locus-tag class description C9E88_RS00005 PF00593 TonB dependent receptor C9E88_RS00005 PF07715 TonB-dependent Receptor Plug Domain C9E88_RS00010 PF03573 outer membrane porin, OprD family C9E88_RS00020 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C9E88_RS00020 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C9E88_RS00020 PF02770 Acyl-CoA dehydrogenase, middle domain C9E88_RS00020 PF12806 Acetyl-CoA dehydrogenase C-terminal like C9E88_RS00025 PF00501 AMP-binding enzyme C9E88_RS00025 PF13193 AMP-binding enzyme C-terminal domain C9E88_RS00030 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C9E88_RS00030 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C9E88_RS00030 PF00378 Enoyl-CoA hydratase/isomerase C9E88_RS00035 PF07690 Major Facilitator Superfamily C9E88_RS00045 PF00440 Bacterial regulatory proteins, tetR family C9E88_RS00045 PF08360 QacR-like protein, C-terminal region C9E88_RS00090 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C9E88_RS00090 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C9E88_RS00095 PF07690 Major Facilitator Superfamily C9E88_RS00100 PF00529 HlyD membrane-fusion protein of T1SS C9E88_RS00100 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C9E88_RS00105 PF03061 Thioesterase superfamily C9E88_RS00110 PF00490 Delta-aminolevulinic acid dehydratase C9E88_RS00120 PF01266 FAD dependent oxidoreductase C9E88_RS00140 PF00149 Calcineurin-like phosphoesterase C9E88_RS00140 PF12320 Type 5 capsule protein repressor C-terminal domain C9E88_RS00150 PF01168 Alanine racemase, N-terminal domain C9E88_RS00155 PF00437 Type II/IV secretion system protein C9E88_RS00160 PF00437 Type II/IV secretion system protein C9E88_RS00165 PF01475 Ferric uptake regulator family C9E88_RS00170 PF04355 SmpA / OmlA family C9E88_RS00175 PF03658 RnfH family Ubiquitin C9E88_RS00185 PF01814 Hemerythrin HHE cation binding domain C9E88_RS00190 PF13230 Glutamine amidotransferases class-II C9E88_RS00200 PF00696 Amino acid kinase family C9E88_RS00205 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C9E88_RS00205 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C9E88_RS00205 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C9E88_RS00205 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C9E88_RS00210 PF00692 dUTPase C9E88_RS00215 PF00580 UvrD/REP helicase N-terminal domain C9E88_RS00215 PF13361 UvrD-like helicase C-terminal domain C9E88_RS00230 PF00361 Proton-conducting membrane transporter C9E88_RS00235 PF00361 Proton-conducting membrane transporter C9E88_RS00240 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus C9E88_RS00240 PF00361 Proton-conducting membrane transporter C9E88_RS00245 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L C9E88_RS00250 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 C9E88_RS00255 PF12838 4Fe-4S dicluster domain C9E88_RS00260 PF00146 NADH dehydrogenase C9E88_RS00265 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C9E88_RS00265 PF00384 Molybdopterin oxidoreductase C9E88_RS00265 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region C9E88_RS00270 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit C9E88_RS00270 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region C9E88_RS00270 PF10531 SLBB domain C9E88_RS00280 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit C9E88_RS00280 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit C9E88_RS00285 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit C9E88_RS00290 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 C9E88_RS00300 PF00672 HAMP domain C9E88_RS00300 PF00512 His Kinase A (phospho-acceptor) domain C9E88_RS00300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9E88_RS00305 PF00486 Transcriptional regulatory protein, C terminal C9E88_RS00305 PF00072 Response regulator receiver domain C9E88_RS00310 PF00317 Ribonucleotide reductase, all-alpha domain C9E88_RS00310 PF02867 Ribonucleotide reductase, barrel domain C9E88_RS00310 PF03477 ATP cone domain C9E88_RS00315 PF00268 Ribonucleotide reductase, small chain C9E88_RS00325 PF07715 TonB-dependent Receptor Plug Domain C9E88_RS00325 PF00593 TonB dependent receptor C9E88_RS00330 PF01011 PQQ enzyme repeat C9E88_RS00335 PF04966 Carbohydrate-selective porin, OprB family C9E88_RS00350 PF13419 Haloacid dehalogenase-like hydrolase C9E88_RS00355 PF02581 Thiamine monophosphate synthase C9E88_RS00355 PF08543 Phosphomethylpyrimidine kinase C9E88_RS00355 PF03070 TENA/THI-4/PQQC family C9E88_RS00360 PF06674 Protein of unknown function (DUF1176) C9E88_RS00365 PF01594 AI-2E family transporter C9E88_RS00380 PF07411 Domain of unknown function (DUF1508) C9E88_RS00390 PF03831 PhnA domain C9E88_RS00390 PF08274 PhnA Zinc-Ribbon C9E88_RS00405 PF00849 RNA pseudouridylate synthase C9E88_RS00450 PF00694 Aconitase C-terminal domain C9E88_RS00450 PF00330 Aconitase family (aconitate hydratase) C9E88_RS00455 PF01571 Aminomethyltransferase folate-binding domain C9E88_RS00495 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C9E88_RS00500 PF04966 Carbohydrate-selective porin, OprB family C9E88_RS00505 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain C9E88_RS00505 PF06827 Zinc finger found in FPG and IleRS C9E88_RS00505 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain C9E88_RS00515 PF09334 tRNA synthetases class I (M) C9E88_RS00515 PF01588 Putative tRNA binding domain C9E88_RS00525 PF05643 Putative bacterial lipoprotein (DUF799) C9E88_RS00535 PF03783 Curli production assembly/transport component CsgG C9E88_RS00565 PF13533 Biotin-lipoyl like C9E88_RS00580 PF05552 Conserved TM helix C9E88_RS00585 PF05985 Ethanolamine ammonia-lyase light chain (EutC) C9E88_RS00590 PF06751 Ethanolamine ammonia lyase large subunit (EutB) C9E88_RS00595 PF13520 Amino acid permease C9E88_RS00605 PF01741 Large-conductance mechanosensitive channel, MscL C9E88_RS00610 PF00679 Elongation factor G C-terminus C9E88_RS00610 PF03144 Elongation factor Tu domain 2 C9E88_RS00610 PF00009 Elongation factor Tu GTP binding domain C9E88_RS00615 PF00860 Permease family C9E88_RS00620 PF05175 Methyltransferase small domain C9E88_RS00620 PF08468 Methyltransferase small domain N-terminal C9E88_RS00625 PF00324 Amino acid permease C9E88_RS00635 PF13505 Outer membrane protein beta-barrel domain C9E88_RS00635 PF00691 OmpA family C9E88_RS00640 PF07963 Prokaryotic N-terminal methylation motif C9E88_RS00640 PF00114 Pilin (bacterial filament) C9E88_RS00645 PF00108 Thiolase, N-terminal domain C9E88_RS00645 PF02803 Thiolase, C-terminal domain C9E88_RS00655 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase C9E88_RS00665 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C9E88_RS00665 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C9E88_RS00670 PF02515 CoA-transferase family III C9E88_RS00675 PF02311 AraC-like ligand binding domain C9E88_RS00675 PF12833 Helix-turn-helix domain C9E88_RS00685 PF02803 Thiolase, C-terminal domain C9E88_RS00685 PF00108 Thiolase, N-terminal domain C9E88_RS00690 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C9E88_RS00690 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C9E88_RS00690 PF00378 Enoyl-CoA hydratase/isomerase C9E88_RS00720 PF03006 Haemolysin-III related C9E88_RS00725 PF00083 Sugar (and other) transporter C9E88_RS00725 PF07690 Major Facilitator Superfamily C9E88_RS00735 PF10518 TAT (twin-arginine translocation) pathway signal sequence C9E88_RS00735 PF00149 Calcineurin-like phosphoesterase C9E88_RS00740 PF13091 PLD-like domain C9E88_RS00745 PF01553 Acyltransferase C9E88_RS00750 PF01926 50S ribosome-binding GTPase C9E88_RS00750 PF13167 GTP-binding GTPase N-terminal C9E88_RS00750 PF16360 GTP-binding GTPase Middle Region C9E88_RS00785 PF00149 Calcineurin-like phosphoesterase C9E88_RS00790 PF00398 Ribosomal RNA adenine dimethylase C9E88_RS00795 PF04166 Pyridoxal phosphate biosynthetic protein PdxA C9E88_RS00800 PF00572 Ribosomal protein L13 C9E88_RS00805 PF00380 Ribosomal protein S9/S16 C9E88_RS00820 PF00043 Glutathione S-transferase, C-terminal domain C9E88_RS00820 PF02798 Glutathione S-transferase, N-terminal domain C9E88_RS00825 PF04386 Stringent starvation protein B C9E88_RS00890 PF00990 Diguanylate cyclase, GGDEF domain C9E88_RS00890 PF00563 EAL domain C9E88_RS00890 PF08448 PAS fold C9E88_RS00890 PF08447 PAS fold C9E88_RS00895 PF13677 Membrane MotB of proton-channel complex MotA/MotB C9E88_RS00895 PF00691 OmpA family C9E88_RS00920 PF02445 Quinolinate synthetase A protein C9E88_RS00925 PF01960 ArgJ family C9E88_RS00935 PF02810 SEC-C motif C9E88_RS00935 PF07517 SecA DEAD-like domain C9E88_RS00935 PF01043 SecA preprotein cross-linking domain C9E88_RS00935 PF07516 SecA Wing and Scaffold domain C9E88_RS00940 PF00578 AhpC/TSA family C9E88_RS00940 PF10417 C-terminal domain of 1-Cys peroxiredoxin C9E88_RS00945 PF00753 Metallo-beta-lactamase superfamily C9E88_RS00960 PF02875 Mur ligase family, glutamate ligase domain C9E88_RS00960 PF08245 Mur ligase middle domain C9E88_RS00965 PF01039 Carboxyl transferase domain C9E88_RS00970 PF00290 Tryptophan synthase alpha chain C9E88_RS00980 PF12833 Helix-turn-helix domain C9E88_RS00980 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term C9E88_RS01010 PF00291 Pyridoxal-phosphate dependent enzyme C9E88_RS01015 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase C9E88_RS01020 PF00593 TonB dependent receptor C9E88_RS01020 PF07715 TonB-dependent Receptor Plug Domain C9E88_RS01025 PF00593 TonB dependent receptor C9E88_RS01025 PF07715 TonB-dependent Receptor Plug Domain C9E88_RS01030 PF01923 Cobalamin adenosyltransferase C9E88_RS01045 PF02696 Uncharacterized ACR, YdiU/UPF0061 family C9E88_RS01055 PF01757 Acyltransferase family C9E88_RS01060 PF00324 Amino acid permease C9E88_RS01065 PF00072 Response regulator receiver domain C9E88_RS01065 PF00486 Transcriptional regulatory protein, C terminal C9E88_RS01070 PF00672 HAMP domain C9E88_RS01070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9E88_RS01070 PF00512 His Kinase A (phospho-acceptor) domain C9E88_RS01080 PF02770 Acyl-CoA dehydrogenase, middle domain C9E88_RS01080 PF12806 Acetyl-CoA dehydrogenase C-terminal like C9E88_RS01080 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C9E88_RS01080 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C9E88_RS01085 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C9E88_RS01085 PF02770 Acyl-CoA dehydrogenase, middle domain C9E88_RS01085 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C9E88_RS01085 PF12806 Acetyl-CoA dehydrogenase C-terminal like C9E88_RS01105 PF06146 Phosphate-starvation-inducible E C9E88_RS01125 PF07715 TonB-dependent Receptor Plug Domain C9E88_RS01125 PF00593 TonB dependent receptor C9E88_RS01135 PF01336 OB-fold nucleic acid binding domain C9E88_RS01135 PF02938 GAD domain C9E88_RS01135 PF00152 tRNA synthetases class II (D, K and N) C9E88_RS01150 PF13439 Glycosyltransferase Family 4 C9E88_RS01150 PF00534 Glycosyl transferases group 1 C9E88_RS01155 PF13439 Glycosyltransferase Family 4 C9E88_RS01155 PF00534 Glycosyl transferases group 1 C9E88_RS01165 PF00534 Glycosyl transferases group 1 C9E88_RS01165 PF13439 Glycosyltransferase Family 4 C9E88_RS01170 PF00535 Glycosyl transferase family 2 C9E88_RS01175 PF01522 Polysaccharide deacetylase C9E88_RS01190 PF01063 Amino-transferase class IV C9E88_RS01195 PF08335 GlnD PII-uridylyltransferase C9E88_RS01195 PF03710 Glutamate-ammonia ligase adenylyltransferase C9E88_RS01205 PF03971 Monomeric isocitrate dehydrogenase C9E88_RS01220 PF02547 Queuosine biosynthesis protein C9E88_RS01230 PF04011 LemA family C9E88_RS01240 PF01702 Queuine tRNA-ribosyltransferase C9E88_RS01245 PF02699 Preprotein translocase subunit C9E88_RS01250 PF07549 SecD/SecF GG Motif C9E88_RS01250 PF02355 Protein export membrane protein C9E88_RS01250 PF13721 SecD export protein N-terminal TM region C9E88_RS01255 PF02355 Protein export membrane protein C9E88_RS01255 PF07549 SecD/SecF GG Motif C9E88_RS01265 PF13291 ACT domain C9E88_RS01265 PF02824 TGS domain C9E88_RS01265 PF04607 Region found in RelA / SpoT proteins C9E88_RS01270 PF05958 tRNA (Uracil-5-)-methyltransferase C9E88_RS01280 PF00291 Pyridoxal-phosphate dependent enzyme C9E88_RS01285 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C9E88_RS01285 PF00072 Response regulator receiver domain C9E88_RS01285 PF01627 Hpt domain C9E88_RS01285 PF00512 His Kinase A (phospho-acceptor) domain C9E88_RS01285 PF00672 HAMP domain C9E88_RS01285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9E88_RS01290 PF00378 Enoyl-CoA hydratase/isomerase C9E88_RS01295 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase C9E88_RS01295 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C9E88_RS01300 PF01261 Xylose isomerase-like TIM barrel C9E88_RS01315 PF02233 NAD(P) transhydrogenase beta subunit C9E88_RS01320 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch C9E88_RS01325 PF05222 Alanine dehydrogenase/PNT, N-terminal domain C9E88_RS01325 PF01262 Alanine dehydrogenase/PNT, C-terminal domain C9E88_RS01330 PF00892 EamA-like transporter family C9E88_RS01335 PF00376 MerR family regulatory protein C9E88_RS01335 PF09278 MerR, DNA binding C9E88_RS01345 PF07690 Major Facilitator Superfamily C9E88_RS01370 PF11867 Domain of unknown function (DUF3387) C9E88_RS01370 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) C9E88_RS01370 PF18766 SWI2/SNF2 ATPase C9E88_RS01385 PF01420 Type I restriction modification DNA specificity domain C9E88_RS01390 PF17191 RecG wedge domain C9E88_RS01390 PF13749 Putative ATP-dependent DNA helicase recG C-terminal C9E88_RS01390 PF00270 DEAD/DEAH box helicase C9E88_RS01395 PF02384 N-6 DNA Methylase C9E88_RS01415 PF00120 Glutamine synthetase, catalytic domain C9E88_RS01420 PF00486 Transcriptional regulatory protein, C terminal C9E88_RS01420 PF00072 Response regulator receiver domain C9E88_RS01425 PF00512 His Kinase A (phospho-acceptor) domain C9E88_RS01425 PF13493 Domain of unknown function (DUF4118) C9E88_RS01425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9E88_RS01425 PF13492 GAF domain C9E88_RS01425 PF02702 Osmosensitive K+ channel His kinase sensor domain C9E88_RS01430 PF02669 K+-transporting ATPase, c chain C9E88_RS01440 PF03814 Potassium-transporting ATPase A subunit C9E88_RS01445 PF02673 Bacitracin resistance protein BacA C9E88_RS01500 PF00589 Phage integrase family C9E88_RS01505 PF01207 Dihydrouridine synthase (Dus) C9E88_RS01510 PF02441 Flavoprotein C9E88_RS01510 PF04127 DNA / pantothenate metabolism flavoprotein C9E88_RS01515 PF04002 RadC-like JAB domain C9E88_RS01520 PF01062 Bestrophin, RFP-TM, chloride channel C9E88_RS01525 PF02811 PHP domain C9E88_RS01530 PF04279 Intracellular septation protein A C9E88_RS01535 PF03795 YCII-related domain C9E88_RS01545 PF05430 S-adenosyl-L-methionine-dependent methyltransferase C9E88_RS01545 PF01266 FAD dependent oxidoreductase C9E88_RS01555 PF04461 Protein of unknown function (DUF520) C9E88_RS01570 PF03061 Thioesterase superfamily C9E88_RS01575 PF00085 Thioredoxin C9E88_RS01585 PF00753 Metallo-beta-lactamase superfamily C9E88_RS01585 PF04273 Putative phosphatase (DUF442) C9E88_RS01600 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C9E88_RS01600 PF07992 Pyridine nucleotide-disulphide oxidoreductase C9E88_RS01600 PF00403 Heavy-metal-associated domain C9E88_RS01640 PF01066 CDP-alcohol phosphatidyltransferase C9E88_RS01645 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ C9E88_RS01670 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain C9E88_RS01670 PF00056 lactate/malate dehydrogenase, NAD binding domain C9E88_RS01680 PF10145 Phage-related minor tail protein C9E88_RS01680 PF01551 Peptidase family M23 C9E88_RS01680 PF01464 Transglycosylase SLT domain C9E88_RS01685 PF00919 Uncharacterized protein family UPF0004 C9E88_RS01685 PF04055 Radical SAM superfamily C9E88_RS01685 PF01938 TRAM domain C9E88_RS01690 PF02562 PhoH-like protein C9E88_RS01695 PF02130 Uncharacterized protein family UPF0054 C9E88_RS01730 PF09084 NMT1/THI5 like C9E88_RS01745 PF03358 NADPH-dependent FMN reductase C9E88_RS01750 PF03631 Virulence factor BrkB C9E88_RS01760 PF00892 EamA-like transporter family C9E88_RS01770 PF01557 Fumarylacetoacetate (FAA) hydrolase family C9E88_RS01805 PF00773 RNB domain C9E88_RS01805 PF08461 Ribonuclease R winged-helix domain C9E88_RS01805 PF17876 Cold shock domain C9E88_RS01805 PF00575 S1 RNA binding domain C9E88_RS01805 PF08206 Ribonuclease B OB domain C9E88_RS01820 PF01432 Peptidase family M3 C9E88_RS01825 PF09526 Probable metal-binding protein (DUF2387) C9E88_RS01835 PF00892 EamA-like transporter family C9E88_RS01860 PF03937 Flavinator of succinate dehydrogenase C9E88_RS01865 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C9E88_RS01865 PF02770 Acyl-CoA dehydrogenase, middle domain C9E88_RS01865 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C9E88_RS01875 PF00743 Flavin-binding monooxygenase-like C9E88_RS01880 PF01196 Ribosomal protein L17 C9E88_RS01885 PF01000 RNA polymerase Rpb3/RpoA insert domain C9E88_RS01885 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain C9E88_RS01885 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain C9E88_RS01890 PF01479 S4 domain C9E88_RS01890 PF00163 Ribosomal protein S4/S9 N-terminal domain C9E88_RS01895 PF00411 Ribosomal protein S11 C9E88_RS01900 PF00416 Ribosomal protein S13/S18 C9E88_RS01905 PF00444 Ribosomal protein L36 C9E88_RS01910 PF00344 SecY translocase C9E88_RS01915 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A C9E88_RS01920 PF00327 Ribosomal protein L30p/L7e C9E88_RS01925 PF03719 Ribosomal protein S5, C-terminal domain C9E88_RS01925 PF00333 Ribosomal protein S5, N-terminal domain C9E88_RS01930 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast C9E88_RS01935 PF00347 Ribosomal protein L6 C9E88_RS01940 PF00410 Ribosomal protein S8 C9E88_RS01945 PF00253 Ribosomal protein S14p/S29e C9E88_RS01950 PF00281 Ribosomal protein L5 C9E88_RS01950 PF00673 ribosomal L5P family C-terminus C9E88_RS01955 PF00467 KOW motif C9E88_RS01955 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 C9E88_RS01960 PF00238 Ribosomal protein L14p/L23e C9E88_RS01965 PF00366 Ribosomal protein S17 C9E88_RS01970 PF00831 Ribosomal L29 protein C9E88_RS01975 PF00252 Ribosomal protein L16p/L10e C9E88_RS01980 PF00189 Ribosomal protein S3, C-terminal domain C9E88_RS01980 PF07650 KH domain C9E88_RS01985 PF00237 Ribosomal protein L22p/L17e C9E88_RS01990 PF00203 Ribosomal protein S19 C9E88_RS01995 PF03947 Ribosomal Proteins L2, C-terminal domain C9E88_RS01995 PF00181 Ribosomal Proteins L2, RNA binding domain C9E88_RS02000 PF00276 Ribosomal protein L23 C9E88_RS02005 PF00573 Ribosomal protein L4/L1 family C9E88_RS02010 PF00297 Ribosomal protein L3 C9E88_RS02015 PF00338 Ribosomal protein S10p/S20e C9E88_RS02020 PF00117 Glutamine amidotransferase class-I C9E88_RS02025 PF01053 Cys/Met metabolism PLP-dependent enzyme C9E88_RS02030 PF05872 Bacterial protein of unknown function (DUF853) C9E88_RS02035 PF00042 Globin C9E88_RS02035 PF00970 Oxidoreductase FAD-binding domain C9E88_RS02035 PF00175 Oxidoreductase NAD-binding domain C9E88_RS02040 PF02082 Transcriptional regulator C9E88_RS02045 PF01926 50S ribosome-binding GTPase C9E88_RS02055 PF00375 Sodium:dicarboxylate symporter family C9E88_RS02065 PF01553 Acyltransferase C9E88_RS02080 PF17191 RecG wedge