C3F34_RS09880	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
C3F34_RS09945	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
C3F34_RS09955	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
C3F34_RS10025	COG1214	PFAM Peptidase M22, glycoprotease
C3F34_RS10030	COG1968	undecaprenyl-diphosphatase activity
C3F34_RS10045	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
C3F34_RS10055	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
C3F34_RS10065	COG2132	Multicopper oxidase
C3F34_RS10085	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
C3F34_RS10095	COG0351	phosphomethylpyrimidine kinase
C3F34_RS10095	COG0352	thiamine-phosphate diphosphorylase activity
C3F34_RS10095	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
C3F34_RS10125	COG0251	oxidation-reduction process
C3F34_RS10130	COG1113	amino acid transport
C3F34_RS10140	COG1981	membrane
C3F34_RS10155	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
C3F34_RS10165	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
C3F34_RS10170	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
C3F34_RS10180	COG0456	acetyltransferase
C3F34_RS10190	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
C3F34_RS10195	COG0492	ferredoxin-NADP+ reductase activity
C3F34_RS10200	COG1674	ftsk spoiiie
C3F34_RS10220	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
C3F34_RS10225	COG2894	cell division
C3F34_RS10230	COG0850	regulation of cytokinetic process
C3F34_RS10240	COG0204	Acyl-transferase
C3F34_RS10245	COG2885	chlorophyll binding
C3F34_RS10250	COG0210	DNA helicase
C3F34_RS10255	COG0756	dUTP diphosphatase activity
C3F34_RS10260	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
C3F34_RS10265	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
C3F34_RS10275	COG0121	glutamine amidotransferase
C3F34_RS10290	COG2914	Belongs to the UPF0125 (RnfH) family
C3F34_RS10295	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
C3F34_RS10300	COG0735	belongs to the Fur family
C3F34_RS10310	COG0420	3'-5' exonuclease activity
C3F34_RS10325	COG1090	epimerase
C3F34_RS10340	COG2050	protein possibly involved in aromatic compounds catabolism
C3F34_RS10350	COG2814	Major facilitator Superfamily
C3F34_RS10355	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
C3F34_RS10365	COG0582	viral genome integration into host DNA
C3F34_RS10375	COG0629	single-stranded DNA binding
C3F34_RS10535	COG4416	COG NOG18757 non supervised orthologous group
C3F34_RS10590	COG4695	Portal protein
C3F34_RS10595	COG0582	viral genome integration into host DNA
C3F34_RS10645	COG0583	DNA-binding transcription factor activity
C3F34_RS10660	COG1012	belongs to the aldehyde dehydrogenase family
C3F34_RS10665	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
C3F34_RS10810	COG4264	IucA IucC family
C3F34_RS10820	COG2814	Major facilitator Superfamily
C3F34_RS10830	COG4264	IucA IucC family
C3F34_RS10890	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
C3F34_RS10900	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
C3F34_RS10905	COG0642	Histidine kinase
C3F34_RS10935	COG3046	protein related to deoxyribodipyrimidine photolyase
C3F34_RS10945	COG0583	DNA-binding transcription factor activity
C3F34_RS10960	COG1414	Transcriptional regulator
C3F34_RS10965	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
C3F34_RS10985	COG2814	Major facilitator Superfamily
C3F34_RS10990	COG2030	dehydratase
C3F34_RS10990	COG1012	belongs to the aldehyde dehydrogenase family
C3F34_RS10995	COG3396	Phenylacetate-CoA oxygenase
C3F34_RS11000	COG3460	Phenylacetate-CoA oxygenase
C3F34_RS11005	COG3396	Phenylacetate-CoA oxygenase
C3F34_RS11010	COG2151	metal-sulfur cluster biosynthetic enzyme
C3F34_RS11015	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
C3F34_RS11020	COG1024	Enoyl-CoA hydratase
C3F34_RS11025	COG1024	Enoyl-CoA hydratase
C3F34_RS11030	COG1250	3-hydroxyacyl-CoA dehydrogenase
C3F34_RS11035	COG0183	Belongs to the thiolase family
C3F34_RS11040	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
C3F34_RS11045	COG3327	negative regulation of DNA-templated transcription, initiation
C3F34_RS11065	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
C3F34_RS11065	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
C3F34_RS11075	COG0489	protein tyrosine kinase activity
C3F34_RS11115	COG0442	prolyl-tRNA aminoacylation
C3F34_RS11125	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
C3F34_RS11150	COG0840	transmembrane signaling receptor activity
C3F34_RS11165	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
