locus-tag class description AMD27_RS00005 PF00308 Bacterial dnaA protein AMD27_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix AMD27_RS00005 PF11638 DnaA N-terminal domain AMD27_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain AMD27_RS00010 PF02767 DNA polymerase III beta subunit, central domain AMD27_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain AMD27_RS00015 PF02463 RecF/RecN/SMC N terminal domain AMD27_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD27_RS00020 PF18053 DNA gyrase B subunit insert domain AMD27_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus AMD27_RS00020 PF00204 DNA gyrase B AMD27_RS00020 PF01751 Toprim domain AMD27_RS00040 PF01521 Iron-sulphur cluster biosynthesis AMD27_RS00045 PF00561 alpha/beta hydrolase fold AMD27_RS00050 PF03702 Anhydro-N-acetylmuramic acid kinase AMD27_RS00055 PF00579 tRNA synthetases class I (W and Y) AMD27_RS00060 PF12848 ABC transporter AMD27_RS00060 PF00005 ABC transporter AMD27_RS00070 PF13411 MerR HTH family regulatory protein AMD27_RS00075 PF00012 Hsp70 protein AMD27_RS00080 PF01025 GrpE AMD27_RS00095 PF07859 alpha/beta hydrolase fold AMD27_RS00100 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AMD27_RS00130 PF07690 Major Facilitator Superfamily AMD27_RS00135 PF00171 Aldehyde dehydrogenase family AMD27_RS00140 PF06940 Domain of unknown function (DUF1287) AMD27_RS00145 PF00209 Sodium:neurotransmitter symporter family AMD27_RS00155 PF01189 16S rRNA methyltransferase RsmB/F AMD27_RS00155 PF01029 NusB family AMD27_RS00160 PF02911 Formyl transferase, C-terminal domain AMD27_RS00160 PF00551 Formyl transferase AMD27_RS00170 PF05662 Coiled stalk of trimeric autotransporter adhesin AMD27_RS00170 PF05658 Head domain of trimeric autotransporter adhesin AMD27_RS00170 PF03895 YadA-like membrane anchor domain AMD27_RS00170 PF13018 Extended Signal Peptide of Type V secretion system AMD27_RS00175 PF00691 OmpA family AMD27_RS00175 PF04355 SmpA / OmlA family AMD27_RS00190 PF00920 Dehydratase family AMD27_RS00215 PF00860 Permease family AMD27_RS00220 PF00990 Diguanylate cyclase, GGDEF domain AMD27_RS00225 PF00311 Phosphoenolpyruvate carboxylase AMD27_RS00235 PF13533 Biotin-lipoyl like AMD27_RS00240 PF00873 AcrB/AcrD/AcrF family AMD27_RS00250 PF00226 DnaJ domain AMD27_RS00250 PF00684 DnaJ central domain AMD27_RS00250 PF01556 DnaJ C terminal domain AMD27_RS00260 PF00106 short chain dehydrogenase AMD27_RS00265 PF13419 Haloacid dehalogenase-like hydrolase AMD27_RS00275 PF01323 DSBA-like thioredoxin domain AMD27_RS00280 PF00440 Bacterial regulatory proteins, tetR family AMD27_RS00285 PF00175 Oxidoreductase NAD-binding domain AMD27_RS00285 PF00970 Oxidoreductase FAD-binding domain AMD27_RS00285 PF00042 Globin AMD27_RS00290 PF00487 Fatty acid desaturase AMD27_RS00310 PF01138 3' exoribonuclease family, domain 1 AMD27_RS00310 PF03725 3' exoribonuclease family, domain 2 AMD27_RS00325 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AMD27_RS00325 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AMD27_RS00330 PF01510 N-acetylmuramoyl-L-alanine amidase AMD27_RS00335 PF03023 Lipid II flippase MurJ AMD27_RS00340 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMD27_RS00340 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AMD27_RS00345 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMD27_RS00345 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AMD27_RS00350 PF02706 Chain length determinant protein AMD27_RS00350 PF13614 AAA domain AMD27_RS00350 PF13807 G-rich domain on putative tyrosine kinase AMD27_RS00355 PF01451 Low molecular weight phosphotyrosine protein phosphatase AMD27_RS00360 PF18412 Outer-membrane lipoprotein Wza C-terminal domain AMD27_RS00360 PF10531 SLBB domain AMD27_RS00360 PF02563 Polysaccharide biosynthesis/export protein AMD27_RS00365 PF16363 GDP-mannose 4,6 dehydratase AMD27_RS00370 PF04321 RmlD substrate binding domain AMD27_RS00375 PF00483 Nucleotidyl transferase AMD27_RS00380 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AMD27_RS00385 PF01943 Polysaccharide biosynthesis protein AMD27_RS00390 PF02350 UDP-N-acetylglucosamine 2-epimerase AMD27_RS00400 PF00535 Glycosyl transferase family 2 AMD27_RS00410 PF00535 Glycosyl transferase family 2 AMD27_RS00415 PF12464 Maltose acetyltransferase AMD27_RS00415 PF00132 Bacterial transferase hexapeptide (six repeats) AMD27_RS00420 PF01370 NAD dependent epimerase/dehydratase family AMD27_RS00430 PF02397 Bacterial sugar transferase AMD27_RS00435 PF00483 Nucleotidyl transferase AMD27_RS00440 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AMD27_RS00440 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AMD27_RS00440 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AMD27_RS00445 PF00342 Phosphoglucose isomerase AMD27_RS00450 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMD27_RS00450 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMD27_RS00450 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMD27_RS00450 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMD27_RS00465 PF01722 BolA-like protein AMD27_RS00485 PF09335 SNARE associated Golgi protein AMD27_RS00490 PF07681 DoxX AMD27_RS00495 PF00958 GMP synthase C terminal domain AMD27_RS00495 PF02540 NAD synthase AMD27_RS00495 PF00117 Glutamine amidotransferase class-I AMD27_RS00500 PF04471 Restriction endonuclease AMD27_RS00500 PF14338 Mrr N-terminal domain AMD27_RS00505 PF02678 Pirin AMD27_RS00505 PF05726 Pirin C-terminal cupin domain AMD27_RS00520 PF00561 alpha/beta hydrolase fold AMD27_RS00525 PF12833 Helix-turn-helix domain AMD27_RS00540 PF03485 Arginyl tRNA synthetase N terminal domain AMD27_RS00540 PF05746 DALR anticodon binding domain AMD27_RS00540 PF00750 tRNA synthetases class I (R) AMD27_RS00555 PF03949 Malic enzyme, NAD binding domain AMD27_RS00555 PF00390 Malic enzyme, N-terminal domain AMD27_RS00565 PF04717 Type VI secretion system, phage-baseplate injector AMD27_RS00565 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) AMD27_RS00565 PF13296 Putative type VI secretion system Rhs element Vgr AMD27_RS00585 PF04261 Dyp-type peroxidase family AMD27_RS00590 PF01810 LysE type translocator AMD27_RS00595 PF01810 LysE type translocator AMD27_RS00600 PF00950 ABC 3 transport family AMD27_RS00605 PF00005 ABC transporter AMD27_RS00625 PF00119 ATP synthase A chain AMD27_RS00630 PF00137 ATP synthase subunit C AMD27_RS00635 PF00430 ATP synthase B/B' CF(0) AMD27_RS00640 PF00213 ATP synthase delta (OSCP) subunit AMD27_RS00645 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMD27_RS00645 PF00306 ATP synthase alpha/beta chain, C terminal domain AMD27_RS00645 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMD27_RS00650 PF00231 ATP synthase AMD27_RS00655 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMD27_RS00655 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMD27_RS00660 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AMD27_RS00690 PF00255 Glutathione peroxidase AMD27_RS00705 PF01300 Telomere recombination AMD27_RS00710 PF02481 DNA recombination-mediator protein A AMD27_RS00710 PF17782 DprA winged helix domain AMD27_RS00715 PF01476 LysM domain AMD27_RS00720 PF01327 Polypeptide deformylase AMD27_RS00770 PF13340 Putative transposase of IS4/5 family (DUF4096) AMD27_RS00790 PF07690 Major Facilitator Superfamily AMD27_RS00795 PF07690 Major Facilitator Superfamily AMD27_RS00805 PF04055 Radical SAM superfamily AMD27_RS00805 PF08497 Radical SAM N-terminal AMD27_RS00805 PF11842 Domain of unknown function (DUF3362) AMD27_RS00820 PF11798 IMS family HHH motif AMD27_RS00820 PF11799 impB/mucB/samB family C-terminal domain AMD27_RS00820 PF00817 impB/mucB/samB family AMD27_RS00830 PF07690 Major Facilitator Superfamily AMD27_RS00835 PF03641 Possible lysine decarboxylase AMD27_RS00840 PF03471 Transporter associated domain AMD27_RS00840 PF03741 Integral membrane protein TerC family AMD27_RS00845 PF02810 SEC-C motif AMD27_RS00850 PF03458 UPF0126 domain AMD27_RS00855 PF07690 Major Facilitator Superfamily AMD27_RS00860 PF03989 DNA gyrase C-terminal domain, beta-propeller AMD27_RS00860 PF00521 DNA gyrase/topoisomerase IV, subunit A AMD27_RS00865 PF00501 AMP-binding enzyme AMD27_RS00865 PF13193 AMP-binding enzyme C-terminal domain AMD27_RS00880 PF00719 Inorganic pyrophosphatase AMD27_RS00885 PF03573 outer membrane porin, OprD family AMD27_RS00900 PF01078 Magnesium chelatase, subunit ChlI AMD27_RS00900 PF13335 Magnesium chelatase, subunit ChlI C-terminal AMD27_RS00910 PF00543 Nitrogen regulatory protein P-II AMD27_RS00915 PF00909 Ammonium Transporter Family AMD27_RS00920 PF03477 ATP cone domain AMD27_RS00925 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AMD27_RS00925 PF01872 RibD C-terminal domain AMD27_RS00935 PF00677 Lumazine binding domain AMD27_RS00940 PF09335 SNARE associated Golgi protein AMD27_RS00960 PF02789 Cytosol aminopeptidase family, N-terminal domain AMD27_RS00960 PF00883 Cytosol aminopeptidase family, catalytic domain AMD27_RS00965 PF03739 Lipopolysaccharide export system permease LptF/LptG AMD27_RS00970 PF03739 Lipopolysaccharide export system permease LptF/LptG AMD27_RS00975 PF01676 Metalloenzyme superfamily AMD27_RS00975 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AMD27_RS00980 PF17820 PDZ domain AMD27_RS00980 PF01471 Putative peptidoglycan binding domain AMD27_RS00980 PF03572 Peptidase family S41 AMD27_RS00985 PF02954 Bacterial regulatory protein, Fis family AMD27_RS00985 PF00158 Sigma-54 interaction domain AMD27_RS00985 PF00072 Response regulator receiver domain AMD27_RS00990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD27_RS00990 PF00512 His Kinase A (phospho-acceptor) domain AMD27_RS00995 PF00196 Bacterial regulatory proteins, luxR family AMD27_RS00995 PF00072 Response regulator receiver domain AMD27_RS01000 PF00768 D-alanyl-D-alanine carboxypeptidase AMD27_RS01010 PF00291 Pyridoxal-phosphate dependent enzyme AMD27_RS01015 PF03447 Homoserine dehydrogenase, NAD binding domain AMD27_RS01015 PF00742 Homoserine dehydrogenase AMD27_RS01015 PF01842 ACT domain AMD27_RS01020 PF13098 Thioredoxin-like domain AMD27_RS01020 PF10411 Disulfide bond isomerase protein N-terminus AMD27_RS01025 PF00589 Phage integrase family AMD27_RS01025 PF02899 Phage integrase, N-terminal SAM-like domain AMD27_RS01035 PF07664 Ferrous iron transport protein B C terminus AMD27_RS01035 PF02421 Ferrous iron transport protein B AMD27_RS01035 PF07670 Nucleoside recognition AMD27_RS01045 PF08245 Mur ligase middle domain AMD27_RS01045 PF02875 Mur ligase family, glutamate ligase domain AMD27_RS01050 PF01098 Cell cycle protein AMD27_RS01060 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMD27_RS01065 PF01258 Prokaryotic dksA/traR C4-type zinc finger AMD27_RS01070 PF00149 Calcineurin-like phosphoesterase AMD27_RS01075 PF00293 NUDIX domain AMD27_RS01080 PF13667 ThiC-associated domain AMD27_RS01080 PF01964 Radical SAM ThiC family AMD27_RS01095 PF01895 PhoU domain AMD27_RS01100 PF04362 Bacterial Fe(2+) trafficking AMD27_RS01105 PF14698 Argininosuccinate lyase C-terminal AMD27_RS01105 PF00206 Lyase AMD27_RS01110 PF06580 Histidine kinase AMD27_RS01110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD27_RS01115 PF04397 LytTr DNA-binding domain AMD27_RS01115 PF00072 Response regulator receiver domain AMD27_RS01120 PF03900 Porphobilinogen deaminase, C-terminal domain AMD27_RS01120 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AMD27_RS01145 PF00816 H-NS histone family AMD27_RS01160 PF03958 Bacterial type II/III secretion system short domain AMD27_RS01160 PF00263 Bacterial type II and III secretion system protein AMD27_RS01165 PF16697 Inner membrane component of T3SS, cytoplasmic domain AMD27_RS01170 PF13419 Haloacid dehalogenase-like hydrolase AMD27_RS01175 PF00425 chorismate binding enzyme AMD27_RS01175 PF04715 Anthranilate synthase component I, N terminal region AMD27_RS01200 PF03143 Elongation factor Tu C-terminal domain AMD27_RS01200 PF03144 Elongation factor Tu domain 2 AMD27_RS01200 PF00009 Elongation factor Tu GTP binding domain AMD27_RS01210 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AMD27_RS01215 PF02357 Transcription termination factor nusG AMD27_RS01215 PF00467 KOW motif AMD27_RS01220 PF03946 Ribosomal protein L11, N-terminal domain AMD27_RS01220 PF00298 Ribosomal protein L11, RNA binding domain AMD27_RS01225 PF00687 Ribosomal protein L1p/L10e family AMD27_RS01230 PF00466 Ribosomal protein L10 AMD27_RS01235 PF16320 Ribosomal protein L7/L12 dimerisation domain AMD27_RS01235 PF00542 Ribosomal protein L7/L12 C-terminal domain AMD27_RS01240 PF04563 RNA polymerase beta subunit AMD27_RS01240 PF04561 RNA polymerase Rpb2, domain 2 AMD27_RS01240 PF04565 RNA polymerase Rpb2, domain 3 AMD27_RS01240 PF10385 RNA polymerase beta subunit external 1 domain AMD27_RS01240 PF00562 RNA polymerase Rpb2, domain 6 AMD27_RS01240 PF04560 RNA polymerase Rpb2, domain 7 AMD27_RS01245 PF05000 RNA polymerase Rpb1, domain 4 AMD27_RS01245 PF04983 RNA polymerase Rpb1, domain 3 AMD27_RS01245 PF00623 RNA polymerase Rpb1, domain 2 AMD27_RS01245 PF04998 RNA polymerase Rpb1, domain 5 AMD27_RS01245 PF04997 RNA polymerase Rpb1, domain 1 AMD27_RS01265 PF00561 alpha/beta hydrolase fold AMD27_RS01270 PF03553 Na+/H+ antiporter family AMD27_RS01270 PF13726 Na+-H+ antiporter family AMD27_RS01275 PF03922 OmpW family AMD27_RS01285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD27_RS01285 PF00183 Hsp90 protein AMD27_RS01305 PF01323 DSBA-like thioredoxin domain AMD27_RS01315 PF00990 Diguanylate cyclase, GGDEF domain AMD27_RS01335 PF02803 Thiolase, C-terminal domain AMD27_RS01335 PF00108 Thiolase, N-terminal domain AMD27_RS01340 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AMD27_RS01340 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AMD27_RS01340 PF00378 Enoyl-CoA hydratase/isomerase AMD27_RS01350 PF11724 YvbH-like oligomerisation region AMD27_RS01350 PF08000 Bacterial PH domain AMD27_RS01360 PF02151 UvrB/uvrC motif AMD27_RS01360 PF01541 GIY-YIG catalytic domain AMD27_RS01360 PF08459 UvrC Helix-hairpin-helix N-terminal AMD27_RS01370 PF01066 CDP-alcohol phosphatidyltransferase AMD27_RS01395 PF04632 Fusaric acid resistance protein family AMD27_RS01405 PF13533 Biotin-lipoyl like AMD27_RS01410 PF03652 Holliday junction resolvase AMD27_RS01415 PF02622 Uncharacterized ACR, COG1678 AMD27_RS01420 PF02463 RecF/RecN/SMC N terminal domain AMD27_RS01430 PF06865 Pyrimidine/purine nucleoside phosphorylase AMD27_RS01435 PF00588 SpoU rRNA Methylase family AMD27_RS01435 PF08032 RNA 2'-O ribose methyltransferase substrate binding AMD27_RS01445 PF01121 Dephospho-CoA kinase AMD27_RS01450 PF06750 Bacterial Peptidase A24 N-terminal domain AMD27_RS01450 PF01478 Type IV leader peptidase family AMD27_RS01455 PF00482 Type II secretion system (T2SS), protein F AMD27_RS01460 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AMD27_RS01460 PF00437 Type II/IV secretion system protein AMD27_RS01465 PF00121 Triosephosphate isomerase AMD27_RS01470 PF03840 Preprotein translocase SecG subunit AMD27_RS01500 PF17384 RimP C-terminal SH3 domain AMD27_RS01500 PF02576 RimP N-terminal domain AMD27_RS01505 PF08529 NusA N-terminal domain AMD27_RS01505 PF00575 S1 RNA binding domain AMD27_RS01505 PF13184 NusA-like KH domain AMD27_RS01510 PF08364 Bacterial translation initiation factor IF-2 associated region AMD27_RS01510 PF11987 Translation-initiation factor 2 AMD27_RS01510 PF04760 Translation initiation factor IF-2, N-terminal region AMD27_RS01510 PF00009 Elongation factor Tu GTP binding domain AMD27_RS01515 PF02033 Ribosome-binding factor A AMD27_RS01525 PF04011 LemA family AMD27_RS01530 PF04536 TPM domain AMD27_RS01540 PF00114 Pilin (bacterial filament) AMD27_RS01540 PF07963 Prokaryotic N-terminal methylation motif AMD27_RS01545 PF04932 O-Antigen ligase AMD27_RS01545 PF11846 Virulence factor membrane-bound polymerase, C-terminal AMD27_RS01545 PF15864 Protein glycosylation ligase AMD27_RS01550 PF00114 Pilin (bacterial filament) AMD27_RS01550 PF07963 Prokaryotic N-terminal methylation motif AMD27_RS01555 PF15864 Protein glycosylation ligase AMD27_RS01555 PF04932 O-Antigen ligase AMD27_RS01555 PF11846 Virulence factor membrane-bound polymerase, C-terminal AMD27_RS01560 PF00210 Ferritin-like domain AMD27_RS01565 PF04324 BFD-like [2Fe-2S] binding domain AMD27_RS01570 PF01042 Endoribonuclease L-PSP AMD27_RS01575 PF13291 ACT domain AMD27_RS01575 PF04607 Region found in RelA / SpoT proteins AMD27_RS01575 PF02824 TGS domain AMD27_RS01580 PF01192 RNA polymerase Rpb6 AMD27_RS01585 PF00625 Guanylate kinase AMD27_RS01590 PF02401 LytB protein AMD27_RS01595 PF07963 Prokaryotic N-terminal methylation motif AMD27_RS01595 PF00114 Pilin (bacterial filament) AMD27_RS01620 PF00114 Pilin (bacterial filament) AMD27_RS01620 PF07963 Prokaryotic N-terminal methylation motif AMD27_RS01660 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor AMD27_RS01660 PF07963 Prokaryotic N-terminal methylation motif AMD27_RS01665 PF00886 Ribosomal protein S16 AMD27_RS01670 PF01782 RimM N-terminal domain AMD27_RS01670 PF05239 PRC-barrel domain AMD27_RS01675 PF01746 tRNA (Guanine-1)-methyltransferase AMD27_RS01680 PF01245 Ribosomal protein L19 AMD27_RS01685 PF00561 alpha/beta hydrolase fold AMD27_RS01690 PF00561 alpha/beta hydrolase fold AMD27_RS01695 PF00561 alpha/beta hydrolase fold AMD27_RS01700 PF00561 alpha/beta hydrolase fold AMD27_RS01705 PF03280 Proteobacterial lipase chaperone protein AMD27_RS01710 PF01509 TruB family pseudouridylate synthase (N terminal domain) AMD27_RS01710 PF09157 Pseudouridine synthase II TruB, C-terminal AMD27_RS01710 PF16198 tRNA pseudouridylate synthase B C-terminal domain AMD27_RS01715 PF01925 Sulfite exporter TauE/SafE AMD27_RS01725 PF00892 EamA-like transporter family AMD27_RS01730 PF00892 EamA-like transporter family AMD27_RS01735 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMD27_RS01735 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMD27_RS01740 PF02913 FAD linked oxidases, C-terminal domain AMD27_RS01740 PF01565 FAD binding domain AMD27_RS01750 PF07690 Major Facilitator Superfamily AMD27_RS01755 PF12823 Domain of unknown function (DUF3817) AMD27_RS01765 PF12805 FUSC-like inner membrane protein yccS AMD27_RS01775 PF00080 Copper/zinc superoxide dismutase (SODC) AMD27_RS01780 PF01594 AI-2E family transporter AMD27_RS01785 PF13614 AAA domain AMD27_RS01810 PF08241 Methyltransferase domain AMD27_RS01860 PF05746 DALR anticodon binding domain AMD27_RS01860 PF02092 Glycyl-tRNA synthetase beta subunit AMD27_RS01865 PF02091 Glycyl-tRNA synthetase alpha subunit AMD27_RS01885 PF04024 PspC domain AMD27_RS01905 PF13193 AMP-binding enzyme C-terminal domain AMD27_RS01905 PF00501 AMP-binding enzyme AMD27_RS01910 PF12111 Polyribonucleotide phosphorylase C terminal AMD27_RS01910 PF10150 Ribonuclease E/G family AMD27_RS01910 PF00575 S1 RNA binding domain AMD27_RS01915 PF00849 RNA pseudouridylate synthase AMD27_RS01915 PF01479 S4 domain