locus-tag	class	description
CQZ96_RS00025	COG4122	O-methyltransferase activity
CQZ96_RS00040	COG0573	inorganic phosphate transmembrane transporter activity
CQZ96_RS00050	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
CQZ96_RS00055	COG1301	dicarboxylic acid transport
CQZ96_RS00060	COG0616	signal peptide processing
CQZ96_RS00065	COG1960	acyl-CoA dehydrogenase activity
CQZ96_RS00070	COG0693	protein deglycase activity
CQZ96_RS00080	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
CQZ96_RS00100	COG0430	RNA-3'-phosphate cyclase activity
CQZ96_RS00125	COG1690	Belongs to the RtcB family
CQZ96_RS00140	COG1234	tRNA 3'-trailer cleavage
CQZ96_RS00145	COG4650	regulator
CQZ96_RS00155	COG3022	response to hydroperoxide
CQZ96_RS00265	COG2011	ABC-type metal ion transport system permease component
CQZ96_RS00270	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CQZ96_RS00275	COG1464	Belongs to the NlpA lipoprotein family
CQZ96_RS00285	COG0151	Belongs to the GarS family
CQZ96_RS00290	COG0138	bifunctional purine biosynthesis protein purh
CQZ96_RS00295	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
CQZ96_RS00340	COG2308	Evidence 4 Homologs of previously reported genes of
CQZ96_RS00350	COG1305	Transglutaminase-like
CQZ96_RS00365	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CQZ96_RS00375	COG0305	Participates in initiation and elongation during chromosome replication
CQZ96_RS00385	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
CQZ96_RS00390	COG0360	Binds together with S18 to 16S ribosomal RNA
CQZ96_RS00415	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
CQZ96_RS00420	COG1845	cytochrome c oxidase, subunit III
CQZ96_RS00425	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
CQZ96_RS00430	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
CQZ96_RS00465	COG4682	membrane
CQZ96_RS00470	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CQZ96_RS00485	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
CQZ96_RS00490	COG2890	protein-(glutamine-N5) methyltransferase activity
CQZ96_RS00495	COG3781	membrane
CQZ96_RS00500	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CQZ96_RS00505	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CQZ96_RS00525	COG1960	acyl-CoA dehydrogenase activity
CQZ96_RS00530	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CQZ96_RS00540	COG4585	Histidine kinase
CQZ96_RS00550	COG0659	secondary active sulfate transmembrane transporter activity
CQZ96_RS00555	COG0625	glutathione transferase activity
CQZ96_RS00560	COG2249	NAD(P)H dehydrogenase (quinone) activity
CQZ96_RS00565	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
CQZ96_RS00605	COG2363	Small membrane protein
CQZ96_RS00620	COG1278	Cold shock
CQZ96_RS00625	COG0513	Belongs to the DEAD box helicase family
CQZ96_RS00635	COG0778	Nitroreductase
CQZ96_RS00660	COG0167	dihydroorotate dehydrogenase activity
CQZ96_RS00665	COG1286	toxin biosynthetic process
CQZ96_RS00690	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
CQZ96_RS00690	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
CQZ96_RS00695	COG1254	Belongs to the acylphosphatase family
CQZ96_RS00720	COG1280	lysine exporter protein (LysE YggA)
CQZ96_RS00735	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
CQZ96_RS00740	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
CQZ96_RS00800	COG4978	Transcriptional regulator
CQZ96_RS00800	COG0789	Transcriptional regulator
CQZ96_RS00805	COG0477	Major facilitator Superfamily
CQZ96_RS00825	COG3042	response to heat
CQZ96_RS00830	COG0519	Catalyzes the synthesis of GMP from XMP
CQZ96_RS00830	COG0518	GMP synthase (glutamine-hydrolyzing) activity
CQZ96_RS00835	COG1309	transcriptional regulator
CQZ96_RS00855	COG0583	DNA-binding transcription factor activity
CQZ96_RS00875	COG3284	Transcriptional regulator
CQZ96_RS00890	COG1454	alcohol dehydrogenase
CQZ96_RS00900	COG0183	Belongs to the thiolase family
CQZ96_RS00930	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
CQZ96_RS00940	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
CQZ96_RS00950	COG0824	Thioesterase
CQZ96_RS00960	COG1454	alcohol dehydrogenase
CQZ96_RS00965	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CQZ96_RS01030	COG0537	adenosine 5'-monophosphoramidase activity
CQZ96_RS01060	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
CQZ96_RS01080	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CQZ96_RS01090	COG0133	tryptophan synthase activity
CQZ96_RS01095	COG0517	IMP dehydrogenase activity
CQZ96_RS01095	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
CQZ96_RS01125	COG0612	Peptidase, M16
CQZ96_RS01130	COG0552	protein localization to endoplasmic reticulum
CQZ96_RS01140	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
CQZ96_RS01160	COG1253	flavin adenine dinucleotide binding
CQZ96_RS01185	COG0024	Methionine aminopeptidase
CQZ96_RS01190	COG3135	benzoate transporter
CQZ96_RS01200	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
CQZ96_RS01205	COG0583	DNA-binding transcription factor activity
CQZ96_RS01220	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
CQZ96_RS01230	COG0659	secondary active sulfate transmembrane transporter activity
CQZ96_RS01290	COG4890	Cyd operon protein YbgT
CQZ96_RS01295	COG1294	oxidase, subunit
CQZ96_RS01310	COG2249	NAD(P)H dehydrogenase (quinone) activity
CQZ96_RS01325	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CQZ96_RS01345	COG1132	(ABC) transporter
CQZ96_RS01350	COG4683	PFAM Phage derived protein Gp49-like (DUF891)
CQZ96_RS01375	COG4773	Receptor
CQZ96_RS01380	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CQZ96_RS01400	COG3753	Protein conserved in bacteria
CQZ96_RS01410	COG2204	response regulator
CQZ96_RS01415	COG3852	Histidine kinase
CQZ96_RS01430	COG0233	cytoplasmic translational termination
CQZ96_RS01435	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
CQZ96_RS01440	COG0575	Belongs to the CDS family
CQZ96_RS01455	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CQZ96_RS01465	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CQZ96_RS01475	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CQZ96_RS01490	COG2137	regulation of response to DNA damage stimulus
CQZ96_RS01495	COG0318	PFAM AMP-dependent synthetase and ligase
CQZ96_RS01500	COG4221	oxidoreductase activity
CQZ96_RS01505	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
CQZ96_RS01510	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
CQZ96_RS01515	COG1011	Hydrolase
CQZ96_RS01550	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
CQZ96_RS01555	COG0730	response to heat
CQZ96_RS01575	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
CQZ96_RS01585	COG3706	GGDEF domain
CQZ96_RS01595	COG0439	Biotin carboxylase
CQZ96_RS01600	COG0511	ligase activity, forming carbon-carbon bonds
CQZ96_RS01610	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CQZ96_RS01640	COG1846	Transcriptional regulator
CQZ96_RS01650	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CQZ96_RS01670	COG0308	aminopeptidase N
CQZ96_RS01685	COG1570	exodeoxyribonuclease VII activity
CQZ96_RS01765	COG0506	proline dehydrogenase activity
CQZ96_RS01765	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
CQZ96_RS01765	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
CQZ96_RS01775	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CQZ96_RS01780	COG1027	Aspartate ammonia-lyase
CQZ96_RS01790	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
CQZ96_RS01810	COG0477	Major facilitator Superfamily
CQZ96_RS01820	COG3135	benzoate transporter
CQZ96_RS01825	COG1028	Short-chain dehydrogenase reductase Sdr
CQZ96_RS01830	COG0633	Ferredoxin
CQZ96_RS01830	COG0543	2 iron, 2 sulfur cluster binding
CQZ96_RS01835	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
CQZ96_RS01840	COG4638	Rieske (2fe-2S)
CQZ96_RS01850	COG0583	DNA-binding transcription factor activity
CQZ96_RS01855	COG2814	Major facilitator Superfamily
CQZ96_RS01865	COG2267	carboxylic ester hydrolase activity
CQZ96_RS01875	COG0446	pyridine nucleotide-disulphide oxidoreductase
CQZ96_RS01875	COG1902	pentaerythritol trinitrate reductase activity
CQZ96_RS01895	COG1027	Aspartate ammonia-lyase
CQZ96_RS01910	COG2877	3-deoxy-8-phosphooctulonate synthase activity
CQZ96_RS01920	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
CQZ96_RS01930	COG0772	Belongs to the SEDS family
CQZ96_RS01935	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CQZ96_RS01965	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CQZ96_RS01990	COG0667	Aldo Keto reductase
CQZ96_RS02020	COG1309	transcriptional regulator
CQZ96_RS02025	COG2226	methyltransferase
CQZ96_RS02025	COG0596	Alpha beta hydrolase
CQZ96_RS02025	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CQZ96_RS02030	COG2937	Belongs to the GPAT DAPAT family
CQZ96_RS02035	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CQZ96_RS02050	COG4589	Belongs to the CDS family
CQZ96_RS02065	COG2453	phosphatase
CQZ96_RS02065	COG0671	phosphoesterase, PA-phosphatase related
CQZ96_RS02070	COG2267	carboxylic ester hydrolase activity
CQZ96_RS02075	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CQZ96_RS02085	COG1733	regulation of RNA biosynthetic process
CQZ96_RS02105	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
CQZ96_RS02115	COG2119	membrane
CQZ96_RS02120	COG2194	sulfuric ester hydrolase activity
CQZ96_RS02150	COG2223	nitrite transmembrane transporter activity
CQZ96_RS02170	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CQZ96_RS02185	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
CQZ96_RS02190	COG0588	phosphoglycerate mutase activity
CQZ96_RS02205	COG3122	Protein conserved in bacteria
CQZ96_RS02225	COG0640	Transcriptional regulator
CQZ96_RS02240	COG2391	methyltransferase activity
CQZ96_RS02260	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
CQZ96_RS02315	COG0509	glycine decarboxylation via glycine cleavage system
CQZ96_RS02335	COG1960	acyl-CoA dehydrogenase activity
CQZ96_RS02340	COG1960	acyl-CoA dehydrogenase activity
CQZ96_RS02390	COG0589	response to stress
CQZ96_RS02400	COG0830	nickel cation binding
CQZ96_RS02430	COG0804	urea catabolic process
CQZ96_RS02465	COG2351	hydroxyisourate hydrolase activity
CQZ96_RS02475	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
CQZ96_RS02480	COG4266	Belongs to the allantoicase family
CQZ96_RS02485	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CQZ96_RS02490	COG0583	DNA-binding transcription factor activity
CQZ96_RS02500	COG1012	belongs to the aldehyde dehydrogenase family
CQZ96_RS02525	COG2072	flavoprotein involved in K transport
CQZ96_RS02540	COG0697	spore germination
CQZ96_RS02545	COG4245	von Willebrand factor, type A
CQZ96_RS02580	COG1358	cellular component organization or biogenesis
CQZ96_RS02620	COG2304	oxidoreductase activity
CQZ96_RS02635	COG1944	ATP diphosphatase activity
CQZ96_RS02640	COG0583	DNA-binding transcription factor activity
CQZ96_RS02655	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CQZ96_RS02660	COG1960	acyl-CoA dehydrogenase activity
