##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM2195318v1 #!genome-build-accession NCBI_Assembly:GCF_021953185.1 #!annotation-date 02/05/2022 07:47:22 #!annotation-source NCBI RefSeq ##sequence-region NZ_CP031858.1 1 2361730 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=715 NZ_CP031858.1 RefSeq region 1 2361730 . + . ID=NZ_CP031858.1:1..2361730;Dbxref=taxon:715;Is_circular=true;Name=ANONYMOUS;gbkey=Src;genome=chromosome;mol_type=genomic DNA;nat-host=pig;strain=A-85/14 NZ_CP031858.1 RefSeq pseudogene 78 492 . + . ID=gene-D1109_RS00010;Name=D1109_RS00010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D1109_RS00010;old_locus_tag=D1109_00010;pseudo=true NZ_CP031858.1 Protein Homology CDS 78 492 . + 0 ID=cds-D1109_RS00010;Parent=gene-D1109_RS00010;Note=frameshifted;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652757.1;locus_tag=D1109_RS00010;product=phage virion morphogenesis protein;pseudo=true;transl_table=11 NZ_CP031858.1 RefSeq gene 761 1645 . + . ID=gene-D1109_RS00015;Name=D1109_RS00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00015;old_locus_tag=D1109_00015 NZ_CP031858.1 Protein Homology CDS 761 1645 . + 0 ID=cds-WP_237611153.1;Parent=gene-D1109_RS00015;Dbxref=Genbank:WP_237611153.1;Name=WP_237611153.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021627.2;locus_tag=D1109_RS00015;product=phage protease;protein_id=WP_237611153.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1821 2717 . + . ID=gene-D1109_RS00020;Name=D1109_RS00020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00020;old_locus_tag=D1109_00020 NZ_CP031858.1 Protein Homology CDS 1821 2717 . + 0 ID=cds-WP_237611154.1;Parent=gene-D1109_RS00020;Dbxref=Genbank:WP_237611154.1;Name=WP_237611154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652759.1;locus_tag=D1109_RS00020;product=Mu-like prophage major head subunit gpT family protein;protein_id=WP_237611154.1;transl_table=11 NZ_CP031858.1 RefSeq pseudogene 2753 3123 . + . ID=gene-D1109_RS00025;Name=D1109_RS00025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D1109_RS00025;old_locus_tag=D1109_00025;pseudo=true NZ_CP031858.1 Protein Homology CDS 2753 3123 . + 0 ID=cds-D1109_RS00025;Parent=gene-D1109_RS00025;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652760.1;locus_tag=D1109_RS00025;product=transcriptional regulator;pseudo=true;transl_table=11 NZ_CP031858.1 RefSeq gene 3123 3509 . + . ID=gene-D1109_RS00030;Name=D1109_RS00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00030;old_locus_tag=D1109_00030 NZ_CP031858.1 Protein Homology CDS 3123 3509 . + 0 ID=cds-WP_237611155.1;Parent=gene-D1109_RS00030;Dbxref=Genbank:WP_237611155.1;Name=WP_237611155.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018704.2;locus_tag=D1109_RS00030;product=DUF1320 domain-containing protein;protein_id=WP_237611155.1;transl_table=11 NZ_CP031858.1 RefSeq gene 3506 3913 . + . ID=gene-D1109_RS00035;Name=D1109_RS00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00035;old_locus_tag=D1109_00035 NZ_CP031858.1 GeneMarkS-2+ CDS 3506 3913 . + 0 ID=cds-WP_237611156.1;Parent=gene-D1109_RS00035;Dbxref=Genbank:WP_237611156.1;Name=WP_237611156.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=D1109_RS00035;product=hypothetical protein;protein_id=WP_237611156.1;transl_table=11 NZ_CP031858.1 RefSeq gene 3941 4105 . + . ID=gene-D1109_RS00040;Name=D1109_RS00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00040 NZ_CP031858.1 Protein Homology CDS 3941 4105 . + 0 ID=cds-WP_237611157.1;Parent=gene-D1109_RS00040;Dbxref=Genbank:WP_237611157.1;Name=WP_237611157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005579269.1;locus_tag=D1109_RS00040;product=hypothetical protein;protein_id=WP_237611157.1;transl_table=11 NZ_CP031858.1 RefSeq gene 4098 4841 . + . ID=gene-D1109_RS00045;Name=D1109_RS00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00045;old_locus_tag=D1109_00040 NZ_CP031858.1 Protein Homology CDS 4098 4841 . + 0 ID=cds-WP_237611158.1;Parent=gene-D1109_RS00045;Dbxref=Genbank:WP_237611158.1;Name=WP_237611158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010944520.1;locus_tag=D1109_RS00045;product=hypothetical protein;protein_id=WP_237611158.1;transl_table=11 NZ_CP031858.1 RefSeq gene 4896 5306 . + . ID=gene-D1109_RS00050;Name=D1109_RS00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00050;old_locus_tag=D1109_00045 NZ_CP031858.1 Protein Homology CDS 4896 5306 . + 0 ID=cds-WP_237611159.1;Parent=gene-D1109_RS00050;Dbxref=Genbank:WP_237611159.1;Name=WP_237611159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010944521.1;locus_tag=D1109_RS00050;product=hypothetical protein;protein_id=WP_237611159.1;transl_table=11 NZ_CP031858.1 RefSeq gene 5483 5737 . - . ID=gene-D1109_RS00055;Name=D1109_RS00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00055;old_locus_tag=D1109_00055 NZ_CP031858.1 Protein Homology CDS 5483 5737 . - 0 ID=cds-WP_237611160.1;Parent=gene-D1109_RS00055;Dbxref=Genbank:WP_237611160.1;Name=WP_237611160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010944522.1;locus_tag=D1109_RS00055;product=hypothetical protein;protein_id=WP_237611160.1;transl_table=11 NZ_CP031858.1 RefSeq gene 5752 6012 . + . ID=gene-D1109_RS00060;Name=D1109_RS00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00060 NZ_CP031858.1 GeneMarkS-2+ CDS 5752 6012 . + 0 ID=cds-WP_237611161.1;Parent=gene-D1109_RS00060;Dbxref=Genbank:WP_237611161.1;Name=WP_237611161.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=D1109_RS00060;product=hypothetical protein;protein_id=WP_237611161.1;transl_table=11 NZ_CP031858.1 RefSeq gene 6048 6575 . + . ID=gene-D1109_RS00065;Name=D1109_RS00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00065 NZ_CP031858.1 Protein Homology CDS 6048 6575 . + 0 ID=cds-WP_237611162.1;Parent=gene-D1109_RS00065;Dbxref=Genbank:WP_237611162.1;Name=WP_237611162.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040129.1;locus_tag=D1109_RS00065;product=tape measure protein;protein_id=WP_237611162.1;transl_table=11 NZ_CP031858.1 RefSeq gene 6529 7452 . + . ID=gene-D1109_RS00070;Name=D1109_RS00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00070 NZ_CP031858.1 GeneMarkS-2+ CDS 6529 7452 . + 0 ID=cds-WP_237611163.1;Parent=gene-D1109_RS00070;Dbxref=Genbank:WP_237611163.1;Name=WP_237611163.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=D1109_RS00070;product=hypothetical protein;protein_id=WP_237611163.1;transl_table=11 NZ_CP031858.1 RefSeq gene 7620 7766 . + . ID=gene-D1109_RS00075;Name=D1109_RS00075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00075 NZ_CP031858.1 GeneMarkS-2+ CDS 7620 7766 . + 0 ID=cds-WP_237611164.1;Parent=gene-D1109_RS00075;Dbxref=Genbank:WP_237611164.1;Name=WP_237611164.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=D1109_RS00075;product=hypothetical protein;protein_id=WP_237611164.1;transl_table=11 NZ_CP031858.1 RefSeq gene 7798 9102 . + . ID=gene-D1109_RS00080;Name=D1109_RS00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00080 NZ_CP031858.1 GeneMarkS-2+ CDS 7798 9102 . + 0 ID=cds-WP_237611165.1;Parent=gene-D1109_RS00080;Dbxref=Genbank:WP_237611165.1;Name=WP_237611165.