domain C9E88_RS02080 PF00271 Helicase conserved C-terminal domain C9E88_RS02080 PF00270 DEAD/DEAH box helicase C9E88_RS02085 PF00156 Phosphoribosyl transferase domain C9E88_RS02090 PF00293 NUDIX domain C9E88_RS02095 PF03641 Possible lysine decarboxylase C9E88_RS02100 PF01544 CorA-like Mg2+ transporter protein C9E88_RS02120 PF02405 Permease MlaE C9E88_RS02125 PF00005 ABC transporter C9E88_RS02130 PF00271 Helicase conserved C-terminal domain C9E88_RS02130 PF00270 DEAD/DEAH box helicase C9E88_RS02130 PF12343 Cold shock protein DEAD box A C9E88_RS02130 PF03880 DbpA RNA binding domain C9E88_RS02135 PF01202 Shikimate kinase C9E88_RS02140 PF00459 Inositol monophosphatase family C9E88_RS02145 PF13292 1-deoxy-D-xylulose-5-phosphate synthase C9E88_RS02145 PF02779 Transketolase, pyrimidine binding domain C9E88_RS02145 PF02780 Transketolase, C-terminal domain C9E88_RS02150 PF00925 GTP cyclohydrolase II C9E88_RS02160 PF06969 HemN C-terminal domain C9E88_RS02160 PF04055 Radical SAM superfamily C9E88_RS02165 PF01218 Coproporphyrinogen III oxidase C9E88_RS02175 PF01488 Shikimate / quinate 5-dehydrogenase C9E88_RS02175 PF18317 Shikimate 5'-dehydrogenase C-terminal domain C9E88_RS02175 PF08501 Shikimate dehydrogenase substrate binding domain C9E88_RS02180 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C9E88_RS02180 PF12806 Acetyl-CoA dehydrogenase C-terminal like C9E88_RS02180 PF02770 Acyl-CoA dehydrogenase, middle domain C9E88_RS02180 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C9E88_RS02185 PF04055 Radical SAM superfamily C9E88_RS02185 PF06969 HemN C-terminal domain C9E88_RS02195 PF01554 MatE C9E88_RS02205 PF03109 ABC1 family C9E88_RS02210 PF01197 Ribosomal protein L31 C9E88_RS02215 PF02537 CrcB-like protein, Camphor Resistance (CrcB) C9E88_RS02235 PF01209 ubiE/COQ5 methyltransferase family C9E88_RS02250 PF13614 AAA domain C9E88_RS02255 PF01594 AI-2E family transporter C9E88_RS02260 PF00080 Copper/zinc superoxide dismutase (SODC) C9E88_RS02270 PF12805 FUSC-like inner membrane protein yccS C9E88_RS02275 PF12823 Domain of unknown function (DUF3817) C9E88_RS02280 PF07690 Major Facilitator Superfamily C9E88_RS02285 PF02678 Pirin C9E88_RS02285 PF05726 Pirin C-terminal cupin domain C9E88_RS02300 PF01565 FAD binding domain C9E88_RS02300 PF02913 FAD linked oxidases, C-terminal domain C9E88_RS02305 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C9E88_RS02305 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C9E88_RS02310 PF00892 EamA-like transporter family C9E88_RS02320 PF00892 EamA-like transporter family C9E88_RS02330 PF01925 Sulfite exporter TauE/SafE C9E88_RS02335 PF01509 TruB family pseudouridylate synthase (N terminal domain) C9E88_RS02335 PF09157 Pseudouridine synthase II TruB, C-terminal C9E88_RS02335 PF16198 tRNA pseudouridylate synthase B C-terminal domain C9E88_RS02340 PF03280 Proteobacterial lipase chaperone protein C9E88_RS02345 PF00561 alpha/beta hydrolase fold C9E88_RS02350 PF00561 alpha/beta hydrolase fold C9E88_RS02355 PF00561 alpha/beta hydrolase fold C9E88_RS02360 PF00561 alpha/beta hydrolase fold C9E88_RS02365 PF01245 Ribosomal protein L19 C9E88_RS02370 PF01746 tRNA (Guanine-1)-methyltransferase C9E88_RS02375 PF05239 PRC-barrel domain C9E88_RS02375 PF01782 RimM N-terminal domain C9E88_RS02380 PF00886 Ribosomal protein S16 C9E88_RS02385 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor C9E88_RS02385 PF07963 Prokaryotic N-terminal methylation motif C9E88_RS02390 PF00114 Pilin (bacterial filament) C9E88_RS02390 PF07963 Prokaryotic N-terminal methylation motif C9E88_RS02415 PF07963 Prokaryotic N-terminal methylation motif C9E88_RS02415 PF00114 Pilin (bacterial filament) C9E88_RS02420 PF02401 LytB protein C9E88_RS02425 PF00625 Guanylate kinase C9E88_RS02430 PF01192 RNA polymerase Rpb6 C9E88_RS02435 PF13291 ACT domain C9E88_RS02435 PF04607 Region found in RelA / SpoT proteins C9E88_RS02435 PF02824 TGS domain C9E88_RS02440 PF01042 Endoribonuclease L-PSP C9E88_RS02445 PF04324 BFD-like [2Fe-2S] binding domain C9E88_RS02450 PF00210 Ferritin-like domain C9E88_RS02455 PF00114 Pilin (bacterial filament) C9E88_RS02455 PF07963 Prokaryotic N-terminal methylation motif C9E88_RS02460 PF00534 Glycosyl transferases group 1 C9E88_RS02460 PF13439 Glycosyltransferase Family 4 C9E88_RS02470 PF03275 UDP-galactopyranose mutase C9E88_RS02475 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase C9E88_RS02475 PF00535 Glycosyl transferase family 2 C9E88_RS02500 PF00005 ABC transporter C9E88_RS02500 PF00664 ABC transporter transmembrane region C9E88_RS02505 PF00535 Glycosyl transferase family 2 C9E88_RS02515 PF00114 Pilin (bacterial filament) C9E88_RS02515 PF07963 Prokaryotic N-terminal methylation motif C9E88_RS02525 PF04536 TPM domain C9E88_RS02530 PF04011 LemA family C9E88_RS02540 PF07992 Pyridine nucleotide-disulphide oxidoreductase C9E88_RS02540 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster C9E88_RS02545 PF01645 Conserved region in glutamate synthase C9E88_RS02545 PF00310 Glutamine amidotransferases class-II C9E88_RS02545 PF04898 Glutamate synthase central domain C9E88_RS02545 PF01493 GXGXG motif C9E88_RS02555 PF01761 3-dehydroquinate synthase C9E88_RS02560 PF01202 Shikimate kinase C9E88_RS02565 PF00263 Bacterial type II and III secretion system protein C9E88_RS02565 PF07660 Secretin and TonB N terminus short domain C9E88_RS02565 PF03958 Bacterial type II/III secretion system short domain C9E88_RS02565 PF11741 AMIN domain C9E88_RS02575 PF04350 Pilus assembly protein, PilO C9E88_RS02580 PF05137 Fimbrial assembly protein (PilN) C9E88_RS02585 PF11104 Type IV pilus assembly protein PilM; C9E88_RS02590 PF17092 Penicillin-binding protein OB-like domain C9E88_RS02590 PF00912 Transglycosylase C9E88_RS02590 PF00905 Penicillin binding protein transpeptidase domain C9E88_RS02595 PF13847 Methyltransferase domain C9E88_RS02600 PF00953 Glycosyl transferase family 4 C9E88_RS02605 PF08245 Mur ligase middle domain C9E88_RS02605 PF02875 Mur ligase family, glutamate ligase domain C9E88_RS02605 PF01225 Mur ligase family, catalytic domain C9E88_RS02610 PF08245 Mur ligase middle domain C9E88_RS02610 PF02875 Mur ligase family, glutamate ligase domain C9E88_RS02610 PF01225 Mur ligase family, catalytic domain C9E88_RS02615 PF03717 Penicillin-binding Protein dimerisation domain C9E88_RS02615 PF00905 Penicillin binding protein transpeptidase domain C9E88_RS02625 PF01795 MraW methylase family C9E88_RS02645 PF00749 tRNA synthetases class I (E and Q), catalytic domain C9E88_RS02660 PF01545 Cation efflux family C9E88_RS02665 PF12848 ABC transporter C9E88_RS02665 PF00005 ABC transporter C9E88_RS02670 PF01053 Cys/Met metabolism PLP-dependent enzyme C9E88_RS02675 PF00106 short chain dehydrogenase C9E88_RS02680 PF01502 Phosphoribosyl-AMP cyclohydrolase C9E88_RS02695 PF13244 Domain of unknown function (DUF4040) C9E88_RS02695 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter C9E88_RS02695 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus C9E88_RS02695 PF00361 Proton-conducting membrane transporter C9E88_RS02700 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L C9E88_RS02705 PF00361 Proton-conducting membrane transporter C9E88_RS02710 PF01899 Na+/H+ ion antiporter subunit C9E88_RS02715 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) C9E88_RS02720 PF03334 Na+/H+ antiporter subunit C9E88_RS02725 PF02033 Ribosome-binding factor A C9E88_RS02730 PF11987 Translation-initiation factor 2 C9E88_RS02730 PF08364 Bacterial translation initiation factor IF-2 associated region C9E88_RS02730 PF00009 Elongation factor Tu GTP binding domain C9E88_RS02730 PF04760 Translation initiation factor IF-2, N-terminal region C9E88_RS02735 PF13184 NusA-like KH domain C9E88_RS02735 PF08529 NusA N-terminal domain C9E88_RS02735 PF00575 S1 RNA binding domain C9E88_RS02740 PF02576 RimP N-terminal domain C9E88_RS02740 PF17384 RimP C-terminal SH3 domain C9E88_RS02765 PF03840 Preprotein translocase SecG subunit C9E88_RS02770 PF00121 Triosephosphate isomerase C9E88_RS02775 PF00437 Type II/IV secretion system protein C9E88_RS02775 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain C9E88_RS02780 PF00482 Type II secretion system (T2SS), protein F C9E88_RS02785 PF01478 Type IV leader peptidase family C9E88_RS02785 PF06750 Bacterial Peptidase A24 N-terminal domain C9E88_RS02790 PF01121 Dephospho-CoA kinase C9E88_RS02800 PF08032 RNA 2'-O ribose methyltransferase substrate binding C9E88_RS02800 PF00588 SpoU rRNA Methylase family C9E88_RS02805 PF06865 Pyrimidine/purine nucleoside phosphorylase C9E88_RS02810 PF02463 RecF/RecN/SMC N terminal domain C9E88_RS02815 PF02622 Uncharacterized ACR, COG1678 C9E88_RS02820 PF03652 Holliday junction resolvase C9E88_RS02825 PF13533 Biotin-lipoyl like C9E88_RS02835 PF04632 Fusaric acid resistance protein family C9E88_RS02850 PF01895 PhoU domain C9E88_RS02865 PF13667 ThiC-associated domain C9E88_RS02865 PF01964 Radical SAM ThiC family C9E88_RS02870 PF00293 NUDIX domain C9E88_RS02875 PF00149 Calcineurin-like phosphoesterase C9E88_RS02880 PF01258 Prokaryotic dksA/traR C4-type zinc finger C9E88_RS02885 PF00749 tRNA synthetases class I (E and Q), catalytic domain C9E88_RS02890 PF01098 Cell cycle protein C9E88_RS02895 PF02875 Mur ligase family, glutamate ligase domain C9E88_RS02895 PF08245 Mur ligase middle domain C9E88_RS02905 PF02421 Ferrous iron transport protein B C9E88_RS02905 PF07670 Nucleoside recognition C9E88_RS02905 PF07664 Ferrous iron transport protein B C terminus C9E88_RS02915 PF00589 Phage integrase family C9E88_RS02915 PF02899 Phage integrase, N-terminal SAM-like domain C9E88_RS02920 PF10411 Disulfide bond isomerase protein N-terminus C9E88_RS02920 PF13098 Thioredoxin-like domain C9E88_RS02925 PF03447 Homoserine dehydrogenase, NAD binding domain C9E88_RS02925 PF00742 Homoserine dehydrogenase C9E88_RS02925 PF01842 ACT domain C9E88_RS02930 PF00291 Pyridoxal-phosphate dependent enzyme C9E88_RS02935 PF00768 D-alanyl-D-alanine carboxypeptidase C9E88_RS02940 PF00196 Bacterial regulatory proteins, luxR family C9E88_RS02940 PF00072 Response regulator receiver domain C9E88_RS02945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9E88_RS02945 PF00512 His Kinase A (phospho-acceptor) domain C9E88_RS02950 PF00158 Sigma-54 interaction domain C9E88_RS02950 PF00072 Response regulator receiver domain C9E88_RS02950 PF02954 Bacterial regulatory protein, Fis family C9E88_RS02955 PF01471 Putative peptidoglycan binding domain C9E88_RS02955 PF03572 Peptidase family S41 C9E88_RS02955 PF17820 PDZ domain C9E88_RS02960 PF01676 Metalloenzyme superfamily C9E88_RS02960 PF06415 BPG-independent PGAM N-terminus (iPGM_N) C9E88_RS02965 PF03739 Lipopolysaccharide export system permease LptF/LptG C9E88_RS02970 PF03739 Lipopolysaccharide export system permease LptF/LptG C9E88_RS02975 PF02789 Cytosol aminopeptidase family, N-terminal domain C9E88_RS02975 PF00883 Cytosol aminopeptidase family, catalytic domain C9E88_RS02995 PF09335 SNARE associated Golgi protein C9E88_RS03000 PF00677 Lumazine binding domain C9E88_RS03010 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C9E88_RS03010 PF01872 RibD C-terminal domain C9E88_RS03015 PF03477 ATP cone domain C9E88_RS03020 PF00909 Ammonium Transporter Family C9E88_RS03025 PF00543 Nitrogen regulatory protein P-II C9E88_RS03035 PF01078 Magnesium chelatase, subunit ChlI C9E88_RS03035 PF13335 Magnesium chelatase, subunit ChlI C-terminal C9E88_RS03050 PF03573 outer membrane porin, OprD family C9E88_RS03055 PF00719 Inorganic pyrophosphatase C9E88_RS03070 PF13193 AMP-binding enzyme C-terminal domain C9E88_RS03070 PF00501 AMP-binding enzyme C9E88_RS03075 PF00521 DNA gyrase/topoisomerase IV, subunit A C9E88_RS03075 PF03989 DNA gyrase C-terminal domain, beta-propeller C9E88_RS03080 PF07690 Major Facilitator Superfamily C9E88_RS03085 PF03458 UPF0126 domain C9E88_RS03090 PF02810 SEC-C motif C9E88_RS03095 PF03471 Transporter associated domain C9E88_RS03095 PF03741 Integral membrane protein TerC family C9E88_RS03100 PF03641 Possible lysine decarboxylase C9E88_RS03110 PF07690 Major Facilitator Superfamily C9E88_RS03120 PF11799 impB/mucB/samB family C-terminal domain C9E88_RS03120 PF11798 IMS family HHH motif C9E88_RS03120 PF00817 impB/mucB/samB family C9E88_RS03135 PF08497 Radical SAM N-terminal C9E88_RS03135 PF11842 Domain of unknown function (DUF3362) C9E88_RS03135 PF04055 Radical SAM superfamily C9E88_RS03140 PF01435 Peptidase family M48 C9E88_RS03170 PF08359 YsiA-like protein, C-terminal region C9E88_RS03170 PF00440 Bacterial regulatory proteins, tetR family C9E88_RS03195 PF01327 Polypeptide deformylase C9E88_RS03205 PF02481 DNA recombination-mediator protein A C9E88_RS03205 PF17782 DprA winged helix domain C9E88_RS03210 PF01300 Telomere recombination C9E88_RS03225 PF00255 Glutathione peroxidase C9E88_RS03240 PF05726 Pirin C-terminal cupin domain C9E88_RS03240 PF02678 Pirin C9E88_RS03250 PF01263 Aldose 1-epimerase C9E88_RS03265 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain C9E88_RS03270 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C9E88_RS03270 PF02874 ATP synthase alpha/beta family, beta-barrel domain C9E88_RS03275 PF00231 ATP synthase C9E88_RS03280 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C9E88_RS03280 PF02874 ATP synthase alpha/beta family, beta-barrel domain C9E88_RS03280 PF00306 ATP synthase alpha/beta chain, C terminal domain C9E88_RS03285 PF00213 ATP synthase delta (OSCP) subunit C9E88_RS03290 PF00430 ATP synthase B/B' CF(0) C9E88_RS03295 PF00137 ATP synthase subunit C C9E88_RS03300 PF00119 ATP synthase A chain C9E88_RS03320 PF00005 ABC transporter C9E88_RS03325 PF00950 ABC 3 transport family C9E88_RS03330 PF05163 DinB family C9E88_RS03340 PF01810 LysE type translocator C9E88_RS03345 PF04261 Dyp-type peroxidase family C9E88_RS03380 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) C9E88_RS03380 PF13296 Putative type VI secretion system Rhs element Vgr C9E88_RS03380 PF04717 Type VI secretion system, phage-baseplate injector C9E88_RS03385 PF00155 Aminotransferase class I and II C9E88_RS03390 PF01554 MatE C9E88_RS03395 PF00296 Luciferase-like monooxygenase C9E88_RS03400 PF00005 ABC transporter C9E88_RS03405 PF00528 Binding-protein-dependent transport system inner membrane component C9E88_RS03410 PF00528 Binding-protein-dependent transport system inner membrane component C9E88_RS03435 PF02668 Taurine catabolism dioxygenase TauD, TfdA family C9E88_RS03440 PF00106 short chain dehydrogenase C9E88_RS03450 PF00486 Transcriptional regulatory protein, C terminal C9E88_RS03450 PF00072 Response regulator receiver domain C9E88_RS03455 PF00989 PAS fold C9E88_RS03455 PF00512 His Kinase A (phospho-acceptor) domain C9E88_RS03455 PF11808 Phosphate regulon sensor protein PhoR C9E88_RS03455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9E88_RS03470 PF05726 Pirin C-terminal cupin domain C9E88_RS03470 PF02678 Pirin C9E88_RS03475 PF08448 PAS fold C9E88_RS03475 PF00990 Diguanylate cyclase, GGDEF domain C9E88_RS03480 PF00145 C-5 cytosine-specific DNA methylase C9E88_RS03490 PF12102 Domain of unknown function (DUF3578) C9E88_RS03490 PF07728 AAA domain (dynein-related subfamily) C9E88_RS03495 PF00117 Glutamine amidotransferase class-I C9E88_RS03495 PF00958 GMP synthase C terminal domain C9E88_RS03495 PF02540 NAD synthase C9E88_RS03505 PF07681 DoxX C9E88_RS03510 PF09335 SNARE associated Golgi protein C9E88_RS03525 PF13614 AAA domain C9E88_RS03610 PF13737 Transposase DDE domain C9E88_RS03615 PF00465 Iron-containing alcohol dehydrogenase C9E88_RS03630 PF00171 Aldehyde dehydrogenase family C9E88_RS03635 PF01323 DSBA-like thioredoxin domain C9E88_RS03660 PF07804 HipA-like C-terminal domain C9E88_RS03660 PF13657 HipA N-terminal domain C9E88_RS03665 PF12419 SNF2 Helicase protein C9E88_RS03665 PF00176 SNF2 family N-terminal domain C9E88_RS03665 PF00271 Helicase conserved C-terminal domain C9E88_RS03680 PF02378 Phosphotransferase system, EIIC C9E88_RS03680 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C9E88_RS03685 PF00294 pfkB family carbohydrate kinase C9E88_RS03690 PF02896 PEP-utilising enzyme, TIM barrel domain C9E88_RS03690 PF00391 PEP-utilising enzyme, mobile domain C9E88_RS03690 PF05524 PEP-utilising enzyme, N-terminal C9E88_RS03690 PF00381 PTS HPr component phosphorylation site C9E88_RS03690 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C9E88_RS03700 PF06100 MCRA family C9E88_RS03725 PF00171 Aldehyde dehydrogenase family C9E88_RS03730 PF01323 DSBA-like thioredoxin domain C9E88_RS03740 PF00440 Bacterial regulatory proteins, tetR family C9E88_RS03745 PF00925 GTP cyclohydrolase II C9E88_RS03745 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase C9E88_RS03750 PF00885 6,7-dimethyl-8-ribityllumazine synthase C9E88_RS03755 PF01029 NusB family C9E88_RS03760 PF02769 AIR synthase related protein, C-terminal domain C9E88_RS03760 PF00586 AIR synthase related protein, N-terminal domain C9E88_RS03765 PF04608 Phosphatidylglycerophosphatase A C9E88_RS03770 PF12804 MobA-like NTP transferase domain C9E88_RS03770 PF00132 Bacterial transferase hexapeptide (six repeats) C9E88_RS03770 PF14602 Hexapeptide repeat of succinyl-transferase C9E88_RS03775 PF01380 SIS domain C9E88_RS03780 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C9E88_RS03780 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C9E88_RS03780 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C9E88_RS03780 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C9E88_RS03785 PF16363 GDP-mannose 4,6 dehydratase C9E88_RS03790 PF00342 Phosphoglucose isomerase C9E88_RS03795 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C9E88_RS03795 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C9E88_RS03795 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C9E88_RS03800 PF00483 Nucleotidyl transferase C9E88_RS03805 PF02397 Bacterial sugar transferase C9E88_RS03810 PF01050 Mannose-6-phosphate isomerase C9E88_RS03810 PF00483 Nucleotidyl transferase C9E88_RS03815 PF13579 Glycosyl transferase 4-like domain C9E88_RS03815 PF00534 Glycosyl transferases group 1 C9E88_RS03820 PF00132 Bacterial transferase hexapeptide (six repeats) C9E88_RS03825 PF13439 Glycosyltransferase Family 4 C9E88_RS03825 PF00534 Glycosyl transferases group 1 C9E88_RS03845 PF00293 NUDIX domain C9E88_RS03850 PF01370 NAD dependent epimerase/dehydratase family C9E88_RS03855 PF16363 GDP-mannose 4,6 dehydratase C9E88_RS03860 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C9E88_RS03860 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C9E88_RS03860 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C9E88_RS03865 PF02719 Polysaccharide biosynthesis protein C9E88_RS03870 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C9E88_RS03875 PF00132 Bacterial transferase hexapeptide (six repeats) C9E88_RS03875 PF14602 Hexapeptide repeat of succinyl-transferase C9E88_RS03875 PF17836 PglD N-terminal domain C9E88_RS03880 PF02397 Bacterial sugar transferase C9E88_RS03885 PF00534 Glycosyl transferases group 1 C9E88_RS03885 PF13477 Glycosyl transferase 4-like C9E88_RS03890 PF00534 Glycosyl transferases group 1 C9E88_RS03890 PF13439 Glycosyltransferase Family 4 C9E88_RS03895 PF00534 Glycosyl transferases group 1 C9E88_RS03895 PF13439 Glycosyltransferase Family 4 C9E88_RS03900 PF00132 Bacterial transferase