CQZ96_RS02665	COG1024	Enoyl-CoA hydratase
CQZ96_RS02690	COG1309	transcriptional regulator
CQZ96_RS02695	COG1846	Transcriptional regulator
CQZ96_RS02715	COG1262	PFAM Formylglycine-generating sulfatase enzyme
CQZ96_RS02720	COG3119	arylsulfatase activity
CQZ96_RS02735	COG2814	Major facilitator Superfamily
CQZ96_RS02740	COG0583	DNA-binding transcription factor activity
CQZ96_RS02745	COG1522	sequence-specific DNA binding
CQZ96_RS02750	COG2197	response regulator
CQZ96_RS02760	COG1773	rubredoxin
CQZ96_RS02775	COG0183	Belongs to the thiolase family
CQZ96_RS02800	COG2197	response regulator
CQZ96_RS02810	COG1960	acyl-CoA dehydrogenase activity
CQZ96_RS02815	COG1024	Enoyl-CoA hydratase
CQZ96_RS02820	COG0626	cystathionine gamma-synthase activity
CQZ96_RS02830	COG0583	DNA-binding transcription factor activity
CQZ96_RS02835	COG1028	Short-chain dehydrogenase reductase Sdr
CQZ96_RS02845	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CQZ96_RS02850	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CQZ96_RS02875	COG1309	transcriptional regulator
CQZ96_RS02885	COG0583	DNA-binding transcription factor activity
CQZ96_RS02890	COG1380	Effector of murein hydrolase LrgA
CQZ96_RS02895	COG1346	cytolysis
CQZ96_RS02900	COG2814	Major facilitator Superfamily
CQZ96_RS02920	COG3135	benzoate transporter
CQZ96_RS02925	COG0596	Alpha beta hydrolase
CQZ96_RS02935	COG0488	(ABC) transporter
CQZ96_RS02965	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CQZ96_RS02975	COG0436	Aminotransferase
CQZ96_RS02980	COG0697	spore germination
CQZ96_RS02995	COG1028	Short-chain dehydrogenase reductase Sdr
CQZ96_RS03000	COG0583	DNA-binding transcription factor activity
CQZ96_RS03010	COG2814	Major facilitator Superfamily
CQZ96_RS03060	COG0583	DNA-binding transcription factor activity
CQZ96_RS03080	COG1294	oxidase, subunit
CQZ96_RS03085	COG1271	oxidase subunit
CQZ96_RS03155	COG0786	glutamate:sodium symporter activity
CQZ96_RS03160	COG0583	DNA-binding transcription factor activity
CQZ96_RS03165	COG2910	NAD(P)H-binding
CQZ96_RS03345	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
CQZ96_RS03375	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CQZ96_RS03380	COG2207	Transcriptional regulator
CQZ96_RS03390	COG0776	regulation of translation
CQZ96_RS03405	COG1959	2 iron, 2 sulfur cluster binding
CQZ96_RS03415	COG0822	iron-sulfur transferase activity
CQZ96_RS03420	COG0316	Belongs to the HesB IscA family
CQZ96_RS03450	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
CQZ96_RS03475	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
CQZ96_RS03480	COG0702	epimerase
CQZ96_RS03520	COG3196	Protein conserved in bacteria
CQZ96_RS03550	COG0126	phosphoglycerate kinase activity
CQZ96_RS03560	COG0424	maF-like protein
CQZ96_RS03570	COG2850	peptidyl-arginine hydroxylation
CQZ96_RS03585	COG0069	glutamate synthase activity
CQZ96_RS03600	COG0372	Belongs to the citrate synthase family
CQZ96_RS03635	COG2814	Major facilitator Superfamily
CQZ96_RS03640	COG1960	acyl-CoA dehydrogenase activity
CQZ96_RS03645	COG0583	DNA-binding transcription factor activity
CQZ96_RS03655	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CQZ96_RS03660	COG0583	DNA-binding transcription factor activity
CQZ96_RS03690	COG0542	response to heat
CQZ96_RS03695	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
CQZ96_RS03710	COG3706	GGDEF domain
CQZ96_RS03745	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
CQZ96_RS03750	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
CQZ96_RS03765	COG0569	domain protein
CQZ96_RS03770	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
CQZ96_RS03775	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
CQZ96_RS03790	COG2431	L-lysine efflux transmembrane transporter activity
CQZ96_RS03795	COG0284	orotidine-5'-phosphate decarboxylase activity
CQZ96_RS03815	COG3539	Fimbrial protein
CQZ96_RS03820	COG3121	Chaperone
CQZ96_RS03850	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
CQZ96_RS03860	COG0590	tRNA wobble adenosine to inosine editing
CQZ96_RS03870	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
CQZ96_RS03880	COG3156	type II secretion system protein K
CQZ96_RS03905	COG0084	hydrolase, TatD family'
CQZ96_RS03920	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
CQZ96_RS03925	COG1663	tetraacyldisaccharide 4'-kinase activity
CQZ96_RS03930	COG1132	(ABC) transporter
CQZ96_RS03940	COG0811	peptide transport
CQZ96_RS03945	COG1475	DNA binding
CQZ96_RS03950	COG1192	Involved in chromosome partitioning
CQZ96_RS03960	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
CQZ96_RS03965	COG3178	'Phosphotransferase
CQZ96_RS03975	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CQZ96_RS03980	COG1923	regulation of RNA biosynthetic process
CQZ96_RS03995	COG0802	atpase or kinase
CQZ96_RS04020	COG1187	pseudouridine synthase activity
CQZ96_RS04030	COG1959	2 iron, 2 sulfur cluster binding
CQZ96_RS04035	COG2707	UPF0756 membrane protein
CQZ96_RS04050	COG0786	glutamate:sodium symporter activity
CQZ96_RS04060	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CQZ96_RS04120	COG1464	Belongs to the NlpA lipoprotein family
CQZ96_RS04125	COG1464	Belongs to the NlpA lipoprotein family
CQZ96_RS04130	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CQZ96_RS04135	COG2011	ABC-type metal ion transport system permease component
CQZ96_RS04145	COG0012	GTP binding
CQZ96_RS04150	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CQZ96_RS04175	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
CQZ96_RS04195	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
CQZ96_RS04225	COG1917	Cupin 2, conserved barrel domain protein
CQZ96_RS04225	COG2207	Transcriptional regulator
CQZ96_RS04230	COG0386	Belongs to the glutathione peroxidase family
CQZ96_RS04235	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CQZ96_RS04240	COG0436	Aminotransferase
CQZ96_RS04270	COG1610	YqeY-like protein
CQZ96_RS04285	COG4783	chaperone-mediated protein folding
CQZ96_RS04290	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CQZ96_RS04305	COG0318	PFAM AMP-dependent synthetase and ligase
CQZ96_RS04315	COG0729	surface antigen
CQZ96_RS04320	COG0477	Major facilitator Superfamily
CQZ96_RS04340	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
CQZ96_RS04350	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CQZ96_RS04360	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
CQZ96_RS04375	COG0204	Acyl-transferase
CQZ96_RS04415	COG1802	Transcriptional regulator
CQZ96_RS04435	COG0693	protein deglycase activity
CQZ96_RS04450	COG1309	transcriptional regulator
CQZ96_RS04480	COG0583	DNA-binding transcription factor activity
CQZ96_RS04485	COG0220	tRNA (guanine-N7-)-methyltransferase activity
CQZ96_RS04490	COG2814	Major facilitator Superfamily
CQZ96_RS04495	COG1309	transcriptional regulator
CQZ96_RS04500	COG4521	taurine ABC transporter
CQZ96_RS04505	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CQZ96_RS04510	COG1116	anion transmembrane transporter activity
CQZ96_RS04515	COG2515	1-aminocyclopropane-1-carboxylate deaminase
CQZ96_RS04545	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
CQZ96_RS04555	COG0583	DNA-binding transcription factor activity
CQZ96_RS04565	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CQZ96_RS04595	COG0540	Belongs to the ATCase OTCase family
CQZ96_RS04625	COG0542	response to heat
CQZ96_RS04635	COG1045	serine acetyltransferase
CQZ96_RS04645	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CQZ96_RS04650	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
CQZ96_RS04680	COG1765	OsmC-like protein
CQZ96_RS04690	COG0667	Aldo Keto reductase
CQZ96_RS04710	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
CQZ96_RS04725	COG1335	isochorismatase
CQZ96_RS04730	COG1522	sequence-specific DNA binding
CQZ96_RS04735	COG1859	Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase
CQZ96_RS04760	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
CQZ96_RS04785	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CQZ96_RS05050	COG0527	aspartate kinase activity
CQZ96_RS05060	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
CQZ96_RS05070	COG3038	cytochrome b561
CQZ96_RS05080	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
CQZ96_RS05085	COG2252	PERMEase
CQZ96_RS05100	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CQZ96_RS05105	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CQZ96_RS05120	COG4771	TonB-dependent receptor
CQZ96_RS05180	COG5487	UPF0391 membrane protein
CQZ96_RS05220	COG0714	Associated with various cellular activities
CQZ96_RS05230	COG2879	small protein
CQZ96_RS05235	COG1966	Carbon starvation protein
CQZ96_RS05240	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
CQZ96_RS05245	COG1509	lysine 2,3-aminomutase activity
CQZ96_RS05280	COG1067	ATP-dependent peptidase activity
CQZ96_RS05285	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
CQZ96_RS05290	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CQZ96_RS05320	COG1686	Belongs to the peptidase S11 family
CQZ96_RS05325	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
CQZ96_RS05350	COG2915	High frequency lysogenization protein hflD homolog
CQZ96_RS05365	COG1733	regulation of RNA biosynthetic process
CQZ96_RS05370	COG0702	epimerase
CQZ96_RS05400	COG2962	Rard protein
CQZ96_RS05410	COG0556	nucleotide-excision repair
CQZ96_RS05435	COG0436	Aminotransferase
CQZ96_RS05475	COG1595	DNA-templated transcription, initiation
CQZ96_RS05485	COG2832	Protein of unknown function (DUF454)
CQZ96_RS05505	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CQZ96_RS05510	COG0745	RESPONSE REGULATOR receiver
CQZ96_RS05515	COG5002	protein histidine kinase activity
CQZ96_RS05550	COG2871	sodium ion transport
CQZ96_RS05570	COG1012	belongs to the aldehyde dehydrogenase family
CQZ96_RS05575	COG4638	Rieske (2fe-2S)
CQZ96_RS05590	COG0473	3-isopropylmalate dehydrogenase activity
CQZ96_RS05595	COG0583	DNA-binding transcription factor activity
CQZ96_RS05655	COG3501	Rhs element vgr protein
CQZ96_RS05680	COG4264	IucA IucC family
CQZ96_RS05685	COG4264	IucA IucC family
CQZ96_RS05690	COG2814	Major facilitator Superfamily
CQZ96_RS05700	COG4264	IucA IucC family
CQZ96_RS05715	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
CQZ96_RS05725	COG0583	DNA-binding transcription factor activity
CQZ96_RS05730	COG2610	gluconate transmembrane transporter activity
CQZ96_RS05735	COG1028	Short-chain dehydrogenase reductase Sdr
CQZ96_RS05740	COG1250	3-hydroxyacyl-CoA dehydrogenase
CQZ96_RS05745	COG1024	Enoyl-CoA hydratase
CQZ96_RS05750	COG1960	acyl-CoA dehydrogenase activity
CQZ96_RS05760	COG2814	Major facilitator Superfamily
CQZ96_RS05770	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
CQZ96_RS05775	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
CQZ96_RS05780	COG2814	Major facilitator Superfamily
CQZ96_RS05785	COG1960	acyl-CoA dehydrogenase activity
CQZ96_RS05790	COG1024	Enoyl-CoA hydratase
