AMQ28_RS00235	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AMQ28_RS00245	PWY-7560	methylerythritol phosphate pathway II
AMQ28_RS00255	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AMQ28_RS00255	PWY-6164	3-dehydroquinate biosynthesis I
AMQ28_RS00255	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AMQ28_RS00280	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
AMQ28_RS00280	PWY-622	starch biosynthesis
AMQ28_RS00310	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AMQ28_RS00310	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AMQ28_RS00310	PWY-6269	adenosylcobalamin salvage from cobinamide II
AMQ28_RS00315	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AMQ28_RS00315	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AMQ28_RS00315	PWY-6269	adenosylcobalamin salvage from cobinamide II
AMQ28_RS00325	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AMQ28_RS00325	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AMQ28_RS00325	PWY-6269	adenosylcobalamin salvage from cobinamide II
AMQ28_RS00370	PWY-5392	reductive TCA cycle II
AMQ28_RS00370	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AMQ28_RS00370	PWY-5690	TCA cycle II (plants and fungi)
AMQ28_RS00370	PWY-5913	TCA cycle VI (obligate autotrophs)
AMQ28_RS00370	PWY-6728	methylaspartate cycle
AMQ28_RS00370	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMQ28_RS00370	PWY-7254	TCA cycle VII (acetate-producers)
AMQ28_RS00370	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AMQ28_RS00445	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AMQ28_RS00445	PWY-3162	L-tryptophan degradation V (side chain pathway)
AMQ28_RS00445	PWY-5057	L-valine degradation II
AMQ28_RS00445	PWY-5076	L-leucine degradation III
AMQ28_RS00445	PWY-5078	L-isoleucine degradation II
AMQ28_RS00445	PWY-5079	L-phenylalanine degradation III
AMQ28_RS00445	PWY-5082	L-methionine degradation III
AMQ28_RS00445	PWY-5480	pyruvate fermentation to ethanol I
AMQ28_RS00445	PWY-5486	pyruvate fermentation to ethanol II
AMQ28_RS00445	PWY-5751	phenylethanol biosynthesis
AMQ28_RS00445	PWY-6313	serotonin degradation
AMQ28_RS00445	PWY-6333	acetaldehyde biosynthesis I
AMQ28_RS00445	PWY-6342	noradrenaline and adrenaline degradation
AMQ28_RS00445	PWY-6454	vancomycin resistance I
AMQ28_RS00445	PWY-6587	pyruvate fermentation to ethanol III
AMQ28_RS00445	PWY-6802	salidroside biosynthesis
AMQ28_RS00445	PWY-6871	3-methylbutanol biosynthesis
AMQ28_RS00445	PWY-6901	superpathway of glucose and xylose degradation
AMQ28_RS00445	PWY-7013	L-1,2-propanediol degradation
AMQ28_RS00445	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AMQ28_RS00445	PWY-7118	chitin degradation to ethanol
AMQ28_RS00445	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AMQ28_RS00450	PWY-5913	TCA cycle VI (obligate autotrophs)
AMQ28_RS00450	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
AMQ28_RS00450	PWY-6638	sulfolactate degradation III
AMQ28_RS00450	PWY-6642	(<i>R</i>)-cysteate degradation
AMQ28_RS00450	PWY-6643	coenzyme M biosynthesis II
AMQ28_RS00450	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AMQ28_RS00450	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AMQ28_RS00450	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AMQ28_RS00465	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AMQ28_RS00465	PWY-6164	3-dehydroquinate biosynthesis I
AMQ28_RS00465	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AMQ28_RS00555	PWY-5667	CDP-diacylglycerol biosynthesis I
AMQ28_RS00555	PWY-6453	stigma estolide biosynthesis
AMQ28_RS00555	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
AMQ28_RS00555	PWY-7587	oleate biosynthesis III (cyanobacteria)
AMQ28_RS00560	PWY-6936	seleno-amino acid biosynthesis
AMQ28_RS00575	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
AMQ28_RS00580	PWY-1361	benzoyl-CoA degradation I (aerobic)
AMQ28_RS00580	PWY-2361	3-oxoadipate degradation
AMQ28_RS00580	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
AMQ28_RS00625	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
AMQ28_RS00630	PWY-1042	glycolysis IV (plant cytosol)
AMQ28_RS00630	PWY-1622	formaldehyde assimilation I (serine pathway)
AMQ28_RS00630	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AMQ28_RS00630	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMQ28_RS00630	PWY-5723	Rubisco shunt
AMQ28_RS00630	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMQ28_RS00630	PWY-6886	1-butanol autotrophic biosynthesis
AMQ28_RS00630	PWY-6901	superpathway of glucose and xylose degradation
AMQ28_RS00630	PWY-7003	glycerol degradation to butanol
AMQ28_RS00630	PWY-7124	ethylene biosynthesis V (engineered)
AMQ28_RS00630	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AMQ28_RS00695	PWY-4381	fatty acid biosynthesis initiation I
AMQ28_RS00695	PWY-5743	3-hydroxypropanoate cycle
AMQ28_RS00695	PWY-5744	glyoxylate assimilation
AMQ28_RS00695	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AMQ28_RS00695	PWY-6679	jadomycin biosynthesis
AMQ28_RS00695	PWY-6722	candicidin biosynthesis
AMQ28_RS00695	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AMQ28_RS00720	PWY-5642	2,4-dinitrotoluene degradation
AMQ28_RS00720	PWY-6373	acrylate degradation
AMQ28_RS00760	PWY-5796	malonate decarboxylase activation
AMQ28_RS00765	PWY-4381	fatty acid biosynthesis initiation I
AMQ28_RS00765	PWY-6799	fatty acid biosynthesis (plant mitochondria)
AMQ28_RS00765	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AMQ28_RS00875	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AMQ28_RS00875	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AMQ28_RS00875	PWY-6936	seleno-amino acid biosynthesis
AMQ28_RS00875	PWY-702	L-methionine biosynthesis II
AMQ28_RS00910	PWY-5691	urate degradation to allantoin I
AMQ28_RS00910	PWY-7394	urate degradation to allantoin II
AMQ28_RS00970	PWY-6107	chlorosalicylate degradation
AMQ28_RS00970	PWY-6183	salicylate degradation I
AMQ28_RS00970	PWY-6184	methylsalicylate degradation
AMQ28_RS01065	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AMQ28_RS01065	PWY-6416	quinate degradation II
AMQ28_RS01065	PWY-6707	gallate biosynthesis
AMQ28_RS01085	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AMQ28_RS01200	PWY-5747	2-methylcitrate cycle II
AMQ28_RS01240	PWY-6857	retinol biosynthesis
AMQ28_RS01275	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AMQ28_RS01275	PWY-6148	tetrahydromethanopterin biosynthesis
AMQ28_RS01275	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AMQ28_RS01275	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AMQ28_RS01280	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AMQ28_RS01280	PWY-6148	tetrahydromethanopterin biosynthesis
AMQ28_RS01280	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AMQ28_RS01280	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AMQ28_RS01370	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMQ28_RS01385	PWY-3781	aerobic respiration I (cytochrome c)
AMQ28_RS01385	PWY-4521	arsenite oxidation I (respiratory)
AMQ28_RS01385	PWY-6692	Fe(II) oxidation
AMQ28_RS01385	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AMQ28_RS01385	PWY-7544	pyruvate to cytochrome <i>bo</i> oxidase electron transfer
AMQ28_RS01425	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AMQ28_RS01470	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AMQ28_RS01470	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AMQ28_RS01530	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AMQ28_RS01530	PWY-5723	Rubisco shunt
AMQ28_RS01590	PWY-6897	thiamin salvage II
AMQ28_RS01590	PWY-7356	thiamin salvage IV (yeast)
AMQ28_RS01590	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AMQ28_RS01615	PWY-6728	methylaspartate cycle
AMQ28_RS01615	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMQ28_RS01615	PWY-7118	chitin degradation to ethanol
AMQ28_RS01615	PWY-7294	xylose degradation IV