hexapeptide (six repeats) C9E88_RS03905 PF00132 Bacterial transferase hexapeptide (six repeats) C9E88_RS03905 PF12464 Maltose acetyltransferase C9E88_RS03915 PF01370 NAD dependent epimerase/dehydratase family C9E88_RS03920 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C9E88_RS03920 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C9E88_RS03920 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C9E88_RS03925 PF02563 Polysaccharide biosynthesis/export protein C9E88_RS03925 PF18412 Outer-membrane lipoprotein Wza C-terminal domain C9E88_RS03925 PF10531 SLBB domain C9E88_RS03930 PF01451 Low molecular weight phosphotyrosine protein phosphatase C9E88_RS03935 PF13614 AAA domain C9E88_RS03935 PF13807 G-rich domain on putative tyrosine kinase C9E88_RS03935 PF02706 Chain length determinant protein C9E88_RS03940 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C9E88_RS03940 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C9E88_RS03945 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C9E88_RS03945 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C9E88_RS03960 PF10576 Iron-sulfur binding domain of endonuclease III C9E88_RS03960 PF00633 Helix-hairpin-helix motif C9E88_RS03960 PF00730 HhH-GPD superfamily base excision DNA repair protein C9E88_RS03960 PF14815 NUDIX domain C9E88_RS03965 PF01551 Peptidase family M23 C9E88_RS03975 PF03352 Methyladenine glycosylase C9E88_RS03980 PF00107 Zinc-binding dehydrogenase C9E88_RS03980 PF08240 Alcohol dehydrogenase GroES-like domain C9E88_RS04000 PF01113 Dihydrodipicolinate reductase, N-terminus C9E88_RS04000 PF05173 Dihydrodipicolinate reductase, C-terminus C9E88_RS04005 PF04932 O-Antigen ligase C9E88_RS04005 PF15864 Protein glycosylation ligase C9E88_RS04005 PF11846 Virulence factor membrane-bound polymerase, C-terminal C9E88_RS04010 PF00226 DnaJ domain C9E88_RS04010 PF00684 DnaJ central domain C9E88_RS04010 PF01556 DnaJ C terminal domain C9E88_RS04020 PF00873 AcrB/AcrD/AcrF family C9E88_RS04025 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C9E88_RS04030 PF16859 Tetracyclin repressor-like, C-terminal domain C9E88_RS04030 PF00440 Bacterial regulatory proteins, tetR family C9E88_RS04035 PF00311 Phosphoenolpyruvate carboxylase C9E88_RS04055 PF00563 EAL domain C9E88_RS04055 PF00990 Diguanylate cyclase, GGDEF domain C9E88_RS04055 PF03707 Bacterial signalling protein N terminal repeat C9E88_RS04070 PF00920 Dehydratase family C9E88_RS04080 PF05662 Coiled stalk of trimeric autotransporter adhesin C9E88_RS04080 PF05658 Head domain of trimeric autotransporter adhesin C9E88_RS04080 PF03895 YadA-like membrane anchor domain C9E88_RS04080 PF13018 Extended Signal Peptide of Type V secretion system C9E88_RS04100 PF02911 Formyl transferase, C-terminal domain C9E88_RS04100 PF00551 Formyl transferase C9E88_RS04105 PF01029 NusB family C9E88_RS04105 PF01189 16S rRNA methyltransferase RsmB/F C9E88_RS04110 PF00691 OmpA family C9E88_RS04150 PF13359 DDE superfamily endonuclease C9E88_RS04150 PF13613 Helix-turn-helix of DDE superfamily endonuclease C9E88_RS04160 PF00209 Sodium:neurotransmitter symporter family C9E88_RS04190 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C9E88_RS04200 PF07859 alpha/beta hydrolase fold C9E88_RS04215 PF01025 GrpE C9E88_RS04220 PF00012 Hsp70 protein C9E88_RS04235 PF01521 Iron-sulphur cluster biosynthesis C9E88_RS04255 PF00005 ABC transporter C9E88_RS04255 PF12848 ABC transporter C9E88_RS04265 PF00204 DNA gyrase B C9E88_RS04265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9E88_RS04265 PF18053 DNA gyrase B subunit insert domain C9E88_RS04265 PF00986 DNA gyrase B subunit, carboxyl terminus C9E88_RS04265 PF01751 Toprim domain C9E88_RS04270 PF02463 RecF/RecN/SMC N terminal domain C9E88_RS04275 PF00712 DNA polymerase III beta subunit, N-terminal domain C9E88_RS04275 PF02767 DNA polymerase III beta subunit, central domain C9E88_RS04275 PF02768 DNA polymerase III beta subunit, C-terminal domain C9E88_RS04280 PF08299 Bacterial dnaA protein helix-turn-helix C9E88_RS04280 PF00308 Bacterial dnaA protein C9E88_RS04280 PF11638 DnaA N-terminal domain C9E88_RS04285 PF00468 Ribosomal protein L34 C9E88_RS04290 PF00825 Ribonuclease P C9E88_RS04295 PF01809 Putative membrane protein insertion efficiency factor C9E88_RS04300 PF02096 60Kd inner membrane protein C9E88_RS04300 PF14849 YidC periplasmic domain C9E88_RS04305 PF10396 GTP-binding protein TrmE N-terminus C9E88_RS04305 PF01926 50S ribosome-binding GTPase C9E88_RS04305 PF12631 MnmE helical domain C9E88_RS04315 PF02583 Metal-sensitive transcriptional repressor C9E88_RS04330 PF00156 Phosphoribosyl transferase domain C9E88_RS04335 PF01979 Amidohydrolase family C9E88_RS04340 PF03741 Integral membrane protein TerC family C9E88_RS04345 PF07690 Major Facilitator Superfamily C9E88_RS04370 PF01225 Mur ligase family, catalytic domain C9E88_RS04370 PF02875 Mur ligase family, glutamate ligase domain C9E88_RS04370 PF08245 Mur ligase middle domain C9E88_RS04380 PF00731 AIR carboxylase C9E88_RS04385 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain C9E88_RS04385 PF02222 ATP-grasp domain C9E88_RS04390 PF13406 Transglycosylase SLT domain C9E88_RS04395 PF03702 Anhydro-N-acetylmuramic acid kinase C9E88_RS04400 PF00579 tRNA synthetases class I (W and Y) C9E88_RS04440 PF07690 Major Facilitator Superfamily C9E88_RS04445 PF07690 Major Facilitator Superfamily C9E88_RS04475 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C9E88_RS04480 PF01252 Signal peptidase (SPase) II C9E88_RS04485 PF06827 Zinc finger found in FPG and IleRS C9E88_RS04485 PF00133 tRNA synthetases class I (I, L, M and V) C9E88_RS04485 PF08264 Anticodon-binding domain of tRNA C9E88_RS04490 PF06574 FAD synthetase C9E88_RS04490 PF01687 Riboflavin kinase C9E88_RS04510 PF08362 YcdC-like protein, C-terminal region C9E88_RS04510 PF00440 Bacterial regulatory proteins, tetR family C9E88_RS04515 PF00005 ABC transporter C9E88_RS04520 PF00528 Binding-protein-dependent transport system inner membrane component C9E88_RS04525 PF00296 Luciferase-like monooxygenase C9E88_RS04530 PF09084 NMT1/THI5 like C9E88_RS04535 PF00583 Acetyltransferase (GNAT) family C9E88_RS04535 PF00696 Amino acid kinase family C9E88_RS04555 PF00106 short chain dehydrogenase C9E88_RS04560 PF13419 Haloacid dehalogenase-like hydrolase C9E88_RS04570 PF01323 DSBA-like thioredoxin domain C9E88_RS04575 PF00440 Bacterial regulatory proteins, tetR family C9E88_RS04580 PF01138 3' exoribonuclease family, domain 1 C9E88_RS04580 PF03725 3' exoribonuclease family, domain 2 C9E88_RS04585 PF04185 Phosphoesterase family C9E88_RS04585 PF05506 Domain of unknown function (DUF756) C9E88_RS04590 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain C9E88_RS04590 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain C9E88_RS04595 PF01510 N-acetylmuramoyl-L-alanine amidase C9E88_RS04600 PF03023 Lipid II flippase MurJ C9E88_RS04605 PF07043 Protein of unknown function (DUF1328) C9E88_RS04610 PF03692 Putative zinc- or iron-chelating domain C9E88_RS04620 PF00563 EAL domain C9E88_RS04620 PF00990 Diguanylate cyclase, GGDEF domain C9E88_RS04620 PF03707 Bacterial signalling protein N terminal repeat C9E88_RS04625 PF12002 MgsA AAA+ ATPase C terminal C9E88_RS04625 PF16193 AAA C-terminal domain C9E88_RS04625 PF00004 ATPase family associated with various cellular activities (AAA) C9E88_RS04630 PF01259 SAICAR synthetase C9E88_RS04640 PF00701 Dihydrodipicolinate synthetase family C9E88_RS04645 PF07690 Major Facilitator Superfamily C9E88_RS04655 PF00857 Isochorismatase family C9E88_RS04660 PF01758 Sodium Bile acid symporter family C9E88_RS04685 PF02580 D-Tyr-tRNA(Tyr) deacylase C9E88_RS04690 PF06628 Catalase-related immune-responsive C9E88_RS04690 PF00199 Catalase C9E88_RS04700 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain C9E88_RS04700 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family C9E88_RS04705 PF00581 Rhodanese-like domain C9E88_RS04710 PF02666 Phosphatidylserine decarboxylase C9E88_RS04720 PF00750 tRNA synthetases class I (R) C9E88_RS04720 PF03485 Arginyl tRNA synthetase N terminal domain C9E88_RS04720 PF05746 DALR anticodon binding domain C9E88_RS04730 PF04286 Protein of unknown function (DUF445) C9E88_RS04745 PF04262 Glutamate-cysteine ligase C9E88_RS04750 PF02600 Disulfide bond formation protein DsbB C9E88_RS04760 PF05728 Uncharacterised protein family (UPF0227) C9E88_RS04765 PF00204 DNA gyrase B C9E88_RS04765 PF00986 DNA gyrase B subunit, carboxyl terminus C9E88_RS04765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9E88_RS04765 PF01751 Toprim domain C9E88_RS04775 PF02653 Branched-chain amino acid transport system / permease component C9E88_RS04785 PF12399 Branched-chain amino acid ATP-binding cassette transporter C9E88_RS04785 PF00005 ABC transporter C9E88_RS04790 PF00005 ABC transporter C9E88_RS04800 PF00583 Acetyltransferase (GNAT) family C9E88_RS04825 PF02683 Cytochrome C biogenesis protein transmembrane region C9E88_RS04825 PF11412 Disulphide bond corrector protein DsbC C9E88_RS04835 PF00990 Diguanylate cyclase, GGDEF domain C9E88_RS04840 PF02525 Flavodoxin-like fold C9E88_RS04845 PF07859 alpha/beta hydrolase fold C9E88_RS04860 PF03372 Endonuclease/Exonuclease/phosphatase family C9E88_RS04865 PF00156 Phosphoribosyl transferase domain C9E88_RS04875 PF00313 'Cold-shock' DNA-binding domain C9E88_RS04880 PF02951 Prokaryotic glutathione synthetase, N-terminal domain C9E88_RS04880 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain C9E88_RS04885 PF04101 Glycosyltransferase family 28 C-terminal domain C9E88_RS04885 PF03033 Glycosyltransferase family 28 N-terminal domain C9E88_RS04890 PF01225 Mur ligase family, catalytic domain C9E88_RS04890 PF02875 Mur ligase family, glutamate ligase domain C9E88_RS04890 PF08245 Mur ligase middle domain C9E88_RS04895 PF01820 D-ala D-ala ligase N-terminus C9E88_RS04895 PF07478 D-ala D-ala ligase C-terminus C9E88_RS04900 PF08478 POTRA domain, FtsQ-type C9E88_RS04900 PF03799 Cell division protein FtsQ C9E88_RS04905 PF02491 SHS2 domain inserted in FTSA C9E88_RS04910 PF00091 Tubulin/FtsZ family, GTPase domain C9E88_RS04910 PF12327 FtsZ family, C-terminal domain C9E88_RS04915 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase C9E88_RS04930 PF00456 Transketolase, thiamine diphosphate binding domain C9E88_RS04930 PF17831 Pyruvate dehydrogenase E1 component middle domain C9E88_RS04935 PF02817 e3 binding domain C9E88_RS04935 PF00364 Biotin-requiring enzyme C9E88_RS04935 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C9E88_RS04940 PF01169 Uncharacterized protein family UPF0016 C9E88_RS04950 PF03692 Putative zinc- or iron-chelating domain C9E88_RS04955 PF00478 IMP dehydrogenase / GMP reductase domain C9E88_RS04955 PF00571 CBS domain C9E88_RS04960 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C9E88_RS04960 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C9E88_RS04960 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C9E88_RS04960 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C9E88_RS04965 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region C9E88_RS04965 PF01243 Pyridoxamine 5'-phosphate oxidase C9E88_RS04970 PF01368 DHH family C9E88_RS04970 PF02272 DHHA1 domain C9E88_RS04970 PF17768 RecJ OB domain C9E88_RS04995 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C9E88_RS05000 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) C9E88_RS05005 PF04452 RNA methyltransferase C9E88_RS05010 PF00924 Mechanosensitive ion channel C9E88_RS05020 PF16177 Acetyl-coenzyme A synthetase N-terminus C9E88_RS05020 PF13193 AMP-binding enzyme C-terminal domain C9E88_RS05020 PF00501 AMP-binding enzyme C9E88_RS05025 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C9E88_RS05025 PF08028 Acyl-CoA dehydrogenase, C-terminal domain C9E88_RS05030 PF00677 Lumazine binding domain C9E88_RS05040 PF00296 Luciferase-like monooxygenase C9E88_RS05045 PF03358 NADPH-dependent FMN reductase C9E88_RS05050 PF00196 Bacterial regulatory proteins, luxR family C9E88_RS05050 PF00072 Response regulator receiver domain C9E88_RS05060 PF00512 His Kinase A (phospho-acceptor) domain C9E88_RS05060 PF09456 RcsC Alpha-Beta-Loop (ABL) C9E88_RS05060 PF00072 Response regulator receiver domain C9E88_RS05060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9E88_RS05065 PF04341 Protein of unknown function, DUF485 C9E88_RS05070 PF00474 Sodium:solute symporter family C9E88_RS05090 PF00072 Response regulator receiver domain C9E88_RS05090 PF00990 Diguanylate cyclase, GGDEF domain C9E88_RS05100 PF17760 UvrA interaction domain C9E88_RS05100 PF17755 UvrA DNA-binding domain C9E88_RS05115 PF06942 GlpM protein C9E88_RS05120 PF03070 TENA/THI-4/PQQC family C9E88_RS05130 PF07690 Major Facilitator Superfamily C9E88_RS05135 PF00436 Single-strand binding protein family C9E88_RS05145 PF17754 MftR C-terminal domain C9E88_RS05145 PF00440 Bacterial regulatory proteins, tetR family C9E88_RS05150 PF10417 C-terminal domain of 1-Cys peroxiredoxin C9E88_RS05150 PF00578 AhpC/TSA family C9E88_RS05160 PF00857 Isochorismatase family C9E88_RS05165 PF05726 Pirin C-terminal cupin domain C9E88_RS05165 PF02678 Pirin C9E88_RS05170 PF01593 Flavin containing amine oxidoreductase C9E88_RS05195 PF02705 K+ potassium transporter C9E88_RS05220 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term C9E88_RS05220 PF12833 Helix-turn-helix domain C9E88_RS05235 PF00977 Histidine biosynthesis protein C9E88_RS05240 PF01636 Phosphotransferase enzyme family C9E88_RS05260 PF00324 Amino acid permease C9E88_RS05265 PF01266 FAD dependent oxidoreductase C9E88_RS05270 PF00892 EamA-like transporter family C9E88_RS05275 PF00977 Histidine biosynthesis protein C9E88_RS05290 PF00117 Glutamine amidotransferase class-I C9E88_RS05295 PF00475 Imidazoleglycerol-phosphate dehydratase C9E88_RS05355 PF02803 Thiolase, C-terminal domain C9E88_RS05355 PF00108 Thiolase, N-terminal domain C9E88_RS05360 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C9E88_RS05360 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C9E88_RS05360 PF00378 Enoyl-CoA hydratase/isomerase C9E88_RS05370 PF10431 C-terminal, D2-small domain, of ClpB protein C9E88_RS05370 PF07724 AAA domain (Cdc48 subfamily) C9E88_RS05380 PF08459 UvrC Helix-hairpin-helix N-terminal C9E88_RS05380 PF02151 UvrB/uvrC motif C9E88_RS05380 PF01541 GIY-YIG catalytic domain C9E88_RS05390 PF01066 CDP-alcohol phosphatidyltransferase C9E88_RS05395 PF04362 Bacterial Fe(2+) trafficking C9E88_RS05400 PF14698 Argininosuccinate lyase C-terminal C9E88_RS05400 PF00206 Lyase C9E88_RS05405 PF07694 5TMR of 5TMR-LYT C9E88_RS05405 PF06580 Histidine kinase C9E88_RS05405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9E88_RS05410 PF04397 LytTr DNA-binding domain C9E88_RS05410 PF00072 Response regulator receiver domain C9E88_RS05415 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain C9E88_RS05415 PF03900 Porphobilinogen deaminase, C-terminal domain C9E88_RS05440 PF00816 H-NS histone family C9E88_RS05455 PF03958 Bacterial type II/III secretion system short domain C9E88_RS05455 PF00263 Bacterial type II and III secretion system protein C9E88_RS05460 PF16697 Inner membrane component of T3SS, cytoplasmic domain C9E88_RS05465 PF13419 Haloacid dehalogenase-like hydrolase C9E88_RS05470 PF04715 Anthranilate synthase component I, N terminal region C9E88_RS05470 PF00425 chorismate binding enzyme C9E88_RS05495 PF03143 Elongation factor Tu C-terminal domain C9E88_RS05495 PF00009 Elongation factor Tu GTP binding domain C9E88_RS05495 PF03144 Elongation factor Tu domain 2 C9E88_RS05505 PF00584 SecE/Sec61-gamma subunits of protein translocation complex C9E88_RS05510 PF00467 KOW motif C9E88_RS05510 PF02357 Transcription termination factor nusG C9E88_RS05515 PF03946 Ribosomal protein L11, N-terminal domain C9E88_RS05515 PF00298 Ribosomal protein L11, RNA binding domain C9E88_RS05520 PF00687 Ribosomal protein L1p/L10e family C9E88_RS05525 PF00466 Ribosomal protein L10 C9E88_RS05530 PF16320 Ribosomal protein L7/L12 dimerisation domain C9E88_RS05530 PF00542 Ribosomal protein L7/L12 C-terminal domain C9E88_RS05535 PF04563 RNA polymerase beta subunit C9E88_RS05535 PF04561 RNA polymerase Rpb2, domain 2 C9E88_RS05535 PF04565 RNA polymerase Rpb2, domain 3 C9E88_RS05535 PF00562 RNA polymerase Rpb2, domain 6 C9E88_RS05535 PF04560 RNA polymerase Rpb2, domain 7 C9E88_RS05535 PF10385 RNA polymerase beta subunit external 1 domain C9E88_RS05540 PF05000 RNA polymerase Rpb1, domain 4 C9E88_RS05540 PF04997 RNA polymerase Rpb1, domain 1 C9E88_RS05540 PF04998 RNA polymerase Rpb1, domain 5 C9E88_RS05540 PF00623 RNA polymerase Rpb1, domain 2 C9E88_RS05540 PF04983 RNA polymerase Rpb1, domain 3 C9E88_RS05560 PF00561 alpha/beta hydrolase fold C9E88_RS05565 PF03553 Na+/H+ antiporter family C9E88_RS05565 PF13726 Na+-H+ antiporter family C9E88_RS05570 PF03922 OmpW family C9E88_RS05580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9E88_RS05580 PF00183 Hsp90 protein C9E88_RS05605 PF01323 DSBA-like thioredoxin domain C9E88_RS05615 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain C9E88_RS05615 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain C9E88_RS05620 PF00512 His Kinase A (phospho-acceptor) domain C9E88_RS05620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9E88_RS05620 PF00672 HAMP domain C9E88_RS05625 PF00486 Transcriptional regulatory protein, C terminal C9E88_RS05625 PF00072 Response regulator receiver domain C9E88_RS05630 PF17674 HHH domain C9E88_RS05630 PF00575 S1 RNA binding domain C9E88_RS05630 PF09371 Tex-like protein N-terminal domain C9E88_RS05630 PF16921 Tex protein YqgF-like domain C9E88_RS05655 PF03109 ABC1 family C9E88_RS05665 PF01209 ubiE/COQ5 methyltransferase family C9E88_RS05675 PF03976 Polyphosphate kinase 2 (PPK2) C9E88_RS05685 PF17946 RecC C-terminal domain C9E88_RS05690 PF13361 UvrD-like helicase C-terminal domain C9E88_RS05690 PF00580 UvrD/REP helicase N-terminal domain C9E88_RS05690 PF12705 PD-(D/E)XK nuclease superfamily C9E88_RS05695 PF13538 UvrD-like helicase C-terminal domain C9E88_RS05700 PF00312 Ribosomal protein S15 C9E88_RS05705 PF01138 3' exoribonuclease family, domain 1 C9E88_RS05705 PF00575 S1 RNA binding domain C9E88_RS05705 PF03725 3' exoribonuclease family, domain 2 C9E88_RS05705 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain C9E88_RS05705 PF00013 KH domain C9E88_RS05710 PF01544 CorA-like Mg2+ transporter protein C9E88_RS05720 PF04325 Protein of unknown function (DUF465) C9E88_RS05730 PF00226 DnaJ domain C9E88_RS05730 PF01556 DnaJ C terminal domain C9E88_RS05750 PF01430 Hsp33 protein C9E88_RS05755 PF00999 Sodium/hydrogen exchanger family C9E88_RS05755 PF02254 TrkA-N domain C9E88_RS05760 PF00270 DEAD/DEAH box helicase C9E88_RS05760 PF18319 PriA DNA helicase Cys-rich region (CRR) domain C9E88_RS05760 PF00271 Helicase conserved C-terminal domain C9E88_RS05760 PF18074 Primosomal protein N C-terminal domain C9E88_RS05760 PF17764 3′ DNA-binding domain (3′BD) C9E88_RS05765 PF00482 Type II secretion system (T2SS), protein F C9E88_RS05770 PF08334 Type II secretion system (T2SS), protein G C9E88_RS05770 PF07963 Prokaryotic N-terminal methylation motif C9E88_RS05775 PF13737 Transposase DDE domain C9E88_RS05785 PF09334 tRNA synthetases class I (M) C9E88_RS05785 PF01588 Putative tRNA binding domain C9E88_RS05785 PF08264 