CQZ96_RS05795	COG1028	Short-chain dehydrogenase reductase Sdr
CQZ96_RS05800	COG1250	3-hydroxyacyl-CoA dehydrogenase
CQZ96_RS05805	COG0183	Belongs to the thiolase family
CQZ96_RS05815	COG2814	Major facilitator Superfamily
CQZ96_RS05830	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CQZ96_RS05835	COG1960	acyl-CoA dehydrogenase activity
CQZ96_RS05840	COG2814	Major facilitator Superfamily
CQZ96_RS05845	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
CQZ96_RS05845	COG0644	oxidoreductase
CQZ96_RS05865	COG1262	PFAM Formylglycine-generating sulfatase enzyme
CQZ96_RS05875	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
CQZ96_RS05900	COG1063	alcohol dehydrogenase
CQZ96_RS05915	COG1172	Belongs to the binding-protein-dependent transport system permease family
CQZ96_RS05920	COG1129	ABC transporter
CQZ96_RS05935	COG1737	Transcriptional regulator
CQZ96_RS05940	COG0546	phosphoglycolate phosphatase activity
CQZ96_RS05950	COG1012	belongs to the aldehyde dehydrogenase family
CQZ96_RS05960	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CQZ96_RS05965	COG1028	Short-chain dehydrogenase reductase Sdr
CQZ96_RS05975	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
CQZ96_RS06020	COG1346	cytolysis
CQZ96_RS06025	COG1380	Effector of murein hydrolase LrgA
CQZ96_RS06030	COG1271	oxidase subunit
CQZ96_RS06035	COG1294	oxidase, subunit
CQZ96_RS06050	COG3485	protocatechuate 3,4-dioxygenase
CQZ96_RS06055	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
CQZ96_RS06060	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
CQZ96_RS06065	COG0583	DNA-binding transcription factor activity
CQZ96_RS06070	COG4948	Mandelate Racemase Muconate Lactonizing
CQZ96_RS06075	COG4829	muconolactone delta-isomerase
CQZ96_RS06080	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
CQZ96_RS06085	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
CQZ96_RS06090	COG0183	Belongs to the thiolase family
CQZ96_RS06095	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CQZ96_RS06105	COG1012	belongs to the aldehyde dehydrogenase family
CQZ96_RS06115	COG3733	amine oxidase
CQZ96_RS06125	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CQZ96_RS06135	COG1028	Short-chain dehydrogenase reductase Sdr
CQZ96_RS06145	COG4638	Rieske (2fe-2S)
CQZ96_RS06160	COG0154	amidase activity
CQZ96_RS06170	COG1250	3-hydroxyacyl-CoA dehydrogenase
CQZ96_RS06185	COG2814	Major facilitator Superfamily
CQZ96_RS06195	COG4638	Rieske (2fe-2S)
CQZ96_RS06200	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
CQZ96_RS06205	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CQZ96_RS06205	COG0543	2 iron, 2 sulfur cluster binding
CQZ96_RS06220	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CQZ96_RS06260	COG1234	tRNA 3'-trailer cleavage
CQZ96_RS06275	COG1522	sequence-specific DNA binding
CQZ96_RS06285	COG4149	molybdate abc transporter
CQZ96_RS06290	COG0725	ABC transporter, periplasmic molybdate-binding protein
CQZ96_RS06295	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
CQZ96_RS06300	COG0243	molybdopterin cofactor binding
CQZ96_RS06320	COG0303	'Molybdopterin
CQZ96_RS06325	COG0315	cyclic pyranopterin monophosphate synthase activity
CQZ96_RS06325	COG0521	Mo-molybdopterin cofactor biosynthetic process
CQZ96_RS06330	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
CQZ96_RS06345	COG3121	Chaperone
CQZ96_RS06355	COG3188	usher protein
CQZ96_RS06385	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
CQZ96_RS06395	COG0076	glutamate decarboxylase activity
CQZ96_RS06400	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
CQZ96_RS06410	COG4772	TonB-dependent receptor
CQZ96_RS06455	COG1022	Amp-dependent synthetase and ligase
CQZ96_RS06495	COG0789	Transcriptional regulator
CQZ96_RS06500	COG0798	PFAM Bile acid sodium symporter
CQZ96_RS06505	COG0640	Transcriptional regulator
CQZ96_RS06520	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
CQZ96_RS06530	COG0583	DNA-binding transcription factor activity
CQZ96_RS06535	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
CQZ96_RS06540	COG3634	alkyl hydroperoxide reductase activity
CQZ96_RS06580	COG0628	permease
CQZ96_RS06590	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
CQZ96_RS06615	COG0658	competence protein
CQZ96_RS06615	COG2333	competence protein COMEC
CQZ96_RS06620	COG1136	(ABC) transporter
CQZ96_RS06635	COG1280	lysine exporter protein (LysE YggA)
CQZ96_RS06640	COG0300	oxidoreductase activity
CQZ96_RS06645	COG2072	flavoprotein involved in K transport
CQZ96_RS06655	COG3706	GGDEF domain
CQZ96_RS06670	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
CQZ96_RS06675	COG0010	Belongs to the arginase family
CQZ96_RS06685	COG1113	amino acid transport
CQZ96_RS06705	COG2188	Transcriptional regulator
CQZ96_RS06710	COG2831	hemolysin activation secretion protein
CQZ96_RS06715	COG3210	domain, Protein
CQZ96_RS06745	COG1643	Atp-dependent helicase
CQZ96_RS06800	COG2070	2-Nitropropane dioxygenase
CQZ96_RS06805	COG2318	DinB family
CQZ96_RS06835	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
CQZ96_RS06845	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
CQZ96_RS06855	COG1301	dicarboxylic acid transport
CQZ96_RS06860	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
CQZ96_RS06870	COG3139	Protein of unknown function (DUF1315)
CQZ96_RS06875	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
CQZ96_RS06880	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CQZ96_RS06890	COG0494	nUDIX hydrolase
CQZ96_RS06900	COG0642	Histidine kinase
CQZ96_RS06905	COG0745	RESPONSE REGULATOR receiver
CQZ96_RS06915	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
CQZ96_RS06955	COG0352	thiamine-phosphate diphosphorylase activity
CQZ96_RS06975	COG1720	tRNA m6t6A37 methyltransferase activity
CQZ96_RS06985	COG0612	Peptidase, M16
CQZ96_RS07005	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CQZ96_RS07015	COG2233	PERMEase
CQZ96_RS07030	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
CQZ96_RS07045	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
CQZ96_RS07150	COG1476	TRANSCRIPTIONal
CQZ96_RS07220	COG1131	(ABC) transporter
CQZ96_RS07225	COG0842	Transport permease protein
CQZ96_RS07240	COG0772	Belongs to the SEDS family
CQZ96_RS07245	COG2951	lytic endotransglycosylase activity
CQZ96_RS07295	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
CQZ96_RS07300	COG0052	Belongs to the universal ribosomal protein uS2 family
CQZ96_RS07325	COG4172	Belongs to the ABC transporter superfamily
CQZ96_RS07330	COG4239	(ABC) transporter, permease
CQZ96_RS07335	COG4174	ABC transporter (Permease)
CQZ96_RS07340	COG4166	transmembrane transport
CQZ96_RS07345	COG0741	lytic transglycosylase activity
CQZ96_RS07345	COG1388	LysM domain
CQZ96_RS07350	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CQZ96_RS07395	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CQZ96_RS07400	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CQZ96_RS07410	COG0006	proline dipeptidase activity
CQZ96_RS07450	COG0583	DNA-binding transcription factor activity
CQZ96_RS07455	COG1073	alpha beta
CQZ96_RS07475	COG0745	RESPONSE REGULATOR receiver
CQZ96_RS07480	COG2205	protein histidine kinase activity
CQZ96_RS07490	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
CQZ96_RS07495	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
CQZ96_RS07505	COG1923	regulation of RNA biosynthetic process
CQZ96_RS07520	COG2205	protein histidine kinase activity
CQZ96_RS07535	COG2217	Heavy metal translocating P-type atpase
CQZ96_RS07540	COG0789	Transcriptional regulator
CQZ96_RS07545	COG4993	Dehydrogenase
CQZ96_RS07550	COG3659	wide pore channel activity
CQZ96_RS07555	COG3420	alginic acid biosynthetic process
CQZ96_RS07560	COG0710	3-dehydroquinate dehydratase activity
CQZ96_RS07565	COG3485	protocatechuate 3,4-dioxygenase
CQZ96_RS07570	COG3485	protocatechuate 3,4-dioxygenase
CQZ96_RS07575	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CQZ96_RS07580	COG2271	Major facilitator Superfamily
CQZ96_RS07585	COG0596	Alpha beta hydrolase
CQZ96_RS07590	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
CQZ96_RS07595	COG0183	Belongs to the thiolase family
CQZ96_RS07600	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
CQZ96_RS07605	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
CQZ96_RS07610	COG1414	Transcriptional regulator
CQZ96_RS07620	COG0315	cyclic pyranopterin monophosphate synthase activity
CQZ96_RS07620	COG0521	Mo-molybdopterin cofactor biosynthetic process
CQZ96_RS07625	COG0314	molybdopterin synthase activity
CQZ96_RS07635	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
CQZ96_RS07645	COG0243	molybdopterin cofactor binding
CQZ96_RS07650	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CQZ96_RS07655	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CQZ96_RS07660	COG2223	nitrite transmembrane transporter activity
CQZ96_RS07670	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CQZ96_RS07670	COG1116	anion transmembrane transporter activity
CQZ96_RS07685	COG3501	Rhs element vgr protein
CQZ96_RS07700	COG1028	Short-chain dehydrogenase reductase Sdr
CQZ96_RS07755	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
CQZ96_RS07765	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CQZ96_RS07770	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CQZ96_RS07805	COG3539	Fimbrial protein
CQZ96_RS07880	COG3539	Fimbrial protein
CQZ96_RS07885	COG1598	PFAM Uncharacterised protein family UPF0150
CQZ96_RS07905	COG3188	usher protein
CQZ96_RS07955	COG1309	transcriptional regulator
CQZ96_RS07970	COG0477	Major facilitator Superfamily
CQZ96_RS07980	COG2259	Doxx family
CQZ96_RS07985	COG2814	Major facilitator Superfamily
CQZ96_RS07990	COG0583	DNA-binding transcription factor activity
CQZ96_RS07995	COG3321	synthase
CQZ96_RS07995	COG1028	Short-chain dehydrogenase reductase Sdr
CQZ96_RS07995	COG0604	alcohol dehydrogenase
CQZ96_RS08010	COG1595	DNA-templated transcription, initiation
CQZ96_RS08020	COG4771	TonB-dependent receptor
CQZ96_RS08030	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
CQZ96_RS08035	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
CQZ96_RS08045	COG0037	tRNA processing
CQZ96_RS08050	COG0741	lytic transglycosylase activity
CQZ96_RS08055	COG0501	Belongs to the peptidase M48B family
CQZ96_RS08075	COG0418	dihydroorotase activity
CQZ96_RS08080	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CQZ96_RS08090	COG0833	amino acid
CQZ96_RS08100	COG0833	amino acid
CQZ96_RS08120	COG3863	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
CQZ96_RS08130	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
CQZ96_RS08155	COG0019	diaminopimelate decarboxylase activity
CQZ96_RS08165	COG1113	amino acid transport
CQZ96_RS08185	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CQZ96_RS08190	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
CQZ96_RS08195	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CQZ96_RS08220	COG2239	Acts as a magnesium transporter
