locus-tag class description CDG55_RS00050 PF02796 Helix-turn-helix domain of resolvase CDG55_RS00050 PF00239 Resolvase, N terminal domain CDG55_RS00055 PF01051 Initiator Replication protein CDG55_RS00070 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system CDG55_RS00105 PF00893 Small Multidrug Resistance protein CDG55_RS00115 PF01051 Initiator Replication protein CDG55_RS00145 PF03432 Relaxase/Mobilisation nuclease domain CDG55_RS00185 PF02661 Fic/DOC family CDG55_RS00215 PF13086 AAA domain CDG55_RS00215 PF13086 AAA domain CDG55_RS00215 PF13087 AAA domain CDG55_RS00215 PF13195 Protein of unknown function (DUF4011) CDG55_RS00215 PF13087 AAA domain CDG55_RS00215 PF13195 Protein of unknown function (DUF4011) CDG55_RS00295 PF13356 Arm DNA-binding domain CDG55_RS00295 PF00589 Phage integrase family CDG55_RS00320 PF02522 Aminoglycoside 3-N-acetyltransferase CDG55_RS00370 PF00905 Penicillin binding protein transpeptidase domain CDG55_RS00385 PF01381 Helix-turn-helix CDG55_RS00390 PF05973 Phage derived protein Gp49-like (DUF891) CDG55_RS00395 PF00665 Integrase core domain CDG55_RS00395 PF13936 Helix-turn-helix domain CDG55_RS00415 PF00118 TCP-1/cpn60 chaperonin family CDG55_RS00420 PF00166 Chaperonin 10 Kd subunit CDG55_RS00425 PF03091 CutA1 divalent ion tolerance protein CDG55_RS00430 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CDG55_RS00435 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CDG55_RS00445 PF00753 Metallo-beta-lactamase superfamily CDG55_RS00450 PF00665 Integrase core domain CDG55_RS00450 PF13936 Helix-turn-helix domain CDG55_RS00480 PF13610 DDE domain CDG55_RS00495 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CDG55_RS00495 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CDG55_RS00495 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CDG55_RS00495 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CDG55_RS00500 PF00809 Pterin binding enzyme CDG55_RS00515 PF13610 DDE domain CDG55_RS00525 PF03466 LysR substrate binding domain CDG55_RS00525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDG55_RS00530 PF13610 DDE domain CDG55_RS00575 PF17762 HTH domain found in ParB protein CDG55_RS00575 PF02195 ParB-like nuclease domain CDG55_RS00580 PF13614 AAA domain CDG55_RS00590 PF02384 N-6 DNA Methylase CDG55_RS00605 PF11867 Domain of unknown function (DUF3387) CDG55_RS00605 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CDG55_RS00605 PF18766 SWI2/SNF2 ATPase CDG55_RS00625 PF02661 Fic/DOC family CDG55_RS00655 PF00817 impB/mucB/samB family CDG55_RS00655 PF13438 Domain of unknown function (DUF4113) CDG55_RS00655 PF11799 impB/mucB/samB family C-terminal domain CDG55_RS00660 PF01726 LexA DNA binding domain CDG55_RS00660 PF00717 Peptidase S24-like CDG55_RS00675 PF13340 Putative transposase of IS4/5 family (DUF4096) CDG55_RS00680 PF05199 GMC oxidoreductase CDG55_RS00685 PF00171 Aldehyde dehydrogenase family CDG55_RS00690 PF12833 Helix-turn-helix domain CDG55_RS00690 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CDG55_RS00700 PF13340 Putative transposase of IS4/5 family (DUF4096) CDG55_RS00710 PF00589 Phage integrase family CDG55_RS00710 PF13356 Arm DNA-binding domain CDG55_RS00740 PF13610 DDE domain CDG55_RS00745 PF03601 Conserved hypothetical protein 698 CDG55_RS00750 PF03466 LysR substrate binding domain CDG55_RS00750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDG55_RS00805 PF01545 Cation efflux family CDG55_RS00810 PF13411 MerR HTH family regulatory protein CDG55_RS00840 PF13635 Domain of unknown function (DUF4143) CDG55_RS00840 PF13173 AAA domain CDG55_RS00915 PF00239 Resolvase, N terminal domain CDG55_RS00915 PF02796 Helix-turn-helix domain of resolvase CDG55_RS00935 PF00111 2Fe-2S iron-sulfur cluster binding domain CDG55_RS00945 PF00376 MerR family regulatory protein CDG55_RS00945 PF09278 MerR, DNA binding CDG55_RS00950 PF00403 Heavy-metal-associated domain CDG55_RS00955 PF01022 Bacterial regulatory protein, arsR family CDG55_RS00965 PF01545 Cation efflux family CDG55_RS00985 PF01636 Phosphotransferase enzyme family CDG55_RS00990 PF00005 ABC transporter CDG55_RS00990 PF12848 ABC transporter CDG55_RS01030 PF12833 Helix-turn-helix domain CDG55_RS01040 PF00905 Penicillin binding protein transpeptidase domain CDG55_RS01085 PF01348 Type II intron maturase CDG55_RS01085 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CDG55_RS01110 PF13610 DDE domain CDG55_RS01115 PF00376 MerR family regulatory protein CDG55_RS01115 PF09278 MerR, DNA binding CDG55_RS01120 PF02411 MerT mercuric transport protein CDG55_RS01125 PF00403 Heavy-metal-associated domain CDG55_RS01130 PF03203 MerC mercury resistance protein CDG55_RS01135 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDG55_RS01135 PF00403 Heavy-metal-associated domain CDG55_RS01135 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDG55_RS01140 PF13411 MerR HTH family regulatory protein CDG55_RS01145 PF05052 MerE protein CDG55_RS01155 PF00563 EAL domain CDG55_RS01155 PF11809 Domain of unknown function (DUF3330) CDG55_RS01170 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CDG55_RS01175 PF08299 Bacterial dnaA protein helix-turn-helix CDG55_RS01175 PF00308 Bacterial dnaA protein CDG55_RS01175 PF11638 DnaA N-terminal domain CDG55_RS01180 PF02768 DNA polymerase III beta subunit, C-terminal domain CDG55_RS01180 PF00712 DNA polymerase III beta subunit, N-terminal domain CDG55_RS01180 PF02767 DNA polymerase III beta subunit, central domain CDG55_RS01185 PF02463 RecF/RecN/SMC N terminal domain CDG55_RS01190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDG55_RS01190 PF18053 DNA gyrase B subunit insert domain CDG55_RS01190 PF00986 DNA gyrase B subunit, carboxyl terminus CDG55_RS01190 PF00204 DNA gyrase B CDG55_RS01190 PF01751 Toprim domain CDG55_RS01195 PF09335 SNARE associated Golgi protein CDG55_RS01200 PF00005 ABC transporter CDG55_RS01200 PF12848 ABC transporter CDG55_RS01230 PF01521 Iron-sulphur cluster biosynthesis CDG55_RS01235 PF03702 Anhydro-N-acetylmuramic acid kinase CDG55_RS01240 PF00579 tRNA synthetases class I (W and Y) CDG55_RS01275 PF13737 Transposase DDE domain CDG55_RS01295 PF00171 Aldehyde dehydrogenase family CDG55_RS01300 PF00209 Sodium:neurotransmitter symporter family CDG55_RS01310 PF01189 16S rRNA methyltransferase RsmB/F CDG55_RS01310 PF01029 NusB family CDG55_RS01315 PF02911 Formyl transferase, C-terminal domain CDG55_RS01315 PF00551 Formyl transferase CDG55_RS01320 PF00920 Dehydratase family CDG55_RS01330 PF00860 Permease family CDG55_RS01335 PF00311 Phosphoenolpyruvate carboxylase CDG55_RS01350 PF00873 AcrB/AcrD/AcrF family CDG55_RS01360 PF00684 DnaJ central domain CDG55_RS01360 PF01556 DnaJ C terminal domain CDG55_RS01360 PF00226 DnaJ domain CDG55_RS01365 PF05173 Dihydrodipicolinate reductase, C-terminus CDG55_RS01365 PF01113 Dihydrodipicolinate reductase, N-terminus CDG55_RS01375 PF03466 LysR substrate binding domain CDG55_RS01375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDG55_RS01385 PF08240 Alcohol dehydrogenase GroES-like domain CDG55_RS01385 PF00107 Zinc-binding dehydrogenase CDG55_RS01390 PF03352 Methyladenine glycosylase CDG55_RS01405 PF10576 Iron-sulfur binding domain of endonuclease III CDG55_RS01405 PF00633 Helix-hairpin-helix motif CDG55_RS01405 PF00730 HhH-GPD superfamily base excision DNA repair protein CDG55_RS01405 PF14815 NUDIX domain CDG55_RS01415 PF07043 Protein of unknown function (DUF1328) CDG55_RS01420 PF03692 Putative zinc- or iron-chelating domain CDG55_RS01430 PF00004 ATPase family associated with various cellular activities (AAA) CDG55_RS01430 PF16193 AAA C-terminal domain CDG55_RS01430 PF12002 MgsA AAA+ ATPase C terminal CDG55_RS01450 PF01259 SAICAR synthetase CDG55_RS01460 PF00701 Dihydrodipicolinate synthetase family CDG55_RS01465 PF00857 Isochorismatase family CDG55_RS01470 PF01037 Lrp/AsnC ligand binding domain CDG55_RS01480 PF01380 SIS domain CDG55_RS01485 PF12804 MobA-like NTP transferase domain CDG55_RS01485 PF14602 Hexapeptide repeat of succinyl-transferase CDG55_RS01485 PF00132 Bacterial transferase hexapeptide (six repeats) CDG55_RS01490 PF04608 Phosphatidylglycerophosphatase A CDG55_RS01495 PF00586 AIR synthase related protein, N-terminal domain CDG55_RS01495 PF02769 AIR synthase related protein, C-terminal domain CDG55_RS01500 PF01029 NusB family CDG55_RS01505 PF00885 6,7-dimethyl-8-ribityllumazine synthase CDG55_RS01510 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CDG55_RS01510 PF00925 GTP cyclohydrolase II CDG55_RS01535 PF02580 D-Tyr-tRNA(Tyr) deacylase CDG55_RS01540 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CDG55_RS01540 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CDG55_RS01545 PF00581 Rhodanese-like domain CDG55_RS01550 PF02666 Phosphatidylserine decarboxylase CDG55_RS01575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDG55_RS01575 PF00512 His Kinase A (phospho-acceptor) domain CDG55_RS01575 PF00989 PAS fold CDG55_RS01575 PF11808 Phosphate regulon sensor protein PhoR CDG55_RS01580 PF00072 Response regulator receiver domain CDG55_RS01580 PF00486 Transcriptional regulatory protein, C terminal CDG55_RS01590 PF00106 short chain dehydrogenase CDG55_RS01595 PF01554 MatE CDG55_RS01600 PF00155 Aminotransferase class I and II CDG55_RS01610 PF04286 Protein of unknown function (DUF445) CDG55_RS01625 PF04262 Glutamate-cysteine ligase CDG55_RS01630 PF02600 Disulfide bond formation protein DsbB CDG55_RS01645 PF05728 Uncharacterised protein family (UPF0227) CDG55_RS01650 PF01751 Toprim domain CDG55_RS01650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDG55_RS01650 PF00986 DNA gyrase B subunit, carboxyl terminus CDG55_RS01650 PF00204 DNA gyrase B CDG55_RS01660 PF02653 Branched-chain amino acid transport system / permease component CDG55_RS01670 PF12399 Branched-chain amino acid ATP-binding cassette transporter CDG55_RS01670 PF00005 ABC transporter CDG55_RS01675 PF00005 ABC transporter CDG55_RS01705 PF11412 Disulphide bond corrector protein DsbC CDG55_RS01705 PF02683 Cytochrome C biogenesis protein transmembrane region CDG55_RS01715 PF00990 Diguanylate cyclase, GGDEF domain CDG55_RS01715 PF17151 Periplasmic sensor domain CDG55_RS01720 PF07859 alpha/beta hydrolase fold CDG55_RS01730 PF03960 ArsC family CDG55_RS01735 PF03372 Endonuclease/Exonuclease/phosphatase family CDG55_RS01740 PF00156 Phosphoribosyl transferase domain CDG55_RS01750 PF13391 HNH endonuclease CDG55_RS01755 PF00145 C-5 cytosine-specific DNA methylase CDG55_RS01765 PF01047 MarR family CDG55_RS01770 PF00255 Glutathione peroxidase CDG55_RS01775 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CDG55_RS01775 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CDG55_RS01780 PF04101 Glycosyltransferase family 28 C-terminal domain CDG55_RS01780 PF03033 Glycosyltransferase family 28 N-terminal domain CDG55_RS01785 PF08245 Mur ligase middle domain CDG55_RS01785 PF01225 Mur ligase family, catalytic domain CDG55_RS01785 PF02875 Mur ligase family, glutamate ligase domain CDG55_RS01790 PF01820 D-ala D-ala ligase N-terminus CDG55_RS01790 PF07478 D-ala D-ala ligase C-terminus CDG55_RS01795 PF08478 POTRA domain, FtsQ-type CDG55_RS01795 PF03799 Cell division protein FtsQ CDG55_RS01800 PF02491 SHS2 domain inserted in FTSA CDG55_RS01805 PF12327 FtsZ family, C-terminal domain CDG55_RS01805 PF00091 Tubulin/FtsZ family, GTPase domain CDG55_RS01810 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CDG55_RS01825 PF00456 Transketolase, thiamine diphosphate binding domain CDG55_RS01825 PF17831 Pyruvate dehydrogenase E1 component middle domain CDG55_RS01830 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CDG55_RS01830 PF00364 Biotin-requiring enzyme CDG55_RS01830 PF02817 e3 binding domain CDG55_RS01845 PF01169 Uncharacterized protein family UPF0016 CDG55_RS01850 PF00258 Flavodoxin CDG55_RS01850 PF01613 Flavin reductase like domain CDG55_RS01855 PF03692 Putative zinc- or iron-chelating domain CDG55_RS01860 PF00571 CBS domain CDG55_RS01860 PF00478 IMP dehydrogenase / GMP reductase domain CDG55_RS01865 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CDG55_RS01865 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CDG55_RS01865 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CDG55_RS01865 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CDG55_RS01870 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CDG55_RS01870 PF01243 Pyridoxamine 5'-phosphate oxidase CDG55_RS01875 PF17768 RecJ OB domain CDG55_RS01875 PF02272 DHHA1 domain CDG55_RS01875 PF01368 DHH family CDG55_RS01895 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CDG55_RS01905 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CDG55_RS01910 PF04452 RNA methyltransferase CDG55_RS01915 PF00924 Mechanosensitive ion channel CDG55_RS01925 PF13193 AMP-binding enzyme C-terminal domain CDG55_RS01925 PF16177 Acetyl-coenzyme A synthetase N-terminus CDG55_RS01925 PF00501 AMP-binding enzyme CDG55_RS01930 PF00857 Isochorismatase family CDG55_RS01935 PF01037 Lrp/AsnC ligand binding domain CDG55_RS01940 PF00296 Luciferase-like monooxygenase CDG55_RS01945 PF03358 NADPH-dependent FMN reductase CDG55_RS01950 PF00196 Bacterial regulatory proteins, luxR family CDG55_RS01950 PF00072 Response regulator receiver domain CDG55_RS01970 PF17760 UvrA interaction domain CDG55_RS01970 PF17755 UvrA DNA-binding domain CDG55_RS01985 PF08543 Phosphomethylpyrimidine kinase CDG55_RS01985 PF03070 TENA/THI-4/PQQC family CDG55_RS01985 PF02581 Thiamine monophosphate synthase CDG55_RS01995 PF07690 Major Facilitator Superfamily CDG55_RS02000 PF00436 Single-strand binding protein family CDG55_RS02005 PF02678 Pirin CDG55_RS02005 PF05726 Pirin C-terminal cupin domain CDG55_RS02010 PF01593 Flavin containing amine oxidoreductase CDG55_RS02035 PF13784 Fic/DOC family N-terminal CDG55_RS02035 PF02661 Fic/DOC family CDG55_RS02115 PF01648 4'-phosphopantetheinyl transferase superfamily CDG55_RS02180 PF14659 Phage integrase, N-terminal SAM-like domain CDG55_RS02180 PF13356 Arm DNA-binding domain CDG55_RS02180 PF00589 Phage integrase family CDG55_RS02190 PF02705 K+ potassium transporter CDG55_RS02215 PF00977 Histidine biosynthesis protein CDG55_RS02220 PF01636 Phosphotransferase enzyme family CDG55_RS02235 PF03992 Antibiotic biosynthesis monooxygenase CDG55_RS02250 PF00977 Histidine biosynthesis protein CDG55_RS02260 PF00117 Glutamine amidotransferase class-I CDG55_RS02265 PF00475 Imidazoleglycerol-phosphate dehydratase CDG55_RS02290 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CDG55_RS02290 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CDG55_RS02295 PF00672 HAMP domain CDG55_RS02295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDG55_RS02295 PF00512 His Kinase A (phospho-acceptor) domain CDG55_RS02300 PF00486 Transcriptional regulatory protein, C terminal CDG55_RS02300 PF00072 Response regulator receiver domain CDG55_RS02305 PF09371 Tex-like protein N-terminal domain CDG55_RS02305 PF00575 S1 RNA binding domain CDG55_RS02305 PF16921 Tex protein YqgF-like domain CDG55_RS02305 PF17674 HHH domain CDG55_RS02325 PF00106 short chain dehydrogenase CDG55_RS02330 PF01053 Cys/Met metabolism PLP-dependent enzyme CDG55_RS02335 PF00005 ABC transporter CDG55_RS02335 PF12848 ABC transporter CDG55_RS02350 PF00529 HlyD membrane-fusion protein of T1SS CDG55_RS02350 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CDG55_RS02355 PF00873 AcrB/AcrD/AcrF family CDG55_RS02360 PF01545 Cation efflux family CDG55_RS02390 PF00324 Amino acid permease CDG55_RS02405 PF00749 tRNA synthetases class I (E and Q), catalytic domain CDG55_RS02420 PF01795 MraW methylase family CDG55_RS02430 PF03717 Penicillin-binding Protein dimerisation domain CDG55_RS02430 PF00905 Penicillin binding protein transpeptidase domain CDG55_RS02435 PF01225 Mur ligase family, catalytic domain CDG55_RS02435 PF08245 Mur ligase middle domain CDG55_RS02435 PF02875 Mur ligase family, glutamate ligase domain CDG55_RS02440 PF01225 Mur ligase family, catalytic domain CDG55_RS02440 PF02875 Mur ligase family, glutamate ligase domain CDG55_RS02440 PF08245 Mur ligase middle domain CDG55_RS02445 PF00953 Glycosyl transferase family 4 CDG55_RS02450 PF13847 Methyltransferase domain CDG55_RS02455 PF17092 Penicillin-binding protein OB-like domain CDG55_RS02455 PF00912 Transglycosylase CDG55_RS02455 PF00905 Penicillin binding protein transpeptidase domain CDG55_RS02460 PF11104 Type IV pilus assembly protein PilM; CDG55_RS02465 PF05137 Fimbrial assembly protein (PilN) CDG55_RS02470 PF04350 Pilus assembly protein, PilO CDG55_RS02480 PF00263 Bacterial type II and III secretion system protein CDG55_RS02480 PF07660 Secretin and TonB N terminus short domain CDG55_RS02480 PF03958 Bacterial type II/III secretion system short domain CDG55_RS02480 PF11741 AMIN domain CDG55_RS02485 PF01202 Shikimate kinase CDG55_RS02490 PF01761 3-dehydroquinate synthase CDG55_RS02505 PF04898 Glutamate synthase central domain CDG55_RS02505 PF01645 Conserved region in glutamate synthase CDG55_RS02505 PF01493 GXGXG motif CDG55_RS02505 PF00310 Glutamine amidotransferases class-II CDG55_RS02510 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDG55_RS02510 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CDG55_RS02520 PF04011 LemA