AMD27_RS01920 PF03466 LysR substrate binding domain AMD27_RS01920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD27_RS01935 PF12706 Beta-lactamase superfamily domain AMD27_RS01940 PF00199 Catalase AMD27_RS01940 PF06628 Catalase-related immune-responsive AMD27_RS01945 PF02770 Acyl-CoA dehydrogenase, middle domain AMD27_RS01945 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD27_RS01945 PF18158 Adaptive response protein AidB N-terminal domain AMD27_RS01955 PF02896 PEP-utilising enzyme, TIM barrel domain AMD27_RS01955 PF05524 PEP-utilising enzyme, N-terminal AMD27_RS01955 PF00391 PEP-utilising enzyme, mobile domain AMD27_RS01955 PF01590 GAF domain AMD27_RS01960 PF00293 NUDIX domain AMD27_RS01990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD27_RS01990 PF03466 LysR substrate binding domain AMD27_RS02000 PF00330 Aconitase family (aconitate hydratase) AMD27_RS02005 PF00694 Aconitase C-terminal domain AMD27_RS02015 PF00180 Isocitrate/isopropylmalate dehydrogenase AMD27_RS02030 PF01176 Translation initiation factor 1A / IF-1 AMD27_RS02040 PF01416 tRNA pseudouridine synthase AMD27_RS02060 PF01118 Semialdehyde dehydrogenase, NAD binding domain AMD27_RS02060 PF02774 Semialdehyde dehydrogenase, dimerisation domain AMD27_RS02070 PF03279 Bacterial lipid A biosynthesis acyltransferase AMD27_RS02080 PF01774 UreD urease accessory protein AMD27_RS02085 PF00547 Urease, gamma subunit AMD27_RS02090 PF00699 Urease beta subunit AMD27_RS02095 PF00449 Urease alpha-subunit, N-terminal domain AMD27_RS02095 PF01979 Amidohydrolase family AMD27_RS02110 PF00293 NUDIX domain AMD27_RS02110 PF13344 Haloacid dehalogenase-like hydrolase AMD27_RS02115 PF00959 Phage lysozyme AMD27_RS02125 PF02814 UreE urease accessory protein, N-terminal domain AMD27_RS02125 PF05194 UreE urease accessory protein, C-terminal domain AMD27_RS02130 PF01730 UreF AMD27_RS02135 PF02492 CobW/HypB/UreG, nucleotide-binding domain AMD27_RS02140 PF00005 ABC transporter AMD27_RS02140 PF16326 ABC transporter C-terminal domain AMD27_RS02140 PF12848 ABC transporter AMD27_RS02145 PF04102 SlyX AMD27_RS02155 PF13737 Transposase DDE domain AMD27_RS02165 PF01751 Toprim domain AMD27_RS02165 PF01396 Topoisomerase DNA binding C4 zinc finger AMD27_RS02165 PF01131 DNA topoisomerase AMD27_RS02165 PF08272 Topoisomerase I zinc-ribbon-like AMD27_RS02170 PF02595 Glycerate kinase family AMD27_RS02180 PF00580 UvrD/REP helicase N-terminal domain AMD27_RS02180 PF13361 UvrD-like helicase C-terminal domain AMD27_RS02200 PF02254 TrkA-N domain AMD27_RS02200 PF00999 Sodium/hydrogen exchanger family AMD27_RS02205 PF00471 Ribosomal protein L33 AMD27_RS02210 PF00830 Ribosomal L28 family AMD27_RS02215 PF00171 Aldehyde dehydrogenase family AMD27_RS02220 PF00440 Bacterial regulatory proteins, tetR family AMD27_RS02220 PF08360 QacR-like protein, C-terminal region AMD27_RS02225 PF00551 Formyl transferase AMD27_RS02225 PF01842 ACT domain AMD27_RS02235 PF01618 MotA/TolQ/ExbB proton channel family AMD27_RS02245 PF01625 Peptide methionine sulfoxide reductase AMD27_RS02260 PF00186 Dihydrofolate reductase AMD27_RS02265 PF00303 Thymidylate synthase AMD27_RS02285 PF01790 Prolipoprotein diacylglyceryl transferase AMD27_RS02300 PF00902 Sec-independent protein translocase protein (TatC) AMD27_RS02305 PF02416 mttA/Hcf106 family AMD27_RS02310 PF02416 mttA/Hcf106 family AMD27_RS02320 PF01725 Ham1 family AMD27_RS02330 PF07021 Methionine biosynthesis protein MetW AMD27_RS02330 PF00561 alpha/beta hydrolase fold AMD27_RS02335 PF00561 alpha/beta hydrolase fold AMD27_RS02340 PF00682 HMGL-like AMD27_RS02340 PF08502 LeuA allosteric (dimerisation) domain AMD27_RS02345 PF18331 PKHD-type hydroxylase C-terminal domain AMD27_RS02345 PF13640 2OG-Fe(II) oxygenase superfamily AMD27_RS02350 PF00593 TonB dependent receptor AMD27_RS02350 PF07715 TonB-dependent Receptor Plug Domain AMD27_RS02360 PF13613 Helix-turn-helix of DDE superfamily endonuclease AMD27_RS02360 PF13359 DDE superfamily endonuclease AMD27_RS02365 PF05697 Bacterial trigger factor protein (TF) AMD27_RS02365 PF05698 Bacterial trigger factor protein (TF) C-terminus AMD27_RS02365 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMD27_RS02370 PF00574 Clp protease AMD27_RS02375 PF06689 ClpX C4-type zinc finger AMD27_RS02375 PF10431 C-terminal, D2-small domain, of ClpB protein AMD27_RS02375 PF07724 AAA domain (Cdc48 subfamily) AMD27_RS02390 PF05681 Fumarate hydratase (Fumerase) AMD27_RS02390 PF05683 Fumarase C-terminus AMD27_RS02405 PF07085 DRTGG domain AMD27_RS02405 PF01515 Phosphate acetyl/butaryl transferase AMD27_RS02410 PF00871 Acetokinase family AMD27_RS02420 PF13359 DDE superfamily endonuclease AMD27_RS02420 PF13613 Helix-turn-helix of DDE superfamily endonuclease AMD27_RS02430 PF00171 Aldehyde dehydrogenase family AMD27_RS02445 PF00933 Glycosyl hydrolase family 3 N terminal domain AMD27_RS02450 PF11818 C-terminal domain of tail specific protease (DUF3340) AMD27_RS02450 PF00595 PDZ domain AMD27_RS02450 PF03572 Peptidase family S41 AMD27_RS02450 PF17804 Tail specific protease N-terminal domain AMD27_RS02455 PF00990 Diguanylate cyclase, GGDEF domain AMD27_RS02455 PF00563 EAL domain AMD27_RS02455 PF03707 Bacterial signalling protein N terminal repeat AMD27_RS02460 PF00009 Elongation factor Tu GTP binding domain AMD27_RS02460 PF16658 Class II release factor RF3, C-terminal domain AMD27_RS02460 PF03144 Elongation factor Tu domain 2 AMD27_RS02475 PF01026 TatD related DNase AMD27_RS02480 PF00330 Aconitase family (aconitate hydratase) AMD27_RS02480 PF00694 Aconitase C-terminal domain AMD27_RS02490 PF00899 ThiF family AMD27_RS02495 PF01207 Dihydrouridine synthase (Dus) AMD27_RS02505 PF15608 PELOTA RNA binding domain AMD27_RS02505 PF11202 Phosphoribosyl transferase (PRTase) AMD27_RS02525 PF02342 TerD domain AMD27_RS02530 PF02342 TerD domain AMD27_RS02535 PF02342 TerD domain AMD27_RS02540 PF10138 vWA found in TerF C terminus AMD27_RS02545 PF01987 Mitochondrial biogenesis AIM24 AMD27_RS02550 PF02342 TerD domain AMD27_RS02555 PF07690 Major Facilitator Superfamily AMD27_RS02565 PF00376 MerR family regulatory protein AMD27_RS02565 PF09278 MerR, DNA binding AMD27_RS02575 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AMD27_RS02575 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AMD27_RS02580 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AMD27_RS02585 PF02233 NAD(P) transhydrogenase beta subunit AMD27_RS02595 PF01261 Xylose isomerase-like TIM barrel AMD27_RS02600 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMD27_RS02600 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AMD27_RS02605 PF00378 Enoyl-CoA hydratase/isomerase AMD27_RS02610 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMD27_RS02610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD27_RS02610 PF00512 His Kinase A (phospho-acceptor) domain AMD27_RS02610 PF00672 HAMP domain AMD27_RS02610 PF00072 Response regulator receiver domain AMD27_RS02610 PF01627 Hpt domain AMD27_RS02615 PF00291 Pyridoxal-phosphate dependent enzyme AMD27_RS02625 PF05958 tRNA (Uracil-5-)-methyltransferase AMD27_RS02630 PF04607 Region found in RelA / SpoT proteins AMD27_RS02630 PF02824 TGS domain AMD27_RS02630 PF13291 ACT domain AMD27_RS02635 PF00106 short chain dehydrogenase AMD27_RS02640 PF03819 MazG nucleotide pyrophosphohydrolase domain AMD27_RS02650 PF01743 Poly A polymerase head domain AMD27_RS02650 PF12626 Polymerase A arginine-rich C-terminus AMD27_RS02650 PF12627 Probable RNA and SrmB- binding site of polymerase A AMD27_RS02655 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AMD27_RS02660 PF02548 Ketopantoate hydroxymethyltransferase AMD27_RS02665 PF02569 Pantoate-beta-alanine ligase AMD27_RS02670 PF03668 P-loop ATPase protein family AMD27_RS02675 PF00381 PTS HPr component phosphorylation site AMD27_RS02680 PF04751 Protein of unknown function (DUF615) AMD27_RS02690 PF00501 AMP-binding enzyme AMD27_RS02690 PF13193 AMP-binding enzyme C-terminal domain AMD27_RS02695 PF13187 4Fe-4S dicluster domain AMD27_RS02695 PF01645 Conserved region in glutamate synthase AMD27_RS02705 PF03129 Anticodon binding domain AMD27_RS02705 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMD27_RS02705 PF02824 TGS domain AMD27_RS02705 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AMD27_RS02710 PF05198 Translation initiation factor IF-3, N-terminal domain AMD27_RS02710 PF00707 Translation initiation factor IF-3, C-terminal domain AMD27_RS02715 PF00011 Hsp20/alpha crystallin family AMD27_RS02720 PF00043 Glutathione S-transferase, C-terminal domain AMD27_RS02720 PF02798 Glutathione S-transferase, N-terminal domain AMD27_RS02730 PF09335 SNARE associated Golgi protein AMD27_RS02740 PF01632 Ribosomal protein L35 AMD27_RS02745 PF00453 Ribosomal protein L20 AMD27_RS02775 PF01409 tRNA synthetases class II core domain (F) AMD27_RS02775 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AMD27_RS02780 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AMD27_RS02780 PF01588 Putative tRNA binding domain AMD27_RS02780 PF03484 tRNA synthetase B5 domain AMD27_RS02780 PF03483 B3/4 domain AMD27_RS02780 PF03147 Ferredoxin-fold anticodon binding domain AMD27_RS02785 PF00216 Bacterial DNA-binding protein AMD27_RS02795 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMD27_RS02795 PF07498 Rho termination factor, N-terminal domain AMD27_RS02795 PF07497 Rho termination factor, RNA-binding domain AMD27_RS02800 PF00085 Thioredoxin AMD27_RS02805 PF02541 Ppx/GppA phosphatase family AMD27_RS02810 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AMD27_RS02815 PF11734 TilS substrate C-terminal domain AMD27_RS02815 PF01171 PP-loop family AMD27_RS02815 PF09179 TilS substrate binding domain AMD27_RS02820 PF03807 NADP oxidoreductase coenzyme F420-dependent AMD27_RS02820 PF14748 Pyrroline-5-carboxylate reductase dimerisation AMD27_RS02825 PF02325 YGGT family AMD27_RS02830 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AMD27_RS02830 PF00476 DNA polymerase family A AMD27_RS02830 PF01612 3'-5' exonuclease AMD27_RS02830 PF01367 5'-3' exonuclease, C-terminal SAM fold AMD27_RS02850 PF00437 Type II/IV secretion system protein AMD27_RS02865 PF02566 OsmC-like protein AMD27_RS02870 PF00795 Carbon-nitrogen hydrolase AMD27_RS02915 PF02770 Acyl-CoA dehydrogenase, middle domain AMD27_RS02915 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD27_RS02915 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD27_RS02920 PF17932 Tetracyclin repressor-like, C-terminal domain AMD27_RS02920 PF00440 Bacterial regulatory proteins, tetR family AMD27_RS02935 PF01039 Carboxyl transferase domain AMD27_RS02940 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD27_RS02940 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD27_RS02940 PF02770 Acyl-CoA dehydrogenase, middle domain AMD27_RS02950 PF00289 Biotin carboxylase, N-terminal domain AMD27_RS02950 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMD27_RS02950 PF00364 Biotin-requiring enzyme AMD27_RS02950 PF02785 Biotin carboxylase C-terminal domain AMD27_RS02980 PF04386 Stringent starvation protein B AMD27_RS02985 PF00043 Glutathione S-transferase, C-terminal domain AMD27_RS02985 PF02798 Glutathione S-transferase, N-terminal domain AMD27_RS02990 PF00380 Ribosomal protein S9/S16 AMD27_RS02995 PF00572 Ribosomal protein L13 AMD27_RS03000 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AMD27_RS03005 PF00398 Ribosomal RNA adenine dimethylase AMD27_RS03010 PF00149 Calcineurin-like phosphoesterase AMD27_RS03025 PF04172 LrgB-like family AMD27_RS03035 PF16360 GTP-binding GTPase Middle Region AMD27_RS03035 PF13167 GTP-binding GTPase N-terminal AMD27_RS03035 PF01926 50S ribosome-binding GTPase AMD27_RS03045 PF13091 PLD-like domain AMD27_RS03050 PF10518 TAT (twin-arginine translocation) pathway signal sequence AMD27_RS03050 PF00149 Calcineurin-like phosphoesterase AMD27_RS03055 PF07690 Major Facilitator Superfamily AMD27_RS03055 PF00083 Sugar (and other) transporter AMD27_RS03060 PF03006 Haemolysin-III related AMD27_RS03070 PF13673 Acetyltransferase (GNAT) domain AMD27_RS03075 PF13419 Haloacid dehalogenase-like hydrolase AMD27_RS03090 PF13340 Putative transposase of IS4/5 family (DUF4096) AMD27_RS03105 PF01810 LysE type translocator AMD27_RS03110 PF01037 Lrp/AsnC ligand binding domain AMD27_RS03115 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AMD27_RS03115 PF00378 Enoyl-CoA hydratase/isomerase AMD27_RS03115 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AMD27_RS03120 PF02803 Thiolase, C-terminal domain AMD27_RS03120 PF00108 Thiolase, N-terminal domain AMD27_RS03130 PF00313 'Cold-shock' DNA-binding domain AMD27_RS03135 PF12833 Helix-turn-helix domain AMD27_RS03135 PF02311 AraC-like ligand binding domain AMD27_RS03140 PF02515 CoA-transferase family III AMD27_RS03165 PF03553 Na+/H+ antiporter family AMD27_RS03170 PF00290 Tryptophan synthase alpha chain AMD27_RS03175 PF01039 Carboxyl transferase domain AMD27_RS03180 PF08245 Mur ligase middle domain AMD27_RS03180 PF02875 Mur ligase family, glutamate ligase domain AMD27_RS03190 PF00753 Metallo-beta-lactamase superfamily AMD27_RS03195 PF00578 AhpC/TSA family AMD27_RS03195 PF10417 C-terminal domain of 1-Cys peroxiredoxin AMD27_RS03200 PF01043 SecA preprotein cross-linking domain AMD27_RS03200 PF07517 SecA DEAD-like domain AMD27_RS03200 PF02810 SEC-C motif AMD27_RS03200 PF07516 SecA Wing and Scaffold domain AMD27_RS03210 PF01960 ArgJ family AMD27_RS03215 PF02445 Quinolinate synthetase A protein AMD27_RS03240 PF01389 OmpA-like transmembrane domain AMD27_RS03240 PF00691 OmpA family AMD27_RS03245 PF17152 Periplasmic sensor domain AMD27_RS03245 PF00990 Diguanylate cyclase, GGDEF domain AMD27_RS03285 PF13613 Helix-turn-helix of DDE superfamily endonuclease AMD27_RS03285 PF13359 DDE superfamily endonuclease AMD27_RS03295 PF00005 ABC transporter AMD27_RS03300 PF00528 Binding-protein-dependent transport system inner membrane component AMD27_RS03305 PF00528 Binding-protein-dependent transport system inner membrane component AMD27_RS03310 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMD27_RS03315 PF00309 Sigma-54 factor, Activator interacting domain (AID) AMD27_RS03315 PF04552 Sigma-54, DNA binding domain AMD27_RS03315 PF04963 Sigma-54 factor, core binding domain AMD27_RS03320 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AMD27_RS03325 PF01722 BolA-like protein AMD27_RS03330 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AMD27_RS03335 PF01634 ATP phosphoribosyltransferase AMD27_RS03340 PF00815 Histidinol dehydrogenase AMD27_RS03345 PF00155 Aminotransferase class I and II AMD27_RS03350 PF00425 chorismate binding enzyme AMD27_RS03350 PF04715 Anthranilate synthase component I, N terminal region AMD27_RS03390 PF00293 NUDIX domain AMD27_RS03395 PF00132 Bacterial transferase hexapeptide (six repeats) AMD27_RS03400 PF00814 Glycoprotease family AMD27_RS03405 PF02673 Bacitracin resistance protein BacA AMD27_RS03410 PF04445 Putative SAM-dependent methyltransferase AMD27_RS03420 PF00756 Putative esterase AMD27_RS03440 PF00834 Ribulose-phosphate 3 epimerase family AMD27_RS03445 PF00893 Small Multidrug Resistance protein AMD27_RS03450 PF00893 Small Multidrug Resistance protein AMD27_RS03455 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AMD27_RS03455 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AMD27_RS03460 PF08378 Nuclease-related domain AMD27_RS03465 PF02581 Thiamine monophosphate synthase AMD27_RS03465 PF08543 Phosphomethylpyrimidine kinase AMD27_RS03470 PF13419 Haloacid dehalogenase-like hydrolase AMD27_RS03475 PF01037 Lrp/AsnC ligand binding domain AMD27_RS03480 PF01266 FAD dependent oxidoreductase AMD27_RS03485 PF01168 Alanine racemase, N-terminal domain AMD27_RS03485 PF00842 Alanine racemase, C-terminal domain AMD27_RS03490 PF01042 Endoribonuclease L-PSP AMD27_RS03495 PF00324 Amino acid permease AMD27_RS03500 PF01757 Acyltransferase family AMD27_RS03505 PF03653 Uncharacterised protein family (UPF0093) AMD27_RS03510 PF00109 Beta-ketoacyl synthase, N-terminal domain AMD27_RS03510 PF02801 Beta-ketoacyl synthase, C-terminal domain AMD27_RS03520 PF00164 Ribosomal protein S12/S23 AMD27_RS03525 PF00177 Ribosomal protein S7p/S5e AMD27_RS03530 PF00679 Elongation factor G C-terminus AMD27_RS03530 PF14492 Elongation Factor G, domain II AMD27_RS03530 PF00009 Elongation factor Tu GTP binding domain AMD27_RS03530 PF03144 Elongation factor Tu domain 2 AMD27_RS03530 PF03764 Elongation factor G, domain IV AMD27_RS03535 PF00009 Elongation factor Tu GTP binding domain AMD27_RS03535 PF03143 Elongation factor Tu C-terminal domain AMD27_RS03535 PF03144 Elongation factor Tu domain 2 AMD27_RS03545 PF00583 Acetyltransferase (GNAT) family AMD27_RS03550 PF04376 Arginine-tRNA-protein transferase, N terminus AMD27_RS03550 PF04377 Arginine-tRNA-protein transferase, C terminus AMD27_RS03555 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AMD27_RS03560 PF13847 Methyltransferase domain AMD27_RS03560 PF10119 Predicted methyltransferase regulatory domain AMD27_RS03565 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD27_RS03570 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AMD27_RS03570 PF01580 FtsK/SpoIIIE family AMD27_RS03570 PF17854 FtsK alpha domain AMD27_RS03570 PF09397 Ftsk gamma domain AMD27_RS03580 PF03776 Septum formation topological specificity factor MinE AMD27_RS03585 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AMD27_RS03590 PF03775 Septum formation inhibitor MinC, C-terminal domain AMD27_RS03600 PF01553 Acyltransferase AMD27_RS03610 PF00580 UvrD/REP helicase N-terminal domain AMD27_RS03610 PF13361 UvrD-like helicase C-terminal domain AMD27_RS03615 PF00692 dUTPase AMD27_RS03620 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMD27_RS03620 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMD27_RS03620 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMD27_RS03620 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMD27_RS03625 PF00696 Amino acid kinase family AMD27_RS03630 PF13230 Glutamine amidotransferases class-II AMD27_RS03635 PF01814 Hemerythrin HHE cation binding domain AMD27_RS03645 PF03658 RnfH family Ubiquitin AMD27_RS03650 PF04355 SmpA / OmlA family AMD27_RS03655 PF01475 Ferric uptake regulator family AMD27_RS03660 PF00437 Type II/IV secretion system protein AMD27_RS03665 PF00437 Type II/IV secretion system protein AMD27_RS03670 PF01168 Alanine racemase, N-terminal domain AMD27_RS03685 PF00149 Calcineurin-like phosphoesterase AMD27_RS03685 PF12320 Type 5 capsule protein repressor C-terminal domain AMD27_RS03690 PF00795 Carbon-nitrogen hydrolase AMD27_RS03695 PF07724 AAA domain (Cdc48 subfamily) AMD27_RS03695 PF10431 C-terminal, D2-small domain, of ClpB protein AMD27_RS03700 PF02293 AmiS/UreI family transporter AMD27_RS03725 PF08338 Domain of unknown function (DUF1731) AMD27_RS03725 PF01370 NAD dependent epimerase/dehydratase family AMD27_RS03730 PF01266 FAD dependent oxidoreductase AMD27_RS03735 