CQZ96_RS08225	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CQZ96_RS08230	COG0584	glycerophosphoryl diester phosphodiesterase
CQZ96_RS08245	COG0459	protein refolding
CQZ96_RS08260	COG1597	lipid kinase activity
CQZ96_RS08265	COG1274	phosphoenolpyruvate carboxykinase (GTP) activity
CQZ96_RS08290	COG0477	Major facilitator Superfamily
CQZ96_RS08350	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
CQZ96_RS08355	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
CQZ96_RS08360	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
CQZ96_RS08390	COG0564	pseudouridine synthase activity
CQZ96_RS08400	COG0358	DNA primase activity
CQZ96_RS08450	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CQZ96_RS08455	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
CQZ96_RS08485	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
CQZ96_RS08500	COG0586	Pfam SNARE associated Golgi protein
CQZ96_RS08505	COG1280	lysine exporter protein (LysE YggA)
CQZ96_RS08525	COG2921	Belongs to the UPF0250 family
CQZ96_RS08530	COG0321	lipoyl(octanoyl) transferase activity
CQZ96_RS08545	COG0531	amino acid
CQZ96_RS08575	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
CQZ96_RS08580	COG1648	precorrin-2 dehydrogenase activity
CQZ96_RS08580	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
CQZ96_RS08585	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
CQZ96_RS08595	COG3670	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
CQZ96_RS08600	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
CQZ96_RS08610	COG0261	This protein binds to 23S rRNA in the presence of protein L20
CQZ96_RS08625	COG0671	phosphoesterase, PA-phosphatase related
CQZ96_RS08630	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CQZ96_RS08640	COG1538	Outer membrane efflux protein
CQZ96_RS08645	COG0393	Putative heavy-metal-binding
CQZ96_RS08650	COG0393	Putative heavy-metal-binding
CQZ96_RS08665	COG1028	Short-chain dehydrogenase reductase Sdr
CQZ96_RS08675	COG0525	valine-tRNA ligase activity
CQZ96_RS08685	COG2852	Protein conserved in bacteria
CQZ96_RS08725	COG0004	ammonium transporteR
CQZ96_RS08740	COG0642	Histidine kinase
CQZ96_RS08750	COG2194	sulfuric ester hydrolase activity
CQZ96_RS08755	COG2814	Major facilitator Superfamily
CQZ96_RS08765	COG1752	Esterase of the alpha-beta hydrolase superfamily
CQZ96_RS08780	COG0142	geranyltranstransferase activity
CQZ96_RS08785	COG2203	Gaf domain
CQZ96_RS08785	COG2199	diguanylate cyclase activity
CQZ96_RS08790	COG2828	Protein conserved in bacteria
CQZ96_RS08795	COG1113	amino acid transport
CQZ96_RS08805	COG0582	viral genome integration into host DNA
CQZ96_RS08840	COG3772	lysozyme
CQZ96_RS09205	COG4771	TonB-dependent receptor
CQZ96_RS09220	COG1024	Enoyl-CoA hydratase
CQZ96_RS09230	COG1309	transcriptional regulator
CQZ96_RS09265	COG1215	transferase activity, transferring glycosyl groups
CQZ96_RS09270	COG0726	polysaccharide deacetylase
CQZ96_RS09270	COG1649	PFAM Uncharacterised BCR, COG1649
CQZ96_RS09285	COG4681	YaeQ
CQZ96_RS09290	COG0523	cobalamin synthesis protein
CQZ96_RS09310	COG1607	acyl-coa hydrolase
CQZ96_RS09315	COG1752	Esterase of the alpha-beta hydrolase superfamily
CQZ96_RS09320	COG2059	Chromate
CQZ96_RS09325	COG0786	glutamate:sodium symporter activity
CQZ96_RS09340	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CQZ96_RS09380	COG0420	3'-5' exonuclease activity
CQZ96_RS09430	COG0735	belongs to the Fur family
CQZ96_RS09435	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CQZ96_RS09440	COG2914	Belongs to the UPF0125 (RnfH) family
CQZ96_RS09455	COG0121	glutamine amidotransferase
CQZ96_RS09465	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
CQZ96_RS09470	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CQZ96_RS09475	COG0756	dUTP diphosphatase activity
CQZ96_RS09485	COG2885	chlorophyll binding
CQZ96_RS09490	COG0204	Acyl-transferase
CQZ96_RS09500	COG0850	regulation of cytokinetic process
CQZ96_RS09505	COG2894	cell division
CQZ96_RS09510	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
CQZ96_RS09530	COG1253	flavin adenine dinucleotide binding
CQZ96_RS09535	COG2851	Citrate transporter
CQZ96_RS09550	COG3321	synthase
CQZ96_RS09550	COG0604	alcohol dehydrogenase
CQZ96_RS09550	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CQZ96_RS09550	COG4221	oxidoreductase activity
CQZ96_RS09570	COG0175	sulfate reduction
CQZ96_RS09585	COG0306	phosphate transporter
CQZ96_RS09590	COG5295	Hep Hag repeat protein
CQZ96_RS09600	COG3177	Filamentation induced by cAMP protein fic
CQZ96_RS09610	COG2814	Major facilitator Superfamily
CQZ96_RS09615	COG1566	PFAM secretion protein HlyD family protein
CQZ96_RS09620	COG2050	protein possibly involved in aromatic compounds catabolism
CQZ96_RS09630	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CQZ96_RS09640	COG0583	DNA-binding transcription factor activity
CQZ96_RS09655	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
CQZ96_RS09665	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CQZ96_RS09670	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
CQZ96_RS09675	COG0713	ATP synthesis coupled electron transport
CQZ96_RS09685	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CQZ96_RS09690	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
CQZ96_RS09700	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
CQZ96_RS09720	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CQZ96_RS09740	COG2205	protein histidine kinase activity
CQZ96_RS09745	COG0745	RESPONSE REGULATOR receiver
CQZ96_RS09750	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
CQZ96_RS09750	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CQZ96_RS09760	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CQZ96_RS09850	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CQZ96_RS09855	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
CQZ96_RS09865	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
CQZ96_RS09870	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
CQZ96_RS09900	COG4166	transmembrane transport
CQZ96_RS09905	COG4166	transmembrane transport
CQZ96_RS09940	COG0477	Major facilitator Superfamily
CQZ96_RS09945	COG2197	response regulator
CQZ96_RS09950	COG2824	Alkylphosphonate utilization operon protein PhnA
CQZ96_RS09980	COG1408	metallophosphoesterase
CQZ96_RS09985	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CQZ96_RS09995	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CQZ96_RS10020	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
CQZ96_RS10025	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
CQZ96_RS10035	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
CQZ96_RS10045	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
CQZ96_RS10050	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
CQZ96_RS10060	COG0625	glutathione transferase activity
CQZ96_RS10065	COG2969	positive regulation of protein catabolic process
CQZ96_RS10085	COG3447	MASE1 domain protein
CQZ96_RS10085	COG5002	protein histidine kinase activity
CQZ96_RS10085	COG5001	Diguanylate cyclase
CQZ96_RS10120	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
CQZ96_RS10125	COG0354	folic acid binding
CQZ96_RS10155	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
CQZ96_RS10170	COG1902	pentaerythritol trinitrate reductase activity
CQZ96_RS10175	COG4772	TonB-dependent receptor
CQZ96_RS10190	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CQZ96_RS10200	COG1970	mechanosensitive ion channel activity
CQZ96_RS10210	COG2233	PERMEase
CQZ96_RS10220	COG0833	amino acid
CQZ96_RS10225	COG1690	Belongs to the RtcB family
CQZ96_RS10250	COG0183	Belongs to the thiolase family
CQZ96_RS10280	COG0037	tRNA processing
CQZ96_RS10290	COG0248	Ppx GppA phosphatase
CQZ96_RS10310	COG0776	regulation of translation
CQZ96_RS10315	COG0072	phenylalanine-tRNA ligase activity
CQZ96_RS10360	COG0291	Belongs to the bacterial ribosomal protein bL35 family
CQZ96_RS10375	COG1238	metal cluster binding
CQZ96_RS10390	COG0625	glutathione transferase activity
CQZ96_RS10415	COG0277	FAD linked oxidase domain protein
CQZ96_RS10430	COG0318	PFAM AMP-dependent synthetase and ligase
CQZ96_RS10440	COG1960	acyl-CoA dehydrogenase activity
CQZ96_RS10445	COG1960	acyl-CoA dehydrogenase activity
CQZ96_RS10495	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
CQZ96_RS10540	COG0438	transferase activity, transferring glycosyl groups
CQZ96_RS10565	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
CQZ96_RS10570	COG2205	protein histidine kinase activity
CQZ96_RS10585	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
CQZ96_RS10605	COG3201	nicotinamide mononucleotide transporter
CQZ96_RS10625	COG1862	Preprotein translocase
CQZ96_RS10675	COG2814	Major facilitator Superfamily
CQZ96_RS10690	COG0668	transmembrane transport
CQZ96_RS10705	COG0583	DNA-binding transcription factor activity
CQZ96_RS10720	COG0583	DNA-binding transcription factor activity
CQZ96_RS10725	COG1028	Short-chain dehydrogenase reductase Sdr
CQZ96_RS10750	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CQZ96_RS10755	COG0583	DNA-binding transcription factor activity
CQZ96_RS10775	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
CQZ96_RS10785	COG0084	hydrolase, TatD family'
CQZ96_RS10800	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
CQZ96_RS10810	COG0793	Belongs to the peptidase S41A family
CQZ96_RS10835	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CQZ96_RS10840	COG0857	belongs to the CobB CobQ family
CQZ96_RS10840	COG0280	phosphate acetyltransferase
CQZ96_RS10885	COG0740	serine-type endopeptidase activity
CQZ96_RS10895	COG4774	siderophore transport
CQZ96_RS10900	COG4774	siderophore transport
CQZ96_RS10905	COG3128	pkhd-type hydroxylase
CQZ96_RS10915	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CQZ96_RS10925	COG2813	Specifically methylates the guanine in position
CQZ96_RS10925	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CQZ96_RS10945	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
CQZ96_RS10960	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
CQZ96_RS11000	COG3878	Protein conserved in bacteria
CQZ96_RS11005	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
CQZ96_RS11065	COG1183	phosphatidylcholine synthase activity
CQZ96_RS11070	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
CQZ96_RS11090	COG0039	L-malate dehydrogenase activity
CQZ96_RS11100	COG0741	lytic transglycosylase activity
CQZ96_RS11100	COG0739	heme binding
CQZ96_RS11100	COG1196	nuclear chromosome segregation
CQZ96_RS11105	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
CQZ96_RS11110	COG1702	phosphate starvation-inducible protein PhoH
CQZ96_RS11120	COG0613	PHP domain protein
CQZ96_RS11130	COG2350	Protein conserved in bacteria
CQZ96_RS11145	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CQZ96_RS11150	COG1666	GTP binding
CQZ96_RS11165	COG1607	acyl-coa hydrolase
CQZ96_RS11205	COG0788	formyltetrahydrofolate deformylase activity
CQZ96_RS11230	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