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=D1109_RS00080;product=hypothetical protein;protein_id=WP_237611165.1;transl_table=11 NZ_CP031858.1 RefSeq gene 9102 10100 . + . ID=gene-D1109_RS00085;Name=D1109_RS00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00085;old_locus_tag=D1109_00065 NZ_CP031858.1 Protein Homology CDS 9102 10100 . + 0 ID=cds-WP_237611166.1;Parent=gene-D1109_RS00085;Dbxref=Genbank:WP_237611166.1;Name=WP_237611166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597537.1;locus_tag=D1109_RS00085;product=hypothetical protein;protein_id=WP_237611166.1;transl_table=11 NZ_CP031858.1 RefSeq gene 10103 11068 . + . ID=gene-D1109_RS00090;Name=D1109_RS00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00090;old_locus_tag=D1109_00070 NZ_CP031858.1 Protein Homology CDS 10103 11068 . + 0 ID=cds-WP_237611167.1;Parent=gene-D1109_RS00090;Dbxref=Genbank:WP_237611167.1;Name=WP_237611167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005601445.1;locus_tag=D1109_RS00090;product=hypothetical protein;protein_id=WP_237611167.1;transl_table=11 NZ_CP031858.1 RefSeq gene 11071 12753 . + . ID=gene-D1109_RS00095;Name=D1109_RS00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00095;old_locus_tag=D1109_00075 NZ_CP031858.1 Protein Homology CDS 11071 12753 . + 0 ID=cds-WP_237611168.1;Parent=gene-D1109_RS00095;Dbxref=Genbank:WP_237611168.1;Name=WP_237611168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005601447.1;locus_tag=D1109_RS00095;product=phage tail protein;protein_id=WP_237611168.1;transl_table=11 NZ_CP031858.1 RefSeq gene 12787 13596 . + . ID=gene-D1109_RS00100;Name=D1109_RS00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00100;old_locus_tag=D1109_00080 NZ_CP031858.1 Protein Homology CDS 12787 13596 . + 0 ID=cds-WP_237611169.1;Parent=gene-D1109_RS00100;Dbxref=Genbank:WP_237611169.1;Name=WP_237611169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005610206.1;locus_tag=D1109_RS00100;product=phage BR0599 family protein;protein_id=WP_237611169.1;transl_table=11 NZ_CP031858.1 RefSeq gene 13614 13865 . + . ID=gene-D1109_RS00105;Name=D1109_RS00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00105;old_locus_tag=D1109_00085 NZ_CP031858.1 Protein Homology CDS 13614 13865 . + 0 ID=cds-WP_005597545.1;Parent=gene-D1109_RS00105;Dbxref=Genbank:WP_005597545.1;Name=WP_005597545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597545.1;locus_tag=D1109_RS00105;product=hypothetical protein;protein_id=WP_005597545.1;transl_table=11 NZ_CP031858.1 RefSeq gene 13870 14073 . + . ID=gene-D1109_RS00110;Name=D1109_RS00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00110;old_locus_tag=D1109_00090 NZ_CP031858.1 Protein Homology CDS 13870 14073 . + 0 ID=cds-WP_237611170.1;Parent=gene-D1109_RS00110;Dbxref=Genbank:WP_237611170.1;Name=WP_237611170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597546.1;locus_tag=D1109_RS00110;product=hypothetical protein;protein_id=WP_237611170.1;transl_table=11 NZ_CP031858.1 RefSeq pseudogene 14073 16399 . + . ID=gene-D1109_RS00115;Name=D1109_RS00115;end_range=16399,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D1109_RS00115;old_locus_tag=D1109_00095;partial=true;pseudo=true NZ_CP031858.1 Protein Homology CDS 14073 16399 . + 0 ID=cds-D1109_RS00115;Parent=gene-D1109_RS00115;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=16399,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597548.1;locus_tag=D1109_RS00115;partial=true;product=phage tail protein;pseudo=true;transl_table=11 NZ_CP031858.1 RefSeq gene 16588 16710 . + . ID=gene-D1109_RS00120;Name=D1109_RS00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00120;old_locus_tag=D1109_00100 NZ_CP031858.1 Protein Homology CDS 16588 16710 . + 0 ID=cds-WP_237611171.1;Parent=gene-D1109_RS00120;Dbxref=Genbank:WP_237611171.1;Name=WP_237611171.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021626.2;locus_tag=D1109_RS00120;product=Com family DNA-binding transcriptional regulator;protein_id=WP_237611171.1;transl_table=11 NZ_CP031858.1 RefSeq pseudogene 16762 17605 . + . ID=gene-D1109_RS00125;Name=D1109_RS00125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D1109_RS00125;old_locus_tag=D1109_00105;pseudo=true NZ_CP031858.1 Protein Homology CDS 16762 17605 . + 0 ID=cds-D1109_RS00125;Parent=gene-D1109_RS00125;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005640692.1;locus_tag=D1109_RS00125;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP031858.1 RefSeq gene 18311 19531 . + . ID=gene-D1109_RS00130;Name=rhlB;gbkey=Gene;gene=rhlB;gene_biotype=protein_coding;locus_tag=D1109_RS00130;old_locus_tag=D1109_00110 NZ_CP031858.1 Protein Homology CDS 18311 19531 . + 0 ID=cds-WP_005611760.1;Parent=gene-D1109_RS00130;Dbxref=Genbank:WP_005611760.1;Name=WP_005611760.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=rhlB;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005611760.1;locus_tag=D1109_RS00130;product=ATP-dependent RNA helicase RhlB;protein_id=WP_005611760.1;transl_table=11 NZ_CP031858.1 RefSeq gene 19649 20071 . + . ID=gene-D1109_RS00135;Name=D1109_RS00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00135;old_locus_tag=D1109_00115 NZ_CP031858.1 Protein Homology CDS 19649 20071 . + 0 ID=cds-WP_005611761.1;Parent=gene-D1109_RS00135;Dbxref=Genbank:WP_005611761.1;Name=WP_005611761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005617051.1;locus_tag=D1109_RS00135;product=hypothetical protein;protein_id=WP_005611761.1;transl_table=11 NZ_CP031858.1 RefSeq gene 20122 21606 . + . ID=gene-D1109_RS00140;Name=D1109_RS00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00140;old_locus_tag=D1109_00120 NZ_CP031858.1 Protein Homology CDS 20122 21606 . + 0 ID=cds-WP_005611764.1;Parent=gene-D1109_RS00140;Dbxref=Genbank:WP_005611764.1;Name=WP_005611764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991586.1;locus_tag=D1109_RS00140;product=DUF853 domain-containing protein;protein_id=WP_005611764.1;transl_table=11 NZ_CP031858.1 RefSeq gene 21806 22837 . + . ID=gene-D1109_RS00145;Name=D1109_RS00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00145;old_locus_tag=D1109_00125 NZ_CP031858.1 Protein Homology CDS 21806 22837 . + 0 ID=cds-WP_237611172.1;Parent=gene-D1109_RS00145;Dbxref=Genbank:WP_237611172.1;Name=WP_237611172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005617056.1;locus_tag=D1109_RS00145;product=ABC transporter substrate-binding protein;protein_id=WP_237611172.1;transl_table=11 NZ_CP031858.1 RefSeq gene 22968 24968 . + . ID=gene-D1109_RS00150;Name=D1109_RS00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00150;old_locus_tag=D1109_00130 NZ_CP031858.1 Protein Homology CDS 22968 24968 . + 0 ID=cds-WP_237586554.1;Parent=gene-D1109_RS00150;Dbxref=Genbank:WP_237586554.1;Name=WP_237586554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005614795.1;locus_tag=D1109_RS00150;product=iron ABC transporter permease;protein_id=WP_237586554.1;transl_table=11 NZ_CP031858.1 RefSeq pseudogene 25350 25607 . + . ID=gene-D1109_RS00155;Name=D1109_RS00155;end_range=25607,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D1109_RS00155;partial=true;pseudo=true NZ_CP031858.1 Protein Homology CDS 25350 25607 . + 0 ID=cds-D1109_RS00155;Parent=gene-D1109_RS00155;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=25607,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019335.2;locus_tag=D1109_RS00155;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP031858.1 RefSeq pseudogene 27207 28397 . + . ID=gene-D1109_RS00160;Name=D1109_RS00160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D1109_RS00160;partial=true;pseudo=true;start_range=.,27207 NZ_CP031858.1 Protein Homology CDS 27207 28397 . + 0 ID=cds-D1109_RS00160;Parent=gene-D1109_RS00160;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005607392.1;locus_tag=D1109_RS00160;partial=true;product=ATP-binding cassette domain-containing protein;pseudo=true;start_range=.,27207;transl_table=11 NZ_CP031858.1 RefSeq gene 28662 29378 . + . ID=gene-D1109_RS00165;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=D1109_RS00165;old_locus_tag=D1109_00140 NZ_CP031858.1 Protein Homology CDS 28662 29378 . + 0 ID=cds-WP_005603942.1;Parent=gene-D1109_RS00165;Dbxref=Genbank:WP_005603942.1;Name=WP_005603942.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsB;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991581.1;locus_tag=D1109_RS00165;product=30S ribosomal protein S2;protein_id=WP_005603942.1;transl_table=11 NZ_CP031858.1 RefSeq gene 29474 30325 . + . ID=gene-D1109_RS00170;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=D1109_RS00170;old_locus_tag=D1109_00145 NZ_CP031858.1 Protein Homology CDS 29474 30325 . + 0 ID=cds-WP_005603944.1;Parent=gene-D1109_RS00170;Dbxref=Genbank:WP_005603944.1;Name=WP_005603944.