locus-tag	class	description
TQ29_RS00025	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
TQ29_RS00030	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
TQ29_RS00055	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
TQ29_RS00065	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
TQ29_RS00070	COG1999	signal sequence binding
TQ29_RS00080	COG2205	protein histidine kinase activity
TQ29_RS00085	COG0802	atpase or kinase
TQ29_RS00090	COG3178	'Phosphotransferase
TQ29_RS00095	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
TQ29_RS00100	COG2887	Belongs to the helicase family. UvrD subfamily
TQ29_RS00105	COG1074	ATP-dependent DNA helicase activity
TQ29_RS00120	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
TQ29_RS00125	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
TQ29_RS00150	COG3030	protein affecting phage T7 exclusion by the F plasmid
TQ29_RS00165	COG0237	dephospho-CoA kinase activity
TQ29_RS00170	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
TQ29_RS00175	COG0424	maF-like protein
TQ29_RS00180	COG1981	membrane
TQ29_RS00185	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
TQ29_RS00190	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
TQ29_RS00195	COG0445	tRNA wobble uridine modification
TQ29_RS00200	COG0357	Ribosomal RNA small subunit methyltransferase G
TQ29_RS00220	COG0635	Involved in the biosynthesis of porphyrin-containing compound
TQ29_RS00225	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
TQ29_RS00230	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
TQ29_RS00235	COG1420	regulation of RNA biosynthetic process
TQ29_RS00240	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
TQ29_RS00245	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
TQ29_RS00250	COG0280	phosphate acetyltransferase
TQ29_RS00250	COG0281	malic enzyme
TQ29_RS00255	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
TQ29_RS00260	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
TQ29_RS00270	COG0137	argininosuccinate synthase activity
TQ29_RS00300	COG0617	tRNA 3'-terminal CCA addition
TQ29_RS00305	COG1132	(ABC) transporter
TQ29_RS00310	COG1132	(ABC) transporter
TQ29_RS00320	COG3034	peptidoglycan biosynthetic process
TQ29_RS00350	COG1040	competence protein
TQ29_RS00360	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
TQ29_RS00370	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
TQ29_RS00380	COG0779	Required for maturation of 30S ribosomal subunits
TQ29_RS00395	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
TQ29_RS00400	COG0494	nUDIX hydrolase
TQ29_RS00405	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
TQ29_RS00410	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
TQ29_RS00415	COG0653	protein targeting
TQ29_RS00430	COG2003	Belongs to the UPF0758 family
TQ29_RS00440	COG0443	Heat shock 70 kDa protein
TQ29_RS00460	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
TQ29_RS00475	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
TQ29_RS00500	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
TQ29_RS00505	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
TQ29_RS00510	COG1137	ATPase activity
TQ29_RS00530	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
TQ29_RS00540	COG0745	RESPONSE REGULATOR receiver
TQ29_RS00575	COG1231	oxidoreductase activity
TQ29_RS00585	COG1764	response to oxidative stress
TQ29_RS00590	COG1846	Transcriptional regulator
TQ29_RS00595	COG1064	alcohol dehydrogenase
TQ29_RS00615	COG1968	undecaprenyl-diphosphatase activity
TQ29_RS00640	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
TQ29_RS00645	COG0625	glutathione transferase activity
TQ29_RS00650	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
TQ29_RS00680	COG0489	protein tyrosine kinase activity
TQ29_RS00690	COG3267	Type II secretory pathway component ExeA
TQ29_RS00690	COG3409	Peptidoglycan-binding domain 1 protein
TQ29_RS00725	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
TQ29_RS00730	COG0297	glycogen (starch) synthase activity
TQ29_RS00780	COG4191	Histidine kinase
TQ29_RS00785	COG1360	Flagellar Motor Protein
TQ29_RS00805	COG1706	bacterial-type flagellum-dependent cell motility
TQ29_RS00810	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
TQ29_RS00815	COG1338	Plays a role in the flagellum-specific transport system
TQ29_RS00820	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
TQ29_RS00830	COG1766	The M ring may be actively involved in energy transduction
TQ29_RS00850	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
TQ29_RS00865	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
TQ29_RS00890	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
TQ29_RS00900	COG4786	Flagellar basal body rod
TQ29_RS00905	COG4786	Flagellar basal body rod
TQ29_RS00910	COG1987	bacterial-type flagellum assembly
TQ29_RS00915	COG1677	Flagellar hook-basal body complex protein FliE
TQ29_RS00920	COG1558	bacterial-type flagellum-dependent cell motility
TQ29_RS00925	COG1815	bacterial-type flagellum-dependent cell motility
TQ29_RS00940	COG5443	negative regulation of bacterial-type flagellum assembly
TQ29_RS00970	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
TQ29_RS00980	COG2226	methyltransferase
TQ29_RS00985	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
TQ29_RS00995	COG0268	Binds directly to 16S ribosomal RNA
TQ29_RS01010	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
TQ29_RS01020	COG1280	lysine exporter protein (LysE YggA)
TQ29_RS01030	COG1054	Belongs to the UPF0176 family
TQ29_RS01040	COG1335	isochorismatase
TQ29_RS01045	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
TQ29_RS01060	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
TQ29_RS01065	COG3770	Murein endopeptidase that cleaves the D-alanyl-meso-2,6- diamino-pimelyl amide bond that connects peptidoglycan strands. Likely plays a role in the removal of murein from the sacculus
TQ29_RS01085	COG0514	ATP-dependent DNA helicase (RecQ)
TQ29_RS01090	COG3022	response to hydroperoxide
TQ29_RS01105	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
TQ29_RS01115	COG0560	Phosphoserine phosphatase
TQ29_RS01115	COG3830	Belongs to the UPF0237 family
TQ29_RS01125	COG0820	rRNA (adenine-C2-)-methyltransferase activity
TQ29_RS01135	COG2171	N-acyltransferase activity
TQ29_RS01150	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
TQ29_RS01170	COG0557	exoribonuclease II activity
TQ29_RS01175	COG2951	lytic endotransglycosylase activity
TQ29_RS01180	COG1051	belongs to the nudix hydrolase family
TQ29_RS01185	COG0793	Belongs to the peptidase S41A family
TQ29_RS01195	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
TQ29_RS01200	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
TQ29_RS01205	COG0799	negative regulation of ribosome biogenesis
TQ29_RS01220	COG0747	negative chemotaxis
TQ29_RS01225	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
TQ29_RS01235	COG0583	DNA-binding transcription factor activity
TQ29_RS01255	COG4608	Belongs to the ABC transporter superfamily
TQ29_RS01265	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
TQ29_RS01280	COG3264	Mechanosensitive ion channel
TQ29_RS01280	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
TQ29_RS01285	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
TQ29_RS01295	COG0066	3-isopropylmalate dehydratase activity
TQ29_RS01310	COG0473	3-isopropylmalate dehydrogenase activity
TQ29_RS01315	COG0697	spore germination
TQ29_RS01325	COG3562	capsule polysaccharide
TQ29_RS01335	COG0288	reversible hydration of carbon dioxide
TQ29_RS01345	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
TQ29_RS01350	COG0791	NLP P60 protein
TQ29_RS01370	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
TQ29_RS01375	COG3510	cephalosporin hydroxylase
TQ29_RS01380	COG1671	Belongs to the UPF0178 family
TQ29_RS01390	COG2423	ornithine cyclodeaminase activity
TQ29_RS01395	COG2267	carboxylic ester hydrolase activity
TQ29_RS01400	COG2271	Major facilitator Superfamily
TQ29_RS01405	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
TQ29_RS01410	COG0285	dihydrofolate synthase activity
TQ29_RS01415	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
TQ29_RS01425	COG0129	dihydroxy-acid dehydratase activity
TQ29_RS01445	COG0583	DNA-binding transcription factor activity
TQ29_RS01450	COG2885	chlorophyll binding
TQ29_RS01460	COG1058	Belongs to the CinA family
TQ29_RS01460	COG1546	Belongs to the CinA family
TQ29_RS01465	COG1489	DNA binding
TQ29_RS01470	COG0024	Methionine aminopeptidase
TQ29_RS01475	COG0742	ribosomal rna small subunit methyltransferase
TQ29_RS01485	COG0678	peroxiredoxin activity
TQ29_RS01490	COG0668	transmembrane transport
TQ29_RS01495	COG2154	pterin-4-alpha-carbinolamine dehydratase
TQ29_RS01515	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
TQ29_RS01540	COG0347	Belongs to the P(II) protein family
TQ29_RS01545	COG0004	ammonium transporteR
TQ29_RS01555	COG2897	thiosulfate sulfurtransferase activity
TQ29_RS01565	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
TQ29_RS01570	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
TQ29_RS01575	COG0741	lytic transglycosylase activity
TQ29_RS01585	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
TQ29_RS01585	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
TQ29_RS01600	COG1346	cytolysis
TQ29_RS01630	COG0435	Glutathione S-transferase
TQ29_RS01640	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
TQ29_RS01645	COG0242	peptide deformylase activity
TQ29_RS01650	COG0242	peptide deformylase activity
TQ29_RS01655	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
TQ29_RS01665	COG0328	RNA-DNA hybrid ribonuclease activity
TQ29_RS01675	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
TQ29_RS01685	COG1758	RNA polymerase activity
TQ29_RS01700	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
TQ29_RS01705	COG0736	holo-[acyl-carrier-protein] synthase activity
TQ29_RS01710	COG0681	Belongs to the peptidase S26 family
TQ29_RS01715	COG0571	ribonuclease III activity
TQ29_RS01720	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
TQ29_RS01730	COG1381	Involved in DNA repair and RecF pathway recombination
TQ29_RS01750	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
TQ29_RS01755	COG0745	RESPONSE REGULATOR receiver
TQ29_RS01760	COG2205	protein histidine kinase activity
TQ29_RS01770	COG1660	Displays ATPase and GTPase activities
TQ29_RS01780	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
TQ29_RS01790	COG1250	3-hydroxyacyl-CoA dehydrogenase
TQ29_RS01810	COG2096	Adenosyltransferase
TQ29_RS01820	COG0300	oxidoreductase activity
TQ29_RS01830	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
TQ29_RS01840	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
TQ29_RS01865	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
TQ29_RS01870	COG0081	regulation of translation
TQ29_RS01875	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
TQ29_RS01880	COG0222	ribosome binding
TQ29_RS01885	COG0085	RNA polymerase activity
TQ29_RS01895	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
TQ29_RS01900	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
TQ29_RS01905	COG0049	tRNA binding
TQ29_RS01910	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
TQ29_RS01915	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
TQ29_RS01920	COG0051	transcription antitermination factor activity, RNA binding
TQ29_RS01925	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
TQ29_RS01930	COG0088	Forms part of the polypeptide exit tunnel
TQ29_RS01935	COG0089	rRNA binding
TQ29_RS01940	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
TQ29_RS01945	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
TQ29_RS01950	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
TQ29_RS01955	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
TQ29_RS01960	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
TQ29_RS01970	COG0255	Belongs to the universal ribosomal protein uL29 family
TQ29_RS01975	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
TQ29_RS01980	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
TQ29_RS01985	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
TQ29_RS01990	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
TQ29_RS01995	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
TQ29_RS02000	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
TQ29_RS02005	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
TQ29_RS02010	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
TQ29_RS02015	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
TQ29_RS02020	COG1841	ribosomal large subunit assembly
TQ29_RS02025	COG0200	Binds to the 23S rRNA
TQ29_RS02030	COG0201	protein transport