C3F34_RS11180	COG2832	Protein of unknown function (DUF454)
C3F34_RS11240	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
C3F34_RS11250	COG1289	transmembrane transporter activity
C3F34_RS11255	COG2814	Major facilitator Superfamily
C3F34_RS11280	COG0110	maltose O-acetyltransferase activity
C3F34_RS11285	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
C3F34_RS11300	COG0505	Belongs to the CarA family
C3F34_RS11325	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
C3F34_RS11330	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
C3F34_RS11370	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
C3F34_RS11385	COG0477	Major facilitator Superfamily
C3F34_RS11400	COG1274	phosphoenolpyruvate carboxykinase (GTP) activity
C3F34_RS11405	COG1597	lipid kinase activity
C3F34_RS11410	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
C3F34_RS11430	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
C3F34_RS11445	COG1196	nuclear chromosome segregation
C3F34_RS11445	COG0741	lytic transglycosylase activity
C3F34_RS11445	COG0739	heme binding
C3F34_RS11450	COG0037	tRNA processing
C3F34_RS11460	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
C3F34_RS11465	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
C3F34_RS11525	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
C3F34_RS11605	COG2831	hemolysin activation secretion protein
C3F34_RS11610	COG3210	domain, Protein
C3F34_RS11675	COG0006	proline dipeptidase activity
C3F34_RS11680	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
C3F34_RS11685	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
C3F34_RS11715	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
C3F34_RS11720	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
C3F34_RS11760	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
C3F34_RS11765	COG0741	lytic transglycosylase activity
C3F34_RS11765	COG1388	LysM domain
C3F34_RS11770	COG4166	transmembrane transport
C3F34_RS11775	COG4174	ABC transporter (Permease)
C3F34_RS11780	COG4239	(ABC) transporter, permease
C3F34_RS11785	COG4172	Belongs to the ABC transporter superfamily
C3F34_RS11795	COG0625	glutathione transferase activity
C3F34_RS11815	COG0833	amino acid
C3F34_RS11830	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
C3F34_RS11835	COG0418	dihydroorotase activity
C3F34_RS11845	COG1620	l-lactate permease
C3F34_RS11850	COG2186	Transcriptional regulator
C3F34_RS11860	COG0277	FAD linked oxidase domain protein
C3F34_RS11865	COG1902	pentaerythritol trinitrate reductase activity
C3F34_RS11865	COG0446	pyridine nucleotide-disulphide oxidoreductase
C3F34_RS11885	COG1309	transcriptional regulator
C3F34_RS11900	COG1053	succinate dehydrogenase
C3F34_RS11905	COG0583	DNA-binding transcription factor activity
C3F34_RS11925	COG0583	DNA-binding transcription factor activity
C3F34_RS11940	COG0242	peptide deformylase activity
C3F34_RS11950	COG2223	nitrite transmembrane transporter activity
C3F34_RS11970	COG2852	Protein conserved in bacteria
C3F34_RS11985	COG0306	phosphate transporter
C3F34_RS11995	COG1215	transferase activity, transferring glycosyl groups
C3F34_RS12000	COG0726	polysaccharide deacetylase
C3F34_RS12000	COG1649	PFAM Uncharacterised BCR, COG1649
C3F34_RS12010	COG0583	DNA-binding transcription factor activity
C3F34_RS12020	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
C3F34_RS12025	COG1773	rubredoxin
C3F34_RS12030	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
C3F34_RS12055	COG1741	Belongs to the pirin family
C3F34_RS12065	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
C3F34_RS12070	COG3739	integral membrane protein
C3F34_RS12085	COG1393	Belongs to the ArsC family
C3F34_RS12090	COG0640	Transcriptional regulator
C3F34_RS12095	COG0798	PFAM Bile acid sodium symporter
C3F34_RS12100	COG0431	NADPH-dependent FMN reductase
C3F34_RS12105	COG0302	gtp cyclohydrolase
C3F34_RS12125	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
C3F34_RS12130	COG0512	Glutamine amidotransferase of anthranilate synthase
C3F34_RS12145	COG2249	NAD(P)H dehydrogenase (quinone) activity
C3F34_RS12175	COG0523	cobalamin synthesis protein
C3F34_RS12180	COG4681	YaeQ
C3F34_RS12200	COG2199	diguanylate cyclase activity
C3F34_RS12200	COG2203	Gaf domain
C3F34_RS12270	COG4181	ATPase activity
C3F34_RS12275	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
C3F34_RS12280	COG0705	Rhomboid family
C3F34_RS12280	COG0457	Tetratricopeptide repeat
C3F34_RS12285	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