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011609244.1;locus_tag=D1109_RS00170;product=translation elongation factor Ts;protein_id=WP_005603944.1;transl_table=11 NZ_CP031858.1 RefSeq gene 30455 32008 . - . ID=gene-D1109_RS00175;Name=D1109_RS00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00175;old_locus_tag=D1109_00150 NZ_CP031858.1 Protein Homology CDS 30455 32008 . - 0 ID=cds-WP_005596785.1;Parent=gene-D1109_RS00175;Dbxref=Genbank:WP_005596785.1;Name=WP_005596785.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012262857.1;locus_tag=D1109_RS00175;product=sulfatase-like hydrolase/transferase;protein_id=WP_005596785.1;transl_table=11 NZ_CP031858.1 RefSeq gene 32120 32833 . + . ID=gene-D1109_RS00180;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=D1109_RS00180;old_locus_tag=D1109_00155 NZ_CP031858.1 Protein Homology CDS 32120 32833 . + 0 ID=cds-WP_005596787.1;Parent=gene-D1109_RS00180;Dbxref=Genbank:WP_005596787.1;Name=WP_005596787.1;Ontology_term=GO:0015949,GO:0033862;gbkey=CDS;gene=pyrH;go_function=UMP kinase activity|0033862||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005614804.1;locus_tag=D1109_RS00180;product=UMP kinase;protein_id=WP_005596787.1;transl_table=11 NZ_CP031858.1 RefSeq gene 33017 33574 . + . ID=gene-D1109_RS00185;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=D1109_RS00185;old_locus_tag=D1109_00160 NZ_CP031858.1 Protein Homology CDS 33017 33574 . + 0 ID=cds-WP_005596791.1;Parent=gene-D1109_RS00185;Dbxref=Genbank:WP_005596791.1;Name=WP_005596791.1;Ontology_term=GO:0006412,GO:0008135;gbkey=CDS;gene=frr;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991577.1;locus_tag=D1109_RS00185;product=ribosome recycling factor;protein_id=WP_005596791.1;transl_table=11 NZ_CP031858.1 RefSeq gene 33652 35040 . - . ID=gene-D1109_RS00190;Name=D1109_RS00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00190;old_locus_tag=D1109_00165 NZ_CP031858.1 Protein Homology CDS 33652 35040 . - 0 ID=cds-WP_237611173.1;Parent=gene-D1109_RS00190;Dbxref=Genbank:WP_237611173.1;Name=WP_237611173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005611780.1;locus_tag=D1109_RS00190;product=PLP-dependent aminotransferase family protein;protein_id=WP_237611173.1;transl_table=11 NZ_CP031858.1 RefSeq gene 35140 36027 . + . ID=gene-D1109_RS00195;Name=pdxS;gbkey=Gene;gene=pdxS;gene_biotype=protein_coding;locus_tag=D1109_RS00195;old_locus_tag=D1109_00170 NZ_CP031858.1 Protein Homology CDS 35140 36027 . + 0 ID=cds-WP_005596795.1;Parent=gene-D1109_RS00195;Dbxref=Genbank:WP_005596795.1;Name=WP_005596795.1;Ontology_term=GO:0042823,GO:0003824;gbkey=CDS;gene=pdxS;go_function=catalytic activity|0003824||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012262859.1;locus_tag=D1109_RS00195;product=pyridoxal 5'-phosphate synthase lyase subunit PdxS;protein_id=WP_005596795.1;transl_table=11 NZ_CP031858.1 RefSeq gene 36027 36602 . + . ID=gene-D1109_RS00200;Name=pdxT;gbkey=Gene;gene=pdxT;gene_biotype=protein_coding;locus_tag=D1109_RS00200;old_locus_tag=D1109_00175 NZ_CP031858.1 Protein Homology CDS 36027 36602 . + 0 ID=cds-WP_058230462.1;Parent=gene-D1109_RS00200;Dbxref=Genbank:WP_058230462.1;Name=WP_058230462.1;Ontology_term=GO:0042823,GO:0016884;gbkey=CDS;gene=pdxT;go_function=carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005611784.1;locus_tag=D1109_RS00200;product=pyridoxal 5'-phosphate synthase glutaminase subunit PdxT;protein_id=WP_058230462.1;transl_table=11 NZ_CP031858.1 RefSeq gene 36676 37266 . - . ID=gene-D1109_RS00205;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=D1109_RS00205;old_locus_tag=D1109_00180 NZ_CP031858.1 Protein Homology CDS 36676 37266 . - 0 ID=cds-WP_005600692.1;Parent=gene-D1109_RS00205;Dbxref=Genbank:WP_005600692.1;Name=WP_005600692.1;Ontology_term=GO:0002100,GO:0008251;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005603949.1;locus_tag=D1109_RS00205;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_005600692.1;transl_table=11 NZ_CP031858.1 RefSeq gene 37283 39142 . - . ID=gene-D1109_RS00210;Name=D1109_RS00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00210;old_locus_tag=D1109_00185 NZ_CP031858.1 Protein Homology CDS 37283 39142 . - 0 ID=cds-WP_005618868.1;Parent=gene-D1109_RS00210;Dbxref=Genbank:WP_005618868.1;Name=WP_005618868.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618868.1;locus_tag=D1109_RS00210;product=DEAD/DEAH box helicase;protein_id=WP_005618868.1;transl_table=11 NZ_CP031858.1 RefSeq gene 39364 40263 . - . ID=gene-D1109_RS00215;Name=nlpI;gbkey=Gene;gene=nlpI;gene_biotype=protein_coding;locus_tag=D1109_RS00215;old_locus_tag=D1109_00190 NZ_CP031858.1 Protein Homology CDS 39364 40263 . - 0 ID=cds-WP_005603953.1;Parent=gene-D1109_RS00215;Dbxref=Genbank:WP_005603953.1;Name=WP_005603953.1;Ontology_term=GO:0005515;gbkey=CDS;gene=nlpI;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005611786.1;locus_tag=D1109_RS00215;product=lipoprotein NlpI;protein_id=WP_005603953.1;transl_table=11 NZ_CP031858.1 RefSeq gene 40366 42513 . - . ID=gene-D1109_RS00220;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=D1109_RS00220;old_locus_tag=D1109_00195 NZ_CP031858.1 Protein Homology CDS 40366 42513 . - 0 ID=cds-WP_005600695.1;Parent=gene-D1109_RS00220;Dbxref=Genbank:WP_005600695.1;Name=WP_005600695.1;Ontology_term=GO:0006402,GO:0004654;gbkey=CDS;gene=pnp;go_function=polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005607403.1;locus_tag=D1109_RS00220;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_005600695.1;transl_table=11 NZ_CP031858.1 RefSeq gene 42815 45061 . + . ID=gene-D1109_RS00225;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=D1109_RS00225;old_locus_tag=D1109_00200 NZ_CP031858.1 Protein Homology CDS 42815 45061 . + 0 ID=cds-WP_237611174.1;Parent=gene-D1109_RS00225;Dbxref=Genbank:WP_237611174.1;Name=WP_237611174.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484645.1;locus_tag=D1109_RS00225;product=DNA topoisomerase IV subunit A;protein_id=WP_237611174.1;transl_table=11 NZ_CP031858.1 RefSeq gene 45201 46532 . + . ID=gene-D1109_RS00230;Name=mukF;gbkey=Gene;gene=mukF;gene_biotype=protein_coding;locus_tag=D1109_RS00230;old_locus_tag=D1109_00210 NZ_CP031858.1 Protein Homology CDS 45201 46532 . + 0 ID=cds-WP_005596809.1;Parent=gene-D1109_RS00230;Dbxref=Genbank:WP_005596809.1;Name=WP_005596809.1;Ontology_term=GO:0007059,GO:0005509;gbkey=CDS;gene=mukF;go_function=calcium ion binding|0005509||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011848432.1;locus_tag=D1109_RS00230;product=chromosome partition protein MukF;protein_id=WP_005596809.1;transl_table=11 NZ_CP031858.1 RefSeq gene 46612 47325 . + . ID=gene-D1109_RS00235;Name=mukE;gbkey=Gene;gene=mukE;gene_biotype=protein_coding;locus_tag=D1109_RS00235;old_locus_tag=D1109_00215 NZ_CP031858.1 Protein Homology CDS 46612 47325 . + 0 ID=cds-WP_005603960.1;Parent=gene-D1109_RS00235;Dbxref=Genbank:WP_005603960.1;Name=WP_005603960.1;Ontology_term=GO:0007059,GO:0030261;gbkey=CDS;gene=mukE;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596811.1;locus_tag=D1109_RS00235;product=chromosome partition protein MukE;protein_id=WP_005603960.1;transl_table=11 NZ_CP031858.1 RefSeq gene 47346 51836 . + . ID=gene-D1109_RS00240;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=D1109_RS00240;old_locus_tag=D1109_00220 NZ_CP031858.1 Protein Homology CDS 47346 51836 . + 0 ID=cds-WP_237611175.1;Parent=gene-D1109_RS00240;Dbxref=Genbank:WP_237611175.1;Name=WP_237611175.1;Ontology_term=GO:0007059,GO:0030261,GO:0003677;gbkey=CDS;gene=mukB;go_function=DNA binding|0003677||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874997.1;locus_tag=D1109_RS00240;product=chromosome partition protein MukB;protein_id=WP_237611175.1;transl_table=11 NZ_CP031858.1 RefSeq gene 51913 53088 . + . ID=gene-D1109_RS00245;Name=D1109_RS00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00245;old_locus_tag=D1109_00225 NZ_CP031858.1 Protein Homology CDS 51913 53088 . + 0 ID=cds-WP_237611176.1;Parent=gene-D1109_RS00245;Dbxref=Genbank:WP_237611176.1;Name=WP_237611176.