family CDG55_RS02525 PF04536 TPM domain CDG55_RS02535 PF07963 Prokaryotic N-terminal methylation motif CDG55_RS02535 PF00114 Pilin (bacterial filament) CDG55_RS02545 PF00535 Glycosyl transferase family 2 CDG55_RS02550 PF00005 ABC transporter CDG55_RS02550 PF00664 ABC transporter transmembrane region CDG55_RS02555 PF16363 GDP-mannose 4,6 dehydratase CDG55_RS02560 PF00483 Nucleotidyl transferase CDG55_RS02565 PF05523 WxcM-like, C-terminal CDG55_RS02585 PF13193 AMP-binding enzyme C-terminal domain CDG55_RS02585 PF00501 AMP-binding enzyme CDG55_RS02600 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CDG55_RS02610 PF00535 Glycosyl transferase family 2 CDG55_RS02620 PF03275 UDP-galactopyranose mutase CDG55_RS02630 PF00534 Glycosyl transferases group 1 CDG55_RS02640 PF00114 Pilin (bacterial filament) CDG55_RS02640 PF07963 Prokaryotic N-terminal methylation motif CDG55_RS02650 PF15864 Protein glycosylation ligase CDG55_RS02650 PF04932 O-Antigen ligase CDG55_RS02650 PF11846 Virulence factor membrane-bound polymerase, C-terminal CDG55_RS02655 PF00210 Ferritin-like domain CDG55_RS02660 PF04324 BFD-like [2Fe-2S] binding domain CDG55_RS02665 PF01042 Endoribonuclease L-PSP CDG55_RS02670 PF02824 TGS domain CDG55_RS02670 PF04607 Region found in RelA / SpoT proteins CDG55_RS02670 PF13291 ACT domain CDG55_RS02675 PF01192 RNA polymerase Rpb6 CDG55_RS02680 PF00625 Guanylate kinase CDG55_RS02685 PF02401 LytB protein CDG55_RS02710 PF05567 Neisseria PilC beta-propeller domain CDG55_RS02725 PF00886 Ribosomal protein S16 CDG55_RS02730 PF05239 PRC-barrel domain CDG55_RS02730 PF01782 RimM N-terminal domain CDG55_RS02735 PF01746 tRNA (Guanine-1)-methyltransferase CDG55_RS02740 PF01245 Ribosomal protein L19 CDG55_RS02745 PF00561 alpha/beta hydrolase fold CDG55_RS02750 PF03280 Proteobacterial lipase chaperone protein CDG55_RS02755 PF16198 tRNA pseudouridylate synthase B C-terminal domain CDG55_RS02755 PF01509 TruB family pseudouridylate synthase (N terminal domain) CDG55_RS02755 PF09157 Pseudouridine synthase II TruB, C-terminal CDG55_RS02760 PF01925 Sulfite exporter TauE/SafE CDG55_RS02770 PF00892 EamA-like transporter family CDG55_RS02775 PF00892 EamA-like transporter family CDG55_RS02780 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CDG55_RS02780 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CDG55_RS02790 PF02913 FAD linked oxidases, C-terminal domain CDG55_RS02790 PF01565 FAD binding domain CDG55_RS02805 PF03992 Antibiotic biosynthesis monooxygenase CDG55_RS02810 PF02525 Flavodoxin-like fold CDG55_RS02825 PF07690 Major Facilitator Superfamily CDG55_RS02830 PF00080 Copper/zinc superoxide dismutase (SODC) CDG55_RS02835 PF01594 AI-2E family transporter CDG55_RS02845 PF13614 AAA domain CDG55_RS02855 PF01209 ubiE/COQ5 methyltransferase family CDG55_RS02870 PF08241 Methyltransferase domain CDG55_RS02900 PF02092 Glycyl-tRNA synthetase beta subunit CDG55_RS02900 PF05746 DALR anticodon binding domain CDG55_RS02910 PF02091 Glycyl-tRNA synthetase alpha subunit CDG55_RS02930 PF00571 CBS domain CDG55_RS02935 PF04024 PspC domain CDG55_RS02945 PF02770 Acyl-CoA dehydrogenase, middle domain CDG55_RS02945 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CDG55_RS02945 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CDG55_RS02945 PF12806 Acetyl-CoA dehydrogenase C-terminal like CDG55_RS02955 PF08501 Shikimate dehydrogenase substrate binding domain CDG55_RS02955 PF01488 Shikimate / quinate 5-dehydrogenase CDG55_RS02955 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CDG55_RS02960 PF01218 Coproporphyrinogen III oxidase CDG55_RS02965 PF06969 HemN C-terminal domain CDG55_RS02965 PF04055 Radical SAM superfamily CDG55_RS02970 PF00925 GTP cyclohydrolase II CDG55_RS02975 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CDG55_RS02975 PF02779 Transketolase, pyrimidine binding domain CDG55_RS02975 PF02780 Transketolase, C-terminal domain CDG55_RS02980 PF00459 Inositol monophosphatase family CDG55_RS02985 PF00271 Helicase conserved C-terminal domain CDG55_RS02985 PF12343 Cold shock protein DEAD box A CDG55_RS02985 PF00270 DEAD/DEAH box helicase CDG55_RS02985 PF03880 DbpA RNA binding domain CDG55_RS02995 PF00005 ABC transporter CDG55_RS03000 PF02405 Permease MlaE CDG55_RS03005 PF02470 MlaD protein CDG55_RS03010 PF05494 MlaC protein CDG55_RS03020 PF01544 CorA-like Mg2+ transporter protein CDG55_RS03030 PF00156 Phosphoribosyl transferase domain CDG55_RS03035 PF17191 RecG wedge domain CDG55_RS03035 PF00270 DEAD/DEAH box helicase CDG55_RS03035 PF00271 Helicase conserved C-terminal domain CDG55_RS03055 PF01553 Acyltransferase CDG55_RS03065 PF00375 Sodium:dicarboxylate symporter family CDG55_RS03075 PF01926 50S ribosome-binding GTPase CDG55_RS03080 PF02082 Transcriptional regulator CDG55_RS03085 PF00970 Oxidoreductase FAD-binding domain CDG55_RS03085 PF00042 Globin CDG55_RS03085 PF00175 Oxidoreductase NAD-binding domain CDG55_RS03090 PF05872 Bacterial protein of unknown function (DUF853) CDG55_RS03095 PF01053 Cys/Met metabolism PLP-dependent enzyme CDG55_RS03100 PF00117 Glutamine amidotransferase class-I CDG55_RS03105 PF00338 Ribosomal protein S10p/S20e CDG55_RS03110 PF00297 Ribosomal protein L3 CDG55_RS03115 PF00573 Ribosomal protein L4/L1 family CDG55_RS03120 PF00276 Ribosomal protein L23 CDG55_RS03125 PF03947 Ribosomal Proteins L2, C-terminal domain CDG55_RS03125 PF00181 Ribosomal Proteins L2, RNA binding domain CDG55_RS03130 PF00203 Ribosomal protein S19 CDG55_RS03135 PF00237 Ribosomal protein L22p/L17e CDG55_RS03140 PF07650 KH domain CDG55_RS03140 PF00189 Ribosomal protein S3, C-terminal domain CDG55_RS03145 PF00252 Ribosomal protein L16p/L10e CDG55_RS03150 PF00831 Ribosomal L29 protein CDG55_RS03155 PF00366 Ribosomal protein S17 CDG55_RS03160 PF00238 Ribosomal protein L14p/L23e CDG55_RS03165 PF00467 KOW motif CDG55_RS03165 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CDG55_RS03170 PF00281 Ribosomal protein L5 CDG55_RS03170 PF00673 ribosomal L5P family C-terminus CDG55_RS03175 PF00253 Ribosomal protein S14p/S29e CDG55_RS03180 PF00410 Ribosomal protein S8 CDG55_RS03185 PF00347 Ribosomal protein L6 CDG55_RS03190 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CDG55_RS03195 PF03719 Ribosomal protein S5, C-terminal domain CDG55_RS03195 PF00333 Ribosomal protein S5, N-terminal domain CDG55_RS03200 PF00327 Ribosomal protein L30p/L7e CDG55_RS03205 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CDG55_RS03210 PF00344 SecY translocase CDG55_RS03215 PF00444 Ribosomal protein L36 CDG55_RS03220 PF00416 Ribosomal protein S13/S18 CDG55_RS03225 PF00411 Ribosomal protein S11 CDG55_RS03230 PF00163 Ribosomal protein S4/S9 N-terminal domain CDG55_RS03230 PF01479 S4 domain CDG55_RS03235 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CDG55_RS03235 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CDG55_RS03235 PF01000 RNA polymerase Rpb3/RpoA insert domain CDG55_RS03240 PF01196 Ribosomal protein L17 CDG55_RS03250 PF00743 Flavin-binding monooxygenase-like CDG55_RS03260 PF02770 Acyl-CoA dehydrogenase, middle domain CDG55_RS03260 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CDG55_RS03260 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CDG55_RS03265 PF03937 Flavinator of succinate dehydrogenase CDG55_RS03305 PF01432 Peptidase family M3 CDG55_RS03310 PF17876 Cold shock domain CDG55_RS03310 PF08461 Ribonuclease R winged-helix domain CDG55_RS03310 PF00575 S1 RNA binding domain CDG55_RS03310 PF00773 RNB domain CDG55_RS03310 PF08206 Ribonuclease B OB domain CDG55_RS03345 PF01557 Fumarylacetoacetate (FAA) hydrolase family CDG55_RS03350 PF03631 Virulence factor BrkB CDG55_RS03355 PF03358 NADPH-dependent FMN reductase CDG55_RS03360 PF01790 Prolipoprotein diacylglyceryl transferase CDG55_RS03375 PF00902 Sec-independent protein translocase protein (TatC) CDG55_RS03380 PF02416 mttA/Hcf106 family CDG55_RS03385 PF02416 mttA/Hcf106 family CDG55_RS03390 PF01725 Ham1 family CDG55_RS03405 PF00561 alpha/beta hydrolase fold CDG55_RS03405 PF07021 Methionine biosynthesis protein MetW CDG55_RS03410 PF00561 alpha/beta hydrolase fold CDG55_RS03415 PF00682 HMGL-like CDG55_RS03415 PF08502 LeuA allosteric (dimerisation) domain CDG55_RS03420 PF13640 2OG-Fe(II) oxygenase superfamily CDG55_RS03420 PF18331 PKHD-type hydroxylase C-terminal domain CDG55_RS03425 PF07715 TonB-dependent Receptor Plug Domain CDG55_RS03425 PF00593 TonB dependent receptor CDG55_RS03430 PF05698 Bacterial trigger factor protein (TF) C-terminus CDG55_RS03430 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CDG55_RS03430 PF05697 Bacterial trigger factor protein (TF) CDG55_RS03435 PF00574 Clp protease CDG55_RS03440 PF10431 C-terminal, D2-small domain, of ClpB protein CDG55_RS03440 PF07724 AAA domain (Cdc48 subfamily) CDG55_RS03440 PF06689 ClpX C4-type zinc finger CDG55_RS03455 PF05681 Fumarate hydratase (Fumerase) CDG55_RS03455 PF05683 Fumarase C-terminus CDG55_RS03460 PF07085 DRTGG domain CDG55_RS03460 PF01515 Phosphate acetyl/butaryl transferase CDG55_RS03465 PF00871 Acetokinase family CDG55_RS03470 PF00171 Aldehyde dehydrogenase family CDG55_RS03475 PF12697 Alpha/beta hydrolase family CDG55_RS03485 PF00933 Glycosyl hydrolase family 3 N terminal domain CDG55_RS03490 PF11818 C-terminal domain of tail specific protease (DUF3340) CDG55_RS03490 PF17804 Tail specific protease N-terminal domain CDG55_RS03490 PF00595 PDZ domain CDG55_RS03490 PF03572 Peptidase family S41 CDG55_RS03515 PF01926 50S ribosome-binding GTPase CDG55_RS03515 PF16360 GTP-binding GTPase Middle Region CDG55_RS03515 PF13167 GTP-binding GTPase N-terminal CDG55_RS03525 PF13091 PLD-like domain CDG55_RS03530 PF00149 Calcineurin-like phosphoesterase CDG55_RS03530 PF10518 TAT (twin-arginine translocation) pathway signal sequence CDG55_RS03535 PF00691 OmpA family CDG55_RS03535 PF01389 OmpA-like transmembrane domain CDG55_RS03540 PF00990 Diguanylate cyclase, GGDEF domain CDG55_RS03540 PF17152 Periplasmic sensor domain CDG55_RS03580 PF04273 Putative phosphatase (DUF442) CDG55_RS03580 PF00753 Metallo-beta-lactamase superfamily CDG55_RS03585 PF00561 alpha/beta hydrolase fold CDG55_RS03590 PF00085 Thioredoxin CDG55_RS03595 PF03061 Thioesterase superfamily CDG55_RS03605 PF04461 Protein of unknown function (DUF520) CDG55_RS03615 PF01266 FAD dependent oxidoreductase CDG55_RS03615 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CDG55_RS03630 PF04279 Intracellular septation protein A CDG55_RS03640 PF01062 Bestrophin, RFP-TM, chloride channel CDG55_RS03645 PF04002 RadC-like JAB domain CDG55_RS03650 PF02441 Flavoprotein CDG55_RS03650 PF04127 DNA / pantothenate metabolism flavoprotein CDG55_RS03660 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CDG55_RS03660 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CDG55_RS03670 PF02556 Preprotein translocase subunit SecB CDG55_RS03675 PF00462 Glutaredoxin CDG55_RS03685 PF03193 RsgA GTPase CDG55_RS03690 PF00929 Exonuclease CDG55_RS03695 PF07690 Major Facilitator Superfamily CDG55_RS03715 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CDG55_RS03715 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CDG55_RS03720 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CDG55_RS03725 PF02233 NAD(P) transhydrogenase beta subunit CDG55_RS03730 PF00106 short chain dehydrogenase CDG55_RS03735 PF00909 Ammonium Transporter Family CDG55_RS03735 PF00672 HAMP domain CDG55_RS03750 PF01261 Xylose isomerase-like TIM barrel CDG55_RS03755 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CDG55_RS03755 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CDG55_RS03760 PF00378 Enoyl-CoA hydratase/isomerase CDG55_RS03765 PF00512 His Kinase A (phospho-acceptor) domain CDG55_RS03765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDG55_RS03765 PF00672 HAMP domain CDG55_RS03765 PF00072 Response regulator receiver domain CDG55_RS03765 PF01627 Hpt domain CDG55_RS03765 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CDG55_RS03770 PF00291 Pyridoxal-phosphate dependent enzyme CDG55_RS03780 PF05958 tRNA (Uracil-5-)-methyltransferase CDG55_RS03785 PF02824 TGS domain CDG55_RS03785 PF13291 ACT domain CDG55_RS03785 PF04607 Region found in RelA / SpoT proteins CDG55_RS03815 PF03819 MazG nucleotide pyrophosphohydrolase domain CDG55_RS03825 PF01743 Poly A polymerase head domain CDG55_RS03825 PF12626 Polymerase A arginine-rich C-terminus CDG55_RS03825 PF12627 Probable RNA and SrmB- binding site of polymerase A CDG55_RS03830 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CDG55_RS03835 PF02548 Ketopantoate hydroxymethyltransferase CDG55_RS03840 PF02569 Pantoate-beta-alanine ligase CDG55_RS03845 PF03668 P-loop ATPase protein family CDG55_RS03850 PF00381 PTS HPr component phosphorylation site CDG55_RS03855 PF04751 Protein of unknown function (DUF615) CDG55_RS03860 PF13193 AMP-binding enzyme C-terminal domain CDG55_RS03860 PF00501 AMP-binding enzyme CDG55_RS03865 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CDG55_RS03865 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CDG55_RS03865 PF03129 Anticodon binding domain CDG55_RS03865 PF02824 TGS domain CDG55_RS03870 PF05198 Translation initiation factor IF-3, N-terminal domain CDG55_RS03870 PF00707 Translation initiation factor IF-3, C-terminal domain CDG55_RS03875 PF00011 Hsp20/alpha crystallin family CDG55_RS03880 PF00043 Glutathione S-transferase, C-terminal domain CDG55_RS03880 PF02798 Glutathione S-transferase, N-terminal domain CDG55_RS03885 PF09335 SNARE associated Golgi protein CDG55_RS03895 PF01632 Ribosomal protein L35 CDG55_RS03900 PF00453 Ribosomal protein L20 CDG55_RS03915 PF01409 tRNA synthetases class II core domain (F) CDG55_RS03915 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CDG55_RS03920 PF03484 tRNA synthetase B5 domain CDG55_RS03920 PF03147 Ferredoxin-fold anticodon binding domain CDG55_RS03920 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CDG55_RS03920 PF03483 B3/4 domain CDG55_RS03920 PF01588 Putative tRNA binding domain CDG55_RS03925 PF00216 Bacterial DNA-binding protein CDG55_RS03935 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CDG55_RS03935 PF07497 Rho termination factor, RNA-binding domain CDG55_RS03935 PF07498 Rho termination factor, N-terminal domain CDG55_RS03940 PF00085 Thioredoxin CDG55_RS03945 PF02541 Ppx/GppA phosphatase family CDG55_RS03950 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CDG55_RS03955 PF09179 TilS substrate binding domain CDG55_RS03955 PF01171 PP-loop family CDG55_RS03955 PF11734 TilS substrate C-terminal domain CDG55_RS03960 PF14748 Pyrroline-5-carboxylate reductase dimerisation CDG55_RS03960 PF03807 NADP oxidoreductase coenzyme F420-dependent CDG55_RS03965 PF02325 YGGT family CDG55_RS03970 PF00476 DNA polymerase family A CDG55_RS03970 PF01612 3'-5' exonuclease CDG55_RS03970 PF01367 5'-3' exonuclease, C-terminal SAM fold CDG55_RS03970 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CDG55_RS03990 PF00437 Type II/IV secretion system protein CDG55_RS03995 PF02566 OsmC-like protein CDG55_RS04000 PF01047 MarR family CDG55_RS04010 PF00795 Carbon-nitrogen hydrolase CDG55_RS04055 PF04963 Sigma-54 factor, core binding domain CDG55_RS04055 PF00309 Sigma-54 factor, Activator interacting domain (AID) CDG55_RS04055 PF04552 Sigma-54, DNA binding domain CDG55_RS04060 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CDG55_RS04065 PF01722 BolA-like protein CDG55_RS04070 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CDG55_RS04075 PF01634 ATP phosphoribosyltransferase CDG55_RS04085 PF00815 Histidinol dehydrogenase CDG55_RS04090 PF00155 Aminotransferase class I and II CDG55_RS04095 PF00425 chorismate binding enzyme CDG55_RS04095 PF04715 Anthranilate synthase component I, N terminal region CDG55_RS04140 PF00293 NUDIX domain CDG55_RS04145 PF00132 Bacterial transferase hexapeptide (six repeats) CDG55_RS04150 PF00814 Glycoprotease family CDG55_RS04155 PF02673 Bacitracin resistance protein BacA CDG55_RS04160 PF04445 Putative SAM-dependent methyltransferase CDG55_RS04170 PF00756 Putative esterase CDG55_RS04180 PF00834 Ribulose-phosphate 3 epimerase family CDG55_RS04190 PF07731 Multicopper oxidase CDG55_RS04190 PF00394 Multicopper oxidase CDG55_RS04190 PF07732 Multicopper oxidase CDG55_RS04210 PF00893 Small Multidrug Resistance protein CDG55_RS04215 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CDG55_RS04215 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CDG55_RS04220 PF01960 ArgJ family CDG55_RS04225 PF02445 Quinolinate synthetase A protein CDG55_RS04270 PF06039 Malate:quinone oxidoreductase (Mqo) CDG55_RS04275 PF00268 Ribonucleotide reductase, small chain CDG55_RS04290 PF02867 Ribonucleotide reductase, barrel domain CDG55_RS04290 PF03477 ATP cone domain CDG55_RS04290 PF00317 Ribonucleotide reductase, all-alpha domain CDG55_RS04300 PF00072 Response regulator receiver domain CDG55_RS04300 PF00486 Transcriptional regulatory protein, C terminal CDG55_RS04305 PF00512 His Kinase A (phospho-acceptor) domain CDG55_RS04305 PF00672 HAMP domain CDG55_RS04305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDG55_RS04320 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CDG55_RS04325 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CDG55_RS04330 