C3F34_RS12325	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
C3F34_RS12330	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
C3F34_RS12340	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
C3F34_RS12340	COG0604	alcohol dehydrogenase
C3F34_RS12340	COG4221	oxidoreductase activity
C3F34_RS12340	COG3321	synthase
C3F34_RS12350	COG1253	flavin adenine dinucleotide binding
C3F34_RS12385	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
C3F34_RS12395	COG0280	phosphate acetyltransferase
C3F34_RS12395	COG0281	malic enzyme
C3F34_RS12405	COG1385	rRNA (uridine-N3-)-methyltransferase activity
C3F34_RS12410	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
C3F34_RS12415	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
C3F34_RS12455	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
C3F34_RS12460	COG0778	Nitroreductase
C3F34_RS12465	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
C3F34_RS12470	COG1056	cytidyltransferase-related domain
C3F34_RS12470	COG1051	belongs to the nudix hydrolase family
C3F34_RS12475	COG2353	YceI-like domain
C3F34_RS12480	COG0583	DNA-binding transcription factor activity
C3F34_RS12485	COG1279	arginine transmembrane transporter activity
C3F34_RS12490	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
C3F34_RS12505	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
C3F34_RS12510	COG0602	queuosine metabolic process
C3F34_RS12530	COG0583	DNA-binding transcription factor activity
C3F34_RS12535	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
C3F34_RS12540	COG4208	sulfate ABC transporter
C3F34_RS12555	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
C3F34_RS12560	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
C3F34_RS12565	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
C3F34_RS12585	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
C3F34_RS12595	COG0481	GTPase activity
C3F34_RS12600	COG0681	Belongs to the peptidase S26 family
C3F34_RS12610	COG0571	ribonuclease III activity
C3F34_RS12615	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
C3F34_RS12630	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
C3F34_RS12670	COG0436	Aminotransferase
C3F34_RS12680	COG2199	diguanylate cyclase activity
C3F34_RS12695	COG0556	nucleotide-excision repair
C3F34_RS12725	COG1733	regulation of RNA biosynthetic process
C3F34_RS12740	COG0671	phosphoesterase, PA-phosphatase related
C3F34_RS12745	COG4772	TonB-dependent receptor
C3F34_RS12755	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
C3F34_RS12760	COG0076	glutamate decarboxylase activity
C3F34_RS12765	COG1522	sequence-specific DNA binding
C3F34_RS12770	COG3961	Belongs to the TPP enzyme family
C3F34_RS12775	COG1113	amino acid transport
C3F34_RS12780	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
C3F34_RS12785	COG0573	inorganic phosphate transmembrane transporter activity
C3F34_RS12795	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
C3F34_RS12800	COG0616	signal peptide processing
C3F34_RS12835	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
C3F34_RS12840	COG1686	Belongs to the peptidase S11 family
C3F34_RS12855	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
C3F34_RS12860	COG4942	peptidase
C3F34_RS12865	COG0583	DNA-binding transcription factor activity
C3F34_RS12870	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
C3F34_RS12875	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
C3F34_RS12905	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
C3F34_RS12930	COG2986	histidine ammonia-lyase
C3F34_RS12960	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
C3F34_RS12970	COG1028	Short-chain dehydrogenase reductase Sdr
C3F34_RS12975	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
C3F34_RS12995	COG2070	2-Nitropropane dioxygenase
C3F34_RS13030	COG1067	ATP-dependent peptidase activity
C3F34_RS13070	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
C3F34_RS13075	COG1966	Carbon starvation protein
C3F34_RS13080	COG2879	small protein
C3F34_RS13085	COG0714	Associated with various cellular activities
C3F34_RS13140	COG5377	YqaJ viral recombinase family
C3F34_RS13210	COG1484	DNA-dependent DNA replication
C3F34_RS13370	COG3549	Plasmid maintenance system killer
C3F34_RS13375	COG3093	addiction module antidote protein HigA
C3F34_RS13430	COG0582	viral genome integration into host DNA
C3F34_RS13445	COG4983	Phage plasmid primase, P4 family domain protein
C3F34_RS13460	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
C3F34_RS13485	COG1401	restriction endodeoxyribonuclease activity