CQZ96_RS11230	COG4651	solute:proton antiporter activity
CQZ96_RS11250	COG0210	DNA helicase
CQZ96_RS11255	COG1929	Belongs to the glycerate kinase type-1 family
CQZ96_RS11285	COG1733	regulation of RNA biosynthetic process
CQZ96_RS11290	COG1028	Short-chain dehydrogenase reductase Sdr
CQZ96_RS11300	COG4770	biotin carboxylase activity
CQZ96_RS11305	COG1984	allophanate hydrolase subunit 2
CQZ96_RS11320	COG1914	H( )-stimulated, divalent metal cation uptake system
CQZ96_RS11330	COG2900	Belongs to the SlyX family
CQZ96_RS11355	COG1560	Kdo2-lipid A biosynthetic process
CQZ96_RS11390	COG0252	asparaginase activity
CQZ96_RS11405	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
CQZ96_RS11415	COG0473	3-isopropylmalate dehydrogenase activity
CQZ96_RS11430	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
CQZ96_RS11445	COG0583	DNA-binding transcription factor activity
CQZ96_RS11460	COG0494	nUDIX hydrolase
CQZ96_RS11480	COG1960	acyl-CoA dehydrogenase activity
CQZ96_RS11510	COG0753	catalase activity
CQZ96_RS11550	COG0583	DNA-binding transcription factor activity
CQZ96_RS11565	COG2378	regulation of single-species biofilm formation
CQZ96_RS11570	COG0546	phosphoglycolate phosphatase activity
CQZ96_RS11575	COG0564	pseudouridine synthase activity
CQZ96_RS11580	COG1530	ribonuclease E activity
CQZ96_RS11585	COG0318	PFAM AMP-dependent synthetase and ligase
CQZ96_RS11625	COG1983	PspC domain protein
CQZ96_RS11630	COG0517	IMP dehydrogenase activity
CQZ96_RS11645	COG0277	FAD linked oxidase domain protein
CQZ96_RS11665	COG0752	glycyl-tRNA synthetase alpha subunit
CQZ96_RS11670	COG0751	glycine-tRNA ligase activity
CQZ96_RS11705	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CQZ96_RS11750	COG2226	methyltransferase
CQZ96_RS11765	COG0628	permease
CQZ96_RS11770	COG2032	superoxide dismutase activity
CQZ96_RS11780	COG1289	transmembrane transporter activity
CQZ96_RS11790	COG2814	Major facilitator Superfamily
CQZ96_RS11825	COG0277	FAD linked oxidase domain protein
CQZ96_RS11830	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CQZ96_RS11835	COG5006	permease, DMT superfamily
CQZ96_RS11845	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
CQZ96_RS11870	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
CQZ96_RS11875	COG5380	lipid catabolic process
CQZ96_RS11890	COG0335	large ribosomal subunit rRNA binding
CQZ96_RS11900	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
CQZ96_RS11905	COG0228	four-way junction DNA binding
CQZ96_RS11940	COG4969	Belongs to the N-Me-Phe pilin family
CQZ96_RS11950	COG0194	GDP metabolic process
CQZ96_RS11955	COG1758	RNA polymerase activity
CQZ96_RS11960	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CQZ96_RS11980	COG3307	-O-antigen
CQZ96_RS11990	COG3307	-O-antigen
CQZ96_RS12005	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
CQZ96_RS12010	COG1704	LemA family
CQZ96_RS12020	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
CQZ96_RS12025	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
CQZ96_RS12030	COG0195	Participates in both transcription termination and antitermination
CQZ96_RS12035	COG0779	Required for maturation of 30S ribosomal subunits
CQZ96_RS12085	COG0237	dephospho-CoA kinase activity
CQZ96_RS12095	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CQZ96_RS12100	COG3123	guanosine phosphorylase activity
CQZ96_RS12105	COG0497	DNA recombination
CQZ96_RS12115	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
CQZ96_RS12135	COG1289	transmembrane transporter activity
CQZ96_RS12145	COG2249	NAD(P)H dehydrogenase (quinone) activity
CQZ96_RS12155	COG1132	(ABC) transporter
CQZ96_RS12175	COG4974	Belongs to the 'phage' integrase family
CQZ96_RS12190	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
CQZ96_RS12195	COG1686	Belongs to the peptidase S11 family
CQZ96_RS12200	COG2197	response regulator
CQZ96_RS12215	COG0793	Belongs to the peptidase S41A family
CQZ96_RS12220	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
CQZ96_RS12225	COG0795	lipopolysaccharide-transporting ATPase activity
CQZ96_RS12230	COG0795	lipopolysaccharide-transporting ATPase activity
CQZ96_RS12260	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CQZ96_RS12300	COG1024	Enoyl-CoA hydratase
CQZ96_RS12300	COG1250	3-hydroxyacyl-CoA dehydrogenase
CQZ96_RS12305	COG0183	Belongs to the thiolase family
CQZ96_RS12330	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
CQZ96_RS12345	COG0326	Molecular chaperone. Has ATPase activity
CQZ96_RS12360	COG2056	Na+-H+ antiporter family
CQZ96_RS12385	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CQZ96_RS12390	COG0085	RNA polymerase activity
CQZ96_RS12395	COG0222	ribosome binding
CQZ96_RS12405	COG0081	regulation of translation
CQZ96_RS12420	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
CQZ96_RS12510	COG0181	hydroxymethylbilane synthase activity
CQZ96_RS12520	COG3275	phosphorelay sensor kinase activity
CQZ96_RS12525	COG0165	Argininosuccinate lyase
CQZ96_RS12560	COG3158	transport of potassium into the cell
CQZ96_RS12615	COG3349	Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'
CQZ96_RS12625	COG1335	isochorismatase
CQZ96_RS12630	COG0583	DNA-binding transcription factor activity
CQZ96_RS12655	COG0629	single-stranded DNA binding
CQZ96_RS12660	COG2814	Major facilitator Superfamily
CQZ96_RS12670	COG0351	phosphomethylpyrimidine kinase
CQZ96_RS12670	COG0352	thiamine-phosphate diphosphorylase activity
CQZ96_RS12670	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
CQZ96_RS12690	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CQZ96_RS12695	COG2267	carboxylic ester hydrolase activity
CQZ96_RS12745	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
CQZ96_RS12750	COG0259	pyridoxamine-phosphate oxidase activity
CQZ96_RS12770	COG0426	domain, Protein
CQZ96_RS12770	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CQZ96_RS12775	COG2119	membrane
CQZ96_RS12800	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
CQZ96_RS12815	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
CQZ96_RS12825	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
CQZ96_RS12835	COG0189	ligase activity
CQZ96_RS12845	COG2226	methyltransferase
CQZ96_RS12850	COG2720	vancomycin resistance protein
CQZ96_RS12865	COG0708	Exodeoxyribonuclease III
CQZ96_RS12870	COG1393	Belongs to the ArsC family
CQZ96_RS12885	COG3706	GGDEF domain
CQZ96_RS12890	COG3706	GGDEF domain
CQZ96_RS12960	COG3150	esterase
CQZ96_RS12975	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
CQZ96_RS12980	COG2918	glutathione biosynthetic process
CQZ96_RS13000	COG2733	membrane
CQZ96_RS13020	COG0436	Aminotransferase
CQZ96_RS13025	COG0534	Mate efflux family protein
CQZ96_RS13085	COG3830	Belongs to the UPF0237 family
CQZ96_RS13085	COG0560	Phosphoserine phosphatase
CQZ96_RS13100	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
CQZ96_RS13105	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CQZ96_RS13110	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
CQZ96_RS13115	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
CQZ96_RS13125	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
CQZ96_RS13130	COG1230	cation diffusion facilitator family transporter
CQZ96_RS13135	COG0640	Transcriptional regulator
CQZ96_RS13150	COG1683	Conserved Protein
CQZ96_RS13155	COG0385	Bile acid
CQZ96_RS13160	COG1335	isochorismatase
CQZ96_RS13165	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CQZ96_RS13205	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
CQZ96_RS13210	COG2819	hydrolase of the alpha beta superfamily
CQZ96_RS13215	COG2983	Belongs to the UPF0260 family
CQZ96_RS13220	COG5487	UPF0391 membrane protein
CQZ96_RS13235	COG1194	a g-specific adenine glycosylase
CQZ96_RS13250	COG2818	Glycosylase
CQZ96_RS13255	COG1064	alcohol dehydrogenase
CQZ96_RS13270	COG0583	DNA-binding transcription factor activity
CQZ96_RS13275	COG0656	L-ascorbic acid biosynthetic process
CQZ96_RS13280	COG2814	Major facilitator Superfamily
CQZ96_RS13325	COG1309	transcriptional regulator
CQZ96_RS13330	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
CQZ96_RS13355	COG2233	PERMEase
CQZ96_RS13370	COG0196	riboflavin kinase activity
CQZ96_RS13375	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
CQZ96_RS13380	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
CQZ96_RS13385	COG1047	Peptidyl-prolyl cis-trans
CQZ96_RS13390	COG1794	racemase activity, acting on amino acids and derivatives
CQZ96_RS13405	COG0174	glutamine synthetase
CQZ96_RS13425	COG0129	dihydroxy-acid dehydratase activity
CQZ96_RS13435	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
CQZ96_RS13435	COG2885	chlorophyll binding
CQZ96_RS13445	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
CQZ96_RS13450	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
CQZ96_RS13450	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CQZ96_RS13460	COG0733	neurotransmitter:sodium symporter activity
CQZ96_RS13465	COG3738	Protein conserved in bacteria
CQZ96_RS13470	COG1012	belongs to the aldehyde dehydrogenase family
CQZ96_RS13510	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
CQZ96_RS13535	COG0596	Alpha beta hydrolase
CQZ96_RS13540	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
CQZ96_RS13545	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
CQZ96_RS13555	COG0488	(ABC) transporter
CQZ96_RS13565	COG0187	DNA topoisomerase II activity
CQZ96_RS13575	COG0592	DNA-directed DNA polymerase activity
CQZ96_RS13580	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
CQZ96_RS13590	COG0594	ribonuclease P activity
CQZ96_RS13595	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
CQZ96_RS13600	COG0706	membrane insertase activity
CQZ96_RS13625	COG1230	cation diffusion facilitator family transporter
CQZ96_RS13635	COG2261	transglycosylase associated protein
CQZ96_RS13645	COG0402	S-adenosylhomocysteine deaminase activity
CQZ96_RS13655	COG0861	Integral membrane protein TerC family
CQZ96_RS13665	COG2814	Major facilitator Superfamily
CQZ96_RS13670	COG2388	GCN5-related N-acetyl-transferase
CQZ96_RS13675	COG2388	GCN5-related N-acetyl-transferase
CQZ96_RS13685	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
CQZ96_RS13705	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
CQZ96_RS13710	COG2951	lytic endotransglycosylase activity
CQZ96_RS13750	COG0443	Heat shock 70 kDa protein
CQZ96_RS13770	COG4521	taurine ABC transporter
CQZ96_RS13775	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
CQZ96_RS13780	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CQZ96_RS13785	COG2175	clavaminate synthase activity
CQZ96_RS13790	COG0737	Belongs to the 5'-nucleotidase family
CQZ96_RS13935	COG1309	transcriptional regulator
CQZ96_RS13940	COG1116	anion transmembrane transporter activity
CQZ96_RS13945	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CQZ96_RS13950	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CQZ96_RS13955	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CQZ96_RS13960	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CQZ96_RS13965	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