TQ29_RS02035	COG0563	adenylate kinase activity
TQ29_RS02045	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
TQ29_RS02050	COG0202	RNA polymerase activity
TQ29_RS02055	COG0203	ribosomal protein L17
TQ29_RS02075	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
TQ29_RS02080	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
TQ29_RS02090	COG0564	pseudouridine synthase activity
TQ29_RS02095	COG0546	phosphoglycolate phosphatase activity
TQ29_RS02105	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
TQ29_RS02110	COG4597	amino acid ABC transporter
TQ29_RS02115	COG0765	amino acid transport
TQ29_RS02120	COG1126	abc transporter atp-binding protein
TQ29_RS02145	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
TQ29_RS02150	COG0218	Necessary for normal cell division and for the maintenance of normal septation
TQ29_RS02160	COG0706	membrane insertase activity
TQ29_RS02165	COG3706	GGDEF domain
TQ29_RS02165	COG2203	Gaf domain
TQ29_RS02165	COG5001	Diguanylate cyclase
TQ29_RS02165	COG4251	negative regulation of phosphorylation
TQ29_RS02170	COG0037	tRNA processing
TQ29_RS02175	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
TQ29_RS02180	COG0594	ribonuclease P activity
TQ29_RS02185	COG0230	Belongs to the bacterial ribosomal protein bL34 family
TQ29_RS02195	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
TQ29_RS02220	COG2201	protein-glutamate methylesterase activity
TQ29_RS02240	COG0673	inositol 2-dehydrogenase activity
TQ29_RS02255	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
TQ29_RS02305	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
TQ29_RS02320	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
TQ29_RS02325	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
TQ29_RS02330	COG1643	Atp-dependent helicase
TQ29_RS02335	COG1703	isobutyryl-CoA mutase activity
TQ29_RS02355	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
TQ29_RS02385	COG1802	Transcriptional regulator
TQ29_RS02400	COG0508	dehydrogenase complex catalyzes the overall conversion of
TQ29_RS02405	COG0567	Dehydrogenase, E1 component
TQ29_RS02420	COG0045	succinate-CoA ligase (ADP-forming) activity
TQ29_RS02425	COG0039	L-malate dehydrogenase activity
TQ29_RS02435	COG2301	Belongs to the HpcH HpaI aldolase family
TQ29_RS02450	COG2030	dehydratase
TQ29_RS02485	COG0667	Aldo Keto reductase
TQ29_RS02490	COG0813	purine-nucleoside phosphorylase activity
TQ29_RS02505	COG0604	alcohol dehydrogenase
TQ29_RS02525	COG0730	response to heat
TQ29_RS02530	COG1079	Belongs to the binding-protein-dependent transport system permease family
TQ29_RS02540	COG3845	ABC transporter
TQ29_RS02545	COG1744	ABC transporter substrate-binding protein PnrA-like
TQ29_RS02560	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
TQ29_RS02575	COG2514	catechol 2,3-dioxygenase activity
TQ29_RS02580	COG0180	Tryptophanyl-tRNA synthetase
TQ29_RS02590	COG0728	peptidoglycan biosynthetic process
TQ29_RS02595	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
TQ29_RS02605	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
TQ29_RS02620	COG0657	acetylesterase activity
TQ29_RS02625	COG0606	chelatase, subunit chli
TQ29_RS02645	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
TQ29_RS02655	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
TQ29_RS02660	COG0339	signal peptide processing
TQ29_RS02680	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
TQ29_RS02685	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
TQ29_RS02700	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
TQ29_RS02710	COG1079	Belongs to the binding-protein-dependent transport system permease family
TQ29_RS02715	COG4603	Belongs to the binding-protein-dependent transport system permease family
TQ29_RS02720	COG3845	ABC transporter
TQ29_RS02730	COG1529	Aldehyde oxidase and xanthine dehydrogenase
TQ29_RS02765	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
TQ29_RS02770	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
TQ29_RS02780	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
TQ29_RS02795	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
TQ29_RS02805	COG0701	Predicted permease
TQ29_RS02810	COG2862	Uncharacterized protein family, UPF0114
TQ29_RS02815	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
TQ29_RS02820	COG0287	Prephenate dehydrogenase
TQ29_RS02845	COG1857	crispr-associated protein
TQ29_RS02860	COG1518	maintenance of DNA repeat elements
TQ29_RS02865	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
TQ29_RS02880	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
TQ29_RS02885	COG1522	sequence-specific DNA binding
TQ29_RS02905	COG0559	Belongs to the binding-protein-dependent transport system permease family
TQ29_RS02935	COG1079	Belongs to the binding-protein-dependent transport system permease family
TQ29_RS02940	COG4603	Belongs to the binding-protein-dependent transport system permease family
TQ29_RS02945	COG3845	ABC transporter
TQ29_RS02950	COG1744	ABC transporter substrate-binding protein PnrA-like
TQ29_RS02965	COG0667	Aldo Keto reductase
TQ29_RS02970	COG2186	Transcriptional regulator
TQ29_RS02980	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
TQ29_RS03000	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
TQ29_RS03010	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
TQ29_RS03020	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
TQ29_RS03025	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
TQ29_RS03030	COG0355	proton-transporting ATP synthase activity, rotational mechanism
TQ29_RS03055	COG2983	Belongs to the UPF0260 family
TQ29_RS03060	COG0196	riboflavin kinase activity
TQ29_RS03065	COG2030	dehydratase
TQ29_RS03075	COG1227	inorganic diphosphatase activity
TQ29_RS03085	COG0459	protein refolding
TQ29_RS03090	COG3153	acetyltransferase
TQ29_RS03110	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
TQ29_RS03115	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
TQ29_RS03140	COG0529	Catalyzes the synthesis of activated sulfate
TQ29_RS03140	COG2046	Belongs to the sulfate adenylyltransferase family
TQ29_RS03145	COG0492	ferredoxin-NADP+ reductase activity
TQ29_RS03150	COG1522	sequence-specific DNA binding
TQ29_RS03160	COG1496	oxidoreductase activity
TQ29_RS03170	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
TQ29_RS03190	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
TQ29_RS03220	COG0667	Aldo Keto reductase
TQ29_RS03255	COG1595	DNA-templated transcription, initiation
TQ29_RS03315	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
TQ29_RS03330	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
TQ29_RS03335	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
TQ29_RS03340	COG3237	CsbD-like
TQ29_RS03345	COG1435	thymidine kinase activity
TQ29_RS03355	COG0513	Belongs to the DEAD box helicase family
TQ29_RS03360	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
TQ29_RS03375	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
TQ29_RS03380	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
TQ29_RS03405	COG0346	lactoylglutathione lyase activity
TQ29_RS03420	COG0778	Nitroreductase
TQ29_RS03425	COG1872	DUF167
TQ29_RS03460	COG2824	Alkylphosphonate utilization operon protein PhnA
TQ29_RS03470	COG3038	cytochrome b561
TQ29_RS03490	COG4303	Ethanolamine ammonia lyase large subunit
TQ29_RS03495	COG1177	transmembrane transport
TQ29_RS03505	COG3842	ATPase activity
TQ29_RS03515	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
TQ29_RS03520	COG4221	oxidoreductase activity
TQ29_RS03525	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
TQ29_RS03540	COG3119	arylsulfatase activity
TQ29_RS03570	COG5002	protein histidine kinase activity
TQ29_RS03580	COG4608	Belongs to the ABC transporter superfamily
TQ29_RS03585	COG0444	Belongs to the ABC transporter superfamily
TQ29_RS03595	COG0747	negative chemotaxis
TQ29_RS03605	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
TQ29_RS03615	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
TQ29_RS03640	COG1047	Peptidyl-prolyl cis-trans
TQ29_RS03650	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
TQ29_RS03655	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
TQ29_RS03660	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
TQ29_RS03680	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
TQ29_RS03695	COG1702	phosphate starvation-inducible protein PhoH
TQ29_RS03700	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
TQ29_RS03705	COG1253	flavin adenine dinucleotide binding
TQ29_RS03710	COG0815	Transfers the fatty acyl group on membrane lipoproteins
TQ29_RS03715	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
TQ29_RS03720	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
TQ29_RS03725	COG0220	tRNA (guanine-N7-)-methyltransferase activity
TQ29_RS03730	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
TQ29_RS03735	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
TQ29_RS03745	COG0539	negative regulation of cytoplasmic translation
TQ29_RS03750	COG0776	regulation of translation
TQ29_RS03760	COG0135	phosphoribosylanthranilate isomerase activity
TQ29_RS03770	COG0133	tryptophan synthase activity
TQ29_RS03805	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
TQ29_RS03825	COG1304	FMN binding
TQ29_RS03835	COG1247	-acetyltransferase
TQ29_RS03840	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
TQ29_RS03855	COG0248	Ppx GppA phosphatase
TQ29_RS03860	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
TQ29_RS03870	COG0628	permease
TQ29_RS03875	COG0442	prolyl-tRNA aminoacylation
TQ29_RS03885	COG1136	(ABC) transporter
TQ29_RS03910	COG0187	DNA topoisomerase II activity
TQ29_RS03915	COG2326	polyphosphate kinase activity
TQ29_RS03925	COG0534	Mate efflux family protein
TQ29_RS03950	COG1846	Transcriptional regulator
TQ29_RS03975	COG1351	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NAD(P)H and FADH(2) as the reductant
TQ29_RS03995	COG1278	Cold shock
TQ29_RS04000	COG1393	Belongs to the ArsC family
TQ29_RS04015	COG3220	belongs to the UPF0276 family
TQ29_RS04025	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
TQ29_RS04030	COG0525	valine-tRNA ligase activity
TQ29_RS04065	COG0483	inositol monophosphate 1-phosphatase activity
TQ29_RS04085	COG1215	transferase activity, transferring glycosyl groups
TQ29_RS04105	COG1305	Transglutaminase-like
TQ29_RS04120	COG1116	anion transmembrane transporter activity
TQ29_RS04125	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
TQ29_RS04130	COG0402	S-adenosylhomocysteine deaminase activity
TQ29_RS04140	COG2249	NAD(P)H dehydrogenase (quinone) activity
TQ29_RS04145	COG2249	NAD(P)H dehydrogenase (quinone) activity
TQ29_RS04165	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
TQ29_RS04180	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
TQ29_RS04185	COG3707	response regulator
TQ29_RS04190	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
TQ29_RS04195	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
TQ29_RS04200	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
TQ29_RS04205	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
TQ29_RS04205	COG1116	anion transmembrane transporter activity
TQ29_RS04215	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
TQ29_RS04225	COG0243	molybdopterin cofactor binding
TQ29_RS04230	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
TQ29_RS04235	COG1648	precorrin-2 dehydrogenase activity
TQ29_RS04235	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
TQ29_RS04260	COG1028	Short-chain dehydrogenase reductase Sdr
TQ29_RS04265	COG0596	Alpha beta hydrolase
TQ29_RS04280	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
TQ29_RS04290	COG2204	response regulator
TQ29_RS04295	COG0784	Response regulator, receiver
TQ29_RS04295	COG2198	Histidine kinase
TQ29_RS04295	COG5002	protein histidine kinase activity
TQ29_RS04305	COG0281	malic enzyme
TQ29_RS04305	COG0280	phosphate acetyltransferase
TQ29_RS04315	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
TQ29_RS04320	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
TQ29_RS04325	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
TQ29_RS04330	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
TQ29_RS04345	COG0318	PFAM AMP-dependent synthetase and ligase
TQ29_RS04355	COG1024	Enoyl-CoA hydratase
TQ29_RS04355	COG1250	3-hydroxyacyl-CoA dehydrogenase
TQ29_RS04365	COG0183	Belongs to the thiolase family
TQ29_RS04370	COG0625	glutathione transferase activity
TQ29_RS04380	COG1960	acyl-CoA dehydrogenase activity
TQ29_RS04410	COG0534	Mate efflux family protein
TQ29_RS04420	COG0167	dihydroorotate dehydrogenase activity
TQ29_RS04430	COG0737	Belongs to the 5'-nucleotidase family