AMQ28_RS01615	PWY-7295	L-arabinose degradation IV
AMQ28_RS01630	PWY-5686	UMP biosynthesis
AMQ28_RS01650	PWY-7205	CMP phosphorylation
AMQ28_RS01720	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AMQ28_RS01785	PWY-2781	<i>cis</i>-zeatin biosynthesis
AMQ28_RS01845	PWY-4381	fatty acid biosynthesis initiation I
AMQ28_RS01910	PWY-723	alkylnitronates degradation
AMQ28_RS01965	PWY-4202	arsenate detoxification I (glutaredoxin)
AMQ28_RS01965	PWY-4621	arsenate detoxification II (glutaredoxin)
AMQ28_RS02070	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AMQ28_RS02075	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AMQ28_RS02075	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AMQ28_RS02075	PWY-6897	thiamin salvage II
AMQ28_RS02075	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
AMQ28_RS02075	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
AMQ28_RS02075	PWY-7356	thiamin salvage IV (yeast)
AMQ28_RS02075	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AMQ28_RS02115	PWY-5386	methylglyoxal degradation I
AMQ28_RS02160	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
AMQ28_RS02160	PWY-5368	dimorphecolate biosynthesis
AMQ28_RS02160	PWY-5995	linoleate biosynthesis I (plants)
AMQ28_RS02160	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
AMQ28_RS02160	PWY-6803	phosphatidylcholine acyl editing
AMQ28_RS02160	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
AMQ28_RS02160	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
AMQ28_RS02160	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
AMQ28_RS02160	PWY-7470	phosphatidylcholine biosynthesis VII
AMQ28_RS02160	PWY-7618	ricinoleate biosynthesis
AMQ28_RS02180	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AMQ28_RS02205	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AMQ28_RS02205	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AMQ28_RS02205	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AMQ28_RS02205	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AMQ28_RS02215	PWY-5686	UMP biosynthesis
AMQ28_RS02235	PWY-5667	CDP-diacylglycerol biosynthesis I
AMQ28_RS02235	PWY-5981	CDP-diacylglycerol biosynthesis III
AMQ28_RS02275	PWY-6891	thiazole biosynthesis II (Bacillus)
AMQ28_RS02275	PWY-6892	thiazole biosynthesis I (E. coli)
AMQ28_RS02325	PWY-5686	UMP biosynthesis
AMQ28_RS02335	PWY-6825	phosphatidylcholine biosynthesis V
AMQ28_RS02380	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AMQ28_RS02405	PWY-2941	L-lysine biosynthesis II
AMQ28_RS02405	PWY-2942	L-lysine biosynthesis III
AMQ28_RS02405	PWY-5097	L-lysine biosynthesis VI
AMQ28_RS02405	PWY-6559	spermidine biosynthesis II
AMQ28_RS02405	PWY-6562	norspermidine biosynthesis
AMQ28_RS02405	PWY-7153	grixazone biosynthesis
AMQ28_RS02435	PWY-6610	adenine and adenosine salvage IV
AMQ28_RS02470	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AMQ28_RS02470	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
AMQ28_RS02475	PWY-3461	L-tyrosine biosynthesis II
AMQ28_RS02475	PWY-3462	L-phenylalanine biosynthesis II
AMQ28_RS02475	PWY-6120	L-tyrosine biosynthesis III
AMQ28_RS02475	PWY-6627	salinosporamide A biosynthesis
AMQ28_RS02475	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
AMQ28_RS02475	PWY-7626	bacilysin biosynthesis
AMQ28_RS02505	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AMQ28_RS02505	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AMQ28_RS02505	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
AMQ28_RS02510	PWY-1001	cellulose biosynthesis
AMQ28_RS02510	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AMQ28_RS02510	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AMQ28_RS02510	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AMQ28_RS02510	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AMQ28_RS02520	PWY-6502	oxidized GTP and dGTP detoxification
AMQ28_RS02520	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AMQ28_RS02520	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AMQ28_RS02520	PWY-6897	thiamin salvage II
AMQ28_RS02520	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
AMQ28_RS02520	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
AMQ28_RS02520	PWY-7356	thiamin salvage IV (yeast)
AMQ28_RS02520	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AMQ28_RS02610	PWY-5392	reductive TCA cycle II
AMQ28_RS02610	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AMQ28_RS02610	PWY-5690	TCA cycle II (plants and fungi)
AMQ28_RS02610	PWY-5913	TCA cycle VI (obligate autotrophs)
AMQ28_RS02610	PWY-6728	methylaspartate cycle
AMQ28_RS02610	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMQ28_RS02610	PWY-7254	TCA cycle VII (acetate-producers)
AMQ28_RS02610	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AMQ28_RS02675	PWY-5386	methylglyoxal degradation I
AMQ28_RS02710	PWY-5381	pyridine nucleotide cycling (plants)
AMQ28_RS02710	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AMQ28_RS02710	PWY-6596	adenosine nucleotides degradation I
AMQ28_RS02710	PWY-6606	guanosine nucleotides degradation II
AMQ28_RS02710	PWY-6607	guanosine nucleotides degradation I
AMQ28_RS02710	PWY-6608	guanosine nucleotides degradation III
AMQ28_RS02710	PWY-7185	UTP and CTP dephosphorylation I
AMQ28_RS02725	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AMQ28_RS02725	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AMQ28_RS02750	PWY-6123	inosine-5'-phosphate biosynthesis I
AMQ28_RS02750	PWY-6124	inosine-5'-phosphate biosynthesis II
AMQ28_RS02750	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AMQ28_RS02750	PWY-7234	inosine-5'-phosphate biosynthesis III
AMQ28_RS02800	PWY-6409	pyoverdine I biosynthesis
AMQ28_RS02800	PWY-6562	norspermidine biosynthesis
AMQ28_RS02800	PWY-761	rhizobactin 1021 biosynthesis
AMQ28_RS02815	PWY-3341	L-proline biosynthesis III
AMQ28_RS02815	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AMQ28_RS02845	PWY-1042	glycolysis IV (plant cytosol)
AMQ28_RS02845	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMQ28_RS02845	PWY-6901	superpathway of glucose and xylose degradation
AMQ28_RS02845	PWY-7003	glycerol degradation to butanol
AMQ28_RS02900	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AMQ28_RS02900	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AMQ28_RS02960	PWY-5316	nicotine biosynthesis
AMQ28_RS02960	PWY-7342	superpathway of nicotine biosynthesis
AMQ28_RS02970	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AMQ28_RS02970	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMQ28_RS02970	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMQ28_RS02970	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
AMQ28_RS02970	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AMQ28_RS02970	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AMQ28_RS02980	PWY-6543	4-aminobenzoate biosynthesis
AMQ28_RS03025	PWY-6703	preQ<sub>0</sub> biosynthesis
AMQ28_RS03030	PWY-6703	preQ<sub>0</sub> biosynthesis
AMQ28_RS03040	PWY-6482	diphthamide biosynthesis (archaea)
AMQ28_RS03040	PWY-7546	diphthamide biosynthesis (eukaryotes)
AMQ28_RS03080	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AMQ28_RS03080	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AMQ28_RS03080	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AMQ28_RS03150	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMQ28_RS03195	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AMQ28_RS03195	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AMQ28_RS03195	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AMQ28_RS03200	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AMQ28_RS03200	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
AMQ28_RS03335	PWY-2941	L-lysine biosynthesis II
AMQ28_RS03335	PWY-5097	L-lysine biosynthesis VI
AMQ28_RS03340	PWY-2941	L-lysine biosynthesis II
AMQ28_RS03340	PWY-2942	L-lysine biosynthesis III