Anticodon-binding domain of tRNA C9E88_RS05790 PF00795 Carbon-nitrogen hydrolase C9E88_RS05795 PF03471 Transporter associated domain C9E88_RS05795 PF00571 CBS domain C9E88_RS05800 PF01206 Sulfurtransferase TusA C9E88_RS05805 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) C9E88_RS05805 PF04717 Type VI secretion system, phage-baseplate injector C9E88_RS05805 PF13296 Putative type VI secretion system Rhs element Vgr C9E88_RS05830 PF01177 Asp/Glu/Hydantoin racemase C9E88_RS05840 PF00762 Ferrochelatase C9E88_RS05845 PF00753 Metallo-beta-lactamase superfamily C9E88_RS05855 PF03884 DNA gyrase inhibitor YacG C9E88_RS05865 PF07992 Pyridine nucleotide-disulphide oxidoreductase C9E88_RS05865 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster C9E88_RS05890 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C9E88_RS05890 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C9E88_RS05925 PF05746 DALR anticodon binding domain C9E88_RS05925 PF02092 Glycyl-tRNA synthetase beta subunit C9E88_RS05930 PF02091 Glycyl-tRNA synthetase alpha subunit C9E88_RS05950 PF12627 Probable RNA and SrmB- binding site of polymerase A C9E88_RS05950 PF01368 DHH family C9E88_RS05950 PF01743 Poly A polymerase head domain C9E88_RS05950 PF02272 DHHA1 domain C9E88_RS05950 PF00571 CBS domain C9E88_RS05955 PF04024 PspC domain C9E88_RS05985 PF13193 AMP-binding enzyme C-terminal domain C9E88_RS05985 PF00501 AMP-binding enzyme C9E88_RS05990 PF12111 Polyribonucleotide phosphorylase C terminal C9E88_RS05990 PF10150 Ribonuclease E/G family C9E88_RS05990 PF00575 S1 RNA binding domain C9E88_RS06000 PF01479 S4 domain C9E88_RS06000 PF00849 RNA pseudouridylate synthase C9E88_RS06010 PF01557 Fumarylacetoacetate (FAA) hydrolase family C9E88_RS06015 PF01118 Semialdehyde dehydrogenase, NAD binding domain C9E88_RS06015 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation C9E88_RS06020 PF07836 DmpG-like communication domain C9E88_RS06020 PF00682 HMGL-like C9E88_RS06025 PF03573 outer membrane porin, OprD family C9E88_RS06030 PF00561 alpha/beta hydrolase fold C9E88_RS06035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9E88_RS06035 PF03466 LysR substrate binding domain C9E88_RS06040 PF00848 Ring hydroxylating alpha subunit (catalytic domain) C9E88_RS06040 PF00355 Rieske [2Fe-2S] domain C9E88_RS06045 PF00866 Ring hydroxylating beta subunit C9E88_RS06050 PF00355 Rieske [2Fe-2S] domain C9E88_RS06055 PF00106 short chain dehydrogenase C9E88_RS06060 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase C9E88_RS06065 PF14759 Reductase C-terminal C9E88_RS06065 PF07992 Pyridine nucleotide-disulphide oxidoreductase C9E88_RS06080 PF12706 Beta-lactamase superfamily domain C9E88_RS06095 PF00141 Peroxidase C9E88_RS06110 PF02770 Acyl-CoA dehydrogenase, middle domain C9E88_RS06110 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C9E88_RS06110 PF18158 Adaptive response protein AidB N-terminal domain C9E88_RS06115 PF01037 Lrp/AsnC ligand binding domain C9E88_RS06130 PF12833 Helix-turn-helix domain C9E88_RS06130 PF01965 DJ-1/PfpI family C9E88_RS06140 PF05524 PEP-utilising enzyme, N-terminal C9E88_RS06140 PF00391 PEP-utilising enzyme, mobile domain C9E88_RS06140 PF02896 PEP-utilising enzyme, TIM barrel domain C9E88_RS06140 PF01590 GAF domain C9E88_RS06145 PF00293 NUDIX domain C9E88_RS06170 PF03466 LysR substrate binding domain C9E88_RS06170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9E88_RS06180 PF00330 Aconitase family (aconitate hydratase) C9E88_RS06185 PF00694 Aconitase C-terminal domain C9E88_RS06195 PF00180 Isocitrate/isopropylmalate dehydrogenase C9E88_RS06210 PF01176 Translation initiation factor 1A / IF-1 C9E88_RS06220 PF01416 tRNA pseudouridine synthase C9E88_RS06240 PF02774 Semialdehyde dehydrogenase, dimerisation domain C9E88_RS06240 PF01118 Semialdehyde dehydrogenase, NAD binding domain C9E88_RS06260 PF03279 Bacterial lipid A biosynthesis acyltransferase C9E88_RS06275 PF12848 ABC transporter C9E88_RS06275 PF16326 ABC transporter C-terminal domain C9E88_RS06275 PF00005 ABC transporter C9E88_RS06280 PF04102 SlyX C9E88_RS06295 PF01751 Toprim domain C9E88_RS06295 PF01131 DNA topoisomerase C9E88_RS06295 PF08272 Topoisomerase I zinc-ribbon-like C9E88_RS06295 PF01396 Topoisomerase DNA binding C4 zinc finger C9E88_RS06320 PF02595 Glycerate kinase family C9E88_RS06325 PF13737 Transposase DDE domain C9E88_RS06335 PF00580 UvrD/REP helicase N-terminal domain C9E88_RS06335 PF13361 UvrD-like helicase C-terminal domain C9E88_RS06340 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) C9E88_RS06365 PF02254 TrkA-N domain C9E88_RS06365 PF00999 Sodium/hydrogen exchanger family C9E88_RS06370 PF00471 Ribosomal protein L33 C9E88_RS06375 PF00830 Ribosomal L28 family C9E88_RS06380 PF00171 Aldehyde dehydrogenase family C9E88_RS06390 PF00551 Formyl transferase C9E88_RS06390 PF01842 ACT domain C9E88_RS06400 PF01618 MotA/TolQ/ExbB proton channel family C9E88_RS06410 PF01625 Peptide methionine sulfoxide reductase C9E88_RS06425 PF00186 Dihydrofolate reductase C9E88_RS06430 PF00303 Thymidylate synthase C9E88_RS06455 PF01790 Prolipoprotein diacylglyceryl transferase C9E88_RS06470 PF00902 Sec-independent protein translocase protein (TatC) C9E88_RS06475 PF02416 mttA/Hcf106 family C9E88_RS06480 PF02416 mttA/Hcf106 family C9E88_RS06490 PF01725 Ham1 family C9E88_RS06505 PF00561 alpha/beta hydrolase fold C9E88_RS06505 PF07021 Methionine biosynthesis protein MetW C9E88_RS06510 PF00561 alpha/beta hydrolase fold C9E88_RS06515 PF08502 LeuA allosteric (dimerisation) domain C9E88_RS06515 PF00682 HMGL-like C9E88_RS06520 PF01070 FMN-dependent dehydrogenase C9E88_RS06525 PF18331 PKHD-type hydroxylase C-terminal domain C9E88_RS06525 PF13640 2OG-Fe(II) oxygenase superfamily C9E88_RS06530 PF00593 TonB dependent receptor C9E88_RS06530 PF07715 TonB-dependent Receptor Plug Domain C9E88_RS06535 PF07715 TonB-dependent Receptor Plug Domain C9E88_RS06535 PF00593 TonB dependent receptor C9E88_RS06540 PF07715 TonB-dependent Receptor Plug Domain C9E88_RS06540 PF00593 TonB dependent receptor C9E88_RS06545 PF05697 Bacterial trigger factor protein (TF) C9E88_RS06545 PF05698 Bacterial trigger factor protein (TF) C-terminus C9E88_RS06545 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C9E88_RS06550 PF00574 Clp protease C9E88_RS06555 PF06689 ClpX C4-type zinc finger C9E88_RS06555 PF07724 AAA domain (Cdc48 subfamily) C9E88_RS06555 PF10431 C-terminal, D2-small domain, of ClpB protein C9E88_RS06570 PF05681 Fumarate hydratase (Fumerase) C9E88_RS06570 PF05683 Fumarase C-terminus C9E88_RS06595 PF01515 Phosphate acetyl/butaryl transferase C9E88_RS06595 PF07085 DRTGG domain C9E88_RS06600 PF00871 Acetokinase family C9E88_RS06605 PF00171 Aldehyde dehydrogenase family C9E88_RS06620 PF00933 Glycosyl hydrolase family 3 N terminal domain C9E88_RS06625 PF17804 Tail specific protease N-terminal domain C9E88_RS06625 PF00595 PDZ domain C9E88_RS06625 PF03572 Peptidase family S41 C9E88_RS06625 PF11818 C-terminal domain of tail specific protease (DUF3340) C9E88_RS06630 PF03707 Bacterial signalling protein N terminal repeat C9E88_RS06630 PF00563 EAL domain C9E88_RS06630 PF00990 Diguanylate cyclase, GGDEF domain C9E88_RS06635 PF01425 Amidase C9E88_RS06640 PF02785 Biotin carboxylase C-terminal domain C9E88_RS06640 PF00289 Biotin carboxylase, N-terminal domain C9E88_RS06640 PF00364 Biotin-requiring enzyme C9E88_RS06640 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C9E88_RS06645 PF07729 FCD domain C9E88_RS06645 PF00392 Bacterial regulatory proteins, gntR family C9E88_RS06650 PF16658 Class II release factor RF3, C-terminal domain C9E88_RS06650 PF03144 Elongation factor Tu domain 2 C9E88_RS06650 PF00009 Elongation factor Tu GTP binding domain C9E88_RS06665 PF01026 TatD related DNase C9E88_RS06675 PF02556 Preprotein translocase subunit SecB C9E88_RS06680 PF00462 Glutaredoxin C9E88_RS06690 PF03193 RsgA GTPase C9E88_RS06695 PF00929 Exonuclease C9E88_RS06705 PF00899 ThiF family C9E88_RS06710 PF04717 Type VI secretion system, phage-baseplate injector C9E88_RS06710 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) C9E88_RS06710 PF04717 Type VI secretion system, phage-baseplate injector C9E88_RS06710 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) C9E88_RS06710 PF13296 Putative type VI secretion system Rhs element Vgr C9E88_RS06710 PF13296 Putative type VI secretion system Rhs element Vgr C9E88_RS06740 PF02321 Outer membrane efflux protein C9E88_RS06740 PF08139 Prokaryotic membrane lipoprotein lipid attachment site C9E88_RS06745 PF00005 ABC transporter C9E88_RS06745 PF12704 MacB-like periplasmic core domain C9E88_RS06745 PF02687 FtsX-like permease family C9E88_RS06750 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C9E88_RS06765 PF09334 tRNA synthetases class I (M) C9E88_RS06765 PF13603 Leucyl-tRNA synthetase, Domain 2 C9E88_RS06765 PF00133 tRNA synthetases class I (I, L, M and V) C9E88_RS06765 PF08264 Anticodon-binding domain of tRNA C9E88_RS06775 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C9E88_RS06775 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C9E88_RS06775 PF00205 Thiamine pyrophosphate enzyme, central domain C9E88_RS06780 PF10369 Small subunit of acetolactate synthase C9E88_RS06785 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain C9E88_RS06785 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain C9E88_RS06810 PF07730 Histidine kinase C9E88_RS06810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9E88_RS06810 PF13492 GAF domain C9E88_RS06815 PF13439 Glycosyltransferase Family 4 C9E88_RS06815 PF00534 Glycosyl transferases group 1 C9E88_RS06820 PF01569 PAP2 superfamily C9E88_RS06825 PF04384 Iron-sulphur cluster assembly C9E88_RS06830 PF00334 Nucleoside diphosphate kinase C9E88_RS06835 PF04055 Radical SAM superfamily C9E88_RS06845 PF13464 Domain of unknown function (DUF4115) C9E88_RS06850 PF04551 GcpE protein C9E88_RS06855 PF13393 Histidyl-tRNA synthetase C9E88_RS06855 PF03129 Anticodon binding domain C9E88_RS06865 PF13360 PQQ-like domain C9E88_RS06870 PF01926 50S ribosome-binding GTPase C9E88_RS06870 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal C9E88_RS06880 PF00106 short chain dehydrogenase C9E88_RS06885 PF03819 MazG nucleotide pyrophosphohydrolase domain C9E88_RS06890 PF10531 SLBB domain C9E88_RS06895 PF12626 Polymerase A arginine-rich C-terminus C9E88_RS06895 PF12627 Probable RNA and SrmB- binding site of polymerase A C9E88_RS06895 PF01743 Poly A polymerase head domain C9E88_RS06900 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) C9E88_RS06905 PF02548 Ketopantoate hydroxymethyltransferase C9E88_RS06910 PF02569 Pantoate-beta-alanine ligase C9E88_RS06915 PF03668 P-loop ATPase protein family C9E88_RS06920 PF00381 PTS HPr component phosphorylation site C9E88_RS06925 PF04751 Protein of unknown function (DUF615) C9E88_RS06930 PF00501 AMP-binding enzyme C9E88_RS06930 PF13193 AMP-binding enzyme C-terminal domain C9E88_RS06935 PF04030 D-arabinono-1,4-lactone oxidase C9E88_RS06935 PF01565 FAD binding domain C9E88_RS06960 PF03129 Anticodon binding domain C9E88_RS06960 PF02824 TGS domain C9E88_RS06960 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C9E88_RS06960 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C9E88_RS06965 PF00707 Translation initiation factor IF-3, C-terminal domain C9E88_RS06965 PF05198 Translation initiation factor IF-3, N-terminal domain C9E88_RS06970 PF00043 Glutathione S-transferase, C-terminal domain C9E88_RS06970 PF02798 Glutathione S-transferase, N-terminal domain C9E88_RS06980 PF09335 SNARE associated Golgi protein C9E88_RS06990 PF07690 Major Facilitator Superfamily C9E88_RS06995 PF01632 Ribosomal protein L35 C9E88_RS07000 PF00453 Ribosomal protein L20 C9E88_RS07035 PF01409 tRNA synthetases class II core domain (F) C9E88_RS07035 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain C9E88_RS07040 PF03483 B3/4 domain C9E88_RS07040 PF03484 tRNA synthetase B5 domain C9E88_RS07040 PF03147 Ferredoxin-fold anticodon binding domain C9E88_RS07040 PF01588 Putative tRNA binding domain C9E88_RS07040 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain C9E88_RS07045 PF00216 Bacterial DNA-binding protein C9E88_RS07055 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C9E88_RS07055 PF07497 Rho termination factor, RNA-binding domain C9E88_RS07055 PF07498 Rho termination factor, N-terminal domain C9E88_RS07060 PF00085 Thioredoxin C9E88_RS07065 PF02541 Ppx/GppA phosphatase family C9E88_RS07070 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit C9E88_RS07075 PF11734 TilS substrate C-terminal domain C9E88_RS07075 PF09179 TilS substrate binding domain C9E88_RS07075 PF01171 PP-loop family C9E88_RS07080 PF14748 Pyrroline-5-carboxylate reductase dimerisation C9E88_RS07080 PF03807 NADP oxidoreductase coenzyme F420-dependent C9E88_RS07085 PF02325 YGGT family C9E88_RS07090 PF00476 DNA polymerase family A C9E88_RS07090 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain C9E88_RS07090 PF01367 5'-3' exonuclease, C-terminal SAM fold C9E88_RS07090 PF01612 3'-5' exonuclease C9E88_RS07110 PF00437 Type II/IV secretion system protein C9E88_RS07120 PF02566 OsmC-like protein C9E88_RS07130 PF00795 Carbon-nitrogen hydrolase C9E88_RS07180 PF04552 Sigma-54, DNA binding domain C9E88_RS07180 PF00309 Sigma-54 factor, Activator interacting domain (AID) C9E88_RS07180 PF04963 Sigma-54 factor, core binding domain C9E88_RS07185 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein C9E88_RS07190 PF01722 BolA-like protein C9E88_RS07195 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C9E88_RS07200 PF01634 ATP phosphoribosyltransferase C9E88_RS07205 PF00815 Histidinol dehydrogenase C9E88_RS07210 PF00155 Aminotransferase class I and II C9E88_RS07215 PF04715 Anthranilate synthase component I, N terminal region C9E88_RS07215 PF00425 chorismate binding enzyme C9E88_RS07255 PF00293 NUDIX domain C9E88_RS07260 PF00132 Bacterial transferase hexapeptide (six repeats) C9E88_RS07265 PF00814 Glycoprotease family C9E88_RS07270 PF02673 Bacitracin resistance protein BacA C9E88_RS07275 PF04445 Putative SAM-dependent methyltransferase C9E88_RS07285 PF00756 Putative esterase C9E88_RS07295 PF00834 Ribulose-phosphate 3 epimerase family C9E88_RS07305 PF07731 Multicopper oxidase C9E88_RS07305 PF00394 Multicopper oxidase C9E88_RS07305 PF07732 Multicopper oxidase C9E88_RS07320 PF00893 Small Multidrug Resistance protein C9E88_RS07325 PF00893 Small Multidrug Resistance protein C9E88_RS07330 PF08378 Nuclease-related domain C9E88_RS07340 PF01207 Dihydrouridine synthase (Dus) C9E88_RS07365 PF00114 Pilin (bacterial filament) C9E88_RS07365 PF07963 Prokaryotic N-terminal methylation motif C9E88_RS07375 PF02978 Signal peptide binding domain C9E88_RS07375 PF00448 SRP54-type protein, GTPase domain C9E88_RS07375 PF02881 SRP54-type protein, helical bundle domain C9E88_RS07385 PF03309 Type III pantothenate kinase C9E88_RS07395 PF01925 Sulfite exporter TauE/SafE C9E88_RS07405 PF02463 RecF/RecN/SMC N terminal domain C9E88_RS07415 PF12826 Helix-hairpin-helix motif C9E88_RS07415 PF03119 NAD-dependent DNA ligase C4 zinc finger domain C9E88_RS07415 PF03120 NAD-dependent DNA ligase OB-fold domain C9E88_RS07415 PF01653 NAD-dependent DNA ligase adenylation domain C9E88_RS07415 PF00533 BRCA1 C Terminus (BRCT) domain C9E88_RS07420 PF16363 GDP-mannose 4,6 dehydratase C9E88_RS07435 PF05971 RNA methyltransferase C9E88_RS07440 PF00210 Ferritin-like domain C9E88_RS07445 PF00578 AhpC/TSA family C9E88_RS07455 PF12697 Alpha/beta hydrolase family C9E88_RS07460 PF00202 Aminotransferase class-III C9E88_RS07460 PF06968 Biotin and Thiamin Synthesis associated domain C9E88_RS07460 PF04055 Radical SAM superfamily C9E88_RS07465 PF00155 Aminotransferase class I and II C9E88_RS07485 PF01479 S4 domain C9E88_RS07485 PF00849 RNA pseudouridylate synthase C9E88_RS07490 PF04079 Segregation and condensation complex subunit ScpB C9E88_RS07495 PF02616 Segregation and condensation protein ScpA C9E88_RS07505 PF01300 Telomere recombination C9E88_RS07510 PF04315 Elongation factor P hydroxylase C9E88_RS07515 PF02620 Large ribosomal RNA subunit accumulation protein YceD C9E88_RS07520 PF01783 Ribosomal L32p protein family C9E88_RS07525 PF00698 Acyl transferase domain C9E88_RS07535 PF00550 Phosphopantetheine attachment site C9E88_RS07540 PF01476 LysM domain C9E88_RS07540 PF04972 BON domain C9E88_RS07545 PF03653 Uncharacterised protein family (UPF0093) C9E88_RS07550 PF00109 Beta-ketoacyl synthase, N-terminal domain C9E88_RS07550 PF02801 Beta-ketoacyl synthase, C-terminal domain C9E88_RS07560 PF00164 Ribosomal protein S12/S23 C9E88_RS07565 PF00177 Ribosomal protein S7p/S5e C9E88_RS07570 PF03144 Elongation factor Tu domain 2 C9E88_RS07570 PF14492 Elongation Factor G, domain II C9E88_RS07570 PF00679 Elongation factor G C-terminus C9E88_RS07570 PF00009 Elongation factor Tu GTP binding domain C9E88_RS07570 PF03764 Elongation factor G, domain IV C9E88_RS07575 PF00009 Elongation factor Tu GTP binding domain C9E88_RS07575 PF03144 Elongation factor Tu domain 2 C9E88_RS07575 PF03143 Elongation factor Tu C-terminal domain C9E88_RS07585 PF00583 Acetyltransferase (GNAT) family C9E88_RS07590 PF04376 Arginine-tRNA-protein transferase, N terminus C9E88_RS07590 PF04377 Arginine-tRNA-protein transferase, C terminus C9E88_RS07595 PF03588 Leucyl/phenylalanyl-tRNA protein transferase C9E88_RS07600 PF07992 Pyridine nucleotide-disulphide oxidoreductase C9E88_RS07605 PF17854 FtsK alpha domain C9E88_RS07605 PF09397 Ftsk gamma domain C9E88_RS07605 PF13491 4TM region of DNA translocase FtsK/SpoIIIE C9E88_RS07605 PF01580 FtsK/SpoIIIE family C9E88_RS07625 PF13018 Extended Signal Peptide of Type V secretion system C9E88_RS07625 PF05658 Head domain of trimeric autotransporter adhesin C9E88_RS07625 PF03895 YadA-like membrane anchor domain C9E88_RS07625 PF05662 Coiled stalk of trimeric autotransporter adhesin C9E88_RS07640 PF03776 Septum formation topological specificity factor MinE C9E88_RS07645 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain C9E88_RS07650 PF03775 Septum formation inhibitor MinC, C-terminal domain C9E88_RS07660 PF01553 Acyltransferase C9E88_RS07665 PF13488 Glycine zipper C9E88_RS07665 PF00691 OmpA family C9E88_RS07670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9E88_RS07670 PF03466 LysR substrate binding domain C9E88_RS07675 PF00970 Oxidoreductase FAD-binding domain C9E88_RS07675 PF00175 Oxidoreductase NAD-binding domain C9E88_RS07690 PF10609 NUBPL iron-transfer P-loop NTPase C9E88_RS07700 PF00692 dUTPase C9E88_RS07725 PF04073 Aminoacyl-tRNA editing domain C9E88_RS07725 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C9E88_RS07725 PF03129 Anticodon binding domain C9E88_RS07730 PF00873 AcrB/AcrD/AcrF family C9E88_RS07735 PF13533 Biotin-lipoyl like C9E88_RS07745 PF00072 Response regulator receiver domain C9E88_RS07750 PF00072 Response regulator receiver domain C9E88_RS07755 PF01584 CheW-like domain C9E88_RS07760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C9E88_RS07760 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term C9E88_RS07765 PF00072 Response regulator receiver domain C9E88_RS07765 PF01627 Hpt domain C9E88_RS07765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9E88_RS07765 PF01584 CheW-like domain C9E88_RS07775 PF07687 Peptidase dimerisation domain