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CDG55_RS04330 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CDG55_RS04340 PF10531 SLBB domain CDG55_RS04340 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CDG55_RS04340 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CDG55_RS04345 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CDG55_RS04345 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CDG55_RS04345 PF00384 Molybdopterin oxidoreductase CDG55_RS04350 PF00146 NADH dehydrogenase CDG55_RS04355 PF12838 4Fe-4S dicluster domain CDG55_RS04360 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CDG55_RS04365 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CDG55_RS04370 PF00361 Proton-conducting membrane transporter CDG55_RS04370 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CDG55_RS04375 PF00361 Proton-conducting membrane transporter CDG55_RS04380 PF00361 Proton-conducting membrane transporter CDG55_RS04395 PF00313 'Cold-shock' DNA-binding domain CDG55_RS04400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDG55_RS04400 PF03466 LysR substrate binding domain CDG55_RS04405 PF00970 Oxidoreductase FAD-binding domain CDG55_RS04405 PF00175 Oxidoreductase NAD-binding domain CDG55_RS04420 PF05552 Conserved TM helix CDG55_RS04440 PF00291 Pyridoxal-phosphate dependent enzyme CDG55_RS04460 PF06100 MCRA family CDG55_RS04470 PF16123 Hydroxyacylglutathione hydrolase C-terminus CDG55_RS04470 PF00753 Metallo-beta-lactamase superfamily CDG55_RS04480 PF09334 tRNA synthetases class I (M) CDG55_RS04480 PF01588 Putative tRNA binding domain CDG55_RS04490 PF13302 Acetyltransferase (GNAT) domain CDG55_RS04500 PF10609 NUBPL iron-transfer P-loop NTPase CDG55_RS04515 PF00692 dUTPase CDG55_RS04545 PF01207 Dihydrouridine synthase (Dus) CDG55_RS04560 PF02978 Signal peptide binding domain CDG55_RS04560 PF02881 SRP54-type protein, helical bundle domain CDG55_RS04560 PF00448 SRP54-type protein, GTPase domain CDG55_RS04565 PF03309 Type III pantothenate kinase CDG55_RS04575 PF01925 Sulfite exporter TauE/SafE CDG55_RS04595 PF02463 RecF/RecN/SMC N terminal domain CDG55_RS04595 PF06470 SMC proteins Flexible Hinge Domain CDG55_RS04605 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CDG55_RS04605 PF12826 Helix-hairpin-helix motif CDG55_RS04605 PF03120 NAD-dependent DNA ligase OB-fold domain CDG55_RS04605 PF00533 BRCA1 C Terminus (BRCT) domain CDG55_RS04605 PF01653 NAD-dependent DNA ligase adenylation domain CDG55_RS04615 PF00210 Ferritin-like domain CDG55_RS04620 PF00578 AhpC/TSA family CDG55_RS04625 PF12697 Alpha/beta hydrolase family CDG55_RS04625 PF08241 Methyltransferase domain CDG55_RS04630 PF00202 Aminotransferase class-III CDG55_RS04630 PF04055 Radical SAM superfamily CDG55_RS04630 PF06968 Biotin and Thiamin Synthesis associated domain CDG55_RS04635 PF00155 Aminotransferase class I and II CDG55_RS04660 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CDG55_RS04665 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CDG55_RS04670 PF01432 Peptidase family M3 CDG55_RS04675 PF00528 Binding-protein-dependent transport system inner membrane component CDG55_RS04680 PF12911 N-terminal TM domain of oligopeptide transport permease C CDG55_RS04680 PF00528 Binding-protein-dependent transport system inner membrane component CDG55_RS04685 PF00005 ABC transporter CDG55_RS04685 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CDG55_RS04690 PF01479 S4 domain CDG55_RS04690 PF00849 RNA pseudouridylate synthase CDG55_RS04695 PF04079 Segregation and condensation complex subunit ScpB CDG55_RS04700 PF02616 Segregation and condensation protein ScpA CDG55_RS04710 PF01300 Telomere recombination CDG55_RS04715 PF04315 Elongation factor P hydroxylase CDG55_RS04720 PF02620 Large ribosomal RNA subunit accumulation protein YceD CDG55_RS04725 PF01783 Ribosomal L32p protein family CDG55_RS04730 PF00698 Acyl transferase domain CDG55_RS04740 PF00550 Phosphopantetheine attachment site CDG55_RS04745 PF00550 Phosphopantetheine attachment site CDG55_RS04750 PF04972 BON domain CDG55_RS04750 PF01476 LysM domain CDG55_RS04755 PF02581 Thiamine monophosphate synthase CDG55_RS04755 PF03070 TENA/THI-4/PQQC family CDG55_RS04755 PF08543 Phosphomethylpyrimidine kinase CDG55_RS04760 PF13419 Haloacid dehalogenase-like hydrolase CDG55_RS04765 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CDG55_RS04770 PF02261 Aspartate decarboxylase CDG55_RS04775 PF01195 Peptidyl-tRNA hydrolase CDG55_RS04780 PF01386 Ribosomal L25p family CDG55_RS04785 PF14572 Phosphoribosyl synthetase-associated domain CDG55_RS04785 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CDG55_RS04810 PF00288 GHMP kinases N terminal domain CDG55_RS04810 PF08544 GHMP kinases C terminal CDG55_RS04815 PF03550 Outer membrane lipoprotein LolB CDG55_RS04825 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CDG55_RS04825 PF01488 Shikimate / quinate 5-dehydrogenase CDG55_RS04825 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CDG55_RS04830 PF10410 DnaB-helicase binding domain of primase CDG55_RS04830 PF08278 DNA primase DnaG DnaB-binding CDG55_RS04830 PF01807 CHC2 zinc finger CDG55_RS04830 PF08275 DNA primase catalytic core, N-terminal domain CDG55_RS04835 PF13525 Outer membrane lipoprotein CDG55_RS04840 PF01479 S4 domain CDG55_RS04840 PF00849 RNA pseudouridylate synthase CDG55_RS04845 PF02578 Multi-copper polyphenol oxidoreductase laccase CDG55_RS04850 PF03358 NADPH-dependent FMN reductase CDG55_RS04855 PF01668 SmpB protein CDG55_RS04955 PF00589 Phage integrase family CDG55_RS04955 PF13356 Arm DNA-binding domain CDG55_RS04960 PF01467 Cytidylyltransferase-like CDG55_RS04965 PF00037 4Fe-4S binding domain CDG55_RS04990 PF00795 Carbon-nitrogen hydrolase CDG55_RS04990 PF02540 NAD synthase CDG55_RS05005 PF03653 Uncharacterised protein family (UPF0093) CDG55_RS05010 PF00109 Beta-ketoacyl synthase, N-terminal domain CDG55_RS05010 PF02801 Beta-ketoacyl synthase, C-terminal domain CDG55_RS05015 PF12787 EcsC protein family CDG55_RS05020 PF00164 Ribosomal protein S12/S23 CDG55_RS05025 PF00177 Ribosomal protein S7p/S5e CDG55_RS05030 PF00009 Elongation factor Tu GTP binding domain CDG55_RS05030 PF03144 Elongation factor Tu domain 2 CDG55_RS05030 PF03764 Elongation factor G, domain IV CDG55_RS05030 PF14492 Elongation Factor G, domain II CDG55_RS05030 PF00679 Elongation factor G C-terminus CDG55_RS05035 PF00009 Elongation factor Tu GTP binding domain CDG55_RS05035 PF03143 Elongation factor Tu C-terminal domain CDG55_RS05035 PF03144 Elongation factor Tu domain 2 CDG55_RS05050 PF00583 Acetyltransferase (GNAT) family CDG55_RS05055 PF04376 Arginine-tRNA-protein transferase, N terminus CDG55_RS05055 PF04377 Arginine-tRNA-protein transferase, C terminus CDG55_RS05060 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CDG55_RS05065 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDG55_RS05070 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CDG55_RS05070 PF17854 FtsK alpha domain CDG55_RS05070 PF09397 Ftsk gamma domain CDG55_RS05070 PF01580 FtsK/SpoIIIE family CDG55_RS05075 PF01810 LysE type translocator CDG55_RS05085 PF03776 Septum formation topological specificity factor MinE CDG55_RS05090 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CDG55_RS05095 PF03775 Septum formation inhibitor MinC, C-terminal domain CDG55_RS05105 PF01553 Acyltransferase CDG55_RS05110 PF00691 OmpA family CDG55_RS05110 PF13488 Glycine zipper CDG55_RS05115 PF13361 UvrD-like helicase C-terminal domain CDG55_RS05115 PF00580 UvrD/REP helicase N-terminal domain CDG55_RS05120 PF00692 dUTPase CDG55_RS05125 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CDG55_RS05125 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CDG55_RS05125 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CDG55_RS05125 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CDG55_RS05130 PF00696 Amino acid kinase family CDG55_RS05140 PF13230 Glutamine amidotransferases class-II CDG55_RS05145 PF01814 Hemerythrin HHE cation binding domain CDG55_RS05155 PF03658 RnfH family Ubiquitin CDG55_RS05160 PF04355 SmpA / OmlA family CDG55_RS05165 PF01475 Ferric uptake regulator family CDG55_RS05170 PF00437 Type II/IV secretion system protein CDG55_RS05175 PF00437 Type II/IV secretion system protein CDG55_RS05180 PF01168 Alanine racemase, N-terminal domain CDG55_RS05190 PF00149 Calcineurin-like phosphoesterase CDG55_RS05190 PF12320 Type 5 capsule protein repressor C-terminal domain CDG55_RS05195 PF00378 Enoyl-CoA hydratase/isomerase CDG55_RS05210 PF01370 NAD dependent epimerase/dehydratase family CDG55_RS05210 PF08338 Domain of unknown function (DUF1731) CDG55_RS05215 PF01266 FAD dependent oxidoreductase CDG55_RS05220 PF00490 Delta-aminolevulinic acid dehydratase CDG55_RS05225 PF03061 Thioesterase superfamily CDG55_RS05230 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CDG55_RS05230 PF00529 HlyD membrane-fusion protein of T1SS CDG55_RS05235 PF07690 Major Facilitator Superfamily CDG55_RS05280 PF13356 Arm DNA-binding domain CDG55_RS05280 PF00589 Phage integrase family CDG55_RS05300 PF03061 Thioesterase superfamily CDG55_RS05310 PF07683 Cobalamin synthesis protein cobW C-terminal domain CDG55_RS05310 PF02492 CobW/HypB/UreG, nucleotide-binding domain CDG55_RS05315 PF07152 YaeQ protein CDG55_RS05320 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CDG55_RS05325 PF13737 Transposase DDE domain CDG55_RS05335 PF14883 Hypothetical glycosyl hydrolase family 13 CDG55_RS05335 PF01522 Polysaccharide deacetylase CDG55_RS05340 PF00535 Glycosyl transferase family 2 CDG55_RS05355 PF09423 PhoD-like phosphatase CDG55_RS05355 PF16655 PhoD-like phosphatase, N-terminal domain CDG55_RS05370 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CDG55_RS05370 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CDG55_RS05385 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CDG55_RS05385 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CDG55_RS05390 PF08220 DeoR-like helix-turn-helix domain CDG55_RS05390 PF00455 DeoR C terminal sensor domain CDG55_RS05395 PF01266 FAD dependent oxidoreductase CDG55_RS05395 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CDG55_RS05410 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain CDG55_RS05410 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain CDG55_RS05415 PF00781 Diacylglycerol kinase catalytic domain CDG55_RS05425 PF00166 Chaperonin 10 Kd subunit CDG55_RS05430 PF00118 TCP-1/cpn60 chaperonin family CDG55_RS05445 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CDG55_RS05445 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CDG55_RS05445 PF11890 Domain of unknown function (DUF3410) CDG55_RS05450 PF00152 tRNA synthetases class II (D, K and N) CDG55_RS05460 PF03781 Sulfatase-modifying factor enzyme 1 CDG55_RS05465 PF00884 Sulfatase CDG55_RS05475 PF01106 NifU-like domain CDG55_RS05475 PF01521 Iron-sulphur cluster biosynthesis CDG55_RS05480 PF07715 TonB-dependent Receptor Plug Domain CDG55_RS05480 PF00593 TonB dependent receptor CDG55_RS05490 PF00561 alpha/beta hydrolase fold CDG55_RS05495 PF00484 Carbonic anhydrase CDG55_RS05500 PF13472 GDSL-like Lipase/Acylhydrolase family CDG55_RS05505 PF00005 ABC transporter CDG55_RS05515 PF01694 Rhomboid family CDG55_RS05520 PF00912 Transglycosylase CDG55_RS05525 PF17941 Polyphosphate kinase C-terminal domain 1 CDG55_RS05525 PF13090 Polyphosphate kinase C-terminal domain 2 CDG55_RS05525 PF02503 Polyphosphate kinase middle domain CDG55_RS05525 PF13089 Polyphosphate kinase N-terminal domain CDG55_RS05530 PF03060 Nitronate monooxygenase CDG55_RS05540 PF03441 FAD binding domain of DNA photolyase CDG55_RS05540 PF00875 DNA photolyase CDG55_RS05545 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CDG55_RS05550 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDG55_RS05555 PF00768 D-alanyl-D-alanine carboxypeptidase CDG55_RS05555 PF07943 Penicillin-binding protein 5, C-terminal domain CDG55_RS05565 PF03971 Monomeric isocitrate dehydrogenase CDG55_RS05575 PF00849 RNA pseudouridylate synthase CDG55_RS05580 PF00180 Isocitrate/isopropylmalate dehydrogenase CDG55_RS05585 PF02567 Phenazine biosynthesis-like protein CDG55_RS05590 PF05193 Peptidase M16 inactive domain CDG55_RS05590 PF00675 Insulinase (Peptidase family M16) CDG55_RS05605 PF01928 CYTH domain CDG55_RS05615 PF13737 Transposase DDE domain CDG55_RS05625 PF00089 Trypsin CDG55_RS05630 PF02581 Thiamine monophosphate synthase CDG55_RS05635 PF00202 Aminotransferase class-III CDG55_RS05645 PF00849 RNA pseudouridylate synthase CDG55_RS05650 PF00271 Helicase conserved C-terminal domain CDG55_RS05650 PF12137 RNA polymerase recycling family C-terminal CDG55_RS05650 PF18337 RapA N-terminal Tudor like domain CDG55_RS05650 PF00176 SNF2 family N-terminal domain CDG55_RS05650 PF18339 RapA N-terminal Tudor like domain 1 CDG55_RS05655 PF00210 Ferritin-like domain CDG55_RS05665 PF00440 Bacterial regulatory proteins, tetR family CDG55_RS05670 PF00175 Oxidoreductase NAD-binding domain CDG55_RS05670 PF00970 Oxidoreductase FAD-binding domain CDG55_RS05670 PF00111 2Fe-2S iron-sulfur cluster binding domain CDG55_RS05675 PF00487 Fatty acid desaturase CDG55_RS05685 PF00202 Aminotransferase class-III CDG55_RS05690 PF00282 Pyridoxal-dependent decarboxylase conserved domain CDG55_RS05700 PF00528 Binding-protein-dependent transport system inner membrane component CDG55_RS05705 PF00528 Binding-protein-dependent transport system inner membrane component CDG55_RS05710 PF00005 ABC transporter CDG55_RS05715 PF08496 Peptidase family S49 N-terminal CDG55_RS05715 PF01343 Peptidase family S49 CDG55_RS05740 PF03717 Penicillin-binding Protein dimerisation domain CDG55_RS05740 PF00905 Penicillin binding protein transpeptidase domain CDG55_RS05755 PF05191 Adenylate kinase, active site lid CDG55_RS05770 PF07728 AAA domain (dynein-related subfamily) CDG55_RS05780 PF05762 VWA domain containing CoxE-like protein CDG55_RS05790 PF00633 Helix-hairpin-helix motif CDG55_RS05790 PF10576 Iron-sulfur binding domain of endonuclease III CDG55_RS05790 PF00730 HhH-GPD superfamily base excision DNA repair protein CDG55_RS05795 PF04060 Putative Fe-S cluster CDG55_RS05800 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CDG55_RS05800 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CDG55_RS05810 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CDG55_RS05815 PF02590 Predicted SPOUT methyltransferase CDG55_RS05820 PF02190 ATP-dependent protease La (LON) substrate-binding domain CDG55_RS05820 PF00004 ATPase family associated with various cellular activities (AAA) CDG55_RS05820 PF05362 Lon protease (S16) C-terminal proteolytic domain CDG55_RS05825 PF01812 5-formyltetrahydrofolate cyclo-ligase family CDG55_RS05835 PF13411 MerR HTH family regulatory protein CDG55_RS05865 PF03695 Uncharacterised protein family (UPF0149) CDG55_RS05870 PF00557 Metallopeptidase family M24 CDG55_RS05870 PF05195 Aminopeptidase P, N-terminal domain CDG55_RS05875 PF01494 FAD binding domain CDG55_RS05880 PF01494 FAD binding domain CDG55_RS05890 PF13411 MerR HTH family regulatory protein CDG55_RS05900 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CDG55_RS05910 PF02021 Uncharacterised protein family UPF0102 CDG55_RS05915 PF04972 BON domain CDG55_RS05925 PF09297 NADH pyrophosphatase zinc ribbon domain CDG55_RS05925 PF00293 NUDIX domain CDG55_RS05935 PF00929 Exonuclease CDG55_RS05940 PF01464 Transglycosylase SLT domain CDG55_RS05940 PF01476 LysM domain CDG55_RS05945 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CDG55_RS05950 PF00528 Binding-protein-dependent transport system inner membrane component CDG55_RS05955 PF12911 N-terminal TM domain of oligopeptide transport permease C CDG55_RS05955 PF00528 Binding-protein-dependent transport system inner membrane component CDG55_RS05960 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CDG55_RS05960 PF00005 ABC transporter CDG55_RS05965 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDG55_RS05965 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CDG55_RS05980 PF00929 Exonuclease CDG55_RS05985 PF01979 Amidohydrolase family CDG55_RS05990 PF00563 EAL domain CDG55_RS05990 PF00360 Phytochrome region CDG55_RS05990 PF00990 Diguanylate cyclase, GGDEF domain CDG55_RS05990 PF01590 GAF domain CDG55_RS06000 PF01208 Uroporphyrinogen decarboxylase (URO-D) CDG55_RS06005 PF05675 Protein of unknown function (DUF817) CDG55_RS06030 PF01227 GTP cyclohydrolase I CDG55_RS06045 PF00218 Indole-3-glycerol phosphate synthase CDG55_RS06050 PF00591 Glycosyl transferase family, a/b domain CDG55_RS06050 PF02885 Glycosyl transferase family, helical bundle domain CDG55_RS06060 PF00117 Glutamine amidotransferase class-I CDG55_RS06065 PF00120 Glutamine synthetase, catalytic domain CDG55_RS06065 PF03951 Glutamine synthetase, beta-Grasp domain CDG55_RS06070 PF04345 Chorismate lyase CDG55_RS06075 PF01040 UbiA prenyltransferase family CDG55_RS06115 PF00155 Aminotransferase class I and II CDG55_RS06125 PF00005 ABC transporter CDG55_RS06140 PF04851 Type III restriction enzyme, res subunit CDG55_RS06140 PF12344 Ultra-violet resistance protein B CDG55_RS06140 PF17757 UvrB interaction domain CDG55_RS06140 PF00271 Helicase conserved C-terminal domain CDG55_RS06140 PF02151 UvrB/uvrC motif CDG55_RS06165 