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618883.1;locus_tag=D1109_RS00245;product=sugar transporter;protein_id=WP_237611176.1;transl_table=11 NZ_CP031858.1 RefSeq gene 53140 54879 . - . ID=gene-D1109_RS00250;Name=D1109_RS00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00250;old_locus_tag=D1109_00230 NZ_CP031858.1 Protein Homology CDS 53140 54879 . - 0 ID=cds-WP_237611177.1;Parent=gene-D1109_RS00250;Dbxref=Genbank:WP_237611177.1;Name=WP_237611177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005607412.1;locus_tag=D1109_RS00250;product=DUF3413 domain-containing protein;protein_id=WP_237611177.1;transl_table=11 NZ_CP031858.1 RefSeq gene 54882 55103 . - . ID=gene-D1109_RS00255;Name=D1109_RS00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00255;old_locus_tag=D1109_00235 NZ_CP031858.1 Protein Homology CDS 54882 55103 . - 0 ID=cds-WP_237611178.1;Parent=gene-D1109_RS00255;Dbxref=Genbank:WP_237611178.1;Name=WP_237611178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005607413.1;locus_tag=D1109_RS00255;product=YejL family protein;protein_id=WP_237611178.1;transl_table=11 NZ_CP031858.1 RefSeq gene 55301 55891 . + . ID=gene-D1109_RS00260;Name=D1109_RS00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00260;old_locus_tag=D1109_00240 NZ_CP031858.1 Protein Homology CDS 55301 55891 . + 0 ID=cds-WP_005596817.1;Parent=gene-D1109_RS00260;Dbxref=Genbank:WP_005596817.1;Name=WP_005596817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596817.1;locus_tag=D1109_RS00260;product=TetR/AcrR family transcriptional regulator;protein_id=WP_005596817.1;transl_table=11 NZ_CP031858.1 RefSeq gene 55924 57129 . + . ID=gene-D1109_RS00265;Name=D1109_RS00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00265;old_locus_tag=D1109_00245 NZ_CP031858.1 Protein Homology CDS 55924 57129 . + 0 ID=cds-WP_005607415.1;Parent=gene-D1109_RS00265;Dbxref=Genbank:WP_005607415.1;Name=WP_005607415.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005614807.1;locus_tag=D1109_RS00265;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_005607415.1;transl_table=11 NZ_CP031858.1 RefSeq gene 57142 60261 . + . ID=gene-D1109_RS00270;Name=D1109_RS00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00270;old_locus_tag=D1109_00250 NZ_CP031858.1 Protein Homology CDS 57142 60261 . + 0 ID=cds-WP_005596820.1;Parent=gene-D1109_RS00270;Dbxref=Genbank:WP_005596820.1;Name=WP_005596820.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600709.1;locus_tag=D1109_RS00270;product=efflux RND transporter permease subunit;protein_id=WP_005596820.1;transl_table=11 NZ_CP031858.1 RefSeq gene 60480 61853 . + . ID=gene-D1109_RS00275;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=D1109_RS00275;old_locus_tag=D1109_00255 NZ_CP031858.1 Protein Homology CDS 60480 61853 . + 0 ID=cds-WP_009874994.1;Parent=gene-D1109_RS00275;Dbxref=Genbank:WP_009874994.1;Name=WP_009874994.1;Ontology_term=GO:0000902,GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=cell morphogenesis|0000902||IEA,UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005611811.1;locus_tag=D1109_RS00275;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_009874994.1;transl_table=11 NZ_CP031858.1 RefSeq gene 61952 62269 . - . ID=gene-D1109_RS00280;Name=D1109_RS00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00280;old_locus_tag=D1109_00260 NZ_CP031858.1 Protein Homology CDS 61952 62269 . - 0 ID=cds-WP_005596827.1;Parent=gene-D1109_RS00280;Dbxref=Genbank:WP_005596827.1;Name=WP_005596827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596827.1;locus_tag=D1109_RS00280;product=CHY zinc finger protein;protein_id=WP_005596827.1;transl_table=11 NZ_CP031858.1 RefSeq gene 62273 62893 . - . ID=gene-D1109_RS00285;Name=D1109_RS00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00285;old_locus_tag=D1109_00265 NZ_CP031858.1 Protein Homology CDS 62273 62893 . - 0 ID=cds-WP_005603976.1;Parent=gene-D1109_RS00285;Dbxref=Genbank:WP_005603976.1;Name=WP_005603976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596829.1;locus_tag=D1109_RS00285;product=DUF1919 domain-containing protein;protein_id=WP_005603976.1;transl_table=11 NZ_CP031858.1 RefSeq gene 63187 64845 . + . ID=gene-D1109_RS00290;Name=D1109_RS00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00290;old_locus_tag=D1109_00270 NZ_CP031858.1 Protein Homology CDS 63187 64845 . + 0 ID=cds-WP_009874993.1;Parent=gene-D1109_RS00290;Dbxref=Genbank:WP_009874993.1;Name=WP_009874993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011848434.1;locus_tag=D1109_RS00290;product=phospho-sugar mutase;protein_id=WP_009874993.1;transl_table=11 NZ_CP031858.1 RefSeq gene 64927 66498 . - . ID=gene-D1109_RS00295;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=D1109_RS00295;old_locus_tag=D1109_00275 NZ_CP031858.1 Protein Homology CDS 64927 66498 . - 0 ID=cds-WP_005596834.1;Parent=gene-D1109_RS00295;Dbxref=Genbank:WP_005596834.1;Name=WP_005596834.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014550523.1;locus_tag=D1109_RS00295;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_005596834.1;transl_table=11 NZ_CP031858.1 RefSeq gene 66513 66827 . - . ID=gene-D1109_RS00300;Name=D1109_RS00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00300;old_locus_tag=D1109_00280 NZ_CP031858.1 Protein Homology CDS 66513 66827 . - 0 ID=cds-WP_005618885.1;Parent=gene-D1109_RS00300;Dbxref=Genbank:WP_005618885.1;Name=WP_005618885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618885.1;locus_tag=D1109_RS00300;product=hypothetical protein;protein_id=WP_005618885.1;transl_table=11 NZ_CP031858.1 RefSeq gene 66917 68380 . - . ID=gene-D1109_RS00305;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=D1109_RS00305;old_locus_tag=D1109_00285 NZ_CP031858.1 Protein Homology CDS 66917 68380 . - 0 ID=cds-WP_043995073.1;Parent=gene-D1109_RS00305;Dbxref=Genbank:WP_043995073.1;Name=WP_043995073.1;Ontology_term=GO:0009152,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005725353.1;locus_tag=D1109_RS00305;product=IMP dehydrogenase;protein_id=WP_043995073.1;transl_table=11 NZ_CP031858.1 RefSeq gene 68633 69259 . + . ID=gene-D1109_RS00310;Name=rlmE;gbkey=Gene;gene=rlmE;gene_biotype=protein_coding;locus_tag=D1109_RS00310;old_locus_tag=D1109_00290 NZ_CP031858.1 Protein Homology CDS 68633 69259 . + 0 ID=cds-WP_005596838.1;Parent=gene-D1109_RS00310;Dbxref=Genbank:WP_005596838.1;Name=WP_005596838.1;Ontology_term=GO:0001510,GO:0006364,GO:0016436;gbkey=CDS;gene=rlmE;go_function=rRNA (uridine) methyltransferase activity|0016436||IEA;go_process=RNA methylation|0001510||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011200140.1;locus_tag=D1109_RS00310;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE;protein_id=WP_005596838.1;transl_table=11 NZ_CP031858.1 RefSeq gene 69363 71285 . + . ID=gene-D1109_RS00315;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=D1109_RS00315;old_locus_tag=D1109_00295 NZ_CP031858.1 Protein Homology CDS 69363 71285 . + 0 ID=cds-WP_237611497.1;Parent=gene-D1109_RS00315;Dbxref=Genbank:WP_237611497.1;Name=WP_237611497.1;Ontology_term=GO:0006508,GO:0051301,GO:0004222,GO:0016887;gbkey=CDS;gene=ftsH;go_function=metalloendopeptidase activity|0004222||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874990.1;locus_tag=D1109_RS00315;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_237611497.1;transl_table=11 NZ_CP031858.1 RefSeq gene 71523 72737 . + . ID=gene-D1109_RS00320;Name=D1109_RS00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00320;old_locus_tag=D1109_00300 NZ_CP031858.1 Protein Homology CDS 71523 72737 . + 0 ID=cds-WP_005596842.1;Parent=gene-D1109_RS00320;Dbxref=Genbank:WP_005596842.1;Name=WP_005596842.1;Ontology_term=GO:0015801,GO:0015173,GO:0005887;gbkey=CDS;go_component=integral component of plasma membrane|0005887||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005607428.1;locus_tag=D1109_RS00320;product=aromatic amino acid transporter;protein_id=WP_005596842.1;transl_table=11 NZ_CP031858.1 RefSeq gene 72833 74050 . + . ID=gene-D1109_RS00325;Name=D1109_RS00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00325;old_locus_tag=D1109_00305 NZ_CP031858.1 Protein Homology CDS 72833 74050 . + 0 ID=cds-WP_005596844.1;Parent=gene-D1109_RS00325;Dbxref=Genbank:WP_005596844.1;Name=WP_005596844.1;Ontology_term=GO:0015801,GO:0015173,GO:0005887;gbkey=CDS;go_component=integral component of plasma membrane|0005887||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018650987.1;locus_tag=D1109_RS00325;product=aromatic amino acid transporter;protein_id=WP_005596844.1;transl_table=11 NZ_CP031858.1 RefSeq gene 74157 76709 . + . ID=gene-D1109_RS00330;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=D1109_RS00330;old_locus_tag=D1109_00310 NZ_CP031858.1 Protein Homology CDS 74157 76709 . + 0 ID=cds-WP_237611179.1;Parent=gene-D1109_RS00330;Dbxref=Genbank:WP_237611179.1;Name=WP_237611179.1;gbkey=CDS;gene=glnD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596845.1;locus_tag=D1109_RS00330;product=bifunctional uridylyltransferase/uridylyl-removing protein GlnD;protein_id=WP_237611179.1;transl_table=11 NZ_CP031858.1 RefSeq gene 76742 77140 . - . ID=gene-D1109_RS00335;Name=D1109_RS00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00335;old_locus_tag=D1109_00315 NZ_CP031858.1 Protein Homology CDS 76742 77140 . - 0 ID=cds-WP_005614828.1;Parent=gene-D1109_RS00335;Dbxref=Genbank:WP_005614828.1;Name=WP_005614828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012262875.1;locus_tag=D1109_RS00335;product=YhcB family protein;protein_id=WP_005614828.1;transl_table=11 NZ_CP031858.1 RefSeq gene 77445 77873 . + . ID=gene-D1109_RS00340;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=D1109_RS00340;old_locus_tag=D1109_00320 NZ_CP031858.1 Protein Homology CDS 77445 77873 . + 0 ID=cds-WP_005596850.1;Parent=gene-D1109_RS00340;Dbxref=Genbank:WP_005596850.1;Name=WP_005596850.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplM;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1;locus_tag=D1109_RS00340;product=50S ribosomal protein L13;protein_id=WP_005596850.1;transl_table=11 NZ_CP031858.1 RefSeq gene 77890 78285 . + . ID=gene-D1109_RS00345;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=D1109_RS00345;old_locus_tag=D1109_00325 NZ_CP031858.1 Protein Homology CDS 77890 78285 . + 0 ID=cds-WP_005596852.1;Parent=gene-D1109_RS00345;Dbxref=Genbank:WP_005596852.1;Name=WP_005596852.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015432457.1;locus_tag=D1109_RS00345;product=30S ribosomal protein S9;protein_id=WP_005596852.1;transl_table=11 NZ_CP031858.1 RefSeq gene 78407 79189 . + . ID=gene-D1109_RS00350;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=D1109_RS00350;old_locus_tag=D1109_00330 NZ_CP031858.1 Protein Homology CDS 78407 79189 . + 0 ID=cds-WP_005607437.1;Parent=gene-D1109_RS00350;Dbxref=Genbank:WP_005607437.1;Name=WP_005607437.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005622827.1;locus_tag=D1109_RS00350;product=peroxide stress protein YaaA;protein_id=WP_005607437.1;transl_table=11 NZ_CP031858.1 RefSeq gene 79189 79734 . + . ID=gene-D1109_RS00355;Name=D1109_RS00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00355;old_locus_tag=D1109_00335 NZ_CP031858.1 Protein Homology CDS 79189 79734 . + 0 ID=cds-WP_005600731.1;Parent=gene-D1109_RS00355;Dbxref=Genbank:WP_005600731.1;Name=WP_005600731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012262877.1;locus_tag=D1109_RS00355;product=hypothetical protein;protein_id=WP_005600731.1;transl_table=11 NZ_CP031858.1 RefSeq gene 79760 80683 . + . ID=gene-D1109_RS00360;Name=D1109_RS00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00360;old_locus_tag=D1109_00340 NZ_CP031858.1 Protein Homology CDS 79760 80683 . + 0 ID=cds-WP_005600733.1;Parent=gene-D1109_RS00360;Dbxref=Genbank:WP_005600733.1;Name=WP_005600733.1;Ontology_term=GO:0006812,GO:0008324,GO:0015562,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=cation transmembrane transporter activity|0008324||IEA,efflux transmembrane transporter activity|0015562||IEA;go_process=cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596858.1;locus_tag=D1109_RS00360;product=cation diffusion facilitator family transporter;protein_id=WP_005600733.1;transl_table=11 NZ_CP031858.1 RefSeq gene 80664 81434 . + . ID=gene-D1109_RS00365;Name=D1109_RS00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00365;old_locus_tag=D1109_00345 NZ_CP031858.1 Protein Homology CDS 80664 81434 . + 0 ID=cds-WP_237611180.1;Parent=gene-D1109_RS00365;Dbxref=Genbank:WP_237611180.1;Name=WP_237611180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596859.1;locus_tag=D1109_RS00365;product=Zn-ribbon-containing protein;protein_id=WP_237611180.1;transl_table=11 NZ_CP031858.1 RefSeq gene 81533 82858 . + . ID=gene-D1109_RS00370;Name=D1109_RS00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00370;old_locus_tag=D1109_00350 NZ_CP031858.1 Protein Homology CDS 81533 82858 . + 0 ID=cds-WP_005607441.1;Parent=gene-D1109_RS00370;Dbxref=Genbank:WP_005607441.1;Name=WP_005607441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005607441.1;locus_tag=D1109_RS00370;product=L-cystine transporter;protein_id=WP_005607441.1;transl_table=11 NZ_CP031858.1 RefSeq gene 82961 83623 . - . ID=gene-D1109_RS00375;Name=D1109_RS00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00375;old_locus_tag=D1109_00355 NZ_CP031858.1 Protein Homology CDS 82961 83623 . - 0 ID=cds-WP_005620853.1;Parent=gene-D1109_RS00375;Dbxref=Genbank:WP_005620853.1;Name=WP_005620853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875387.1;locus_tag=D1109_RS00375;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_005620853.1;transl_table=11 NZ_CP031858.1 RefSeq gene 83900 84886 . + . ID=gene-D1109_RS00380;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=D1109_RS00380;old_locus_tag=D1109_00360 NZ_CP031858.1 Protein Homology CDS 83900 84886 . + 0 ID=cds-WP_005607445.1;Parent=gene-D1109_RS00380;Dbxref=Genbank:WP_005607445.1;Name=WP_005607445.1;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheS;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005607445.1;locus_tag=D1109_RS00380;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_005607445.1;transl_table=11 NZ_CP031858.1 RefSeq gene 84985 87372 . + . ID=gene-D1109_RS00385;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=D1109_RS00385;old_locus_tag=D1109_00365 NZ_CP031858.1 Protein Homology CDS 84985 87372 . + 0 ID=cds-WP_237611181.1;Parent=gene-D1109_RS00385;Dbxref=Genbank:WP_237611181.1;Name=WP_237611181.1;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheT;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012262881.1;locus_tag=D1109_RS00385;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_237611181.1;transl_table=11 NZ_CP031858.1 RefSeq gene 87390 87686 . + . ID=gene-D1109_RS00390;Name=D1109_RS00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00390;old_locus_tag=D1109_00370 NZ_CP031858.1 Protein Homology CDS 87390 87686 . + 0 ID=cds-WP_005596864.1;Parent=gene-D1109_RS00390;Dbxref=Genbank:WP_005596864.1;Name=WP_005596864.1;Ontology_term=GO:0006310,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596864.1;locus_tag=D1109_RS00390;product=integration host factor subunit alpha;protein_id=WP_005596864.1;transl_table=11 NZ_CP031858.1 RefSeq gene 87746 88270 . + . ID=gene-D1109_RS00395;Name=D1109_RS00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00395;old_locus_tag=D1109_00375 NZ_CP031858.1 Protein Homology CDS 87746 88270 . + 0 ID=cds-WP_005596865.1;Parent=gene-D1109_RS00395;Dbxref=Genbank:WP_005596865.1;Name=WP_005596865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005617097.1;locus_tag=D1109_RS00395;product=NlpC/P60 family protein;protein_id=WP_005596865.1;transl_table=11 NZ_CP031858.1 RefSeq gene 88543 89876 . - . ID=gene-D1109_RS00400;Name=D1109_RS00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00400;old_locus_tag=D1109_00380 NZ_CP031858.1 Protein Homology CDS 89423 89876 . - 0 ID=cds-WP_237611182.1;Parent=gene-D1109_RS00400;Dbxref=Genbank:WP_237611182.1;Name=WP_237611182.