C9E88_RS07775 PF01546 Peptidase family M20/M25/M40 C9E88_RS07780 PF08085 Entericidin EcnA/B family C9E88_RS07790 PF04304 Protein of unknown function (DUF454) C9E88_RS07850 PF00175 Oxidoreductase NAD-binding domain C9E88_RS07850 PF00667 FAD binding domain C9E88_RS07850 PF00258 Flavodoxin C9E88_RS07860 PF12805 FUSC-like inner membrane protein yccS C9E88_RS07865 PF07690 Major Facilitator Superfamily C9E88_RS07870 PF00881 Nitroreductase family C9E88_RS07880 PF03616 Sodium/glutamate symporter C9E88_RS07885 PF01235 Sodium:alanine symporter family C9E88_RS07890 PF01734 Patatin-like phospholipase C9E88_RS07900 PF03061 Thioesterase superfamily C9E88_RS07905 PF00440 Bacterial regulatory proteins, tetR family C9E88_RS07905 PF16859 Tetracyclin repressor-like, C-terminal domain C9E88_RS07910 PF07690 Major Facilitator Superfamily C9E88_RS07915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9E88_RS07915 PF03466 LysR substrate binding domain C9E88_RS07920 PF01494 FAD binding domain C9E88_RS07930 PF07683 Cobalamin synthesis protein cobW C-terminal domain C9E88_RS07930 PF02492 CobW/HypB/UreG, nucleotide-binding domain C9E88_RS07935 PF07152 YaeQ protein C9E88_RS07940 PF02308 MgtC family C9E88_RS07945 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C9E88_RS07950 PF00990 Diguanylate cyclase, GGDEF domain C9E88_RS07985 PF00083 Sugar (and other) transporter C9E88_RS07985 PF08946 Osmosensory transporter coiled coil C9E88_RS08005 PF01327 Polypeptide deformylase C9E88_RS08015 PF07690 Major Facilitator Superfamily C9E88_RS08025 PF13361 UvrD-like helicase C-terminal domain C9E88_RS08025 PF00580 UvrD/REP helicase N-terminal domain C9E88_RS08030 PF02733 Dak1 domain C9E88_RS08035 PF17151 Periplasmic sensor domain C9E88_RS08035 PF00990 Diguanylate cyclase, GGDEF domain C9E88_RS08040 PF04480 Protein of unknown function (DUF559) C9E88_RS08055 PF02574 Homocysteine S-methyltransferase C9E88_RS08055 PF02965 Vitamin B12 dependent methionine synthase, activation domain C9E88_RS08055 PF02310 B12 binding domain C9E88_RS08055 PF00809 Pterin binding enzyme C9E88_RS08055 PF02607 B12 binding domain C9E88_RS08060 PF01384 Phosphate transporter family C9E88_RS08085 PF01106 NifU-like domain C9E88_RS08085 PF01521 Iron-sulphur cluster biosynthesis C9E88_RS08090 PF07715 TonB-dependent Receptor Plug Domain C9E88_RS08090 PF00593 TonB dependent receptor C9E88_RS08100 PF00561 alpha/beta hydrolase fold C9E88_RS08105 PF00484 Carbonic anhydrase C9E88_RS08110 PF13472 GDSL-like Lipase/Acylhydrolase family C9E88_RS08115 PF00005 ABC transporter C9E88_RS08125 PF01694 Rhomboid family C9E88_RS08130 PF00912 Transglycosylase C9E88_RS08135 PF02503 Polyphosphate kinase middle domain C9E88_RS08135 PF13089 Polyphosphate kinase N-terminal domain C9E88_RS08135 PF13090 Polyphosphate kinase C-terminal domain 2 C9E88_RS08135 PF17941 Polyphosphate kinase C-terminal domain 1 C9E88_RS08140 PF00072 Response regulator receiver domain C9E88_RS08140 PF00196 Bacterial regulatory proteins, luxR family C9E88_RS08145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9E88_RS08145 PF03466 LysR substrate binding domain C9E88_RS08150 PF12697 Alpha/beta hydrolase family C9E88_RS08155 PF18113 Rubredoxin binding C-terminal domain C9E88_RS08155 PF07992 Pyridine nucleotide-disulphide oxidoreductase C9E88_RS08160 PF00301 Rubredoxin C9E88_RS08165 PF00156 Phosphoribosyl transferase domain C9E88_RS08175 PF01336 OB-fold nucleic acid binding domain C9E88_RS08175 PF00152 tRNA synthetases class II (D, K and N) C9E88_RS08185 PF00579 tRNA synthetases class I (W and Y) C9E88_RS08190 PF05661 Protein of unknown function (DUF808) C9E88_RS08195 PF04228 Putative neutral zinc metallopeptidase C9E88_RS08205 PF00999 Sodium/hydrogen exchanger family C9E88_RS08240 PF00582 Universal stress protein family C9E88_RS08255 PF00795 Carbon-nitrogen hydrolase C9E88_RS08255 PF02540 NAD synthase C9E88_RS08260 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) C9E88_RS08260 PF13296 Putative type VI secretion system Rhs element Vgr C9E88_RS08260 PF04717 Type VI secretion system, phage-baseplate injector C9E88_RS08265 PF07728 AAA domain (dynein-related subfamily) C9E88_RS08265 PF12592 Protein of unknown function (DUF3763) C9E88_RS08265 PF17868 AAA lid domain C9E88_RS08270 PF05762 VWA domain containing CoxE-like protein C9E88_RS08285 PF00743 Flavin-binding monooxygenase-like C9E88_RS08290 PF00285 Citrate synthase, C-terminal domain C9E88_RS08295 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit C9E88_RS08300 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit C9E88_RS08305 PF02910 Fumarate reductase flavoprotein C-term C9E88_RS08305 PF00890 FAD binding domain C9E88_RS08310 PF13085 2Fe-2S iron-sulfur cluster binding domain C9E88_RS08315 PF16870 2-oxoglutarate dehydrogenase C-terminal C9E88_RS08315 PF16078 2-oxoglutarate dehydrogenase N-terminus C9E88_RS08315 PF02779 Transketolase, pyrimidine binding domain C9E88_RS08315 PF00676 Dehydrogenase E1 component C9E88_RS08320 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C9E88_RS08320 PF00364 Biotin-requiring enzyme C9E88_RS08320 PF02817 e3 binding domain C9E88_RS08325 PF07992 Pyridine nucleotide-disulphide oxidoreductase C9E88_RS08325 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C9E88_RS08330 PF08442 ATP-grasp domain C9E88_RS08330 PF00549 CoA-ligase C9E88_RS08335 PF02629 CoA binding domain C9E88_RS08335 PF00549 CoA-ligase C9E88_RS08340 PF15975 Flotillin C9E88_RS08340 PF01145 SPFH domain / Band 7 family C9E88_RS08355 PF01507 Phosphoadenosine phosphosulfate reductase family C9E88_RS08360 PF00009 Elongation factor Tu GTP binding domain C9E88_RS08380 PF03551 Transcriptional regulator PadR-like family C9E88_RS08400 PF08240 Alcohol dehydrogenase GroES-like domain C9E88_RS08400 PF00107 Zinc-binding dehydrogenase C9E88_RS08420 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain C9E88_RS08420 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain C9E88_RS08435 PF00083 Sugar (and other) transporter C9E88_RS08440 PF01266 FAD dependent oxidoreductase C9E88_RS08440 PF16901 C-terminal domain of alpha-glycerophosphate oxidase C9E88_RS08450 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain C9E88_RS08450 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain C9E88_RS08455 PF00781 Diacylglycerol kinase catalytic domain C9E88_RS08460 PF00149 Calcineurin-like phosphoesterase C9E88_RS08465 PF00166 Chaperonin 10 Kd subunit C9E88_RS08470 PF00118 TCP-1/cpn60 chaperonin family C9E88_RS08490 PF00196 Bacterial regulatory proteins, luxR family C9E88_RS08500 PF00593 TonB dependent receptor C9E88_RS08500 PF07715 TonB-dependent Receptor Plug Domain C9E88_RS08505 PF17185 NlpE C-terminal OB domain C9E88_RS08505 PF04170 NlpE N-terminal domain C9E88_RS08510 PF01553 Acyltransferase C9E88_RS08535 PF00905 Penicillin binding protein transpeptidase domain C9E88_RS08535 PF03717 Penicillin-binding Protein dimerisation domain C9E88_RS08550 PF05191 Adenylate kinase, active site lid C9E88_RS08560 PF00633 Helix-hairpin-helix motif C9E88_RS08560 PF10576 Iron-sulfur binding domain of endonuclease III C9E88_RS08560 PF00730 HhH-GPD superfamily base excision DNA repair protein C9E88_RS08565 PF04060 Putative Fe-S cluster C9E88_RS08570 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain C9E88_RS08570 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C9E88_RS08580 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase C9E88_RS08585 PF02590 Predicted SPOUT methyltransferase C9E88_RS08590 PF04389 Peptidase family M28 C9E88_RS08595 PF05362 Lon protease (S16) C-terminal proteolytic domain C9E88_RS08595 PF02190 ATP-dependent protease La (LON) substrate-binding domain C9E88_RS08595 PF00004 ATPase family associated with various cellular activities (AAA) C9E88_RS08600 PF01812 5-formyltetrahydrofolate cyclo-ligase family C9E88_RS08615 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding C9E88_RS08615 PF18381 YcaO cyclodehydratase C-terminal domain C9E88_RS08640 PF03695 Uncharacterised protein family (UPF0149) C9E88_RS08645 PF05195 Aminopeptidase P, N-terminal domain C9E88_RS08645 PF00557 Metallopeptidase family M24 C9E88_RS08655 PF09278 MerR, DNA binding C9E88_RS08655 PF00376 MerR family regulatory protein C9E88_RS08660 PF00440 Bacterial regulatory proteins, tetR family C9E88_RS08670 PF00561 alpha/beta hydrolase fold C9E88_RS08675 PF01494 FAD binding domain C9E88_RS08680 PF01494 FAD binding domain C9E88_RS08695 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C9E88_RS08705 PF02021 Uncharacterised protein family UPF0102 C9E88_RS08715 PF07859 alpha/beta hydrolase fold C9E88_RS08725 PF09297 NADH pyrophosphatase zinc ribbon domain C9E88_RS08725 PF00293 NUDIX domain C9E88_RS08735 PF00929 Exonuclease C9E88_RS08740 PF01476 LysM domain C9E88_RS08740 PF01464 Transglycosylase SLT domain C9E88_RS08745 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C9E88_RS08750 PF00528 Binding-protein-dependent transport system inner membrane component C9E88_RS08755 PF12911 N-terminal TM domain of oligopeptide transport permease C C9E88_RS08755 PF00528 Binding-protein-dependent transport system inner membrane component C9E88_RS08760 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C9E88_RS08760 PF00005 ABC transporter C9E88_RS08765 PF07992 Pyridine nucleotide-disulphide oxidoreductase C9E88_RS08765 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C9E88_RS08795 PF00324 Amino acid permease C9E88_RS08805 PF00324 Amino acid permease C9E88_RS08830 PF00929 Exonuclease C9E88_RS08835 PF01979 Amidohydrolase family C9E88_RS08840 PF00990 Diguanylate cyclase, GGDEF domain C9E88_RS08840 PF08448 PAS fold C9E88_RS08845 PF00764 Arginosuccinate synthase C9E88_RS08855 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C9E88_RS08855 PF07992 Pyridine nucleotide-disulphide oxidoreductase C9E88_RS08910 PF02661 Fic/DOC family C9E88_RS08920 PF02384 N-6 DNA Methylase C9E88_RS08990 PF02678 Pirin C9E88_RS08990 PF17954 Quercetinase C-terminal cupin domain C9E88_RS09000 PF01208 Uroporphyrinogen decarboxylase (URO-D) C9E88_RS09005 PF05675 Protein of unknown function (DUF817) C9E88_RS09020 PF00990 Diguanylate cyclase, GGDEF domain C9E88_RS09030 PF01227 GTP cyclohydrolase I C9E88_RS09040 PF01593 Flavin containing amine oxidoreductase C9E88_RS09045 PF00218 Indole-3-glycerol phosphate synthase C9E88_RS09050 PF00591 Glycosyl transferase family, a/b domain C9E88_RS09050 PF02885 Glycosyl transferase family, helical bundle domain C9E88_RS09055 PF00117 Glutamine amidotransferase class-I C9E88_RS09060 PF05159 Capsule polysaccharide biosynthesis protein C9E88_RS09065 PF00483 Nucleotidyl transferase C9E88_RS09065 PF01050 Mannose-6-phosphate isomerase C9E88_RS09075 PF01061 ABC-2 type transporter C9E88_RS09080 PF00005 ABC transporter C9E88_RS09085 PF00534 Glycosyl transferases group 1 C9E88_RS09085 PF13439 Glycosyltransferase Family 4 C9E88_RS09100 PF02563 Polysaccharide biosynthesis/export protein C9E88_RS09105 PF13439 Glycosyltransferase Family 4 C9E88_RS09105 PF00534 Glycosyl transferases group 1 C9E88_RS09110 PF05159 Capsule polysaccharide biosynthesis protein C9E88_RS09115 PF00534 Glycosyl transferases group 1 C9E88_RS09115 PF13439 Glycosyltransferase Family 4 C9E88_RS09120 PF03951 Glutamine synthetase, beta-Grasp domain C9E88_RS09120 PF00120 Glutamine synthetase, catalytic domain C9E88_RS09135 PF04345 Chorismate lyase C9E88_RS09140 PF01040 UbiA prenyltransferase family C9E88_RS09150 PF03466 LysR substrate binding domain C9E88_RS09150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9E88_RS09155 PF01494 FAD binding domain C9E88_RS09205 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain C9E88_RS09205 PF02777 Iron/manganese superoxide dismutases, C-terminal domain C9E88_RS09210 PF01784 NIF3 (NGG1p interacting factor 3) C9E88_RS09215 PF17820 PDZ domain C9E88_RS09215 PF13180 PDZ domain C9E88_RS09225 PF12697 Alpha/beta hydrolase family C9E88_RS09230 PF00296 Luciferase-like monooxygenase C9E88_RS09235 PF00857 Isochorismatase family C9E88_RS09240 PF01042 Endoribonuclease L-PSP C9E88_RS09245 PF01613 Flavin reductase like domain C9E88_RS09250 PF00860 Permease family C9E88_RS09255 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase C9E88_RS09255 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C9E88_RS09270 PF04055 Radical SAM superfamily C9E88_RS09275 PF07992 Pyridine nucleotide-disulphide oxidoreductase C9E88_RS09275 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C9E88_RS09285 PF02668 Taurine catabolism dioxygenase TauD, TfdA family C9E88_RS09305 PF00990 Diguanylate cyclase, GGDEF domain C9E88_RS09305 PF08448 PAS fold C9E88_RS09315 PF00271 Helicase conserved C-terminal domain C9E88_RS09315 PF04851 Type III restriction enzyme, res subunit C9E88_RS09315 PF02151 UvrB/uvrC motif C9E88_RS09315 PF12344 Ultra-violet resistance protein B C9E88_RS09315 PF17757 UvrB interaction domain C9E88_RS09335 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C9E88_RS09335 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C9E88_RS09355 PF05368 NmrA-like family C9E88_RS09360 PF01638 HxlR-like helix-turn-helix C9E88_RS09365 PF07690 Major Facilitator Superfamily C9E88_RS09370 PF01926 50S ribosome-binding GTPase C9E88_RS09370 PF01018 GTP1/OBG C9E88_RS09375 PF00696 Amino acid kinase family C9E88_RS09375 PF01472 PUA domain C9E88_RS09380 PF01569 PAP2 superfamily C9E88_RS09390 PF00202 Aminotransferase class-III C9E88_RS09395 PF00282 Pyridoxal-dependent decarboxylase conserved domain C9E88_RS09405 PF12849 PBP superfamily domain C9E88_RS09410 PF00528 Binding-protein-dependent transport system inner membrane component C9E88_RS09415 PF00528 Binding-protein-dependent transport system inner membrane component C9E88_RS09420 PF00005 ABC transporter C9E88_RS09435 PF01343 Peptidase family S49 C9E88_RS09435 PF08496 Peptidase family S49 N-terminal C9E88_RS09465 PF08328 Adenylosuccinate lyase C-terminal C9E88_RS09465 PF00206 Lyase C9E88_RS09470 PF04356 Protein of unknown function (DUF489) C9E88_RS09480 PF00293 NUDIX domain C9E88_RS09485 PF07883 Cupin domain C9E88_RS09485 PF01381 Helix-turn-helix C9E88_RS09490 PF13536 Putative multidrug resistance efflux transporter C9E88_RS09500 PF00132 Bacterial transferase hexapeptide (six repeats) C9E88_RS09505 PF07943 Penicillin-binding protein 5, C-terminal domain C9E88_RS09505 PF00768 D-alanyl-D-alanine carboxypeptidase C9E88_RS09520 PF01975 Survival protein SurE C9E88_RS09525 PF01476 LysM domain C9E88_RS09525 PF01551 Peptidase family M23 C9E88_RS09530 PF03466 LysR substrate binding domain C9E88_RS09530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9E88_RS09535 PF00202 Aminotransferase class-III C9E88_RS09540 PF00462 Glutaredoxin C9E88_RS09545 PF05362 Lon protease (S16) C-terminal proteolytic domain C9E88_RS09545 PF13654 AAA domain C9E88_RS09550 PF07690 Major Facilitator Superfamily C9E88_RS09555 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C9E88_RS09560 PF13593 SBF-like CPA transporter family (DUF4137) C9E88_RS09570 PF01197 Ribosomal protein L31 C9E88_RS09585 PF04055 Radical SAM superfamily C9E88_RS09590 PF08207 Elongation factor P (EF-P) KOW-like domain C9E88_RS09590 PF09285 Elongation factor P, C-terminal C9E88_RS09590 PF01132 Elongation factor P (EF-P) OB domain C9E88_RS09595 PF02554 Carbon starvation protein CstA C9E88_RS09595 PF13722 5TM C-terminal transporter carbon starvation CstA C9E88_RS09600 PF04328 Selenoprotein, putative C9E88_RS09605 PF07726 ATPase family associated with various cellular activities (AAA) C9E88_RS09605 PF17863 AAA lid domain C9E88_RS09615 PF01841 Transglutaminase-like superfamily C9E88_RS09615 PF13559 Domain of unknown function (DUF4129) C9E88_RS09615 PF11992 Domain of unknown function (DUF3488) C9E88_RS09700 PF01867 CRISPR associated protein Cas1 C9E88_RS09725 PF02566 OsmC-like protein C9E88_RS09730 PF13545 Crp-like helix-turn-helix domain C9E88_RS09730 PF00027 Cyclic nucleotide-binding domain C9E88_RS09735 PF00248 Aldo/keto reductase family C9E88_RS09740 PF17871 AAA lid domain C9E88_RS09740 PF02861 Clp amino terminal domain, pathogenicity island component C9E88_RS09740 PF00004 ATPase family associated with various cellular activities (AAA) C9E88_RS09740 PF07724 AAA domain (Cdc48 subfamily) C9E88_RS09740 PF10431 C-terminal, D2-small domain, of ClpB protein C9E88_RS09780 PF01170 Putative RNA methylase family UPF0020 C9E88_RS09780 PF02926 THUMP domain C9E88_RS09780 PF10672 S-adenosylmethionine-dependent methyltransferase C9E88_RS09790 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C9E88_RS09790 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C9E88_RS09795 PF01979 Amidohydrolase family C9E88_RS09800 PF00691 OmpA family C9E88_RS09820 PF00732 GMC oxidoreductase C9E88_RS09820 PF05199 GMC oxidoreductase C9E88_RS09825 PF00171 Aldehyde dehydrogenase family C9E88_RS09830 PF02390 Putative methyltransferase C9E88_RS09840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9E88_RS09840 PF05231 MASE1 C9E88_RS09840 PF07730 Histidine kinase C9E88_RS09845 PF01740 STAS domain C9E88_RS09845 PF00916 Sulfate permease family C9E88_RS09850 PF00043 Glutathione S-transferase, C-terminal domain C9E88_RS09850 PF02798 Glutathione S-transferase, N-terminal domain C9E88_RS09860 PF05690 Thiazole biosynthesis protein ThiG C9E88_RS09870 PF04241 Protein of unknown function (DUF423) C9E88_RS09880 PF04542 Sigma-70 region 2 C9E88_RS09880 PF04545 Sigma-70, region 4 C9E88_RS09880 PF00140 Sigma-70 factor, region 1.2 C9E88_RS09890 PF00313 'Cold-shock' DNA-binding domain C9E88_RS09895 PF00270 DEAD/DEAH box helicase C9E88_RS09895 PF00271 Helicase conserved C-terminal domain C9E88_RS09905 PF00881 Nitroreductase family C9E88_RS09910 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus C9E88_RS09910 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus C9E88_RS09930 PF01180 Dihydroorotate dehydrogenase C9E88_RS09940 PF00156 Phosphoribosyl transferase domain C9E88_RS09955 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C9E88_RS09955 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C9E88_RS09960 PF01435 Peptidase family M48 C9E88_RS09975 PF09424 Yqey-like protein C9E88_RS09980 PF01165 Ribosomal protein S21 C9E88_RS09985 PF00814 Glycoprotease family C9E88_RS09990 PF01699 Sodium/calcium exchanger protein C9E88_RS10010 PF00069 Protein kinase domain C9E88_RS10010 PF03793 PASTA domain C9E88_RS10070 PF00753 Metallo-beta-lactamase superfamily C9E88_RS10070 PF16123 Hydroxyacylglutathione hydrolase C-terminus C9E88_RS10075 PF01757 Acyltransferase family C9E88_RS10080 PF01613 Flavin reductase like domain C9E88_RS10085 PF02567 Phenazine biosynthesis-like protein C9E88_RS10090 PF05193 Peptidase M16 inactive domain C9E88_RS10090 PF00675 Insulinase (Peptidase family M16) C9E88_RS10120 PF02581 Thiamine monophosphate synthase C9E88_RS10125 PF00202 Aminotransferase class-III C9E88_RS10130 PF03928 Haem-degrading C9E88_RS10135 PF13737 Transposase DDE domain C9E88_RS10145 PF00849 RNA pseudouridylate synthase C9E88_RS10150 PF18337 RapA N-terminal Tudor like domain C9E88_RS10150 PF18339 RapA N-terminal Tudor like domain 1 C9E88_RS10150 PF00176 SNF2 family N-terminal domain C9E88_RS10150 PF00271 Helicase conserved C-terminal domain C9E88_RS10150 PF12137 RNA polymerase recycling family C-terminal C9E88_RS10180 PF00196 Bacterial regulatory proteins, luxR family