CQZ96_RS13965	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
CQZ96_RS13990	COG1028	Short-chain dehydrogenase reductase Sdr
CQZ96_RS13995	COG0546	phosphoglycolate phosphatase activity
CQZ96_RS14000	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
CQZ96_RS14030	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
CQZ96_RS14060	COG3023	N-Acetylmuramoyl-L-alanine amidase
CQZ96_RS14065	COG0728	peptidoglycan biosynthetic process
CQZ96_RS14090	COG1596	polysaccharide export
CQZ96_RS14095	COG1086	Polysaccharide biosynthesis protein
CQZ96_RS14100	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
CQZ96_RS14105	COG1083	cytidylyl-transferase
CQZ96_RS14120	COG2089	acid synthase
CQZ96_RS14145	COG1216	Glycosyl transferase, family 2
CQZ96_RS14150	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
CQZ96_RS14155	COG1210	Utp--glucose-1-phosphate uridylyltransferase
CQZ96_RS14170	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
CQZ96_RS14175	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CQZ96_RS14210	COG0271	Belongs to the BolA IbaG family
CQZ96_RS14220	COG1192	Involved in chromosome partitioning
CQZ96_RS14230	COG0586	Pfam SNARE associated Golgi protein
CQZ96_RS14235	COG2259	Doxx family
CQZ96_RS14245	COG0519	Catalyzes the synthesis of GMP from XMP
CQZ96_RS14245	COG0518	GMP synthase (glutamine-hydrolyzing) activity
CQZ96_RS14250	COG1715	Restriction endonuclease
CQZ96_RS14270	COG1902	pentaerythritol trinitrate reductase activity
CQZ96_RS14275	COG1519	Transferase
CQZ96_RS14280	COG1385	rRNA (uridine-N3-)-methyltransferase activity
CQZ96_RS14285	COG0668	transmembrane transport
CQZ96_RS14295	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CQZ96_RS14315	COG0431	NADPH-dependent FMN reductase
CQZ96_RS14325	COG2814	Major facilitator Superfamily
CQZ96_RS14350	COG4452	Inner membrane protein CreD
CQZ96_RS14355	COG2205	protein histidine kinase activity
CQZ96_RS14360	COG0745	RESPONSE REGULATOR receiver
CQZ96_RS14385	COG0281	malic enzyme
CQZ96_RS14390	COG3501	Rhs element vgr protein
CQZ96_RS14410	COG2837	iron assimilation
CQZ96_RS14425	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CQZ96_RS14430	COG1121	(ABC) transporter
CQZ96_RS14440	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
CQZ96_RS14470	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
CQZ96_RS14480	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
CQZ96_RS14515	COG0386	Belongs to the glutathione peroxidase family
CQZ96_RS14535	COG1309	transcriptional regulator
CQZ96_RS14540	COG0697	spore germination
CQZ96_RS14545	COG0009	L-threonylcarbamoyladenylate synthase
CQZ96_RS14550	COG0758	DNA mediated transformation
CQZ96_RS14555	COG1652	LysM domain
CQZ96_RS14585	COG1309	transcriptional regulator
CQZ96_RS14615	COG2133	pyrroloquinoline quinone binding
CQZ96_RS14635	COG2205	protein histidine kinase activity
CQZ96_RS14635	COG0784	Response regulator, receiver
CQZ96_RS14640	COG3162	membrane
CQZ96_RS14645	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CQZ96_RS14655	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CQZ96_RS14670	COG3706	GGDEF domain
CQZ96_RS14700	COG1253	flavin adenine dinucleotide binding
CQZ96_RS14705	COG3012	SEC-C Motif Domain Protein
CQZ96_RS14710	COG2860	membrane
CQZ96_RS14720	COG0477	Major facilitator Superfamily
CQZ96_RS14730	COG0318	PFAM AMP-dependent synthetase and ligase
CQZ96_RS14745	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
CQZ96_RS14770	COG0606	chelatase, subunit chli
CQZ96_RS14780	COG0347	Belongs to the P(II) protein family
CQZ96_RS14785	COG0004	ammonium transporteR
CQZ96_RS14795	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CQZ96_RS14795	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CQZ96_RS14810	COG0586	Pfam SNARE associated Golgi protein
CQZ96_RS14820	COG0772	Belongs to the SEDS family
CQZ96_RS14830	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CQZ96_RS14835	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
CQZ96_RS14840	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
CQZ96_RS14865	COG0704	Plays a role in the regulation of phosphate uptake
CQZ96_RS14885	COG0488	(ABC) transporter
CQZ96_RS14900	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
CQZ96_RS14915	COG0697	spore germination
CQZ96_RS14945	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
CQZ96_RS14990	COG0427	acetyl-CoA hydrolase
CQZ96_RS14995	COG2205	protein histidine kinase activity
CQZ96_RS15000	COG0745	RESPONSE REGULATOR receiver
CQZ96_RS15015	COG0789	Transcriptional regulator
CQZ96_RS15035	COG4221	oxidoreductase activity
CQZ96_RS15090	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CQZ96_RS15105	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
CQZ96_RS15120	COG3116	cell division
CQZ96_RS15130	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
CQZ96_RS15135	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
CQZ96_RS15140	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CQZ96_RS15145	COG2226	methyltransferase
CQZ96_RS15195	COG0067	glutamate synthase
CQZ96_RS15195	COG0069	glutamate synthase activity
CQZ96_RS15195	COG0070	glutamate synthase
CQZ96_RS15200	COG0493	'glutamate synthase
CQZ96_RS15205	COG2249	NAD(P)H dehydrogenase (quinone) activity
CQZ96_RS15210	COG1733	regulation of RNA biosynthetic process
CQZ96_RS15220	COG0307	riboflavin synthase, alpha
CQZ96_RS15230	COG2212	antiporter activity
CQZ96_RS15240	COG0651	ATP synthesis coupled electron transport
CQZ96_RS15245	COG1006	Multisubunit Na H antiporter MnhC subunit
CQZ96_RS15250	COG2111	Na H antiporter
CQZ96_RS15250	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
CQZ96_RS15270	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
CQZ96_RS15285	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
CQZ96_RS15310	COG1846	Transcriptional regulator
CQZ96_RS15315	COG2309	aminopeptidase activity
CQZ96_RS15320	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CQZ96_RS15325	COG0596	Alpha beta hydrolase
CQZ96_RS15330	COG3473	Maleate cis-trans isomerase
CQZ96_RS15335	COG1335	isochorismatase
CQZ96_RS15340	COG2271	Major facilitator Superfamily
CQZ96_RS15360	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
CQZ96_RS15365	COG1074	ATP-dependent DNA helicase activity
CQZ96_RS15370	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
CQZ96_RS15385	COG1185	polyribonucleotide nucleotidyltransferase activity
CQZ96_RS15390	COG0598	Magnesium transport protein CorA
CQZ96_RS15395	COG2841	Protein conserved in bacteria
CQZ96_RS15400	COG0789	Transcriptional regulator
CQZ96_RS15410	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
CQZ96_RS15415	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
CQZ96_RS15415	COG0475	glutathione-regulated potassium exporter activity
CQZ96_RS15420	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
CQZ96_RS15445	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CQZ96_RS15445	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CQZ96_RS15450	COG0815	Transfers the fatty acyl group on membrane lipoproteins
CQZ96_RS15455	COG4535	Mg2 and Co2 transporter CorC
CQZ96_RS15460	COG0425	Belongs to the sulfur carrier protein TusA family
CQZ96_RS15465	COG3501	Rhs element vgr protein
CQZ96_RS15485	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
CQZ96_RS15485	COG0644	oxidoreductase
CQZ96_RS15495	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
CQZ96_RS15510	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CQZ96_RS15515	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
CQZ96_RS15545	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CQZ96_RS15550	COG0254	rRNA binding
CQZ96_RS15555	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
CQZ96_RS15565	COG0534	Mate efflux family protein
CQZ96_RS15575	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CQZ96_RS15585	COG1960	acyl-CoA dehydrogenase activity
CQZ96_RS15610	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CQZ96_RS15615	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
CQZ96_RS15630	COG0513	Belongs to the DEAD box helicase family
CQZ96_RS15635	COG1127	ABC transporter
CQZ96_RS15640	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
CQZ96_RS15645	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
CQZ96_RS15660	COG0598	Magnesium transport protein CorA
CQZ96_RS15670	COG0494	nUDIX hydrolase
CQZ96_RS15675	COG1040	competence protein
CQZ96_RS15680	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
CQZ96_RS15695	COG2937	Belongs to the GPAT DAPAT family
CQZ96_RS15700	COG1946	Acyl-CoA thioesterase
CQZ96_RS15705	COG1301	dicarboxylic acid transport
CQZ96_RS15720	COG1959	2 iron, 2 sulfur cluster binding
CQZ96_RS15730	COG0433	COG0433 Predicted ATPase
CQZ96_RS15745	COG0051	transcription antitermination factor activity, RNA binding
CQZ96_RS15750	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
CQZ96_RS15755	COG0088	Forms part of the polypeptide exit tunnel
CQZ96_RS15770	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
CQZ96_RS15800	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
CQZ96_RS15820	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
CQZ96_RS15835	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
CQZ96_RS15870	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
CQZ96_RS15875	COG0202	RNA polymerase activity
CQZ96_RS15880	COG0203	ribosomal protein L17
CQZ96_RS15885	COG2072	flavoprotein involved in K transport
CQZ96_RS15890	COG1960	acyl-CoA dehydrogenase activity
CQZ96_RS15895	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
CQZ96_RS15940	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
CQZ96_RS15945	COG0339	signal peptide processing
CQZ96_RS15985	COG0765	amino acid transport
CQZ96_RS15990	COG0765	amino acid transport
CQZ96_RS15995	COG1126	abc transporter atp-binding protein
CQZ96_RS16000	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CQZ96_RS16005	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CQZ96_RS16015	COG2814	Major facilitator Superfamily
CQZ96_RS16040	COG0179	Fumarylacetoacetate (FAA) hydrolase
CQZ96_RS16050	COG1295	ribonuclease BN
CQZ96_RS16065	COG1946	Acyl-CoA thioesterase
CQZ96_RS16095	COG3781	membrane
CQZ96_RS16100	COG2003	Belongs to the UPF0758 family
CQZ96_RS16105	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CQZ96_RS16110	COG3783	Cytochrome b(562)
CQZ96_RS16145	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
CQZ96_RS16155	COG1162	GTPase activity
CQZ96_RS16160	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
CQZ96_RS16175	COG3501	Rhs element vgr protein
CQZ96_RS16205	COG1538	Outer membrane efflux protein
CQZ96_RS16210	COG1136	(ABC) transporter
CQZ96_RS16210	COG0577	efflux transmembrane transporter activity
CQZ96_RS16215	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CQZ96_RS16240	COG0028	Belongs to the TPP enzyme family
CQZ96_RS16245	COG0440	acetolactate synthase activity
CQZ96_RS16270	COG0671	phosphoesterase, PA-phosphatase related