AMQ28_RS03340	PWY-5097	L-lysine biosynthesis VI
AMQ28_RS03400	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AMQ28_RS03405	PWY-2201	folate transformations I
AMQ28_RS03405	PWY-3841	folate transformations II
AMQ28_RS03410	PWY-2201	folate transformations I
AMQ28_RS03420	PWY-1281	sulfoacetaldehyde degradation I
AMQ28_RS03420	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AMQ28_RS03420	PWY-5482	pyruvate fermentation to acetate II
AMQ28_RS03420	PWY-5485	pyruvate fermentation to acetate IV
AMQ28_RS03420	PWY-5497	purine nucleobases degradation II (anaerobic)
AMQ28_RS03420	PWY-6637	sulfolactate degradation II
AMQ28_RS03420	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AMQ28_RS03435	PWY-181	photorespiration
AMQ28_RS03480	PWY-6823	molybdenum cofactor biosynthesis
AMQ28_RS03495	PWY-6823	molybdenum cofactor biosynthesis
AMQ28_RS03505	PWY-6823	molybdenum cofactor biosynthesis
AMQ28_RS03660	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMQ28_RS03705	PWY-6614	tetrahydrofolate biosynthesis
AMQ28_RS03735	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMQ28_RS03735	PWY-5686	UMP biosynthesis
AMQ28_RS03735	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AMQ28_RS03740	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMQ28_RS03740	PWY-5686	UMP biosynthesis
AMQ28_RS03740	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AMQ28_RS03870	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AMQ28_RS03870	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMQ28_RS03870	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AMQ28_RS03870	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AMQ28_RS03910	PWY-2201	folate transformations I
AMQ28_RS03910	PWY-3841	folate transformations II
AMQ28_RS04210	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMQ28_RS04400	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AMQ28_RS04400	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AMQ28_RS04495	PWY-7183	pyrimidine nucleobases salvage I
AMQ28_RS04585	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AMQ28_RS04585	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMQ28_RS04585	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AMQ28_RS04585	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AMQ28_RS04585	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMQ28_RS04585	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMQ28_RS04585	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMQ28_RS04585	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AMQ28_RS04590	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AMQ28_RS04590	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMQ28_RS04590	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AMQ28_RS04590	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AMQ28_RS04590	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMQ28_RS04590	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMQ28_RS04590	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMQ28_RS04590	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AMQ28_RS04620	PWY-5101	L-isoleucine biosynthesis II
AMQ28_RS04620	PWY-5103	L-isoleucine biosynthesis III
AMQ28_RS04620	PWY-5104	L-isoleucine biosynthesis IV
AMQ28_RS04620	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AMQ28_RS04655	PWY-5101	L-isoleucine biosynthesis II
AMQ28_RS04655	PWY-5103	L-isoleucine biosynthesis III
AMQ28_RS04655	PWY-5104	L-isoleucine biosynthesis IV
AMQ28_RS04655	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AMQ28_RS04700	PWY-6683	sulfate reduction III (assimilatory)
AMQ28_RS04730	PWY-1361	benzoyl-CoA degradation I (aerobic)
AMQ28_RS04730	PWY-5109	2-methylbutanoate biosynthesis
AMQ28_RS04730	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AMQ28_RS04730	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AMQ28_RS04730	PWY-5177	glutaryl-CoA degradation
AMQ28_RS04730	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AMQ28_RS04730	PWY-6435	4-hydroxybenzoate biosynthesis V
AMQ28_RS04730	PWY-6583	pyruvate fermentation to butanol I
AMQ28_RS04730	PWY-6863	pyruvate fermentation to hexanol
AMQ28_RS04730	PWY-6883	pyruvate fermentation to butanol II
AMQ28_RS04730	PWY-6944	androstenedione degradation
AMQ28_RS04730	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AMQ28_RS04730	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AMQ28_RS04730	PWY-7007	methyl ketone biosynthesis
AMQ28_RS04730	PWY-7046	4-coumarate degradation (anaerobic)
AMQ28_RS04730	PWY-7094	fatty acid salvage
AMQ28_RS04730	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AMQ28_RS04730	PWY-735	jasmonic acid biosynthesis
AMQ28_RS04730	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AMQ28_RS04730	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AMQ28_RS04730	PWY-7726	AMQ28_RS04730
AMQ28_RS04770	PWY-6825	phosphatidylcholine biosynthesis V
AMQ28_RS04785	PWY-5367	petroselinate biosynthesis
AMQ28_RS04785	PWY-5515	L-arabinose degradation II
AMQ28_RS04785	PWY-5525	D-glucuronate degradation I
AMQ28_RS04785	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AMQ28_RS04785	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AMQ28_RS04785	PWY-5989	stearate biosynthesis II (bacteria and plants)
AMQ28_RS04785	PWY-5994	palmitate biosynthesis I (animals and fungi)
AMQ28_RS04785	PWY-6113	superpathway of mycolate biosynthesis
AMQ28_RS04785	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AMQ28_RS04785	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AMQ28_RS04785	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AMQ28_RS04785	PWY-7663	gondoate biosynthesis (anaerobic)
AMQ28_RS04785	PWY-7664	oleate biosynthesis IV (anaerobic)
AMQ28_RS04785	PWYG-321	mycolate biosynthesis
AMQ28_RS04790	PWY-4381	fatty acid biosynthesis initiation I
AMQ28_RS04790	PWY-6799	fatty acid biosynthesis (plant mitochondria)
AMQ28_RS04790	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AMQ28_RS04835	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
AMQ28_RS04840	PWY-2201	folate transformations I
AMQ28_RS04840	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AMQ28_RS04965	PWY-3961	phosphopantothenate biosynthesis II
AMQ28_RS05040	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AMQ28_RS05040	PWY-5723	Rubisco shunt
AMQ28_RS05050	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AMQ28_RS05065	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
AMQ28_RS05070	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
AMQ28_RS05070	PWY-5368	dimorphecolate biosynthesis
AMQ28_RS05070	PWY-5995	linoleate biosynthesis I (plants)
AMQ28_RS05070	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
AMQ28_RS05070	PWY-6803	phosphatidylcholine acyl editing
AMQ28_RS05070	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
AMQ28_RS05070	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
AMQ28_RS05070	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
AMQ28_RS05070	PWY-7470	phosphatidylcholine biosynthesis VII
AMQ28_RS05070	PWY-7618	ricinoleate biosynthesis
AMQ28_RS05120	PWY-5958	acridone alkaloid biosynthesis
AMQ28_RS05120	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AMQ28_RS05120	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AMQ28_RS05140	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AMQ28_RS05140	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AMQ28_RS05240	PWY-3341	L-proline biosynthesis III
AMQ28_RS05240	PWY-4981	L-proline biosynthesis II (from arginine)
AMQ28_RS05240	PWY-6344	L-ornithine degradation II (Stickland reaction)
AMQ28_RS05250	PWY-4381	fatty acid biosynthesis initiation I
AMQ28_RS05250	PWY-5743	3-hydroxypropanoate cycle
AMQ28_RS05250	PWY-5744	glyoxylate assimilation
AMQ28_RS05250	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AMQ28_RS05250	PWY-6679	jadomycin biosynthesis
AMQ28_RS05250	PWY-6722	candicidin biosynthesis