C9E88_RS10180 PF00072 Response regulator receiver domain C9E88_RS10185 PF00440 Bacterial regulatory proteins, tetR family C9E88_RS10190 PF00175 Oxidoreductase NAD-binding domain C9E88_RS10190 PF00111 2Fe-2S iron-sulfur cluster binding domain C9E88_RS10190 PF00970 Oxidoreductase FAD-binding domain C9E88_RS10195 PF00487 Fatty acid desaturase C9E88_RS10205 PF07759 Protein of unknown function (DUF1615) C9E88_RS10210 PF14883 Hypothetical glycosyl hydrolase family 13 C9E88_RS10210 PF01522 Polysaccharide deacetylase C9E88_RS10215 PF00535 Glycosyl transferase family 2 C9E88_RS10225 PF01207 Dihydrouridine synthase (Dus) C9E88_RS10230 PF03060 Nitronate monooxygenase C9E88_RS10250 PF04143 Sulphur transport C9E88_RS10270 PF02772 S-adenosylmethionine synthetase, central domain C9E88_RS10270 PF02773 S-adenosylmethionine synthetase, C-terminal domain C9E88_RS10270 PF00438 S-adenosylmethionine synthetase, N-terminal domain C9E88_RS10275 PF02779 Transketolase, pyrimidine binding domain C9E88_RS10275 PF02780 Transketolase, C-terminal domain C9E88_RS10275 PF00456 Transketolase, thiamine diphosphate binding domain C9E88_RS10300 PF01810 LysE type translocator C9E88_RS10305 PF02540 NAD synthase C9E88_RS10305 PF00958 GMP synthase C terminal domain C9E88_RS10305 PF00117 Glutamine amidotransferase class-I C9E88_RS10320 PF01406 tRNA synthetases class I (C) catalytic domain C9E88_RS10320 PF09190 DALR domain C9E88_RS10330 PF00571 CBS domain C9E88_RS10330 PF01380 SIS domain C9E88_RS10345 PF03968 OstA-like protein C9E88_RS10350 PF00005 ABC transporter C9E88_RS10350 PF12399 Branched-chain amino acid ATP-binding cassette transporter C9E88_RS10355 PF02321 Outer membrane efflux protein C9E88_RS10360 PF00664 ABC transporter transmembrane region C9E88_RS10360 PF00005 ABC transporter C9E88_RS10360 PF03412 Peptidase C39 family C9E88_RS10370 PF01205 Uncharacterized protein family UPF0029 C9E88_RS10375 PF12464 Maltose acetyltransferase C9E88_RS10375 PF14602 Hexapeptide repeat of succinyl-transferase C9E88_RS10380 PF00582 Universal stress protein family C9E88_RS10385 PF01596 O-methyltransferase C9E88_RS10395 PF00037 4Fe-4S binding domain C9E88_RS10395 PF11953 Domain of unknown function (DUF3470) C9E88_RS10400 PF00488 MutS domain V C9E88_RS10400 PF01624 MutS domain I C9E88_RS10400 PF05188 MutS domain II C9E88_RS10400 PF05190 MutS family domain IV C9E88_RS10400 PF05192 MutS domain III C9E88_RS10405 PF00990 Diguanylate cyclase, GGDEF domain C9E88_RS10425 PF00132 Bacterial transferase hexapeptide (six repeats) C9E88_RS10430 PF00588 SpoU rRNA Methylase family C9E88_RS10435 PF07733 Bacterial DNA polymerase III alpha NTPase domain C9E88_RS10435 PF01336 OB-fold nucleic acid binding domain C9E88_RS10435 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C9E88_RS10435 PF14579 Helix-hairpin-helix motif C9E88_RS10435 PF02811 PHP domain C9E88_RS10445 PF00528 Binding-protein-dependent transport system inner membrane component C9E88_RS10450 PF00005 ABC transporter C9E88_RS10450 PF09383 NIL domain C9E88_RS10455 PF03180 NLPA lipoprotein C9E88_RS10470 PF13302 Acetyltransferase (GNAT) domain C9E88_RS10480 PF02844 Phosphoribosylglycinamide synthetase, N domain C9E88_RS10480 PF02843 Phosphoribosylglycinamide synthetase, C domain C9E88_RS10480 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain C9E88_RS10485 PF01808 AICARFT/IMPCHase bienzyme C9E88_RS10485 PF02142 MGS-like domain C9E88_RS10490 PF02954 Bacterial regulatory protein, Fis family C9E88_RS10520 PF13932 GidA associated domain C9E88_RS10520 PF01134 Glucose inhibited division protein A C9E88_RS10525 PF13737 Transposase DDE domain C9E88_RS10535 PF07690 Major Facilitator Superfamily C9E88_RS10545 PF00158 Sigma-54 interaction domain C9E88_RS10545 PF02954 Bacterial regulatory protein, Fis family C9E88_RS10545 PF00072 Response regulator receiver domain C9E88_RS10550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9E88_RS10550 PF00512 His Kinase A (phospho-acceptor) domain C9E88_RS10550 PF00989 PAS fold C9E88_RS10555 PF04055 Radical SAM superfamily C9E88_RS10555 PF00919 Uncharacterized protein family UPF0004 C9E88_RS10555 PF18693 TRAM domain C9E88_RS10560 PF00696 Amino acid kinase family C9E88_RS10565 PF01765 Ribosome recycling factor C9E88_RS10570 PF01255 Putative undecaprenyl diphosphate synthase C9E88_RS10580 PF13288 DXP reductoisomerase C-terminal domain C9E88_RS10580 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain C9E88_RS10580 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase C9E88_RS10585 PF13180 PDZ domain C9E88_RS10585 PF02163 Peptidase family M50 C9E88_RS10585 PF17820 PDZ domain C9E88_RS10590 PF01103 Surface antigen C9E88_RS10590 PF07244 Surface antigen variable number repeat C9E88_RS10600 PF00132 Bacterial transferase hexapeptide (six repeats) C9E88_RS10600 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD C9E88_RS10605 PF07977 FabA-like domain C9E88_RS10610 PF00132 Bacterial transferase hexapeptide (six repeats) C9E88_RS10610 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 C9E88_RS10625 PF02631 RecX family C9E88_RS10630 PF00154 recA bacterial DNA recombination protein C9E88_RS10635 PF01479 S4 domain C9E88_RS10640 PF13419 Haloacid dehalogenase-like hydrolase C9E88_RS10645 PF00459 Inositol monophosphatase family C9E88_RS10660 PF01649 Ribosomal protein S20 C9E88_RS10665 PF13460 NAD(P)H-binding C9E88_RS10670 PF03737 Aldolase/RraA C9E88_RS10680 PF00196 Bacterial regulatory proteins, luxR family C9E88_RS10680 PF00072 Response regulator receiver domain C9E88_RS10685 PF07730 Histidine kinase C9E88_RS10685 PF05231 MASE1 C9E88_RS10685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9E88_RS10690 PF08007 Cupin superfamily protein C9E88_RS10705 PF02545 Maf-like protein C9E88_RS10715 PF00162 Phosphoglycerate kinase C9E88_RS10725 PF01116 Fructose-bisphosphate aldolase class-II C9E88_RS10745 PF00881 Nitroreductase family C9E88_RS10755 PF03328 HpcH/HpaI aldolase/citrate lyase family C9E88_RS10765 PF00296 Luciferase-like monooxygenase C9E88_RS10770 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C9E88_RS10770 PF02770 Acyl-CoA dehydrogenase, middle domain C9E88_RS10770 PF08028 Acyl-CoA dehydrogenase, C-terminal domain C9E88_RS10775 PF02770 Acyl-CoA dehydrogenase, middle domain C9E88_RS10775 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C9E88_RS10775 PF08028 Acyl-CoA dehydrogenase, C-terminal domain C9E88_RS10780 PF00149 Calcineurin-like phosphoesterase C9E88_RS10785 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C9E88_RS10790 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain C9E88_RS10790 PF00749 tRNA synthetases class I (E and Q), catalytic domain C9E88_RS10795 PF01062 Bestrophin, RFP-TM, chloride channel C9E88_RS10800 PF00580 UvrD/REP helicase N-terminal domain C9E88_RS10800 PF13361 UvrD-like helicase C-terminal domain C9E88_RS10820 PF05958 tRNA (Uracil-5-)-methyltransferase C9E88_RS10825 PF18327 Proline utilization A proline dehydrogenase N-terminal domain C9E88_RS10825 PF14850 DNA-binding domain of Proline dehydrogenase C9E88_RS10825 PF01619 Proline dehydrogenase C9E88_RS10825 PF00171 Aldehyde dehydrogenase family C9E88_RS10830 PF01037 Lrp/AsnC ligand binding domain C9E88_RS10835 PF00474 Sodium:solute symporter family C9E88_RS10840 PF10415 Fumarase C C-terminus C9E88_RS10840 PF00206 Lyase C9E88_RS10850 PF03461 TRCF domain C9E88_RS10850 PF17757 UvrB interaction domain C9E88_RS10850 PF00270 DEAD/DEAH box helicase C9E88_RS10850 PF02559 CarD-like/TRCF domain C9E88_RS10850 PF00271 Helicase conserved C-terminal domain C9E88_RS10860 PF00211 Adenylate and Guanylate cyclase catalytic domain C9E88_RS10865 PF00111 2Fe-2S iron-sulfur cluster binding domain C9E88_RS10870 PF00012 Hsp70 protein C9E88_RS10875 PF00226 DnaJ domain C9E88_RS10875 PF07743 HSCB C-terminal oligomerisation domain C9E88_RS10880 PF01521 Iron-sulphur cluster biosynthesis C9E88_RS10885 PF01592 NifU-like N terminal domain C9E88_RS10890 PF00266 Aminotransferase class-V C9E88_RS10895 PF02082 Transcriptional regulator C9E88_RS10910 PF00216 Bacterial DNA-binding protein C9E88_RS10915 PF09312 SurA N-terminal domain C9E88_RS10925 PF00561 alpha/beta hydrolase fold C9E88_RS10945 PF07290 Protein of unknown function (DUF1449) C9E88_RS10955 PF00294 pfkB family carbohydrate kinase C9E88_RS10970 PF05193 Peptidase M16 inactive domain C9E88_RS10970 PF00675 Insulinase (Peptidase family M16) C9E88_RS10970 PF08367 Peptidase M16C associated C9E88_RS10975 PF02253 Phospholipase A1 C9E88_RS10980 PF02386 Cation transport protein C9E88_RS10985 PF02080 TrkA-C domain C9E88_RS10985 PF02254 TrkA-N domain C9E88_RS11000 PF00585 C-terminal regulatory domain of Threonine dehydratase C9E88_RS11000 PF00291 Pyridoxal-phosphate dependent enzyme C9E88_RS11005 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) C9E88_RS11025 PF13359 DDE superfamily endonuclease C9E88_RS11025 PF13613 Helix-turn-helix of DDE superfamily endonuclease C9E88_RS11030 PF00535 Glycosyl transferase family 2 C9E88_RS11040 PF01118 Semialdehyde dehydrogenase, NAD binding domain C9E88_RS11040 PF02774 Semialdehyde dehydrogenase, dimerisation domain C9E88_RS11050 PF02617 ATP-dependent Clp protease adaptor protein ClpS C9E88_RS11055 PF00004 ATPase family associated with various cellular activities (AAA) C9E88_RS11055 PF17871 AAA lid domain C9E88_RS11055 PF07724 AAA domain (Cdc48 subfamily) C9E88_RS11055 PF02861 Clp amino terminal domain, pathogenicity island component C9E88_RS11055 PF10431 C-terminal, D2-small domain, of ClpB protein C9E88_RS11060 PF02694 Uncharacterised BCR, YnfA/UPF0060 family C9E88_RS11070 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C9E88_RS11070 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C9E88_RS11085 PF00285 Citrate synthase, C-terminal domain C9E88_RS11090 PF00994 Probable molybdopterin binding domain C9E88_RS11090 PF02464 Competence-damaged protein C9E88_RS11090 PF18146 Damage-inducible protein CinA KH domain C9E88_RS11105 PF00583 Acetyltransferase (GNAT) family C9E88_RS11110 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C9E88_RS11110 PF02770 Acyl-CoA dehydrogenase, middle domain C9E88_RS11110 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C9E88_RS11115 PF02770 Acyl-CoA dehydrogenase, middle domain C9E88_RS11115 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C9E88_RS11115 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C9E88_RS11120 PF03109 ABC1 family C9E88_RS11135 PF05175 Methyltransferase small domain C9E88_RS11140 PF01264 Chorismate synthase C9E88_RS11160 PF01266 FAD dependent oxidoreductase C9E88_RS11170 PF02542 YgbB family C9E88_RS11180 PF00793 DAHP synthetase I family C9E88_RS11185 PF01925 Sulfite exporter TauE/SafE C9E88_RS11195 PF02684 Lipid-A-disaccharide synthetase C9E88_RS11205 PF12852 Cupin C9E88_RS11205 PF12833 Helix-turn-helix domain C9E88_RS11210 PF00487 Fatty acid desaturase C9E88_RS11215 PF04073 Aminoacyl-tRNA editing domain C9E88_RS11220 PF06276 Ferric iron reductase FhuF-like transporter C9E88_RS11220 PF04183 IucA / IucC family C9E88_RS11225 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) C9E88_RS11230 PF04183 IucA / IucC family C9E88_RS11230 PF06276 Ferric iron reductase FhuF-like transporter C9E88_RS11245 PF07690 Major Facilitator Superfamily C9E88_RS11250 PF07715 TonB-dependent Receptor Plug Domain C9E88_RS11250 PF00593 TonB dependent receptor C9E88_RS11260 PF13419 Haloacid dehalogenase-like hydrolase C9E88_RS11270 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase C9E88_RS11275 PF02277 Phosphoribosyltransferase C9E88_RS11285 PF02654 Cobalamin-5-phosphate synthase C9E88_RS11295 PF01638 HxlR-like helix-turn-helix C9E88_RS11315 PF02635 DsrE/DsrF-like family C9E88_RS11325 PF16363 GDP-mannose 4,6 dehydratase C9E88_RS11330 PF10415 Fumarase C C-terminus C9E88_RS11330 PF00206 Lyase C9E88_RS11365 PF05525 Branched-chain amino acid transport protein C9E88_RS11370 PF00557 Metallopeptidase family M24 C9E88_RS11375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9E88_RS11375 PF03466 LysR substrate binding domain C9E88_RS11380 PF12697 Alpha/beta hydrolase family C9E88_RS11390 PF07992 Pyridine nucleotide-disulphide oxidoreductase C9E88_RS11390 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C9E88_RS11405 PF07690 Major Facilitator Superfamily C9E88_RS11410 PF00248 Aldo/keto reductase family C9E88_RS11415 PF03466 LysR substrate binding domain C9E88_RS11415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9E88_RS11425 PF06418 CTP synthase N-terminus C9E88_RS11425 PF00117 Glutamine amidotransferase class-I C9E88_RS11430 PF00793 DAHP synthetase I family C9E88_RS11435 PF00113 Enolase, C-terminal TIM barrel domain C9E88_RS11435 PF03952 Enolase, N-terminal domain C9E88_RS11440 PF04977 Septum formation initiator C9E88_RS11445 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase C9E88_RS11450 PF01098 Cell cycle protein C9E88_RS11470 PF08173 Membrane bound YbgT-like protein C9E88_RS11475 PF02322 Cytochrome bd terminal oxidase subunit II C9E88_RS11480 PF01654 Cytochrome bd terminal oxidase subunit I C9E88_RS11490 PF00267 Gram-negative porin C9E88_RS11495 PF01230 HIT domain C9E88_RS11505 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase C9E88_RS11505 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C9E88_RS11515 PF01053 Cys/Met metabolism PLP-dependent enzyme C9E88_RS11520 PF02575 YbaB/EbfC DNA-binding family C9E88_RS11525 PF02132 RecR protein C9E88_RS11525 PF13662 Toprim domain C9E88_RS11530 PF01612 3'-5' exonuclease C9E88_RS11530 PF00570 HRDC domain C9E88_RS11540 PF05166 YcgL domain C9E88_RS11550 PF00004 ATPase family associated with various cellular activities (AAA) C9E88_RS11550 PF01434 Peptidase family M41 C9E88_RS11550 PF17862 AAA+ lid domain C9E88_RS11560 PF00291 Pyridoxal-phosphate dependent enzyme C9E88_RS11570 PF00571 CBS domain C9E88_RS11600 PF00675 Insulinase (Peptidase family M16) C9E88_RS11600 PF05193 Peptidase M16 inactive domain C9E88_RS11605 PF00448 SRP54-type protein, GTPase domain C9E88_RS11605 PF02881 SRP54-type protein, helical bundle domain C9E88_RS11620 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) C9E88_RS11650 PF07694 5TMR of 5TMR-LYT C9E88_RS11650 PF00990 Diguanylate cyclase, GGDEF domain C9E88_RS11665 PF12832 MFS_1 like family C9E88_RS11670 PF00990 Diguanylate cyclase, GGDEF domain C9E88_RS11680 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C9E88_RS11680 PF00289 Biotin carboxylase, N-terminal domain C9E88_RS11680 PF02785 Biotin carboxylase C-terminal domain C9E88_RS11685 PF00364 Biotin-requiring enzyme C9E88_RS11690 PF01220 Dehydroquinase class II C9E88_RS11715 PF04143 Sulphur transport C9E88_RS11725 PF00753 Metallo-beta-lactamase superfamily C9E88_RS11725 PF04273 Putative phosphatase (DUF442) C9E88_RS11730 PF12697 Alpha/beta hydrolase family C9E88_RS11750 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE C9E88_RS11755 PF06812 ImpA, N-terminal, type VI secretion system C9E88_RS11760 PF00004 ATPase family associated with various cellular activities (AAA) C9E88_RS11760 PF07724 AAA domain (Cdc48 subfamily) C9E88_RS11760 PF17871 AAA lid domain C9E88_RS11760 PF10431 C-terminal, D2-small domain, of ClpB protein C9E88_RS11775 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath C9E88_RS11790 PF05947 Type VI secretion system, TssF C9E88_RS11805 PF06761 Intracellular multiplication and human macrophage-killing C9E88_RS11805 PF06744 Type VI secretion protein IcmF C-terminal C9E88_RS11805 PF14331 ImcF-related N-terminal domain C9E88_RS11815 PF00691 OmpA family C9E88_RS11815 PF18393 MotY N-terminal domain C9E88_RS11820 PF01425 Amidase C9E88_RS11840 PF13657 HipA N-terminal domain C9E88_RS11840 PF07804 HipA-like C-terminal domain C9E88_RS11845 PF00440 Bacterial regulatory proteins, tetR family C9E88_RS11850 PF02321 Outer membrane efflux protein C9E88_RS11860 PF00873 AcrB/AcrD/AcrF family C9E88_RS11865 PF09905 DNA-binding protein VF530 C9E88_RS11875 PF00873 AcrB/AcrD/AcrF family C9E88_RS11885 PF02321 Outer membrane efflux protein C9E88_RS11915 PF01557 Fumarylacetoacetate (FAA) hydrolase family C9E88_RS11920 PF01494 FAD binding domain C9E88_RS11925 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C9E88_RS11930 PF00561 alpha/beta hydrolase fold C9E88_RS11955 PF12833 Helix-turn-helix domain C9E88_RS11955 PF02311 AraC-like ligand binding domain C9E88_RS11960 PF02770 Acyl-CoA dehydrogenase, middle domain C9E88_RS11960 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C9E88_RS11960 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C9E88_RS11960 PF12806 Acetyl-CoA dehydrogenase C-terminal like C9E88_RS11965 PF00171 Aldehyde dehydrogenase family C9E88_RS11970 PF07715 TonB-dependent Receptor Plug Domain C9E88_RS11970 PF00593 TonB dependent receptor C9E88_RS11975 PF10414 Sirohaem synthase dimerisation region C9E88_RS11975 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C9E88_RS11975 PF14824 Sirohaem biosynthesis protein central C9E88_RS11980 PF00005 ABC transporter C9E88_RS11980 PF03459 TOBE domain C9E88_RS11985 PF00528 Binding-protein-dependent transport system inner membrane component C9E88_RS11995 PF03454 MoeA C-terminal region (domain IV) C9E88_RS11995 PF03453 MoeA N-terminal region (domain I and II) C9E88_RS11995 PF00994 Probable molybdopterin binding domain C9E88_RS12000 PF01967 MoaC family C9E88_RS12000 PF00994 Probable molybdopterin binding domain C9E88_RS12005 PF02391 MoaE protein C9E88_RS12015 PF04055 Radical SAM superfamily C9E88_RS12015 PF06463 Molybdenum Cofactor Synthesis C C9E88_RS12020 PF12804 MobA-like NTP transferase domain C9E88_RS12025 PF01568 Molydopterin dinucleotide binding domain C9E88_RS12025 PF00384 Molybdopterin oxidoreductase C9E88_RS12025 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C9E88_RS12025 PF04324 BFD-like [2Fe-2S] binding domain C9E88_RS12030 PF07992 Pyridine nucleotide-disulphide oxidoreductase C9E88_RS12030 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C9E88_RS12030 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C9E88_RS12030 PF18267 Rubredoxin NAD+ reductase C-terminal domain C9E88_RS12030 PF04324 BFD-like [2Fe-2S] binding domain C9E88_RS12035 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C9E88_RS12035 PF18267 Rubredoxin NAD+ reductase C-terminal domain C9E88_RS12035 PF07992 Pyridine nucleotide-disulphide oxidoreductase C9E88_RS12035 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C9E88_RS12035 PF04324 BFD-like [2Fe-2S] binding domain C9E88_RS12040 PF07690 Major Facilitator Superfamily C9E88_RS12050 PF00005 ABC transporter C9E88_RS12055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9E88_RS12055 PF03466 LysR substrate binding domain C9E88_RS12060 PF01494 FAD binding domain C9E88_RS12065 PF03561 Allantoicase repeat C9E88_RS12070 PF04115 Ureidoglycolate lyase C9E88_RS12075 PF00860 Permease family C9E88_RS12080 PF00576 HIUase/Transthyretin family C9E88_RS12095 PF03466 LysR substrate binding domain C9E88_RS12095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9E88_RS12100 PF03788 LrgA family C9E88_RS12105 PF04172 LrgB-like family C9E88_RS12110 PF00892 EamA-like transporter family C9E88_RS12115 PF00390 Malic enzyme, N-terminal domain C9E88_RS12115 PF03949 Malic enzyme, NAD binding domain C9E88_RS12155 PF00501 AMP-binding enzyme C9E88_RS12155 PF13193 AMP-binding enzyme C-terminal domain C9E88_RS12160 