PF00490 Delta-aminolevulinic acid dehydratase AMD27_RS03740 PF03061 Thioesterase superfamily AMD27_RS03745 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMD27_RS03745 PF00529 HlyD membrane-fusion protein of T1SS AMD27_RS03750 PF07690 Major Facilitator Superfamily AMD27_RS03755 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AMD27_RS03755 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AMD27_RS03765 PF02384 N-6 DNA Methylase AMD27_RS03765 PF12161 HsdM N-terminal domain AMD27_RS03790 PF04480 Protein of unknown function (DUF559) AMD27_RS03795 PF12008 Type I restriction and modification enzyme - subunit R C terminal AMD27_RS03795 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AMD27_RS03795 PF18766 SWI2/SNF2 ATPase AMD27_RS03815 PF13784 Fic/DOC family N-terminal AMD27_RS03815 PF02661 Fic/DOC family AMD27_RS03855 PF13613 Helix-turn-helix of DDE superfamily endonuclease AMD27_RS03855 PF13359 DDE superfamily endonuclease AMD27_RS03880 PF04183 IucA / IucC family AMD27_RS03880 PF06276 Ferric iron reductase FhuF-like transporter AMD27_RS03885 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AMD27_RS03890 PF07690 Major Facilitator Superfamily AMD27_RS03895 PF06276 Ferric iron reductase FhuF-like transporter AMD27_RS03895 PF04183 IucA / IucC family AMD27_RS03900 PF06276 Ferric iron reductase FhuF-like transporter AMD27_RS03900 PF04183 IucA / IucC family AMD27_RS03920 PF07715 TonB-dependent Receptor Plug Domain AMD27_RS03920 PF00593 TonB dependent receptor AMD27_RS03935 PF09339 IclR helix-turn-helix domain AMD27_RS03935 PF01614 Bacterial transcriptional regulator AMD27_RS03940 PF00355 Rieske [2Fe-2S] domain AMD27_RS03950 PF00355 Rieske [2Fe-2S] domain AMD27_RS03955 PF00106 short chain dehydrogenase AMD27_RS03960 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD27_RS03965 PF14759 Reductase C-terminal AMD27_RS03965 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD27_RS03970 PF07690 Major Facilitator Superfamily AMD27_RS03980 PF00561 alpha/beta hydrolase fold AMD27_RS03990 PF01958 Domain of unknown function DUF108 AMD27_RS03990 PF03447 Homoserine dehydrogenase, NAD binding domain AMD27_RS03995 PF00171 Aldehyde dehydrogenase family AMD27_RS04000 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMD27_RS04000 PF00205 Thiamine pyrophosphate enzyme, central domain AMD27_RS04000 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMD27_RS04010 PF04966 Carbohydrate-selective porin, OprB family AMD27_RS04015 PF01011 PQQ enzyme repeat AMD27_RS04020 PF07715 TonB-dependent Receptor Plug Domain AMD27_RS04020 PF00593 TonB dependent receptor AMD27_RS04040 PF00378 Enoyl-CoA hydratase/isomerase AMD27_RS04055 PF08448 PAS fold AMD27_RS04055 PF00990 Diguanylate cyclase, GGDEF domain AMD27_RS04060 PF01327 Polypeptide deformylase AMD27_RS04065 PF04960 Glutaminase AMD27_RS04075 PF02733 Dak1 domain AMD27_RS04085 PF02607 B12 binding domain AMD27_RS04085 PF02965 Vitamin B12 dependent methionine synthase, activation domain AMD27_RS04085 PF00809 Pterin binding enzyme AMD27_RS04085 PF02574 Homocysteine S-methyltransferase AMD27_RS04085 PF02310 B12 binding domain AMD27_RS04090 PF01384 Phosphate transporter family AMD27_RS04105 PF01106 NifU-like domain AMD27_RS04105 PF01521 Iron-sulphur cluster biosynthesis AMD27_RS04110 PF00593 TonB dependent receptor AMD27_RS04110 PF07715 TonB-dependent Receptor Plug Domain AMD27_RS04120 PF00561 alpha/beta hydrolase fold AMD27_RS04125 PF00484 Carbonic anhydrase AMD27_RS04130 PF13472 GDSL-like Lipase/Acylhydrolase family AMD27_RS04135 PF00005 ABC transporter AMD27_RS04150 PF00912 Transglycosylase AMD27_RS04155 PF02503 Polyphosphate kinase middle domain AMD27_RS04155 PF13089 Polyphosphate kinase N-terminal domain AMD27_RS04155 PF13090 Polyphosphate kinase C-terminal domain 2 AMD27_RS04155 PF17941 Polyphosphate kinase C-terminal domain 1 AMD27_RS04160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD27_RS04160 PF03466 LysR substrate binding domain AMD27_RS04165 PF00561 alpha/beta hydrolase fold AMD27_RS04170 PF18113 Rubredoxin binding C-terminal domain AMD27_RS04170 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD27_RS04175 PF00301 Rubredoxin AMD27_RS04180 PF00156 Phosphoribosyl transferase domain AMD27_RS04185 PF05728 Uncharacterised protein family (UPF0227) AMD27_RS04190 PF01336 OB-fold nucleic acid binding domain AMD27_RS04190 PF00152 tRNA synthetases class II (D, K and N) AMD27_RS04195 PF14052 Capsule assembly protein Wzi AMD27_RS04200 PF01507 Phosphoadenosine phosphosulfate reductase family AMD27_RS04205 PF00009 Elongation factor Tu GTP binding domain AMD27_RS04215 PF01048 Phosphorylase superfamily AMD27_RS04220 PF00107 Zinc-binding dehydrogenase AMD27_RS04220 PF00109 Beta-ketoacyl synthase, N-terminal domain AMD27_RS04220 PF00698 Acyl transferase domain AMD27_RS04220 PF08240 Alcohol dehydrogenase GroES-like domain AMD27_RS04220 PF16197 Ketoacyl-synthetase C-terminal extension AMD27_RS04220 PF02801 Beta-ketoacyl synthase, C-terminal domain AMD27_RS04220 PF08659 KR domain AMD27_RS04220 PF14765 Polyketide synthase dehydratase AMD27_RS04220 PF00550 Phosphopantetheine attachment site AMD27_RS04245 PF08264 Anticodon-binding domain of tRNA AMD27_RS04245 PF00133 tRNA synthetases class I (I, L, M and V) AMD27_RS04245 PF10458 Valyl tRNA synthetase tRNA binding arm AMD27_RS04255 PF00106 short chain dehydrogenase AMD27_RS04265 PF00106 short chain dehydrogenase AMD27_RS04270 PF01906 Putative heavy-metal-binding AMD27_RS04275 PF01906 Putative heavy-metal-binding AMD27_RS04280 PF02321 Outer membrane efflux protein AMD27_RS04285 PF00873 AcrB/AcrD/AcrF family AMD27_RS04290 PF00529 HlyD membrane-fusion protein of T1SS AMD27_RS04290 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMD27_RS04305 PF00348 Polyprenyl synthetase AMD27_RS04310 PF00829 Ribosomal prokaryotic L21 protein AMD27_RS04315 PF01016 Ribosomal L27 protein AMD27_RS04320 PF03548 Outer membrane lipoprotein carrier protein LolA AMD27_RS04330 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMD27_RS04330 PF02403 Seryl-tRNA synthetase N-terminal domain AMD27_RS04335 PF14824 Sirohaem biosynthesis protein central AMD27_RS04335 PF10414 Sirohaem synthase dimerisation region AMD27_RS04335 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMD27_RS04340 PF00588 SpoU rRNA Methylase family AMD27_RS04350 PF13520 Amino acid permease AMD27_RS04355 PF00465 Iron-containing alcohol dehydrogenase AMD27_RS04365 PF03099 Biotin/lipoate A/B protein ligase family AMD27_RS04425 PF04545 Sigma-70, region 4 AMD27_RS04425 PF04539 Sigma-70 region 3 AMD27_RS04425 PF04542 Sigma-70 region 2 AMD27_RS04425 PF00140 Sigma-70 factor, region 1.2 AMD27_RS04425 PF03979 Sigma-70 factor, region 1.1 AMD27_RS04425 PF04546 Sigma-70, non-essential region AMD27_RS04440 PF09335 SNARE associated Golgi protein AMD27_RS04450 PF17773 UPF0176 acylphosphatase like domain AMD27_RS04450 PF00581 Rhodanese-like domain AMD27_RS04460 PF02261 Aspartate decarboxylase AMD27_RS04465 PF01195 Peptidyl-tRNA hydrolase AMD27_RS04470 PF14693 Ribosomal protein TL5, C-terminal domain AMD27_RS04470 PF01386 Ribosomal L25p family AMD27_RS04475 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AMD27_RS04475 PF14572 Phosphoribosyl synthetase-associated domain AMD27_RS04500 PF00288 GHMP kinases N terminal domain AMD27_RS04500 PF08544 GHMP kinases C terminal AMD27_RS04505 PF03550 Outer membrane lipoprotein LolB AMD27_RS04515 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AMD27_RS04515 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AMD27_RS04515 PF01488 Shikimate / quinate 5-dehydrogenase AMD27_RS04520 PF08278 DNA primase DnaG DnaB-binding AMD27_RS04520 PF01807 CHC2 zinc finger AMD27_RS04520 PF10410 DnaB-helicase binding domain of primase AMD27_RS04520 PF08275 DNA primase catalytic core, N-terminal domain AMD27_RS04525 PF13525 Outer membrane lipoprotein AMD27_RS04530 PF01479 S4 domain AMD27_RS04530 PF00849 RNA pseudouridylate synthase AMD27_RS04535 PF02578 Multi-copper polyphenol oxidoreductase laccase AMD27_RS04540 PF03358 NADPH-dependent FMN reductase AMD27_RS04555 PF01668 SmpB protein AMD27_RS04560 PF01467 Cytidylyltransferase-like AMD27_RS04565 PF00037 4Fe-4S binding domain AMD27_RS04600 PF02540 NAD synthase AMD27_RS04600 PF00795 Carbon-nitrogen hydrolase AMD27_RS04615 PF00106 short chain dehydrogenase AMD27_RS04620 PF00743 Flavin-binding monooxygenase-like AMD27_RS04630 PF00854 POT family AMD27_RS04635 PF00285 Citrate synthase, C-terminal domain AMD27_RS04640 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AMD27_RS04645 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AMD27_RS04650 PF02910 Fumarate reductase flavoprotein C-term AMD27_RS04650 PF00890 FAD binding domain AMD27_RS04655 PF13085 2Fe-2S iron-sulfur cluster binding domain AMD27_RS04660 PF16078 2-oxoglutarate dehydrogenase N-terminus AMD27_RS04660 PF02779 Transketolase, pyrimidine binding domain AMD27_RS04660 PF16870 2-oxoglutarate dehydrogenase C-terminal AMD27_RS04660 PF00676 Dehydrogenase E1 component AMD27_RS04665 PF00364 Biotin-requiring enzyme AMD27_RS04665 PF02817 e3 binding domain AMD27_RS04665 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMD27_RS04670 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD27_RS04670 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMD27_RS04675 PF08442 ATP-grasp domain AMD27_RS04675 PF00549 CoA-ligase AMD27_RS04680 PF02629 CoA binding domain AMD27_RS04680 PF00549 CoA-ligase AMD27_RS04705 PF00905 Penicillin binding protein transpeptidase domain AMD27_RS04705 PF03717 Penicillin-binding Protein dimerisation domain AMD27_RS04720 PF05191 Adenylate kinase, active site lid AMD27_RS04725 PF00730 HhH-GPD superfamily base excision DNA repair protein AMD27_RS04725 PF00633 Helix-hairpin-helix motif AMD27_RS04725 PF10576 Iron-sulfur binding domain of endonuclease III AMD27_RS04730 PF04060 Putative Fe-S cluster AMD27_RS04735 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AMD27_RS04735 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AMD27_RS04745 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AMD27_RS04750 PF02590 Predicted SPOUT methyltransferase AMD27_RS04765 PF05362 Lon protease (S16) C-terminal proteolytic domain AMD27_RS04765 PF00004 ATPase family associated with various cellular activities (AAA) AMD27_RS04765 PF02190 ATP-dependent protease La (LON) substrate-binding domain AMD27_RS04770 PF01812 5-formyltetrahydrofolate cyclo-ligase family AMD27_RS04775 PF00376 MerR family regulatory protein AMD27_RS04775 PF09278 MerR, DNA binding AMD27_RS04790 PF07690 Major Facilitator Superfamily AMD27_RS04800 PF08267 Cobalamin-independent synthase, N-terminal domain AMD27_RS04800 PF01717 Cobalamin-independent synthase, Catalytic domain AMD27_RS04805 PF01613 Flavin reductase like domain AMD27_RS04835 PF03695 Uncharacterised protein family (UPF0149) AMD27_RS04840 PF05195 Aminopeptidase P, N-terminal domain AMD27_RS04840 PF00557 Metallopeptidase family M24 AMD27_RS04845 PF00512 His Kinase A (phospho-acceptor) domain AMD27_RS04845 PF00672 HAMP domain AMD27_RS04845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD27_RS04850 PF00486 Transcriptional regulatory protein, C terminal AMD27_RS04850 PF00072 Response regulator receiver domain AMD27_RS04875 PF01494 FAD binding domain AMD27_RS04880 PF01494 FAD binding domain AMD27_RS04890 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMD27_RS04900 PF02021 Uncharacterised protein family UPF0102 AMD27_RS04905 PF04972 BON domain AMD27_RS04915 PF00293 NUDIX domain AMD27_RS04915 PF09297 NADH pyrophosphatase zinc ribbon domain AMD27_RS04915 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain AMD27_RS04925 PF00929 Exonuclease AMD27_RS04930 PF01464 Transglycosylase SLT domain AMD27_RS04930 PF01476 LysM domain AMD27_RS04930 PF01476 LysM domain AMD27_RS04930 PF01464 Transglycosylase SLT domain AMD27_RS04935 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMD27_RS04940 PF00528 Binding-protein-dependent transport system inner membrane component AMD27_RS04945 PF12911 N-terminal TM domain of oligopeptide transport permease C AMD27_RS04945 PF00528 Binding-protein-dependent transport system inner membrane component AMD27_RS04950 PF00005 ABC transporter AMD27_RS04950 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMD27_RS04955 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD27_RS04955 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMD27_RS04960 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family AMD27_RS04985 PF00324 Amino acid permease AMD27_RS04995 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AMD27_RS05015 PF02687 FtsX-like permease family AMD27_RS05015 PF12704 MacB-like periplasmic core domain AMD27_RS05020 PF00005 ABC transporter AMD27_RS05025 PF13340 Putative transposase of IS4/5 family (DUF4096) AMD27_RS05045 PF13737 Transposase DDE domain AMD27_RS05065 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) AMD27_RS05065 PF04717 Type VI secretion system, phage-baseplate injector AMD27_RS05065 PF13296 Putative type VI secretion system Rhs element Vgr AMD27_RS05070 PF13567 Domain of unknown function (DUF4131) AMD27_RS05070 PF03772 Competence protein AMD27_RS05070 PF00753 Metallo-beta-lactamase superfamily AMD27_RS05080 PF01343 Peptidase family S49 AMD27_RS05080 PF06965 Na+/H+ antiporter 1 AMD27_RS05090 PF00551 Formyl transferase AMD27_RS05095 PF02769 AIR synthase related protein, C-terminal domain AMD27_RS05095 PF00586 AIR synthase related protein, N-terminal domain AMD27_RS05100 PF01594 AI-2E family transporter AMD27_RS05105 PF00308 Bacterial dnaA protein AMD27_RS05105 PF08299 Bacterial dnaA protein helix-turn-helix AMD27_RS05105 PF11638 DnaA N-terminal domain AMD27_RS05125 PF05816 Toxic anion resistance protein (TelA) AMD27_RS05140 PF00109 Beta-ketoacyl synthase, N-terminal domain AMD27_RS05140 PF16197 Ketoacyl-synthetase C-terminal extension AMD27_RS05140 PF14765 Polyketide synthase dehydratase AMD27_RS05140 PF00550 Phosphopantetheine attachment site AMD27_RS05140 PF08659 KR domain AMD27_RS05140 PF00698 Acyl transferase domain AMD27_RS05140 PF02801 Beta-ketoacyl synthase, C-terminal domain AMD27_RS05140 PF08240 Alcohol dehydrogenase GroES-like domain AMD27_RS05145 PF13192 Thioredoxin domain AMD27_RS05145 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD27_RS05150 PF02525 Flavodoxin-like fold AMD27_RS05155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD27_RS05155 PF03466 LysR substrate binding domain AMD27_RS05165 PF00037 4Fe-4S binding domain AMD27_RS05170 PF01136 Peptidase family U32 AMD27_RS05170 PF16325 Peptidase family U32 C-terminal domain AMD27_RS05185 PF13411 MerR HTH family regulatory protein AMD27_RS05200 PF00175 Oxidoreductase NAD-binding domain AMD27_RS05200 PF00970 Oxidoreductase FAD-binding domain AMD27_RS05205 PF18389 TrmO C-terminal domain AMD27_RS05205 PF01980 tRNA-methyltransferase O AMD27_RS05210 PF00437 Type II/IV secretion system protein AMD27_RS05210 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AMD27_RS05220 PF00486 Transcriptional regulatory protein, C terminal AMD27_RS05220 PF00072 Response regulator receiver domain AMD27_RS05225 PF08521 Two-component sensor kinase N-terminal AMD27_RS05225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD27_RS05225 PF00512 His Kinase A (phospho-acceptor) domain AMD27_RS05245 PF00912 Transglycosylase AMD27_RS05245 PF00905 Penicillin binding protein transpeptidase domain AMD27_RS05245 PF14814 Bifunctional transglycosylase second domain AMD27_RS05250 PF01513 ATP-NAD kinase AMD27_RS05255 PF07023 Protein of unknown function (DUF1315) AMD27_RS05260 PF02885 Glycosyl transferase family, helical bundle domain AMD27_RS05260 PF00591 Glycosyl transferase family, a/b domain AMD27_RS05265 PF02770 Acyl-CoA dehydrogenase, middle domain AMD27_RS05265 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD27_RS05265 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD27_RS05275 PF01817 Chorismate mutase type II AMD27_RS05275 PF01842 ACT domain AMD27_RS05275 PF00800 Prephenate dehydratase AMD27_RS05280 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AMD27_RS05300 PF03883 Peroxide stress protein YaaA AMD27_RS05320 PF03441 FAD binding domain of DNA photolyase AMD27_RS05320 PF00875 DNA photolyase AMD27_RS05325 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMD27_RS05330 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD27_RS05335 PF00768 D-alanyl-D-alanine carboxypeptidase AMD27_RS05335 PF07943 Penicillin-binding protein 5, C-terminal domain AMD27_RS05345 PF00849 RNA pseudouridylate synthase AMD27_RS05380 PF02567 Phenazine biosynthesis-like protein AMD27_RS05385 PF05193 Peptidase M16 inactive domain AMD27_RS05385 PF00675 Insulinase (Peptidase family M16) AMD27_RS05405 PF00005 ABC transporter AMD27_RS05405 PF00664 ABC transporter transmembrane region AMD27_RS05410 PF07690 Major Facilitator Superfamily AMD27_RS05415 PF00440 Bacterial regulatory proteins, tetR family AMD27_RS05430 PF13737 Transposase DDE domain AMD27_RS05470 PF05973 Phage derived protein Gp49-like (DUF891) AMD27_RS05475 PF01381 Helix-turn-helix AMD27_RS05480 PF00857 Isochorismatase family AMD27_RS05485 PF12706 Beta-lactamase superfamily domain AMD27_RS05490 PF01965 DJ-1/PfpI family AMD27_RS05495 PF02581 Thiamine monophosphate synthase AMD27_RS05500 PF00202 Aminotransferase class-III AMD27_RS05510 PF00849 RNA pseudouridylate synthase AMD27_RS05515 PF12137 RNA polymerase recycling family C-terminal AMD27_RS05515 PF18337 RapA N-terminal Tudor like domain AMD27_RS05515 PF00176 SNF2 family N-terminal domain AMD27_RS05515 PF18339 RapA N-terminal Tudor like domain 1 AMD27_RS05515 PF00271 Helicase conserved C-terminal domain AMD27_RS05520 PF00155 Aminotransferase class I and II AMD27_RS05520 PF00392 Bacterial regulatory proteins, gntR family AMD27_RS05525 PF00892 EamA-like transporter family AMD27_RS05530 PF00378 Enoyl-CoA hydratase/isomerase AMD27_RS05535 PF00501 AMP-binding enzyme AMD27_RS05540 PF00440 Bacterial regulatory proteins, tetR family AMD27_RS05545 PF00970 Oxidoreductase FAD-binding domain AMD27_RS05545 PF00111 2Fe-2S iron-sulfur cluster binding domain AMD27_RS05545 PF00175 Oxidoreductase NAD-binding domain AMD27_RS05550 PF00487 Fatty acid desaturase AMD27_RS05555 PF01925 Sulfite exporter TauE/SafE AMD27_RS05565 PF00202 Aminotransferase class-III AMD27_RS05570 PF00282 Pyridoxal-dependent decarboxylase conserved domain AMD27_RS05580 PF00528 Binding-protein-dependent transport system inner membrane component AMD27_RS05585 PF00528 Binding-protein-dependent transport system inner membrane component AMD27_RS05590 PF00005 ABC transporter AMD27_RS05595 PF13737 Transposase DDE domain AMD27_RS05600 PF07690 Major Facilitator Superfamily AMD27_RS05610 PF03060 Nitronate monooxygenase AMD27_RS05625 PF13613 Helix-turn-helix of DDE superfamily endonuclease AMD27_RS05625 PF13359 DDE superfamily endonuclease AMD27_RS05635 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD27_RS05635 