AMQ28_RS05250	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AMQ28_RS05265	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AMQ28_RS05330	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AMQ28_RS05330	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AMQ28_RS05330	PWY-5989	stearate biosynthesis II (bacteria and plants)
AMQ28_RS05330	PWY-6113	superpathway of mycolate biosynthesis
AMQ28_RS05330	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AMQ28_RS05330	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AMQ28_RS05330	PWY-7663	gondoate biosynthesis (anaerobic)
AMQ28_RS05330	PWY-7664	oleate biosynthesis IV (anaerobic)
AMQ28_RS05330	PWYG-321	mycolate biosynthesis
AMQ28_RS05455	PWY-6902	chitin degradation II
AMQ28_RS05470	PWY-3341	L-proline biosynthesis III
AMQ28_RS05470	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AMQ28_RS05480	PWY-5482	pyruvate fermentation to acetate II
AMQ28_RS05480	PWY-5485	pyruvate fermentation to acetate IV
AMQ28_RS05480	PWY-5497	purine nucleobases degradation II (anaerobic)
AMQ28_RS05485	PWY-1281	sulfoacetaldehyde degradation I
AMQ28_RS05485	PWY-5482	pyruvate fermentation to acetate II
AMQ28_RS05485	PWY-5485	pyruvate fermentation to acetate IV
AMQ28_RS05485	PWY-5497	purine nucleobases degradation II (anaerobic)
AMQ28_RS05485	PWY-6637	sulfolactate degradation II
AMQ28_RS05495	PWY-5392	reductive TCA cycle II
AMQ28_RS05495	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AMQ28_RS05495	PWY-5690	TCA cycle II (plants and fungi)
AMQ28_RS05495	PWY-5913	TCA cycle VI (obligate autotrophs)
AMQ28_RS05495	PWY-6728	methylaspartate cycle
AMQ28_RS05495	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMQ28_RS05495	PWY-7254	TCA cycle VII (acetate-producers)
AMQ28_RS05495	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AMQ28_RS05560	PWY-6871	3-methylbutanol biosynthesis
AMQ28_RS05565	PWY-5344	L-homocysteine biosynthesis
AMQ28_RS05580	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
AMQ28_RS05705	PWY-6654	phosphopantothenate biosynthesis III
AMQ28_RS05710	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AMQ28_RS05710	PWY-6148	tetrahydromethanopterin biosynthesis
AMQ28_RS05710	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AMQ28_RS05710	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AMQ28_RS05730	PWY-6012	acyl carrier protein metabolism I
AMQ28_RS05730	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
AMQ28_RS05770	PWY-2201	folate transformations I
AMQ28_RS05775	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AMQ28_RS05775	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
AMQ28_RS05775	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMQ28_RS05775	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMQ28_RS05775	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
AMQ28_RS05775	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AMQ28_RS05775	PWY-7205	CMP phosphorylation
AMQ28_RS05775	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AMQ28_RS05775	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMQ28_RS05775	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AMQ28_RS05775	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMQ28_RS05775	PWY-7224	purine deoxyribonucleosides salvage
AMQ28_RS05775	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMQ28_RS05775	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AMQ28_RS05820	PWY-5103	L-isoleucine biosynthesis III
AMQ28_RS05820	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AMQ28_RS05825	PWY-5101	L-isoleucine biosynthesis II
AMQ28_RS05825	PWY-5103	L-isoleucine biosynthesis III
AMQ28_RS05825	PWY-5104	L-isoleucine biosynthesis IV
AMQ28_RS05825	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AMQ28_RS05825	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AMQ28_RS05825	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AMQ28_RS05825	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AMQ28_RS05830	PWY-5101	L-isoleucine biosynthesis II
AMQ28_RS05830	PWY-5103	L-isoleucine biosynthesis III
AMQ28_RS05830	PWY-5104	L-isoleucine biosynthesis IV
AMQ28_RS05830	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AMQ28_RS05830	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AMQ28_RS05830	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AMQ28_RS05830	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AMQ28_RS05875	PWY-3841	folate transformations II
AMQ28_RS05875	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMQ28_RS05875	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMQ28_RS05875	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AMQ28_RS05875	PWY-7199	pyrimidine deoxyribonucleosides salvage
AMQ28_RS05875	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AMQ28_RS05880	PWY-3841	folate transformations II
AMQ28_RS05880	PWY-6614	tetrahydrofolate biosynthesis
AMQ28_RS05915	PWY-2201	folate transformations I
AMQ28_RS05915	PWY-5497	purine nucleobases degradation II (anaerobic)
AMQ28_RS06025	PWY-2941	L-lysine biosynthesis II
AMQ28_RS06025	PWY-2942	L-lysine biosynthesis III
AMQ28_RS06025	PWY-5097	L-lysine biosynthesis VI
AMQ28_RS06025	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMQ28_RS06025	PWY-6559	spermidine biosynthesis II
AMQ28_RS06025	PWY-6562	norspermidine biosynthesis
AMQ28_RS06025	PWY-7153	grixazone biosynthesis
AMQ28_RS06025	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AMQ28_RS06070	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AMQ28_RS06335	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AMQ28_RS06370	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AMQ28_RS06370	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AMQ28_RS06505	PWY-5839	menaquinol-7 biosynthesis
AMQ28_RS06505	PWY-5844	menaquinol-9 biosynthesis
AMQ28_RS06505	PWY-5849	menaquinol-6 biosynthesis
AMQ28_RS06505	PWY-5890	menaquinol-10 biosynthesis
AMQ28_RS06505	PWY-5891	menaquinol-11 biosynthesis
AMQ28_RS06505	PWY-5892	menaquinol-12 biosynthesis
AMQ28_RS06505	PWY-5895	menaquinol-13 biosynthesis
AMQ28_RS06610	PWY-1042	glycolysis IV (plant cytosol)
AMQ28_RS06610	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMQ28_RS06610	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMQ28_RS06610	PWY-7003	glycerol degradation to butanol
AMQ28_RS06710	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
AMQ28_RS06740	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AMQ28_RS06740	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AMQ28_RS06805	PWY-1042	glycolysis IV (plant cytosol)
AMQ28_RS06805	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AMQ28_RS06805	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMQ28_RS06805	PWY-5723	Rubisco shunt
AMQ28_RS06805	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMQ28_RS06805	PWY-6886	1-butanol autotrophic biosynthesis
AMQ28_RS06805	PWY-6901	superpathway of glucose and xylose degradation
AMQ28_RS06805	PWY-7003	glycerol degradation to butanol
AMQ28_RS06805	PWY-7124	ethylene biosynthesis V (engineered)
AMQ28_RS06805	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AMQ28_RS06845	PWY-6167	flavin biosynthesis II (archaea)
AMQ28_RS06845	PWY-6168	flavin biosynthesis III (fungi)
AMQ28_RS06845	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AMQ28_RS06855	PWY-5525	D-glucuronate degradation I
AMQ28_RS07105	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AMQ28_RS07115	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AMQ28_RS07235	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AMQ28_RS07480	PWY-5704	urea degradation II
AMQ28_RS07485	PWY-5704	urea degradation II
AMQ28_RS07490	PWY-5704	urea degradation II
AMQ28_RS07580	PWY-4081	glutathione redox reactions I
AMQ28_RS07635	PWY-6167	flavin biosynthesis II (archaea)
AMQ28_RS07635	PWY-6168	flavin biosynthesis III (fungi)
AMQ28_RS07635	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AMQ28_RS07640	PWY-6167	flavin biosynthesis II (archaea)