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612109.1;locus_tag=D1109_RS00400;product=IS3 family transposase;protein_id=WP_237611182.1;transl_table=11 NZ_CP031858.1 Protein Homology CDS 88543 89423 . - 2 ID=cds-WP_237611182.1;Parent=gene-D1109_RS00400;Dbxref=Genbank:WP_237611182.1;Name=WP_237611182.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612109.1;locus_tag=D1109_RS00400;product=IS3 family transposase;protein_id=WP_237611182.1;transl_table=11 NZ_CP031858.1 RefSeq gene 89949 90668 . - . ID=gene-D1109_RS00405;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=D1109_RS00405;old_locus_tag=D1109_00385 NZ_CP031858.1 Protein Homology CDS 89949 90668 . - 0 ID=cds-WP_005596872.1;Parent=gene-D1109_RS00405;Dbxref=Genbank:WP_005596872.1;Name=WP_005596872.1;Ontology_term=GO:0009102,GO:0004141;gbkey=CDS;gene=bioD;go_function=dethiobiotin synthase activity|0004141||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596872.1;locus_tag=D1109_RS00405;product=dethiobiotin synthase;protein_id=WP_005596872.1;transl_table=11 NZ_CP031858.1 RefSeq gene 90722 91912 . - . ID=gene-D1109_RS00410;Name=D1109_RS00410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00410;old_locus_tag=D1109_00390 NZ_CP031858.1 Protein Homology CDS 90722 91912 . - 0 ID=cds-WP_005596873.1;Parent=gene-D1109_RS00410;Dbxref=Genbank:WP_005596873.1;Name=WP_005596873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005617118.1;locus_tag=D1109_RS00410;product=ROK family protein;protein_id=WP_005596873.1;transl_table=11 NZ_CP031858.1 RefSeq gene 92091 93206 . + . ID=gene-D1109_RS00415;Name=rnd;gbkey=Gene;gene=rnd;gene_biotype=protein_coding;locus_tag=D1109_RS00415;old_locus_tag=D1109_00395 NZ_CP031858.1 Protein Homology CDS 92091 93206 . + 0 ID=cds-WP_005604012.1;Parent=gene-D1109_RS00415;Dbxref=Genbank:WP_005604012.1;Name=WP_005604012.1;Ontology_term=GO:0006396,GO:0016891;gbkey=CDS;gene=rnd;go_function=endoribonuclease activity%2C producing 5'-phosphomonoesters|0016891||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005611866.1;locus_tag=D1109_RS00415;product=ribonuclease D;protein_id=WP_005604012.1;transl_table=11 NZ_CP031858.1 RefSeq gene 93291 93773 . + . ID=gene-D1109_RS00420;Name=lrp;gbkey=Gene;gene=lrp;gene_biotype=protein_coding;locus_tag=D1109_RS00420;old_locus_tag=D1109_00400 NZ_CP031858.1 Protein Homology CDS 93291 93773 . + 0 ID=cds-WP_005596879.1;Parent=gene-D1109_RS00420;Dbxref=Genbank:WP_005596879.1;Name=WP_005596879.1;gbkey=CDS;gene=lrp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005695827.1;locus_tag=D1109_RS00420;product=leucine-responsive transcriptional regulator Lrp;protein_id=WP_005596879.1;transl_table=11 NZ_CP031858.1 RefSeq gene 93785 96655 . + . ID=gene-D1109_RS00425;Name=D1109_RS00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00425;old_locus_tag=D1109_00405 NZ_CP031858.1 Protein Homology CDS 93785 96655 . + 0 ID=cds-WP_005607468.1;Parent=gene-D1109_RS00425;Dbxref=Genbank:WP_005607468.1;Name=WP_005607468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875390.1;locus_tag=D1109_RS00425;product=DNA translocase FtsK;protein_id=WP_005607468.1;transl_table=11 NZ_CP031858.1 RefSeq gene 96840 97694 . + . ID=gene-D1109_RS00430;Name=D1109_RS00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00430;old_locus_tag=D1109_00410 NZ_CP031858.1 Protein Homology CDS 96840 97694 . + 0 ID=cds-WP_237611183.1;Parent=gene-D1109_RS00430;Dbxref=Genbank:WP_237611183.1;Name=WP_237611183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600761.1;locus_tag=D1109_RS00430;product=neutral zinc metallopeptidase;protein_id=WP_237611183.1;transl_table=11 NZ_CP031858.1 RefSeq gene 97817 98890 . + . ID=gene-D1109_RS00435;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=protein_coding;locus_tag=D1109_RS00435;old_locus_tag=D1109_00415 NZ_CP031858.1 Protein Homology CDS 97817 98890 . + 0 ID=cds-WP_005596886.1;Parent=gene-D1109_RS00435;Dbxref=Genbank:WP_005596886.1;Name=WP_005596886.1;Ontology_term=GO:0009073,GO:0003849;gbkey=CDS;gene=aroG;go_function=3-deoxy-7-phosphoheptulonate synthase activity|0003849||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596886.1;locus_tag=D1109_RS00435;product=3-deoxy-7-phosphoheptulonate synthase AroG;protein_id=WP_005596886.1;transl_table=11 NZ_CP031858.1 RefSeq gene 98994 99686 . + . ID=gene-D1109_RS00440;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=D1109_RS00440;old_locus_tag=D1109_00420 NZ_CP031858.1 Protein Homology CDS 98994 99686 . + 0 ID=cds-WP_237611184.1;Parent=gene-D1109_RS00440;Dbxref=Genbank:WP_237611184.1;Name=WP_237611184.1;Ontology_term=GO:0006400,GO:0003725;gbkey=CDS;gene=tsaB;go_function=double-stranded RNA binding|0003725||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875421.1;locus_tag=D1109_RS00440;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_237611184.1;transl_table=11 NZ_CP031858.1 RefSeq gene 100127 100708 . - . ID=gene-D1109_RS00445;Name=D1109_RS00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00445;old_locus_tag=D1109_00425 NZ_CP031858.1 Protein Homology CDS 100127 100708 . - 0 ID=cds-WP_005611873.1;Parent=gene-D1109_RS00445;Dbxref=Genbank:WP_005611873.1;Name=WP_005611873.1;Ontology_term=GO:0004797,GO:0005524;gbkey=CDS;go_function=thymidine kinase activity|0004797||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249014.1;locus_tag=D1109_RS00445;product=thymidine kinase;protein_id=WP_005611873.1;transl_table=11 NZ_CP031858.1 RefSeq gene 100768 100986 . - . ID=gene-D1109_RS00450;Name=zapB;gbkey=Gene;gene=zapB;gene_biotype=protein_coding;locus_tag=D1109_RS00450;old_locus_tag=D1109_00430 NZ_CP031858.1 Protein Homology CDS 100768 100986 . - 0 ID=cds-WP_005596893.1;Parent=gene-D1109_RS00450;Dbxref=Genbank:WP_005596893.1;Name=WP_005596893.1;gbkey=CDS;gene=zapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018650966.1;locus_tag=D1109_RS00450;product=cell division protein ZapB;protein_id=WP_005596893.1;transl_table=11 NZ_CP031858.1 RefSeq gene 101171 102169 . + . ID=gene-D1109_RS00455;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=D1109_RS00455;old_locus_tag=D1109_00435 NZ_CP031858.1 Protein Homology CDS 101171 102169 . + 0 ID=cds-WP_005607472.1;Parent=gene-D1109_RS00455;Dbxref=Genbank:WP_005607472.1;Name=WP_005607472.1;Ontology_term=GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018650965.1;locus_tag=D1109_RS00455;product=class II fructose-bisphosphatase;protein_id=WP_005607472.1;transl_table=11 NZ_CP031858.1 RefSeq gene 102232 103005 . - . ID=gene-D1109_RS00460;Name=D1109_RS00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00460;old_locus_tag=D1109_00440 NZ_CP031858.1 Protein Homology CDS 102232 103005 . - 0 ID=cds-WP_005604026.1;Parent=gene-D1109_RS00460;Dbxref=Genbank:WP_005604026.1;Name=WP_005604026.1;Ontology_term=GO:0008150,GO:0051540;gbkey=CDS;go_function=metal cluster binding|0051540||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604026.1;locus_tag=D1109_RS00460;product=Nif3-like dinuclear metal center hexameric protein;protein_id=WP_005604026.1;transl_table=11 NZ_CP031858.1 RefSeq gene 103097 105019 . - . ID=gene-D1109_RS00465;Name=D1109_RS00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00465;old_locus_tag=D1109_00445 NZ_CP031858.1 Protein Homology CDS 103097 105019 . - 0 ID=cds-WP_005596899.1;Parent=gene-D1109_RS00465;Dbxref=Genbank:WP_005596899.1;Name=WP_005596899.1;Ontology_term=GO:0005524,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011200304.1;locus_tag=D1109_RS00465;product=MacB family efflux pump subunit;protein_id=WP_005596899.1;transl_table=11 NZ_CP031858.1 RefSeq gene 105164 106564 . - . ID=gene-D1109_RS00470;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=D1109_RS00470;old_locus_tag=D1109_00450 NZ_CP031858.1 Protein Homology CDS 105164 106564 . - 0 ID=cds-WP_005600774.1;Parent=gene-D1109_RS00470;Dbxref=Genbank:WP_005600774.1;Name=WP_005600774.