C3F34_RS13500	COG2252	PERMEase
C3F34_RS13505	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
C3F34_RS13510	COG3038	cytochrome b561
C3F34_RS13525	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
C3F34_RS13545	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
C3F34_RS13565	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
C3F34_RS13580	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
C3F34_RS13595	COG0667	Aldo Keto reductase
C3F34_RS13605	COG1765	OsmC-like protein
C3F34_RS13635	COG0116	Belongs to the methyltransferase superfamily
C3F34_RS13635	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
C3F34_RS13650	COG0540	Belongs to the ATCase OTCase family
C3F34_RS13660	COG2885	chlorophyll binding
C3F34_RS13660	COG3047	cAMP biosynthetic process
C3F34_RS13680	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
C3F34_RS13685	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
C3F34_RS13685	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
C3F34_RS13690	COG1254	Belongs to the acylphosphatase family
C3F34_RS13740	COG4774	siderophore transport
C3F34_RS13770	COG0010	Belongs to the arginase family
C3F34_RS13775	COG0546	phosphoglycolate phosphatase activity
C3F34_RS13785	COG0174	glutamine synthetase
C3F34_RS13805	COG1944	ATP diphosphatase activity
C3F34_RS13810	COG1252	NADH dehydrogenase
C3F34_RS13820	COG2175	clavaminate synthase activity
C3F34_RS13825	COG3246	L-lysine catabolic process to acetate
C3F34_RS13845	COG2855	membrane
C3F34_RS13870	COG0789	Transcriptional regulator
C3F34_RS14235	COG0517	IMP dehydrogenase activity
C3F34_RS14235	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
C3F34_RS14240	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
C3F34_RS14250	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
C3F34_RS14255	COG1137	ATPase activity
C3F34_RS14275	COG4122	O-methyltransferase activity
C3F34_RS14285	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
C3F34_RS14315	COG0583	DNA-binding transcription factor activity
C3F34_RS14320	COG0477	Major facilitator Superfamily
C3F34_RS14360	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
C3F34_RS14370	COG1294	oxidase, subunit
C3F34_RS14375	COG1271	oxidase subunit
C3F34_RS14385	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
C3F34_RS14395	COG1346	cytolysis
C3F34_RS14405	COG3284	Transcriptional regulator
C3F34_RS14435	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
C3F34_RS14440	COG0235	Class ii aldolase
C3F34_RS14445	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
C3F34_RS14455	COG3135	benzoate transporter
C3F34_RS14480	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
C3F34_RS14485	COG2207	Transcriptional regulator
C3F34_RS14500	COG1028	Short-chain dehydrogenase reductase Sdr
C3F34_RS14510	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
C3F34_RS14525	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
C3F34_RS14530	COG0183	Belongs to the thiolase family
C3F34_RS14540	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
C3F34_RS14545	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
C3F34_RS14555	COG4829	muconolactone delta-isomerase
C3F34_RS14560	COG4948	Mandelate Racemase Muconate Lactonizing
C3F34_RS14565	COG0583	DNA-binding transcription factor activity
C3F34_RS14585	COG0154	amidase activity
C3F34_RS14605	COG4638	Rieske (2fe-2S)
C3F34_RS14615	COG1028	Short-chain dehydrogenase reductase Sdr
C3F34_RS14625	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
C3F34_RS14630	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
C3F34_RS14630	COG0543	2 iron, 2 sulfur cluster binding
C3F34_RS14635	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
C3F34_RS14640	COG4638	Rieske (2fe-2S)
C3F34_RS14655	COG2204	response regulator
C3F34_RS14665	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
C3F34_RS14665	COG3453	Protein conserved in bacteria
C3F34_RS14695	COG4382	Mu-like prophage protein Gp16
C3F34_RS14795	COG4373	Mu-like prophage FluMu protein gp28
C3F34_RS14820	COG4383	Mu-like prophage protein gp29
C3F34_RS14845	COG4397	Mu-like prophage major head subunit gpT
C3F34_RS14915	COG3299	homolog of phage Mu protein gp47
C3F34_RS14950	COG1028	Short-chain dehydrogenase reductase Sdr
C3F34_RS14955	COG1802	Transcriptional regulator
C3F34_RS15010	COG2308	Evidence 4 Homologs of previously reported genes of
C3F34_RS15020	COG1305	Transglutaminase-like
C3F34_RS15040	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
C3F34_RS15060	COG0360	Binds together with S18 to 16S ribosomal RNA