PF02770 Acyl-CoA dehydrogenase, middle domain AMD27_RS05635 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD27_RS05655 PF00285 Citrate synthase, C-terminal domain AMD27_RS05660 PF00158 Sigma-54 interaction domain AMD27_RS05660 PF06506 Propionate catabolism activator AMD27_RS05660 PF02954 Bacterial regulatory protein, Fis family AMD27_RS05665 PF02515 CoA-transferase family III AMD27_RS05670 PF00682 HMGL-like AMD27_RS05700 PF00196 Bacterial regulatory proteins, luxR family AMD27_RS05700 PF17874 MalT-like TPR region AMD27_RS05705 PF00378 Enoyl-CoA hydratase/isomerase AMD27_RS05710 PF13193 AMP-binding enzyme C-terminal domain AMD27_RS05710 PF00501 AMP-binding enzyme AMD27_RS05715 PF00378 Enoyl-CoA hydratase/isomerase AMD27_RS05720 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AMD27_RS05720 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AMD27_RS05720 PF00378 Enoyl-CoA hydratase/isomerase AMD27_RS05725 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AMD27_RS05725 PF02769 AIR synthase related protein, C-terminal domain AMD27_RS05725 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AMD27_RS05735 PF01784 NIF3 (NGG1p interacting factor 3) AMD27_RS05740 PF00881 Nitroreductase family AMD27_RS05750 PF00293 NUDIX domain AMD27_RS05750 PF01467 Cytidylyltransferase-like AMD27_RS05755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD27_RS05755 PF03466 LysR substrate binding domain AMD27_RS05760 PF01810 LysE type translocator AMD27_RS05765 PF00578 AhpC/TSA family AMD27_RS05775 PF06508 Queuosine biosynthesis protein QueC AMD27_RS05780 PF04055 Radical SAM superfamily AMD27_RS05785 PF14602 Hexapeptide repeat of succinyl-transferase AMD27_RS05785 PF00132 Bacterial transferase hexapeptide (six repeats) AMD27_RS05785 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AMD27_RS05795 PF03466 LysR substrate binding domain AMD27_RS05795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD27_RS05800 PF00005 ABC transporter AMD27_RS05800 PF12857 TOBE-like domain AMD27_RS05805 PF00528 Binding-protein-dependent transport system inner membrane component AMD27_RS05810 PF00528 Binding-protein-dependent transport system inner membrane component AMD27_RS05830 PF02618 YceG-like family AMD27_RS05835 PF02223 Thymidylate kinase AMD27_RS05845 PF00890 FAD binding domain AMD27_RS05845 PF02910 Fumarate reductase flavoprotein C-term AMD27_RS05850 PF13180 PDZ domain AMD27_RS05850 PF17820 PDZ domain AMD27_RS05875 PF10415 Fumarase C C-terminus AMD27_RS05875 PF00206 Lyase AMD27_RS05880 PF03466 LysR substrate binding domain AMD27_RS05880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD27_RS05885 PF00375 Sodium:dicarboxylate symporter family AMD27_RS05890 PF13737 Transposase DDE domain AMD27_RS05895 PF00679 Elongation factor G C-terminus AMD27_RS05895 PF06421 GTP-binding protein LepA C-terminus AMD27_RS05895 PF03144 Elongation factor Tu domain 2 AMD27_RS05895 PF00009 Elongation factor Tu GTP binding domain AMD27_RS05900 PF10502 Signal peptidase, peptidase S26 AMD27_RS05910 PF00035 Double-stranded RNA binding motif AMD27_RS05910 PF14622 Ribonuclease-III-like AMD27_RS05915 PF07650 KH domain AMD27_RS05915 PF01926 50S ribosome-binding GTPase AMD27_RS05925 PF02565 Recombination protein O C terminal AMD27_RS05925 PF11967 Recombination protein O N terminal AMD27_RS05930 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AMD27_RS05935 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) AMD27_RS05960 PF01638 HxlR-like helix-turn-helix AMD27_RS05965 PF00155 Aminotransferase class I and II AMD27_RS05980 PF13340 Putative transposase of IS4/5 family (DUF4096) AMD27_RS05985 PF01207 Dihydrouridine synthase (Dus) AMD27_RS05990 PF03060 Nitronate monooxygenase AMD27_RS06005 PF00375 Sodium:dicarboxylate symporter family AMD27_RS06010 PF04143 Sulphur transport AMD27_RS06025 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD27_RS06025 PF13192 Thioredoxin domain AMD27_RS06050 PF00578 AhpC/TSA family AMD27_RS06050 PF10417 C-terminal domain of 1-Cys peroxiredoxin AMD27_RS06055 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AMD27_RS06055 PF00271 Helicase conserved C-terminal domain AMD27_RS06055 PF04408 Helicase associated domain (HA2) AMD27_RS06055 PF11898 Domain of unknown function (DUF3418) AMD27_RS06055 PF00270 DEAD/DEAH box helicase AMD27_RS06060 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMD27_RS06060 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMD27_RS06070 PF02678 Pirin AMD27_RS06070 PF05726 Pirin C-terminal cupin domain AMD27_RS06085 PF09190 DALR domain AMD27_RS06085 PF01406 tRNA synthetases class I (C) catalytic domain AMD27_RS06095 PF00571 CBS domain AMD27_RS06095 PF01380 SIS domain AMD27_RS06110 PF03968 OstA-like protein AMD27_RS06115 PF12399 Branched-chain amino acid ATP-binding cassette transporter AMD27_RS06115 PF00005 ABC transporter AMD27_RS06125 PF00005 ABC transporter AMD27_RS06125 PF00664 ABC transporter transmembrane region AMD27_RS06145 PF01205 Uncharacterized protein family UPF0029 AMD27_RS06160 PF01596 O-methyltransferase AMD27_RS06170 PF00037 4Fe-4S binding domain AMD27_RS06170 PF11953 Domain of unknown function (DUF3470) AMD27_RS06190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD27_RS06190 PF03466 LysR substrate binding domain AMD27_RS06200 PF01810 LysE type translocator AMD27_RS06210 PF04820 Tryptophan halogenase AMD27_RS06215 PF01810 LysE type translocator AMD27_RS06230 PF05192 MutS domain III AMD27_RS06230 PF01624 MutS domain I AMD27_RS06230 PF05190 MutS family domain IV AMD27_RS06230 PF00488 MutS domain V AMD27_RS06230 PF05188 MutS domain II AMD27_RS06295 PF05930 Prophage CP4-57 regulatory protein (AlpA) AMD27_RS06330 PF13361 UvrD-like helicase C-terminal domain AMD27_RS06330 PF12462 DNA helicase IV / RNA helicase N terminal AMD27_RS06330 PF00580 UvrD/REP helicase N-terminal domain AMD27_RS06340 PF02601 Exonuclease VII, large subunit AMD27_RS06340 PF13742 OB-fold nucleic acid binding domain AMD27_RS06355 PF04717 Type VI secretion system, phage-baseplate injector AMD27_RS06355 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) AMD27_RS06355 PF13296 Putative type VI secretion system Rhs element Vgr AMD27_RS06360 PF03527 RHS protein AMD27_RS06360 PF05593 RHS Repeat AMD27_RS06380 PF13613 Helix-turn-helix of DDE superfamily endonuclease AMD27_RS06380 PF13359 DDE superfamily endonuclease AMD27_RS06385 PF02673 Bacitracin resistance protein BacA AMD27_RS06390 PF03814 Potassium-transporting ATPase A subunit AMD27_RS06400 PF02669 K+-transporting ATPase, c chain AMD27_RS06405 PF00512 His Kinase A (phospho-acceptor) domain AMD27_RS06405 PF02702 Osmosensitive K+ channel His kinase sensor domain AMD27_RS06405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD27_RS06405 PF13493 Domain of unknown function (DUF4118) AMD27_RS06405 PF13492 GAF domain AMD27_RS06410 PF00072 Response regulator receiver domain AMD27_RS06410 PF00486 Transcriptional regulatory protein, C terminal AMD27_RS06435 PF00132 Bacterial transferase hexapeptide (six repeats) AMD27_RS06440 PF00588 SpoU rRNA Methylase family AMD27_RS06445 PF01336 OB-fold nucleic acid binding domain AMD27_RS06445 PF14579 Helix-hairpin-helix motif AMD27_RS06445 PF07733 Bacterial DNA polymerase III alpha NTPase domain AMD27_RS06445 PF02811 PHP domain AMD27_RS06445 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AMD27_RS06455 PF17763 Glutaminase/Asparaginase C-terminal domain AMD27_RS06455 PF00710 Asparaginase, N-terminal AMD27_RS06460 PF00155 Aminotransferase class I and II AMD27_RS06465 PF01641 SelR domain AMD27_RS06470 PF00255 Glutathione peroxidase AMD27_RS06475 PF03956 Lysine exporter LysO AMD27_RS06480 PF00743 Flavin-binding monooxygenase-like AMD27_RS06490 PF03969 AFG1-like ATPase AMD27_RS06495 PF13340 Putative transposase of IS4/5 family (DUF4096) AMD27_RS06500 PF00990 Diguanylate cyclase, GGDEF domain AMD27_RS06515 PF00271 Helicase conserved C-terminal domain AMD27_RS06515 PF04851 Type III restriction enzyme, res subunit AMD27_RS06515 PF17757 UvrB interaction domain AMD27_RS06515 PF02151 UvrB/uvrC motif AMD27_RS06515 PF12344 Ultra-violet resistance protein B AMD27_RS06520 PF08212 Lipocalin-like domain AMD27_RS06530 PF13737 Transposase DDE domain AMD27_RS06535 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AMD27_RS06535 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMD27_RS06555 PF05368 NmrA-like family AMD27_RS06560 PF01638 HxlR-like helix-turn-helix AMD27_RS06565 PF02567 Phenazine biosynthesis-like protein AMD27_RS06570 PF01926 50S ribosome-binding GTPase AMD27_RS06570 PF01018 GTP1/OBG AMD27_RS06575 PF01472 PUA domain AMD27_RS06575 PF00696 Amino acid kinase family AMD27_RS06585 PF07759 Protein of unknown function (DUF1615) AMD27_RS06600 PF03796 DnaB-like helicase C terminal domain AMD27_RS06600 PF00772 DnaB-like helicase N terminal domain AMD27_RS06605 PF03948 Ribosomal protein L9, C-terminal domain AMD27_RS06605 PF01281 Ribosomal protein L9, N-terminal domain AMD27_RS06610 PF01084 Ribosomal protein S18 AMD27_RS06615 PF01250 Ribosomal protein S6 AMD27_RS06620 PF01040 UbiA prenyltransferase family AMD27_RS06625 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AMD27_RS06630 PF00510 Cytochrome c oxidase subunit III AMD27_RS06635 PF00115 Cytochrome C and Quinol oxidase polypeptide I AMD27_RS06640 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AMD27_RS06640 PF06481 COX Aromatic Rich Motif AMD27_RS06650 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AMD27_RS06650 PF02896 PEP-utilising enzyme, TIM barrel domain AMD27_RS06650 PF00391 PEP-utilising enzyme, mobile domain AMD27_RS06655 PF03618 Kinase/pyrophosphorylase AMD27_RS06685 PF13932 GidA associated domain AMD27_RS06685 PF01134 Glucose inhibited division protein A AMD27_RS06695 PF14403 Circularly permuted ATP-grasp type 2 AMD27_RS06705 PF01841 Transglutaminase-like superfamily AMD27_RS06705 PF08379 Bacterial transglutaminase-like N-terminal region AMD27_RS06720 PF01168 Alanine racemase, N-terminal domain AMD27_RS06720 PF00842 Alanine racemase, C-terminal domain AMD27_RS06725 PF13340 Putative transposase of IS4/5 family (DUF4096) AMD27_RS06730 PF01274 Malate synthase AMD27_RS06735 PF00171 Aldehyde dehydrogenase family AMD27_RS06900 PF06381 Protein of unknown function (DUF1073) AMD27_RS06905 PF04233 Phage Mu protein F like protein AMD27_RS07020 PF00959 Phage lysozyme AMD27_RS07065 PF13356 Arm DNA-binding domain AMD27_RS07065 PF00589 Phage integrase family AMD27_RS07080 PF03741 Integral membrane protein TerC family AMD27_RS07080 PF03471 Transporter associated domain AMD27_RS07100 PF05525 Branched-chain amino acid transport protein AMD27_RS07105 PF00557 Metallopeptidase family M24 AMD27_RS07110 PF03594 Benzoate membrane transport protein AMD27_RS07120 PF00923 Transaldolase/Fructose-6-phosphate aldolase AMD27_RS07120 PF13202 EF hand AMD27_RS07125 PF03466 LysR substrate binding domain AMD27_RS07125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD27_RS07140 PF00108 Thiolase, N-terminal domain AMD27_RS07140 PF02803 Thiolase, C-terminal domain AMD27_RS07175 PF12170 DNA polymerase III tau subunit V interacting with alpha AMD27_RS07175 PF12169 DNA polymerase III subunits gamma and tau domain III AMD27_RS07175 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AMD27_RS07180 PF03061 Thioesterase superfamily AMD27_RS07185 PF00465 Iron-containing alcohol dehydrogenase AMD27_RS07190 PF01451 Low molecular weight phosphotyrosine protein phosphatase AMD27_RS07195 PF01565 FAD binding domain AMD27_RS07195 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AMD27_RS07210 PF01645 Conserved region in glutamate synthase AMD27_RS07215 PF08007 Cupin superfamily protein AMD27_RS07225 PF02545 Maf-like protein AMD27_RS07235 PF00162 Phosphoglycerate kinase AMD27_RS07245 PF01116 Fructose-bisphosphate aldolase class-II AMD27_RS07265 PF02542 YgbB family AMD27_RS07275 PF00793 DAHP synthetase I family AMD27_RS07280 PF01925 Sulfite exporter TauE/SafE AMD27_RS07285 PF02684 Lipid-A-disaccharide synthetase AMD27_RS07305 PF02872 5'-nucleotidase, C-terminal domain AMD27_RS07305 PF00149 Calcineurin-like phosphoesterase AMD27_RS07335 PF07690 Major Facilitator Superfamily AMD27_RS07340 PF01464 Transglycosylase SLT domain AMD27_RS07340 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain AMD27_RS07360 PF00782 Dual specificity phosphatase, catalytic domain AMD27_RS07365 PF12147 Putative methyltransferase AMD27_RS07365 PF12146 Serine aminopeptidase, S33 AMD27_RS07370 PF01066 CDP-alcohol phosphatidyltransferase AMD27_RS07385 PF04073 Aminoacyl-tRNA editing domain AMD27_RS07390 PF13089 Polyphosphate kinase N-terminal domain AMD27_RS07390 PF17941 Polyphosphate kinase C-terminal domain 1 AMD27_RS07390 PF13090 Polyphosphate kinase C-terminal domain 2 AMD27_RS07390 PF02503 Polyphosphate kinase middle domain AMD27_RS07400 PF01230 HIT domain AMD27_RS07410 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMD27_RS07410 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AMD27_RS07420 PF01053 Cys/Met metabolism PLP-dependent enzyme AMD27_RS07425 PF02575 YbaB/EbfC DNA-binding family AMD27_RS07430 PF13662 Toprim domain AMD27_RS07430 PF02132 RecR protein AMD27_RS07435 PF01612 3'-5' exonuclease AMD27_RS07435 PF00570 HRDC domain AMD27_RS07440 PF05166 YcgL domain AMD27_RS07450 PF17862 AAA+ lid domain AMD27_RS07450 PF01434 Peptidase family M41 AMD27_RS07450 PF00004 ATPase family associated with various cellular activities (AAA) AMD27_RS07465 PF00571 CBS domain AMD27_RS07495 PF05193 Peptidase M16 inactive domain AMD27_RS07495 PF00675 Insulinase (Peptidase family M16) AMD27_RS07500 PF00448 SRP54-type protein, GTPase domain AMD27_RS07500 PF02881 SRP54-type protein, helical bundle domain AMD27_RS07525 PF08173 Membrane bound YbgT-like protein AMD27_RS07530 PF02322 Cytochrome bd terminal oxidase subunit II AMD27_RS07535 PF01654 Cytochrome bd terminal oxidase subunit I AMD27_RS07545 PF07290 Protein of unknown function (DUF1449) AMD27_RS07555 PF00294 pfkB family carbohydrate kinase AMD27_RS07560 PF05193 Peptidase M16 inactive domain AMD27_RS07560 PF00675 Insulinase (Peptidase family M16) AMD27_RS07560 PF08367 Peptidase M16C associated AMD27_RS07565 PF02253 Phospholipase A1 AMD27_RS07580 PF11412 Disulphide bond corrector protein DsbC AMD27_RS07580 PF02683 Cytochrome C biogenesis protein transmembrane region AMD27_RS07595 PF02667 Short chain fatty acid transporter AMD27_RS07600 PF01144 Coenzyme A transferase AMD27_RS07605 PF01144 Coenzyme A transferase AMD27_RS07610 PF00682 HMGL-like AMD27_RS07615 PF00364 Biotin-requiring enzyme AMD27_RS07615 PF18140 Propionyl-coenzyme A carboxylase BT domain AMD27_RS07615 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMD27_RS07615 PF00289 Biotin carboxylase, N-terminal domain AMD27_RS07615 PF02785 Biotin carboxylase C-terminal domain AMD27_RS07620 PF00378 Enoyl-CoA hydratase/isomerase AMD27_RS07625 PF01039 Carboxyl transferase domain AMD27_RS07630 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD27_RS07630 PF02770 Acyl-CoA dehydrogenase, middle domain AMD27_RS07630 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD27_RS07635 PF00440 Bacterial regulatory proteins, tetR family AMD27_RS07640 PF13193 AMP-binding enzyme C-terminal domain AMD27_RS07640 PF00501 AMP-binding enzyme AMD27_RS07650 PF00291 Pyridoxal-phosphate dependent enzyme AMD27_RS07655 PF00501 AMP-binding enzyme AMD27_RS07655 PF13193 AMP-binding enzyme C-terminal domain AMD27_RS07665 PF08521 Two-component sensor kinase N-terminal AMD27_RS07665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD27_RS07665 PF00512 His Kinase A (phospho-acceptor) domain AMD27_RS07670 PF00486 Transcriptional regulatory protein, C terminal AMD27_RS07670 PF00072 Response regulator receiver domain AMD27_RS07675 PF08019 Phosphoethanolamine transferase EptA/EptB AMD27_RS07675 PF00884 Sulfatase AMD27_RS07705 PF18011 C-terminal domain found in long catalases AMD27_RS07705 PF00199 Catalase AMD27_RS07705 PF06628 Catalase-related immune-responsive AMD27_RS07720 PF05401 Nodulation protein S (NodS) AMD27_RS07730 PF07690 Major Facilitator Superfamily AMD27_RS07735 PF00982 Glycosyltransferase family 20 AMD27_RS07740 PF02358 Trehalose-phosphatase AMD27_RS07745 PF00005 ABC transporter AMD27_RS07755 PF07690 Major Facilitator Superfamily AMD27_RS07760 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD27_RS07760 PF04324 BFD-like [2Fe-2S] binding domain AMD27_RS07760 PF18267 Rubredoxin NAD+ reductase C-terminal domain AMD27_RS07760 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AMD27_RS07760 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AMD27_RS07765 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AMD27_RS07765 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD27_RS07765 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AMD27_RS07765 PF18267 Rubredoxin NAD+ reductase C-terminal domain AMD27_RS07765 PF04324 BFD-like [2Fe-2S] binding domain AMD27_RS07770 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AMD27_RS07770 PF01568 Molydopterin dinucleotide binding domain AMD27_RS07770 PF00384 Molybdopterin oxidoreductase AMD27_RS07770 PF04324 BFD-like [2Fe-2S] binding domain AMD27_RS07775 PF12804 MobA-like NTP transferase domain AMD27_RS07780 PF06463 Molybdenum Cofactor Synthesis C AMD27_RS07780 PF04055 Radical SAM superfamily AMD27_RS07790 PF02391 MoaE protein AMD27_RS07795 PF00994 Probable molybdopterin binding domain AMD27_RS07795 PF01967 MoaC family AMD27_RS07800 PF03454 MoeA C-terminal region (domain IV) AMD27_RS07800 PF00994 Probable molybdopterin binding domain AMD27_RS07800 PF03453 MoeA N-terminal region (domain I and II) AMD27_RS07810 PF00528 Binding-protein-dependent transport system inner membrane component AMD27_RS07815 PF03459 TOBE domain AMD27_RS07815 PF00005 ABC transporter AMD27_RS07820 PF12146 Serine aminopeptidase, S33 AMD27_RS07825 PF00108 Thiolase, N-terminal domain AMD27_RS07825 PF02803 Thiolase, C-terminal domain AMD27_RS07830 PF01144 Coenzyme A transferase AMD27_RS07835 PF01144 Coenzyme A transferase AMD27_RS07840 PF03594 Benzoate membrane transport protein AMD27_RS07845 PF00106 short chain dehydrogenase AMD27_RS07850 PF00970 Oxidoreductase FAD-binding domain AMD27_RS07850 PF00111 2Fe-2S iron-sulfur cluster binding domain AMD27_RS07850 PF00175 Oxidoreductase NAD-binding domain AMD27_RS07855 PF00866 Ring hydroxylating beta subunit AMD27_RS07860 PF00355 Rieske [2Fe-2S] domain AMD27_RS07860 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AMD27_RS07865 PF04444 Catechol dioxygenase N terminus AMD27_RS07865 PF00775 Dioxygenase AMD27_RS07870 PF02426 Muconolactone delta-isomerase AMD27_RS07875 PF13378 Enolase C-terminal domain-like AMD27_RS07875 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMD27_RS07880 PF03466 LysR substrate binding domain AMD27_RS07880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD27_RS07900 PF00324 Amino acid permease AMD27_RS07905 