TQ29_RS04435	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
TQ29_RS04445	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
TQ29_RS04455	COG0318	PFAM AMP-dependent synthetase and ligase
TQ29_RS04460	COG1652	LysM domain
TQ29_RS04465	COG1132	(ABC) transporter
TQ29_RS04475	COG2814	Major facilitator Superfamily
TQ29_RS04480	COG1846	Transcriptional regulator
TQ29_RS04495	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
TQ29_RS04500	COG1744	ABC transporter substrate-binding protein PnrA-like
TQ29_RS04505	COG3845	ABC transporter
TQ29_RS04510	COG4603	Belongs to the binding-protein-dependent transport system permease family
TQ29_RS04515	COG1079	Belongs to the binding-protein-dependent transport system permease family
TQ29_RS04535	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
TQ29_RS04555	COG1172	Belongs to the binding-protein-dependent transport system permease family
TQ29_RS04560	COG0559	Belongs to the binding-protein-dependent transport system permease family
TQ29_RS04575	COG1305	Transglutaminase-like
TQ29_RS04585	COG2308	Evidence 4 Homologs of previously reported genes of
TQ29_RS04590	COG1490	D-aminoacyl-tRNA deacylase activity
TQ29_RS04600	COG0071	Belongs to the small heat shock protein (HSP20) family
TQ29_RS04620	COG3853	Toxic anion resistance protein (TelA)
TQ29_RS04630	COG0861	Integral membrane protein TerC family
TQ29_RS04635	COG1187	pseudouridine synthase activity
TQ29_RS04640	COG0590	tRNA wobble adenosine to inosine editing
TQ29_RS04645	COG0583	DNA-binding transcription factor activity
TQ29_RS04655	COG0670	Belongs to the BI1 family
TQ29_RS04660	COG3791	Glutathione-dependent formaldehyde-activating
TQ29_RS04665	COG0267	Belongs to the bacterial ribosomal protein bL33 family
TQ29_RS04670	COG3023	N-Acetylmuramoyl-L-alanine amidase
TQ29_RS04680	COG0154	amidase activity
TQ29_RS04700	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
TQ29_RS04705	COG0604	alcohol dehydrogenase
TQ29_RS04705	COG1028	Short-chain dehydrogenase reductase Sdr
TQ29_RS04705	COG3321	synthase
TQ29_RS04710	COG1396	sequence-specific DNA binding
TQ29_RS04715	COG0483	inositol monophosphate 1-phosphatase activity
TQ29_RS04745	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
TQ29_RS04760	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
TQ29_RS04795	COG2710	Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein
TQ29_RS04800	COG2710	Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein
TQ29_RS04825	COG5420	small protein containing a coiled-coil domain
TQ29_RS04850	COG1104	cysteine desulfurase activity
TQ29_RS04870	COG2086	electron transfer activity
TQ29_RS04875	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
TQ29_RS04880	COG0644	oxidoreductase
TQ29_RS04885	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
TQ29_RS04890	COG0725	ABC transporter, periplasmic molybdate-binding protein
TQ29_RS04895	COG4149	molybdate abc transporter
TQ29_RS04925	COG0583	DNA-binding transcription factor activity
TQ29_RS04940	COG1079	Belongs to the binding-protein-dependent transport system permease family
TQ29_RS04945	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
TQ29_RS04950	COG1335	isochorismatase
TQ29_RS04955	COG3845	ABC transporter
TQ29_RS04970	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
TQ29_RS04980	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
TQ29_RS05010	COG2076	Multidrug Resistance protein
TQ29_RS05015	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
TQ29_RS05025	COG2226	methyltransferase
TQ29_RS05030	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
TQ29_RS05040	COG1216	Glycosyl transferase, family 2
TQ29_RS05045	COG0463	Glycosyl transferase, family 2
TQ29_RS05060	COG0726	polysaccharide deacetylase
TQ29_RS05070	COG0438	transferase activity, transferring glycosyl groups
TQ29_RS05100	COG2226	methyltransferase
TQ29_RS05105	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
TQ29_RS05145	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
TQ29_RS05150	COG0101	tRNA pseudouridine synthase activity
TQ29_RS05155	COG3106	COG3106 Predicted ATPase
TQ29_RS05160	COG3768	UPF0283 membrane protein
TQ29_RS05165	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
TQ29_RS05180	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
TQ29_RS05195	COG1595	DNA-templated transcription, initiation
TQ29_RS05205	COG2391	methyltransferase activity
TQ29_RS05215	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
TQ29_RS05220	COG0563	adenylate kinase activity
TQ29_RS05225	COG2264	protein methyltransferase activity
TQ29_RS05245	COG0632	four-way junction helicase activity
TQ29_RS05250	COG2255	four-way junction helicase activity
TQ29_RS05260	COG0824	Thioesterase
TQ29_RS05285	COG2885	chlorophyll binding
TQ29_RS05295	COG0037	tRNA processing
TQ29_RS05300	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
TQ29_RS05310	COG2759	Belongs to the formate--tetrahydrofolate ligase family
TQ29_RS05320	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
TQ29_RS05335	COG1201	RNA secondary structure unwinding
TQ29_RS05390	COG4964	Belongs to the GSP D family
TQ29_RS05430	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
TQ29_RS05430	COG1754	DNA topoisomerase type I activity
TQ29_RS05435	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
TQ29_RS05435	COG0758	DNA mediated transformation
TQ29_RS05440	COG0312	modulator of DNA gyrase
TQ29_RS05460	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
TQ29_RS05480	COG0612	Peptidase, M16
TQ29_RS05505	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
TQ29_RS05510	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
TQ29_RS05515	COG0659	secondary active sulfate transmembrane transporter activity
TQ29_RS05535	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
TQ29_RS05540	COG0527	aspartate kinase activity
TQ29_RS05545	COG1028	Short-chain dehydrogenase reductase Sdr
TQ29_RS05560	COG0386	Belongs to the glutathione peroxidase family
TQ29_RS05570	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
TQ29_RS05575	COG1519	Transferase
TQ29_RS05585	COG4251	negative regulation of phosphorylation
TQ29_RS05620	COG0633	Ferredoxin
TQ29_RS05630	COG1028	Short-chain dehydrogenase reductase Sdr
TQ29_RS05635	COG1012	belongs to the aldehyde dehydrogenase family
TQ29_RS05670	COG1012	belongs to the aldehyde dehydrogenase family
TQ29_RS05690	COG2186	Transcriptional regulator
TQ29_RS05700	COG2186	Transcriptional regulator
TQ29_RS05720	COG1635	Involved in the biosynthesis of the thiazole moiety of thiamine. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5-(2-hydroxyethyl)-4-methylthiazole-2-carboxylate (ADT), an adenylated thiazole intermediate, using free sulfide as a source of sulfur
TQ29_RS05730	COG1804	L-carnitine dehydratase bile acid-inducible protein F
TQ29_RS05735	COG1804	L-carnitine dehydratase bile acid-inducible protein F
TQ29_RS05760	COG1804	L-carnitine dehydratase bile acid-inducible protein F
TQ29_RS05770	COG0583	DNA-binding transcription factor activity
TQ29_RS05775	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
TQ29_RS05785	COG3485	protocatechuate 3,4-dioxygenase
TQ29_RS05790	COG3485	protocatechuate 3,4-dioxygenase
TQ29_RS05795	COG3246	L-lysine catabolic process to acetate
TQ29_RS05800	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
TQ29_RS05815	COG1278	Cold shock
TQ29_RS05830	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
TQ29_RS05835	COG1832	CoA-binding protein
TQ29_RS05840	COG0140	phosphoribosyl-ATP diphosphatase activity
TQ29_RS05845	COG0107	imidazoleglycerol-phosphate synthase activity
TQ29_RS05850	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
TQ29_RS05855	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
TQ29_RS05865	COG0131	Imidazoleglycerol-phosphate dehydratase
TQ29_RS05870	COG2205	protein histidine kinase activity
TQ29_RS05870	COG2202	Pas domain
TQ29_RS05880	COG5002	protein histidine kinase activity
TQ29_RS05885	COG0745	RESPONSE REGULATOR receiver
TQ29_RS05895	COG0745	RESPONSE REGULATOR receiver
TQ29_RS05905	COG0861	Integral membrane protein TerC family
TQ29_RS05915	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
TQ29_RS05920	COG0210	DNA helicase
TQ29_RS05935	COG0489	protein tyrosine kinase activity
TQ29_RS05945	COG0275	rRNA processing
TQ29_RS05960	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
TQ29_RS05965	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
TQ29_RS05970	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
TQ29_RS05975	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
TQ29_RS05980	COG0039	L-malate dehydrogenase activity
TQ29_RS05990	COG3119	arylsulfatase activity
TQ29_RS06000	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
TQ29_RS06005	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
TQ29_RS06010	COG0531	amino acid
TQ29_RS06030	COG0812	UDP-N-acetylmuramate dehydrogenase activity
TQ29_RS06035	COG1181	Belongs to the D-alanine--D-alanine ligase family
TQ29_RS06040	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
TQ29_RS06050	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
TQ29_RS06055	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
TQ29_RS06060	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
TQ29_RS06080	COG0006	proline dipeptidase activity
TQ29_RS06090	COG1525	nuclease
TQ29_RS06120	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
TQ29_RS06130	COG0484	heat shock protein binding
TQ29_RS06145	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
TQ29_RS06165	COG0308	aminopeptidase N
TQ29_RS06175	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
TQ29_RS06185	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
TQ29_RS06215	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
TQ29_RS06245	COG1473	amidohydrolase
TQ29_RS06255	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
TQ29_RS06275	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
TQ29_RS06280	COG0546	phosphoglycolate phosphatase activity
TQ29_RS06285	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
TQ29_RS06305	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
TQ29_RS06310	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
TQ29_RS06370	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
TQ29_RS06375	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
TQ29_RS06390	COG0713	ATP synthesis coupled electron transport
TQ29_RS06415	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
TQ29_RS06425	COG0513	Belongs to the DEAD box helicase family
TQ29_RS06435	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
TQ29_RS06445	COG1192	Involved in chromosome partitioning
TQ29_RS06460	COG3842	ATPase activity
TQ29_RS06470	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
TQ29_RS06480	COG0805	protein transport
TQ29_RS06495	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
TQ29_RS06505	COG1028	Short-chain dehydrogenase reductase Sdr
TQ29_RS06510	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
TQ29_RS06515	COG1286	toxin biosynthetic process
TQ29_RS06530	COG1127	ABC transporter
TQ29_RS06535	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
TQ29_RS06545	COG0305	Participates in initiation and elongation during chromosome replication
TQ29_RS06555	COG0418	dihydroorotase activity
TQ29_RS06560	COG0829	nickel cation binding
TQ29_RS06565	COG0831	urea catabolic process
TQ29_RS06570	COG0832	Belongs to the urease beta subunit family
TQ29_RS06585	COG0804	urea catabolic process
TQ29_RS06595	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
TQ29_RS06605	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
TQ29_RS06620	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
TQ29_RS06640	COG1280	lysine exporter protein (LysE YggA)
TQ29_RS06655	COG0577	efflux transmembrane transporter activity
TQ29_RS06655	COG1136	(ABC) transporter
TQ29_RS06660	COG0577	efflux transmembrane transporter activity
TQ29_RS06660	COG1136	(ABC) transporter
TQ29_RS06665	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
TQ29_RS06680	COG1522	sequence-specific DNA binding
TQ29_RS06715	COG2197	response regulator
TQ29_RS06745	COG2271	Major facilitator Superfamily
TQ29_RS06770	COG4264	IucA IucC family
TQ29_RS06805	COG0765	amino acid transport
TQ29_RS06810	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
TQ29_RS06815	COG0765	amino acid transport
TQ29_RS06830	COG2146	nitrite reductase [NAD(P)H] activity
TQ29_RS06840	COG3608	succinylglutamate desuccinylase aspartoacylase
TQ29_RS06855	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
TQ29_RS06865	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
TQ29_RS06865	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
TQ29_RS06875	COG3676	manually curated