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CDG55_RS06165 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CDG55_RS06170 PF01018 GTP1/OBG CDG55_RS06170 PF01926 50S ribosome-binding GTPase CDG55_RS06175 PF00696 Amino acid kinase family CDG55_RS06175 PF01472 PUA domain CDG55_RS06185 PF07759 Protein of unknown function (DUF1615) CDG55_RS06190 PF01207 Dihydrouridine synthase (Dus) CDG55_RS06195 PF03466 LysR substrate binding domain CDG55_RS06195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDG55_RS06200 PF00561 alpha/beta hydrolase fold CDG55_RS06205 PF18113 Rubredoxin binding C-terminal domain CDG55_RS06205 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDG55_RS06210 PF00301 Rubredoxin CDG55_RS06220 PF01336 OB-fold nucleic acid binding domain CDG55_RS06220 PF00152 tRNA synthetases class II (D, K and N) CDG55_RS06230 PF01507 Phosphoadenosine phosphosulfate reductase family CDG55_RS06235 PF00009 Elongation factor Tu GTP binding domain CDG55_RS06245 PF03471 Transporter associated domain CDG55_RS06245 PF01595 Cyclin M transmembrane N-terminal domain CDG55_RS06245 PF00571 CBS domain CDG55_RS06250 PF03466 LysR substrate binding domain CDG55_RS06250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDG55_RS06255 PF00463 Isocitrate lyase family CDG55_RS06260 PF17185 NlpE C-terminal OB domain CDG55_RS06260 PF04170 NlpE N-terminal domain CDG55_RS06270 PF09190 DALR domain CDG55_RS06270 PF01406 tRNA synthetases class I (C) catalytic domain CDG55_RS06280 PF01380 SIS domain CDG55_RS06280 PF00571 CBS domain CDG55_RS06295 PF03968 OstA-like protein CDG55_RS06300 PF00005 ABC transporter CDG55_RS06300 PF12399 Branched-chain amino acid ATP-binding cassette transporter CDG55_RS06305 PF01205 Uncharacterized protein family UPF0029 CDG55_RS06310 PF00132 Bacterial transferase hexapeptide (six repeats) CDG55_RS06320 PF01596 O-methyltransferase CDG55_RS06330 PF11953 Domain of unknown function (DUF3470) CDG55_RS06330 PF00037 4Fe-4S binding domain CDG55_RS06335 PF05190 MutS family domain IV CDG55_RS06335 PF05188 MutS domain II CDG55_RS06335 PF05192 MutS domain III CDG55_RS06335 PF00488 MutS domain V CDG55_RS06335 PF01624 MutS domain I CDG55_RS06395 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CDG55_RS06395 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CDG55_RS06400 PF01553 Acyltransferase CDG55_RS06405 PF01435 Peptidase family M48 CDG55_RS06420 PF09424 Yqey-like protein CDG55_RS06425 PF01165 Ribosomal protein S21 CDG55_RS06430 PF00814 Glycoprotease family CDG55_RS06455 PF03793 PASTA domain CDG55_RS06455 PF00069 Protein kinase domain CDG55_RS06495 PF00206 Lyase CDG55_RS06495 PF08328 Adenylosuccinate lyase C-terminal CDG55_RS06500 PF04356 Protein of unknown function (DUF489) CDG55_RS06510 PF00293 NUDIX domain CDG55_RS06515 PF10946 Protein of unknown function DUF2625 CDG55_RS06520 PF00132 Bacterial transferase hexapeptide (six repeats) CDG55_RS06525 PF07943 Penicillin-binding protein 5, C-terminal domain CDG55_RS06525 PF00768 D-alanyl-D-alanine carboxypeptidase CDG55_RS06540 PF01975 Survival protein SurE CDG55_RS06545 PF01476 LysM domain CDG55_RS06545 PF01551 Peptidase family M23 CDG55_RS06550 PF03466 LysR substrate binding domain CDG55_RS06550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDG55_RS06555 PF13654 AAA domain CDG55_RS06555 PF05362 Lon protease (S16) C-terminal proteolytic domain CDG55_RS06560 PF07690 Major Facilitator Superfamily CDG55_RS06565 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CDG55_RS06570 PF13593 SBF-like CPA transporter family (DUF4137) CDG55_RS06575 PF01197 Ribosomal protein L31 CDG55_RS06590 PF04055 Radical SAM superfamily CDG55_RS06595 PF01132 Elongation factor P (EF-P) OB domain CDG55_RS06595 PF08207 Elongation factor P (EF-P) KOW-like domain CDG55_RS06595 PF09285 Elongation factor P, C-terminal CDG55_RS06600 PF02554 Carbon starvation protein CstA CDG55_RS06600 PF13722 5TM C-terminal transporter carbon starvation CstA CDG55_RS06605 PF04328 Selenoprotein, putative CDG55_RS06610 PF07726 ATPase family associated with various cellular activities (AAA) CDG55_RS06610 PF17863 AAA lid domain CDG55_RS06620 PF01841 Transglutaminase-like superfamily CDG55_RS06620 PF13559 Domain of unknown function (DUF4129) CDG55_RS06620 PF11992 Domain of unknown function (DUF3488) CDG55_RS06645 PF02678 Pirin CDG55_RS06645 PF17954 Quercetinase C-terminal cupin domain CDG55_RS06650 PF00764 Arginosuccinate synthase CDG55_RS06655 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDG55_RS06655 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CDG55_RS06760 PF13356 Arm DNA-binding domain CDG55_RS06760 PF00589 Phage integrase family CDG55_RS06780 PF09317 Domain of unknown function (DUF1974) CDG55_RS06780 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CDG55_RS06780 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CDG55_RS06785 PF00158 Sigma-54 interaction domain CDG55_RS06785 PF02954 Bacterial regulatory protein, Fis family CDG55_RS06785 PF13185 GAF domain CDG55_RS06790 PF00753 Metallo-beta-lactamase superfamily CDG55_RS06795 PF00753 Metallo-beta-lactamase superfamily CDG55_RS06795 PF04273 Putative phosphatase (DUF442) CDG55_RS06800 PF01925 Sulfite exporter TauE/SafE CDG55_RS06830 PF13649 Methyltransferase domain CDG55_RS06835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDG55_RS06835 PF00512 His Kinase A (phospho-acceptor) domain CDG55_RS06835 PF08521 Two-component sensor kinase N-terminal CDG55_RS06840 PF00072 Response regulator receiver domain CDG55_RS06840 PF00486 Transcriptional regulatory protein, C terminal CDG55_RS06860 PF13936 Helix-turn-helix domain CDG55_RS06860 PF00665 Integrase core domain CDG55_RS06870 PF00958 GMP synthase C terminal domain CDG55_RS06870 PF00117 Glutamine amidotransferase class-I CDG55_RS06870 PF02540 NAD synthase CDG55_RS06880 PF14493 Helix-turn-helix domain CDG55_RS06880 PF05970 PIF1-like helicase CDG55_RS06890 PF02110 Hydroxyethylthiazole kinase family CDG55_RS06925 PF01433 Peptidase family M1 domain CDG55_RS06925 PF17432 Domain of unknown function (DUF3458_C) ARM repeats CDG55_RS06925 PF11940 Domain of unknown function (DUF3458) Ig-like fold CDG55_RS06930 PF13185 GAF domain CDG55_RS06930 PF13492 GAF domain CDG55_RS06930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDG55_RS06930 PF07730 Histidine kinase CDG55_RS06935 PF00072 Response regulator receiver domain CDG55_RS06935 PF00196 Bacterial regulatory proteins, luxR family CDG55_RS06940 PF05685 Putative restriction endonuclease CDG55_RS06955 PF06271 RDD family CDG55_RS06960 PF02254 TrkA-N domain CDG55_RS06960 PF00999 Sodium/hydrogen exchanger family CDG55_RS06965 PF03594 Benzoate membrane transport protein CDG55_RS06970 PF01810 LysE type translocator CDG55_RS06975 PF00923 Transaldolase/Fructose-6-phosphate aldolase CDG55_RS06980 PF03466 LysR substrate binding domain CDG55_RS06980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDG55_RS06990 PF17757 UvrB interaction domain CDG55_RS06990 PF03461 TRCF domain CDG55_RS06990 PF00271 Helicase conserved C-terminal domain CDG55_RS06990 PF00270 DEAD/DEAH box helicase CDG55_RS06990 PF02559 CarD-like/TRCF domain CDG55_RS07000 PF00211 Adenylate and Guanylate cyclase catalytic domain CDG55_RS07010 PF00111 2Fe-2S iron-sulfur cluster binding domain CDG55_RS07015 PF00012 Hsp70 protein CDG55_RS07020 PF00226 DnaJ domain CDG55_RS07020 PF07743 HSCB C-terminal oligomerisation domain CDG55_RS07025 PF01521 Iron-sulphur cluster biosynthesis CDG55_RS07030 PF01592 NifU-like N terminal domain CDG55_RS07035 PF00266 Aminotransferase class-V CDG55_RS07040 PF02082 Transcriptional regulator CDG55_RS07055 PF00216 Bacterial DNA-binding protein CDG55_RS07075 PF02631 RecX family CDG55_RS07080 PF00154 recA bacterial DNA recombination protein CDG55_RS07085 PF01479 S4 domain CDG55_RS07090 PF13419 Haloacid dehalogenase-like hydrolase CDG55_RS07095 PF00459 Inositol monophosphatase family CDG55_RS07105 PF01649 Ribosomal protein S20 CDG55_RS07110 PF13460 NAD(P)H-binding CDG55_RS07115 PF03737 Aldolase/RraA CDG55_RS07130 PF00108 Thiolase, N-terminal domain CDG55_RS07130 PF02803 Thiolase, C-terminal domain CDG55_RS07145 PF00144 Beta-lactamase CDG55_RS07160 PF09397 Ftsk gamma domain CDG55_RS07160 PF01580 FtsK/SpoIIIE family CDG55_RS07160 PF17854 FtsK alpha domain CDG55_RS07170 PF02545 Maf-like protein CDG55_RS07180 PF00162 Phosphoglycerate kinase CDG55_RS07200 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CDG55_RS07200 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CDG55_RS07225 PF01180 Dihydroorotate dehydrogenase CDG55_RS07230 PF02674 Colicin V production protein CDG55_RS07235 PF00156 Phosphoribosyl transferase domain CDG55_RS07245 PF02673 Bacitracin resistance protein BacA CDG55_RS07275 PF05816 Toxic anion resistance protein (TelA) CDG55_RS07290 PF13192 Thioredoxin domain CDG55_RS07290 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDG55_RS07305 PF00132 Bacterial transferase hexapeptide (six repeats) CDG55_RS07310 PF00588 SpoU rRNA Methylase family CDG55_RS07315 PF07733 Bacterial DNA polymerase III alpha NTPase domain CDG55_RS07315 PF14579 Helix-hairpin-helix motif CDG55_RS07315 PF02811 PHP domain CDG55_RS07315 PF01336 OB-fold nucleic acid binding domain CDG55_RS07315 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CDG55_RS07345 PF06968 Biotin and Thiamin Synthesis associated domain CDG55_RS07345 PF04055 Radical SAM superfamily CDG55_RS07350 PF08331 Domain of unknown function (DUF1730) CDG55_RS07355 PF01256 Carbohydrate kinase CDG55_RS07355 PF03853 YjeF-related protein N-terminus CDG55_RS07360 PF02075 Crossover junction endodeoxyribonuclease RuvC CDG55_RS07375 PF00313 'Cold-shock' DNA-binding domain CDG55_RS07380 PF00313 'Cold-shock' DNA-binding domain CDG55_RS07385 PF00313 'Cold-shock' DNA-binding domain CDG55_RS07400 PF05360 yiaA/B two helix domain CDG55_RS07405 PF00472 RF-1 domain CDG55_RS07405 PF03462 PCRF domain CDG55_RS07410 PF13847 Methyltransferase domain CDG55_RS07410 PF17827 PrmC N-terminal domain CDG55_RS07420 PF00106 short chain dehydrogenase CDG55_RS07430 PF03746 LamB/YcsF family CDG55_RS07435 PF02626 Carboxyltransferase domain, subdomain A and B CDG55_RS07440 PF02785 Biotin carboxylase C-terminal domain CDG55_RS07440 PF00364 Biotin-requiring enzyme CDG55_RS07440 PF00289 Biotin carboxylase, N-terminal domain CDG55_RS07440 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CDG55_RS07445 PF01435 Peptidase family M48 CDG55_RS07450 PF13545 Crp-like helix-turn-helix domain CDG55_RS07450 PF00027 Cyclic nucleotide-binding domain CDG55_RS07455 PF02566 OsmC-like protein CDG55_RS07465 PF07724 AAA domain (Cdc48 subfamily) CDG55_RS07465 PF02861 Clp amino terminal domain, pathogenicity island component CDG55_RS07465 PF00004 ATPase family associated with various cellular activities (AAA) CDG55_RS07465 PF10431 C-terminal, D2-small domain, of ClpB protein CDG55_RS07465 PF17871 AAA lid domain CDG55_RS07475 PF01170 Putative RNA methylase family UPF0020 CDG55_RS07475 PF10672 S-adenosylmethionine-dependent methyltransferase CDG55_RS07475 PF02926 THUMP domain CDG55_RS07485 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CDG55_RS07485 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CDG55_RS07490 PF01979 Amidohydrolase family CDG55_RS07505 PF02390 Putative methyltransferase CDG55_RS07515 PF02798 Glutathione S-transferase, N-terminal domain CDG55_RS07515 PF00043 Glutathione S-transferase, C-terminal domain CDG55_RS07525 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDG55_RS07525 PF13192 Thioredoxin domain CDG55_RS07540 PF07883 Cupin domain CDG55_RS07540 PF12833 Helix-turn-helix domain CDG55_RS07545 PF00487 Fatty acid desaturase CDG55_RS07555 PF10417 C-terminal domain of 1-Cys peroxiredoxin CDG55_RS07555 PF00578 AhpC/TSA family CDG55_RS07560 PF04408 Helicase associated domain (HA2) CDG55_RS07560 PF11898 Domain of unknown function (DUF3418) CDG55_RS07560 PF00270 DEAD/DEAH box helicase CDG55_RS07560 PF00271 Helicase conserved C-terminal domain CDG55_RS07560 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CDG55_RS07565 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CDG55_RS07565 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CDG55_RS07575 PF04055 Radical SAM superfamily CDG55_RS07580 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDG55_RS07580 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDG55_RS07595 PF03330 Lytic transglycolase CDG55_RS07595 PF05036 Sporulation related domain CDG55_RS07600 PF13406 Transglycosylase SLT domain CDG55_RS07605 PF01098 Cell cycle protein CDG55_RS07615 PF14489 QueF-like protein CDG55_RS07615 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CDG55_RS07620 PF01061 ABC-2 type transporter CDG55_RS07625 PF00005 ABC transporter CDG55_RS07650 PF00464 Serine hydroxymethyltransferase CDG55_RS07660 PF00037 4Fe-4S binding domain CDG55_RS07665 PF16325 Peptidase family U32 C-terminal domain CDG55_RS07665 PF01136 Peptidase family U32 CDG55_RS07695 PF02772 S-adenosylmethionine synthetase, central domain CDG55_RS07695 PF02773 S-adenosylmethionine synthetase, C-terminal domain CDG55_RS07695 PF00438 S-adenosylmethionine synthetase, N-terminal domain CDG55_RS07700 PF02780 Transketolase, C-terminal domain CDG55_RS07700 PF02779 Transketolase, pyrimidine binding domain CDG55_RS07700 PF00456 Transketolase, thiamine diphosphate binding domain CDG55_RS07725 PF04264 YceI-like domain CDG55_RS07740 PF09992 Phosphodiester glycosidase CDG55_RS07750 PF05958 tRNA (Uracil-5-)-methyltransferase CDG55_RS07755 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CDG55_RS07755 PF01619 Proline dehydrogenase CDG55_RS07755 PF14850 DNA-binding domain of Proline dehydrogenase CDG55_RS07755 PF00171 Aldehyde dehydrogenase family CDG55_RS07760 PF01037 Lrp/AsnC ligand binding domain CDG55_RS07765 PF00474 Sodium:solute symporter family CDG55_RS07770 PF10415 Fumarase C C-terminus CDG55_RS07770 PF00206 Lyase CDG55_RS07775 PF01597 Glycine cleavage H-protein CDG55_RS07780 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CDG55_RS07780 PF12833 Helix-turn-helix domain CDG55_RS07790 PF00005 ABC transporter CDG55_RS07790 PF00664 ABC transporter transmembrane region CDG55_RS07810 PF00970 Oxidoreductase FAD-binding domain CDG55_RS07810 PF00175 Oxidoreductase NAD-binding domain CDG55_RS07815 PF18389 TrmO C-terminal domain CDG55_RS07815 PF01980 tRNA-methyltransferase O CDG55_RS07825 PF00437 Type II/IV secretion system protein CDG55_RS07825 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CDG55_RS07835 PF00293 NUDIX domain CDG55_RS07845 PF14814 Bifunctional transglycosylase second domain CDG55_RS07845 PF00912 Transglycosylase CDG55_RS07845 PF00905 Penicillin binding protein transpeptidase domain CDG55_RS07855 PF01513 ATP-NAD kinase CDG55_RS07860 PF07023 Protein of unknown function (DUF1315) CDG55_RS07865 PF00591 Glycosyl transferase family, a/b domain CDG55_RS07865 PF02885 Glycosyl transferase family, helical bundle domain CDG55_RS07870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CDG55_RS07870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CDG55_RS07870 PF02770 Acyl-CoA dehydrogenase, middle domain CDG55_RS07880 PF01817 Chorismate mutase type II CDG55_RS07880 PF00800 Prephenate dehydratase CDG55_RS07880 PF01842 ACT domain CDG55_RS07885 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CDG55_RS07895 PF01546 Peptidase family M20/M25/M40 CDG55_RS07895 PF07687 Peptidase dimerisation domain CDG55_RS07920 PF03883 Peroxide stress protein YaaA CDG55_RS07950 PF03466 LysR substrate binding domain CDG55_RS07950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDG55_RS07965 PF00924 Mechanosensitive ion channel CDG55_RS07970 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) CDG55_RS07980 PF00375 Sodium:dicarboxylate symporter family CDG55_RS07985 PF05690 Thiazole biosynthesis protein ThiG CDG55_RS07995 PF04241 Protein of unknown function (DUF423) CDG55_RS08000 PF04542 Sigma-70 region 2 CDG55_RS08000 PF00140 Sigma-70 factor, region 1.2 CDG55_RS08000 PF04545 Sigma-70, region 4 CDG55_RS08010 PF00313 'Cold-shock' DNA-binding domain CDG55_RS08015 PF00271 Helicase conserved C-terminal domain CDG55_RS08015 PF00270 DEAD/DEAH box helicase CDG55_RS08020 PF01116 Fructose-bisphosphate aldolase class-II CDG55_RS08025 PF00639 PPIC-type PPIASE domain CDG55_RS08025 PF09312 SurA N-terminal domain CDG55_RS08030 PF04453 LPS transport system D CDG55_RS08030 PF03968 OstA-like protein CDG55_RS08035 PF01636 Phosphotransferase enzyme family CDG55_RS08040 PF00483 Nucleotidyl transferase CDG55_RS08045 PF02527 rRNA small subunit methyltransferase G CDG55_RS08050 PF13614 AAA domain CDG55_RS08055 PF02195 ParB-like nuclease domain CDG55_RS08055 PF17762 HTH domain found in ParB protein CDG55_RS08060 PF01618 MotA/TolQ/ExbB proton channel family CDG55_RS08070 PF00664 ABC transporter transmembrane region CDG55_RS08070 PF00005 ABC transporter CDG55_RS08075 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CDG55_RS08080 PF02348 Cytidylyltransferase CDG55_RS08085 PF09115 DNA polymerase III, delta subunit, C terminal CDG55_RS08095 PF01026 TatD related DNase CDG55_RS08110 PF02501 Type II secretion system (T2SS), protein I CDG55_RS08110 PF07963 Prokaryotic N-terminal methylation motif CDG55_RS08115 