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=cpxA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596904.1;locus_tag=D1109_RS00470;product=envelope stress sensor histidine kinase CpxA;protein_id=WP_005600774.1;transl_table=11 NZ_CP031858.1 RefSeq gene 106629 107357 . - . ID=gene-D1109_RS00475;Name=D1109_RS00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00475;old_locus_tag=D1109_00455 NZ_CP031858.1 Protein Homology CDS 106629 107357 . - 0 ID=cds-WP_005607482.1;Parent=gene-D1109_RS00475;Dbxref=Genbank:WP_005607482.1;Name=WP_005607482.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018650961.1;locus_tag=D1109_RS00475;product=response regulator;protein_id=WP_005607482.1;transl_table=11 NZ_CP031858.1 RefSeq gene 107451 108230 . - . ID=gene-D1109_RS00480;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=D1109_RS00480;old_locus_tag=D1109_00460 NZ_CP031858.1 Protein Homology CDS 107451 108230 . - 0 ID=cds-WP_005600778.1;Parent=gene-D1109_RS00480;Dbxref=Genbank:WP_005600778.1;Name=WP_005600778.1;gbkey=CDS;gene=mazG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600778.1;locus_tag=D1109_RS00480;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_005600778.1;transl_table=11 NZ_CP031858.1 RefSeq gene 108569 109462 . + . ID=gene-D1109_RS00485;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=D1109_RS00485;old_locus_tag=D1109_00465 NZ_CP031858.1 Protein Homology CDS 108569 109462 . + 0 ID=cds-WP_005596910.1;Parent=gene-D1109_RS00485;Dbxref=Genbank:WP_005596910.1;Name=WP_005596910.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604033.1;locus_tag=D1109_RS00485;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_005596910.1;transl_table=11 NZ_CP031858.1 RefSeq gene 109519 110823 . + . ID=gene-D1109_RS00490;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=D1109_RS00490;old_locus_tag=D1109_00470 NZ_CP031858.1 Protein Homology CDS 109519 110823 . + 0 ID=cds-WP_237611185.1;Parent=gene-D1109_RS00490;Dbxref=Genbank:WP_237611185.1;Name=WP_237611185.1;Ontology_term=GO:0009396,GO:0004326,GO:0005524,GO:0016874;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005617132.1;locus_tag=D1109_RS00490;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=WP_237611185.1;transl_table=11 NZ_CP031858.1 RefSeq gene 110910 110986 . + . ID=gene-D1109_RS00495;Name=D1109_RS00495;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS00495;old_locus_tag=D1109_00475 NZ_CP031858.1 tRNAscan-SE tRNA 110910 110986 . + . ID=rna-D1109_RS00495;Parent=gene-D1109_RS00495;anticodon=(pos:110944..110946);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS00495;product=tRNA-Met NZ_CP031858.1 tRNAscan-SE exon 110910 110986 . + . ID=exon-D1109_RS00495-1;Parent=rna-D1109_RS00495;anticodon=(pos:110944..110946);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS00495;product=tRNA-Met NZ_CP031858.1 RefSeq gene 111207 111668 . + . ID=gene-D1109_RS00500;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=D1109_RS00500;old_locus_tag=D1109_00480 NZ_CP031858.1 Protein Homology CDS 111207 111668 . + 0 ID=cds-WP_005604037.1;Parent=gene-D1109_RS00500;Dbxref=Genbank:WP_005604037.1;Name=WP_005604037.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018650956.1;locus_tag=D1109_RS00500;product=ribosome maturation factor RimP;protein_id=WP_005604037.1;transl_table=11 NZ_CP031858.1 RefSeq gene 111685 113166 . + . ID=gene-D1109_RS00505;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=D1109_RS00505;old_locus_tag=D1109_00485 NZ_CP031858.1 Protein Homology CDS 111685 113166 . + 0 ID=cds-WP_005600784.1;Parent=gene-D1109_RS00505;Dbxref=Genbank:WP_005600784.1;Name=WP_005600784.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusA;go_process=DNA-templated transcription%2C termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005614874.1;locus_tag=D1109_RS00505;product=transcription termination factor NusA;protein_id=WP_005600784.1;transl_table=11 NZ_CP031858.1 RefSeq gene 113188 115680 . + . ID=gene-D1109_RS00510;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=D1109_RS00510;old_locus_tag=D1109_00490 NZ_CP031858.1 Protein Homology CDS 113188 115680 . + 0 ID=cds-WP_005611889.1;Parent=gene-D1109_RS00510;Dbxref=Genbank:WP_005611889.1;Name=WP_005611889.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infB;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600786.1;locus_tag=D1109_RS00510;product=translation initiation factor IF-2;protein_id=WP_005611889.1;transl_table=11 NZ_CP031858.1 RefSeq gene 115852 116235 . + . ID=gene-D1109_RS00515;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=D1109_RS00515;old_locus_tag=D1109_00495 NZ_CP031858.1 Protein Homology CDS 115852 116235 . + 0 ID=cds-WP_005596920.1;Parent=gene-D1109_RS00515;Dbxref=Genbank:WP_005596920.1;Name=WP_005596920.1;Ontology_term=GO:0006396,GO:0019843;gbkey=CDS;gene=rbfA;go_function=rRNA binding|0019843||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596920.1;locus_tag=D1109_RS00515;product=30S ribosome-binding factor RbfA;protein_id=WP_005596920.1;transl_table=11 NZ_CP031858.1 RefSeq gene 116236 117153 . + . ID=gene-D1109_RS00520;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=D1109_RS00520;old_locus_tag=D1109_00500 NZ_CP031858.1 Protein Homology CDS 116236 117153 . + 0 ID=cds-WP_237611186.1;Parent=gene-D1109_RS00520;Dbxref=Genbank:WP_237611186.1;Name=WP_237611186.1;Ontology_term=GO:0006400,GO:0004730;gbkey=CDS;gene=truB;go_function=pseudouridylate synthase activity|0004730||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005607489.1;locus_tag=D1109_RS00520;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_237611186.1;transl_table=11 NZ_CP031858.1 RefSeq gene 117199 118287 . + . ID=gene-D1109_RS00525;Name=D1109_RS00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00525;old_locus_tag=D1109_00505 NZ_CP031858.1 Protein Homology CDS 117199 118287 . + 0 ID=cds-WP_237611187.1;Parent=gene-D1109_RS00525;Dbxref=Genbank:WP_237611187.1;Name=WP_237611187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012262894.1;locus_tag=D1109_RS00525;product=lytic murein transglycosylase;protein_id=WP_237611187.1;transl_table=11 NZ_CP031858.1 RefSeq gene 118416 118601 . + . ID=gene-D1109_RS00530;Name=D1109_RS00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00530;old_locus_tag=D1109_00510 NZ_CP031858.1 Protein Homology CDS 118416 118601 . + 0 ID=cds-WP_005596927.1;Parent=gene-D1109_RS00530;Dbxref=Genbank:WP_005596927.1;Name=WP_005596927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596927.1;locus_tag=D1109_RS00530;product=DUF1508 domain-containing protein;protein_id=WP_005596927.1;transl_table=11 NZ_CP031858.1 RefSeq gene 118720 120858 . - . ID=gene-D1109_RS00535;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=D1109_RS00535;old_locus_tag=D1109_00515 NZ_CP031858.1 Protein Homology CDS 118720 120858 . - 0 ID=cds-WP_005604046.1;Parent=gene-D1109_RS00535;Dbxref=Genbank:WP_005604046.1;Name=WP_005604046.1;Ontology_term=GO:0016407;gbkey=CDS;gene=pta;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596929.1;locus_tag=D1109_RS00535;product=phosphate