TQ29_RS06890	COG0356	it plays a direct role in the translocation of protons across the membrane
TQ29_RS06925	COG0584	glycerophosphoryl diester phosphodiesterase
TQ29_RS06960	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
TQ29_RS06965	COG1737	Transcriptional regulator
TQ29_RS06970	COG3550	peptidyl-serine autophosphorylation
TQ29_RS06975	COG3620	sequence-specific DNA binding
TQ29_RS06985	COG4372	Transposase
TQ29_RS06990	COG3436	PFAM IS66 Orf2 family protein
TQ29_RS06995	COG2963	transposase activity
TQ29_RS07005	COG0464	growth
TQ29_RS07030	COG3328	transposase activity
TQ29_RS07050	COG1475	DNA binding
TQ29_RS07080	COG0629	single-stranded DNA binding
TQ29_RS07185	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
TQ29_RS07195	COG2963	transposase activity
TQ29_RS07205	COG4372	Transposase
TQ29_RS07230	COG4962	Type ii secretion system protein e
TQ29_RS07245	COG3451	type IV secretory pathway VirB4
TQ29_RS07260	COG3846	protein secretion by the type IV secretion system
TQ29_RS07290	COG3550	peptidyl-serine autophosphorylation
TQ29_RS07315	COG1401	restriction endodeoxyribonuclease activity
TQ29_RS07330	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
TQ29_RS07335	COG0730	response to heat
TQ29_RS07340	COG1233	COG1233 Phytoene dehydrogenase and related
TQ29_RS07350	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
TQ29_RS07355	COG4235	cytochrome complex assembly
TQ29_RS07360	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
TQ29_RS07370	COG0404	The glycine cleavage system catalyzes the degradation of glycine
TQ29_RS07370	COG0446	pyridine nucleotide-disulphide oxidoreductase
TQ29_RS07400	COG5265	(ABC) transporter
TQ29_RS07405	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
TQ29_RS07420	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
TQ29_RS07425	COG1160	GTP binding
TQ29_RS07430	COG0129	dihydroxy-acid dehydratase activity
TQ29_RS07480	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
TQ29_RS07485	COG0010	Belongs to the arginase family
TQ29_RS07495	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
TQ29_RS07500	COG2890	protein-(glutamine-N5) methyltransferase activity
TQ29_RS07510	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
TQ29_RS07515	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
TQ29_RS07520	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
TQ29_RS07525	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
TQ29_RS07535	COG0795	lipopolysaccharide-transporting ATPase activity
TQ29_RS07540	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
TQ29_RS07550	COG3577	Aspartyl protease
TQ29_RS07555	COG2095	MarC family integral membrane protein
TQ29_RS07560	COG0488	(ABC) transporter
TQ29_RS07565	COG0105	UTP biosynthetic process
TQ29_RS07575	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
TQ29_RS07605	COG0837	glucose binding
TQ29_RS07610	COG0316	Belongs to the HesB IscA family
TQ29_RS07615	COG0232	Belongs to the dGTPase family. Type 2 subfamily
TQ29_RS07625	COG0018	arginyl-trna synthetase
TQ29_RS07635	COG1472	Belongs to the glycosyl hydrolase 3 family
TQ29_RS07640	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
TQ29_RS07645	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
TQ29_RS07655	COG0717	Belongs to the dCTP deaminase family
TQ29_RS07670	COG0776	regulation of translation
TQ29_RS07675	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
TQ29_RS07680	COG0416	fatty acid biosynthetic process
TQ29_RS07685	COG0333	Belongs to the bacterial ribosomal protein bL32 family
TQ29_RS07700	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
TQ29_RS07710	COG0488	(ABC) transporter
TQ29_RS07735	COG0215	cysteine-tRNA ligase activity
TQ29_RS07740	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
TQ29_RS07760	COG2814	Major facilitator Superfamily
TQ29_RS07765	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
TQ29_RS07785	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
TQ29_RS07795	COG0166	Belongs to the GPI family
TQ29_RS07820	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
TQ29_RS07830	COG0248	Ppx GppA phosphatase
TQ29_RS07835	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
TQ29_RS07840	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
TQ29_RS07850	COG1752	Esterase of the alpha-beta hydrolase superfamily
TQ29_RS07855	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
TQ29_RS07875	COG4608	Belongs to the ABC transporter superfamily
TQ29_RS07880	COG0444	Belongs to the ABC transporter superfamily
TQ29_RS07885	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
TQ29_RS07890	COG0601	transmembrane transport
TQ29_RS07895	COG4166	transmembrane transport
TQ29_RS07905	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
TQ29_RS07910	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
TQ29_RS07915	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
TQ29_RS07925	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
TQ29_RS07965	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
TQ29_RS08030	COG0544	peptidyl-prolyl cis-trans isomerase activity
TQ29_RS08035	COG0359	binds to the 23S rRNA
TQ29_RS08040	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
TQ29_RS08045	COG0360	Binds together with S18 to 16S ribosomal RNA
TQ29_RS08065	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
TQ29_RS08075	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
TQ29_RS08080	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
TQ29_RS08085	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
TQ29_RS08100	COG4695	Portal protein
TQ29_RS08195	COG0508	dehydrogenase complex catalyzes the overall conversion of
TQ29_RS08200	COG0022	dehydrogenase e1 component
TQ29_RS08200	COG0508	dehydrogenase complex catalyzes the overall conversion of
TQ29_RS08205	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
TQ29_RS08210	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
TQ29_RS08215	COG1830	Aldolase
TQ29_RS08220	COG0126	phosphoglycerate kinase activity
TQ29_RS08240	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
TQ29_RS08245	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
TQ29_RS08255	COG0148	phosphopyruvate hydratase activity
TQ29_RS08290	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
TQ29_RS08305	COG1840	ABC-type Fe3 transport system, periplasmic component
TQ29_RS08310	COG3956	TIGRFAM MazG family protein
TQ29_RS08320	COG2081	HI0933 family
TQ29_RS08325	COG0745	RESPONSE REGULATOR receiver
TQ29_RS08330	COG0784	Response regulator, receiver
TQ29_RS08330	COG2205	protein histidine kinase activity
TQ29_RS08330	COG2198	Histidine kinase
TQ29_RS08350	COG0411	ABC transporter
TQ29_RS08405	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
TQ29_RS08425	COG0433	COG0433 Predicted ATPase
TQ29_RS08430	COG4536	flavin adenine dinucleotide binding
TQ29_RS08435	COG4974	Belongs to the 'phage' integrase family
TQ29_RS08445	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
TQ29_RS08450	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
TQ29_RS08460	COG1994	Peptidase M50
TQ29_RS08460	COG0517	IMP dehydrogenase activity
TQ29_RS08465	COG0629	single-stranded DNA binding
TQ29_RS08475	COG1196	nuclear chromosome segregation
TQ29_RS08475	COG0741	lytic transglycosylase activity
TQ29_RS08475	COG0739	heme binding
TQ29_RS08480	COG2329	Antibiotic biosynthesis monooxygenase
TQ29_RS08485	COG0697	spore germination
TQ29_RS08495	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
TQ29_RS08500	COG0601	transmembrane transport
TQ29_RS08505	COG4166	transmembrane transport
TQ29_RS08520	COG0528	UMP kinase activity
TQ29_RS08525	COG0233	cytoplasmic translational termination
TQ29_RS08530	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
TQ29_RS08540	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
TQ29_RS08545	COG0750	zinc metalloprotease
TQ29_RS08550	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
TQ29_RS08560	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
TQ29_RS08565	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
TQ29_RS08570	COG3494	Protein of unknown function (DUF1009)
TQ29_RS08575	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
TQ29_RS08580	COG0482	sulfurtransferase activity
TQ29_RS08595	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
TQ29_RS08600	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
TQ29_RS08610	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
TQ29_RS08615	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
TQ29_RS08620	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
TQ29_RS08625	COG2259	Doxx family
TQ29_RS08630	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
TQ29_RS08635	COG5425	PFAM Usg family protein
TQ29_RS08645	COG1238	metal cluster binding
TQ29_RS08650	COG2321	neutral zinc metallopeptidase
TQ29_RS08705	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
TQ29_RS08715	COG1561	YicC-like family, N-terminal region
TQ29_RS08720	COG0194	GDP metabolic process
TQ29_RS08735	COG5002	protein histidine kinase activity
TQ29_RS08745	COG0573	inorganic phosphate transmembrane transporter activity
TQ29_RS08755	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
TQ29_RS08765	COG0745	RESPONSE REGULATOR receiver
TQ29_RS08770	COG2197	response regulator
TQ29_RS08775	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
TQ29_RS08780	COG0052	Belongs to the universal ribosomal protein uS2 family
TQ29_RS08785	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
TQ29_RS08785	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
TQ29_RS08790	COG2313	pseudouridylate synthase activity
TQ29_RS08810	COG1028	Short-chain dehydrogenase reductase Sdr
TQ29_RS08815	COG4166	transmembrane transport
TQ29_RS08845	COG2814	Major facilitator Superfamily
TQ29_RS08850	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
TQ29_RS08875	COG2124	cytochrome p450
TQ29_RS08885	COG0785	Cytochrome C biogenesis protein
TQ29_RS08895	COG1530	ribonuclease E activity
TQ29_RS08900	COG2204	response regulator
TQ29_RS08910	COG0047	phosphoribosylformylglycinamidine synthase activity
TQ29_RS08915	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
TQ29_RS08925	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
TQ29_RS08935	COG0392	lysyltransferase activity
TQ29_RS08935	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
TQ29_RS08940	COG0646	methionine synthase
TQ29_RS08940	COG1410	methionine synthase
TQ29_RS08950	COG5012	cobalamin binding
TQ29_RS08960	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
TQ29_RS08965	COG1923	regulation of RNA biosynthetic process
TQ29_RS08975	COG0569	domain protein
TQ29_RS08980	COG2204	response regulator
TQ29_RS08985	COG5000	phosphorelay sensor kinase activity
TQ29_RS08990	COG2204	response regulator
TQ29_RS08995	COG3852	Histidine kinase
TQ29_RS09000	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
TQ29_RS09005	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
TQ29_RS09005	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
TQ29_RS09015	COG1058	Belongs to the CinA family
TQ29_RS09015	COG1546	Belongs to the CinA family
TQ29_RS09020	COG2867	negative regulation of translational initiation
TQ29_RS09025	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
TQ29_RS09035	COG4608	Belongs to the ABC transporter superfamily
TQ29_RS09040	COG0444	Belongs to the ABC transporter superfamily
TQ29_RS09045	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
TQ29_RS09050	COG0601	transmembrane transport
TQ29_RS09065	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
TQ29_RS09070	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
TQ29_RS09080	COG0784	Response regulator, receiver
TQ29_RS09085	COG2202	Pas domain
TQ29_RS09085	COG2205	protein histidine kinase activity
TQ29_RS09095	COG2066	Belongs to the glutaminase family
TQ29_RS09095	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
TQ29_RS09125	COG0753	catalase activity
TQ29_RS09135	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
TQ29_RS09145	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
TQ29_RS09160	COG0719	Fe-S assembly protein
TQ29_RS09165	COG0396	ATPase activity
TQ29_RS09175	COG0393	Putative heavy-metal-binding
TQ29_RS09180	COG0719	Fe-S assembly protein
TQ29_RS09190	COG1959	2 iron, 2 sulfur cluster binding
TQ29_RS09195	COG2945	thiolester hydrolase activity
TQ29_RS09205	COG0538	isocitrate dehydrogenase activity
TQ29_RS09225	COG1217	gtp-binding protein TYPA
TQ29_RS09235	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
TQ29_RS09245	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
TQ29_RS09250	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
TQ29_RS09265	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