C3F34_RS15065	COG0109	protoheme IX farnesyltransferase activity
C3F34_RS15070	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
C3F34_RS15075	COG1845	cytochrome c oxidase, subunit III
C3F34_RS15080	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
C3F34_RS15085	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
C3F34_RS15110	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
C3F34_RS15125	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
C3F34_RS15130	COG2890	protein-(glutamine-N5) methyltransferase activity
C3F34_RS15135	COG3781	membrane
C3F34_RS15155	COG1960	acyl-CoA dehydrogenase activity
C3F34_RS15160	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
C3F34_RS15190	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
C3F34_RS15200	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
C3F34_RS15225	COG0729	surface antigen
C3F34_RS15230	COG2911	Protein conserved in bacteria
C3F34_RS15255	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
C3F34_RS15305	COG0471	metal ion transport
C3F34_RS15345	COG0308	aminopeptidase N
C3F34_RS15395	COG3135	benzoate transporter
C3F34_RS15405	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
C3F34_RS15410	COG0583	DNA-binding transcription factor activity
C3F34_RS15420	COG0586	Pfam SNARE associated Golgi protein
C3F34_RS15430	COG1028	Short-chain dehydrogenase reductase Sdr
C3F34_RS15440	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
C3F34_RS15445	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
C3F34_RS15450	COG0824	Thioesterase
C3F34_RS15455	COG1454	alcohol dehydrogenase
C3F34_RS15460	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
C3F34_RS15480	COG0069	glutamate synthase activity
C3F34_RS15485	COG2197	response regulator
C3F34_RS15490	COG4585	Histidine kinase
C3F34_RS15495	COG2850	peptidyl-arginine hydroxylation
C3F34_RS15500	COG0424	maF-like protein
C3F34_RS15525	COG0697	spore germination
C3F34_RS15540	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
C3F34_RS15550	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
C3F34_RS15560	COG3698	Phosphodiester glycosidase
C3F34_RS15585	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
C3F34_RS15595	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
C3F34_RS15625	COG0316	Belongs to the HesB IscA family
C3F34_RS15630	COG0822	iron-sulfur transferase activity
C3F34_RS15655	COG0776	regulation of translation
C3F34_RS15660	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
C3F34_RS15720	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
C3F34_RS15740	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
C3F34_RS15750	COG0133	tryptophan synthase activity
C3F34_RS15755	COG0517	IMP dehydrogenase activity
C3F34_RS15755	COG0516	GMP reductase activity
C3F34_RS15780	COG0612	Peptidase, M16
C3F34_RS15790	COG0552	protein localization to endoplasmic reticulum
C3F34_RS15845	COG2814	Major facilitator Superfamily
C3F34_RS15855	COG3706	GGDEF domain
C3F34_RS15865	COG0439	Biotin carboxylase
C3F34_RS15870	COG0511	ligase activity, forming carbon-carbon bonds
C3F34_RS15915	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
C3F34_RS15920	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
C3F34_RS15940	COG0583	DNA-binding transcription factor activity
C3F34_RS15945	COG1960	acyl-CoA dehydrogenase activity
C3F34_RS16000	COG0697	spore germination
C3F34_RS16005	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
C3F34_RS16010	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
C3F34_RS16015	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
C3F34_RS16030	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
C3F34_RS16035	COG2814	Major facilitator Superfamily
C3F34_RS16040	COG0509	glycine decarboxylation via glycine cleavage system
C3F34_RS16055	COG1132	(ABC) transporter
C3F34_RS16065	COG1280	lysine exporter protein (LysE YggA)
C3F34_RS16075	COG0668	transmembrane transport
C3F34_RS16080	COG3122	Protein conserved in bacteria
C3F34_RS16100	COG0640	Transcriptional regulator
C3F34_RS16105	COG2937	Belongs to the GPAT DAPAT family
C3F34_RS16110	COG0596	Alpha beta hydrolase
C3F34_RS16115	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
C3F34_RS16120	COG1335	isochorismatase
C3F34_RS16125	COG0251	oxidation-reduction process
C3F34_RS16130	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
C3F34_RS16135	COG2233	PERMEase
C3F34_RS16140	COG2084	Dehydrogenase
C3F34_RS16145	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
C3F34_RS16155	COG4770	biotin carboxylase activity
C3F34_RS16160	COG1024	Enoyl-CoA hydratase