PF11612 Type II secretion system (T2SS), protein J CDG55_RS08115 PF07963 Prokaryotic N-terminal methylation motif CDG55_RS08120 PF03934 Type II secretion system (T2SS), protein K CDG55_RS08130 PF03167 Uracil DNA glycosylase superfamily CDG55_RS08140 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CDG55_RS08150 PF02224 Cytidylate kinase CDG55_RS08155 PF00575 S1 RNA binding domain CDG55_RS08160 PF00216 Bacterial DNA-binding protein CDG55_RS08175 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CDG55_RS08180 PF03956 Lysine exporter LysO CDG55_RS08185 PF00743 Flavin-binding monooxygenase-like CDG55_RS08195 PF03969 AFG1-like ATPase CDG55_RS08200 PF01274 Malate synthase CDG55_RS08230 PF05525 Branched-chain amino acid transport protein CDG55_RS08235 PF00557 Metallopeptidase family M24 CDG55_RS08240 PF03466 LysR substrate binding domain CDG55_RS08240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDG55_RS08245 PF02824 TGS domain CDG55_RS08245 PF13291 ACT domain CDG55_RS08245 PF04607 Region found in RelA / SpoT proteins CDG55_RS08255 PF00462 Glutaredoxin CDG55_RS08260 PF00202 Aminotransferase class-III CDG55_RS08265 PF01380 SIS domain CDG55_RS08265 PF00571 CBS domain CDG55_RS08290 PF02881 SRP54-type protein, helical bundle domain CDG55_RS08290 PF00448 SRP54-type protein, GTPase domain CDG55_RS08315 PF08173 Membrane bound YbgT-like protein CDG55_RS08320 PF02322 Cytochrome bd terminal oxidase subunit II CDG55_RS08325 PF01654 Cytochrome bd terminal oxidase subunit I CDG55_RS08345 PF00294 pfkB family carbohydrate kinase CDG55_RS08350 PF08367 Peptidase M16C associated CDG55_RS08350 PF00675 Insulinase (Peptidase family M16) CDG55_RS08350 PF05193 Peptidase M16 inactive domain CDG55_RS08355 PF02253 Phospholipase A1 CDG55_RS08390 PF02386 Cation transport protein CDG55_RS08395 PF02080 TrkA-C domain CDG55_RS08395 PF02254 TrkA-N domain CDG55_RS08400 PF00291 Pyridoxal-phosphate dependent enzyme CDG55_RS08400 PF00585 C-terminal regulatory domain of Threonine dehydratase CDG55_RS08405 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CDG55_RS08420 PF01118 Semialdehyde dehydrogenase, NAD binding domain CDG55_RS08420 PF02774 Semialdehyde dehydrogenase, dimerisation domain CDG55_RS08430 PF02617 ATP-dependent Clp protease adaptor protein ClpS CDG55_RS08440 PF07724 AAA domain (Cdc48 subfamily) CDG55_RS08440 PF17871 AAA lid domain CDG55_RS08440 PF00004 ATPase family associated with various cellular activities (AAA) CDG55_RS08440 PF02861 Clp amino terminal domain, pathogenicity island component CDG55_RS08440 PF10431 C-terminal, D2-small domain, of ClpB protein CDG55_RS08445 PF02694 Uncharacterised BCR, YnfA/UPF0060 family CDG55_RS08450 PF00793 DAHP synthetase I family CDG55_RS08455 PF12697 Alpha/beta hydrolase family CDG55_RS08465 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDG55_RS08465 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CDG55_RS08490 PF06418 CTP synthase N-terminus CDG55_RS08490 PF00117 Glutamine amidotransferase class-I CDG55_RS08495 PF00793 DAHP synthetase I family CDG55_RS08500 PF03952 Enolase, N-terminal domain CDG55_RS08500 PF00113 Enolase, C-terminal TIM barrel domain CDG55_RS08505 PF04977 Septum formation initiator CDG55_RS08510 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CDG55_RS08520 PF04143 Sulphur transport CDG55_RS08530 PF00753 Metallo-beta-lactamase superfamily CDG55_RS08550 PF01425 Amidase CDG55_RS08555 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CDG55_RS08555 PF00364 Biotin-requiring enzyme CDG55_RS08555 PF00289 Biotin carboxylase, N-terminal domain CDG55_RS08555 PF02785 Biotin carboxylase C-terminal domain CDG55_RS08560 PF00392 Bacterial regulatory proteins, gntR family CDG55_RS08560 PF07729 FCD domain CDG55_RS08565 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding CDG55_RS08565 PF18381 YcaO cyclodehydratase C-terminal domain CDG55_RS08585 PF08267 Cobalamin-independent synthase, N-terminal domain CDG55_RS08585 PF01717 Cobalamin-independent synthase, Catalytic domain CDG55_RS08590 PF01613 Flavin reductase like domain CDG55_RS08595 PF01925 Sulfite exporter TauE/SafE CDG55_RS08630 PF00990 Diguanylate cyclase, GGDEF domain CDG55_RS08635 PF01264 Chorismate synthase CDG55_RS08640 PF05175 Methyltransferase small domain CDG55_RS08650 PF01434 Peptidase family M41 CDG55_RS08650 PF00004 ATPase family associated with various cellular activities (AAA) CDG55_RS08650 PF17862 AAA+ lid domain CDG55_RS08660 PF05166 YcgL domain CDG55_RS08665 PF00570 HRDC domain CDG55_RS08665 PF01612 3'-5' exonuclease CDG55_RS08670 PF13662 Toprim domain CDG55_RS08670 PF02132 RecR protein CDG55_RS08675 PF02575 YbaB/EbfC DNA-binding family CDG55_RS08680 PF01053 Cys/Met metabolism PLP-dependent enzyme CDG55_RS08690 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CDG55_RS08690 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CDG55_RS08700 PF01230 HIT domain CDG55_RS08725 PF02684 Lipid-A-disaccharide synthetase CDG55_RS08755 PF01925 Sulfite exporter TauE/SafE CDG55_RS08760 PF00793 DAHP synthetase I family CDG55_RS08770 PF00593 TonB dependent receptor CDG55_RS08770 PF07715 TonB-dependent Receptor Plug Domain CDG55_RS08780 PF02654 Cobalamin-5-phosphate synthase CDG55_RS08790 PF00300 Histidine phosphatase superfamily (branch 1) CDG55_RS08795 PF02277 Phosphoribosyltransferase CDG55_RS08800 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CDG55_RS08810 PF13419 Haloacid dehalogenase-like hydrolase CDG55_RS08820 PF07715 TonB-dependent Receptor Plug Domain CDG55_RS08820 PF00593 TonB dependent receptor CDG55_RS08825 PF07690 Major Facilitator Superfamily CDG55_RS08840 PF06276 Ferric iron reductase FhuF-like transporter CDG55_RS08840 PF04183 IucA / IucC family CDG55_RS08845 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) CDG55_RS08850 PF04183 IucA / IucC family CDG55_RS08850 PF06276 Ferric iron reductase FhuF-like transporter CDG55_RS08855 PF04073 Aminoacyl-tRNA editing domain CDG55_RS08865 PF03109 ABC1 family CDG55_RS08870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CDG55_RS08870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CDG55_RS08870 PF02770 Acyl-CoA dehydrogenase, middle domain CDG55_RS08875 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CDG55_RS08875 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CDG55_RS08875 PF02770 Acyl-CoA dehydrogenase, middle domain CDG55_RS08880 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDG55_RS08880 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDG55_RS08885 PF00487 Fatty acid desaturase CDG55_RS08890 PF12833 Helix-turn-helix domain CDG55_RS08890 PF12852 Cupin CDG55_RS08895 PF00132 Bacterial transferase hexapeptide (six repeats) CDG55_RS08895 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CDG55_RS08900 PF07977 FabA-like domain CDG55_RS08905 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CDG55_RS08905 PF00132 Bacterial transferase hexapeptide (six repeats) CDG55_RS08915 PF01103 Surface antigen CDG55_RS08915 PF07244 Surface antigen variable number repeat CDG55_RS08935 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CDG55_RS08935 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CDG55_RS08935 PF13288 DXP reductoisomerase C-terminal domain CDG55_RS08945 PF01255 Putative undecaprenyl diphosphate synthase CDG55_RS08950 PF01765 Ribosome recycling factor CDG55_RS08955 PF00696 Amino acid kinase family CDG55_RS08960 PF00919 Uncharacterized protein family UPF0004 CDG55_RS08960 PF18693 TRAM domain CDG55_RS08960 PF04055 Radical SAM superfamily CDG55_RS08965 PF00512 His Kinase A (phospho-acceptor) domain CDG55_RS08965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDG55_RS08965 PF00989 PAS fold CDG55_RS08970 PF00158 Sigma-54 interaction domain CDG55_RS08970 PF02954 Bacterial regulatory protein, Fis family CDG55_RS08970 PF00072 Response regulator receiver domain CDG55_RS08975 PF00440 Bacterial regulatory proteins, tetR family CDG55_RS08980 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CDG55_RS08980 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CDG55_RS08990 PF02542 YgbB family CDG55_RS09000 PF01266 FAD dependent oxidoreductase CDG55_RS09010 PF00206 Lyase CDG55_RS09010 PF10415 Fumarase C C-terminus CDG55_RS09015 PF16363 GDP-mannose 4,6 dehydratase CDG55_RS09020 PF02635 DsrE/DsrF-like family CDG55_RS09040 PF01638 HxlR-like helix-turn-helix CDG55_RS09045 PF00994 Probable molybdopterin binding domain CDG55_RS09045 PF03454 MoeA C-terminal region (domain IV) CDG55_RS09045 PF03453 MoeA N-terminal region (domain I and II) CDG55_RS09050 PF00994 Probable molybdopterin binding domain CDG55_RS09050 PF01967 MoaC family CDG55_RS09055 PF02391 MoaE protein CDG55_RS09065 PF06463 Molybdenum Cofactor Synthesis C CDG55_RS09065 PF04055 Radical SAM superfamily CDG55_RS09070 PF12804 MobA-like NTP transferase domain CDG55_RS09075 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CDG55_RS09075 PF00384 Molybdopterin oxidoreductase CDG55_RS09075 PF01568 Molydopterin dinucleotide binding domain CDG55_RS09075 PF04324 BFD-like [2Fe-2S] binding domain CDG55_RS09080 PF04324 BFD-like [2Fe-2S] binding domain CDG55_RS09080 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CDG55_RS09080 PF18267 Rubredoxin NAD+ reductase C-terminal domain CDG55_RS09080 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDG55_RS09080 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CDG55_RS09085 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CDG55_RS09085 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CDG55_RS09085 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDG55_RS09085 PF13806 Rieske-like [2Fe-2S] domain CDG55_RS09085 PF18267 Rubredoxin NAD+ reductase C-terminal domain CDG55_RS09085 PF04324 BFD-like [2Fe-2S] binding domain CDG55_RS09090 PF07690 Major Facilitator Superfamily CDG55_RS09100 PF00005 ABC transporter CDG55_RS09105 PF01220 Dehydroquinase class II CDG55_RS09110 PF00364 Biotin-requiring enzyme CDG55_RS09115 PF02785 Biotin carboxylase C-terminal domain CDG55_RS09115 PF00289 Biotin carboxylase, N-terminal domain CDG55_RS09115 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CDG55_RS09125 PF01425 Amidase CDG55_RS09130 PF12832 MFS_1 like family CDG55_RS09145 PF01565 FAD binding domain CDG55_RS09145 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CDG55_RS09150 PF01451 Low molecular weight phosphotyrosine protein phosphatase CDG55_RS09155 PF00465 Iron-containing alcohol dehydrogenase CDG55_RS09160 PF03061 Thioesterase superfamily CDG55_RS09165 PF12169 DNA polymerase III subunits gamma and tau domain III CDG55_RS09165 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CDG55_RS09165 PF12170 DNA polymerase III tau subunit V interacting with alpha CDG55_RS09170 PF08007 Cupin superfamily protein CDG55_RS09185 PF07690 Major Facilitator Superfamily CDG55_RS09190 PF09997 Predicted membrane protein (DUF2238) CDG55_RS09195 PF00520 Ion transport protein CDG55_RS09195 PF00027 Cyclic nucleotide-binding domain CDG55_RS09215 PF00330 Aconitase family (aconitate hydratase) CDG55_RS09215 PF11791 Aconitate B N-terminal domain CDG55_RS09215 PF06434 Aconitate hydratase 2 N-terminus CDG55_RS09235 PF07244 Surface antigen variable number repeat CDG55_RS09235 PF01103 Surface antigen CDG55_RS09235 PF17243 POTRA domain TamA domain 1 CDG55_RS09240 PF07690 Major Facilitator Superfamily CDG55_RS09245 PF03232 Ubiquinone biosynthesis protein COQ7 CDG55_RS09260 PF02152 Dihydroneopterin aldolase CDG55_RS09265 PF03109 ABC1 family CDG55_RS09270 PF00899 ThiF family CDG55_RS09280 PF04151 Bacterial pre-peptidase C-terminal domain CDG55_RS09290 PF00107 Zinc-binding dehydrogenase CDG55_RS09290 PF16884 N-terminal domain of oxidoreductase CDG55_RS09295 PF16925 Tetracyclin repressor-like, C-terminal domain CDG55_RS09295 PF00440 Bacterial regulatory proteins, tetR family CDG55_RS09305 PF00465 Iron-containing alcohol dehydrogenase CDG55_RS09320 PF00756 Putative esterase CDG55_RS09325 PF00107 Zinc-binding dehydrogenase CDG55_RS09325 PF08240 Alcohol dehydrogenase GroES-like domain CDG55_RS09330 PF02583 Metal-sensitive transcriptional repressor CDG55_RS09335 PF14765 Polyketide synthase dehydratase CDG55_RS09335 PF00550 Phosphopantetheine attachment site CDG55_RS09335 PF08659 KR domain CDG55_RS09335 PF02801 Beta-ketoacyl synthase, C-terminal domain CDG55_RS09335 PF00109 Beta-ketoacyl synthase, N-terminal domain CDG55_RS09335 PF00698 Acyl transferase domain CDG55_RS09335 PF08240 Alcohol dehydrogenase GroES-like domain CDG55_RS09335 PF16197 Ketoacyl-synthetase C-terminal extension CDG55_RS09340 PF08240 Alcohol dehydrogenase GroES-like domain CDG55_RS09340 PF00107 Zinc-binding dehydrogenase CDG55_RS09345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDG55_RS09345 PF03466 LysR substrate binding domain CDG55_RS09350 PF00106 short chain dehydrogenase CDG55_RS09355 PF08240 Alcohol dehydrogenase GroES-like domain CDG55_RS09355 PF00107 Zinc-binding dehydrogenase CDG55_RS09380 PF01709 Transcriptional regulator CDG55_RS09395 PF06071 Protein of unknown function (DUF933) CDG55_RS09395 PF01926 50S ribosome-binding GTPase CDG55_RS09400 PF17158 Membrane-associated sensor, integral membrane domain CDG55_RS09400 PF00990 Diguanylate cyclase, GGDEF domain CDG55_RS09415 PF13545 Crp-like helix-turn-helix domain CDG55_RS09415 PF00027 Cyclic nucleotide-binding domain CDG55_RS09435 PF02222 ATP-grasp domain CDG55_RS09440 PF01966 HD domain CDG55_RS09440 PF08335 GlnD PII-uridylyltransferase CDG55_RS09440 PF01909 Nucleotidyltransferase domain CDG55_RS09445 PF00155 Aminotransferase class I and II CDG55_RS09455 PF01037 Lrp/AsnC ligand binding domain CDG55_RS09460 PF13533 Biotin-lipoyl like CDG55_RS09465 PF00873 AcrB/AcrD/AcrF family CDG55_RS09470 PF00255 Glutathione peroxidase CDG55_RS09475 PF01641 SelR domain CDG55_RS09480 PF00155 Aminotransferase class I and II CDG55_RS09490 PF00665 Integrase core domain CDG55_RS09490 PF13936 Helix-turn-helix domain CDG55_RS09495 PF01389 OmpA-like transmembrane domain CDG55_RS09495 PF00691 OmpA family CDG55_RS09560 PF00155 Aminotransferase class I and II CDG55_RS09560 PF00392 Bacterial regulatory proteins, gntR family CDG55_RS09565 PF12833 Helix-turn-helix domain CDG55_RS09565 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CDG55_RS09575 PF00106 short chain dehydrogenase CDG55_RS09590 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CDG55_RS09590 PF00749 tRNA synthetases class I (E and Q), catalytic domain CDG55_RS09595 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CDG55_RS09600 PF00149 Calcineurin-like phosphoesterase CDG55_RS09615 PF17209 Hfq protein CDG55_RS09625 PF08676 MutL C terminal dimerisation domain CDG55_RS09625 PF01119 DNA mismatch repair protein, C-terminal domain CDG55_RS09630 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CDG55_RS09640 PF00849 RNA pseudouridylate synthase CDG55_RS09640 PF01479 S4 domain CDG55_RS09650 PF00583 Acetyltransferase (GNAT) family CDG55_RS09655 PF00849 RNA pseudouridylate synthase CDG55_RS09655 PF01479 S4 domain CDG55_RS09665 PF00296 Luciferase-like monooxygenase CDG55_RS09670 PF03618 Kinase/pyrophosphorylase CDG55_RS09675 PF00391 PEP-utilising enzyme, mobile domain CDG55_RS09675 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CDG55_RS09675 PF02896 PEP-utilising enzyme, TIM barrel domain CDG55_RS09685 PF06481 COX Aromatic Rich Motif CDG55_RS09685 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CDG55_RS09690 PF00115 Cytochrome C and Quinol oxidase polypeptide I CDG55_RS09695 PF00510 Cytochrome c oxidase subunit III CDG55_RS09700 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CDG55_RS09705 PF01040 UbiA prenyltransferase family CDG55_RS09720 PF01250 Ribosomal protein S6 CDG55_RS09725 PF01084 Ribosomal protein S18 CDG55_RS09730 PF03948 Ribosomal protein L9, C-terminal domain CDG55_RS09730 PF01281 Ribosomal protein L9, N-terminal domain CDG55_RS09735 PF00772 DnaB-like helicase N terminal domain CDG55_RS09735 PF03796 DnaB-like helicase C terminal domain CDG55_RS09740 PF00842 Alanine racemase, C-terminal domain CDG55_RS09740 PF01168 Alanine racemase, N-terminal domain CDG55_RS09750 PF08379 Bacterial transglutaminase-like N-terminal region CDG55_RS09750 PF01841 Transglutaminase-like superfamily CDG55_RS09760 PF14403 Circularly permuted ATP-grasp type 2 CDG55_RS09770 PF01258 Prokaryotic dksA/traR C4-type zinc finger CDG55_RS09775 PF00709 Adenylosuccinate synthetase CDG55_RS09780 PF13393 Histidyl-tRNA synthetase CDG55_RS09795 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CDG55_RS09795 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CDG55_RS09800 PF01411 tRNA synthetases class II (A) CDG55_RS09800 PF02272 DHHA1 domain CDG55_RS09800 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CDG55_RS09805 PF00696 Amino acid kinase family CDG55_RS09805 PF01842 ACT domain CDG55_RS09805 PF13840 ACT domain CDG55_RS09810 PF02599 Global regulator protein family CDG55_RS09815 PF01351 Ribonuclease HII CDG55_RS09830 PF01292 Prokaryotic cytochrome b561 CDG55_RS09835 PF00962 Adenosine/AMP deaminase CDG55_RS09840 PF00860 Permease family CDG55_RS09865 PF00175 Oxidoreductase NAD-binding domain CDG55_RS09865 PF00667 FAD binding domain CDG55_RS09865 PF00258 Flavodoxin CDG55_RS09885 PF00893 Small