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding AMD27_RS07905 PF18381 YcaO cyclodehydratase C-terminal domain AMD27_RS07920 PF08450 SMP-30/Gluconolactonase/LRE-like region AMD27_RS07930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD27_RS07930 PF03466 LysR substrate binding domain AMD27_RS07945 PF03358 NADPH-dependent FMN reductase AMD27_RS07950 PF01758 Sodium Bile acid symporter family AMD27_RS07960 PF01022 Bacterial regulatory protein, arsR family AMD27_RS07965 PF03960 ArsC family AMD27_RS07970 PF02661 Fic/DOC family AMD27_RS07995 PF13737 Transposase DDE domain AMD27_RS08010 PF00916 Sulfate permease family AMD27_RS08010 PF01740 STAS domain AMD27_RS08015 PF00375 Sodium:dicarboxylate symporter family AMD27_RS08020 PF06912 Protein of unknown function (DUF1275) AMD27_RS08025 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) AMD27_RS08030 PF00924 Mechanosensitive ion channel AMD27_RS08035 PF00664 ABC transporter transmembrane region AMD27_RS08035 PF00005 ABC transporter AMD27_RS08045 PF02311 AraC-like ligand binding domain AMD27_RS08045 PF12833 Helix-turn-helix domain AMD27_RS08050 PF01597 Glycine cleavage H-protein AMD27_RS08055 PF13737 Transposase DDE domain AMD27_RS08090 PF00793 DAHP synthetase I family AMD27_RS08095 PF00563 EAL domain AMD27_RS08095 PF03707 Bacterial signalling protein N terminal repeat AMD27_RS08095 PF00990 Diguanylate cyclase, GGDEF domain AMD27_RS08100 PF12697 Alpha/beta hydrolase family AMD27_RS08105 PF00155 Aminotransferase class I and II AMD27_RS08110 PF08240 Alcohol dehydrogenase GroES-like domain AMD27_RS08110 PF00107 Zinc-binding dehydrogenase AMD27_RS08115 PF13091 PLD-like domain AMD27_RS08140 PF00106 short chain dehydrogenase AMD27_RS08160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD27_RS08160 PF03466 LysR substrate binding domain AMD27_RS08165 PF00565 Staphylococcal nuclease homologue AMD27_RS08175 PF07690 Major Facilitator Superfamily AMD27_RS08195 PF00206 Lyase AMD27_RS08195 PF10415 Fumarase C C-terminus AMD27_RS08200 PF16363 GDP-mannose 4,6 dehydratase AMD27_RS08205 PF00199 Catalase AMD27_RS08220 PF02342 TerD domain AMD27_RS08410 PF13742 OB-fold nucleic acid binding domain AMD27_RS08410 PF02601 Exonuclease VII, large subunit AMD27_RS08420 PF00293 NUDIX domain AMD27_RS08485 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT AMD27_RS08490 PF01726 LexA DNA binding domain AMD27_RS08490 PF00717 Peptidase S24-like AMD27_RS08545 PF00589 Phage integrase family AMD27_RS08550 PF02635 DsrE/DsrF-like family AMD27_RS08580 PF00717 Peptidase S24-like AMD27_RS08585 PF11799 impB/mucB/samB family C-terminal domain AMD27_RS08585 PF00817 impB/mucB/samB family AMD27_RS08585 PF13438 Domain of unknown function (DUF4113) AMD27_RS08590 PF01220 Dehydroquinase class II AMD27_RS08595 PF00364 Biotin-requiring enzyme AMD27_RS08600 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMD27_RS08600 PF02785 Biotin carboxylase C-terminal domain AMD27_RS08600 PF00289 Biotin carboxylase, N-terminal domain AMD27_RS08610 PF07694 5TMR of 5TMR-LYT AMD27_RS08610 PF00990 Diguanylate cyclase, GGDEF domain AMD27_RS08615 PF12832 MFS_1 like family AMD27_RS08630 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) AMD27_RS08630 PF04717 Type VI secretion system, phage-baseplate injector AMD27_RS08630 PF13296 Putative type VI secretion system Rhs element Vgr AMD27_RS08635 PF13613 Helix-turn-helix of DDE superfamily endonuclease AMD27_RS08635 PF13359 DDE superfamily endonuclease AMD27_RS08640 PF13613 Helix-turn-helix of DDE superfamily endonuclease AMD27_RS08640 PF13359 DDE superfamily endonuclease AMD27_RS08650 PF00582 Universal stress protein family AMD27_RS08670 PF01264 Chorismate synthase AMD27_RS08675 PF05175 Methyltransferase small domain AMD27_RS08680 PF00313 'Cold-shock' DNA-binding domain AMD27_RS08690 PF03109 ABC1 family AMD27_RS08695 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD27_RS08695 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD27_RS08695 PF02770 Acyl-CoA dehydrogenase, middle domain AMD27_RS08700 PF02770 Acyl-CoA dehydrogenase, middle domain AMD27_RS08700 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD27_RS08700 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD27_RS08705 PF00583 Acetyltransferase (GNAT) family AMD27_RS08710 PF00487 Fatty acid desaturase AMD27_RS08715 PF12852 Cupin AMD27_RS08715 PF12833 Helix-turn-helix domain AMD27_RS08725 PF00216 Bacterial DNA-binding protein AMD27_RS08740 PF02082 Transcriptional regulator AMD27_RS08745 PF00266 Aminotransferase class-V AMD27_RS08750 PF01592 NifU-like N terminal domain AMD27_RS08755 PF01521 Iron-sulphur cluster biosynthesis AMD27_RS08760 PF07743 HSCB C-terminal oligomerisation domain AMD27_RS08760 PF00226 DnaJ domain AMD27_RS08765 PF00012 Hsp70 protein AMD27_RS08770 PF00111 2Fe-2S iron-sulfur cluster binding domain AMD27_RS08775 PF00211 Adenylate and Guanylate cyclase catalytic domain AMD27_RS08785 PF00271 Helicase conserved C-terminal domain AMD27_RS08785 PF03461 TRCF domain AMD27_RS08785 PF00270 DEAD/DEAH box helicase AMD27_RS08785 PF17757 UvrB interaction domain AMD27_RS08785 PF02559 CarD-like/TRCF domain AMD27_RS08800 PF03737 Aldolase/RraA AMD27_RS08805 PF13460 NAD(P)H-binding AMD27_RS08810 PF01649 Ribosomal protein S20 AMD27_RS08820 PF00459 Inositol monophosphatase family AMD27_RS08825 PF13419 Haloacid dehalogenase-like hydrolase AMD27_RS08830 PF01479 S4 domain AMD27_RS08835 PF00154 recA bacterial DNA recombination protein AMD27_RS08840 PF02631 RecX family AMD27_RS08855 PF00132 Bacterial transferase hexapeptide (six repeats) AMD27_RS08855 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AMD27_RS08860 PF07977 FabA-like domain AMD27_RS08865 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AMD27_RS08865 PF00132 Bacterial transferase hexapeptide (six repeats) AMD27_RS08875 PF07244 Surface antigen variable number repeat AMD27_RS08875 PF01103 Surface antigen AMD27_RS08880 PF17820 PDZ domain AMD27_RS08880 PF13180 PDZ domain AMD27_RS08880 PF02163 Peptidase family M50 AMD27_RS08885 PF13288 DXP reductoisomerase C-terminal domain AMD27_RS08885 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AMD27_RS08885 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AMD27_RS08895 PF01255 Putative undecaprenyl diphosphate synthase AMD27_RS08900 PF01765 Ribosome recycling factor AMD27_RS08905 PF00696 Amino acid kinase family AMD27_RS08910 PF18693 TRAM domain AMD27_RS08910 PF00919 Uncharacterized protein family UPF0004 AMD27_RS08910 PF04055 Radical SAM superfamily AMD27_RS08915 PF00512 His Kinase A (phospho-acceptor) domain AMD27_RS08915 PF00989 PAS fold AMD27_RS08915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD27_RS08920 PF00072 Response regulator receiver domain AMD27_RS08920 PF02954 Bacterial regulatory protein, Fis family AMD27_RS08920 PF00158 Sigma-54 interaction domain AMD27_RS08930 PF00285 Citrate synthase, C-terminal domain AMD27_RS08940 PF00440 Bacterial regulatory proteins, tetR family AMD27_RS08945 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AMD27_RS08945 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AMD27_RS08950 PF00083 Sugar (and other) transporter AMD27_RS08955 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AMD27_RS08960 PF00004 ATPase family associated with various cellular activities (AAA) AMD27_RS08960 PF17871 AAA lid domain AMD27_RS08960 PF02861 Clp amino terminal domain, pathogenicity island component AMD27_RS08960 PF10431 C-terminal, D2-small domain, of ClpB protein AMD27_RS08960 PF07724 AAA domain (Cdc48 subfamily) AMD27_RS08965 PF02617 ATP-dependent Clp protease adaptor protein ClpS AMD27_RS08975 PF02774 Semialdehyde dehydrogenase, dimerisation domain AMD27_RS08975 PF01118 Semialdehyde dehydrogenase, NAD binding domain AMD27_RS08995 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AMD27_RS09000 PF00585 C-terminal regulatory domain of Threonine dehydratase AMD27_RS09000 PF00291 Pyridoxal-phosphate dependent enzyme AMD27_RS09015 PF13737 Transposase DDE domain AMD27_RS09025 PF02254 TrkA-N domain AMD27_RS09025 PF02080 TrkA-C domain AMD27_RS09030 PF02386 Cation transport protein AMD27_RS09040 PF04607 Region found in RelA / SpoT proteins AMD27_RS09040 PF02824 TGS domain AMD27_RS09040 PF13291 ACT domain AMD27_RS09045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD27_RS09045 PF03466 LysR substrate binding domain AMD27_RS09050 PF05958 tRNA (Uracil-5-)-methyltransferase AMD27_RS09070 PF00248 Aldo/keto reductase family AMD27_RS09075 PF03466 LysR substrate binding domain AMD27_RS09075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD27_RS09080 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AMD27_RS09080 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMD27_RS09085 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AMD27_RS09090 PF00149 Calcineurin-like phosphoesterase AMD27_RS09100 PF00881 Nitroreductase family AMD27_RS09105 PF01266 FAD dependent oxidoreductase AMD27_RS09110 PF01098 Cell cycle protein AMD27_RS09115 PF01266 FAD dependent oxidoreductase AMD27_RS09130 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AMD27_RS09135 PF04977 Septum formation initiator AMD27_RS09140 PF03952 Enolase, N-terminal domain AMD27_RS09140 PF00113 Enolase, C-terminal TIM barrel domain AMD27_RS09145 PF00793 DAHP synthetase I family AMD27_RS09150 PF06418 CTP synthase N-terminus AMD27_RS09150 PF00117 Glutamine amidotransferase class-I AMD27_RS09165 PF02872 5'-nucleotidase, C-terminal domain AMD27_RS09165 PF00149 Calcineurin-like phosphoesterase AMD27_RS09180 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMD27_RS09180 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD27_RS09190 PF00561 alpha/beta hydrolase fold AMD27_RS09200 PF02146 Sir2 family AMD27_RS09210 PF10415 Fumarase C C-terminus AMD27_RS09210 PF00206 Lyase AMD27_RS09215 PF00474 Sodium:solute symporter family AMD27_RS09220 PF01037 Lrp/AsnC ligand binding domain AMD27_RS09225 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AMD27_RS09225 PF14850 DNA-binding domain of Proline dehydrogenase AMD27_RS09225 PF00171 Aldehyde dehydrogenase family AMD27_RS09225 PF01619 Proline dehydrogenase AMD27_RS09230 PF01433 Peptidase family M1 domain AMD27_RS09230 PF11940 Domain of unknown function (DUF3458) Ig-like fold AMD27_RS09230 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AMD27_RS09240 PF02110 Hydroxyethylthiazole kinase family AMD27_RS09250 PF05970 PIF1-like helicase AMD27_RS09250 PF14493 Helix-turn-helix domain AMD27_RS09265 PF00106 short chain dehydrogenase AMD27_RS09280 PF00171 Aldehyde dehydrogenase family AMD27_RS09290 PF06751 Ethanolamine ammonia lyase large subunit (EutB) AMD27_RS09295 PF05985 Ethanolamine ammonia-lyase light chain (EutC) AMD27_RS09300 PF00107 Zinc-binding dehydrogenase AMD27_RS09300 PF08240 Alcohol dehydrogenase GroES-like domain AMD27_RS09305 PF01323 DSBA-like thioredoxin domain AMD27_RS09315 PF02540 NAD synthase AMD27_RS09315 PF00117 Glutamine amidotransferase class-I AMD27_RS09315 PF00958 GMP synthase C terminal domain AMD27_RS09320 PF01810 LysE type translocator AMD27_RS09345 PF02779 Transketolase, pyrimidine binding domain AMD27_RS09345 PF02780 Transketolase, C-terminal domain AMD27_RS09345 PF00456 Transketolase, thiamine diphosphate binding domain AMD27_RS09350 PF00990 Diguanylate cyclase, GGDEF domain AMD27_RS09350 PF00072 Response regulator receiver domain AMD27_RS09360 PF00438 S-adenosylmethionine synthetase, N-terminal domain AMD27_RS09360 PF02772 S-adenosylmethionine synthetase, central domain AMD27_RS09360 PF02773 S-adenosylmethionine synthetase, C-terminal domain AMD27_RS09375 PF01810 LysE type translocator AMD27_RS09385 PF02075 Crossover junction endodeoxyribonuclease RuvC AMD27_RS09400 PF03853 YjeF-related protein N-terminus AMD27_RS09400 PF01256 Carbohydrate kinase AMD27_RS09405 PF08331 Domain of unknown function (DUF1730) AMD27_RS09410 PF04055 Radical SAM superfamily AMD27_RS09410 PF06968 Biotin and Thiamin Synthesis associated domain AMD27_RS09420 PF07690 Major Facilitator Superfamily AMD27_RS09420 PF00083 Sugar (and other) transporter AMD27_RS09430 PF00378 Enoyl-CoA hydratase/isomerase AMD27_RS09435 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD27_RS09435 PF02770 Acyl-CoA dehydrogenase, middle domain AMD27_RS09435 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD27_RS09440 PF00501 AMP-binding enzyme AMD27_RS09440 PF13193 AMP-binding enzyme C-terminal domain AMD27_RS09445 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMD27_RS09445 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AMD27_RS09450 PF00171 Aldehyde dehydrogenase family AMD27_RS09455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD27_RS09455 PF03466 LysR substrate binding domain AMD27_RS09460 PF01553 Acyltransferase AMD27_RS09470 PF01709 Transcriptional regulator AMD27_RS09490 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD27_RS09490 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AMD27_RS09500 PF00296 Luciferase-like monooxygenase AMD27_RS09505 PF03180 NLPA lipoprotein AMD27_RS09510 PF09383 NIL domain AMD27_RS09510 PF00005 ABC transporter AMD27_RS09515 PF00528 Binding-protein-dependent transport system inner membrane component AMD27_RS09520 PF01926 50S ribosome-binding GTPase AMD27_RS09520 PF06071 Protein of unknown function (DUF933) AMD27_RS09530 PF03591 AzlC protein AMD27_RS09535 PF05437 Branched-chain amino acid transport protein (AzlD) AMD27_RS09540 PF02222 ATP-grasp domain AMD27_RS09545 PF01966 HD domain AMD27_RS09545 PF01909 Nucleotidyltransferase domain AMD27_RS09545 PF08335 GlnD PII-uridylyltransferase AMD27_RS09550 PF00155 Aminotransferase class I and II AMD27_RS09555 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AMD27_RS09565 PF00216 Bacterial DNA-binding protein AMD27_RS09570 PF00575 S1 RNA binding domain AMD27_RS09575 PF02224 Cytidylate kinase AMD27_RS09585 PF14437 MafB19-like deaminase AMD27_RS09595 PF03167 Uracil DNA glycosylase superfamily AMD27_RS09605 PF03934 Type II secretion system (T2SS), protein K AMD27_RS09610 PF11612 Type II secretion system (T2SS), protein J AMD27_RS09610 PF07963 Prokaryotic N-terminal methylation motif AMD27_RS09615 PF02501 Type II secretion system (T2SS), protein I AMD27_RS09615 PF07963 Prokaryotic N-terminal methylation motif AMD27_RS09620 PF08334 Type II secretion system (T2SS), protein G AMD27_RS09620 PF07963 Prokaryotic N-terminal methylation motif AMD27_RS09630 PF01026 TatD related DNase AMD27_RS09640 PF09115 DNA polymerase III, delta subunit, C terminal AMD27_RS09645 PF02348 Cytidylyltransferase AMD27_RS09650 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AMD27_RS09655 PF00005 ABC transporter AMD27_RS09655 PF00664 ABC transporter transmembrane region AMD27_RS09665 PF01618 MotA/TolQ/ExbB proton channel family AMD27_RS09670 PF17762 HTH domain found in ParB protein AMD27_RS09670 PF02195 ParB-like nuclease domain AMD27_RS09675 PF13614 AAA domain AMD27_RS09680 PF02527 rRNA small subunit methyltransferase G AMD27_RS09685 PF00483 Nucleotidyl transferase AMD27_RS09690 PF01636 Phosphotransferase enzyme family AMD27_RS09695 PF03968 OstA-like protein AMD27_RS09695 PF04453 LPS transport system D AMD27_RS09700 PF09312 SurA N-terminal domain AMD27_RS09700 PF00639 PPIC-type PPIASE domain AMD27_RS09705 PF17209 Hfq protein AMD27_RS09715 PF08676 MutL C terminal dimerisation domain AMD27_RS09715 PF01119 DNA mismatch repair protein, C-terminal domain AMD27_RS09720 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AMD27_RS09730 PF00849 RNA pseudouridylate synthase AMD27_RS09730 PF01479 S4 domain AMD27_RS09745 PF01479 S4 domain AMD27_RS09745 PF00849 RNA pseudouridylate synthase AMD27_RS09750 PF04284 Protein of unknown function (DUF441) AMD27_RS09755 PF03616 Sodium/glutamate symporter AMD27_RS09760 PF03616 Sodium/glutamate symporter AMD27_RS09775 PF00330 Aconitase family (aconitate hydratase) AMD27_RS09775 PF06434 Aconitate hydratase 2 N-terminus AMD27_RS09775 PF11791 Aconitate B N-terminal domain AMD27_RS09795 PF04357 TamB, inner membrane protein subunit of TAM complex AMD27_RS09800 PF17243 POTRA domain TamA domain 1 AMD27_RS09800 PF07244 Surface antigen variable number repeat AMD27_RS09800 PF01103 Surface antigen AMD27_RS09805 PF07690 Major Facilitator Superfamily AMD27_RS09810 PF03232 Ubiquinone biosynthesis protein COQ7 AMD27_RS09815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD27_RS09815 PF03466 LysR substrate binding domain AMD27_RS09825 PF02152 Dihydroneopterin aldolase AMD27_RS09830 PF03109 ABC1 family AMD27_RS09835 PF00899 ThiF family AMD27_RS09840 PF00106 short chain dehydrogenase AMD27_RS09850 PF17827 PrmC N-terminal domain AMD27_RS09850 PF13847 Methyltransferase domain AMD27_RS09855 PF03462 PCRF domain AMD27_RS09855 PF00472 RF-1 domain AMD27_RS09870 PF00296 Luciferase-like monooxygenase AMD27_RS09890 PF02954 Bacterial regulatory protein, Fis family AMD27_RS09895 PF01808 AICARFT/IMPCHase bienzyme AMD27_RS09895 PF02142 MGS-like domain AMD27_RS09900 PF02844 Phosphoribosylglycinamide synthetase, N domain AMD27_RS09900 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AMD27_RS09900 PF02843 Phosphoribosylglycinamide synthetase, C domain AMD27_RS09910 PF03180 NLPA lipoprotein AMD27_RS09915 PF09383 NIL domain AMD27_RS09915 PF00005 ABC transporter AMD27_RS09920 PF00528 Binding-protein-dependent transport system inner membrane component AMD27_RS09935 PF13359 DDE superfamily endonuclease AMD27_RS09935 PF13613 Helix-turn-helix of DDE superfamily endonuclease AMD27_RS09945 PF16123 Hydroxyacylglutathione hydrolase C-terminus AMD27_RS09945 PF00753 Metallo-beta-lactamase superfamily AMD27_RS10010 PF00814 Glycoprotease family AMD27_RS10015 PF01165 Ribosomal protein S21 AMD27_RS10020 PF09424 Yqey-like protein AMD27_RS10035 PF01435 Peptidase family M48 AMD27_RS10040 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMD27_RS10040 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMD27_RS10050 PF01435 Peptidase family M48 AMD27_RS10055 PF00156 Phosphoribosyl transferase domain AMD27_RS10065 PF01180 Dihydroorotate dehydrogenase AMD27_RS10085 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AMD27_RS10085 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AMD27_RS10090 PF00881 Nitroreductase family AMD27_RS10100 PF00270 DEAD/DEAH box helicase AMD27_RS10100 PF00271 Helicase conserved C-terminal domain AMD27_RS10105 PF00313 'Cold-shock' DNA-binding domain AMD27_RS10115 PF00140 Sigma-70 factor, region 1.2 AMD27_RS10115 PF04542 Sigma-70 region 2 AMD27_RS10115 PF04545 Sigma-70, region 4 AMD27_RS10120 PF04241 Protein of unknown function (DUF423) AMD27_RS10130 PF05690 Thiazole biosynthesis protein ThiG AMD27_RS10135 PF03992 Antibiotic biosynthesis monooxygenase AMD27_RS10140 PF02525 Flavodoxin-like fold AMD27_RS10145 PF02798 Glutathione S-transferase, N-terminal domain AMD27_RS10145 PF00043 Glutathione S-transferase, C-terminal domain AMD27_RS10155 PF00916 Sulfate permease family AMD27_RS10155 