TQ29_RS09265	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
TQ29_RS09270	COG0517	IMP dehydrogenase activity
TQ29_RS09270	COG0516	GMP reductase activity
TQ29_RS09280	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
TQ29_RS09295	COG2010	Cytochrome c
TQ29_RS09300	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
TQ29_RS09315	COG0753	catalase activity
TQ29_RS09350	COG0518	GMP synthase (glutamine-hydrolyzing) activity
TQ29_RS09350	COG0519	Catalyzes the synthesis of GMP from XMP
TQ29_RS09365	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
TQ29_RS09370	COG2326	polyphosphate kinase activity
TQ29_RS09380	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
TQ29_RS09380	COG2755	lipolytic protein G-D-S-L family
TQ29_RS09385	COG0745	RESPONSE REGULATOR receiver
TQ29_RS09395	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
TQ29_RS09400	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
TQ29_RS09415	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
TQ29_RS09420	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
TQ29_RS09440	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
TQ29_RS09445	COG1612	heme a metabolic process
TQ29_RS09480	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
TQ29_RS09485	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
TQ29_RS09490	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
TQ29_RS09500	COG0211	Belongs to the bacterial ribosomal protein bL27 family
TQ29_RS09505	COG0261	This protein binds to 23S rRNA in the presence of protein L20
TQ29_RS09505	COG3743	rRNA binding
TQ29_RS09535	COG0783	Belongs to the Dps family
TQ29_RS09540	COG0450	alkyl hydroperoxide reductase
TQ29_RS09545	COG0583	DNA-binding transcription factor activity
TQ29_RS09555	COG0444	Belongs to the ABC transporter superfamily
TQ29_RS09560	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
TQ29_RS09565	COG0601	transmembrane transport
TQ29_RS09570	COG0747	negative chemotaxis
TQ29_RS09580	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
TQ29_RS09585	COG1012	belongs to the aldehyde dehydrogenase family
TQ29_RS09590	COG1522	sequence-specific DNA binding
TQ29_RS09595	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
TQ29_RS09600	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
TQ29_RS09605	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
TQ29_RS09610	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
TQ29_RS09615	COG0589	response to stress
TQ29_RS09625	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
TQ29_RS09630	COG2423	ornithine cyclodeaminase activity
TQ29_RS09635	COG0006	proline dipeptidase activity
TQ29_RS09640	COG3608	succinylglutamate desuccinylase aspartoacylase
TQ29_RS09650	COG2943	transferase activity, transferring hexosyl groups
TQ29_RS09660	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
TQ29_RS09670	COG0596	Alpha beta hydrolase
TQ29_RS09675	COG1846	Transcriptional regulator
TQ29_RS09680	COG1764	response to oxidative stress
TQ29_RS09685	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
TQ29_RS09700	COG0351	phosphomethylpyrimidine kinase
TQ29_RS09715	COG2022	thiamine diphosphate biosynthetic process
TQ29_RS09725	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
TQ29_RS09730	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
TQ29_RS09735	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
TQ29_RS09740	COG1116	anion transmembrane transporter activity
TQ29_RS09745	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
TQ29_RS09780	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
TQ29_RS09785	COG0842	Transport permease protein
TQ29_RS09785	COG1129	ABC transporter
TQ29_RS09790	COG0842	Transport permease protein
TQ29_RS09795	COG0640	Transcriptional regulator
TQ29_RS09815	COG1902	pentaerythritol trinitrate reductase activity
TQ29_RS09815	COG0446	pyridine nucleotide-disulphide oxidoreductase
TQ29_RS09840	COG1349	DNA-binding transcription factor activity
TQ29_RS09850	COG0404	The glycine cleavage system catalyzes the degradation of glycine
TQ29_RS09850	COG0446	pyridine nucleotide-disulphide oxidoreductase
TQ29_RS09855	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
TQ29_RS09890	COG0463	Glycosyl transferase, family 2
TQ29_RS09905	COG0556	nucleotide-excision repair
TQ29_RS09955	COG1384	Belongs to the class-I aminoacyl-tRNA synthetase family
TQ29_RS09970	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
TQ29_RS09985	COG0488	(ABC) transporter
TQ29_RS09995	COG3118	belongs to the thioredoxin family
TQ29_RS10005	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
TQ29_RS10005	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
TQ29_RS10015	COG0509	glycine decarboxylation via glycine cleavage system
TQ29_RS10020	COG0404	The glycine cleavage system catalyzes the degradation of glycine
TQ29_RS10030	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
TQ29_RS10045	COG0655	NAD(P)H dehydrogenase (quinone) activity
TQ29_RS10060	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
TQ29_RS10080	COG0768	penicillin binding
TQ29_RS10085	COG0772	Belongs to the SEDS family
TQ29_RS10090	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
TQ29_RS10100	COG1573	uracil-dna glycosylase
TQ29_RS10115	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
TQ29_RS10130	COG2877	3-deoxy-8-phosphooctulonate synthase activity
TQ29_RS10160	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
TQ29_RS10170	COG4608	Belongs to the ABC transporter superfamily
TQ29_RS10175	COG0444	Belongs to the ABC transporter superfamily
TQ29_RS10180	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
TQ29_RS10190	COG4166	transmembrane transport
TQ29_RS10200	COG4948	Mandelate Racemase Muconate Lactonizing
TQ29_RS10205	COG0154	amidase activity
TQ29_RS10235	COG0683	leucine binding
TQ29_RS10250	COG1609	Transcriptional regulator
TQ29_RS10255	COG0584	glycerophosphoryl diester phosphodiesterase
TQ29_RS10260	COG3842	ATPase activity
TQ29_RS10265	COG3833	ABC-type maltose transport systems, permease component
TQ29_RS10280	COG0456	acetyltransferase
TQ29_RS10320	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
TQ29_RS10330	COG0527	aspartate kinase activity
TQ29_RS10335	COG1917	Cupin 2, conserved barrel domain protein
TQ29_RS10340	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
TQ29_RS10350	COG1846	Transcriptional regulator
TQ29_RS10355	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
TQ29_RS10365	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
TQ29_RS10375	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
TQ29_RS10380	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
TQ29_RS10385	COG4133	protoheme IX ABC transporter activity
TQ29_RS10390	COG3737	Protein of unknown function (DUF498/DUF598)
TQ29_RS10400	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
TQ29_RS10405	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
TQ29_RS10410	COG1862	Preprotein translocase
TQ29_RS10415	COG3591	Belongs to the peptidase S1B family
TQ29_RS10420	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
TQ29_RS10430	COG0800	Aldolase
TQ29_RS10465	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
TQ29_RS10475	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
TQ29_RS10480	COG0028	Belongs to the TPP enzyme family
TQ29_RS10485	COG0440	acetolactate synthase activity
TQ29_RS10500	COG1741	Belongs to the pirin family
TQ29_RS10510	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
TQ29_RS10525	COG1278	Cold shock
TQ29_RS10530	COG0259	pyridoxamine-phosphate oxidase activity
TQ29_RS10535	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
TQ29_RS10540	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
TQ29_RS10560	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
TQ29_RS10585	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
TQ29_RS10600	COG0134	indole-3-glycerol-phosphate synthase activity
TQ29_RS10605	COG0315	cyclic pyranopterin monophosphate synthase activity
TQ29_RS10610	COG0303	'Molybdopterin
TQ29_RS10615	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
TQ29_RS10620	COG0658	competence protein
TQ29_RS10620	COG2333	competence protein COMEC
TQ29_RS10625	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
TQ29_RS10635	COG1116	anion transmembrane transporter activity
TQ29_RS10640	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
TQ29_RS10670	COG1024	Enoyl-CoA hydratase
TQ29_RS10675	COG3088	subunit of a heme lyase
TQ29_RS10680	COG1138	Cytochrome C-type biogenesis protein
TQ29_RS10695	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
TQ29_RS10700	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
TQ29_RS10715	COG0583	DNA-binding transcription factor activity
TQ29_RS10720	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
TQ29_RS10730	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
TQ29_RS10745	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
TQ29_RS10780	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
TQ29_RS10785	COG0517	IMP dehydrogenase activity
TQ29_RS10785	COG0516	GMP reductase activity
TQ29_RS10790	COG0583	DNA-binding transcription factor activity
TQ29_RS10800	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
TQ29_RS10820	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
TQ29_RS10840	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
TQ29_RS10850	COG0477	Major facilitator Superfamily
TQ29_RS10855	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
TQ29_RS10865	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
TQ29_RS10870	COG2833	Protein of unknown function (DUF455)
TQ29_RS10875	COG0739	heme binding
TQ29_RS10890	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
TQ29_RS10895	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
TQ29_RS10910	COG0436	Aminotransferase
TQ29_RS10925	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
TQ29_RS10935	COG0156	8-amino-7-oxononanoate synthase activity
TQ29_RS10965	COG1741	Belongs to the pirin family
TQ29_RS10990	COG0776	regulation of translation
TQ29_RS10995	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
TQ29_RS11005	COG1902	pentaerythritol trinitrate reductase activity
TQ29_RS11010	COG0343	queuine tRNA-ribosyltransferase activity
TQ29_RS11015	COG0189	ligase activity
TQ29_RS11015	COG4067	protein conserved in archaea
TQ29_RS11020	COG2151	metal-sulfur cluster biosynthetic enzyme
TQ29_RS11045	COG0149	triose-phosphate isomerase activity
TQ29_RS11050	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
TQ29_RS11055	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
TQ29_RS11060	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
TQ29_RS11090	COG3383	formate dehydrogenase (NAD+) activity
TQ29_RS11095	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
TQ29_RS11110	COG0811	peptide transport
TQ29_RS11115	COG1120	ATPase activity
TQ29_RS11120	COG4139	cobalamin transport
TQ29_RS11135	COG3454	Phosphonate metabolism
TQ29_RS11140	COG3627	carbon phosphorus lyase activity
TQ29_RS11150	COG3626	phosphonate metabolism
TQ29_RS11155	COG3624	Phosphonate C-P lyase system protein PhnG
TQ29_RS11165	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
TQ29_RS11170	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
TQ29_RS11175	COG3639	organic phosphonate transmembrane transporter activity
TQ29_RS11180	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
TQ29_RS11190	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
TQ29_RS11200	COG3639	organic phosphonate transmembrane transporter activity
TQ29_RS11240	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
TQ29_RS11275	COG4451	ribulose bisphosphate carboxylase, small
TQ29_RS11315	COG3454	Phosphonate metabolism
TQ29_RS11320	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
TQ29_RS11325	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
TQ29_RS11330	COG4778	phosphonate C-P lyase system protein PhnL
TQ29_RS11340	COG4107	phosphonate C-P lyase system protein PhnK
TQ29_RS11345	COG3627	carbon phosphorus lyase activity
TQ29_RS11350	COG3626	phosphonate metabolism
TQ29_RS11355	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
TQ29_RS11360	COG3624	Phosphonate C-P lyase system protein PhnG
TQ29_RS11365	COG2188	Transcriptional regulator
TQ29_RS11370	COG3454	Phosphonate metabolism
TQ29_RS11385	COG3639	organic phosphonate transmembrane transporter activity
TQ29_RS11395	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
TQ29_RS11425	COG0737	Belongs to the 5'-nucleotidase family
TQ29_RS11430	COG3258	Cytochrome c
TQ29_RS11455	COG0785	Cytochrome C biogenesis protein
TQ29_RS11475	COG0402	S-adenosylhomocysteine deaminase activity
TQ29_RS11480	COG1079	Belongs to the binding-protein-dependent transport system permease family