C3F34_RS16165	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
C3F34_RS16170	COG1960	acyl-CoA dehydrogenase activity
C3F34_RS16175	COG1309	transcriptional regulator
C3F34_RS16180	COG0318	PFAM AMP-dependent synthetase and ligase
C3F34_RS16190	COG2226	methyltransferase
C3F34_RS16200	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
C3F34_RS16200	COG1116	anion transmembrane transporter activity
C3F34_RS16210	COG2223	nitrite transmembrane transporter activity
C3F34_RS16215	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
C3F34_RS16220	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
C3F34_RS16225	COG0243	molybdopterin cofactor binding
C3F34_RS16235	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
C3F34_RS16250	COG0315	cyclic pyranopterin monophosphate synthase activity
C3F34_RS16250	COG0521	Mo-molybdopterin cofactor biosynthetic process
C3F34_RS16255	COG0303	'Molybdopterin
C3F34_RS16260	COG0725	ABC transporter, periplasmic molybdate-binding protein
C3F34_RS16265	COG4149	molybdate abc transporter
C3F34_RS16270	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
C3F34_RS16280	COG0475	glutathione-regulated potassium exporter activity
C3F34_RS16280	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
C3F34_RS16300	COG1131	(ABC) transporter
C3F34_RS16305	COG0842	Transport permease protein
C3F34_RS16310	COG0842	Transport permease protein
C3F34_RS16320	COG0583	DNA-binding transcription factor activity
C3F34_RS16360	COG1960	acyl-CoA dehydrogenase activity
C3F34_RS16365	COG1021	2,3-dihydroxybenzoate-AMP ligase
C3F34_RS16370	COG1012	belongs to the aldehyde dehydrogenase family
C3F34_RS16375	COG1024	Enoyl-CoA hydratase
C3F34_RS16380	COG2814	Major facilitator Superfamily
C3F34_RS16395	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
C3F34_RS16410	COG1262	PFAM Formylglycine-generating sulfatase enzyme
C3F34_RS16445	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
C3F34_RS16465	COG1113	amino acid transport
C3F34_RS16485	COG1301	dicarboxylic acid transport
C3F34_RS16505	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
C3F34_RS16520	COG0019	diaminopimelate decarboxylase activity
C3F34_RS16525	COG0318	PFAM AMP-dependent synthetase and ligase
C3F34_RS16535	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
C3F34_RS16540	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
C3F34_RS16550	COG1846	Transcriptional regulator
C3F34_RS16570	COG0583	DNA-binding transcription factor activity
C3F34_RS16575	COG1538	Outer membrane efflux protein
C3F34_RS16590	COG0583	DNA-binding transcription factor activity
C3F34_RS16600	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
C3F34_RS16605	COG1773	rubredoxin
C3F34_RS16640	COG0625	glutathione transferase activity
C3F34_RS16650	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
C3F34_RS16655	COG1473	amidohydrolase
C3F34_RS16660	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
C3F34_RS16665	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
C3F34_RS16680	COG0765	amino acid transport
C3F34_RS16685	COG1126	abc transporter atp-binding protein
C3F34_RS16700	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
C3F34_RS16705	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
C3F34_RS16710	COG0022	dehydrogenase e1 component
C3F34_RS16715	COG0508	dehydrogenase complex catalyzes the overall conversion of
C3F34_RS16720	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
C3F34_RS16730	COG1063	alcohol dehydrogenase
C3F34_RS16755	COG4628	conserved protein (DUF2132)
C3F34_RS16760	COG1309	transcriptional regulator
C3F34_RS16765	COG0604	alcohol dehydrogenase
C3F34_RS16845	COG0596	Alpha beta hydrolase
C3F34_RS16865	COG0583	DNA-binding transcription factor activity
C3F34_RS16870	COG1380	Effector of murein hydrolase LrgA
C3F34_RS16875	COG1346	cytolysis
C3F34_RS16890	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
C3F34_RS16905	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
C3F34_RS16920	COG1278	Cold shock
C3F34_RS16940	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
C3F34_RS16945	COG2267	carboxylic ester hydrolase activity
C3F34_RS16950	COG2453	phosphatase
C3F34_RS16950	COG0671	phosphoesterase, PA-phosphatase related
C3F34_RS16965	COG4589	Belongs to the CDS family
C3F34_RS17010	COG0542	response to heat
C3F34_RS17015	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
C3F34_RS17030	COG3706	GGDEF domain
C3F34_RS17040	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
C3F34_RS17045	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