AMQ28_RS07640	PWY-6168	flavin biosynthesis III (fungi)
AMQ28_RS07650	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AMQ28_RS07650	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AMQ28_RS07650	PWY-6896	thiamin salvage I
AMQ28_RS07650	PWY-6897	thiamin salvage II
AMQ28_RS07655	PWY-5269	cardiolipin biosynthesis II
AMQ28_RS07655	PWY-5668	cardiolipin biosynthesis I
AMQ28_RS07660	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AMQ28_RS07660	PWY-5667	CDP-diacylglycerol biosynthesis I
AMQ28_RS07660	PWY-6453	stigma estolide biosynthesis
AMQ28_RS07660	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
AMQ28_RS07660	PWY-7587	oleate biosynthesis III (cyanobacteria)
AMQ28_RS07665	PWY-6749	CMP-legionaminate biosynthesis I
AMQ28_RS07670	PWY-6749	CMP-legionaminate biosynthesis I
AMQ28_RS07675	PWY-3821	galactose degradation III
AMQ28_RS07675	PWY-6317	galactose degradation I (Leloir pathway)
AMQ28_RS07675	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
AMQ28_RS07675	PWY-6527	stachyose degradation
AMQ28_RS07675	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
AMQ28_RS07675	PWY-7344	UDP-D-galactose biosynthesis
AMQ28_RS07680	PWY-3801	sucrose degradation II (sucrose synthase)
AMQ28_RS07680	PWY-5054	sorbitol biosynthesis I
AMQ28_RS07680	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
AMQ28_RS07680	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AMQ28_RS07680	PWY-5659	GDP-mannose biosynthesis
AMQ28_RS07680	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMQ28_RS07680	PWY-621	sucrose degradation III (sucrose invertase)
AMQ28_RS07680	PWY-622	starch biosynthesis
AMQ28_RS07680	PWY-6981	chitin biosynthesis
AMQ28_RS07680	PWY-6992	1,5-anhydrofructose degradation
AMQ28_RS07680	PWY-7238	sucrose biosynthesis II
AMQ28_RS07680	PWY-7347	sucrose biosynthesis III
AMQ28_RS07680	PWY-7385	1,3-propanediol biosynthesis (engineered)
AMQ28_RS07685	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
AMQ28_RS07690	PWY-3801	sucrose degradation II (sucrose synthase)
AMQ28_RS07690	PWY-6527	stachyose degradation
AMQ28_RS07690	PWY-7238	sucrose biosynthesis II
AMQ28_RS07690	PWY-7343	UDP-glucose biosynthesis
AMQ28_RS07835	PWY-2941	L-lysine biosynthesis II
AMQ28_RS07835	PWY-2942	L-lysine biosynthesis III
AMQ28_RS07835	PWY-5097	L-lysine biosynthesis VI
AMQ28_RS07870	PWY-1622	formaldehyde assimilation I (serine pathway)
AMQ28_RS07870	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AMQ28_RS07870	PWY-5913	TCA cycle VI (obligate autotrophs)
AMQ28_RS07870	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMQ28_RS07870	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
AMQ28_RS07870	PWY-6549	L-glutamine biosynthesis III
AMQ28_RS07870	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AMQ28_RS07870	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AMQ28_RS07870	PWY-7124	ethylene biosynthesis V (engineered)
AMQ28_RS07890	PWY-3461	L-tyrosine biosynthesis II
AMQ28_RS07890	PWY-3462	L-phenylalanine biosynthesis II
AMQ28_RS07890	PWY-6120	L-tyrosine biosynthesis III
AMQ28_RS07890	PWY-6627	salinosporamide A biosynthesis
AMQ28_RS07890	PWY-7626	bacilysin biosynthesis
AMQ28_RS07900	PWY-5101	L-isoleucine biosynthesis II
AMQ28_RS07900	PWY-5103	L-isoleucine biosynthesis III
AMQ28_RS07900	PWY-5104	L-isoleucine biosynthesis IV
AMQ28_RS07900	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AMQ28_RS07905	PWY-5101	L-isoleucine biosynthesis II
AMQ28_RS07905	PWY-5103	L-isoleucine biosynthesis III
AMQ28_RS07905	PWY-5104	L-isoleucine biosynthesis IV
AMQ28_RS07905	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AMQ28_RS07915	PWY-6825	phosphatidylcholine biosynthesis V
AMQ28_RS07970	PWY-5451	acetone degradation I (to methylglyoxal)
AMQ28_RS07970	PWY-6588	pyruvate fermentation to acetone
AMQ28_RS07970	PWY-6876	isopropanol biosynthesis
AMQ28_RS07970	PWY-7466	acetone degradation III (to propane-1,2-diol)
AMQ28_RS08135	PWY-6599	guanine and guanosine salvage II
AMQ28_RS08135	PWY-6609	adenine and adenosine salvage III
AMQ28_RS08135	PWY-6610	adenine and adenosine salvage IV
AMQ28_RS08135	PWY-6620	guanine and guanosine salvage
AMQ28_RS08140	PWY-5497	purine nucleobases degradation II (anaerobic)
AMQ28_RS08140	PWY-6606	guanosine nucleotides degradation II
AMQ28_RS08140	PWY-6608	guanosine nucleotides degradation III
AMQ28_RS08140	PWY-7442	drosopterin and aurodrosopterin biosynthesis
AMQ28_RS08170	PWY-6123	inosine-5'-phosphate biosynthesis I
AMQ28_RS08170	PWY-7234	inosine-5'-phosphate biosynthesis III
AMQ28_RS08245	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
AMQ28_RS08245	PWY-6167	flavin biosynthesis II (archaea)
AMQ28_RS08245	PWY-6168	flavin biosynthesis III (fungi)
AMQ28_RS08305	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMQ28_RS08330	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
AMQ28_RS08330	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
AMQ28_RS08330	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
AMQ28_RS08330	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
AMQ28_RS08330	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
AMQ28_RS08330	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
AMQ28_RS08330	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
AMQ28_RS08330	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
AMQ28_RS08330	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
AMQ28_RS08330	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
AMQ28_RS08360	PWY-5316	nicotine biosynthesis
AMQ28_RS08360	PWY-5381	pyridine nucleotide cycling (plants)
AMQ28_RS08360	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
AMQ28_RS08360	PWY-7342	superpathway of nicotine biosynthesis
AMQ28_RS08390	PWY-6123	inosine-5'-phosphate biosynthesis I
AMQ28_RS08390	PWY-6124	inosine-5'-phosphate biosynthesis II
AMQ28_RS08390	PWY-7234	inosine-5'-phosphate biosynthesis III
AMQ28_RS08400	PWY-2941	L-lysine biosynthesis II
AMQ28_RS08400	PWY-2942	L-lysine biosynthesis III
AMQ28_RS08400	PWY-5097	L-lysine biosynthesis VI
AMQ28_RS08440	PWY-5381	pyridine nucleotide cycling (plants)
AMQ28_RS08450	PWY-5669	phosphatidylethanolamine biosynthesis I
AMQ28_RS08490	PWY-6840	homoglutathione biosynthesis
AMQ28_RS08490	PWY-7255	ergothioneine biosynthesis I (bacteria)
AMQ28_RS08575	PWY-5686	UMP biosynthesis
AMQ28_RS08605	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AMQ28_RS08605	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AMQ28_RS08605	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AMQ28_RS08605	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AMQ28_RS08610	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AMQ28_RS08610	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AMQ28_RS08615	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AMQ28_RS08615	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AMQ28_RS08635	PWY-2201	folate transformations I
AMQ28_RS08635	PWY-5497	purine nucleobases degradation II (anaerobic)
AMQ28_RS08650	PWY-6891	thiazole biosynthesis II (Bacillus)
AMQ28_RS08650	PWY-6892	thiazole biosynthesis I (E. coli)
AMQ28_RS08650	PWY-7560	methylerythritol phosphate pathway II
AMQ28_RS08670	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AMQ28_RS08670	PWY-6596	adenosine nucleotides degradation I
AMQ28_RS08670	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AMQ28_RS08675	PWY-6749	CMP-legionaminate biosynthesis I
AMQ28_RS08680	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AMQ28_RS08680	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AMQ28_RS08710	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
AMQ28_RS08715	PWY-2201	folate transformations I
AMQ28_RS08730	PWY-6672	<i>cis</i>-genanyl-CoA degradation
AMQ28_RS08730	PWY-7118	chitin degradation to ethanol
AMQ28_RS08750	PWY-7723	AMQ28_RS08750
AMQ28_RS08815	PWY-6899	base-degraded thiamin salvage