PF01740 STAS domain AMD27_RS10165 PF02390 Putative methyltransferase AMD27_RS10185 PF00691 OmpA family AMD27_RS10185 PF04972 BON domain AMD27_RS10190 PF01979 Amidohydrolase family AMD27_RS10195 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AMD27_RS10195 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AMD27_RS10205 PF02926 THUMP domain AMD27_RS10205 PF01170 Putative RNA methylase family UPF0020 AMD27_RS10205 PF10672 S-adenosylmethionine-dependent methyltransferase AMD27_RS10215 PF07724 AAA domain (Cdc48 subfamily) AMD27_RS10215 PF02861 Clp amino terminal domain, pathogenicity island component AMD27_RS10215 PF00004 ATPase family associated with various cellular activities (AAA) AMD27_RS10215 PF17871 AAA lid domain AMD27_RS10215 PF10431 C-terminal, D2-small domain, of ClpB protein AMD27_RS10220 PF00132 Bacterial transferase hexapeptide (six repeats) AMD27_RS10235 PF00266 Aminotransferase class-V AMD27_RS10240 PF02566 OsmC-like protein AMD27_RS10245 PF13545 Crp-like helix-turn-helix domain AMD27_RS10245 PF00027 Cyclic nucleotide-binding domain AMD27_RS10250 PF00248 Aldo/keto reductase family AMD27_RS10270 PF00709 Adenylosuccinate synthetase AMD27_RS10275 PF13393 Histidyl-tRNA synthetase AMD27_RS10285 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AMD27_RS10285 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMD27_RS10290 PF02272 DHHA1 domain AMD27_RS10290 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AMD27_RS10290 PF01411 tRNA synthetases class II (A) AMD27_RS10300 PF01842 ACT domain AMD27_RS10300 PF00696 Amino acid kinase family AMD27_RS10300 PF13840 ACT domain AMD27_RS10305 PF02599 Global regulator protein family AMD27_RS10310 PF01351 Ribonuclease HII AMD27_RS10320 PF01292 Prokaryotic cytochrome b561 AMD27_RS10330 PF00962 Adenosine/AMP deaminase AMD27_RS10335 PF00860 Permease family AMD27_RS10345 PF00860 Permease family AMD27_RS10350 PF01613 Flavin reductase like domain AMD27_RS10355 PF01042 Endoribonuclease L-PSP AMD27_RS10360 PF00857 Isochorismatase family AMD27_RS10365 PF00296 Luciferase-like monooxygenase AMD27_RS10370 PF12697 Alpha/beta hydrolase family AMD27_RS10375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD27_RS10375 PF03466 LysR substrate binding domain AMD27_RS10380 PF03971 Monomeric isocitrate dehydrogenase AMD27_RS10400 PF17863 AAA lid domain AMD27_RS10400 PF07726 ATPase family associated with various cellular activities (AAA) AMD27_RS10405 PF02558 Ketopantoate reductase PanE/ApbA AMD27_RS10405 PF08546 Ketopantoate reductase PanE/ApbA C terminal AMD27_RS10410 PF04328 Selenoprotein, putative AMD27_RS10415 PF13722 5TM C-terminal transporter carbon starvation CstA AMD27_RS10415 PF02554 Carbon starvation protein CstA AMD27_RS10420 PF09285 Elongation factor P, C-terminal AMD27_RS10420 PF08207 Elongation factor P (EF-P) KOW-like domain AMD27_RS10420 PF01132 Elongation factor P (EF-P) OB domain AMD27_RS10425 PF04055 Radical SAM superfamily AMD27_RS10440 PF01197 Ribosomal protein L31 AMD27_RS10445 PF13593 SBF-like CPA transporter family (DUF4137) AMD27_RS10450 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD27_RS10455 PF07690 Major Facilitator Superfamily AMD27_RS10460 PF13654 AAA domain AMD27_RS10460 PF05362 Lon protease (S16) C-terminal proteolytic domain AMD27_RS10465 PF00462 Glutaredoxin AMD27_RS10470 PF00202 Aminotransferase class-III AMD27_RS10475 PF03466 LysR substrate binding domain AMD27_RS10475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD27_RS10480 PF01476 LysM domain AMD27_RS10480 PF01551 Peptidase family M23 AMD27_RS10485 PF01975 Survival protein SurE AMD27_RS10500 PF00768 D-alanyl-D-alanine carboxypeptidase AMD27_RS10500 PF07943 Penicillin-binding protein 5, C-terminal domain AMD27_RS10505 PF00132 Bacterial transferase hexapeptide (six repeats) AMD27_RS10520 PF05275 Copper resistance protein B precursor (CopB) AMD27_RS10525 PF00394 Multicopper oxidase AMD27_RS10525 PF07732 Multicopper oxidase AMD27_RS10525 PF07731 Multicopper oxidase AMD27_RS10535 PF00293 NUDIX domain AMD27_RS10545 PF04356 Protein of unknown function (DUF489) AMD27_RS10550 PF00206 Lyase AMD27_RS10550 PF08328 Adenylosuccinate lyase C-terminal AMD27_RS10565 PF08496 Peptidase family S49 N-terminal AMD27_RS10565 PF01343 Peptidase family S49 AMD27_RS10570 PF01966 HD domain AMD27_RS10575 PF07499 RuvA, C-terminal domain AMD27_RS10575 PF01330 RuvA N terminal domain AMD27_RS10580 PF05491 RuvB C-terminal winged helix domain AMD27_RS10580 PF05496 Holliday junction DNA helicase RuvB P-loop domain AMD27_RS10580 PF17864 RuvB AAA lid domain AMD27_RS10590 PF03061 Thioesterase superfamily AMD27_RS10595 PF01618 MotA/TolQ/ExbB proton channel family AMD27_RS10600 PF02472 Biopolymer transport protein ExbD/TolR AMD27_RS10615 PF07676 WD40-like Beta Propeller Repeat AMD27_RS10615 PF04052 TolB amino-terminal domain AMD27_RS10620 PF00691 OmpA family AMD27_RS10630 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AMD27_RS10635 PF08032 RNA 2'-O ribose methyltransferase substrate binding AMD27_RS10635 PF00588 SpoU rRNA Methylase family AMD27_RS10655 PF03449 Transcription elongation factor, N-terminal AMD27_RS10655 PF01272 Transcription elongation factor, GreA/GreB, C-term AMD27_RS10660 PF00464 Serine hydroxymethyltransferase AMD27_RS10690 PF00005 ABC transporter AMD27_RS10695 PF01061 ABC-2 type transporter AMD27_RS10700 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AMD27_RS10700 PF14489 QueF-like protein AMD27_RS10710 PF01098 Cell cycle protein AMD27_RS10715 PF13406 Transglycosylase SLT domain AMD27_RS10720 PF03330 Lytic transglycolase AMD27_RS10720 PF05036 Sporulation related domain AMD27_RS10735 PF00889 Elongation factor TS AMD27_RS10740 PF00318 Ribosomal protein S2 AMD27_RS10750 PF00557 Metallopeptidase family M24 AMD27_RS10765 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AMD27_RS10770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD27_RS10770 PF03466 LysR substrate binding domain AMD27_RS10775 PF02678 Pirin AMD27_RS10775 PF05726 Pirin C-terminal cupin domain AMD27_RS10790 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMD27_RS10790 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD27_RS10795 PF04055 Radical SAM superfamily AMD27_RS10800 PF09317 Domain of unknown function (DUF1974) AMD27_RS10800 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD27_RS10800 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD27_RS10805 PF00108 Thiolase, N-terminal domain AMD27_RS10805 PF02803 Thiolase, C-terminal domain AMD27_RS10840 PF05221 S-adenosyl-L-homocysteine hydrolase AMD27_RS10840 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AMD27_RS10845 PF02219 Methylenetetrahydrofolate reductase AMD27_RS10850 PF04452 RNA methyltransferase AMD27_RS10855 PF00563 EAL domain AMD27_RS10855 PF03707 Bacterial signalling protein N terminal repeat AMD27_RS10855 PF00990 Diguanylate cyclase, GGDEF domain AMD27_RS10860 PF01515 Phosphate acetyl/butaryl transferase AMD27_RS10860 PF03949 Malic enzyme, NAD binding domain AMD27_RS10860 PF00390 Malic enzyme, N-terminal domain AMD27_RS10865 PF01743 Poly A polymerase head domain AMD27_RS10865 PF12627 Probable RNA and SrmB- binding site of polymerase A AMD27_RS10885 PF00152 tRNA synthetases class II (D, K and N) AMD27_RS10890 PF11890 Domain of unknown function (DUF3410) AMD27_RS10890 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMD27_RS10890 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMD27_RS10895 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMD27_RS10900 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMD27_RS10905 PF00005 ABC transporter AMD27_RS10910 PF00528 Binding-protein-dependent transport system inner membrane component AMD27_RS10915 PF00528 Binding-protein-dependent transport system inner membrane component AMD27_RS10925 PF02470 MlaD protein AMD27_RS10930 PF04403 Paraquat-inducible protein A AMD27_RS10935 PF04403 Paraquat-inducible protein A AMD27_RS10995 PF05860 haemagglutination activity domain AMD27_RS10995 PF13332 Hemagglutinin repeat AMD27_RS10995 PF13018 Extended Signal Peptide of Type V secretion system AMD27_RS10995 PF04829 Pre-toxin domain with VENN motif AMD27_RS11000 PF08479 POTRA domain, ShlB-type AMD27_RS11000 PF17287 POTRA domain AMD27_RS11000 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AMD27_RS11005 PF13737 Transposase DDE domain AMD27_RS11010 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD27_RS11010 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMD27_RS11020 PF00892 EamA-like transporter family AMD27_RS11025 PF03466 LysR substrate binding domain AMD27_RS11025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD27_RS11030 PF00764 Arginosuccinate synthase AMD27_RS11035 PF00360 Phytochrome region AMD27_RS11035 PF00990 Diguanylate cyclase, GGDEF domain AMD27_RS11035 PF01590 GAF domain AMD27_RS11035 PF00563 EAL domain AMD27_RS11040 PF01979 Amidohydrolase family AMD27_RS11045 PF00929 Exonuclease AMD27_RS11065 PF00266 Aminotransferase class-V AMD27_RS11090 PF00521 DNA gyrase/topoisomerase IV, subunit A AMD27_RS11090 PF03989 DNA gyrase C-terminal domain, beta-propeller AMD27_RS11100 PF00766 Electron transfer flavoprotein FAD-binding domain AMD27_RS11100 PF01012 Electron transfer flavoprotein domain AMD27_RS11105 PF01012 Electron transfer flavoprotein domain AMD27_RS11110 PF01810 LysE type translocator AMD27_RS11115 PF01037 Lrp/AsnC ligand binding domain AMD27_RS11125 PF02899 Phage integrase, N-terminal SAM-like domain AMD27_RS11125 PF00589 Phage integrase family AMD27_RS11135 PF01678 Diaminopimelate epimerase AMD27_RS11140 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AMD27_RS11140 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AMD27_RS11150 PF00324 Amino acid permease AMD27_RS11155 PF01235 Sodium:alanine symporter family AMD27_RS11165 PF18073 Rubredoxin metal binding domain AMD27_RS11175 PF01177 Asp/Glu/Hydantoin racemase AMD27_RS11180 PF17820 PDZ domain AMD27_RS11180 PF13180 PDZ domain AMD27_RS11185 PF01784 NIF3 (NGG1p interacting factor 3) AMD27_RS11190 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AMD27_RS11190 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AMD27_RS11225 PF01098 Cell cycle protein AMD27_RS11235 PF01040 UbiA prenyltransferase family AMD27_RS11240 PF04345 Chorismate lyase AMD27_RS11250 PF03951 Glutamine synthetase, beta-Grasp domain AMD27_RS11250 PF00120 Glutamine synthetase, catalytic domain AMD27_RS11265 PF00117 Glutamine amidotransferase class-I AMD27_RS11270 PF02885 Glycosyl transferase family, helical bundle domain AMD27_RS11270 PF00591 Glycosyl transferase family, a/b domain AMD27_RS11275 PF00218 Indole-3-glycerol phosphate synthase AMD27_RS11285 PF01227 GTP cyclohydrolase I AMD27_RS11300 PF04273 Putative phosphatase (DUF442) AMD27_RS11300 PF00753 Metallo-beta-lactamase superfamily AMD27_RS11310 PF04143 Sulphur transport AMD27_RS11315 PF13737 Transposase DDE domain AMD27_RS11320 PF05675 Protein of unknown function (DUF817) AMD27_RS11325 PF01208 Uroporphyrinogen decarboxylase (URO-D) AMD27_RS11335 PF17954 Quercetinase C-terminal cupin domain AMD27_RS11335 PF02678 Pirin AMD27_RS11345 PF13737 Transposase DDE domain AMD27_RS11350 PF13340 Putative transposase of IS4/5 family (DUF4096) AMD27_RS11355 PF00106 short chain dehydrogenase AMD27_RS11365 PF03466 LysR substrate binding domain AMD27_RS11365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD27_RS11370 PF13737 Transposase DDE domain AMD27_RS11415 PF01272 Transcription elongation factor, GreA/GreB, C-term AMD27_RS11415 PF03449 Transcription elongation factor, N-terminal AMD27_RS11420 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMD27_RS11420 PF01464 Transglycosylase SLT domain AMD27_RS11430 PF01171 PP-loop family AMD27_RS11435 PF01551 Peptidase family M23 AMD27_RS11435 PF01464 Transglycosylase SLT domain AMD27_RS11435 PF10145 Phage-related minor tail protein AMD27_RS11440 PF01435 Peptidase family M48 AMD27_RS11455 PF00873 AcrB/AcrD/AcrF family AMD27_RS11460 PF03009 Glycerophosphoryl diester phosphodiesterase family AMD27_RS11470 PF01219 Prokaryotic diacylglycerol kinase AMD27_RS11490 PF00118 TCP-1/cpn60 chaperonin family AMD27_RS11495 PF00166 Chaperonin 10 Kd subunit AMD27_RS11500 PF00149 Calcineurin-like phosphoesterase AMD27_RS11505 PF00781 Diacylglycerol kinase catalytic domain AMD27_RS11510 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain AMD27_RS11510 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain AMD27_RS11515 PF00083 Sugar (and other) transporter AMD27_RS11530 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AMD27_RS11530 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AMD27_RS11550 PF09423 PhoD-like phosphatase AMD27_RS11550 PF16655 PhoD-like phosphatase, N-terminal domain AMD27_RS11570 PF12450 von Willebrand factor AMD27_RS11570 PF00092 von Willebrand factor type A domain AMD27_RS11570 PF12034 Domain of unknown function (DUF3520) AMD27_RS11575 PF00809 Pterin binding enzyme AMD27_RS11580 PF01434 Peptidase family M41 AMD27_RS11580 PF06480 FtsH Extracellular AMD27_RS11580 PF17862 AAA+ lid domain AMD27_RS11580 PF00004 ATPase family associated with various cellular activities (AAA) AMD27_RS11585 PF01728 FtsJ-like methyltransferase AMD27_RS11590 PF01985 CRS1 / YhbY (CRM) domain AMD27_RS11600 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AMD27_RS11600 PF00117 Glutamine amidotransferase class-I AMD27_RS11605 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AMD27_RS11605 PF02142 MGS-like domain AMD27_RS11605 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMD27_RS11610 PF01272 Transcription elongation factor, GreA/GreB, C-term AMD27_RS11610 PF03449 Transcription elongation factor, N-terminal AMD27_RS11620 PF00132 Bacterial transferase hexapeptide (six repeats) AMD27_RS11630 PF01527 Transposase AMD27_RS11640 PF00582 Universal stress protein family AMD27_RS11645 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AMD27_RS11650 PF00561 alpha/beta hydrolase fold AMD27_RS11660 PF00999 Sodium/hydrogen exchanger family AMD27_RS11665 PF04228 Putative neutral zinc metallopeptidase AMD27_RS11670 PF05661 Protein of unknown function (DUF808) AMD27_RS11675 PF00579 tRNA synthetases class I (W and Y) AMD27_RS11685 PF15975 Flotillin AMD27_RS11685 PF01145 SPFH domain / Band 7 family AMD27_RS11700 PF01553 Acyltransferase AMD27_RS11705 PF00463 Isocitrate lyase family AMD27_RS11710 PF03466 LysR substrate binding domain AMD27_RS11710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD27_RS11715 PF00571 CBS domain AMD27_RS11715 PF01595 Cyclin M transmembrane N-terminal domain AMD27_RS11715 PF03471 Transporter associated domain AMD27_RS11720 PF03600 Citrate transporter AMD27_RS11725 PF13737 Transposase DDE domain AMD27_RS11745 PF04239 Protein of unknown function (DUF421) AMD27_RS11760 PF00909 Ammonium Transporter Family AMD27_RS11780 PF01734 Patatin-like phospholipase AMD27_RS11790 PF01145 SPFH domain / Band 7 family AMD27_RS11795 PF00474 Sodium:solute symporter family AMD27_RS11800 PF00348 Polyprenyl synthetase AMD27_RS11810 PF04303 PrpF protein AMD27_RS11815 PF00324 Amino acid permease AMD27_RS11845 PF01507 Phosphoadenosine phosphosulfate reductase family AMD27_RS11850 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain AMD27_RS11850 PF06974 Protein of unknown function (DUF1298) AMD27_RS11855 PF00575 S1 RNA binding domain AMD27_RS11855 PF10150 Ribonuclease E/G family AMD27_RS11860 PF02545 Maf-like protein AMD27_RS11870 PF04085 rod shape-determining protein MreC AMD27_RS11880 PF02686 Glu-tRNAGln amidotransferase C subunit AMD27_RS11885 PF01425 Amidase AMD27_RS11890 PF02637 GatB domain AMD27_RS11890 PF02934 GatB/GatE catalytic domain AMD27_RS11915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD27_RS11915 PF03466 LysR substrate binding domain AMD27_RS11930 PF05992 SbmA/BacA-like family AMD27_RS11945 PF00535 Glycosyl transferase family 2 AMD27_RS11950 PF14883 Hypothetical glycosyl hydrolase family 13 AMD27_RS11950 PF01522 Polysaccharide deacetylase AMD27_RS11955 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMD27_RS11960 PF07152 YaeQ protein AMD27_RS11965 PF07683 Cobalamin synthesis protein cobW C-terminal domain AMD27_RS11965 PF02492 CobW/HypB/UreG, nucleotide-binding domain AMD27_RS11975 PF03061 Thioesterase superfamily AMD27_RS11980 PF01734 Patatin-like phospholipase AMD27_RS11985 PF03616 Sodium/glutamate symporter AMD27_RS12005 PF07690 Major Facilitator Superfamily AMD27_RS12010 PF12805 FUSC-like inner membrane protein yccS AMD27_RS12015 PF12805 FUSC-like inner membrane protein yccS AMD27_RS12025 PF00667 FAD binding domain AMD27_RS12025 PF00175 Oxidoreductase NAD-binding domain AMD27_RS12025 PF00258 Flavodoxin AMD27_RS12080 PF03734 L,D-transpeptidase catalytic domain AMD27_RS12080 PF01476 LysM domain AMD27_RS12085 PF04304 Protein of unknown function (DUF454) AMD27_RS12100 PF07687 Peptidase dimerisation domain AMD27_RS12100 PF01546 Peptidase family M20/M25/M40 AMD27_RS12110 PF01627 Hpt domain AMD27_RS12110 PF00072 Response regulator receiver domain AMD27_RS12110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD27_RS12110 PF01584 CheW-like domain AMD27_RS12115 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AMD27_RS12115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMD27_RS12120 PF01584 CheW-like domain AMD27_RS12125 PF00072 Response regulator receiver domain AMD27_RS12130 PF00072 Response regulator receiver domain AMD27_RS12140 PF13533 Biotin-lipoyl like AMD27_RS12145 PF00873 AcrB/AcrD/AcrF family AMD27_RS12150 PF04073 Aminoacyl-tRNA editing domain AMD27_RS12150 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMD27_RS12150 PF03129 Anticodon binding domain AMD27_RS12175 PF00692 dUTPase AMD27_RS12185 PF10609 NUBPL iron-transfer P-loop NTPase AMD27_RS12205 PF09334 tRNA synthetases class I (M) AMD27_RS12205 PF01588 Putative tRNA binding domain AMD27_RS12215 PF05643 Putative bacterial lipoprotein (DUF799) AMD27_RS12225 PF03783 Curli production assembly/transport component CsgG AMD27_RS12255 PF00291 Pyridoxal-phosphate dependent enzyme AMD27_RS12270 PF05552 Conserved TM helix AMD27_RS12285 PF00175 Oxidoreductase NAD-binding domain AMD27_RS12285 PF00970 Oxidoreductase FAD-binding domain AMD27_RS12290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD27_RS12290 PF03466 LysR substrate binding domain AMD27_RS12295 PF13610 DDE domain AMD27_RS12310 PF00361 Proton-conducting membrane transporter AMD27_RS12315 PF00361 Proton-conducting membrane transporter AMD27_RS12320 PF00361 Proton-conducting membrane transporter AMD27_RS12320 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AMD27_RS12325 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AMD27_RS12330 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AMD27_RS12335 PF12838 4Fe-4S dicluster domain AMD27_RS12340 PF00146 NADH dehydrogenase AMD27_RS12345 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AMD27_RS12345 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AMD27_RS12345 