TQ29_RS11485	COG4603	Belongs to the binding-protein-dependent transport system permease family
TQ29_RS11490	COG3845	ABC transporter
TQ29_RS11510	COG1686	Belongs to the peptidase S11 family
TQ29_RS11515	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
TQ29_RS11525	COG0084	hydrolase, TatD family'
TQ29_RS11530	COG1234	tRNA 3'-trailer cleavage
TQ29_RS11545	COG1216	Glycosyl transferase, family 2
TQ29_RS11545	COG1442	glycosyl transferase family 8
TQ29_RS11560	COG1215	transferase activity, transferring glycosyl groups
TQ29_RS11565	COG1132	(ABC) transporter
TQ29_RS11580	COG0587	DNA-directed DNA polymerase activity
TQ29_RS11605	COG2072	flavoprotein involved in K transport
TQ29_RS11620	COG2368	4-hydroxyphenylacetate
TQ29_RS11625	COG0154	amidase activity
TQ29_RS11635	COG0402	S-adenosylhomocysteine deaminase activity
TQ29_RS11650	COG1902	pentaerythritol trinitrate reductase activity
TQ29_RS11655	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
TQ29_RS11660	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
TQ29_RS11695	COG0523	cobalamin synthesis protein
TQ29_RS11715	COG2010	Cytochrome c
TQ29_RS11725	COG1272	protein, Hemolysin III
TQ29_RS11740	COG0321	lipoyl(octanoyl) transferase activity
TQ29_RS11760	COG1610	YqeY-like protein
TQ29_RS11765	COG0505	Belongs to the CarA family
TQ29_RS11775	COG1802	Transcriptional regulator
TQ29_RS11800	COG1522	sequence-specific DNA binding
TQ29_RS11805	COG1522	sequence-specific DNA binding
TQ29_RS11810	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
TQ29_RS11830	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
TQ29_RS11830	COG0574	Belongs to the PEP-utilizing enzyme family
TQ29_RS11835	COG0751	glycine-tRNA ligase activity
TQ29_RS11845	COG0752	glycyl-tRNA synthetase alpha subunit
TQ29_RS11855	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
TQ29_RS11865	COG1846	Transcriptional regulator
TQ29_RS11880	COG0625	glutathione transferase activity
TQ29_RS11885	COG2917	probably involved in intracellular septation
TQ29_RS11895	COG1285	pathogenesis
TQ29_RS11905	COG0552	protein localization to endoplasmic reticulum
TQ29_RS11910	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
TQ29_RS11925	COG0151	Belongs to the GarS family
TQ29_RS11940	COG1802	Transcriptional regulator
TQ29_RS11950	COG3842	ATPase activity
TQ29_RS11955	COG1176	ABC-type spermidine putrescine transport system, permease component I
TQ29_RS11960	COG1177	transmembrane transport
TQ29_RS11995	COG0330	HflC and HflK could
TQ29_RS12000	COG0330	HflC and HflK could
TQ29_RS12010	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
TQ29_RS12030	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
TQ29_RS12045	COG0504	CTP synthase activity
TQ29_RS12085	COG0174	glutamine synthetase
TQ29_RS12090	COG0518	GMP synthase (glutamine-hydrolyzing) activity
TQ29_RS12090	COG0519	Catalyzes the synthesis of GMP from XMP
TQ29_RS12095	COG0174	glutamine synthetase
TQ29_RS12100	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
TQ29_RS12105	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
TQ29_RS12155	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
TQ29_RS12165	COG1132	(ABC) transporter
TQ29_RS12170	COG0354	folic acid binding
TQ29_RS12185	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
TQ29_RS12205	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
TQ29_RS12245	COG3264	Mechanosensitive ion channel
TQ29_RS12245	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
TQ29_RS12255	COG0494	nUDIX hydrolase
TQ29_RS12265	COG0415	Belongs to the DNA photolyase family
TQ29_RS12270	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
TQ29_RS12275	COG0604	alcohol dehydrogenase
TQ29_RS12280	COG0471	metal ion transport
TQ29_RS12295	COG0114	fumarate hydratase activity
TQ29_RS12310	COG2166	iron-sulfur cluster assembly
TQ29_RS12320	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
TQ29_RS12325	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
TQ29_RS12330	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
TQ29_RS12340	COG2205	protein histidine kinase activity
TQ29_RS12345	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
TQ29_RS12365	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
TQ29_RS12370	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
TQ29_RS12375	COG0512	Glutamine amidotransferase of anthranilate synthase
TQ29_RS12375	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
TQ29_RS12385	COG0302	gtp cyclohydrolase
TQ29_RS12390	COG1252	NADH dehydrogenase
TQ29_RS12410	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
TQ29_RS12415	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
TQ29_RS12435	COG4604	ABC transporter, ATP-binding protein
TQ29_RS12440	COG4605	iron ion homeostasis
TQ29_RS12445	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
TQ29_RS12450	COG4607	ABC-type enterochelin transport system periplasmic component
TQ29_RS12470	COG0811	peptide transport
TQ29_RS12475	COG4771	TonB-dependent receptor
TQ29_RS12490	COG0583	DNA-binding transcription factor activity
TQ29_RS12495	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
TQ29_RS12505	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
TQ29_RS12515	COG1129	ABC transporter
TQ29_RS12520	COG1172	Belongs to the binding-protein-dependent transport system permease family
TQ29_RS12555	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
TQ29_RS12560	COG2309	aminopeptidase activity
TQ29_RS12565	COG1335	isochorismatase
TQ29_RS12575	COG0596	Alpha beta hydrolase
TQ29_RS12580	COG1802	Transcriptional regulator
TQ29_RS12600	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
TQ29_RS12605	COG0444	Belongs to the ABC transporter superfamily
TQ29_RS12610	COG4608	Belongs to the ABC transporter superfamily
TQ29_RS12620	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
TQ29_RS12630	COG1172	Belongs to the binding-protein-dependent transport system permease family
TQ29_RS12640	COG1172	Belongs to the binding-protein-dependent transport system permease family
TQ29_RS12645	COG1172	Belongs to the binding-protein-dependent transport system permease family
TQ29_RS12650	COG1129	ABC transporter
TQ29_RS12655	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
TQ29_RS12665	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
TQ29_RS12670	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
TQ29_RS12675	COG3842	ATPase activity
TQ29_RS12690	COG2963	transposase activity
TQ29_RS12700	COG4372	Transposase
TQ29_RS12710	COG1176	ABC-type spermidine putrescine transport system, permease component I
TQ29_RS12740	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
TQ29_RS12760	COG2309	aminopeptidase activity
TQ29_RS12765	COG0596	Alpha beta hydrolase
TQ29_RS12785	COG0574	Belongs to the PEP-utilizing enzyme family
TQ29_RS12785	COG3848	Pyruvate phosphate dikinase
TQ29_RS12790	COG3848	Pyruvate phosphate dikinase
TQ29_RS12790	COG0574	Belongs to the PEP-utilizing enzyme family
TQ29_RS12795	COG1335	isochorismatase
TQ29_RS12850	COG0033	Phosphoglucomutase
TQ29_RS12860	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
TQ29_RS12890	COG0010	Belongs to the arginase family
TQ29_RS12895	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
TQ29_RS12910	COG0110	maltose O-acetyltransferase activity
TQ29_RS12930	COG3750	Belongs to the UPF0335 family
TQ29_RS12965	COG2391	methyltransferase activity
TQ29_RS12980	COG2205	protein histidine kinase activity
TQ29_RS12990	COG0745	RESPONSE REGULATOR receiver
TQ29_RS13010	COG1172	Belongs to the binding-protein-dependent transport system permease family
TQ29_RS13020	COG0410	ABC transporter
TQ29_RS13025	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
TQ29_RS13035	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
TQ29_RS13040	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
TQ29_RS13065	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
TQ29_RS13070	COG1309	transcriptional regulator
TQ29_RS13080	COG0493	'glutamate synthase
TQ29_RS13090	COG0439	Biotin carboxylase
TQ29_RS13095	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
TQ29_RS13115	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
TQ29_RS13120	COG0740	serine-type endopeptidase activity
TQ29_RS13125	COG4134	Bacterial extracellular solute-binding protein
TQ29_RS13130	COG4135	transport system, permease component
TQ29_RS13135	COG4136	ATPase activity
TQ29_RS13170	COG0784	Response regulator, receiver
TQ29_RS13210	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
TQ29_RS13215	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
TQ29_RS13235	COG2873	o-acetylhomoserine
TQ29_RS13255	COG1329	Transcriptional regulator
TQ29_RS13260	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
TQ29_RS13265	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
TQ29_RS13275	COG0457	Tetratricopeptide repeat
TQ29_RS13290	COG0179	Fumarylacetoacetate (FAA) hydrolase
TQ29_RS13325	COG0564	pseudouridine synthase activity
TQ29_RS13360	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
TQ29_RS13365	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
TQ29_RS13370	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
TQ29_RS13370	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
TQ29_RS13400	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
TQ29_RS13400	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
TQ29_RS13405	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
TQ29_RS13410	COG0432	Pfam Uncharacterised protein family UPF0047
TQ29_RS13425	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
TQ29_RS13440	COG0446	pyridine nucleotide-disulphide oxidoreductase
TQ29_RS13440	COG0404	The glycine cleavage system catalyzes the degradation of glycine
TQ29_RS13445	COG4311	Sarcosine oxidase, delta subunit
TQ29_RS13450	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
TQ29_RS13455	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
TQ29_RS13500	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
TQ29_RS13525	COG1804	L-carnitine dehydratase bile acid-inducible protein F
TQ29_RS13530	COG1960	acyl-CoA dehydrogenase activity
TQ29_RS13560	COG0446	pyridine nucleotide-disulphide oxidoreductase
TQ29_RS13570	COG1275	C4-dicarboxylate transporter malic acid transport protein
TQ29_RS13575	COG1108	ABC-type Mn2 Zn2 transport systems permease components
TQ29_RS13580	COG1121	(ABC) transporter
TQ29_RS13605	COG2351	hydroxyisourate hydrolase activity
TQ29_RS13615	COG3257	ureidoglycine aminohydrolase activity
TQ29_RS13620	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
TQ29_RS13625	COG2233	PERMEase
TQ29_RS13635	COG1294	oxidase, subunit
TQ29_RS13640	COG1271	oxidase subunit
TQ29_RS13645	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
TQ29_RS13650	COG4988	ABC transporter
TQ29_RS13670	COG0489	protein tyrosine kinase activity
TQ29_RS13670	COG3206	protein involved in exopolysaccharide biosynthesis
TQ29_RS13675	COG1596	polysaccharide export
TQ29_RS13685	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
TQ29_RS13725	COG0438	transferase activity, transferring glycosyl groups
TQ29_RS13780	COG0071	Belongs to the small heat shock protein (HSP20) family
TQ29_RS13790	COG1067	ATP-dependent peptidase activity
TQ29_RS13805	COG1176	ABC-type spermidine putrescine transport system, permease component I
TQ29_RS13815	COG3842	ATPase activity
TQ29_RS13830	COG0747	negative chemotaxis
TQ29_RS13835	COG0601	transmembrane transport
TQ29_RS13840	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
TQ29_RS13855	COG2603	Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
TQ29_RS13860	COG0709	Synthesizes selenophosphate from selenide and ATP
TQ29_RS13870	COG0577	efflux transmembrane transporter activity
TQ29_RS13875	COG4181	ATPase activity
TQ29_RS13885	COG3842	ATPase activity
TQ29_RS13890	COG1176	ABC-type spermidine putrescine transport system, permease component I
TQ29_RS13895	COG1177	transmembrane transport
TQ29_RS13935	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
TQ29_RS13940	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
TQ29_RS13945	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
TQ29_RS13955	COG2169	Transcriptional regulator
TQ29_RS13955	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
TQ29_RS13960	COG2885	chlorophyll binding
TQ29_RS13970	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
TQ29_RS13975	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
TQ29_RS13985	COG0356	it plays a direct role in the translocation of protons across the membrane
TQ29_RS14015	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
TQ29_RS14020	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
TQ29_RS14040	COG0228	four-way junction DNA binding
TQ29_RS14045	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