Multidrug Resistance protein CDG55_RS09890 PF01134 Glucose inhibited division protein A CDG55_RS09890 PF13932 GidA associated domain CDG55_RS09910 PF02954 Bacterial regulatory protein, Fis family CDG55_RS09915 PF01808 AICARFT/IMPCHase bienzyme CDG55_RS09915 PF02142 MGS-like domain CDG55_RS09920 PF02844 Phosphoribosylglycinamide synthetase, N domain CDG55_RS09920 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CDG55_RS09920 PF02843 Phosphoribosylglycinamide synthetase, C domain CDG55_RS09925 PF03180 NLPA lipoprotein CDG55_RS09930 PF09383 NIL domain CDG55_RS09930 PF00005 ABC transporter CDG55_RS09935 PF00528 Binding-protein-dependent transport system inner membrane component CDG55_RS09950 PF16123 Hydroxyacylglutathione hydrolase C-terminus CDG55_RS09950 PF00753 Metallo-beta-lactamase superfamily CDG55_RS09960 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CDG55_RS09960 PF05221 S-adenosyl-L-homocysteine hydrolase CDG55_RS09965 PF02219 Methylenetetrahydrofolate reductase CDG55_RS09970 PF04452 RNA methyltransferase CDG55_RS09975 PF00563 EAL domain CDG55_RS09975 PF00990 Diguanylate cyclase, GGDEF domain CDG55_RS09975 PF03707 Bacterial signalling protein N terminal repeat CDG55_RS09980 PF01515 Phosphate acetyl/butaryl transferase CDG55_RS09980 PF03949 Malic enzyme, NAD binding domain CDG55_RS09980 PF00390 Malic enzyme, N-terminal domain CDG55_RS09985 PF01743 Poly A polymerase head domain CDG55_RS09985 PF12627 Probable RNA and SrmB- binding site of polymerase A CDG55_RS09990 PF00889 Elongation factor TS CDG55_RS09995 PF00318 Ribosomal protein S2 CDG55_RS10000 PF00557 Metallopeptidase family M24 CDG55_RS10015 PF13737 Transposase DDE domain CDG55_RS10025 PF07690 Major Facilitator Superfamily CDG55_RS10035 PF13180 PDZ domain CDG55_RS10040 PF01784 NIF3 (NGG1p interacting factor 3) CDG55_RS10045 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CDG55_RS10045 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CDG55_RS10060 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) CDG55_RS10065 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CDG55_RS10070 PF02565 Recombination protein O C terminal CDG55_RS10070 PF11967 Recombination protein O N terminal CDG55_RS10080 PF01926 50S ribosome-binding GTPase CDG55_RS10080 PF07650 KH domain CDG55_RS10085 PF00035 Double-stranded RNA binding motif CDG55_RS10085 PF14622 Ribonuclease-III-like CDG55_RS10095 PF10502 Signal peptidase, peptidase S26 CDG55_RS10100 PF03144 Elongation factor Tu domain 2 CDG55_RS10100 PF00679 Elongation factor G C-terminus CDG55_RS10100 PF06421 GTP-binding protein LepA C-terminus CDG55_RS10100 PF00009 Elongation factor Tu GTP binding domain CDG55_RS10110 PF13180 PDZ domain CDG55_RS10115 PF02910 Fumarate reductase flavoprotein C-term CDG55_RS10115 PF00890 FAD binding domain CDG55_RS10120 PF02223 Thymidylate kinase CDG55_RS10125 PF02618 YceG-like family CDG55_RS10130 PF01063 Amino-transferase class IV CDG55_RS10145 PF00528 Binding-protein-dependent transport system inner membrane component CDG55_RS10150 PF00528 Binding-protein-dependent transport system inner membrane component CDG55_RS10155 PF12857 TOBE-like domain CDG55_RS10155 PF00005 ABC transporter CDG55_RS10160 PF03466 LysR substrate binding domain CDG55_RS10160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDG55_RS10170 PF00132 Bacterial transferase hexapeptide (six repeats) CDG55_RS10170 PF14602 Hexapeptide repeat of succinyl-transferase CDG55_RS10170 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CDG55_RS10175 PF04055 Radical SAM superfamily CDG55_RS10180 PF06508 Queuosine biosynthesis protein QueC CDG55_RS10195 PF00578 AhpC/TSA family CDG55_RS10205 PF00293 NUDIX domain CDG55_RS10205 PF01467 Cytidylyltransferase-like CDG55_RS10210 PF00378 Enoyl-CoA hydratase/isomerase CDG55_RS10215 PF00881 Nitroreductase family CDG55_RS10220 PF01784 NIF3 (NGG1p interacting factor 3) CDG55_RS10225 PF02769 AIR synthase related protein, C-terminal domain CDG55_RS10225 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CDG55_RS10225 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal CDG55_RS10235 PF01966 HD domain CDG55_RS10240 PF01330 RuvA N terminal domain CDG55_RS10240 PF07499 RuvA, C-terminal domain CDG55_RS10245 PF05496 Holliday junction DNA helicase RuvB P-loop domain CDG55_RS10245 PF17864 RuvB AAA lid domain CDG55_RS10245 PF05491 RuvB C-terminal winged helix domain CDG55_RS10255 PF03061 Thioesterase superfamily CDG55_RS10260 PF01618 MotA/TolQ/ExbB proton channel family CDG55_RS10265 PF02472 Biopolymer transport protein ExbD/TolR CDG55_RS10275 PF04052 TolB amino-terminal domain CDG55_RS10275 PF07676 WD40-like Beta Propeller Repeat CDG55_RS10280 PF00691 OmpA family CDG55_RS10290 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CDG55_RS10295 PF08032 RNA 2'-O ribose methyltransferase substrate binding CDG55_RS10295 PF00588 SpoU rRNA Methylase family CDG55_RS10330 PF08299 Bacterial dnaA protein helix-turn-helix CDG55_RS10330 PF00308 Bacterial dnaA protein CDG55_RS10330 PF11638 DnaA N-terminal domain CDG55_RS10335 PF01594 AI-2E family transporter CDG55_RS10340 PF02769 AIR synthase related protein, C-terminal domain CDG55_RS10340 PF00586 AIR synthase related protein, N-terminal domain CDG55_RS10345 PF00551 Formyl transferase CDG55_RS10355 PF12697 Alpha/beta hydrolase family CDG55_RS10360 PF06965 Na+/H+ antiporter 1 CDG55_RS10360 PF01343 Peptidase family S49 CDG55_RS10365 PF03279 Bacterial lipid A biosynthesis acyltransferase CDG55_RS10370 PF03772 Competence protein CDG55_RS10370 PF13567 Domain of unknown function (DUF4131) CDG55_RS10370 PF00753 Metallo-beta-lactamase superfamily CDG55_RS10375 PF00005 ABC transporter CDG55_RS10380 PF12704 MacB-like periplasmic core domain CDG55_RS10380 PF02687 FtsX-like permease family CDG55_RS10395 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CDG55_RS10405 PF00266 Aminotransferase class-V CDG55_RS10415 PF13533 Biotin-lipoyl like CDG55_RS10430 PF03989 DNA gyrase C-terminal domain, beta-propeller CDG55_RS10430 PF00521 DNA gyrase/topoisomerase IV, subunit A CDG55_RS10440 PF00766 Electron transfer flavoprotein FAD-binding domain CDG55_RS10440 PF01012 Electron transfer flavoprotein domain CDG55_RS10445 PF01012 Electron transfer flavoprotein domain CDG55_RS10455 PF02899 Phage integrase, N-terminal SAM-like domain CDG55_RS10455 PF00589 Phage integrase family CDG55_RS10460 PF01810 LysE type translocator CDG55_RS10470 PF01678 Diaminopimelate epimerase CDG55_RS10475 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CDG55_RS10475 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CDG55_RS10485 PF00324 Amino acid permease CDG55_RS10490 PF01235 Sodium:alanine symporter family CDG55_RS10495 PF18073 Rubredoxin metal binding domain CDG55_RS10505 PF01384 Phosphate transporter family CDG55_RS10510 PF02310 B12 binding domain CDG55_RS10510 PF02607 B12 binding domain CDG55_RS10510 PF02965 Vitamin B12 dependent methionine synthase, activation domain CDG55_RS10510 PF00809 Pterin binding enzyme CDG55_RS10510 PF02574 Homocysteine S-methyltransferase CDG55_RS10515 PF13737 Transposase DDE domain CDG55_RS10535 PF00582 Universal stress protein family CDG55_RS10550 PF04734 Neutral/alkaline non-lysosomal ceramidase, N-terminal CDG55_RS10550 PF17048 Neutral/alkaline non-lysosomal ceramidase, C-terminal CDG55_RS10555 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CDG55_RS10555 PF12833 Helix-turn-helix domain CDG55_RS10570 PF03459 TOBE domain CDG55_RS10570 PF00005 ABC transporter CDG55_RS10575 PF00528 Binding-protein-dependent transport system inner membrane component CDG55_RS10595 PF04244 Deoxyribodipyrimidine photo-lyase-related protein CDG55_RS10605 PF08212 Lipocalin-like domain CDG55_RS10610 PF00465 Iron-containing alcohol dehydrogenase CDG55_RS10620 PF00171 Aldehyde dehydrogenase family CDG55_RS10625 PF00324 Amino acid permease CDG55_RS10630 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CDG55_RS10635 PF04996 Succinylarginine dihydrolase CDG55_RS10640 PF00171 Aldehyde dehydrogenase family CDG55_RS10645 PF04958 Arginine N-succinyltransferase beta subunit CDG55_RS10650 PF00202 Aminotransferase class-III CDG55_RS10655 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CDG55_RS10655 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CDG55_RS10665 PF00106 short chain dehydrogenase CDG55_RS10675 PF00390 Malic enzyme, N-terminal domain CDG55_RS10675 PF03949 Malic enzyme, NAD binding domain CDG55_RS10680 PF02627 Carboxymuconolactone decarboxylase family CDG55_RS10690 PF16916 Dimerisation domain of Zinc Transporter CDG55_RS10690 PF01545 Cation efflux family CDG55_RS10695 PF01292 Prokaryotic cytochrome b561 CDG55_RS10700 PF00293 NUDIX domain CDG55_RS10700 PF09297 NADH pyrophosphatase zinc ribbon domain CDG55_RS10720 PF01272 Transcription elongation factor, GreA/GreB, C-term CDG55_RS10720 PF03449 Transcription elongation factor, N-terminal CDG55_RS10725 PF00497 Bacterial extracellular solute-binding proteins, family 3 CDG55_RS10725 PF01464 Transglycosylase SLT domain CDG55_RS10735 PF01171 PP-loop family CDG55_RS10740 PF01464 Transglycosylase SLT domain CDG55_RS10745 PF01435 Peptidase family M48 CDG55_RS10755 PF00873 AcrB/AcrD/AcrF family CDG55_RS10760 PF00884 Sulfatase CDG55_RS10765 PF04973 Nicotinamide mononucleotide transporter CDG55_RS10770 PF00561 alpha/beta hydrolase fold CDG55_RS10780 PF00092 von Willebrand factor type A domain CDG55_RS10780 PF12034 Domain of unknown function (DUF3520) CDG55_RS10780 PF12450 von Willebrand factor CDG55_RS10785 PF00809 Pterin binding enzyme CDG55_RS10795 PF01434 Peptidase family M41 CDG55_RS10795 PF06480 FtsH Extracellular CDG55_RS10795 PF00004 ATPase family associated with various cellular activities (AAA) CDG55_RS10795 PF17862 AAA+ lid domain CDG55_RS10800 PF01728 FtsJ-like methyltransferase CDG55_RS10805 PF01985 CRS1 / YhbY (CRM) domain CDG55_RS10820 PF00117 Glutamine amidotransferase class-I CDG55_RS10820 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CDG55_RS10825 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CDG55_RS10825 PF02142 MGS-like domain CDG55_RS10825 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CDG55_RS10830 PF03449 Transcription elongation factor, N-terminal CDG55_RS10830 PF01272 Transcription elongation factor, GreA/GreB, C-term CDG55_RS10840 PF00132 Bacterial transferase hexapeptide (six repeats) CDG55_RS10845 PF00582 Universal stress protein family CDG55_RS10850 PF04228 Putative neutral zinc metallopeptidase CDG55_RS10855 PF05661 Protein of unknown function (DUF808) CDG55_RS10860 PF00579 tRNA synthetases class I (W and Y) CDG55_RS10865 PF07290 Protein of unknown function (DUF1449) CDG55_RS10870 PF01145 SPFH domain / Band 7 family CDG55_RS10870 PF15975 Flotillin CDG55_RS10875 PF02629 CoA binding domain CDG55_RS10875 PF00549 CoA-ligase CDG55_RS10880 PF00549 CoA-ligase CDG55_RS10880 PF08442 ATP-grasp domain CDG55_RS10885 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDG55_RS10885 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDG55_RS10890 PF00364 Biotin-requiring enzyme CDG55_RS10890 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CDG55_RS10890 PF02817 e3 binding domain CDG55_RS10895 PF00676 Dehydrogenase E1 component CDG55_RS10895 PF02779 Transketolase, pyrimidine binding domain CDG55_RS10895 PF16870 2-oxoglutarate dehydrogenase C-terminal CDG55_RS10895 PF16078 2-oxoglutarate dehydrogenase N-terminus CDG55_RS10905 PF13085 2Fe-2S iron-sulfur cluster binding domain CDG55_RS10910 PF00890 FAD binding domain CDG55_RS10910 PF02910 Fumarate reductase flavoprotein C-term CDG55_RS10915 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CDG55_RS10920 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CDG55_RS10925 PF00285 Citrate synthase, C-terminal domain CDG55_RS10945 PF17773 UPF0176 acylphosphatase like domain CDG55_RS10945 PF00581 Rhodanese-like domain CDG55_RS10950 PF09335 SNARE associated Golgi protein CDG55_RS10970 PF00140 Sigma-70 factor, region 1.2 CDG55_RS10970 PF03979 Sigma-70 factor, region 1.1 CDG55_RS10970 PF04546 Sigma-70, non-essential region CDG55_RS10970 PF04542 Sigma-70 region 2 CDG55_RS10970 PF04539 Sigma-70 region 3 CDG55_RS10970 PF04545 Sigma-70, region 4 CDG55_RS10975 PF04359 Protein of unknown function (DUF493) CDG55_RS10980 PF03099 Biotin/lipoate A/B protein ligase family CDG55_RS10990 PF00465 Iron-containing alcohol dehydrogenase CDG55_RS10995 PF13520 Amino acid permease CDG55_RS11000 PF03358 NADPH-dependent FMN reductase CDG55_RS11005 PF01638 HxlR-like helix-turn-helix CDG55_RS11015 PF00588 SpoU rRNA Methylase family CDG55_RS11020 PF10414 Sirohaem synthase dimerisation region CDG55_RS11020 PF14824 Sirohaem biosynthesis protein central CDG55_RS11020 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CDG55_RS11025 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CDG55_RS11025 PF02403 Seryl-tRNA synthetase N-terminal domain CDG55_RS11035 PF03548 Outer membrane lipoprotein carrier protein LolA CDG55_RS11045 PF01016 Ribosomal L27 protein CDG55_RS11050 PF00829 Ribosomal prokaryotic L21 protein CDG55_RS11055 PF00348 Polyprenyl synthetase CDG55_RS11065 PF01569 PAP2 superfamily CDG55_RS11070 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CDG55_RS11070 PF00529 HlyD membrane-fusion protein of T1SS CDG55_RS11075 PF00873 AcrB/AcrD/AcrF family CDG55_RS11080 PF02321 Outer membrane efflux protein CDG55_RS11085 PF01906 Putative heavy-metal-binding CDG55_RS11090 PF01906 Putative heavy-metal-binding CDG55_RS11105 PF08264 Anticodon-binding domain of tRNA CDG55_RS11105 PF00133 tRNA synthetases class I (I, L, M and V) CDG55_RS11105 PF10458 Valyl tRNA synthetase tRNA binding arm CDG55_RS11135 PF00990 Diguanylate cyclase, GGDEF domain CDG55_RS11135 PF07694 5TMR of 5TMR-LYT CDG55_RS11140 PF00909 Ammonium Transporter Family CDG55_RS11155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDG55_RS11155 PF00512 His Kinase A (phospho-acceptor) domain CDG55_RS11155 PF08521 Two-component sensor kinase N-terminal CDG55_RS11160 PF00486 Transcriptional regulatory protein, C terminal CDG55_RS11160 PF00072 Response regulator receiver domain CDG55_RS11165 PF00884 Sulfatase CDG55_RS11165 PF08019 Phosphoethanolamine transferase EptA/EptB CDG55_RS11185 PF01734 Patatin-like phospholipase CDG55_RS11195 PF01145 SPFH domain / Band 7 family CDG55_RS11205 PF04237 YjbR CDG55_RS11210 PF00348 Polyprenyl synthetase CDG55_RS11215 PF04303 PrpF protein CDG55_RS11220 PF00324 Amino acid permease CDG55_RS11235 PF00120 Glutamine synthetase, catalytic domain CDG55_RS11240 PF01569 PAP2 superfamily CDG55_RS11245 PF12833 Helix-turn-helix domain CDG55_RS11245 PF02311 AraC-like ligand binding domain CDG55_RS11250 PF00171 Aldehyde dehydrogenase family CDG55_RS11255 PF00486 Transcriptional regulatory protein, C terminal CDG55_RS11255 PF00072 Response regulator receiver domain CDG55_RS11260 PF13493 Domain of unknown function (DUF4118) CDG55_RS11260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDG55_RS11260 PF00512 His Kinase A (phospho-acceptor) domain CDG55_RS11260 PF02702 Osmosensitive K+ channel His kinase sensor domain CDG55_RS11260 PF13492 GAF domain CDG55_RS11265 PF02669 K+-transporting ATPase, c chain CDG55_RS11275 PF03814 Potassium-transporting ATPase A subunit CDG55_RS11290 PF01507 Phosphoadenosine phosphosulfate reductase family CDG55_RS11295 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain CDG55_RS11295 PF06974 Protein of unknown function (DUF1298) CDG55_RS11305 PF10150 Ribonuclease E/G family CDG55_RS11305 PF00575 S1 RNA binding domain CDG55_RS11310 PF02545 Maf-like protein CDG55_RS11320 PF04085 rod shape-determining protein MreC CDG55_RS11330 PF02686 Glu-tRNAGln amidotransferase C subunit CDG55_RS11335 PF01425 Amidase CDG55_RS11340 PF02934 GatB/GatE catalytic domain CDG55_RS11340 PF02637 GatB domain CDG55_RS11360 PF05992 SbmA/BacA-like family CDG55_RS11365 PF01734 Patatin-like phospholipase CDG55_RS11370 PF01235 Sodium:alanine symporter family CDG55_RS11375 PF03616 Sodium/glutamate symporter CDG55_RS11385 PF00881 Nitroreductase family CDG55_RS11390 PF07690 Major Facilitator Superfamily CDG55_RS11395 PF12805 FUSC-like inner membrane protein yccS CDG55_RS11405 PF00667 FAD binding domain CDG55_RS11405 PF00258 Flavodoxin CDG55_RS11405 PF00175 Oxidoreductase NAD-binding domain CDG55_RS11450 PF17969 L,D-transpeptidase C-terminal domain CDG55_RS11450 PF03734 L,D-transpeptidase catalytic domain CDG55_RS11455 PF04304 Protein of unknown function (DUF454) CDG55_RS11465 PF08085 Entericidin EcnA/B family CDG55_RS11470 PF07687 Peptidase dimerisation domain CDG55_RS11470 PF01546 Peptidase family M20/M25/M40 CDG55_RS11480 PF01584 CheW-like domain CDG55_RS11480 PF01627 Hpt domain CDG55_RS11480 PF00072 Response regulator receiver domain CDG55_RS11480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDG55_RS11485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CDG55_RS11485 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CDG55_RS11490 PF01584 CheW-like domain CDG55_RS11495 PF00072 Response regulator receiver domain CDG55_RS11500 PF00072 Response regulator receiver domain CDG55_RS11510 PF04073 Aminoacyl-tRNA editing domain CDG55_RS11510 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CDG55_RS11510 