PF00392 Bacterial regulatory proteins, gntR family C9E88_RS12160 PF00155 Aminotransferase class I and II C9E88_RS12170 PF07690 Major Facilitator Superfamily C9E88_RS12175 PF03466 LysR substrate binding domain C9E88_RS12175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9E88_RS12180 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain C9E88_RS12180 PF13378 Enolase C-terminal domain-like C9E88_RS12185 PF02426 Muconolactone delta-isomerase C9E88_RS12190 PF04444 Catechol dioxygenase N terminus C9E88_RS12190 PF00775 Dioxygenase C9E88_RS12195 PF00355 Rieske [2Fe-2S] domain C9E88_RS12195 PF00848 Ring hydroxylating alpha subunit (catalytic domain) C9E88_RS12200 PF00866 Ring hydroxylating beta subunit C9E88_RS12205 PF00970 Oxidoreductase FAD-binding domain C9E88_RS12205 PF00111 2Fe-2S iron-sulfur cluster binding domain C9E88_RS12205 PF00175 Oxidoreductase NAD-binding domain C9E88_RS12210 PF00106 short chain dehydrogenase C9E88_RS12215 PF03594 Benzoate membrane transport protein C9E88_RS12220 PF01144 Coenzyme A transferase C9E88_RS12225 PF01144 Coenzyme A transferase C9E88_RS12230 PF02803 Thiolase, C-terminal domain C9E88_RS12230 PF00108 Thiolase, N-terminal domain C9E88_RS12235 PF12146 Serine aminopeptidase, S33 C9E88_RS12240 PF01979 Amidohydrolase family C9E88_RS12245 PF02653 Branched-chain amino acid transport system / permease component C9E88_RS12250 PF02653 Branched-chain amino acid transport system / permease component C9E88_RS12255 PF00005 ABC transporter C9E88_RS12260 PF02608 ABC transporter substrate-binding protein PnrA-like C9E88_RS12265 PF03171 2OG-Fe(II) oxygenase superfamily C9E88_RS12265 PF14226 non-haem dioxygenase in morphine synthesis N-terminal C9E88_RS12270 PF02608 ABC transporter substrate-binding protein PnrA-like C9E88_RS12275 PF14437 MafB19-like deaminase C9E88_RS12280 PF00355 Rieske [2Fe-2S] domain C9E88_RS12285 PF01979 Amidohydrolase family C9E88_RS12295 PF07690 Major Facilitator Superfamily C9E88_RS12310 PF02146 Sir2 family C9E88_RS12320 PF00005 ABC transporter C9E88_RS12335 PF00893 Small Multidrug Resistance protein C9E88_RS12340 PF01925 Sulfite exporter TauE/SafE C9E88_RS12345 PF01613 Flavin reductase like domain C9E88_RS12350 PF01717 Cobalamin-independent synthase, Catalytic domain C9E88_RS12360 PF07992 Pyridine nucleotide-disulphide oxidoreductase C9E88_RS12365 PF02082 Transcriptional regulator C9E88_RS12380 PF00497 Bacterial extracellular solute-binding proteins, family 3 C9E88_RS12390 PF08753 NikR C terminal nickel binding domain C9E88_RS12390 PF01402 Ribbon-helix-helix protein, copG family C9E88_RS12395 PF15887 Putative zinc-binding metallo-peptidase C9E88_RS12395 PF10005 zinc-ribbon domain C9E88_RS12400 PF00881 Nitroreductase family C9E88_RS12410 PF01638 HxlR-like helix-turn-helix C9E88_RS12415 PF00106 short chain dehydrogenase C9E88_RS12445 PF02785 Biotin carboxylase C-terminal domain C9E88_RS12445 PF18140 Propionyl-coenzyme A carboxylase BT domain C9E88_RS12445 PF00289 Biotin carboxylase, N-terminal domain C9E88_RS12445 PF00364 Biotin-requiring enzyme C9E88_RS12445 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C9E88_RS12460 PF02668 Taurine catabolism dioxygenase TauD, TfdA family C9E88_RS12465 PF00528 Binding-protein-dependent transport system inner membrane component C9E88_RS12470 PF00005 ABC transporter C9E88_RS12475 PF04069 Substrate binding domain of ABC-type glycine betaine transport system C9E88_RS12480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9E88_RS12480 PF03466 LysR substrate binding domain C9E88_RS12485 PF13419 Haloacid dehalogenase-like hydrolase C9E88_RS12490 PF00140 Sigma-70 factor, region 1.2 C9E88_RS12490 PF04542 Sigma-70 region 2 C9E88_RS12490 PF04545 Sigma-70, region 4 C9E88_RS12490 PF04539 Sigma-70 region 3 C9E88_RS12495 PF13737 Transposase DDE domain C9E88_RS12500 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain C9E88_RS12500 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain C9E88_RS12505 PF00108 Thiolase, N-terminal domain C9E88_RS12505 PF02803 Thiolase, C-terminal domain C9E88_RS12510 PF02770 Acyl-CoA dehydrogenase, middle domain C9E88_RS12510 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C9E88_RS12510 PF12806 Acetyl-CoA dehydrogenase C-terminal like C9E88_RS12510 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C9E88_RS12515 PF00440 Bacterial regulatory proteins, tetR family C9E88_RS12515 PF08360 QacR-like protein, C-terminal region C9E88_RS12525 PF00376 MerR family regulatory protein C9E88_RS12525 PF09278 MerR, DNA binding C9E88_RS12530 PF00403 Heavy-metal-associated domain C9E88_RS12535 PF00291 Pyridoxal-phosphate dependent enzyme C9E88_RS12545 PF01740 STAS domain C9E88_RS12545 PF00916 Sulfate permease family C9E88_RS12550 PF00375 Sodium:dicarboxylate symporter family C9E88_RS12560 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) C9E88_RS12570 PF00005 ABC transporter C9E88_RS12570 PF00664 ABC transporter transmembrane region C9E88_RS12580 PF12833 Helix-turn-helix domain C9E88_RS12580 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term C9E88_RS12585 PF01597 Glycine cleavage H-protein C9E88_RS12590 PF00437 Type II/IV secretion system protein C9E88_RS12595 PF00793 DAHP synthetase I family C9E88_RS12600 PF00487 Fatty acid desaturase C9E88_RS12605 PF00175 Oxidoreductase NAD-binding domain C9E88_RS12610 PF00107 Zinc-binding dehydrogenase C9E88_RS12610 PF08240 Alcohol dehydrogenase GroES-like domain C9E88_RS12615 PF13091 PLD-like domain C9E88_RS12630 PF00392 Bacterial regulatory proteins, gntR family C9E88_RS12630 PF00155 Aminotransferase class I and II C9E88_RS12635 PF00892 EamA-like transporter family C9E88_RS12660 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C9E88_RS12660 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C9E88_RS12665 PF00106 short chain dehydrogenase C9E88_RS12680 PF02770 Acyl-CoA dehydrogenase, middle domain C9E88_RS12680 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C9E88_RS12680 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C9E88_RS12685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9E88_RS12685 PF03466 LysR substrate binding domain C9E88_RS12690 PF00565 Staphylococcal nuclease homologue C9E88_RS12700 PF07690 Major Facilitator Superfamily C9E88_RS12720 PF03869 Arc-like DNA binding domain C9E88_RS12750 PF01292 Prokaryotic cytochrome b561 C9E88_RS12865 PF07030 Protein of unknown function (DUF1320) C9E88_RS12925 PF00313 'Cold-shock' DNA-binding domain C9E88_RS12935 PF00313 'Cold-shock' DNA-binding domain C9E88_RS13005 PF08299 Bacterial dnaA protein helix-turn-helix C9E88_RS13005 PF00308 Bacterial dnaA protein C9E88_RS13005 PF11638 DnaA N-terminal domain C9E88_RS13030 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT C9E88_RS13035 PF00717 Peptidase S24-like C9E88_RS13045 PF00145 C-5 cytosine-specific DNA methylase C9E88_RS13080 PF00589 Phage integrase family C9E88_RS13080 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain C9E88_RS13095 PF13737 Transposase DDE domain C9E88_RS13100 PF11791 Aconitate B N-terminal domain C9E88_RS13100 PF06434 Aconitate hydratase 2 N-terminus C9E88_RS13100 PF00330 Aconitase family (aconitate hydratase) C9E88_RS13125 PF00717 Peptidase S24-like C9E88_RS13130 PF13438 Domain of unknown function (DUF4113) C9E88_RS13130 PF00817 impB/mucB/samB family C9E88_RS13130 PF11799 impB/mucB/samB family C-terminal domain C9E88_RS13130 PF11798 IMS family HHH motif C9E88_RS13155 PF13742 OB-fold nucleic acid binding domain C9E88_RS13155 PF02601 Exonuclease VII, large subunit C9E88_RS13180 PF01103 Surface antigen C9E88_RS13180 PF07244 Surface antigen variable number repeat C9E88_RS13180 PF17243 POTRA domain TamA domain 1 C9E88_RS13185 PF07690 Major Facilitator Superfamily C9E88_RS13190 PF03232 Ubiquinone biosynthesis protein COQ7 C9E88_RS13205 PF02152 Dihydroneopterin aldolase C9E88_RS13210 PF03109 ABC1 family C9E88_RS13215 PF00899 ThiF family C9E88_RS13220 PF00440 Bacterial regulatory proteins, tetR family C9E88_RS13220 PF13977 BetI-type transcriptional repressor, C-terminal C9E88_RS13225 PF07690 Major Facilitator Superfamily C9E88_RS13230 PF13193 AMP-binding enzyme C-terminal domain C9E88_RS13230 PF00501 AMP-binding enzyme C9E88_RS13235 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C9E88_RS13235 PF02770 Acyl-CoA dehydrogenase, middle domain C9E88_RS13235 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C9E88_RS13240 PF00106 short chain dehydrogenase C9E88_RS13245 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term C9E88_RS13245 PF12833 Helix-turn-helix domain C9E88_RS13255 PF09084 NMT1/THI5 like C9E88_RS13260 PF00528 Binding-protein-dependent transport system inner membrane component C9E88_RS13265 PF17827 PrmC N-terminal domain C9E88_RS13265 PF13847 Methyltransferase domain C9E88_RS13270 PF03462 PCRF domain C9E88_RS13270 PF00472 RF-1 domain C9E88_RS13290 PF00296 Luciferase-like monooxygenase C9E88_RS13300 PF03618 Kinase/pyrophosphorylase C9E88_RS13305 PF02896 PEP-utilising enzyme, TIM barrel domain C9E88_RS13305 PF00391 PEP-utilising enzyme, mobile domain C9E88_RS13305 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain C9E88_RS13315 PF00116 Cytochrome C oxidase subunit II, periplasmic domain C9E88_RS13315 PF06481 COX Aromatic Rich Motif C9E88_RS13320 PF00115 Cytochrome C and Quinol oxidase polypeptide I C9E88_RS13325 PF00510 Cytochrome c oxidase subunit III C9E88_RS13330 PF03626 Prokaryotic Cytochrome C oxidase subunit IV C9E88_RS13335 PF01040 UbiA prenyltransferase family C9E88_RS13350 PF01250 Ribosomal protein S6 C9E88_RS13355 PF01084 Ribosomal protein S18 C9E88_RS13360 PF01281 Ribosomal protein L9, N-terminal domain C9E88_RS13360 PF03948 Ribosomal protein L9, C-terminal domain C9E88_RS13365 PF03796 DnaB-like helicase C terminal domain C9E88_RS13365 PF00772 DnaB-like helicase N terminal domain C9E88_RS13370 PF00842 Alanine racemase, C-terminal domain C9E88_RS13370 PF01168 Alanine racemase, N-terminal domain C9E88_RS13385 PF01841 Transglutaminase-like superfamily C9E88_RS13385 PF08379 Bacterial transglutaminase-like N-terminal region C9E88_RS13395 PF14403 Circularly permuted ATP-grasp type 2 C9E88_RS13405 PF01645 Conserved region in glutamate synthase C9E88_RS13420 PF01565 FAD binding domain C9E88_RS13420 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain C9E88_RS13425 PF01451 Low molecular weight phosphotyrosine protein phosphatase C9E88_RS13430 PF00465 Iron-containing alcohol dehydrogenase C9E88_RS13440 PF03061 Thioesterase superfamily C9E88_RS13445 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding C9E88_RS13445 PF12169 DNA polymerase III subunits gamma and tau domain III C9E88_RS13445 PF12170 DNA polymerase III tau subunit V interacting with alpha C9E88_RS13475 PF00108 Thiolase, N-terminal domain C9E88_RS13475 PF02803 Thiolase, C-terminal domain C9E88_RS13485 PF03466 LysR substrate binding domain C9E88_RS13485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9E88_RS13490 PF00923 Transaldolase/Fructose-6-phosphate aldolase C9E88_RS13495 PF01810 LysE type translocator C9E88_RS13500 PF00440 Bacterial regulatory proteins, tetR family C9E88_RS13500 PF08361 MAATS-type transcriptional repressor, C-terminal region C9E88_RS13505 PF00893 Small Multidrug Resistance protein C9E88_RS13515 PF00582 Universal stress protein family C9E88_RS13520 PF00582 Universal stress protein family C9E88_RS13535 PF17432 Domain of unknown function (DUF3458_C) ARM repeats C9E88_RS13535 PF11940 Domain of unknown function (DUF3458) Ig-like fold C9E88_RS13535 PF01433 Peptidase family M1 domain C9E88_RS13550 PF02110 Hydroxyethylthiazole kinase family C9E88_RS13565 PF03741 Integral membrane protein TerC family C9E88_RS13565 PF03471 Transporter associated domain C9E88_RS13595 PF01274 Malate synthase C9E88_RS13600 PF03969 AFG1-like ATPase C9E88_RS13610 PF00743 Flavin-binding monooxygenase-like C9E88_RS13615 PF03956 Lysine exporter LysO C9E88_RS13625 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family C9E88_RS13635 PF00216 Bacterial DNA-binding protein C9E88_RS13640 PF00575 S1 RNA binding domain C9E88_RS13645 PF02224 Cytidylate kinase C9E88_RS13655 PF14437 MafB19-like deaminase C9E88_RS13665 PF03167 Uracil DNA glycosylase superfamily C9E88_RS13675 PF03934 Type II secretion system (T2SS), protein K C9E88_RS13680 PF07963 Prokaryotic N-terminal methylation motif C9E88_RS13680 PF11612 Type II secretion system (T2SS), protein J C9E88_RS13685 PF07963 Prokaryotic N-terminal methylation motif C9E88_RS13685 PF02501 Type II secretion system (T2SS), protein I C9E88_RS13690 PF08334 Type II secretion system (T2SS), protein G C9E88_RS13690 PF07963 Prokaryotic N-terminal methylation motif C9E88_RS13700 PF01026 TatD related DNase C9E88_RS13710 PF09115 DNA polymerase III, delta subunit, C terminal C9E88_RS13715 PF02348 Cytidylyltransferase C9E88_RS13720 PF02606 Tetraacyldisaccharide-1-P 4'-kinase C9E88_RS13725 PF00664 ABC transporter transmembrane region C9E88_RS13725 PF00005 ABC transporter C9E88_RS13735 PF01618 MotA/TolQ/ExbB proton channel family C9E88_RS13740 PF17762 HTH domain found in ParB protein C9E88_RS13740 PF02195 ParB-like nuclease domain C9E88_RS13745 PF13614 AAA domain C9E88_RS13750 PF02527 rRNA small subunit methyltransferase G C9E88_RS13755 PF00483 Nucleotidyl transferase C9E88_RS13760 PF01636 Phosphotransferase enzyme family C9E88_RS13765 PF04453 LPS transport system D C9E88_RS13765 PF03968 OstA-like protein C9E88_RS13770 PF00639 PPIC-type PPIASE domain C9E88_RS13770 PF09312 SurA N-terminal domain C9E88_RS13775 PF17209 Hfq protein C9E88_RS13785 PF08676 MutL C terminal dimerisation domain C9E88_RS13785 PF01119 DNA mismatch repair protein, C-terminal domain C9E88_RS13790 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE C9E88_RS13795 PF00849 RNA pseudouridylate synthase C9E88_RS13810 PF01479 S4 domain C9E88_RS13810 PF00849 RNA pseudouridylate synthase C9E88_RS13815 PF04284 Protein of unknown function (DUF441) C9E88_RS13830 PF05970 PIF1-like helicase C9E88_RS13830 PF14493 Helix-turn-helix domain C9E88_RS13845 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C9E88_RS13845 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C9E88_RS13850 PF00271 Helicase conserved C-terminal domain C9E88_RS13850 PF00270 DEAD/DEAH box helicase C9E88_RS13850 PF11898 Domain of unknown function (DUF3418) C9E88_RS13850 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold C9E88_RS13850 PF04408 Helicase associated domain (HA2) C9E88_RS13855 PF00578 AhpC/TSA family C9E88_RS13855 PF10417 C-terminal domain of 1-Cys peroxiredoxin C9E88_RS13875 PF07992 Pyridine nucleotide-disulphide oxidoreductase C9E88_RS13875 PF13192 Thioredoxin domain C9E88_RS13890 PF01810 LysE type translocator C9E88_RS13900 PF02075 Crossover junction endodeoxyribonuclease RuvC C9E88_RS13905 PF00708 Acylphosphatase C9E88_RS13910 PF01256 Carbohydrate kinase C9E88_RS13910 PF03853 YjeF-related protein N-terminus C9E88_RS13915 PF08331 Domain of unknown function (DUF1730) C9E88_RS13920 PF06968 Biotin and Thiamin Synthesis associated domain C9E88_RS13920 PF04055 Radical SAM superfamily C9E88_RS13940 PF03441 FAD binding domain of DNA photolyase C9E88_RS13940 PF00875 DNA photolyase C9E88_RS13975 PF13737 Transposase DDE domain C9E88_RS13985 PF01553 Acyltransferase C9E88_RS13990 PF01709 Transcriptional regulator C9E88_RS14010 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C9E88_RS14010 PF08028 Acyl-CoA dehydrogenase, C-terminal domain C9E88_RS14020 PF00296 Luciferase-like monooxygenase C9E88_RS14035 PF00528 Binding-protein-dependent transport system inner membrane component C9E88_RS14040 PF06071 Protein of unknown function (DUF933) C9E88_RS14040 PF01926 50S ribosome-binding GTPase C9E88_RS14060 PF00027 Cyclic nucleotide-binding domain C9E88_RS14060 PF13545 Crp-like helix-turn-helix domain C9E88_RS14070 PF03591 AzlC protein C9E88_RS14080 PF02222 ATP-grasp domain C9E88_RS14085 PF01966 HD domain C9E88_RS14085 PF08335 GlnD PII-uridylyltransferase C9E88_RS14085 PF01909 Nucleotidyltransferase domain C9E88_RS14090 PF00155 Aminotransferase class I and II C9E88_RS14105 PF00255 Glutathione peroxidase C9E88_RS14110 PF01641 SelR domain C9E88_RS14115 PF00155 Aminotransferase class I and II C9E88_RS14120 PF00849 RNA pseudouridylate synthase C9E88_RS14135 PF00768 D-alanyl-D-alanine carboxypeptidase C9E88_RS14135 PF07943 Penicillin-binding protein 5, C-terminal domain C9E88_RS14140 PF07992 Pyridine nucleotide-disulphide oxidoreductase C9E88_RS14145 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C9E88_RS14160 PF01435 Peptidase family M48 C9E88_RS14165 PF00709 Adenylosuccinate synthetase C9E88_RS14170 PF13393 Histidyl-tRNA synthetase C9E88_RS14180 PF03591 AzlC protein C9E88_RS14195 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C9E88_RS14195 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C9E88_RS14200 PF01411 tRNA synthetases class II (A) C9E88_RS14200 PF02272 DHHA1 domain C9E88_RS14200 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C9E88_RS14205 PF01842 ACT domain C9E88_RS14205 PF13840 ACT domain C9E88_RS14205 PF00696 Amino acid kinase family C9E88_RS14210 PF02599 Global regulator protein family C9E88_RS14215 PF01351 Ribonuclease HII C9E88_RS14250 PF00860 Permease family C9E88_RS14255 PF03883 Peroxide stress protein YaaA C9E88_RS14275 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C9E88_RS14280 PF00155 Aminotransferase class I and II C9E88_RS14285 PF01817 Chorismate mutase type II C9E88_RS14285 PF00800 Prephenate dehydratase C9E88_RS14285 PF01842 ACT domain C9E88_RS14290 PF01965 DJ-1/PfpI family C9E88_RS14295 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C9E88_RS14295 PF02770 Acyl-CoA dehydrogenase, middle domain C9E88_RS14295 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C9E88_RS14300 PF00375 Sodium:dicarboxylate symporter family C9E88_RS14305 PF02885 Glycosyl transferase family, helical bundle domain C9E88_RS14305 PF00591 Glycosyl transferase family, a/b domain C9E88_RS14310 PF07023 Protein of unknown function (DUF1315) C9E88_RS14315 PF01513 ATP-NAD kinase C9E88_RS14320 PF00905 Penicillin binding protein transpeptidase domain C9E88_RS14320 PF14814 Bifunctional transglycosylase second domain C9E88_RS14320 PF00912 Transglycosylase C9E88_RS14330 PF00293 NUDIX domain C9E88_RS14340 PF08521 Two-component sensor kinase N-terminal C9E88_RS14340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9E88_RS14340 PF00512 His Kinase A (phospho-acceptor) domain C9E88_RS14345 PF00486 Transcriptional regulatory protein, C terminal C9E88_RS14345 PF00072 Response regulator receiver domain C9E88_RS14355 PF00437 Type II/IV secretion system protein C9E88_RS14355 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain C9E88_RS14365 PF18389 TrmO C-terminal domain C9E88_RS14365 PF01980 tRNA-methyltransferase O C9E88_RS14370 PF00175 Oxidoreductase NAD-binding domain C9E88_RS14370 PF00970 Oxidoreductase FAD-binding domain C9E88_RS14405 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) C9E88_RS14405 PF13296 Putative type VI secretion system Rhs element Vgr C9E88_RS14405 PF04717 Type VI secretion system, phage-baseplate injector C9E88_RS14415 PF13411 MerR HTH family regulatory protein C9E88_RS14420 PF03358 NADPH-dependent FMN reductase C9E88_RS14425 PF01758 Sodium Bile acid symporter family C9E88_RS14430 