TQ29_RS14055	COG0335	large ribosomal subunit rRNA binding
TQ29_RS14060	COG0254	rRNA binding
TQ29_RS14065	COG2151	metal-sulfur cluster biosynthetic enzyme
TQ29_RS14065	COG0489	protein tyrosine kinase activity
TQ29_RS14135	COG0398	Pfam SNARE associated Golgi protein
TQ29_RS14190	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
TQ29_RS14200	COG0012	GTP binding
TQ29_RS14205	COG0159	tryptophan synthase activity
TQ29_RS14210	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
TQ29_RS14210	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
TQ29_RS14225	COG4770	biotin carboxylase activity
TQ29_RS14240	COG0251	oxidation-reduction process
TQ29_RS14250	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
TQ29_RS14255	COG2814	Major facilitator Superfamily
TQ29_RS14260	COG1396	sequence-specific DNA binding
TQ29_RS14260	COG3800	Transcriptional regulator
TQ29_RS14280	COG0217	transcriptional regulatory protein
TQ29_RS14285	COG0659	secondary active sulfate transmembrane transporter activity
TQ29_RS14295	COG3273	potassium ion transport
TQ29_RS14295	COG0471	metal ion transport
TQ29_RS14305	COG1692	metallophosphoesterase
TQ29_RS14310	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
TQ29_RS14315	COG2239	Acts as a magnesium transporter
TQ29_RS14320	COG0402	S-adenosylhomocysteine deaminase activity
TQ29_RS14335	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
TQ29_RS14340	COG1530	ribonuclease E activity
TQ29_RS14345	COG0424	maF-like protein
TQ29_RS14350	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
TQ29_RS14360	COG5328	Belongs to the UPF0262 family
TQ29_RS14365	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
TQ29_RS14380	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
TQ29_RS14430	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
TQ29_RS14455	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
TQ29_RS14470	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
TQ29_RS14530	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
TQ29_RS14535	COG1012	belongs to the aldehyde dehydrogenase family
TQ29_RS14555	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
TQ29_RS14560	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
TQ29_RS14565	COG0747	negative chemotaxis
TQ29_RS14575	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
TQ29_RS14585	COG3191	aminopeptidase activity
TQ29_RS14590	COG1012	belongs to the aldehyde dehydrogenase family
TQ29_RS14605	COG3591	Belongs to the peptidase S1B family
TQ29_RS14610	COG0247	lactate metabolic process
TQ29_RS14615	COG0277	FAD linked oxidase domain protein
TQ29_RS14620	COG0277	FAD linked oxidase domain protein
TQ29_RS14650	COG0714	Associated with various cellular activities
TQ29_RS14660	COG3622	Belongs to the hyi family
TQ29_RS14675	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
TQ29_RS14675	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
TQ29_RS14695	COG4181	ATPase activity
TQ29_RS14705	COG0277	FAD linked oxidase domain protein
TQ29_RS14715	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
TQ29_RS14725	COG1053	succinate dehydrogenase
TQ29_RS14745	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
TQ29_RS14780	COG2855	membrane
TQ29_RS14785	COG0181	hydroxymethylbilane synthase activity
TQ29_RS14790	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
TQ29_RS14810	COG0408	coproporphyrinogen oxidase activity
TQ29_RS14820	COG1028	Short-chain dehydrogenase reductase Sdr
TQ29_RS14825	COG2813	Specifically methylates the guanine in position
TQ29_RS14830	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
TQ29_RS14840	COG1686	Belongs to the peptidase S11 family
TQ29_RS14860	COG0348	domain, Protein
TQ29_RS14865	COG2010	Cytochrome c
TQ29_RS14890	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
TQ29_RS14895	COG0635	Involved in the biosynthesis of porphyrin-containing compound
TQ29_RS14900	COG4172	Belongs to the ABC transporter superfamily
TQ29_RS14905	COG4239	(ABC) transporter, permease
TQ29_RS14910	COG4174	ABC transporter (Permease)
TQ29_RS14915	COG4166	transmembrane transport
TQ29_RS14930	COG1605	Chorismate mutase
TQ29_RS14930	COG0077	Prephenate dehydratase
TQ29_RS14940	COG2816	NAD+ diphosphatase activity
TQ29_RS14945	COG0737	Belongs to the 5'-nucleotidase family
TQ29_RS14950	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
TQ29_RS14960	COG1116	anion transmembrane transporter activity
TQ29_RS14995	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
TQ29_RS15000	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
TQ29_RS15015	COG3038	cytochrome b561
TQ29_RS15020	COG1309	transcriptional regulator
TQ29_RS15040	COG2326	polyphosphate kinase activity
TQ29_RS15045	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
TQ29_RS15050	COG1522	sequence-specific DNA binding
TQ29_RS15055	COG0686	Belongs to the AlaDH PNT family
TQ29_RS15065	COG0625	glutathione transferase activity
TQ29_RS15075	COG0072	phenylalanine-tRNA ligase activity
TQ29_RS15075	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
TQ29_RS15085	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
TQ29_RS15090	COG0291	Belongs to the bacterial ribosomal protein bL35 family
TQ29_RS15095	COG0469	pyruvate kinase activity
TQ29_RS15125	COG4948	Mandelate Racemase Muconate Lactonizing
TQ29_RS15135	COG2301	Belongs to the HpcH HpaI aldolase family
TQ29_RS15145	COG0825	malonyl-CoA metabolic process
TQ29_RS15165	COG2884	Cell division ATP-binding protein ftsE
TQ29_RS15180	COG0019	diaminopimelate decarboxylase activity
TQ29_RS15185	COG0165	Argininosuccinate lyase
TQ29_RS15190	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
TQ29_RS15195	COG2818	Glycosylase
TQ29_RS15210	COG1028	Short-chain dehydrogenase reductase Sdr
TQ29_RS15215	COG2264	protein methyltransferase activity
TQ29_RS15225	COG0142	geranyltranstransferase activity
TQ29_RS15230	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
TQ29_RS15255	COG0746	molybdenum cofactor guanylyltransferase activity
TQ29_RS15290	COG1960	acyl-CoA dehydrogenase activity
TQ29_RS15295	COG0009	L-threonylcarbamoyladenylate synthase
TQ29_RS15310	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
TQ29_RS15325	COG0521	Mo-molybdopterin cofactor biosynthetic process
TQ29_RS15330	COG1573	uracil-dna glycosylase
TQ29_RS15335	COG0540	Belongs to the ATCase OTCase family
TQ29_RS15340	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
TQ29_RS15345	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
TQ29_RS15370	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
TQ29_RS15375	COG2885	chlorophyll binding
TQ29_RS15375	COG3047	cAMP biosynthetic process
TQ29_RS15385	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
TQ29_RS15395	COG0314	molybdopterin synthase activity
TQ29_RS15405	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
TQ29_RS15410	COG0322	excinuclease ABC activity
TQ29_RS15415	COG1028	Short-chain dehydrogenase reductase Sdr
TQ29_RS15430	COG0616	signal peptide processing
TQ29_RS15430	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
TQ29_RS15440	COG1618	nucleotide phosphatase activity, acting on free nucleotides
TQ29_RS15440	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
TQ29_RS15465	COG1858	cytochrome C peroxidase
TQ29_RS15490	COG2995	paraquat-inducible protein a
TQ29_RS15495	COG3008	intermembrane lipid transfer
TQ29_RS15495	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
TQ29_RS15525	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
TQ29_RS15535	COG0481	GTPase activity
TQ29_RS15550	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
TQ29_RS15555	COG0022	dehydrogenase e1 component
TQ29_RS15570	COG0508	dehydrogenase complex catalyzes the overall conversion of
TQ29_RS15585	COG2010	Cytochrome c
TQ29_RS15610	COG1028	Short-chain dehydrogenase reductase Sdr
TQ29_RS15635	COG3685	Protein conserved in bacteria
TQ29_RS15640	COG2124	cytochrome p450
TQ29_RS15655	COG0656	L-ascorbic acid biosynthetic process
TQ29_RS15660	COG3932	Exopolysaccharide synthesis, ExoD
TQ29_RS15680	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
TQ29_RS15685	COG2010	Cytochrome c
TQ29_RS15685	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
TQ29_RS15710	COG1877	trehalose-phosphatase activity
TQ29_RS15730	COG1028	Short-chain dehydrogenase reductase Sdr
TQ29_RS15735	COG1053	succinate dehydrogenase
TQ29_RS15775	COG1028	Short-chain dehydrogenase reductase Sdr
TQ29_RS15780	COG0179	Fumarylacetoacetate (FAA) hydrolase
TQ29_RS15795	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
TQ29_RS15800	COG0765	amino acid transport
TQ29_RS15805	COG0765	amino acid transport
TQ29_RS15810	COG4598	ABC transporter
TQ29_RS15815	COG2188	Transcriptional regulator
TQ29_RS15820	COG0583	DNA-binding transcription factor activity
TQ29_RS15835	COG0402	S-adenosylhomocysteine deaminase activity
TQ29_RS15840	COG1228	amidohydrolase
TQ29_RS15845	COG2986	histidine ammonia-lyase
TQ29_RS15855	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
TQ29_RS15870	COG0277	FAD linked oxidase domain protein
TQ29_RS15880	COG3284	Transcriptional regulator
TQ29_RS15885	COG0145	ligase activity
TQ29_RS15890	COG0146	N-methylhydantoinase B acetone carboxylase alpha subunit
TQ29_RS15895	COG4647	ligase activity
TQ29_RS15905	COG0405	Gamma-glutamyltransferase
TQ29_RS15910	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
TQ29_RS15925	COG4608	Belongs to the ABC transporter superfamily
TQ29_RS15930	COG0444	Belongs to the ABC transporter superfamily
TQ29_RS15940	COG4172	Belongs to the ABC transporter superfamily
TQ29_RS15965	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
TQ29_RS15975	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
TQ29_RS15985	COG0730	response to heat
TQ29_RS15990	COG2186	Transcriptional regulator
TQ29_RS15995	COG1079	Belongs to the binding-protein-dependent transport system permease family
TQ29_RS16005	COG1129	ABC transporter
TQ29_RS16010	COG1744	ABC transporter substrate-binding protein PnrA-like
TQ29_RS16020	COG2368	4-hydroxyphenylacetate
TQ29_RS16030	COG0154	amidase activity
TQ29_RS16035	COG0154	amidase activity
TQ29_RS16040	COG3180	Ammonia monooxygenase
TQ29_RS16045	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
TQ29_RS16050	COG2309	aminopeptidase activity
TQ29_RS16055	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
TQ29_RS16070	COG1959	2 iron, 2 sulfur cluster binding
TQ29_RS16085	COG4208	sulfate ABC transporter
TQ29_RS16090	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
TQ29_RS16095	COG1522	sequence-specific DNA binding
TQ29_RS16105	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
TQ29_RS16110	COG4569	acetaldehyde dehydrogenase (acetylating) activity
TQ29_RS16140	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
TQ29_RS16150	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
TQ29_RS16160	COG3971	2-oxopent-4-enoate hydratase activity
TQ29_RS16190	COG3384	dioxygenase
TQ29_RS16200	COG2267	carboxylic ester hydrolase activity
TQ29_RS16220	COG0318	PFAM AMP-dependent synthetase and ligase
TQ29_RS16245	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
TQ29_RS16250	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
TQ29_RS16270	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
TQ29_RS16280	COG1492	cobalamin metabolic process
TQ29_RS16325	COG2099	Precorrin-6x reductase
TQ29_RS16340	COG2875	Belongs to the precorrin methyltransferase family
TQ29_RS16345	COG1797	cobyrinic acid a,c-diamide synthase activity
TQ29_RS16350	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
TQ29_RS16350	COG1648	precorrin-2 dehydrogenase activity
TQ29_RS16365	COG1309	transcriptional regulator
TQ29_RS16380	COG1289	transmembrane transporter activity
TQ29_RS16405	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
TQ29_RS16410	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
TQ29_RS16460	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
TQ29_RS16480	COG0559	Belongs to the binding-protein-dependent transport system permease family
TQ29_RS16610	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
TQ29_RS16615	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
TQ29_RS16625	COG0069	glutamate synthase activity
TQ29_RS16640	COG0542	response to heat
TQ29_RS16650	COG0284	orotidine-5'-phosphate decarboxylase activity
TQ29_RS16660	COG1733	regulation of RNA biosynthetic process
TQ29_RS16675	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
TQ29_RS16690	COG0257	Belongs to the bacterial ribosomal protein bL36 family
TQ29_RS16695	COG3243	poly(R)-hydroxyalkanoic acid synthase
TQ29_RS16710	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
TQ29_RS16715	COG0612	Peptidase, M16
TQ29_RS16720	COG0612	Peptidase, M16