PF03129 Anticodon binding domain CDG55_RS11515 PF08274 PhnA Zinc-Ribbon CDG55_RS11515 PF03831 PhnA domain CDG55_RS11535 PF01571 Aminomethyltransferase folate-binding domain CDG55_RS11560 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CDG55_RS11560 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CDG55_RS11560 PF06827 Zinc finger found in FPG and IleRS CDG55_RS11565 PF00639 PPIC-type PPIASE domain CDG55_RS11565 PF09312 SurA N-terminal domain CDG55_RS11575 PF01741 Large-conductance mechanosensitive channel, MscL CDG55_RS11580 PF03144 Elongation factor Tu domain 2 CDG55_RS11580 PF00009 Elongation factor Tu GTP binding domain CDG55_RS11580 PF00679 Elongation factor G C-terminus CDG55_RS11585 PF00860 Permease family CDG55_RS11590 PF05175 Methyltransferase small domain CDG55_RS11590 PF08468 Methyltransferase small domain N-terminal CDG55_RS11595 PF00324 Amino acid permease CDG55_RS11600 PF01139 tRNA-splicing ligase RtcB CDG55_RS11605 PF00691 OmpA family CDG55_RS11605 PF13505 Outer membrane protein beta-barrel domain CDG55_RS11615 PF00108 Thiolase, N-terminal domain CDG55_RS11615 PF02803 Thiolase, C-terminal domain CDG55_RS11625 PF00893 Small Multidrug Resistance protein CDG55_RS11635 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CDG55_RS11635 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CDG55_RS11645 PF02515 CoA-transferase family III CDG55_RS11650 PF02311 AraC-like ligand binding domain CDG55_RS11650 PF12833 Helix-turn-helix domain CDG55_RS11655 PF02803 Thiolase, C-terminal domain CDG55_RS11655 PF00108 Thiolase, N-terminal domain CDG55_RS11660 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CDG55_RS11660 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CDG55_RS11660 PF00378 Enoyl-CoA hydratase/isomerase CDG55_RS11685 PF13673 Acetyltransferase (GNAT) domain CDG55_RS11695 PF03006 Haemolysin-III related CDG55_RS11700 PF07690 Major Facilitator Superfamily CDG55_RS11700 PF00083 Sugar (and other) transporter CDG55_RS11715 PF02810 SEC-C motif CDG55_RS11715 PF07516 SecA Wing and Scaffold domain CDG55_RS11715 PF01043 SecA preprotein cross-linking domain CDG55_RS11715 PF07517 SecA DEAD-like domain CDG55_RS11720 PF10417 C-terminal domain of 1-Cys peroxiredoxin CDG55_RS11720 PF00578 AhpC/TSA family CDG55_RS11725 PF00753 Metallo-beta-lactamase superfamily CDG55_RS11745 PF08245 Mur ligase middle domain CDG55_RS11750 PF01039 Carboxyl transferase domain CDG55_RS11755 PF00290 Tryptophan synthase alpha chain CDG55_RS11780 PF00072 Response regulator receiver domain CDG55_RS11780 PF00990 Diguanylate cyclase, GGDEF domain CDG55_RS11785 PF00291 Pyridoxal-phosphate dependent enzyme CDG55_RS11790 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CDG55_RS11795 PF07715 TonB-dependent Receptor Plug Domain CDG55_RS11795 PF00593 TonB dependent receptor CDG55_RS11800 PF01923 Cobalamin adenosyltransferase CDG55_RS11820 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CDG55_RS11825 PF00072 Response regulator receiver domain CDG55_RS11825 PF00486 Transcriptional regulatory protein, C terminal CDG55_RS11830 PF00672 HAMP domain CDG55_RS11830 PF00512 His Kinase A (phospho-acceptor) domain CDG55_RS11830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDG55_RS11840 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CDG55_RS11840 PF12806 Acetyl-CoA dehydrogenase C-terminal like CDG55_RS11840 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CDG55_RS11840 PF02770 Acyl-CoA dehydrogenase, middle domain CDG55_RS11845 PF02770 Acyl-CoA dehydrogenase, middle domain CDG55_RS11845 PF12806 Acetyl-CoA dehydrogenase C-terminal like CDG55_RS11845 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CDG55_RS11845 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CDG55_RS11850 PF06146 Phosphate-starvation-inducible E CDG55_RS11875 PF07715 TonB-dependent Receptor Plug Domain CDG55_RS11875 PF00593 TonB dependent receptor CDG55_RS11885 PF02938 GAD domain CDG55_RS11885 PF01336 OB-fold nucleic acid binding domain CDG55_RS11885 PF00152 tRNA synthetases class II (D, K and N) CDG55_RS11900 PF03275 UDP-galactopyranose mutase CDG55_RS11925 PF11380 Stealth protein CR2, conserved region 2 CDG55_RS11925 PF17102 Stealth protein CR3, conserved region 3 CDG55_RS11925 PF17103 Stealth protein CR4, conserved region 4 CDG55_RS11925 PF17101 Stealth protein CR1, conserved region 1 CDG55_RS11935 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CDG55_RS11935 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CDG55_RS11940 PF01063 Amino-transferase class IV CDG55_RS11945 PF03710 Glutamate-ammonia ligase adenylyltransferase CDG55_RS11945 PF08335 GlnD PII-uridylyltransferase CDG55_RS11950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDG55_RS11950 PF00512 His Kinase A (phospho-acceptor) domain CDG55_RS11950 PF00672 HAMP domain CDG55_RS11950 PF13426 PAS domain CDG55_RS12010 PF13356 Arm DNA-binding domain CDG55_RS12010 PF00589 Phage integrase family CDG55_RS12020 PF02547 Queuosine biosynthesis protein CDG55_RS12035 PF01702 Queuine tRNA-ribosyltransferase CDG55_RS12040 PF02699 Preprotein translocase subunit CDG55_RS12045 PF02355 Protein export membrane protein CDG55_RS12045 PF13721 SecD export protein N-terminal TM region CDG55_RS12045 PF07549 SecD/SecF GG Motif CDG55_RS12050 PF07549 SecD/SecF GG Motif CDG55_RS12050 PF02355 Protein export membrane protein CDG55_RS12060 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CDG55_RS12060 PF01926 50S ribosome-binding GTPase CDG55_RS12065 PF13360 PQQ-like domain CDG55_RS12075 PF13393 Histidyl-tRNA synthetase CDG55_RS12075 PF03129 Anticodon binding domain CDG55_RS12080 PF04551 GcpE protein CDG55_RS12095 PF04055 Radical SAM superfamily CDG55_RS12100 PF00334 Nucleoside diphosphate kinase CDG55_RS12105 PF04384 Iron-sulphur cluster assembly CDG55_RS12110 PF01569 PAP2 superfamily CDG55_RS12115 PF13439 Glycosyltransferase Family 4 CDG55_RS12115 PF00534 Glycosyl transferases group 1 CDG55_RS12120 PF00149 Calcineurin-like phosphoesterase CDG55_RS12125 PF00398 Ribosomal RNA adenine dimethylase CDG55_RS12130 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CDG55_RS12140 PF00572 Ribosomal protein L13 CDG55_RS12145 PF00380 Ribosomal protein S9/S16 CDG55_RS12150 PF02798 Glutathione S-transferase, N-terminal domain CDG55_RS12150 PF00043 Glutathione S-transferase, C-terminal domain CDG55_RS12155 PF04386 Stringent starvation protein B CDG55_RS12185 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CDG55_RS12185 PF00364 Biotin-requiring enzyme CDG55_RS12185 PF00289 Biotin carboxylase, N-terminal domain CDG55_RS12185 PF02785 Biotin carboxylase C-terminal domain CDG55_RS12195 PF01966 HD domain CDG55_RS12200 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CDG55_RS12200 PF02770 Acyl-CoA dehydrogenase, middle domain CDG55_RS12200 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CDG55_RS12205 PF01039 Carboxyl transferase domain CDG55_RS12220 PF00440 Bacterial regulatory proteins, tetR family CDG55_RS12220 PF17932 Tetracyclin repressor-like, C-terminal domain CDG55_RS12245 PF02770 Acyl-CoA dehydrogenase, middle domain CDG55_RS12245 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CDG55_RS12245 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CDG55_RS12250 PF02770 Acyl-CoA dehydrogenase, middle domain CDG55_RS12250 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CDG55_RS12250 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CDG55_RS12295 PF01066 CDP-alcohol phosphatidyltransferase CDG55_RS12300 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CDG55_RS12320 PF00056 lactate/malate dehydrogenase, NAD binding domain CDG55_RS12320 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CDG55_RS12330 PF01464 Transglycosylase SLT domain CDG55_RS12330 PF01551 Peptidase family M23 CDG55_RS12330 PF10145 Phage-related minor tail protein CDG55_RS12335 PF00919 Uncharacterized protein family UPF0004 CDG55_RS12335 PF01938 TRAM domain CDG55_RS12335 PF04055 Radical SAM superfamily CDG55_RS12340 PF02562 PhoH-like protein CDG55_RS12345 PF02130 Uncharacterized protein family UPF0054 CDG55_RS12375 PF09234 Domain of unknown function (DUF1963) CDG55_RS12380 PF00303 Thymidylate synthase CDG55_RS12385 PF00186 Dihydrofolate reductase CDG55_RS12395 PF01625 Peptide methionine sulfoxide reductase CDG55_RS12405 PF01618 MotA/TolQ/ExbB proton channel family CDG55_RS12415 PF01842 ACT domain CDG55_RS12415 PF00551 Formyl transferase CDG55_RS12420 PF00440 Bacterial regulatory proteins, tetR family CDG55_RS12420 PF08360 QacR-like protein, C-terminal region CDG55_RS12425 PF00171 Aldehyde dehydrogenase family CDG55_RS12430 PF00830 Ribosomal L28 family CDG55_RS12435 PF00471 Ribosomal protein L33 CDG55_RS12440 PF00999 Sodium/hydrogen exchanger family CDG55_RS12440 PF02254 TrkA-N domain CDG55_RS12455 PF01207 Dihydrouridine synthase (Dus) CDG55_RS12470 PF00899 ThiF family CDG55_RS12480 PF01026 TatD related DNase CDG55_RS12485 PF11738 Protein of unknown function (DUF3298) CDG55_RS12485 PF13739 Deacetylase PdaC CDG55_RS12485 PF01522 Polysaccharide deacetylase CDG55_RS12495 PF00009 Elongation factor Tu GTP binding domain CDG55_RS12495 PF03144 Elongation factor Tu domain 2 CDG55_RS12495 PF16658 Class II release factor RF3, C-terminal domain CDG55_RS12500 PF02661 Fic/DOC family CDG55_RS12500 PF13784 Fic/DOC family N-terminal CDG55_RS12515 PF18273 Type III R-M EcoP15I C-terminal domain CDG55_RS12515 PF01555 DNA methylase CDG55_RS12650 PF00593 TonB dependent receptor CDG55_RS12650 PF07715 TonB-dependent Receptor Plug Domain CDG55_RS12655 PF03358 NADPH-dependent FMN reductase CDG55_RS12660 PF01758 Sodium Bile acid symporter family CDG55_RS12670 PF01022 Bacterial regulatory protein, arsR family CDG55_RS12675 PF03960 ArsC family CDG55_RS12680 PF00561 alpha/beta hydrolase fold CDG55_RS12685 PF00990 Diguanylate cyclase, GGDEF domain CDG55_RS12685 PF03707 Bacterial signalling protein N terminal repeat CDG55_RS12685 PF00563 EAL domain CDG55_RS12690 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CDG55_RS12690 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CDG55_RS12695 PF10369 Small subunit of acetolactate synthase CDG55_RS12700 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CDG55_RS12700 PF00205 Thiamine pyrophosphate enzyme, central domain CDG55_RS12700 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CDG55_RS12710 PF08264 Anticodon-binding domain of tRNA CDG55_RS12710 PF00133 tRNA synthetases class I (I, L, M and V) CDG55_RS12710 PF09334 tRNA synthetases class I (M) CDG55_RS12710 PF13603 Leucyl-tRNA synthetase, Domain 2 CDG55_RS12725 PF01814 Hemerythrin HHE cation binding domain CDG55_RS12730 PF02146 Sir2 family CDG55_RS12735 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CDG55_RS12740 PF00005 ABC transporter CDG55_RS12740 PF02687 FtsX-like permease family CDG55_RS12740 PF12704 MacB-like periplasmic core domain CDG55_RS12745 PF02321 Outer membrane efflux protein CDG55_RS12785 PF13361 UvrD-like helicase C-terminal domain CDG55_RS12785 PF00580 UvrD/REP helicase N-terminal domain CDG55_RS12805 PF08272 Topoisomerase I zinc-ribbon-like CDG55_RS12805 PF01751 Toprim domain CDG55_RS12805 PF01396 Topoisomerase DNA binding C4 zinc finger CDG55_RS12805 PF01131 DNA topoisomerase CDG55_RS12820 PF04102 SlyX CDG55_RS12825 PF12848 ABC transporter CDG55_RS12825 PF00005 ABC transporter CDG55_RS12825 PF16326 ABC transporter C-terminal domain CDG55_RS12830 PF01661 Macro domain CDG55_RS12835 PF03279 Bacterial lipid A biosynthesis acyltransferase CDG55_RS12845 PF01118 Semialdehyde dehydrogenase, NAD binding domain CDG55_RS12845 PF02774 Semialdehyde dehydrogenase, dimerisation domain CDG55_RS12865 PF01416 tRNA pseudouridine synthase CDG55_RS12875 PF01176 Translation initiation factor 1A / IF-1 CDG55_RS12890 PF00180 Isocitrate/isopropylmalate dehydrogenase CDG55_RS12900 PF00694 Aconitase C-terminal domain CDG55_RS12905 PF00330 Aconitase family (aconitate hydratase) CDG55_RS12915 PF03466 LysR substrate binding domain CDG55_RS12915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDG55_RS12945 PF00293 NUDIX domain CDG55_RS12950 PF02896 PEP-utilising enzyme, TIM barrel domain CDG55_RS12950 PF00391 PEP-utilising enzyme, mobile domain CDG55_RS12950 PF05524 PEP-utilising enzyme, N-terminal CDG55_RS12950 PF01590 GAF domain CDG55_RS12955 PF00199 Catalase CDG55_RS12955 PF06628 Catalase-related immune-responsive CDG55_RS12970 PF12706 Beta-lactamase superfamily domain CDG55_RS12975 PF03466 LysR substrate binding domain CDG55_RS12975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDG55_RS12990 PF13419 Haloacid dehalogenase-like hydrolase CDG55_RS12995 PF00849 RNA pseudouridylate synthase CDG55_RS12995 PF01479 S4 domain CDG55_RS13005 PF00575 S1 RNA binding domain CDG55_RS13005 PF12111 Polyribonucleotide phosphorylase C terminal CDG55_RS13005 PF10150 Ribonuclease E/G family CDG55_RS13010 PF13193 AMP-binding enzyme C-terminal domain CDG55_RS13010 PF00501 AMP-binding enzyme CDG55_RS13025 PF06969 HemN C-terminal domain CDG55_RS13025 PF04055 Radical SAM superfamily CDG55_RS13035 PF01554 MatE CDG55_RS13040 PF03109 ABC1 family CDG55_RS13045 PF01197 Ribosomal protein L31 CDG55_RS13055 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CDG55_RS13075 PF01613 Flavin reductase like domain CDG55_RS13085 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDG55_RS13085 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CDG55_RS13085 PF13247 4Fe-4S dicluster domain CDG55_RS13095 PF03884 DNA gyrase inhibitor YacG CDG55_RS13100 PF00753 Metallo-beta-lactamase superfamily CDG55_RS13105 PF00762 Ferrochelatase CDG55_RS13115 PF01177 Asp/Glu/Hydantoin racemase CDG55_RS13140 PF04542 Sigma-70 region 2 CDG55_RS13140 PF08281 Sigma-70, region 4 CDG55_RS13150 PF05114 Protein of unknown function (DUF692) CDG55_RS13165 PF01810 LysE type translocator CDG55_RS13170 PF01206 Sulfurtransferase TusA CDG55_RS13175 PF00571 CBS domain CDG55_RS13175 PF03471 Transporter associated domain CDG55_RS13180 PF00795 Carbon-nitrogen hydrolase CDG55_RS13190 PF08334 Type II secretion system (T2SS), protein G CDG55_RS13190 PF07963 Prokaryotic N-terminal methylation motif CDG55_RS13195 PF00482 Type II secretion system (T2SS), protein F CDG55_RS13200 PF18074 Primosomal protein N C-terminal domain CDG55_RS13200 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CDG55_RS13200 PF17764 3′ DNA-binding domain (3′BD) CDG55_RS13200 PF00271 Helicase conserved C-terminal domain CDG55_RS13200 PF00270 DEAD/DEAH box helicase CDG55_RS13205 PF07715 TonB-dependent Receptor Plug Domain CDG55_RS13205 PF00593 TonB dependent receptor CDG55_RS13210 PF00999 Sodium/hydrogen exchanger family CDG55_RS13210 PF02254 TrkA-N domain CDG55_RS13215 PF01430 Hsp33 protein CDG55_RS13220 PF01556 DnaJ C terminal domain CDG55_RS13220 PF00226 DnaJ domain CDG55_RS13230 PF01544 CorA-like Mg2+ transporter protein CDG55_RS13235 PF00375 Sodium:dicarboxylate symporter family CDG55_RS13240 PF00013 KH domain CDG55_RS13240 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CDG55_RS13240 PF01138 3' exoribonuclease family, domain 1 CDG55_RS13240 PF03725 3' exoribonuclease family, domain 2 CDG55_RS13240 PF00575 S1 RNA binding domain CDG55_RS13245 PF00312 Ribosomal protein S15 CDG55_RS13250 PF00144 Beta-lactamase CDG55_RS13255 PF13538 UvrD-like helicase C-terminal domain CDG55_RS13260 PF13361 UvrD-like helicase C-terminal domain CDG55_RS13260 PF12705 PD-(D/E)XK nuclease superfamily CDG55_RS13260 PF00580 UvrD/REP helicase N-terminal domain CDG55_RS13265 PF17946 RecC C-terminal domain CDG55_RS13275 PF03976 Polyphosphate kinase 2 (PPK2) CDG55_RS13285 PF01209 ubiE/COQ5 methyltransferase family CDG55_RS13295 PF03109 ABC1 family CDG55_RS13315 PF01502 Phosphoribosyl-AMP cyclohydrolase CDG55_RS13325 PF02463 RecF/RecN/SMC N terminal domain CDG55_RS13330 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CDG55_RS13330 PF00361 Proton-conducting membrane transporter CDG55_RS13330 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter CDG55_RS13330 PF13244 Domain of unknown function (DUF4040) CDG55_RS13335 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CDG55_RS13340 PF00361 Proton-conducting membrane transporter CDG55_RS13345 PF01899 Na+/H+ ion antiporter subunit CDG55_RS13350 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) CDG55_RS13355 PF03334 Na+/H+ antiporter subunit CDG55_RS13360 PF02033 Ribosome-binding factor A CDG55_RS13365 PF04760 Translation initiation factor IF-2, N-terminal region CDG55_RS13365 PF08364 Bacterial translation initiation factor IF-2 associated region CDG55_RS13365 PF00009 Elongation factor Tu GTP binding domain CDG55_RS13365 PF11987 Translation-initiation factor 2 CDG55_RS13370 PF00575 S1 RNA binding domain CDG55_RS13370 PF08529 NusA N-terminal domain CDG55_RS13370 PF13184 NusA-like KH domain CDG55_RS13375 PF02576 RimP N-terminal domain CDG55_RS13375 PF17384 RimP C-terminal SH3 domain CDG55_RS13395 PF03840 Preprotein translocase SecG subunit CDG55_RS13400 PF00121 Triosephosphate isomerase CDG55_RS13405 PF00437 Type II/IV secretion system protein CDG55_RS13405 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CDG55_RS13410 PF00482 Type II secretion system (T2SS), protein F CDG55_RS13415 PF01478 Type IV leader peptidase