CQZ96_RS16295	COG1426	Protein conserved in bacteria
CQZ96_RS16330	COG0004	ammonium transporteR
CQZ96_RS16340	COG3622	Belongs to the hyi family
CQZ96_RS16345	COG2084	Dehydrogenase
CQZ96_RS16355	COG5002	protein histidine kinase activity
CQZ96_RS16355	COG2205	protein histidine kinase activity
CQZ96_RS16355	COG0784	Response regulator, receiver
CQZ96_RS16375	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CQZ96_RS16390	COG3956	TIGRFAM MazG family protein
CQZ96_RS16400	COG0617	tRNA 3'-terminal CCA addition
CQZ96_RS16405	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
CQZ96_RS16415	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
CQZ96_RS16420	COG1660	Displays ATPase and GTPase activities
CQZ96_RS16425	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CQZ96_RS16430	COG3028	Belongs to the UPF0307 family
CQZ96_RS16440	COG2205	protein histidine kinase activity
CQZ96_RS16445	COG0745	RESPONSE REGULATOR receiver
CQZ96_RS16450	COG2315	Protein conserved in bacteria
CQZ96_RS16460	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
CQZ96_RS16480	COG2096	Adenosyltransferase
CQZ96_RS16485	COG4206	TonB-dependent receptor
CQZ96_RS16515	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CQZ96_RS16525	COG3384	dioxygenase
CQZ96_RS16560	COG1764	response to oxidative stress
CQZ96_RS16565	COG1846	Transcriptional regulator
CQZ96_RS16570	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CQZ96_RS16620	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
CQZ96_RS16625	COG1960	acyl-CoA dehydrogenase activity
CQZ96_RS16630	COG1960	acyl-CoA dehydrogenase activity
CQZ96_RS16655	COG1028	Short-chain dehydrogenase reductase Sdr
CQZ96_RS16660	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
CQZ96_RS16665	COG1960	acyl-CoA dehydrogenase activity
CQZ96_RS16670	COG1024	Enoyl-CoA hydratase
CQZ96_RS16680	COG0564	pseudouridine synthase activity
CQZ96_RS16685	COG0477	Major facilitator Superfamily
CQZ96_RS16690	COG1272	protein, Hemolysin III
CQZ96_RS16740	COG3501	Rhs element vgr protein
CQZ96_RS16790	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CQZ96_RS16805	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
CQZ96_RS16830	COG0730	response to heat
CQZ96_RS16840	COG1196	nuclear chromosome segregation
CQZ96_RS16850	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
CQZ96_RS16860	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CQZ96_RS16870	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
CQZ96_RS16880	COG2267	carboxylic ester hydrolase activity
CQZ96_RS16895	COG4106	trans-aconitate 2-methyltransferase activity
CQZ96_RS16910	COG3422	double-strand break repair
CQZ96_RS16925	COG0494	nUDIX hydrolase
CQZ96_RS16940	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CQZ96_RS16945	COG2207	Transcriptional regulator
CQZ96_RS16950	COG0454	-acetyltransferase
CQZ96_RS16965	COG0183	Belongs to the thiolase family
CQZ96_RS16975	COG3152	Membrane
CQZ96_RS17015	COG0285	dihydrofolate synthase activity
CQZ96_RS17040	COG0009	L-threonylcarbamoyladenylate synthase
CQZ96_RS17045	COG3101	peptidyl-lysine hydroxylation
CQZ96_RS17050	COG1399	metal-binding, possibly nucleic acid-binding protein
CQZ96_RS17070	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CQZ96_RS17075	COG1652	LysM domain
CQZ96_RS17080	COG0450	alkyl hydroperoxide reductase
CQZ96_RS17095	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
CQZ96_RS17100	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
CQZ96_RS17130	COG2199	diguanylate cyclase activity
CQZ96_RS17175	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CQZ96_RS17175	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CQZ96_RS17210	COG0489	protein tyrosine kinase activity
CQZ96_RS17215	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
CQZ96_RS17270	COG0442	prolyl-tRNA aminoacylation
CQZ96_RS17295	COG0840	transmembrane signaling receptor activity
CQZ96_RS17300	COG0784	Response regulator, receiver
CQZ96_RS17300	COG2198	Histidine kinase
CQZ96_RS17300	COG0643	Histidine kinase
CQZ96_RS17325	COG2832	Protein of unknown function (DUF454)
CQZ96_RS17380	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
CQZ96_RS17390	COG1289	transmembrane transporter activity
CQZ96_RS17395	COG2814	Major facilitator Superfamily
CQZ96_RS17410	COG0668	transmembrane transport
CQZ96_RS17425	COG2081	HI0933 family
CQZ96_RS17430	COG2515	1-aminocyclopropane-1-carboxylate deaminase
CQZ96_RS17445	COG1309	transcriptional regulator
CQZ96_RS17460	COG2226	methyltransferase
CQZ96_RS17475	COG4716	Myosin-crossreactive antigen
CQZ96_RS17500	COG1126	abc transporter atp-binding protein
CQZ96_RS17505	COG0765	amino acid transport
CQZ96_RS17510	COG0765	amino acid transport
CQZ96_RS17515	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CQZ96_RS17540	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
CQZ96_RS17550	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
CQZ96_RS17600	COG0494	nUDIX hydrolase
CQZ96_RS17605	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
CQZ96_RS17610	COG1214	PFAM Peptidase M22, glycoprotease
CQZ96_RS17615	COG1968	undecaprenyl-diphosphatase activity
CQZ96_RS17630	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
CQZ96_RS17635	COG4269	membrane
CQZ96_RS17645	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
CQZ96_RS17655	COG2132	Multicopper oxidase
CQZ96_RS17680	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CQZ96_RS17695	COG0351	phosphomethylpyrimidine kinase
CQZ96_RS17695	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
CQZ96_RS17695	COG0352	thiamine-phosphate diphosphorylase activity
CQZ96_RS17725	COG1113	amino acid transport
CQZ96_RS17750	COG3831	ATPase activity
CQZ96_RS17760	COG3552	Protein containing von Willebrand factor type A (VWA) domain
CQZ96_RS17770	COG0714	Associated with various cellular activities
CQZ96_RS17780	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
CQZ96_RS17820	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
CQZ96_RS17825	COG0500	methyltransferase
CQZ96_RS17830	COG0492	ferredoxin-NADP+ reductase activity
CQZ96_RS17835	COG0531	amino acid
CQZ96_RS17835	COG1674	ftsk spoiiie
CQZ96_RS17845	COG1280	lysine exporter protein (LysE YggA)
CQZ96_RS17870	COG0523	cobalamin synthesis protein
CQZ96_RS17875	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
CQZ96_RS17890	COG2268	Band 7 protein
CQZ96_RS17895	COG1585	Membrane protein implicated in regulation of membrane protease activity
CQZ96_RS17910	COG3706	GGDEF domain
CQZ96_RS17915	COG0477	Major facilitator Superfamily
CQZ96_RS17920	COG0242	peptide deformylase activity
CQZ96_RS17925	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
CQZ96_RS17935	COG0582	viral genome integration into host DNA
CQZ96_RS17960	COG3501	Rhs element vgr protein
CQZ96_RS18025	COG2176	DNA-directed DNA polymerase activity
CQZ96_RS18030	COG0210	DNA helicase
CQZ96_RS18030	COG0210	DNA helicase
CQZ96_RS18085	COG3321	synthase
CQZ96_RS18085	COG0604	alcohol dehydrogenase
CQZ96_RS18090	COG1028	Short-chain dehydrogenase reductase Sdr
CQZ96_RS18140	COG4308	Limonene-1,2-epoxide hydrolase catalytic domain
CQZ96_RS18160	COG3220	belongs to the UPF0276 family
CQZ96_RS18170	COG1595	DNA-templated transcription, initiation
CQZ96_RS18195	COG2351	hydroxyisourate hydrolase activity
CQZ96_RS18230	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
CQZ96_RS18250	COG0745	RESPONSE REGULATOR receiver
CQZ96_RS18280	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
CQZ96_RS18300	COG2271	Major facilitator Superfamily
CQZ96_RS18365	COG0477	Major facilitator Superfamily
CQZ96_RS18370	COG2030	dehydratase
CQZ96_RS18370	COG1012	belongs to the aldehyde dehydrogenase family
CQZ96_RS18375	COG3396	Phenylacetate-CoA oxygenase
CQZ96_RS18380	COG3460	Phenylacetate-CoA oxygenase
CQZ96_RS18385	COG3396	Phenylacetate-CoA oxygenase
CQZ96_RS18390	COG2151	metal-sulfur cluster biosynthetic enzyme
CQZ96_RS18395	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CQZ96_RS18400	COG1024	Enoyl-CoA hydratase
CQZ96_RS18405	COG1024	Enoyl-CoA hydratase
CQZ96_RS18410	COG1250	3-hydroxyacyl-CoA dehydrogenase
CQZ96_RS18415	COG0183	Belongs to the thiolase family
CQZ96_RS18420	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
CQZ96_RS18425	COG3327	negative regulation of DNA-templated transcription, initiation
CQZ96_RS18445	COG2985	domain, Protein
CQZ96_RS18460	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CQZ96_RS18465	COG2819	hydrolase of the alpha beta superfamily
CQZ96_RS18470	COG1414	Transcriptional regulator
CQZ96_RS18475	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CQZ96_RS18490	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CQZ96_RS18520	COG0477	Major facilitator Superfamily
CQZ96_RS18535	COG2995	paraquat-inducible protein a
CQZ96_RS18540	COG3008	intermembrane lipid transfer
CQZ96_RS18540	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
CQZ96_RS18590	COG0583	DNA-binding transcription factor activity
CQZ96_RS18595	COG1028	Short-chain dehydrogenase reductase Sdr
CQZ96_RS18605	COG2610	gluconate transmembrane transporter activity
CQZ96_RS18610	COG0583	DNA-binding transcription factor activity
CQZ96_RS18620	COG1595	DNA-templated transcription, initiation
CQZ96_RS18645	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CQZ96_RS18650	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CQZ96_RS18660	COG0789	Transcriptional regulator
CQZ96_RS18665	COG3501	Rhs element vgr protein
CQZ96_RS18705	COG1733	regulation of RNA biosynthetic process
CQZ96_RS18725	COG2771	luxR family
CQZ96_RS18750	COG1028	Short-chain dehydrogenase reductase Sdr
CQZ96_RS18760	COG0446	pyridine nucleotide-disulphide oxidoreductase
CQZ96_RS18765	COG2271	Major facilitator Superfamily
CQZ96_RS18780	COG1028	Short-chain dehydrogenase reductase Sdr
CQZ96_RS18795	COG0028	Belongs to the TPP enzyme family
CQZ96_RS18805	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CQZ96_RS18810	COG0235	Class ii aldolase
CQZ96_RS18815	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CQZ96_RS18825	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CQZ96_RS18860	COG2814	Major facilitator Superfamily
CQZ96_RS18865	COG1309	transcriptional regulator
CQZ96_RS18885	COG1309	transcriptional regulator
CQZ96_RS18890	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CQZ96_RS18910	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
CQZ96_RS18915	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
CQZ96_RS18920	COG0022	dehydrogenase e1 component
CQZ96_RS18925	COG0508	dehydrogenase complex catalyzes the overall conversion of
CQZ96_RS18930	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CQZ96_RS18940	COG1063	alcohol dehydrogenase
CQZ96_RS18960	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CQZ96_RS18965	COG4605	iron ion homeostasis
CQZ96_RS18970	COG4604	ABC transporter, ATP-binding protein
CQZ96_RS18975	COG4607	ABC-type enterochelin transport system periplasmic component
CQZ96_RS18980	COG4774	siderophore transport