PF01451 Low molecular weight phosphotyrosine protein phosphatase C9E88_RS14435 PF01022 Bacterial regulatory protein, arsR family C9E88_RS14440 PF16325 Peptidase family U32 C-terminal domain C9E88_RS14440 PF01136 Peptidase family U32 C9E88_RS14445 PF12838 4Fe-4S dicluster domain C9E88_RS14450 PF07992 Pyridine nucleotide-disulphide oxidoreductase C9E88_RS14450 PF13192 Thioredoxin domain C9E88_RS14460 PF05816 Toxic anion resistance protein (TelA) C9E88_RS14475 PF14760 Rnk N-terminus C9E88_RS14475 PF01272 Transcription elongation factor, GreA/GreB, C-term C9E88_RS14480 PF00464 Serine hydroxymethyltransferase C9E88_RS14510 PF00132 Bacterial transferase hexapeptide (six repeats) C9E88_RS14510 PF14602 Hexapeptide repeat of succinyl-transferase C9E88_RS14510 PF12804 MobA-like NTP transferase domain C9E88_RS14515 PF02661 Fic/DOC family C9E88_RS14515 PF13784 Fic/DOC family N-terminal C9E88_RS14525 PF03358 NADPH-dependent FMN reductase C9E88_RS14530 PF01758 Sodium Bile acid symporter family C9E88_RS14540 PF01022 Bacterial regulatory protein, arsR family C9E88_RS14555 PF03960 ArsC family C9E88_RS14570 PF00581 Rhodanese-like domain C9E88_RS14575 PF01925 Sulfite exporter TauE/SafE C9E88_RS14580 PF00753 Metallo-beta-lactamase superfamily C9E88_RS14590 PF04143 Sulphur transport C9E88_RS14600 PF00005 ABC transporter C9E88_RS14605 PF12704 MacB-like periplasmic core domain C9E88_RS14605 PF02687 FtsX-like permease family C9E88_RS14610 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C9E88_RS14615 PF13784 Fic/DOC family N-terminal C9E88_RS14615 PF02661 Fic/DOC family C9E88_RS14650 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C9E88_RS14650 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C9E88_RS14655 PF12631 MnmE helical domain C9E88_RS14655 PF10396 GTP-binding protein TrmE N-terminus C9E88_RS14655 PF01926 50S ribosome-binding GTPase C9E88_RS14685 PF13784 Fic/DOC family N-terminal C9E88_RS14685 PF02661 Fic/DOC family C9E88_RS14730 PF13737 Transposase DDE domain C9E88_RS14745 PF00589 Phage integrase family C9E88_RS14745 PF13356 Arm DNA-binding domain C9E88_RS14755 PF00005 ABC transporter C9E88_RS14760 PF01061 ABC-2 type transporter C9E88_RS14765 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term C9E88_RS14765 PF14489 QueF-like protein C9E88_RS14780 PF13406 Transglycosylase SLT domain C9E88_RS14785 PF05036 Sporulation related domain C9E88_RS14785 PF03330 Lytic transglycolase C9E88_RS14815 PF00889 Elongation factor TS C9E88_RS14820 PF00318 Ribosomal protein S2 C9E88_RS14825 PF00557 Metallopeptidase family M24 C9E88_RS14830 PF00155 Aminotransferase class I and II C9E88_RS14855 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) C9E88_RS14860 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ C9E88_RS14865 PF02565 Recombination protein O C terminal C9E88_RS14865 PF11967 Recombination protein O N terminal C9E88_RS14875 PF01926 50S ribosome-binding GTPase C9E88_RS14875 PF07650 KH domain C9E88_RS14880 PF14622 Ribonuclease-III-like C9E88_RS14880 PF00035 Double-stranded RNA binding motif C9E88_RS14890 PF10502 Signal peptidase, peptidase S26 C9E88_RS14895 PF03144 Elongation factor Tu domain 2 C9E88_RS14895 PF00679 Elongation factor G C-terminus C9E88_RS14895 PF06421 GTP-binding protein LepA C-terminus C9E88_RS14895 PF00009 Elongation factor Tu GTP binding domain C9E88_RS14905 PF13180 PDZ domain C9E88_RS14910 PF00890 FAD binding domain C9E88_RS14910 PF02910 Fumarate reductase flavoprotein C-term C9E88_RS14930 PF02223 Thymidylate kinase C9E88_RS14935 PF02618 YceG-like family C9E88_RS14940 PF01063 Amino-transferase class IV C9E88_RS14960 PF00528 Binding-protein-dependent transport system inner membrane component C9E88_RS14965 PF00528 Binding-protein-dependent transport system inner membrane component C9E88_RS14970 PF00005 ABC transporter C9E88_RS14970 PF12857 TOBE-like domain C9E88_RS14975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9E88_RS14975 PF03466 LysR substrate binding domain C9E88_RS14990 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal C9E88_RS14990 PF00132 Bacterial transferase hexapeptide (six repeats) C9E88_RS14990 PF14602 Hexapeptide repeat of succinyl-transferase C9E88_RS14995 PF04055 Radical SAM superfamily C9E88_RS15000 PF06508 Queuosine biosynthesis protein QueC C9E88_RS15010 PF00578 AhpC/TSA family C9E88_RS15015 PF01810 LysE type translocator C9E88_RS15020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9E88_RS15020 PF03466 LysR substrate binding domain C9E88_RS15025 PF04264 YceI-like domain C9E88_RS15030 PF00293 NUDIX domain C9E88_RS15030 PF01467 Cytidylyltransferase-like C9E88_RS15035 PF00378 Enoyl-CoA hydratase/isomerase C9E88_RS15040 PF00881 Nitroreductase family C9E88_RS15045 PF01784 NIF3 (NGG1p interacting factor 3) C9E88_RS15070 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal C9E88_RS15070 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain C9E88_RS15070 PF02769 AIR synthase related protein, C-terminal domain C9E88_RS15075 PF04389 Peptidase family M28 C9E88_RS15075 PF01483 Proprotein convertase P-domain C9E88_RS15080 PF00884 Sulfatase C9E88_RS15085 PF01966 HD domain C9E88_RS15095 PF01330 RuvA N terminal domain C9E88_RS15095 PF07499 RuvA, C-terminal domain C9E88_RS15100 PF05496 Holliday junction DNA helicase RuvB P-loop domain C9E88_RS15100 PF17864 RuvB AAA lid domain C9E88_RS15100 PF05491 RuvB C-terminal winged helix domain C9E88_RS15110 PF03061 Thioesterase superfamily C9E88_RS15115 PF01618 MotA/TolQ/ExbB proton channel family C9E88_RS15120 PF02472 Biopolymer transport protein ExbD/TolR C9E88_RS15130 PF04052 TolB amino-terminal domain C9E88_RS15130 PF07676 WD40-like Beta Propeller Repeat C9E88_RS15135 PF00691 OmpA family C9E88_RS15145 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain C9E88_RS15150 PF00588 SpoU rRNA Methylase family C9E88_RS15150 PF08032 RNA 2'-O ribose methyltransferase substrate binding C9E88_RS15180 PF00308 Bacterial dnaA protein C9E88_RS15180 PF08299 Bacterial dnaA protein helix-turn-helix C9E88_RS15180 PF11638 DnaA N-terminal domain C9E88_RS15185 PF01594 AI-2E family transporter C9E88_RS15190 PF02769 AIR synthase related protein, C-terminal domain C9E88_RS15190 PF00586 AIR synthase related protein, N-terminal domain C9E88_RS15195 PF00551 Formyl transferase C9E88_RS15205 PF01343 Peptidase family S49 C9E88_RS15205 PF06965 Na+/H+ antiporter 1 C9E88_RS15215 PF00753 Metallo-beta-lactamase superfamily C9E88_RS15215 PF13567 Domain of unknown function (DUF4131) C9E88_RS15215 PF03772 Competence protein C9E88_RS15220 PF00005 ABC transporter C9E88_RS15225 PF02687 FtsX-like permease family C9E88_RS15225 PF12704 MacB-like periplasmic core domain C9E88_RS15240 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 C9E88_RS15250 PF00266 Aminotransferase class-V C9E88_RS15260 PF13533 Biotin-lipoyl like C9E88_RS15275 PF00375 Sodium:dicarboxylate symporter family C9E88_RS15290 PF00521 DNA gyrase/topoisomerase IV, subunit A C9E88_RS15290 PF03989 DNA gyrase C-terminal domain, beta-propeller C9E88_RS15295 PF00766 Electron transfer flavoprotein FAD-binding domain C9E88_RS15295 PF01012 Electron transfer flavoprotein domain C9E88_RS15300 PF01012 Electron transfer flavoprotein domain C9E88_RS15305 PF01810 LysE type translocator C9E88_RS15310 PF01037 Lrp/AsnC ligand binding domain C9E88_RS15320 PF01425 Amidase C9E88_RS15325 PF02899 Phage integrase, N-terminal SAM-like domain C9E88_RS15325 PF00589 Phage integrase family C9E88_RS15335 PF01678 Diaminopimelate epimerase C9E88_RS15340 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C9E88_RS15340 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C9E88_RS15370 PF10145 Phage-related minor tail protein C9E88_RS15370 PF01464 Transglycosylase SLT domain C9E88_RS15370 PF01551 Peptidase family M23 C9E88_RS15385 PF01464 Transglycosylase SLT domain C9E88_RS15385 PF10145 Phage-related minor tail protein C9E88_RS15385 PF01551 Peptidase family M23 C9E88_RS15400 PF00437 Type II/IV secretion system protein C9E88_RS15405 PF03743 Bacterial conjugation TrbI-like protein C9E88_RS15450 PF13614 AAA domain C9E88_RS15520 PF03389 MobA/MobL family C9E88_RS15520 PF17841 BID domain of Bartonella effector protein (Bep) C9E88_RS15520 PF01443 Viral (Superfamily 1) RNA helicase C9E88_RS15545 PF01636 Phosphotransferase enzyme family C9E88_RS15550 PF13936 Helix-turn-helix domain C9E88_RS15550 PF00665 Integrase core domain C9E88_RS15555 PF00753 Metallo-beta-lactamase superfamily C9E88_RS15565 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase C9E88_RS15570 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C9E88_RS15575 PF03091 CutA1 divalent ion tolerance protein C9E88_RS15580 PF00166 Chaperonin 10 Kd subunit C9E88_RS15585 PF00118 TCP-1/cpn60 chaperonin family C9E88_RS15605 PF00665 Integrase core domain C9E88_RS15605 PF13936 Helix-turn-helix domain C9E88_RS15610 PF00239 Resolvase, N terminal domain C9E88_RS15610 PF02796 Helix-turn-helix domain of resolvase C9E88_RS15625 PF00565 Staphylococcal nuclease homologue C9E88_RS15640 PF02142 MGS-like domain C9E88_RS15640 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C9E88_RS15640 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C9E88_RS15645 PF01272 Transcription elongation factor, GreA/GreB, C-term C9E88_RS15645 PF03449 Transcription elongation factor, N-terminal C9E88_RS15650 PF04072 Leucine carboxyl methyltransferase C9E88_RS15655 PF00132 Bacterial transferase hexapeptide (six repeats) C9E88_RS15675 PF00037 4Fe-4S binding domain C9E88_RS15680 PF01467 Cytidylyltransferase-like C9E88_RS15685 PF01668 SmpB protein C9E88_RS15700 PF02578 Multi-copper polyphenol oxidoreductase laccase C9E88_RS15705 PF00849 RNA pseudouridylate synthase C9E88_RS15705 PF01479 S4 domain C9E88_RS15710 PF13525 Outer membrane lipoprotein C9E88_RS15715 PF08275 DNA primase catalytic core, N-terminal domain C9E88_RS15715 PF08278 DNA primase DnaG DnaB-binding C9E88_RS15715 PF10410 DnaB-helicase binding domain of primase C9E88_RS15715 PF01807 CHC2 zinc finger C9E88_RS15720 PF01488 Shikimate / quinate 5-dehydrogenase C9E88_RS15720 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain C9E88_RS15720 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain C9E88_RS15730 PF03550 Outer membrane lipoprotein LolB C9E88_RS15735 PF08544 GHMP kinases C terminal C9E88_RS15735 PF00288 GHMP kinases N terminal domain C9E88_RS15760 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase C9E88_RS15760 PF14572 Phosphoribosyl synthetase-associated domain C9E88_RS15765 PF01386 Ribosomal L25p family C9E88_RS15770 PF01195 Peptidyl-tRNA hydrolase C9E88_RS15775 PF02261 Aspartate decarboxylase C9E88_RS15790 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase C9E88_RS15815 PF17773 UPF0176 acylphosphatase like domain C9E88_RS15815 PF00581 Rhodanese-like domain C9E88_RS15820 PF09335 SNARE associated Golgi protein C9E88_RS15840 PF00140 Sigma-70 factor, region 1.2 C9E88_RS15840 PF04546 Sigma-70, non-essential region C9E88_RS15840 PF04542 Sigma-70 region 2 C9E88_RS15840 PF03979 Sigma-70 factor, region 1.1 C9E88_RS15840 PF04545 Sigma-70, region 4 C9E88_RS15840 PF04539 Sigma-70 region 3 C9E88_RS15845 PF04359 Protein of unknown function (DUF493) C9E88_RS15850 PF03099 Biotin/lipoate A/B protein ligase family C9E88_RS15860 PF00465 Iron-containing alcohol dehydrogenase C9E88_RS15865 PF13520 Amino acid permease C9E88_RS15875 PF00588 SpoU rRNA Methylase family C9E88_RS15880 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C9E88_RS15880 PF10414 Sirohaem synthase dimerisation region C9E88_RS15880 PF14824 Sirohaem biosynthesis protein central C9E88_RS15885 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C9E88_RS15885 PF02403 Seryl-tRNA synthetase N-terminal domain C9E88_RS15895 PF03548 Outer membrane lipoprotein carrier protein LolA C9E88_RS15900 PF01016 Ribosomal L27 protein C9E88_RS15905 PF00829 Ribosomal prokaryotic L21 protein C9E88_RS15910 PF00348 Polyprenyl synthetase C9E88_RS15920 PF01569 PAP2 superfamily C9E88_RS15925 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C9E88_RS15925 PF00529 HlyD membrane-fusion protein of T1SS C9E88_RS15930 PF00873 AcrB/AcrD/AcrF family C9E88_RS15935 PF02321 Outer membrane efflux protein C9E88_RS15940 PF01906 Putative heavy-metal-binding C9E88_RS15945 PF01906 Putative heavy-metal-binding C9E88_RS15965 PF10458 Valyl tRNA synthetase tRNA binding arm C9E88_RS15965 PF08264 Anticodon-binding domain of tRNA C9E88_RS15965 PF00133 tRNA synthetases class I (I, L, M and V) C9E88_RS15970 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) C9E88_RS15990 PF08448 PAS fold C9E88_RS15990 PF00990 Diguanylate cyclase, GGDEF domain C9E88_RS15995 PF00497 Bacterial extracellular solute-binding proteins, family 3 C9E88_RS16000 PF00528 Binding-protein-dependent transport system inner membrane component C9E88_RS16005 PF00528 Binding-protein-dependent transport system inner membrane component C9E88_RS16010 PF00005 ABC transporter C9E88_RS16015 PF00909 Ammonium Transporter Family C9E88_RS16030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9E88_RS16030 PF08521 Two-component sensor kinase N-terminal C9E88_RS16030 PF00512 His Kinase A (phospho-acceptor) domain C9E88_RS16035 PF00072 Response regulator receiver domain C9E88_RS16035 PF00486 Transcriptional regulatory protein, C terminal C9E88_RS16040 PF08019 Phosphoethanolamine transferase EptA/EptB C9E88_RS16040 PF00884 Sulfatase C9E88_RS16055 PF01734 Patatin-like phospholipase C9E88_RS16065 PF01145 SPFH domain / Band 7 family C9E88_RS16070 PF00474 Sodium:solute symporter family C9E88_RS16075 PF00348 Polyprenyl synthetase C9E88_RS16080 PF04303 PrpF protein C9E88_RS16085 PF00324 Amino acid permease C9E88_RS16115 PF01507 Phosphoadenosine phosphosulfate reductase family C9E88_RS16120 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain C9E88_RS16120 PF06974 Protein of unknown function (DUF1298) C9E88_RS16125 PF00575 S1 RNA binding domain C9E88_RS16125 PF10150 Ribonuclease E/G family C9E88_RS16130 PF02545 Maf-like protein C9E88_RS16135 PF04093 rod shape-determining protein MreD C9E88_RS16140 PF04085 rod shape-determining protein MreC C9E88_RS16150 PF02686 Glu-tRNAGln amidotransferase C subunit C9E88_RS16155 PF01425 Amidase C9E88_RS16160 PF02934 GatB/GatE catalytic domain C9E88_RS16160 PF02637 GatB domain C9E88_RS16190 PF05992 SbmA/BacA-like family C9E88_RS16230 PF01235 Sodium:alanine symporter family C9E88_RS16240 PF18073 Rubredoxin metal binding domain C9E88_RS16250 PF08238 Sel1 repeat C9E88_RS16265 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain C9E88_RS16265 PF05221 S-adenosyl-L-homocysteine hydrolase C9E88_RS16270 PF02219 Methylenetetrahydrofolate reductase C9E88_RS16275 PF04452 RNA methyltransferase C9E88_RS16280 PF00498 FHA domain C9E88_RS16280 PF00563 EAL domain C9E88_RS16280 PF00990 Diguanylate cyclase, GGDEF domain C9E88_RS16285 PF00390 Malic enzyme, N-terminal domain C9E88_RS16285 PF01515 Phosphate acetyl/butaryl transferase C9E88_RS16285 PF03949 Malic enzyme, NAD binding domain C9E88_RS16290 PF12627 Probable RNA and SrmB- binding site of polymerase A C9E88_RS16290 PF01743 Poly A polymerase head domain C9E88_RS16300 PF00152 tRNA synthetases class II (D, K and N) C9E88_RS16305 PF11890 Domain of unknown function (DUF3410) C9E88_RS16305 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C9E88_RS16305 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C9E88_RS16310 PF00596 Class II Aldolase and Adducin N-terminal domain C9E88_RS16325 PF03449 Transcription elongation factor, N-terminal C9E88_RS16325 PF01272 Transcription elongation factor, GreA/GreB, C-term C9E88_RS16330 PF03466 LysR substrate binding domain C9E88_RS16330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9E88_RS16340 PF01464 Transglycosylase SLT domain C9E88_RS16340 PF00497 Bacterial extracellular solute-binding proteins, family 3 C9E88_RS16350 PF01171 PP-loop family C9E88_RS16355 PF01551 Peptidase family M23 C9E88_RS16355 PF10145 Phage-related minor tail protein C9E88_RS16355 PF01464 Transglycosylase SLT domain C9E88_RS16360 PF01435 Peptidase family M48 C9E88_RS16370 PF01769 Divalent cation transporter C9E88_RS16370 PF03448 MgtE intracellular N domain C9E88_RS16370 PF00571 CBS domain C9E88_RS16375 PF00873 AcrB/AcrD/AcrF family C9E88_RS16390 PF01219 Prokaryotic diacylglycerol kinase C9E88_RS16395 PF00463 Isocitrate lyase family C9E88_RS16400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9E88_RS16400 PF03466 LysR substrate binding domain C9E88_RS16405 PF00571 CBS domain C9E88_RS16405 PF03471 Transporter associated domain C9E88_RS16405 PF01595 Cyclin M transmembrane N-terminal domain C9E88_RS16415 PF03600 Citrate transporter C9E88_RS16430 PF16655 PhoD-like phosphatase, N-terminal domain C9E88_RS16430 PF09423 PhoD-like phosphatase C9E88_RS16445 PF00809 Pterin binding enzyme C9E88_RS16450 PF01434 Peptidase family M41 C9E88_RS16450 PF06480 FtsH Extracellular C9E88_RS16450 PF17862 AAA+ lid domain C9E88_RS16450 PF00004 ATPase family associated with various cellular activities (AAA) C9E88_RS16455 PF01728 FtsJ-like methyltransferase C9E88_RS16460 PF01985 CRS1 / YhbY (CRM) domain C9E88_RS16475 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain C9E88_RS16475 PF00117 Glutamine amidotransferase class-I C9E88_RS16480 PF13737 Transposase DDE domain C9E88_RS16485 PF01636 Phosphotransferase enzyme family C9E88_RS16490 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase C9E88_RS16500 PF05973 Phage derived protein Gp49-like (DUF891) C9E88_RS16515 PF00239 Resolvase, N terminal domain C9E88_RS16515 PF02796 Helix-turn-helix domain of resolvase C9E88_RS16520 PF01636 Phosphotransferase enzyme family C9E88_RS16525 PF00005 ABC transporter C9E88_RS16525 PF12848 ABC transporter C9E88_RS16540 PF00440 Bacterial regulatory proteins, tetR family C9E88_RS16540 PF02909 Tetracyclin repressor-like, C-terminal domain C9E88_RS16545 PF07690 Major Facilitator Superfamily C9E88_RS16555 PF01051 Initiator Replication protein C9E88_RS16565 PF17841 BID domain of Bartonella effector protein (Bep) C9E88_RS16565 PF03389 MobA/MobL family C9E88_RS16565 PF01443 Viral (Superfamily 1) RNA helicase C9E88_RS16590 PF00809 Pterin binding enzyme C9E88_RS16595 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C9E88_RS16595 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C9E88_RS16595 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C9E88_RS16595 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C9E88_RS16600 PF08463 EcoEI R protein C-terminal C9E88_RS16600 PF00271 Helicase conserved C-terminal domain C9E88_RS16600 PF04851 Type III restriction enzyme, res subunit C9E88_RS16600 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) C9E88_RS16610 PF13614 AAA domain C9E88_RS16615 PF00717 Peptidase S24-like C9E88_RS16615 PF01726 LexA DNA binding domain C9E88_RS16630 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system C9E88_RS16640 PF02909 Tetracyclin repressor-like, C-terminal domain C9E88_RS16640 PF00440 Bacterial regulatory proteins, tetR family C9E88_RS16645 PF07690 Major Facilitator Superfamily C9E88_RS16655 PF01051 Initiator Replication protein C9E88_RS16675 PF16793 RepB DNA-primase from phage plasmid C9E88_RS16675 PF03389 MobA/MobL family C9E88_RS16685 PF01051 Initiator Replication protein C9E88_RS16725 PF01076 Plasmid recombination enzyme