C3F34_RS17055	COG0569	domain protein
C3F34_RS17060	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
C3F34_RS17080	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
C3F34_RS17090	COG1585	Membrane protein implicated in regulation of membrane protease activity
C3F34_RS17110	COG1294	oxidase, subunit
C3F34_RS17115	COG4890	Cyd operon protein YbgT
C3F34_RS17150	COG1960	acyl-CoA dehydrogenase activity
C3F34_RS17155	COG1960	acyl-CoA dehydrogenase activity
C3F34_RS17160	COG0456	acetyltransferase
C3F34_RS17165	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
C3F34_RS17170	COG2207	Transcriptional regulator
C3F34_RS17175	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
C3F34_RS17180	COG4773	Receptor
C3F34_RS17200	COG0730	response to heat
C3F34_RS17205	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
C3F34_RS17230	COG0772	Belongs to the SEDS family
C3F34_RS17245	COG0148	phosphopyruvate hydratase activity
C3F34_RS17280	COG1902	pentaerythritol trinitrate reductase activity
C3F34_RS17280	COG0446	pyridine nucleotide-disulphide oxidoreductase
C3F34_RS17295	COG0583	DNA-binding transcription factor activity
C3F34_RS17300	COG4948	Mandelate Racemase Muconate Lactonizing
C3F34_RS17305	COG4829	muconolactone delta-isomerase
C3F34_RS17315	COG4638	Rieske (2fe-2S)
C3F34_RS17320	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
C3F34_RS17325	COG0543	2 iron, 2 sulfur cluster binding
C3F34_RS17325	COG0633	Ferredoxin
C3F34_RS17330	COG1028	Short-chain dehydrogenase reductase Sdr
C3F34_RS17335	COG3135	benzoate transporter
C3F34_RS17340	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
C3F34_RS17345	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
C3F34_RS17350	COG0183	Belongs to the thiolase family
C3F34_RS17355	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
C3F34_RS17365	COG1804	L-carnitine dehydratase bile acid-inducible protein F
C3F34_RS17370	COG1960	acyl-CoA dehydrogenase activity
C3F34_RS17375	COG0583	DNA-binding transcription factor activity
C3F34_RS17380	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
C3F34_RS17405	COG0702	epimerase
C3F34_RS17430	COG1011	Hydrolase
C3F34_RS17435	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
C3F34_RS17445	COG2137	regulation of response to DNA damage stimulus
C3F34_RS17460	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
C3F34_RS17495	COG0575	Belongs to the CDS family
C3F34_RS17500	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
C3F34_RS17520	COG3852	Histidine kinase
C3F34_RS17535	COG0583	DNA-binding transcription factor activity
C3F34_RS17540	COG0024	Methionine aminopeptidase
C3F34_RS17570	COG1253	flavin adenine dinucleotide binding
C3F34_RS17590	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
C3F34_RS17595	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
C3F34_RS17605	COG2431	L-lysine efflux transmembrane transporter activity
C3F34_RS17685	COG1309	transcriptional regulator
C3F34_RS17690	COG0084	hydrolase, TatD family'
C3F34_RS17710	COG1663	tetraacyldisaccharide 4'-kinase activity
C3F34_RS17715	COG1132	(ABC) transporter
C3F34_RS17725	COG0811	peptide transport
C3F34_RS17730	COG1475	DNA binding
C3F34_RS17735	COG1192	Involved in chromosome partitioning
C3F34_RS17740	COG0357	Ribosomal RNA small subunit methyltransferase G
C3F34_RS17745	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
C3F34_RS17750	COG3178	'Phosphotransferase
C3F34_RS17765	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
C3F34_RS17770	COG1923	regulation of RNA biosynthetic process
C3F34_RS17780	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
C3F34_RS17785	COG0802	atpase or kinase
C3F34_RS17810	COG2707	UPF0756 membrane protein
C3F34_RS17815	COG0583	DNA-binding transcription factor activity
C3F34_RS17820	COG2814	Major facilitator Superfamily
C3F34_RS17825	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
C3F34_RS17830	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
C3F34_RS17840	COG1454	alcohol dehydrogenase
C3F34_RS17860	COG0697	spore germination
C3F34_RS17885	COG0519	Catalyzes the synthesis of GMP from XMP
C3F34_RS17885	COG0518	GMP synthase (glutamine-hydrolyzing) activity
C3F34_RS17895	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
C3F34_RS17930	COG2815	serine threonine protein kinase
C3F34_RS17930	COG0515	serine threonine protein kinase
C3F34_RS17950	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
C3F34_RS17960	COG1610	YqeY-like protein
C3F34_RS17975	COG4783	chaperone-mediated protein folding