AMQ28_RS08815	PWY-7356	thiamin salvage IV (yeast)
AMQ28_RS09155	PWY-702	L-methionine biosynthesis II
AMQ28_RS09260	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AMQ28_RS09260	PWY-6435	4-hydroxybenzoate biosynthesis V
AMQ28_RS09260	PWY-6863	pyruvate fermentation to hexanol
AMQ28_RS09260	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AMQ28_RS09260	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AMQ28_RS09260	PWY-6948	sitosterol degradation to androstenedione
AMQ28_RS09260	PWY-7094	fatty acid salvage
AMQ28_RS09260	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
AMQ28_RS09260	PWY-7337	10-<i>cis</i>-heptadecenoyl-CoA degradation (yeast)
AMQ28_RS09260	PWY-7338	10-<i>trans</i>-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
AMQ28_RS09260	PWY-7339	10-<i>trans</i>-heptadecenoyl-CoA degradation (MFE-dependent, yeast)
AMQ28_RS09260	PWY-7340	9-<i>cis</i>, 11-<i>trans</i>-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
AMQ28_RS09260	PWY-735	jasmonic acid biosynthesis
AMQ28_RS09260	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AMQ28_RS09260	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AMQ28_RS09260	PWY-7726	AMQ28_RS09260
AMQ28_RS09265	PWY-1361	benzoyl-CoA degradation I (aerobic)
AMQ28_RS09265	PWY-5109	2-methylbutanoate biosynthesis
AMQ28_RS09265	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AMQ28_RS09265	PWY-5137	fatty acid &beta;-oxidation III (unsaturated, odd number)
AMQ28_RS09265	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AMQ28_RS09265	PWY-5177	glutaryl-CoA degradation
AMQ28_RS09265	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AMQ28_RS09265	PWY-6435	4-hydroxybenzoate biosynthesis V
AMQ28_RS09265	PWY-6583	pyruvate fermentation to butanol I
AMQ28_RS09265	PWY-6837	fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent)
AMQ28_RS09265	PWY-6863	pyruvate fermentation to hexanol
AMQ28_RS09265	PWY-6883	pyruvate fermentation to butanol II
AMQ28_RS09265	PWY-6944	androstenedione degradation
AMQ28_RS09265	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AMQ28_RS09265	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AMQ28_RS09265	PWY-7007	methyl ketone biosynthesis
AMQ28_RS09265	PWY-7046	4-coumarate degradation (anaerobic)
AMQ28_RS09265	PWY-7094	fatty acid salvage
AMQ28_RS09265	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AMQ28_RS09265	PWY-7291	oleate &beta;-oxidation (isomerase-dependent, yeast)
AMQ28_RS09265	PWY-735	jasmonic acid biosynthesis
AMQ28_RS09265	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AMQ28_RS09265	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AMQ28_RS09265	PWY-7726	AMQ28_RS09265
AMQ28_RS09280	PWY-5269	cardiolipin biosynthesis II
AMQ28_RS09280	PWY-5668	cardiolipin biosynthesis I
AMQ28_RS09290	PWY-4983	L-citrulline-nitric oxide cycle
AMQ28_RS09290	PWY-4984	urea cycle
AMQ28_RS09290	PWY-5	canavanine biosynthesis
AMQ28_RS09290	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMQ28_RS09290	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AMQ28_RS09305	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AMQ28_RS09305	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AMQ28_RS09310	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AMQ28_RS09310	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AMQ28_RS09355	PWY-181	photorespiration
AMQ28_RS09360	PWY-5958	acridone alkaloid biosynthesis
AMQ28_RS09360	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AMQ28_RS09360	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AMQ28_RS09535	PWY-5344	L-homocysteine biosynthesis
AMQ28_RS09535	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
AMQ28_RS09655	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AMQ28_RS09675	PWY-2201	folate transformations I
AMQ28_RS09695	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AMQ28_RS09695	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AMQ28_RS09700	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AMQ28_RS09700	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AMQ28_RS09700	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AMQ28_RS09740	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AMQ28_RS09745	PWY-6164	3-dehydroquinate biosynthesis I
AMQ28_RS09830	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AMQ28_RS09885	PWY-6829	tRNA methylation (yeast)
AMQ28_RS09885	PWY-7285	methylwyosine biosynthesis
AMQ28_RS09885	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
AMQ28_RS09960	PWY-6854	ethylene biosynthesis III (microbes)
AMQ28_RS10035	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AMQ28_RS10045	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
AMQ28_RS10045	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
AMQ28_RS10050	PWY-6168	flavin biosynthesis III (fungi)
AMQ28_RS10050	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AMQ28_RS10055	PWY-6891	thiazole biosynthesis II (Bacillus)
AMQ28_RS10055	PWY-6892	thiazole biosynthesis I (E. coli)
AMQ28_RS10055	PWY-7560	methylerythritol phosphate pathway II
AMQ28_RS10125	PWY-5667	CDP-diacylglycerol biosynthesis I
AMQ28_RS10125	PWY-6453	stigma estolide biosynthesis
AMQ28_RS10125	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
AMQ28_RS10125	PWY-7587	oleate biosynthesis III (cyanobacteria)
AMQ28_RS10410	PWY-7731	AMQ28_RS10410
AMQ28_RS10475	PWY-1622	formaldehyde assimilation I (serine pathway)
AMQ28_RS10475	PWY-5392	reductive TCA cycle II
AMQ28_RS10475	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AMQ28_RS10475	PWY-5690	TCA cycle II (plants and fungi)
AMQ28_RS10475	PWY-5913	TCA cycle VI (obligate autotrophs)
AMQ28_RS10475	PWY-6728	methylaspartate cycle
AMQ28_RS10475	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMQ28_RS10475	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AMQ28_RS10475	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AMQ28_RS10505	PWY-5669	phosphatidylethanolamine biosynthesis I
AMQ28_RS10825	PWY-6936	seleno-amino acid biosynthesis
AMQ28_RS10860	PWY-6700	queuosine biosynthesis
AMQ28_RS10875	PWY-6700	queuosine biosynthesis
AMQ28_RS10895	PWY-5057	L-valine degradation II
AMQ28_RS10895	PWY-5076	L-leucine degradation III
AMQ28_RS10895	PWY-5078	L-isoleucine degradation II
AMQ28_RS10895	PWY-5101	L-isoleucine biosynthesis II
AMQ28_RS10895	PWY-5103	L-isoleucine biosynthesis III
AMQ28_RS10895	PWY-5104	L-isoleucine biosynthesis IV
AMQ28_RS10895	PWY-5108	L-isoleucine biosynthesis V
AMQ28_RS10920	PWY-3221	dTDP-L-rhamnose biosynthesis II
AMQ28_RS10920	PWY-6808	dTDP-D-forosamine biosynthesis
AMQ28_RS10920	PWY-6942	dTDP-D-desosamine biosynthesis
AMQ28_RS10920	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
AMQ28_RS10920	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
AMQ28_RS10920	PWY-6974	dTDP-L-olivose biosynthesis
AMQ28_RS10920	PWY-6976	dTDP-L-mycarose biosynthesis
AMQ28_RS10920	PWY-7104	dTDP-L-megosamine biosynthesis
AMQ28_RS10920	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
AMQ28_RS10920	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
AMQ28_RS10920	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
AMQ28_RS10920	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
AMQ28_RS10920	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
AMQ28_RS10920	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
AMQ28_RS10920	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
AMQ28_RS10920	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
AMQ28_RS10920	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
AMQ28_RS10920	PWY-7688	AMQ28_RS10920
AMQ28_RS10930	PWY-3221	dTDP-L-rhamnose biosynthesis II
AMQ28_RS10930	PWY-6808	dTDP-D-forosamine biosynthesis
AMQ28_RS10930	PWY-6942	dTDP-D-desosamine biosynthesis
AMQ28_RS10930	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
AMQ28_RS10930	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
AMQ28_RS10930	PWY-6974	dTDP-L-olivose biosynthesis