family CDG55_RS13415 PF06750 Bacterial Peptidase A24 N-terminal domain CDG55_RS13420 PF01121 Dephospho-CoA kinase CDG55_RS13430 PF00588 SpoU rRNA Methylase family CDG55_RS13430 PF08032 RNA 2'-O ribose methyltransferase substrate binding CDG55_RS13435 PF06865 Pyrimidine/purine nucleoside phosphorylase CDG55_RS13440 PF02463 RecF/RecN/SMC N terminal domain CDG55_RS13445 PF02622 Uncharacterized ACR, COG1678 CDG55_RS13450 PF03652 Holliday junction resolvase CDG55_RS13455 PF13533 Biotin-lipoyl like CDG55_RS13485 PF01625 Peptide methionine sulfoxide reductase CDG55_RS13495 PF01641 SelR domain CDG55_RS13500 PF00462 Glutaredoxin CDG55_RS13505 PF01625 Peptide methionine sulfoxide reductase CDG55_RS13510 PF02311 AraC-like ligand binding domain CDG55_RS13510 PF12833 Helix-turn-helix domain CDG55_RS13535 PF02803 Thiolase, C-terminal domain CDG55_RS13535 PF00108 Thiolase, N-terminal domain CDG55_RS13540 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CDG55_RS13540 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CDG55_RS13540 PF00378 Enoyl-CoA hydratase/isomerase CDG55_RS13560 PF01066 CDP-alcohol phosphatidyltransferase CDG55_RS13570 PF01541 GIY-YIG catalytic domain CDG55_RS13570 PF08459 UvrC Helix-hairpin-helix N-terminal CDG55_RS13570 PF02151 UvrB/uvrC motif CDG55_RS13580 PF00990 Diguanylate cyclase, GGDEF domain CDG55_RS13585 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CDG55_RS13585 PF00378 Enoyl-CoA hydratase/isomerase CDG55_RS13585 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CDG55_RS13590 PF00108 Thiolase, N-terminal domain CDG55_RS13590 PF02803 Thiolase, C-terminal domain CDG55_RS13610 PF01323 DSBA-like thioredoxin domain CDG55_RS13630 PF00183 Hsp90 protein CDG55_RS13630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDG55_RS13645 PF03553 Na+/H+ antiporter family CDG55_RS13645 PF13726 Na+-H+ antiporter family CDG55_RS13665 PF04983 RNA polymerase Rpb1, domain 3 CDG55_RS13665 PF00623 RNA polymerase Rpb1, domain 2 CDG55_RS13665 PF05000 RNA polymerase Rpb1, domain 4 CDG55_RS13665 PF04998 RNA polymerase Rpb1, domain 5 CDG55_RS13665 PF04997 RNA polymerase Rpb1, domain 1 CDG55_RS13670 PF04561 RNA polymerase Rpb2, domain 2 CDG55_RS13670 PF04565 RNA polymerase Rpb2, domain 3 CDG55_RS13670 PF10385 RNA polymerase beta subunit external 1 domain CDG55_RS13670 PF00562 RNA polymerase Rpb2, domain 6 CDG55_RS13670 PF04560 RNA polymerase Rpb2, domain 7 CDG55_RS13670 PF04563 RNA polymerase beta subunit CDG55_RS13675 PF16320 Ribosomal protein L7/L12 dimerisation domain CDG55_RS13675 PF00542 Ribosomal protein L7/L12 C-terminal domain CDG55_RS13680 PF00466 Ribosomal protein L10 CDG55_RS13685 PF00687 Ribosomal protein L1p/L10e family CDG55_RS13690 PF03946 Ribosomal protein L11, N-terminal domain CDG55_RS13690 PF00298 Ribosomal protein L11, RNA binding domain CDG55_RS13695 PF00467 KOW motif CDG55_RS13695 PF02357 Transcription termination factor nusG CDG55_RS13700 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CDG55_RS13710 PF00009 Elongation factor Tu GTP binding domain CDG55_RS13710 PF03143 Elongation factor Tu C-terminal domain CDG55_RS13710 PF03144 Elongation factor Tu domain 2 CDG55_RS13735 PF04715 Anthranilate synthase component I, N terminal region CDG55_RS13735 PF00425 chorismate binding enzyme CDG55_RS13740 PF13419 Haloacid dehalogenase-like hydrolase CDG55_RS13750 PF00263 Bacterial type II and III secretion system protein CDG55_RS13750 PF03958 Bacterial type II/III secretion system short domain CDG55_RS13765 PF00816 H-NS histone family CDG55_RS13790 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CDG55_RS13790 PF03900 Porphobilinogen deaminase, C-terminal domain CDG55_RS13795 PF00072 Response regulator receiver domain CDG55_RS13795 PF04397 LytTr DNA-binding domain CDG55_RS13800 PF07694 5TMR of 5TMR-LYT CDG55_RS13800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDG55_RS13800 PF06580 Histidine kinase CDG55_RS13805 PF14698 Argininosuccinate lyase C-terminal CDG55_RS13805 PF00206 Lyase CDG55_RS13810 PF04362 Bacterial Fe(2+) trafficking CDG55_RS13815 PF01895 PhoU domain CDG55_RS13820 PF13667 ThiC-associated domain CDG55_RS13820 PF01964 Radical SAM ThiC family CDG55_RS13825 PF00293 NUDIX domain CDG55_RS13830 PF00149 Calcineurin-like phosphoesterase CDG55_RS13835 PF01258 Prokaryotic dksA/traR C4-type zinc finger CDG55_RS13840 PF00749 tRNA synthetases class I (E and Q), catalytic domain CDG55_RS13845 PF01098 Cell cycle protein CDG55_RS13850 PF08245 Mur ligase middle domain CDG55_RS13850 PF02875 Mur ligase family, glutamate ligase domain CDG55_RS13865 PF07670 Nucleoside recognition CDG55_RS13865 PF07664 Ferrous iron transport protein B C terminus CDG55_RS13865 PF02421 Ferrous iron transport protein B CDG55_RS13875 PF02899 Phage integrase, N-terminal SAM-like domain CDG55_RS13875 PF00589 Phage integrase family CDG55_RS13880 PF10411 Disulfide bond isomerase protein N-terminus CDG55_RS13880 PF13098 Thioredoxin-like domain CDG55_RS13885 PF01842 ACT domain CDG55_RS13885 PF00742 Homoserine dehydrogenase CDG55_RS13885 PF03447 Homoserine dehydrogenase, NAD binding domain CDG55_RS13890 PF00291 Pyridoxal-phosphate dependent enzyme CDG55_RS13900 PF00768 D-alanyl-D-alanine carboxypeptidase CDG55_RS13905 PF00072 Response regulator receiver domain CDG55_RS13905 PF00196 Bacterial regulatory proteins, luxR family CDG55_RS13910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDG55_RS13910 PF00512 His Kinase A (phospho-acceptor) domain CDG55_RS13915 PF02954 Bacterial regulatory protein, Fis family CDG55_RS13915 PF00072 Response regulator receiver domain CDG55_RS13915 PF00158 Sigma-54 interaction domain CDG55_RS13920 PF13180 PDZ domain CDG55_RS13920 PF03572 Peptidase family S41 CDG55_RS13925 PF01676 Metalloenzyme superfamily CDG55_RS13925 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CDG55_RS13930 PF03739 Lipopolysaccharide export system permease LptF/LptG CDG55_RS13935 PF03739 Lipopolysaccharide export system permease LptF/LptG CDG55_RS13940 PF02789 Cytosol aminopeptidase family, N-terminal domain CDG55_RS13940 PF00883 Cytosol aminopeptidase family, catalytic domain CDG55_RS13955 PF00677 Lumazine binding domain CDG55_RS13970 PF01872 RibD C-terminal domain CDG55_RS13970 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CDG55_RS13975 PF03477 ATP cone domain CDG55_RS13980 PF00909 Ammonium Transporter Family CDG55_RS13985 PF00543 Nitrogen regulatory protein P-II CDG55_RS13995 PF01078 Magnesium chelatase, subunit ChlI CDG55_RS13995 PF13335 Magnesium chelatase, subunit ChlI C-terminal CDG55_RS14010 PF03573 outer membrane porin, OprD family CDG55_RS14015 PF00719 Inorganic pyrophosphatase CDG55_RS14030 PF13193 AMP-binding enzyme C-terminal domain CDG55_RS14030 PF00501 AMP-binding enzyme CDG55_RS14035 PF00521 DNA gyrase/topoisomerase IV, subunit A CDG55_RS14035 PF03989 DNA gyrase C-terminal domain, beta-propeller CDG55_RS14040 PF03458 UPF0126 domain CDG55_RS14045 PF02810 SEC-C motif CDG55_RS14050 PF03471 Transporter associated domain CDG55_RS14050 PF03741 Integral membrane protein TerC family CDG55_RS14055 PF03641 Possible lysine decarboxylase CDG55_RS14065 PF07690 Major Facilitator Superfamily CDG55_RS14075 PF11798 IMS family HHH motif CDG55_RS14075 PF11799 impB/mucB/samB family C-terminal domain CDG55_RS14075 PF00817 impB/mucB/samB family CDG55_RS14080 PF00486 Transcriptional regulatory protein, C terminal CDG55_RS14080 PF00072 Response regulator receiver domain CDG55_RS14090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDG55_RS14090 PF00512 His Kinase A (phospho-acceptor) domain CDG55_RS14090 PF00672 HAMP domain CDG55_RS14095 PF06123 Inner membrane protein CreD CDG55_RS14115 PF08497 Radical SAM N-terminal CDG55_RS14115 PF04055 Radical SAM superfamily CDG55_RS14115 PF11842 Domain of unknown function (DUF3362) CDG55_RS14125 PF07690 Major Facilitator Superfamily CDG55_RS14135 PF00291 Pyridoxal-phosphate dependent enzyme CDG55_RS14170 PF02028 BCCT, betaine/carnitine/choline family transporter CDG55_RS14190 PF00474 Sodium:solute symporter family CDG55_RS14195 PF04341 Protein of unknown function, DUF485 CDG55_RS14200 PF00072 Response regulator receiver domain CDG55_RS14200 PF09456 RcsC Alpha-Beta-Loop (ABL) CDG55_RS14200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDG55_RS14200 PF00512 His Kinase A (phospho-acceptor) domain CDG55_RS14220 PF01327 Polypeptide deformylase CDG55_RS14225 PF01476 LysM domain CDG55_RS14230 PF02481 DNA recombination-mediator protein A CDG55_RS14230 PF17782 DprA winged helix domain CDG55_RS14235 PF01300 Telomere recombination CDG55_RS14255 PF00255 Glutathione peroxidase CDG55_RS14265 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CDG55_RS14270 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CDG55_RS14270 PF02874 ATP synthase alpha/beta family, beta-barrel domain CDG55_RS14275 PF00231 ATP synthase CDG55_RS14280 PF00306 ATP synthase alpha/beta chain, C terminal domain CDG55_RS14280 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CDG55_RS14280 PF02874 ATP synthase alpha/beta family, beta-barrel domain CDG55_RS14285 PF00213 ATP synthase delta (OSCP) subunit CDG55_RS14290 PF00430 ATP synthase B/B' CF(0) CDG55_RS14295 PF00137 ATP synthase subunit C CDG55_RS14300 PF00119 ATP synthase A chain CDG55_RS14320 PF00005 ABC transporter CDG55_RS14325 PF00950 ABC 3 transport family CDG55_RS14330 PF04261 Dyp-type peroxidase family CDG55_RS14340 PF03485 Arginyl tRNA synthetase N terminal domain CDG55_RS14340 PF00750 tRNA synthetases class I (R) CDG55_RS14340 PF05746 DALR anticodon binding domain CDG55_RS14360 PF05726 Pirin C-terminal cupin domain CDG55_RS14360 PF02678 Pirin CDG55_RS14380 PF02540 NAD synthase CDG55_RS14380 PF00117 Glutamine amidotransferase class-I CDG55_RS14380 PF00958 GMP synthase C terminal domain CDG55_RS14395 PF04286 Protein of unknown function (DUF445) CDG55_RS14405 PF07681 DoxX CDG55_RS14410 PF09335 SNARE associated Golgi protein CDG55_RS14425 PF13614 AAA domain CDG55_RS14435 PF01722 BolA-like protein CDG55_RS14470 PF07120 Protein of unknown function (DUF1376) CDG55_RS14485 PF09615 CRISPR-associated protein (Cas_Csy3) CDG55_RS14490 PF09614 CRISPR-associated protein (Cas_Csy2) CDG55_RS14495 PF09611 CRISPR-associated protein (Cas_Csy1) CDG55_RS14500 PF18019 HD domain CDG55_RS14505 PF01867 CRISPR associated protein Cas1 CDG55_RS14530 PF00271 Helicase conserved C-terminal domain CDG55_RS14530 PF00176 SNF2 family N-terminal domain CDG55_RS14530 PF12419 SNF2 Helicase protein CDG55_RS14540 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system CDG55_RS14585 PF04221 RelB antitoxin CDG55_RS14590 PF03471 Transporter associated domain CDG55_RS14590 PF03741 Integral membrane protein TerC family CDG55_RS14595 PF13358 DDE superfamily endonuclease CDG55_RS14625 PF00324 Amino acid permease CDG55_RS14630 PF01042 Endoribonuclease L-PSP CDG55_RS14635 PF00842 Alanine racemase, C-terminal domain CDG55_RS14635 PF01168 Alanine racemase, N-terminal domain CDG55_RS14640 PF01266 FAD dependent oxidoreductase CDG55_RS14645 PF01037 Lrp/AsnC ligand binding domain CDG55_RS14655 PF00849 RNA pseudouridylate synthase CDG55_RS14685 PF02463 RecF/RecN/SMC N terminal domain CDG55_RS14690 PF00330 Aconitase family (aconitate hydratase) CDG55_RS14690 PF00694 Aconitase C-terminal domain CDG55_RS14695 PF00285 Citrate synthase, C-terminal domain CDG55_RS14705 PF00392 Bacterial regulatory proteins, gntR family CDG55_RS14705 PF07729 FCD domain CDG55_RS14710 PF00155 Aminotransferase class I and II CDG55_RS14715 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CDG55_RS14715 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CDG55_RS14715 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CDG55_RS14715 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CDG55_RS14720 PF16363 GDP-mannose 4,6 dehydratase CDG55_RS14725 PF00342 Phosphoglucose isomerase CDG55_RS14730 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CDG55_RS14730 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CDG55_RS14730 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CDG55_RS14735 PF00483 Nucleotidyl transferase CDG55_RS14740 PF02719 Polysaccharide biosynthesis protein CDG55_RS14750 PF00953 Glycosyl transferase family 4 CDG55_RS14755 PF01370 NAD dependent epimerase/dehydratase family CDG55_RS14760 PF13579 Glycosyl transferase 4-like domain CDG55_RS14765 PF02350 UDP-N-acetylglucosamine 2-epimerase CDG55_RS14770 PF01370 NAD dependent epimerase/dehydratase family CDG55_RS14775 PF08485 Polysaccharide biosynthesis protein C-terminal CDG55_RS14775 PF02719 Polysaccharide biosynthesis protein CDG55_RS14785 PF00535 Glycosyl transferase family 2 CDG55_RS14795 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CDG55_RS14795 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CDG55_RS14795 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CDG55_RS14805 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CDG55_RS14805 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CDG55_RS14805 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CDG55_RS14815 PF02563 Polysaccharide biosynthesis/export protein CDG55_RS14815 PF10531 SLBB domain CDG55_RS14815 PF18412 Outer-membrane lipoprotein Wza C-terminal domain CDG55_RS14820 PF01451 Low molecular weight phosphotyrosine protein phosphatase CDG55_RS14825 PF13807 G-rich domain on putative tyrosine kinase CDG55_RS14825 PF13614 AAA domain CDG55_RS14825 PF02706 Chain length determinant protein CDG55_RS14830 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CDG55_RS14830 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CDG55_RS14835 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CDG55_RS14835 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CDG55_RS14840 PF03023 Lipid II flippase MurJ CDG55_RS14845 PF01510 N-acetylmuramoyl-L-alanine amidase CDG55_RS14850 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CDG55_RS14850 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CDG55_RS14855 PF03725 3' exoribonuclease family, domain 2 CDG55_RS14855 PF01138 3' exoribonuclease family, domain 1 CDG55_RS14860 PF00487 Fatty acid desaturase CDG55_RS14865 PF00175 Oxidoreductase NAD-binding domain CDG55_RS14870 PF00440 Bacterial regulatory proteins, tetR family CDG55_RS14875 PF08360 QacR-like protein, C-terminal region CDG55_RS14875 PF00440 Bacterial regulatory proteins, tetR family CDG55_RS14880 PF01323 DSBA-like thioredoxin domain CDG55_RS14890 PF13419 Haloacid dehalogenase-like hydrolase CDG55_RS14895 PF00106 short chain dehydrogenase CDG55_RS14905 PF00696 Amino acid kinase family CDG55_RS14905 PF00583 Acetyltransferase (GNAT) family CDG55_RS14910 PF09084 NMT1/THI5 like CDG55_RS14915 PF00296 Luciferase-like monooxygenase CDG55_RS14920 PF00528 Binding-protein-dependent transport system inner membrane component CDG55_RS14925 PF00005 ABC transporter CDG55_RS14930 PF17938 Tetracyclin repressor-like, C-terminal domain CDG55_RS14930 PF00440 Bacterial regulatory proteins, tetR family CDG55_RS14935 PF05230 MASE2 domain CDG55_RS14935 PF00990 Diguanylate cyclase, GGDEF domain CDG55_RS14940 PF01048 Phosphorylase superfamily CDG55_RS14945 PF06574 FAD synthetase CDG55_RS14945 PF01687 Riboflavin kinase CDG55_RS14950 PF08264 Anticodon-binding domain of tRNA CDG55_RS14950 PF06827 Zinc finger found in FPG and IleRS CDG55_RS14950 PF00133 tRNA synthetases class I (I, L, M and V) CDG55_RS14955 PF01252 Signal peptidase (SPase) II CDG55_RS14960 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CDG55_RS14965 PF03358 NADPH-dependent FMN reductase CDG55_RS15005 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CDG55_RS15010 PF07859 alpha/beta hydrolase fold CDG55_RS15025 PF01025 GrpE CDG55_RS15030 PF00012 Hsp70 protein CDG55_RS15055 PF13406 Transglycosylase SLT domain CDG55_RS15060 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CDG55_RS15060 PF02222 ATP-grasp domain CDG55_RS15065 PF00731 AIR carboxylase CDG55_RS15075 PF01225 Mur ligase family, catalytic domain CDG55_RS15075 PF02875 Mur ligase family, glutamate ligase domain CDG55_RS15075 PF08245 Mur ligase middle domain CDG55_RS15085 PF00106 short chain dehydrogenase CDG55_RS15100 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CDG55_RS15100 PF02770 Acyl-CoA dehydrogenase, middle domain CDG55_RS15100 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CDG55_RS15105 PF03466 LysR substrate binding domain CDG55_RS15105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDG55_RS15110 PF03741 Integral membrane protein TerC family CDG55_RS15120 PF03738 Glutathionylspermidine synthase preATP-grasp CDG55_RS15130 PF01979 Amidohydrolase family CDG55_RS15135 PF00156 Phosphoribosyl transferase domain CDG55_RS15145 PF10411 Disulfide bond isomerase protein N-terminus CDG55_RS15145 PF13098 Thioredoxin-like domain CDG55_RS15150 PF00437 Type II/IV secretion system protein CDG55_RS15160 PF12631 MnmE helical domain CDG55_RS15160 PF10396 GTP-binding protein TrmE N-terminus CDG55_RS15160 PF01926 50S ribosome-binding GTPase CDG55_RS15165 PF02096 60Kd inner membrane protein CDG55_RS15165 PF14849 YidC periplasmic domain CDG55_RS15170 PF01809 Putative membrane protein insertion efficiency factor CDG55_RS15175 PF00825 Ribonuclease P CDG55_RS15180 PF00468 Ribosomal protein L34