PF00384 Molybdopterin oxidoreductase AMD27_RS12350 PF10531 SLBB domain AMD27_RS12350 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AMD27_RS12350 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AMD27_RS12360 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AMD27_RS12360 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AMD27_RS12365 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AMD27_RS12370 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AMD27_RS12380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD27_RS12380 PF00672 HAMP domain AMD27_RS12380 PF00512 His Kinase A (phospho-acceptor) domain AMD27_RS12385 PF00486 Transcriptional regulatory protein, C terminal AMD27_RS12385 PF00072 Response regulator receiver domain AMD27_RS12390 PF02867 Ribonucleotide reductase, barrel domain AMD27_RS12390 PF03477 ATP cone domain AMD27_RS12390 PF00317 Ribonucleotide reductase, all-alpha domain AMD27_RS12395 PF00268 Ribonucleotide reductase, small chain AMD27_RS12415 PF07690 Major Facilitator Superfamily AMD27_RS12425 PF00501 AMP-binding enzyme AMD27_RS12425 PF00668 Condensation domain AMD27_RS12425 PF00550 Phosphopantetheine attachment site AMD27_RS12425 PF13193 AMP-binding enzyme C-terminal domain AMD27_RS12425 PF00501 AMP-binding enzyme AMD27_RS12425 PF13193 AMP-binding enzyme C-terminal domain AMD27_RS12425 PF00668 Condensation domain AMD27_RS12425 PF00975 Thioesterase domain AMD27_RS12425 PF00975 Thioesterase domain AMD27_RS12425 PF00550 Phosphopantetheine attachment site AMD27_RS12435 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AMD27_RS12435 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AMD27_RS12440 PF00440 Bacterial regulatory proteins, tetR family AMD27_RS12460 PF01476 LysM domain AMD27_RS12460 PF04972 BON domain AMD27_RS12465 PF00550 Phosphopantetheine attachment site AMD27_RS12475 PF00698 Acyl transferase domain AMD27_RS12490 PF01783 Ribosomal L32p protein family AMD27_RS12495 PF02620 Large ribosomal RNA subunit accumulation protein YceD AMD27_RS12500 PF04315 Elongation factor P hydroxylase AMD27_RS12505 PF01300 Telomere recombination AMD27_RS12510 PF02616 Segregation and condensation protein ScpA AMD27_RS12515 PF04079 Segregation and condensation complex subunit ScpB AMD27_RS12520 PF00849 RNA pseudouridylate synthase AMD27_RS12520 PF01479 S4 domain AMD27_RS12535 PF00155 Aminotransferase class I and II AMD27_RS12540 PF04055 Radical SAM superfamily AMD27_RS12540 PF00202 Aminotransferase class-III AMD27_RS12540 PF06968 Biotin and Thiamin Synthesis associated domain AMD27_RS12545 PF08241 Methyltransferase domain AMD27_RS12545 PF12697 Alpha/beta hydrolase family AMD27_RS12555 PF00578 AhpC/TSA family AMD27_RS12560 PF00210 Ferritin-like domain AMD27_RS12565 PF05971 RNA methyltransferase AMD27_RS12570 PF16363 GDP-mannose 4,6 dehydratase AMD27_RS12575 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AMD27_RS12575 PF03120 NAD-dependent DNA ligase OB-fold domain AMD27_RS12575 PF12826 Helix-hairpin-helix motif AMD27_RS12575 PF01653 NAD-dependent DNA ligase adenylation domain AMD27_RS12575 PF00533 BRCA1 C Terminus (BRCT) domain AMD27_RS12580 PF04354 ZipA, C-terminal FtsZ-binding domain AMD27_RS12585 PF02463 RecF/RecN/SMC N terminal domain AMD27_RS12585 PF06470 SMC proteins Flexible Hinge Domain AMD27_RS12595 PF01925 Sulfite exporter TauE/SafE AMD27_RS12605 PF03309 Type III pantothenate kinase AMD27_RS12620 PF02978 Signal peptide binding domain AMD27_RS12620 PF02881 SRP54-type protein, helical bundle domain AMD27_RS12620 PF00448 SRP54-type protein, GTPase domain AMD27_RS12625 PF01578 Cytochrome C assembly protein AMD27_RS12635 PF01207 Dihydrouridine synthase (Dus) AMD27_RS12655 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) AMD27_RS12655 PF13296 Putative type VI secretion system Rhs element Vgr AMD27_RS12655 PF04717 Type VI secretion system, phage-baseplate injector AMD27_RS12665 PF00293 NUDIX domain AMD27_RS12685 PF08274 PhnA Zinc-Ribbon AMD27_RS12685 PF03831 PhnA domain AMD27_RS12695 PF00849 RNA pseudouridylate synthase AMD27_RS12710 PF00694 Aconitase C-terminal domain AMD27_RS12710 PF00330 Aconitase family (aconitate hydratase) AMD27_RS12725 PF01571 Aminomethyltransferase folate-binding domain AMD27_RS12750 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMD27_RS12755 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AMD27_RS12755 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AMD27_RS12755 PF06827 Zinc finger found in FPG and IleRS AMD27_RS12770 PF00679 Elongation factor G C-terminus AMD27_RS12770 PF00009 Elongation factor Tu GTP binding domain AMD27_RS12770 PF03144 Elongation factor Tu domain 2 AMD27_RS12775 PF00860 Permease family AMD27_RS12780 PF05175 Methyltransferase small domain AMD27_RS12780 PF08468 Methyltransferase small domain N-terminal AMD27_RS12785 PF00324 Amino acid permease AMD27_RS12795 PF00691 OmpA family AMD27_RS12795 PF13505 Outer membrane protein beta-barrel domain AMD27_RS12805 PF02803 Thiolase, C-terminal domain AMD27_RS12805 PF00108 Thiolase, N-terminal domain AMD27_RS12820 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AMD27_RS12820 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AMD27_RS12835 PF00291 Pyridoxal-phosphate dependent enzyme AMD27_RS12840 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AMD27_RS12845 PF00593 TonB dependent receptor AMD27_RS12845 PF07715 TonB-dependent Receptor Plug Domain AMD27_RS12850 PF01923 Cobalamin adenosyltransferase AMD27_RS12870 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AMD27_RS12890 PF00324 Amino acid permease AMD27_RS12895 PF00486 Transcriptional regulatory protein, C terminal AMD27_RS12895 PF00072 Response regulator receiver domain AMD27_RS12900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD27_RS12900 PF00672 HAMP domain AMD27_RS12900 PF00512 His Kinase A (phospho-acceptor) domain AMD27_RS12910 PF02770 Acyl-CoA dehydrogenase, middle domain AMD27_RS12910 PF12806 Acetyl-CoA dehydrogenase C-terminal like AMD27_RS12910 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD27_RS12910 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD27_RS12915 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD27_RS12915 PF02770 Acyl-CoA dehydrogenase, middle domain AMD27_RS12915 PF12806 Acetyl-CoA dehydrogenase C-terminal like AMD27_RS12915 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD27_RS12925 PF06146 Phosphate-starvation-inducible E AMD27_RS12945 PF07715 TonB-dependent Receptor Plug Domain AMD27_RS12945 PF00593 TonB dependent receptor AMD27_RS12960 PF02938 GAD domain AMD27_RS12960 PF00152 tRNA synthetases class II (D, K and N) AMD27_RS12960 PF01336 OB-fold nucleic acid binding domain AMD27_RS13000 PF17102 Stealth protein CR3, conserved region 3 AMD27_RS13000 PF11380 Stealth protein CR2, conserved region 2 AMD27_RS13000 PF17103 Stealth protein CR4, conserved region 4 AMD27_RS13000 PF17101 Stealth protein CR1, conserved region 1 AMD27_RS13010 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AMD27_RS13010 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AMD27_RS13010 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AMD27_RS13015 PF01370 NAD dependent epimerase/dehydratase family AMD27_RS13025 PF01063 Amino-transferase class IV AMD27_RS13030 PF08335 GlnD PII-uridylyltransferase AMD27_RS13030 PF03710 Glutamate-ammonia ligase adenylyltransferase AMD27_RS13035 PF00512 His Kinase A (phospho-acceptor) domain AMD27_RS13035 PF01627 Hpt domain AMD27_RS13035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD27_RS13035 PF00672 HAMP domain AMD27_RS13035 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMD27_RS13035 PF00072 Response regulator receiver domain AMD27_RS13045 PF02566 OsmC-like protein AMD27_RS13050 PF01047 MarR family AMD27_RS13280 PF00589 Phage integrase family AMD27_RS13290 PF02547 Queuosine biosynthesis protein AMD27_RS13310 PF01702 Queuine tRNA-ribosyltransferase AMD27_RS13315 PF02699 Preprotein translocase subunit AMD27_RS13320 PF07549 SecD/SecF GG Motif AMD27_RS13320 PF13721 SecD export protein N-terminal TM region AMD27_RS13320 PF02355 Protein export membrane protein AMD27_RS13325 PF07549 SecD/SecF GG Motif AMD27_RS13325 PF02355 Protein export membrane protein AMD27_RS13330 PF01648 4'-phosphopantetheinyl transferase superfamily AMD27_RS13340 PF00109 Beta-ketoacyl synthase, N-terminal domain AMD27_RS13340 PF02801 Beta-ketoacyl synthase, C-terminal domain AMD27_RS13355 PF02801 Beta-ketoacyl synthase, C-terminal domain AMD27_RS13355 PF00109 Beta-ketoacyl synthase, N-terminal domain AMD27_RS13365 PF04820 Tryptophan halogenase AMD27_RS13385 PF00221 Aromatic amino acid lyase AMD27_RS13400 PF07977 FabA-like domain AMD27_RS13410 PF00550 Phosphopantetheine attachment site AMD27_RS13415 PF00550 Phosphopantetheine attachment site AMD27_RS13430 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AMD27_RS13430 PF01926 50S ribosome-binding GTPase AMD27_RS13435 PF13360 PQQ-like domain AMD27_RS13435 PF01011 PQQ enzyme repeat AMD27_RS13445 PF13393 Histidyl-tRNA synthetase AMD27_RS13445 PF03129 Anticodon binding domain AMD27_RS13450 PF04551 GcpE protein AMD27_RS13455 PF13464 Domain of unknown function (DUF4115) AMD27_RS13465 PF04055 Radical SAM superfamily AMD27_RS13470 PF00334 Nucleoside diphosphate kinase AMD27_RS13475 PF04384 Iron-sulphur cluster assembly AMD27_RS13480 PF01569 PAP2 superfamily AMD27_RS13485 PF00534 Glycosyl transferases group 1 AMD27_RS13485 PF13439 Glycosyltransferase Family 4 AMD27_RS13490 PF00534 Glycosyl transferases group 1 AMD27_RS13490 PF13439 Glycosyltransferase Family 4 AMD27_RS13500 PF00082 Subtilase family AMD27_RS13510 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AMD27_RS13510 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AMD27_RS13515 PF10369 Small subunit of acetolactate synthase AMD27_RS13520 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMD27_RS13520 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMD27_RS13520 PF00205 Thiamine pyrophosphate enzyme, central domain AMD27_RS13530 PF08264 Anticodon-binding domain of tRNA AMD27_RS13530 PF09334 tRNA synthetases class I (M) AMD27_RS13530 PF13603 Leucyl-tRNA synthetase, Domain 2 AMD27_RS13530 PF00133 tRNA synthetases class I (I, L, M and V) AMD27_RS13545 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMD27_RS13550 PF02687 FtsX-like permease family AMD27_RS13550 PF12704 MacB-like periplasmic core domain AMD27_RS13550 PF00005 ABC transporter AMD27_RS13555 PF02321 Outer membrane efflux protein AMD27_RS13570 PF04717 Type VI secretion system, phage-baseplate injector AMD27_RS13570 PF13296 Putative type VI secretion system Rhs element Vgr AMD27_RS13570 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) AMD27_RS13590 PF00929 Exonuclease AMD27_RS13595 PF03193 RsgA GTPase AMD27_RS13605 PF00462 Glutaredoxin AMD27_RS13610 PF02556 Preprotein translocase subunit SecB AMD27_RS13620 PF04127 DNA / pantothenate metabolism flavoprotein AMD27_RS13620 PF02441 Flavoprotein AMD27_RS13625 PF04002 RadC-like JAB domain AMD27_RS13630 PF01062 Bestrophin, RFP-TM, chloride channel AMD27_RS13635 PF02811 PHP domain AMD27_RS13640 PF04279 Intracellular septation protein A AMD27_RS13645 PF03795 YCII-related domain AMD27_RS13655 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AMD27_RS13655 PF01266 FAD dependent oxidoreductase AMD27_RS13665 PF04461 Protein of unknown function (DUF520) AMD27_RS13680 PF03061 Thioesterase superfamily AMD27_RS13685 PF00085 Thioredoxin AMD27_RS13690 PF00753 Metallo-beta-lactamase superfamily AMD27_RS13690 PF04273 Putative phosphatase (DUF442) AMD27_RS13705 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD27_RS13705 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMD27_RS13740 PF01066 CDP-alcohol phosphatidyltransferase AMD27_RS13745 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AMD27_RS13770 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AMD27_RS13770 PF00056 lactate/malate dehydrogenase, NAD binding domain AMD27_RS13780 PF01464 Transglycosylase SLT domain AMD27_RS13780 PF10145 Phage-related minor tail protein AMD27_RS13780 PF01551 Peptidase family M23 AMD27_RS13785 PF01938 TRAM domain AMD27_RS13785 PF04055 Radical SAM superfamily AMD27_RS13785 PF00919 Uncharacterized protein family UPF0004 AMD27_RS13790 PF02562 PhoH-like protein AMD27_RS13795 PF02130 Uncharacterized protein family UPF0054 AMD27_RS13800 PF05552 Conserved TM helix AMD27_RS13800 PF00924 Mechanosensitive ion channel AMD27_RS13810 PF03544 Gram-negative bacterial TonB protein C-terminal AMD27_RS13835 PF03358 NADPH-dependent FMN reductase AMD27_RS13840 PF03631 Virulence factor BrkB AMD27_RS13845 PF00892 EamA-like transporter family AMD27_RS13850 PF01557 Fumarylacetoacetate (FAA) hydrolase family AMD27_RS13890 PF08206 Ribonuclease B OB domain AMD27_RS13890 PF08461 Ribonuclease R winged-helix domain AMD27_RS13890 PF17876 Cold shock domain AMD27_RS13890 PF00773 RNB domain AMD27_RS13890 PF00575 S1 RNA binding domain AMD27_RS13895 PF01432 Peptidase family M3 AMD27_RS13900 PF09526 Probable metal-binding protein (DUF2387) AMD27_RS13930 PF03937 Flavinator of succinate dehydrogenase AMD27_RS13935 PF02770 Acyl-CoA dehydrogenase, middle domain AMD27_RS13935 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD27_RS13935 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD27_RS13940 PF00743 Flavin-binding monooxygenase-like AMD27_RS13945 PF01196 Ribosomal protein L17 AMD27_RS13950 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AMD27_RS13950 PF01000 RNA polymerase Rpb3/RpoA insert domain AMD27_RS13950 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AMD27_RS13955 PF01479 S4 domain AMD27_RS13955 PF00163 Ribosomal protein S4/S9 N-terminal domain AMD27_RS13960 PF00411 Ribosomal protein S11 AMD27_RS13965 PF00416 Ribosomal protein S13/S18 AMD27_RS13970 PF00444 Ribosomal protein L36 AMD27_RS13975 PF00344 SecY translocase AMD27_RS13980 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AMD27_RS13985 PF00327 Ribosomal protein L30p/L7e AMD27_RS13990 PF00333 Ribosomal protein S5, N-terminal domain AMD27_RS13990 PF03719 Ribosomal protein S5, C-terminal domain AMD27_RS13995 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AMD27_RS14000 PF00347 Ribosomal protein L6 AMD27_RS14005 PF00410 Ribosomal protein S8 AMD27_RS14010 PF00253 Ribosomal protein S14p/S29e AMD27_RS14015 PF00281 Ribosomal protein L5 AMD27_RS14015 PF00673 ribosomal L5P family C-terminus AMD27_RS14020 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AMD27_RS14020 PF00467 KOW motif AMD27_RS14025 PF00238 Ribosomal protein L14p/L23e AMD27_RS14030 PF00366 Ribosomal protein S17 AMD27_RS14035 PF00831 Ribosomal L29 protein AMD27_RS14040 PF00252 Ribosomal protein L16p/L10e AMD27_RS14045 PF00189 Ribosomal protein S3, C-terminal domain AMD27_RS14045 PF07650 KH domain AMD27_RS14050 PF00237 Ribosomal protein L22p/L17e AMD27_RS14055 PF00203 Ribosomal protein S19 AMD27_RS14060 PF00181 Ribosomal Proteins L2, RNA binding domain AMD27_RS14060 PF03947 Ribosomal Proteins L2, C-terminal domain AMD27_RS14065 PF00276 Ribosomal protein L23 AMD27_RS14070 PF00573 Ribosomal protein L4/L1 family AMD27_RS14075 PF00297 Ribosomal protein L3 AMD27_RS14080 PF00338 Ribosomal protein S10p/S20e AMD27_RS14085 PF00958 GMP synthase C terminal domain AMD27_RS14085 PF00117 Glutamine amidotransferase class-I AMD27_RS14090 PF01053 Cys/Met metabolism PLP-dependent enzyme AMD27_RS14095 PF05872 Bacterial protein of unknown function (DUF853) AMD27_RS14100 PF00042 Globin AMD27_RS14100 PF00970 Oxidoreductase FAD-binding domain AMD27_RS14100 PF00175 Oxidoreductase NAD-binding domain AMD27_RS14105 PF02082 Transcriptional regulator AMD27_RS14110 PF01926 50S ribosome-binding GTPase AMD27_RS14125 PF00375 Sodium:dicarboxylate symporter family AMD27_RS14135 PF01553 Acyltransferase AMD27_RS14145 PF17191 RecG wedge domain AMD27_RS14145 PF00271 Helicase conserved C-terminal domain AMD27_RS14145 PF00270 DEAD/DEAH box helicase AMD27_RS14150 PF00156 Phosphoribosyl transferase domain AMD27_RS14160 PF03641 Possible lysine decarboxylase AMD27_RS14165 PF01544 CorA-like Mg2+ transporter protein AMD27_RS14180 PF02470 MlaD protein AMD27_RS14185 PF02405 Permease MlaE AMD27_RS14190 PF00005 ABC transporter AMD27_RS14195 PF00270 DEAD/DEAH box helicase AMD27_RS14195 PF00271 Helicase conserved C-terminal domain AMD27_RS14200 PF00459 Inositol monophosphatase family AMD27_RS14205 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AMD27_RS14205 PF02779 Transketolase, pyrimidine binding domain AMD27_RS14205 PF02780 Transketolase, C-terminal domain AMD27_RS14210 PF00925 GTP cyclohydrolase II AMD27_RS14215 PF01218 Coproporphyrinogen III oxidase AMD27_RS14225 PF01488 Shikimate / quinate 5-dehydrogenase AMD27_RS14225 PF08501 Shikimate dehydrogenase substrate binding domain AMD27_RS14225 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AMD27_RS14235 PF12806 Acetyl-CoA dehydrogenase C-terminal like AMD27_RS14235 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMD27_RS14235 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD27_RS14235 PF02770 Acyl-CoA dehydrogenase, middle domain AMD27_RS14250 PF06969 HemN C-terminal domain AMD27_RS14250 PF04055 Radical SAM superfamily AMD27_RS14260 PF01554 MatE AMD27_RS14265 PF00158 Sigma-54 interaction domain AMD27_RS14280 PF00005 ABC transporter AMD27_RS14280 PF12399 Branched-chain amino acid ATP-binding cassette transporter AMD27_RS14285 PF02653 Branched-chain amino acid transport system / permease component AMD27_RS14290 PF02653 Branched-chain amino acid transport system / permease component AMD27_RS14290 PF11862 Domain of unknown function (DUF3382) AMD27_RS14300 PF00005 ABC transporter AMD27_RS14305 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD27_RS14305 PF02770 Acyl-CoA dehydrogenase, middle domain AMD27_RS14305 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AMD27_RS14310 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD27_RS14310 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AMD27_RS14315 PF03109 ABC1 family AMD27_RS14320 PF01197 Ribosomal protein L31 AMD27_RS14325 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AMD27_RS14340 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AMD27_RS14340 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD27_RS14350 PF03884 DNA gyrase inhibitor YacG AMD27_RS14365 PF00753 Metallo-beta-lactamase superfamily AMD27_RS14370 PF00762 Ferrochelatase AMD27_RS14380 PF01177 Asp/Glu/Hydantoin racemase AMD27_RS14405 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) AMD27_RS14405 PF13296 Putative type VI secretion system Rhs element Vgr AMD27_RS14405 PF04717 Type VI secretion system, phage-baseplate injector AMD27_RS14410 PF01206 Sulfurtransferase TusA AMD27_RS14415 PF03471 Transporter associated domain AMD27_RS14415 PF00571 CBS domain AMD27_RS14420 PF00795 Carbon-nitrogen hydrolase AMD27_RS14430 PF07963 Prokaryotic N-terminal methylation