AMQ28_RS10930	PWY-6976	dTDP-L-mycarose biosynthesis
AMQ28_RS10930	PWY-7104	dTDP-L-megosamine biosynthesis
AMQ28_RS10930	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
AMQ28_RS10930	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
AMQ28_RS10930	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
AMQ28_RS10930	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
AMQ28_RS10930	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
AMQ28_RS10930	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
AMQ28_RS10930	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
AMQ28_RS10930	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
AMQ28_RS10930	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
AMQ28_RS10930	PWY-7688	AMQ28_RS10930
AMQ28_RS11050	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AMQ28_RS11050	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AMQ28_RS11050	PWY-6268	adenosylcobalamin salvage from cobalamin
AMQ28_RS11050	PWY-6269	adenosylcobalamin salvage from cobinamide II
AMQ28_RS11095	PWY-4381	fatty acid biosynthesis initiation I
AMQ28_RS11095	PWY-5743	3-hydroxypropanoate cycle
AMQ28_RS11095	PWY-5744	glyoxylate assimilation
AMQ28_RS11095	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AMQ28_RS11095	PWY-6679	jadomycin biosynthesis
AMQ28_RS11095	PWY-6722	candicidin biosynthesis
AMQ28_RS11095	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AMQ28_RS11100	PWY-2161	folate polyglutamylation
AMQ28_RS11135	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMQ28_RS11140	PWY-5316	nicotine biosynthesis
AMQ28_RS11140	PWY-7342	superpathway of nicotine biosynthesis
AMQ28_RS11235	PWY-7294	xylose degradation IV
AMQ28_RS11235	PWY-7295	L-arabinose degradation IV
AMQ28_RS11515	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AMQ28_RS11515	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMQ28_RS11515	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMQ28_RS11515	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
AMQ28_RS11520	PWY-6749	CMP-legionaminate biosynthesis I
AMQ28_RS11525	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMQ28_RS11525	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AMQ28_RS11570	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AMQ28_RS11685	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AMQ28_RS11990	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
AMQ28_RS11995	PWY-5194	siroheme biosynthesis
AMQ28_RS11995	PWY-5441	S-methyl-L-methionine cycle
AMQ28_RS11995	PWY-702	L-methionine biosynthesis II
AMQ28_RS11995	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AMQ28_RS12000	PWY-6004	glycine betaine biosynthesis V (from glycine)
AMQ28_RS12020	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AMQ28_RS12020	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AMQ28_RS12060	PWY-5155	&beta;-alanine biosynthesis III
AMQ28_RS12065	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
AMQ28_RS12100	PWY-7560	methylerythritol phosphate pathway II
AMQ28_RS12115	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AMQ28_RS12180	PWY-5381	pyridine nucleotide cycling (plants)
AMQ28_RS12180	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
AMQ28_RS12230	PWY-3781	aerobic respiration I (cytochrome c)
AMQ28_RS12230	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AMQ28_RS12230	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AMQ28_RS12230	PWY-5690	TCA cycle II (plants and fungi)
AMQ28_RS12230	PWY-6728	methylaspartate cycle
AMQ28_RS12230	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMQ28_RS12230	PWY-7254	TCA cycle VII (acetate-producers)
AMQ28_RS12230	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AMQ28_RS12235	PWY-3781	aerobic respiration I (cytochrome c)
AMQ28_RS12235	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AMQ28_RS12235	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AMQ28_RS12235	PWY-5690	TCA cycle II (plants and fungi)
AMQ28_RS12235	PWY-6728	methylaspartate cycle
AMQ28_RS12235	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMQ28_RS12235	PWY-7254	TCA cycle VII (acetate-producers)
AMQ28_RS12235	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AMQ28_RS12245	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AMQ28_RS12250	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AMQ28_RS12255	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
AMQ28_RS12255	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AMQ28_RS12260	PWY-5392	reductive TCA cycle II
AMQ28_RS12260	PWY-5537	pyruvate fermentation to acetate V
AMQ28_RS12260	PWY-5538	pyruvate fermentation to acetate VI
AMQ28_RS12260	PWY-5690	TCA cycle II (plants and fungi)
AMQ28_RS12260	PWY-5913	TCA cycle VI (obligate autotrophs)
AMQ28_RS12260	PWY-6728	methylaspartate cycle
AMQ28_RS12260	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMQ28_RS12260	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AMQ28_RS12265	PWY-5392	reductive TCA cycle II
AMQ28_RS12265	PWY-5537	pyruvate fermentation to acetate V
AMQ28_RS12265	PWY-5538	pyruvate fermentation to acetate VI
AMQ28_RS12265	PWY-5690	TCA cycle II (plants and fungi)
AMQ28_RS12265	PWY-5913	TCA cycle VI (obligate autotrophs)
AMQ28_RS12265	PWY-6728	methylaspartate cycle
AMQ28_RS12265	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMQ28_RS12265	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AMQ28_RS12270	PWY-5278	sulfite oxidation III
AMQ28_RS12270	PWY-5340	sulfate activation for sulfonation
AMQ28_RS12270	PWY-6683	sulfate reduction III (assimilatory)
AMQ28_RS12270	PWY-6932	selenate reduction
AMQ28_RS12275	PWY-5278	sulfite oxidation III
AMQ28_RS12275	PWY-5340	sulfate activation for sulfonation
AMQ28_RS12275	PWY-6683	sulfate reduction III (assimilatory)
AMQ28_RS12275	PWY-6932	selenate reduction
AMQ28_RS12300	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
AMQ28_RS12300	PWY-2201	folate transformations I
AMQ28_RS12300	PWY-3841	folate transformations II
AMQ28_RS12300	PWY-5030	L-histidine degradation III
AMQ28_RS12300	PWY-5497	purine nucleobases degradation II (anaerobic)
AMQ28_RS12300	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
AMQ28_RS12315	PWY-4261	glycerol degradation I
AMQ28_RS12325	PWY-4261	glycerol degradation I
AMQ28_RS12325	PWY-6118	glycerol-3-phosphate shuttle
AMQ28_RS12325	PWY-6952	glycerophosphodiester degradation
AMQ28_RS12330	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AMQ28_RS12335	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AMQ28_RS12335	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AMQ28_RS12335	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
AMQ28_RS12380	PWY-6825	phosphatidylcholine biosynthesis V
AMQ28_RS12400	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AMQ28_RS12435	PWY-6825	phosphatidylcholine biosynthesis V
AMQ28_RS12535	PWY-2201	folate transformations I
AMQ28_RS12555	PWY-5381	pyridine nucleotide cycling (plants)
AMQ28_RS12635	PWY-5686	UMP biosynthesis
AMQ28_RS12645	PWY-4983	L-citrulline-nitric oxide cycle
AMQ28_RS12645	PWY-4984	urea cycle
AMQ28_RS12645	PWY-5	canavanine biosynthesis
AMQ28_RS12645	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMQ28_RS12645	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AMQ28_RS12665	PWY-6454	vancomycin resistance I
AMQ28_RS12665	PWY-6901	superpathway of glucose and xylose degradation
AMQ28_RS12685	PWY-2421	indole-3-acetate degradation VIII (bacterial)
AMQ28_RS12685	PWY-5648	2-nitrobenzoate degradation II
AMQ28_RS12685	PWY-6079	anthranilate degradation I (aerobic)
AMQ28_RS12690	PWY-2421	indole-3-acetate degradation VIII (bacterial)
AMQ28_RS12690	PWY-5648	2-nitrobenzoate degradation II
AMQ28_RS12690	PWY-6079	anthranilate degradation I (aerobic)
AMQ28_RS12705	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
AMQ28_RS12705	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