CQZ96_RS19005	COG0601	transmembrane transport
CQZ96_RS19010	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CQZ96_RS19030	COG1132	(ABC) transporter
CQZ96_RS19035	COG1132	(ABC) transporter
CQZ96_RS19050	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CQZ96_RS19065	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
CQZ96_RS19080	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CQZ96_RS19085	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CQZ96_RS19090	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CQZ96_RS19095	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CQZ96_RS19130	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CQZ96_RS19140	COG1902	pentaerythritol trinitrate reductase activity
CQZ96_RS19140	COG0446	pyridine nucleotide-disulphide oxidoreductase
CQZ96_RS19145	COG0789	Transcriptional regulator
CQZ96_RS19150	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
CQZ96_RS19160	COG1469	GTP cyclohydrolase I activity
CQZ96_RS19170	COG0523	cobalamin synthesis protein
CQZ96_RS19200	COG0583	DNA-binding transcription factor activity
CQZ96_RS19225	COG2318	DinB family
CQZ96_RS19255	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CQZ96_RS19265	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CQZ96_RS19270	COG1077	Cell shape determining protein MreB Mrl
CQZ96_RS19275	COG1792	Involved in formation and maintenance of cell shape
CQZ96_RS19280	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
CQZ96_RS19285	COG0424	maF-like protein
CQZ96_RS19290	COG1530	ribonuclease E activity
CQZ96_RS19300	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CQZ96_RS19310	COG0560	Phosphoserine phosphatase
CQZ96_RS19330	COG4181	ATPase activity
CQZ96_RS19335	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
CQZ96_RS19360	COG0583	DNA-binding transcription factor activity
CQZ96_RS19370	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CQZ96_RS19375	COG1773	rubredoxin
CQZ96_RS19380	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
CQZ96_RS19410	COG2354	Protein conserved in bacteria
CQZ96_RS19415	COG2321	neutral zinc metallopeptidase
CQZ96_RS19440	COG1024	Enoyl-CoA hydratase
CQZ96_RS19460	COG0625	glutathione transferase activity
CQZ96_RS19470	COG1113	amino acid transport
CQZ96_RS19475	COG0110	maltose O-acetyltransferase activity
CQZ96_RS19480	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
CQZ96_RS19495	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
CQZ96_RS19500	COG0505	Belongs to the CarA family
CQZ96_RS19520	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
CQZ96_RS19525	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CQZ96_RS19530	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
CQZ96_RS19570	COG0300	oxidoreductase activity
CQZ96_RS19575	COG2072	flavoprotein involved in K transport
CQZ96_RS19595	COG3104	oligopeptide transport
CQZ96_RS19605	COG2009	succinate dehydrogenase
CQZ96_RS19610	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
CQZ96_RS19615	COG1053	succinate dehydrogenase
CQZ96_RS19620	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
CQZ96_RS19635	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CQZ96_RS19645	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
CQZ96_RS19650	COG1028	Short-chain dehydrogenase reductase Sdr
CQZ96_RS19665	COG0742	ribosomal rna small subunit methyltransferase
CQZ96_RS19670	COG0768	penicillin binding
CQZ96_RS19695	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
CQZ96_RS19700	COG2878	Part of a membrane complex involved in electron transport
CQZ96_RS19705	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
CQZ96_RS19720	COG3384	dioxygenase
CQZ96_RS19725	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
CQZ96_RS19730	COG2234	aminopeptidase activity
CQZ96_RS19750	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CQZ96_RS19755	COG1522	sequence-specific DNA binding
CQZ96_RS19760	COG1280	lysine exporter protein (LysE YggA)
CQZ96_RS19790	COG0778	Nitroreductase
CQZ96_RS19795	COG1024	Enoyl-CoA hydratase
CQZ96_RS19800	COG1056	cytidyltransferase-related domain
CQZ96_RS19800	COG1051	belongs to the nudix hydrolase family
CQZ96_RS19805	COG2353	YceI-like domain
CQZ96_RS19815	COG0625	glutathione transferase activity
CQZ96_RS19820	COG1942	4-Oxalocrotonate Tautomerase
CQZ96_RS19830	COG0583	DNA-binding transcription factor activity
CQZ96_RS19840	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
CQZ96_RS19855	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
CQZ96_RS19860	COG0602	queuosine metabolic process
CQZ96_RS19880	COG0583	DNA-binding transcription factor activity
CQZ96_RS19885	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
CQZ96_RS19890	COG4208	sulfate ABC transporter
CQZ96_RS19895	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
CQZ96_RS19905	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
CQZ96_RS19915	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
CQZ96_RS19955	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CQZ96_RS19970	COG2207	Transcriptional regulator
CQZ96_RS20000	COG2207	Transcriptional regulator
CQZ96_RS20020	COG0505	Belongs to the CarA family
CQZ96_RS20030	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
CQZ96_RS20045	COG0625	glutathione transferase activity
CQZ96_RS20050	COG4221	oxidoreductase activity
CQZ96_RS20080	COG0571	ribonuclease III activity
CQZ96_RS20085	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
CQZ96_RS20095	COG1381	Involved in DNA repair and RecF pathway recombination
CQZ96_RS20100	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
CQZ96_RS20110	COG0667	Aldo Keto reductase
CQZ96_RS20140	COG0415	Belongs to the DNA photolyase family
CQZ96_RS20145	COG1047	Peptidyl-prolyl cis-trans
CQZ96_RS20150	COG1252	NADH dehydrogenase
CQZ96_RS20155	COG1686	Belongs to the peptidase S11 family
CQZ96_RS20165	COG2351	hydroxyisourate hydrolase activity
CQZ96_RS20180	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
CQZ96_RS20195	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
CQZ96_RS20215	COG0281	malic enzyme
CQZ96_RS20215	COG0280	phosphate acetyltransferase
CQZ96_RS20225	COG1385	rRNA (uridine-N3-)-methyltransferase activity
CQZ96_RS20235	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
CQZ96_RS20280	COG1960	acyl-CoA dehydrogenase activity
CQZ96_RS20295	COG0477	Major facilitator Superfamily
CQZ96_RS20325	COG0583	DNA-binding transcription factor activity
CQZ96_RS20330	COG0697	spore germination
CQZ96_RS20340	COG2186	Transcriptional regulator
CQZ96_RS20350	COG0277	FAD linked oxidase domain protein
CQZ96_RS20360	COG0446	pyridine nucleotide-disulphide oxidoreductase
CQZ96_RS20360	COG1902	pentaerythritol trinitrate reductase activity
CQZ96_RS20375	COG2831	hemolysin activation secretion protein
CQZ96_RS20425	COG2814	Major facilitator Superfamily
CQZ96_RS20440	COG1012	belongs to the aldehyde dehydrogenase family
CQZ96_RS20450	COG3485	protocatechuate 3,4-dioxygenase
CQZ96_RS20465	COG1262	PFAM Formylglycine-generating sulfatase enzyme
CQZ96_RS20480	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
CQZ96_RS20485	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
CQZ96_RS20490	COG0183	Belongs to the thiolase family
CQZ96_RS20495	COG0583	DNA-binding transcription factor activity
CQZ96_RS20530	COG1840	ABC-type Fe3 transport system, periplasmic component
CQZ96_RS20535	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
CQZ96_RS20555	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CQZ96_RS20565	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
CQZ96_RS20570	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
CQZ96_RS20575	COG0659	secondary active sulfate transmembrane transporter activity
CQZ96_RS20590	COG2175	clavaminate synthase activity
CQZ96_RS20595	COG3246	L-lysine catabolic process to acetate
CQZ96_RS20615	COG2855	membrane
CQZ96_RS20665	COG3188	usher protein
CQZ96_RS20685	COG1454	alcohol dehydrogenase
CQZ96_RS20690	COG2610	gluconate transmembrane transporter activity
CQZ96_RS20695	COG1414	Transcriptional regulator
CQZ96_RS20700	COG1113	amino acid transport
CQZ96_RS20720	COG4221	oxidoreductase activity
CQZ96_RS20725	COG4689	acetoacetate decarboxylase
CQZ96_RS20735	COG1902	pentaerythritol trinitrate reductase activity
CQZ96_RS20735	COG0446	pyridine nucleotide-disulphide oxidoreductase
CQZ96_RS20765	COG2015	COG2015, Alkyl sulfatase and related hydrolases
CQZ96_RS20825	COG1629	transport
CQZ96_RS20850	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
CQZ96_RS20860	COG1012	belongs to the aldehyde dehydrogenase family
CQZ96_RS20865	COG0251	oxidation-reduction process
CQZ96_RS20880	COG0583	DNA-binding transcription factor activity
CQZ96_RS20910	COG4774	siderophore transport
CQZ96_RS20920	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
CQZ96_RS20925	COG0583	DNA-binding transcription factor activity
CQZ96_RS20940	COG0439	Biotin carboxylase
CQZ96_RS20945	COG0864	Transcriptional regulator
CQZ96_RS20955	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CQZ96_RS20975	COG1116	anion transmembrane transporter activity
CQZ96_RS20995	COG0596	Alpha beta hydrolase
CQZ96_RS21000	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CQZ96_RS21005	COG1335	isochorismatase
CQZ96_RS21010	COG0251	oxidation-reduction process
CQZ96_RS21015	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CQZ96_RS21020	COG2233	PERMEase
CQZ96_RS21030	COG0235	Class ii aldolase
CQZ96_RS21035	COG1741	Belongs to the pirin family
CQZ96_RS21050	COG3739	integral membrane protein
CQZ96_RS21070	COG0531	amino acid
CQZ96_RS21075	COG4303	Ethanolamine ammonia lyase large subunit
CQZ96_RS21080	COG4302	ethanolamine ammonia-lyase activity
CQZ96_RS21115	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
CQZ96_RS21120	COG0512	Glutamine amidotransferase of anthranilate synthase
CQZ96_RS21135	COG4574	serine-type endopeptidase inhibitor activity
CQZ96_RS21190	COG0582	viral genome integration into host DNA
CQZ96_RS21225	COG0174	glutamine synthetase
CQZ96_RS21245	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CQZ96_RS21270	COG0823	Involved in the tonB-independent uptake of proteins
CQZ96_RS21295	COG0824	Thioesterase
CQZ96_RS21325	COG2031	fatty acid transporter
CQZ96_RS21330	COG4771	TonB-dependent receptor
CQZ96_RS21335	COG2255	four-way junction helicase activity
CQZ96_RS21360	COG0047	phosphoribosylformylglycinamidine synthase activity
CQZ96_RS21360	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
CQZ96_RS21380	COG1301	dicarboxylic acid transport
CQZ96_RS21395	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CQZ96_RS21420	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
CQZ96_RS21430	COG1671	Belongs to the UPF0178 family
CQZ96_RS21475	COG0517	IMP dehydrogenase activity
CQZ96_RS21475	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
CQZ96_RS21480	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
CQZ96_RS21490	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
CQZ96_RS21495	COG1137	ATPase activity