motif AMD27_RS14430 PF08334 Type II secretion system (T2SS), protein G AMD27_RS14435 PF00482 Type II secretion system (T2SS), protein F AMD27_RS14440 PF18074 Primosomal protein N C-terminal domain AMD27_RS14440 PF00271 Helicase conserved C-terminal domain AMD27_RS14440 PF00270 DEAD/DEAH box helicase AMD27_RS14440 PF17764 3′ DNA-binding domain (3′BD) AMD27_RS14440 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AMD27_RS14445 PF02254 TrkA-N domain AMD27_RS14445 PF00999 Sodium/hydrogen exchanger family AMD27_RS14450 PF01430 Hsp33 protein AMD27_RS14455 PF00226 DnaJ domain AMD27_RS14455 PF01556 DnaJ C terminal domain AMD27_RS14475 PF01544 CorA-like Mg2+ transporter protein AMD27_RS14480 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AMD27_RS14480 PF00013 KH domain AMD27_RS14480 PF00575 S1 RNA binding domain AMD27_RS14480 PF03725 3' exoribonuclease family, domain 2 AMD27_RS14480 PF01138 3' exoribonuclease family, domain 1 AMD27_RS14485 PF00312 Ribosomal protein S15 AMD27_RS14490 PF00144 Beta-lactamase AMD27_RS14495 PF13538 UvrD-like helicase C-terminal domain AMD27_RS14500 PF12705 PD-(D/E)XK nuclease superfamily AMD27_RS14500 PF13361 UvrD-like helicase C-terminal domain AMD27_RS14500 PF00580 UvrD/REP helicase N-terminal domain AMD27_RS14505 PF17946 RecC C-terminal domain AMD27_RS14515 PF03976 Polyphosphate kinase 2 (PPK2) AMD27_RS14525 PF01209 ubiE/COQ5 methyltransferase family AMD27_RS14535 PF03109 ABC1 family AMD27_RS14540 PF01494 FAD binding domain AMD27_RS14545 PF01502 Phosphoribosyl-AMP cyclohydrolase AMD27_RS14560 PF13244 Domain of unknown function (DUF4040) AMD27_RS14560 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AMD27_RS14560 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AMD27_RS14560 PF00361 Proton-conducting membrane transporter AMD27_RS14565 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AMD27_RS14570 PF00361 Proton-conducting membrane transporter AMD27_RS14575 PF01899 Na+/H+ ion antiporter subunit AMD27_RS14580 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) AMD27_RS14585 PF03334 Na+/H+ antiporter subunit AMD27_RS14595 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AMD27_RS14595 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD27_RS14600 PF04898 Glutamate synthase central domain AMD27_RS14600 PF01645 Conserved region in glutamate synthase AMD27_RS14600 PF01493 GXGXG motif AMD27_RS14600 PF00310 Glutamine amidotransferases class-II AMD27_RS14610 PF01761 3-dehydroquinate synthase AMD27_RS14615 PF01202 Shikimate kinase AMD27_RS14620 PF07660 Secretin and TonB N terminus short domain AMD27_RS14620 PF03958 Bacterial type II/III secretion system short domain AMD27_RS14620 PF11741 AMIN domain AMD27_RS14620 PF00263 Bacterial type II and III secretion system protein AMD27_RS14630 PF04350 Pilus assembly protein, PilO AMD27_RS14635 PF05137 Fimbrial assembly protein (PilN) AMD27_RS14640 PF11104 Type IV pilus assembly protein PilM; AMD27_RS14645 PF17092 Penicillin-binding protein OB-like domain AMD27_RS14645 PF00912 Transglycosylase AMD27_RS14645 PF00905 Penicillin binding protein transpeptidase domain AMD27_RS14650 PF13847 Methyltransferase domain AMD27_RS14655 PF00953 Glycosyl transferase family 4 AMD27_RS14660 PF02875 Mur ligase family, glutamate ligase domain AMD27_RS14660 PF08245 Mur ligase middle domain AMD27_RS14660 PF01225 Mur ligase family, catalytic domain AMD27_RS14665 PF01225 Mur ligase family, catalytic domain AMD27_RS14665 PF02875 Mur ligase family, glutamate ligase domain AMD27_RS14665 PF08245 Mur ligase middle domain AMD27_RS14670 PF00905 Penicillin binding protein transpeptidase domain AMD27_RS14670 PF03717 Penicillin-binding Protein dimerisation domain AMD27_RS14680 PF01795 MraW methylase family AMD27_RS14700 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMD27_RS14720 PF12848 ABC transporter AMD27_RS14720 PF00005 ABC transporter AMD27_RS14725 PF01053 Cys/Met metabolism PLP-dependent enzyme AMD27_RS14730 PF00106 short chain dehydrogenase AMD27_RS14745 PF17674 HHH domain AMD27_RS14745 PF00575 S1 RNA binding domain AMD27_RS14745 PF09371 Tex-like protein N-terminal domain AMD27_RS14745 PF16921 Tex protein YqgF-like domain AMD27_RS14750 PF00072 Response regulator receiver domain AMD27_RS14750 PF00486 Transcriptional regulatory protein, C terminal AMD27_RS14755 PF00512 His Kinase A (phospho-acceptor) domain AMD27_RS14755 PF00672 HAMP domain AMD27_RS14755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD27_RS14760 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AMD27_RS14760 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AMD27_RS14765 PF00583 Acetyltransferase (GNAT) family AMD27_RS14790 PF00475 Imidazoleglycerol-phosphate dehydratase AMD27_RS14795 PF00117 Glutamine amidotransferase class-I AMD27_RS14815 PF00977 Histidine biosynthesis protein AMD27_RS14835 PF00313 'Cold-shock' DNA-binding domain AMD27_RS14840 PF01636 Phosphotransferase enzyme family AMD27_RS14845 PF00977 Histidine biosynthesis protein AMD27_RS14855 PF00230 Major intrinsic protein AMD27_RS14875 PF02705 K+ potassium transporter AMD27_RS14885 PF13356 Arm DNA-binding domain AMD27_RS14885 PF14659 Phage integrase, N-terminal SAM-like domain AMD27_RS14885 PF00589 Phage integrase family AMD27_RS14890 PF04355 SmpA / OmlA family AMD27_RS14890 PF00691 OmpA family AMD27_RS14895 PF05658 Head domain of trimeric autotransporter adhesin AMD27_RS14895 PF05662 Coiled stalk of trimeric autotransporter adhesin AMD27_RS14895 PF13018 Extended Signal Peptide of Type V secretion system AMD27_RS14895 PF03895 YadA-like membrane anchor domain AMD27_RS14900 PF13359 DDE superfamily endonuclease AMD27_RS14900 PF13613 Helix-turn-helix of DDE superfamily endonuclease AMD27_RS14925 PF01593 Flavin containing amine oxidoreductase AMD27_RS14930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD27_RS14930 PF03466 LysR substrate binding domain AMD27_RS14935 PF10417 C-terminal domain of 1-Cys peroxiredoxin AMD27_RS14935 PF00578 AhpC/TSA family AMD27_RS14940 PF00436 Single-strand binding protein family AMD27_RS14945 PF07690 Major Facilitator Superfamily AMD27_RS14955 PF02581 Thiamine monophosphate synthase AMD27_RS14955 PF03070 TENA/THI-4/PQQC family AMD27_RS14955 PF08543 Phosphomethylpyrimidine kinase AMD27_RS14970 PF00005 ABC transporter AMD27_RS14970 PF17760 UvrA interaction domain AMD27_RS14970 PF17755 UvrA DNA-binding domain AMD27_RS14980 PF00892 EamA-like transporter family AMD27_RS14990 PF07690 Major Facilitator Superfamily AMD27_RS14995 PF01638 HxlR-like helix-turn-helix AMD27_RS15015 PF00905 Penicillin binding protein transpeptidase domain AMD27_RS15045 PF00474 Sodium:solute symporter family AMD27_RS15050 PF04341 Protein of unknown function, DUF485 AMD27_RS15055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD27_RS15055 PF00072 Response regulator receiver domain AMD27_RS15055 PF09456 RcsC Alpha-Beta-Loop (ABL) AMD27_RS15055 PF00512 His Kinase A (phospho-acceptor) domain AMD27_RS15065 PF00072 Response regulator receiver domain AMD27_RS15065 PF00196 Bacterial regulatory proteins, luxR family AMD27_RS15070 PF03358 NADPH-dependent FMN reductase AMD27_RS15075 PF00296 Luciferase-like monooxygenase AMD27_RS15080 PF00677 Lumazine binding domain AMD27_RS15085 PF07690 Major Facilitator Superfamily AMD27_RS15100 PF13613 Helix-turn-helix of DDE superfamily endonuclease AMD27_RS15100 PF13359 DDE superfamily endonuclease AMD27_RS15105 PF13359 DDE superfamily endonuclease AMD27_RS15105 PF13613 Helix-turn-helix of DDE superfamily endonuclease AMD27_RS15185 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AMD27_RS15185 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMD27_RS15190 PF13193 AMP-binding enzyme C-terminal domain AMD27_RS15190 PF00501 AMP-binding enzyme AMD27_RS15190 PF16177 Acetyl-coenzyme A synthetase N-terminus AMD27_RS15195 PF00924 Mechanosensitive ion channel AMD27_RS15200 PF04452 RNA methyltransferase AMD27_RS15205 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AMD27_RS15210 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMD27_RS15220 PF03462 PCRF domain AMD27_RS15220 PF00472 RF-1 domain AMD27_RS15225 PF13613 Helix-turn-helix of DDE superfamily endonuclease AMD27_RS15225 PF13359 DDE superfamily endonuclease AMD27_RS15245 PF02272 DHHA1 domain AMD27_RS15245 PF01368 DHH family AMD27_RS15245 PF17768 RecJ OB domain AMD27_RS15250 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AMD27_RS15250 PF01243 Pyridoxamine 5'-phosphate oxidase AMD27_RS15255 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMD27_RS15255 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMD27_RS15255 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMD27_RS15255 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMD27_RS15260 PF00478 IMP dehydrogenase / GMP reductase domain AMD27_RS15260 PF00571 CBS domain AMD27_RS15265 PF03692 Putative zinc- or iron-chelating domain AMD27_RS15270 PF01169 Uncharacterized protein family UPF0016 AMD27_RS15275 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMD27_RS15275 PF02817 e3 binding domain AMD27_RS15275 PF00364 Biotin-requiring enzyme AMD27_RS15280 PF17831 Pyruvate dehydrogenase E1 component middle domain AMD27_RS15280 PF00456 Transketolase, thiamine diphosphate binding domain AMD27_RS15295 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AMD27_RS15300 PF12327 FtsZ family, C-terminal domain AMD27_RS15300 PF00091 Tubulin/FtsZ family, GTPase domain AMD27_RS15305 PF02491 SHS2 domain inserted in FTSA AMD27_RS15310 PF03799 Cell division protein FtsQ AMD27_RS15310 PF08478 POTRA domain, FtsQ-type AMD27_RS15315 PF07478 D-ala D-ala ligase C-terminus AMD27_RS15315 PF01820 D-ala D-ala ligase N-terminus AMD27_RS15320 PF02875 Mur ligase family, glutamate ligase domain AMD27_RS15320 PF01225 Mur ligase family, catalytic domain AMD27_RS15320 PF08245 Mur ligase middle domain AMD27_RS15325 PF04101 Glycosyltransferase family 28 C-terminal domain AMD27_RS15325 PF03033 Glycosyltransferase family 28 N-terminal domain AMD27_RS15330 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AMD27_RS15330 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AMD27_RS15340 PF00156 Phosphoribosyl transferase domain AMD27_RS15345 PF03372 Endonuclease/Exonuclease/phosphatase family AMD27_RS15360 PF07859 alpha/beta hydrolase fold AMD27_RS15365 PF00990 Diguanylate cyclase, GGDEF domain AMD27_RS15395 PF00583 Acetyltransferase (GNAT) family AMD27_RS15410 PF00005 ABC transporter AMD27_RS15415 PF12399 Branched-chain amino acid ATP-binding cassette transporter AMD27_RS15415 PF00005 ABC transporter AMD27_RS15425 PF02653 Branched-chain amino acid transport system / permease component AMD27_RS15435 PF00986 DNA gyrase B subunit, carboxyl terminus AMD27_RS15435 PF00204 DNA gyrase B AMD27_RS15435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD27_RS15435 PF01751 Toprim domain AMD27_RS15440 PF05728 Uncharacterised protein family (UPF0227) AMD27_RS15455 PF02600 Disulfide bond formation protein DsbB AMD27_RS15460 PF04262 Glutamate-cysteine ligase AMD27_RS15475 PF04286 Protein of unknown function (DUF445) AMD27_RS15480 PF03432 Relaxase/Mobilisation nuclease domain AMD27_RS15520 PF00155 Aminotransferase class I and II AMD27_RS15525 PF01554 MatE AMD27_RS15530 PF00106 short chain dehydrogenase AMD27_RS15540 PF00486 Transcriptional regulatory protein, C terminal AMD27_RS15540 PF00072 Response regulator receiver domain AMD27_RS15545 PF11808 Phosphate regulon sensor protein PhoR AMD27_RS15545 PF00512 His Kinase A (phospho-acceptor) domain AMD27_RS15545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD27_RS15545 PF00989 PAS fold AMD27_RS15550 PF02666 Phosphatidylserine decarboxylase AMD27_RS15555 PF00581 Rhodanese-like domain AMD27_RS15560 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AMD27_RS15560 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AMD27_RS15570 PF00199 Catalase AMD27_RS15570 PF06628 Catalase-related immune-responsive AMD27_RS15575 PF02580 D-Tyr-tRNA(Tyr) deacylase AMD27_RS15605 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AMD27_RS15605 PF00925 GTP cyclohydrolase II AMD27_RS15610 PF00885 6,7-dimethyl-8-ribityllumazine synthase AMD27_RS15615 PF01029 NusB family AMD27_RS15620 PF00586 AIR synthase related protein, N-terminal domain AMD27_RS15620 PF02769 AIR synthase related protein, C-terminal domain AMD27_RS15625 PF04608 Phosphatidylglycerophosphatase A AMD27_RS15630 PF12804 MobA-like NTP transferase domain AMD27_RS15630 PF14602 Hexapeptide repeat of succinyl-transferase AMD27_RS15630 PF00132 Bacterial transferase hexapeptide (six repeats) AMD27_RS15635 PF01380 SIS domain AMD27_RS15640 PF08721 TnsA endonuclease C terminal AMD27_RS15640 PF08722 TnsA endonuclease N terminal AMD27_RS15645 PF00665 Integrase core domain AMD27_RS15650 PF13401 AAA domain AMD27_RS15650 PF11426 Tn7 transposition regulator TnsC AMD27_RS15655 PF15978 Tn7-like transposition protein D AMD27_RS15655 PF06527 TniQ AMD27_RS15680 PF02384 N-6 DNA Methylase AMD27_RS15680 PF12161 HsdM N-terminal domain AMD27_RS15685 PF12008 Type I restriction and modification enzyme - subunit R C terminal AMD27_RS15685 PF18766 SWI2/SNF2 ATPase AMD27_RS15685 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AMD27_RS15690 PF01381 Helix-turn-helix AMD27_RS15730 PF01758 Sodium Bile acid symporter family AMD27_RS15735 PF00857 Isochorismatase family AMD27_RS15740 PF00701 Dihydrodipicolinate synthetase family AMD27_RS15750 PF01259 SAICAR synthetase AMD27_RS15755 PF12002 MgsA AAA+ ATPase C terminal AMD27_RS15755 PF00004 ATPase family associated with various cellular activities (AAA) AMD27_RS15755 PF16193 AAA C-terminal domain AMD27_RS15760 PF07995 Glucose / Sorbosone dehydrogenase AMD27_RS15765 PF03692 Putative zinc- or iron-chelating domain AMD27_RS15780 PF00730 HhH-GPD superfamily base excision DNA repair protein AMD27_RS15780 PF14815 NUDIX domain AMD27_RS15780 PF00633 Helix-hairpin-helix motif AMD27_RS15795 PF03352 Methyladenine glycosylase AMD27_RS15810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD27_RS15810 PF03466 LysR substrate binding domain AMD27_RS15815 PF07690 Major Facilitator Superfamily AMD27_RS15825 PF05173 Dihydrodipicolinate reductase, C-terminus AMD27_RS15825 PF01113 Dihydrodipicolinate reductase, N-terminus AMD27_RS15840 PF00696 Amino acid kinase family AMD27_RS15840 PF00583 Acetyltransferase (GNAT) family AMD27_RS15845 PF09084 NMT1/THI5 like AMD27_RS15850 PF09084 NMT1/THI5 like AMD27_RS15855 PF00296 Luciferase-like monooxygenase AMD27_RS15860 PF00528 Binding-protein-dependent transport system inner membrane component AMD27_RS15865 PF00005 ABC transporter AMD27_RS15870 PF17938 Tetracyclin repressor-like, C-terminal domain AMD27_RS15870 PF00440 Bacterial regulatory proteins, tetR family AMD27_RS15880 PF06574 FAD synthetase AMD27_RS15880 PF01687 Riboflavin kinase AMD27_RS15885 PF06827 Zinc finger found in FPG and IleRS AMD27_RS15885 PF00133 tRNA synthetases class I (I, L, M and V) AMD27_RS15885 PF08264 Anticodon-binding domain of tRNA AMD27_RS15890 PF01252 Signal peptidase (SPase) II AMD27_RS15895 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMD27_RS15905 PF01546 Peptidase family M20/M25/M40 AMD27_RS15905 PF07687 Peptidase dimerisation domain AMD27_RS15920 PF04972 BON domain AMD27_RS15920 PF00691 OmpA family AMD27_RS15930 PF06744 Type VI secretion protein IcmF C-terminal AMD27_RS15930 PF14331 ImcF-related N-terminal domain AMD27_RS15930 PF06761 Intracellular multiplication and human macrophage-killing AMD27_RS15945 PF05947 Type VI secretion system, TssF AMD27_RS15960 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath AMD27_RS15975 PF00004 ATPase family associated with various cellular activities (AAA) AMD27_RS15975 PF07724 AAA domain (Cdc48 subfamily) AMD27_RS15975 PF17871 AAA lid domain AMD27_RS15975 PF10431 C-terminal, D2-small domain, of ClpB protein AMD27_RS15980 PF06812 ImpA, N-terminal, type VI secretion system AMD27_RS15985 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE AMD27_RS16045 PF13406 Transglycosylase SLT domain AMD27_RS16050 PF02222 ATP-grasp domain AMD27_RS16050 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AMD27_RS16055 PF00731 AIR carboxylase AMD27_RS16065 PF08245 Mur ligase middle domain AMD27_RS16065 PF02875 Mur ligase family, glutamate ligase domain AMD27_RS16065 PF01225 Mur ligase family, catalytic domain AMD27_RS16085 PF13359 DDE superfamily endonuclease AMD27_RS16085 PF13613 Helix-turn-helix of DDE superfamily endonuclease AMD27_RS16100 PF07690 Major Facilitator Superfamily AMD27_RS16105 PF03741 Integral membrane protein TerC family AMD27_RS16120 PF01979 Amidohydrolase family AMD27_RS16125 PF00156 Phosphoribosyl transferase domain AMD27_RS16135 PF13098 Thioredoxin-like domain AMD27_RS16135 PF10411 Disulfide bond isomerase protein N-terminus AMD27_RS16140 PF07690 Major Facilitator Superfamily AMD27_RS16150 PF12631 MnmE helical domain AMD27_RS16150 PF01926 50S ribosome-binding GTPase AMD27_RS16150 PF10396 GTP-binding protein TrmE N-terminus AMD27_RS16155 PF14849 YidC periplasmic domain AMD27_RS16155 PF02096 60Kd inner membrane protein AMD27_RS16160 PF01809 Putative membrane protein insertion efficiency factor AMD27_RS16165 PF00825 Ribonuclease P AMD27_RS16170 PF00468 Ribosomal protein L34 AMD27_RS16285 PF00012 Hsp70 protein AMD27_RS16320 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AMD27_RS16525 PF03895 YadA-like membrane anchor domain AMD27_RS16525 PF05658 Head domain of trimeric autotransporter adhesin AMD27_RS16525 PF13018 Extended Signal Peptide of Type V secretion system AMD27_RS16525 PF05662 Coiled stalk of trimeric autotransporter adhesin AMD27_RS16600 PF00860 Permease family AMD27_RS16915 PF02678 Pirin AMD27_RS16915 PF05726 Pirin C-terminal cupin domain AMD27_RS16950 PF03485 Arginyl tRNA synthetase N terminal domain AMD27_RS16950 PF05746 DALR anticodon binding domain AMD27_RS16950 PF00750 tRNA synthetases class I (R) AMD27_RS17025 PF04261 Dyp-type peroxidase family AMD27_RS17165 PF02481 DNA recombination-mediator protein A AMD27_RS17165 PF17782 DprA winged helix domain AMD27_RS17170 PF17782 DprA winged helix domain AMD27_RS17170 PF02481 DNA recombination-mediator protein A AMD27_RS17440 PF00501 AMP-binding enzyme AMD27_RS17440 PF13193 AMP-binding enzyme C-terminal domain AMD27_RS17530 PF03739 Lipopolysaccharide export system permease LptF/LptG AMD27_RS17555 PF00072 Response regulator receiver domain AMD27_RS17555 PF00158 Sigma-54 interaction domain AMD27_RS17555 PF02954 Bacterial regulatory protein, Fis family AMD27_RS17600 PF07664 Ferrous iron transport protein B C terminus AMD27_RS17600 PF02421 Ferrous iron transport protein B AMD27_RS17600 PF07670 Nucleoside recognition AMD27_RS17620 PF08245 Mur ligase middle domain AMD27_RS17620 PF02875 Mur ligase family, glutamate ligase domain AMD27_RS17645 PF00149 Calcineurin-like phosphoesterase AMD27_RS17660 PF13667 ThiC-associated domain AMD27_RS17660 PF01964 Radical SAM ThiC family