AMQ28_RS12730	PWY-5663	tetrahydrobiopterin biosynthesis I
AMQ28_RS12730	PWY-5664	tetrahydrobiopterin biosynthesis II
AMQ28_RS12730	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AMQ28_RS12730	PWY-6703	preQ<sub>0</sub> biosynthesis
AMQ28_RS12730	PWY-6983	tetrahydrobiopterin biosynthesis III
AMQ28_RS12730	PWY-7442	drosopterin and aurodrosopterin biosynthesis
AMQ28_RS12750	PWY-5958	acridone alkaloid biosynthesis
AMQ28_RS12750	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AMQ28_RS12750	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AMQ28_RS12760	PWY-381	nitrate reduction II (assimilatory)
AMQ28_RS12760	PWY-5675	nitrate reduction V (assimilatory)
AMQ28_RS12760	PWY-6549	L-glutamine biosynthesis III
AMQ28_RS12760	PWY-6963	ammonia assimilation cycle I
AMQ28_RS12760	PWY-6964	ammonia assimilation cycle II
AMQ28_RS12770	PWY-5755	4-hydroxybenzoate biosynthesis II (microbes)
AMQ28_RS12770	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
AMQ28_RS12770	PWY-6148	tetrahydromethanopterin biosynthesis
AMQ28_RS12780	PWY-6857	retinol biosynthesis
AMQ28_RS12815	PWY-6854	ethylene biosynthesis III (microbes)
AMQ28_RS12890	PWY-6700	queuosine biosynthesis
AMQ28_RS12940	PWY-6857	retinol biosynthesis
AMQ28_RS12945	PWY-1622	formaldehyde assimilation I (serine pathway)
AMQ28_RS12945	PWY-181	photorespiration
AMQ28_RS12945	PWY-2161	folate polyglutamylation
AMQ28_RS12945	PWY-2201	folate transformations I
AMQ28_RS12945	PWY-3661	glycine betaine degradation I
AMQ28_RS12945	PWY-3661-1	glycine betaine degradation II (mammalian)
AMQ28_RS12945	PWY-3841	folate transformations II
AMQ28_RS12945	PWY-5497	purine nucleobases degradation II (anaerobic)
AMQ28_RS12965	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AMQ28_RS12965	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AMQ28_RS12975	PWY-5913	TCA cycle VI (obligate autotrophs)
AMQ28_RS12975	PWY-6549	L-glutamine biosynthesis III
AMQ28_RS12975	PWY-6728	methylaspartate cycle
AMQ28_RS12975	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMQ28_RS12975	PWY-7124	ethylene biosynthesis V (engineered)
AMQ28_RS12975	PWY-7254	TCA cycle VII (acetate-producers)
AMQ28_RS12975	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AMQ28_RS13310	PWY-5913	TCA cycle VI (obligate autotrophs)
AMQ28_RS13310	PWY-6549	L-glutamine biosynthesis III
AMQ28_RS13310	PWY-6728	methylaspartate cycle
AMQ28_RS13310	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMQ28_RS13310	PWY-7124	ethylene biosynthesis V (engineered)
AMQ28_RS13310	PWY-7254	TCA cycle VII (acetate-producers)
AMQ28_RS13310	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AMQ28_RS13435	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
AMQ28_RS13440	PWY-6700	queuosine biosynthesis
AMQ28_RS13445	PWY-6938	NADH repair
AMQ28_RS13480	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AMQ28_RS13480	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
AMQ28_RS13485	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AMQ28_RS13485	PWY-5723	Rubisco shunt
AMQ28_RS13485	PWY-6891	thiazole biosynthesis II (Bacillus)
AMQ28_RS13485	PWY-6892	thiazole biosynthesis I (E. coli)
AMQ28_RS13485	PWY-6901	superpathway of glucose and xylose degradation
AMQ28_RS13485	PWY-7560	methylerythritol phosphate pathway II
AMQ28_RS13550	PWY-6683	sulfate reduction III (assimilatory)
AMQ28_RS13570	PWY-6823	molybdenum cofactor biosynthesis
AMQ28_RS13580	PWY-6823	molybdenum cofactor biosynthesis
AMQ28_RS13630	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AMQ28_RS13630	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AMQ28_RS13700	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AMQ28_RS13725	PWY-6936	seleno-amino acid biosynthesis
AMQ28_RS13725	PWY-7274	D-cycloserine biosynthesis
AMQ28_RS13730	PWY-6004	glycine betaine biosynthesis V (from glycine)
AMQ28_RS13755	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AMQ28_RS13755	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AMQ28_RS13755	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AMQ28_RS13760	PWY-6123	inosine-5'-phosphate biosynthesis I
AMQ28_RS13760	PWY-6124	inosine-5'-phosphate biosynthesis II
AMQ28_RS13760	PWY-7234	inosine-5'-phosphate biosynthesis III
AMQ28_RS13830	PWY-5667	CDP-diacylglycerol biosynthesis I
AMQ28_RS13830	PWY-5981	CDP-diacylglycerol biosynthesis III
AMQ28_RS13835	PWY-7294	xylose degradation IV
AMQ28_RS13835	PWY-7295	L-arabinose degradation IV
AMQ28_RS13835	PWY-7560	methylerythritol phosphate pathway II
AMQ28_RS13860	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AMQ28_RS13860	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AMQ28_RS13860	PWY-5989	stearate biosynthesis II (bacteria and plants)
AMQ28_RS13860	PWY-5994	palmitate biosynthesis I (animals and fungi)
AMQ28_RS13860	PWY-6113	superpathway of mycolate biosynthesis
AMQ28_RS13860	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AMQ28_RS13860	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AMQ28_RS13860	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AMQ28_RS13860	PWY-7663	gondoate biosynthesis (anaerobic)
AMQ28_RS13860	PWY-7664	oleate biosynthesis IV (anaerobic)
AMQ28_RS13860	PWYG-321	mycolate biosynthesis
AMQ28_RS13940	PWY-1042	glycolysis IV (plant cytosol)
AMQ28_RS13940	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMQ28_RS13940	PWY-6886	1-butanol autotrophic biosynthesis
AMQ28_RS13940	PWY-6901	superpathway of glucose and xylose degradation
AMQ28_RS13940	PWY-7003	glycerol degradation to butanol
AMQ28_RS13950	PWY-1042	glycolysis IV (plant cytosol)
AMQ28_RS13950	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AMQ28_RS13950	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMQ28_RS13950	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMQ28_RS13950	PWY-7385	1,3-propanediol biosynthesis (engineered)
AMQ28_RS13975	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AMQ28_RS14075	PWY-6823	molybdenum cofactor biosynthesis
AMQ28_RS14075	PWY-6891	thiazole biosynthesis II (Bacillus)
AMQ28_RS14075	PWY-6892	thiazole biosynthesis I (E. coli)
AMQ28_RS14075	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AMQ28_RS14145	PWY-6803	phosphatidylcholine acyl editing
AMQ28_RS14145	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
AMQ28_RS14145	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
AMQ28_RS14145	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
AMQ28_RS14170	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AMQ28_RS14170	PWY-5723	Rubisco shunt
AMQ28_RS14180	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMQ28_RS14180	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AMQ28_RS14205	PWY-4981	L-proline biosynthesis II (from arginine)
AMQ28_RS14205	PWY-4984	urea cycle
AMQ28_RS14205	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AMQ28_RS14215	PWY-5747	2-methylcitrate cycle II
AMQ28_RS14235	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
AMQ28_RS14235	PWY-7177	UTP and CTP dephosphorylation II
AMQ28_RS14235	PWY-7185	UTP and CTP dephosphorylation I
AMQ28_RS14240	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AMQ28_RS14240	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AMQ28_RS14245	PWY-1042	glycolysis IV (plant cytosol)
AMQ28_RS14245	PWY-1622	formaldehyde assimilation I (serine pathway)
AMQ28_RS14245	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AMQ28_RS14245	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMQ28_RS14245	PWY-5723	Rubisco shunt
AMQ28_RS14245	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMQ28_RS14245	PWY-6886	1-butanol autotrophic biosynthesis
AMQ28_RS14245	PWY-6901	superpathway of glucose and xylose degradation
AMQ28_RS14245	PWY-7003	glycerol degradation to butanol
AMQ28_RS14245	PWY-7124	ethylene biosynthesis V (engineered)
AMQ28_RS14245	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AMQ28_RS14255	PWY-7560	methylerythritol phosphate pathway II