C3F34_RS18030	COG0778	Nitroreductase
C3F34_RS18040	COG0513	Belongs to the DEAD box helicase family
C3F34_RS18060	COG2363	Small membrane protein
C3F34_RS18080	COG0625	glutathione transferase activity
C3F34_RS18090	COG0220	tRNA (guanine-N7-)-methyltransferase activity
C3F34_RS18110	COG4772	TonB-dependent receptor
C3F34_RS18115	COG4993	Dehydrogenase
C3F34_RS18120	COG3659	wide pore channel activity
C3F34_RS18125	COG3420	alginic acid biosynthetic process
C3F34_RS18130	COG0710	3-dehydroquinate dehydratase activity
C3F34_RS18135	COG3485	protocatechuate 3,4-dioxygenase
C3F34_RS18140	COG3485	protocatechuate 3,4-dioxygenase
C3F34_RS18145	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
C3F34_RS18150	COG2271	Major facilitator Superfamily
C3F34_RS18155	COG0596	Alpha beta hydrolase
C3F34_RS18160	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
C3F34_RS18165	COG0183	Belongs to the thiolase family
C3F34_RS18170	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
C3F34_RS18175	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
C3F34_RS18190	COG2076	Multidrug Resistance protein
C3F34_RS18285	COG3173	Aminoglycoside phosphotransferase
C3F34_RS18290	COG0488	(ABC) transporter
C3F34_RS18310	COG3077	Addiction module antitoxin, RelB DinJ family
C3F34_RS18470	COG2184	nucleotidyltransferase activity
C3F34_RS18490	COG1785	Belongs to the alkaline phosphatase family
C3F34_RS18495	COG1785	Belongs to the alkaline phosphatase family
C3F34_RS18545	COG3038	cytochrome b561
C3F34_RS18560	COG0671	phosphoesterase, PA-phosphatase related
C3F34_RS18600	COG0745	RESPONSE REGULATOR receiver
C3F34_RS18625	COG4683	PFAM Phage derived protein Gp49-like (DUF891)
C3F34_RS18720	COG1373	ATPase (AAA superfamily
C3F34_RS18770	COG0589	response to stress
C3F34_RS18775	COG0640	Transcriptional regulator
C3F34_RS18785	COG0798	PFAM Bile acid sodium symporter
C3F34_RS18790	COG0431	NADPH-dependent FMN reductase
C3F34_RS18795	COG0492	ferredoxin-NADP+ reductase activity
C3F34_RS18810	COG0659	secondary active sulfate transmembrane transporter activity
C3F34_RS18820	COG1981	membrane
C3F34_RS18840	COG1136	(ABC) transporter
C3F34_RS18865	COG1294	oxidase, subunit
C3F34_RS18870	COG1271	oxidase subunit
C3F34_RS18955	COG0640	Transcriptional regulator
C3F34_RS19025	COG2801	Transposase and inactivated derivatives
C3F34_RS19050	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
C3F34_RS19055	COG1309	transcriptional regulator
C3F34_RS19060	COG1012	belongs to the aldehyde dehydrogenase family
C3F34_RS19095	COG1475	DNA binding
C3F34_RS19100	COG1192	Involved in chromosome partitioning
C3F34_RS19175	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
C3F34_RS19200	COG2369	cell adhesion
C3F34_RS19205	COG0582	viral genome integration into host DNA
C3F34_RS19230	COG0830	nickel cation binding
C3F34_RS19245	COG0829	nickel cation binding
C3F34_RS19250	COG0831	urea catabolic process
C3F34_RS19265	COG0804	urea catabolic process
C3F34_RS19280	COG2351	hydroxyisourate hydrolase activity
C3F34_RS19285	COG2233	PERMEase
C3F34_RS19300	COG4266	Belongs to the allantoicase family
C3F34_RS19305	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
C3F34_RS19310	COG0583	DNA-binding transcription factor activity
C3F34_RS19325	COG2233	PERMEase
C3F34_RS19395	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
C3F34_RS19410	COG1979	alcohol dehydrogenase
C3F34_RS19420	COG1902	pentaerythritol trinitrate reductase activity
C3F34_RS19430	COG1309	transcriptional regulator
C3F34_RS19435	COG2130	NADP-dependent
C3F34_RS19470	COG1373	ATPase (AAA superfamily
C3F34_RS19510	COG0471	metal ion transport
C3F34_RS19550	COG2217	Heavy metal translocating P-type atpase
C3F34_RS19555	COG3174	membrane
C3F34_RS19560	COG2205	protein histidine kinase activity
C3F34_RS19575	COG2132	Multicopper oxidase
C3F34_RS19605	COG2072	flavoprotein involved in K transport
C3F34_RS19655	COG0484	heat shock protein binding
C3F34_RS19690	COG0488	(ABC) transporter
C3F34_RS19695	COG3173	Aminoglycoside phosphotransferase
C3F34_RS19725	COG0659	secondary active sulfate transmembrane transporter activity
C3F34_RS19745	COG3657	addiction module killer protein
C3F34_RS19750	COG3636	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
C3F34_RS19770	COG0488	(ABC) transporter
C3F34_RS19780	COG3173	Aminoglycoside phosphotransferase
C3F34_RS19840	COG0589	response to stress
C3F34_RS19890	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
C3F34_RS20015	COG5377	YqaJ viral recombinase family
C3F34_RS20085	COG1484	DNA-dependent DNA replication