TQ29_RS16730	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
TQ29_RS16735	COG0138	bifunctional purine biosynthesis protein purh
TQ29_RS16755	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
TQ29_RS16760	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
TQ29_RS16770	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
TQ29_RS16775	COG0095	Lipoate-protein ligase
TQ29_RS16785	COG0022	dehydrogenase e1 component
TQ29_RS16790	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
TQ29_RS16810	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
TQ29_RS16815	COG1185	polyribonucleotide nucleotidyltransferase activity
TQ29_RS16820	COG0450	alkyl hydroperoxide reductase
TQ29_RS16830	COG0564	pseudouridine synthase activity
TQ29_RS16835	COG1956	GAF domain-containing protein
TQ29_RS16875	COG1674	ftsk spoiiie
TQ29_RS16880	COG0436	Aminotransferase
TQ29_RS16885	COG0154	amidase activity
TQ29_RS16890	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
TQ29_RS16895	COG2835	tetraacyldisaccharide 4'-kinase activity
TQ29_RS16920	COG0765	amino acid transport
TQ29_RS16925	COG0765	amino acid transport
TQ29_RS16930	COG0745	RESPONSE REGULATOR receiver
TQ29_RS16950	COG0457	Tetratricopeptide repeat
TQ29_RS16965	COG0495	leucyl-tRNA aminoacylation
TQ29_RS16980	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
TQ29_RS16985	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
TQ29_RS17005	COG0312	modulator of DNA gyrase
TQ29_RS17010	COG0483	inositol monophosphate 1-phosphatase activity
TQ29_RS17040	COG1194	a g-specific adenine glycosylase
TQ29_RS17050	COG1597	lipid kinase activity
TQ29_RS17065	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
TQ29_RS17075	COG0667	Aldo Keto reductase
TQ29_RS17090	COG1609	Transcriptional regulator
TQ29_RS17095	COG0463	Glycosyl transferase, family 2
TQ29_RS17105	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
TQ29_RS17115	COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase activity
TQ29_RS17120	COG1088	dTDP-glucose 4,6-dehydratase activity
TQ29_RS17125	COG1091	dTDP-4-dehydrorhamnose reductase activity
TQ29_RS17140	COG0729	surface antigen
TQ29_RS17145	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
TQ29_RS17145	COG1648	precorrin-2 dehydrogenase activity
TQ29_RS17155	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
TQ29_RS17175	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
TQ29_RS17180	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
TQ29_RS17190	COG0625	glutathione transferase activity
TQ29_RS17225	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
TQ29_RS17235	COG4143	(ABC) transporter
TQ29_RS17250	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
TQ29_RS17265	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
TQ29_RS17280	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
TQ29_RS17285	COG0142	geranyltranstransferase activity
TQ29_RS17290	COG1722	exodeoxyribonuclease VII activity
TQ29_RS17295	COG0123	including yeast histone deacetylase and acetoin utilization protein
TQ29_RS17300	COG0745	RESPONSE REGULATOR receiver
TQ29_RS17305	COG1846	Transcriptional regulator
TQ29_RS17310	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
TQ29_RS17335	COG1216	Glycosyl transferase, family 2
TQ29_RS17340	COG1216	Glycosyl transferase, family 2
TQ29_RS17355	COG1216	Glycosyl transferase, family 2
TQ29_RS17370	COG1215	transferase activity, transferring glycosyl groups
TQ29_RS17390	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
TQ29_RS17410	COG1596	polysaccharide export
TQ29_RS17420	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
TQ29_RS17420	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
TQ29_RS17435	COG0179	Fumarylacetoacetate (FAA) hydrolase
TQ29_RS17445	COG3246	L-lysine catabolic process to acetate
TQ29_RS17455	COG1028	Short-chain dehydrogenase reductase Sdr
TQ29_RS17485	COG0596	Alpha beta hydrolase
TQ29_RS17485	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
TQ29_RS17490	COG2909	trisaccharide binding
TQ29_RS17505	COG0431	NADPH-dependent FMN reductase
TQ29_RS17505	COG1053	succinate dehydrogenase
TQ29_RS17505	COG3976	FMN-binding domain protein
TQ29_RS17530	COG1028	Short-chain dehydrogenase reductase Sdr
TQ29_RS17535	COG0183	Belongs to the thiolase family
TQ29_RS17550	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
TQ29_RS17555	COG1960	acyl-CoA dehydrogenase activity
TQ29_RS17570	COG1804	L-carnitine dehydratase bile acid-inducible protein F
TQ29_RS17575	COG1028	Short-chain dehydrogenase reductase Sdr
TQ29_RS17590	COG1028	Short-chain dehydrogenase reductase Sdr
TQ29_RS17595	COG1053	succinate dehydrogenase
TQ29_RS17610	COG2084	Dehydrogenase
TQ29_RS17615	COG2124	cytochrome p450
TQ29_RS17620	COG0633	Ferredoxin
TQ29_RS17630	COG1960	acyl-CoA dehydrogenase activity
TQ29_RS17635	COG1028	Short-chain dehydrogenase reductase Sdr
TQ29_RS17645	COG0604	alcohol dehydrogenase
TQ29_RS17655	COG1960	acyl-CoA dehydrogenase activity
TQ29_RS17670	COG1960	acyl-CoA dehydrogenase activity
TQ29_RS17680	COG0183	Belongs to the thiolase family
TQ29_RS17755	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
TQ29_RS17810	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
TQ29_RS17815	COG0589	response to stress
TQ29_RS17820	COG0589	response to stress
TQ29_RS17825	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
TQ29_RS17830	COG0288	reversible hydration of carbon dioxide
TQ29_RS17840	COG0583	DNA-binding transcription factor activity
TQ29_RS17925	COG0640	Transcriptional regulator
TQ29_RS17935	COG1192	Involved in chromosome partitioning
TQ29_RS17950	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
TQ29_RS18070	COG0653	protein targeting
TQ29_RS18085	COG0183	Belongs to the thiolase family
TQ29_RS18090	COG1250	3-hydroxyacyl-CoA dehydrogenase
TQ29_RS18090	COG1024	Enoyl-CoA hydratase
TQ29_RS18095	COG1960	acyl-CoA dehydrogenase activity
TQ29_RS18105	COG2030	dehydratase
TQ29_RS18150	COG4644	lycopene metabolic process
TQ29_RS18160	COG2610	gluconate transmembrane transporter activity
TQ29_RS18190	COG2111	Na H antiporter
TQ29_RS18190	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
TQ29_RS18195	COG1006	Multisubunit Na H antiporter MnhC subunit
TQ29_RS18200	COG0651	ATP synthesis coupled electron transport
TQ29_RS18210	COG2212	antiporter activity
TQ29_RS18250	COG1230	cation diffusion facilitator family transporter
TQ29_RS18255	COG0398	Pfam SNARE associated Golgi protein
TQ29_RS18290	COG1138	Cytochrome C-type biogenesis protein
TQ29_RS18295	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
TQ29_RS18300	COG3088	subunit of a heme lyase
TQ29_RS18305	COG4235	cytochrome complex assembly
TQ29_RS18335	COG2010	Cytochrome c
TQ29_RS18340	COG2132	Multicopper oxidase
TQ29_RS18350	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
TQ29_RS18350	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
TQ29_RS18355	COG2217	Heavy metal translocating P-type atpase
TQ29_RS18380	COG2132	Multicopper oxidase
TQ29_RS18410	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
TQ29_RS18430	COG0785	Cytochrome C biogenesis protein
TQ29_RS18450	COG1321	iron dependent repressor
TQ29_RS18460	COG0815	Transfers the fatty acyl group on membrane lipoproteins
TQ29_RS18465	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
TQ29_RS18485	COG1999	signal sequence binding
TQ29_RS18495	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
TQ29_RS18505	COG1999	signal sequence binding
TQ29_RS18510	COG0789	Transcriptional regulator
TQ29_RS18560	COG0739	heme binding
TQ29_RS18560	COG0741	lytic transglycosylase activity
TQ29_RS18560	COG1196	nuclear chromosome segregation
TQ29_RS18580	COG0741	lytic transglycosylase activity
TQ29_RS18580	COG1196	nuclear chromosome segregation
TQ29_RS18580	COG0739	heme binding
TQ29_RS18600	COG2948	multi-organism process
TQ29_RS18605	COG4962	Type ii secretion system protein e
TQ29_RS18715	COG0464	growth
TQ29_RS18750	COG2207	Transcriptional regulator
TQ29_RS18755	COG1028	Short-chain dehydrogenase reductase Sdr
TQ29_RS18760	COG2072	flavoprotein involved in K transport
TQ29_RS18820	COG1028	Short-chain dehydrogenase reductase Sdr
TQ29_RS18825	COG1960	acyl-CoA dehydrogenase activity
TQ29_RS18830	COG1960	acyl-CoA dehydrogenase activity
TQ29_RS18835	COG2030	dehydratase
TQ29_RS18845	COG0183	Belongs to the thiolase family
TQ29_RS18855	COG0583	DNA-binding transcription factor activity
TQ29_RS18860	COG1960	acyl-CoA dehydrogenase activity
TQ29_RS18870	COG3777	bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
TQ29_RS18885	COG1063	alcohol dehydrogenase
TQ29_RS18940	COG4962	Type ii secretion system protein e
TQ29_RS18945	COG2948	multi-organism process
TQ29_RS18965	COG0741	lytic transglycosylase activity
TQ29_RS18965	COG1196	nuclear chromosome segregation
TQ29_RS18965	COG0739	heme binding
TQ29_RS18985	COG1196	nuclear chromosome segregation
TQ29_RS18985	COG0739	heme binding
TQ29_RS18985	COG0741	lytic transglycosylase activity
TQ29_RS19020	COG1487	ribonuclease activity
TQ29_RS19025	COG1002	Type II restriction enzyme, methylase subunits
TQ29_RS19040	COG1061	Type III restriction enzyme res subunit
TQ29_RS19045	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
TQ29_RS19050	COG4644	lycopene metabolic process
TQ29_RS19060	COG0625	glutathione transferase activity
TQ29_RS19105	COG0179	Fumarylacetoacetate (FAA) hydrolase
TQ29_RS19120	COG1804	L-carnitine dehydratase bile acid-inducible protein F
TQ29_RS19155	COG2146	nitrite reductase [NAD(P)H] activity
TQ29_RS19180	COG1522	sequence-specific DNA binding
TQ29_RS19225	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
TQ29_RS19250	COG1414	Transcriptional regulator
TQ29_RS19260	COG1192	Involved in chromosome partitioning
TQ29_RS19270	COG3546	catalase activity
TQ29_RS19280	COG1028	Short-chain dehydrogenase reductase Sdr
TQ29_RS19295	COG2032	superoxide dismutase activity
TQ29_RS19315	COG1295	ribonuclease BN
TQ29_RS19340	COG0366	Alpha amylase catalytic
TQ29_RS19400	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
TQ29_RS19440	COG0739	heme binding
TQ29_RS19440	COG0741	lytic transglycosylase activity
TQ29_RS19440	COG1196	nuclear chromosome segregation
TQ29_RS19455	COG3451	type IV secretory pathway VirB4
TQ29_RS19465	COG0741	lytic transglycosylase activity
TQ29_RS19465	COG0739	heme binding
TQ29_RS19465	COG1196	nuclear chromosome segregation
TQ29_RS19485	COG2948	multi-organism process
TQ29_RS19510	COG1230	cation diffusion facilitator family transporter
TQ29_RS19520	COG4644	lycopene metabolic process
TQ29_RS19560	COG3177	Filamentation induced by cAMP protein fic
TQ29_RS19570	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
TQ29_RS19590	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
TQ29_RS19595	COG3831	ATPase activity
TQ29_RS19685	COG1477	protein flavinylation
TQ29_RS19705	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
TQ29_RS19730	COG1475	DNA binding
TQ29_RS19745	COG1192	Involved in chromosome partitioning
TQ29_RS19780	COG2132	Multicopper oxidase
TQ29_RS19785	COG1321	iron dependent repressor
TQ29_RS19795	COG2132	Multicopper oxidase
TQ29_RS19810	COG2010	Cytochrome c
TQ29_RS19835	COG3034	peptidoglycan biosynthetic process
TQ29_RS19845	COG2366	antibiotic biosynthetic process
TQ29_RS19855	COG0815	Transfers the fatty acyl group on membrane lipoproteins
TQ29_RS19880	COG1999	signal sequence binding
TQ29_RS19890	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
TQ29_RS19890	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
TQ29_RS19900	COG1999	signal sequence binding
TQ29_RS19905	COG0789	Transcriptional regulator
TQ29_RS19920	COG1230	cation diffusion facilitator family transporter
TQ29_RS19935	COG0785	Cytochrome C biogenesis protein
TQ29_RS20005	COG1012	belongs to the aldehyde dehydrogenase family
TQ29_RS20065	COG0739	heme binding
TQ29_RS20065	COG0741	lytic transglycosylase activity
TQ29_RS20065	COG1196	nuclear chromosome segregation
TQ29_RS20085	COG0739	heme binding
TQ29_RS20085	COG0741	lytic transglycosylase activity
TQ29_RS20085	COG1196	nuclear chromosome segregation
TQ29_RS20105	COG2948	multi-organism process
TQ29_RS20110	COG4962	Type ii secretion system protein e
TQ29_RS20245	COG0501	Belongs to the peptidase M48B family
TQ29_RS20305	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
TQ29_RS20385	COG0828	Belongs to the bacterial ribosomal protein bS21 family
TQ29_RS20690	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
TQ29_RS20690	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
TQ29_RS20885	COG1309	transcriptional regulator
TQ29_RS20920	COG2001	Belongs to the MraZ family
TQ29_RS21050	COG0583	DNA-binding transcription factor activity
TQ29_RS21230	COG2197	response regulator