acetyltransferase;protein_id=WP_005604046.1;transl_table=11 NZ_CP031858.1 RefSeq gene 120914 122122 . - . ID=gene-D1109_RS00540;Name=D1109_RS00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00540;old_locus_tag=D1109_00520 NZ_CP031858.1 Protein Homology CDS 120914 122122 . - 0 ID=cds-WP_005596931.1;Parent=gene-D1109_RS00540;Dbxref=Genbank:WP_005596931.1;Name=WP_005596931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011848442.1;locus_tag=D1109_RS00540;product=acetate kinase;protein_id=WP_005596931.1;transl_table=11 NZ_CP031858.1 RefSeq gene 122419 124395 . + . ID=gene-D1109_RS00545;Name=cpdB;gbkey=Gene;gene=cpdB;gene_biotype=protein_coding;locus_tag=D1109_RS00545;old_locus_tag=D1109_00525 NZ_CP031858.1 Protein Homology CDS 122419 124395 . + 0 ID=cds-WP_237611188.1;Parent=gene-D1109_RS00545;Dbxref=Genbank:WP_237611188.1;Name=WP_237611188.1;Ontology_term=GO:0006139,GO:0008663,GO:0009897,GO:0030288;gbkey=CDS;gene=cpdB;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA;go_function=2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase activity|0008663||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012478411.1;locus_tag=D1109_RS00545;product=2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase;protein_id=WP_237611188.1;transl_table=11 NZ_CP031858.1 RefSeq gene 124465 125046 . - . ID=gene-D1109_RS00550;Name=D1109_RS00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00550;old_locus_tag=D1109_00530 NZ_CP031858.1 Protein Homology CDS 124465 125046 . - 0 ID=cds-WP_237611189.1;Parent=gene-D1109_RS00550;Dbxref=Genbank:WP_237611189.1;Name=WP_237611189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005614895.1;locus_tag=D1109_RS00550;product=nicotinate phosphoribosyltransferase;protein_id=WP_237611189.1;transl_table=11 NZ_CP031858.1 RefSeq gene 125340 126416 . - . ID=gene-D1109_RS00555;Name=D1109_RS00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00555;old_locus_tag=D1109_00535 NZ_CP031858.1 Protein Homology CDS 125340 126416 . - 0 ID=cds-WP_012262896.1;Parent=gene-D1109_RS00555;Dbxref=Genbank:WP_012262896.1;Name=WP_012262896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012478413.1;locus_tag=D1109_RS00555;product=porin;protein_id=WP_012262896.1;transl_table=11 NZ_CP031858.1 RefSeq gene 126886 127407 . + . ID=gene-D1109_RS00560;Name=D1109_RS00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00560;old_locus_tag=D1109_00540 NZ_CP031858.1 Protein Homology CDS 126886 127407 . + 0 ID=cds-WP_005611894.1;Parent=gene-D1109_RS00560;Dbxref=Genbank:WP_005611894.1;Name=WP_005611894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005607496.1;locus_tag=D1109_RS00560;product=primosomal replication protein;protein_id=WP_005611894.1;transl_table=11 NZ_CP031858.1 RefSeq gene 127439 128326 . - . ID=gene-D1109_RS00565;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=D1109_RS00565;old_locus_tag=D1109_00545 NZ_CP031858.1 Protein Homology CDS 127439 128326 . - 0 ID=cds-WP_005600805.1;Parent=gene-D1109_RS00565;Dbxref=Genbank:WP_005600805.1;Name=WP_005600805.1;Ontology_term=GO:0009225,GO:0003983;gbkey=CDS;gene=galU;go_function=UTP:glucose-1-phosphate uridylyltransferase activity|0003983||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652974.1;locus_tag=D1109_RS00565;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_005600805.1;transl_table=11 NZ_CP031858.1 RefSeq gene 128439 129797 . - . ID=gene-D1109_RS00570;Name=D1109_RS00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00570;old_locus_tag=D1109_00550 NZ_CP031858.1 Protein Homology CDS 128439 129797 . - 0 ID=cds-WP_005596944.1;Parent=gene-D1109_RS00570;Dbxref=Genbank:WP_005596944.1;Name=WP_005596944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001350528.1;locus_tag=D1109_RS00570;product=phosphomannomutase/phosphoglucomutase;protein_id=WP_005596944.1;transl_table=11 NZ_CP031858.1 RefSeq gene 129832 130026 . - . ID=gene-D1109_RS00575;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=D1109_RS00575;old_locus_tag=D1109_00555 NZ_CP031858.1 Protein Homology CDS 129832 130026 . - 0 ID=cds-WP_005596946.1;Parent=gene-D1109_RS00575;Dbxref=Genbank:WP_005596946.1;Name=WP_005596946.1;Ontology_term=GO:0006109,GO:0006402;gbkey=CDS;gene=csrA;go_process=regulation of carbohydrate metabolic process|0006109||IEA,mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596946.1;locus_tag=D1109_RS00575;product=carbon storage regulator CsrA;protein_id=WP_005596946.1;transl_table=11 NZ_CP031858.1 RefSeq gene 130105 132729 . - . ID=gene-D1109_RS00580;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=D1109_RS00580;old_locus_tag=D1109_00560 NZ_CP031858.1 Protein Homology CDS 130105 132729 . - 0 ID=cds-WP_005614906.1;Parent=gene-D1109_RS00580;Dbxref=Genbank:WP_005614906.1;Name=WP_005614906.1;Ontology_term=GO:0006419,GO:0004813;gbkey=CDS;gene=alaS;go_function=alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005622703.1;locus_tag=D1109_RS00580;product=alanine--tRNA ligase;protein_id=WP_005614906.1;transl_table=11 NZ_CP031858.1 RefSeq gene 132955 133380 . - . ID=gene-D1109_RS00585;Name=D1109_RS00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00585;old_locus_tag=D1109_00565 NZ_CP031858.1 Protein Homology CDS 132955 133380 . - 0 ID=cds-WP_005596950.1;Parent=gene-D1109_RS00585;Dbxref=Genbank:WP_005596950.1;Name=WP_005596950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252799.1;locus_tag=D1109_RS00585;product=universal stress protein;protein_id=WP_005596950.1;transl_table=11 NZ_CP031858.1 RefSeq gene 133644 134411 . + . ID=gene-D1109_RS00590;Name=D1109_RS00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00590;old_locus_tag=D1109_00570 NZ_CP031858.1 Protein Homology CDS 133644 134411 . + 0 ID=cds-WP_005619781.1;Parent=gene-D1109_RS00590;Dbxref=Genbank:WP_005619781.1;Name=WP_005619781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005619781.1;locus_tag=D1109_RS00590;product=FNR family transcription factor;protein_id=WP_005619781.1;transl_table=11 NZ_CP031858.1 RefSeq gene 134510 134926 . - . ID=gene-D1109_RS00595;Name=D1109_RS00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00595;old_locus_tag=D1109_00575 NZ_CP031858.1 Protein Homology CDS 134510 134926 . - 0 ID=cds-WP_005596955.1;Parent=gene-D1109_RS00595;Dbxref=Genbank:WP_005596955.1;Name=WP_005596955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604075.1;locus_tag=D1109_RS00595;product=ClpXP protease specificity-enhancing factor;protein_id=WP_005596955.1;transl_table=11 NZ_CP031858.1 RefSeq gene 134926 135570 . - . ID=gene-D1109_RS00600;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=D1109_RS00600;old_locus_tag=D1109_00580 NZ_CP031858.1 Protein Homology CDS 134926 135570 . - 0 ID=cds-WP_005619778.1;Parent=gene-D1109_RS00600;Dbxref=Genbank:WP_005619778.1;Name=WP_005619778.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=sspA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874695.1;locus_tag=D1109_RS00600;product=stringent starvation protein A;protein_id=WP_005619778.1;transl_table=11 NZ_CP031858.1 RefSeq gene 135789 136283 . + . ID=gene-D1109_RS00605;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=D1109_RS00605;old_locus_tag=D1109_00585 NZ_CP031858.1 Protein Homology CDS 135789 136283 . + 0 ID=cds-WP_005600812.1;Parent=gene-D1109_RS00605;Dbxref=Genbank:WP_005600812.1;Name=WP_005600812.1;Ontology_term=GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600812.1;locus_tag=D1109_RS00605;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_005600812.1;transl_table=11 NZ_CP031858.1 RefSeq gene 136293 137258 . + . ID=gene-D1109_RS00610;Name=D1109_RS00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00610;old_locus_tag=D1109_00590 NZ_CP031858.1 Protein Homology CDS 136293 137258 . + 0 ID=cds-WP_237611190.1;Parent=gene-D1109_RS00610;Dbxref=Genbank:WP_237611190.1;Name=WP_237611190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005607504.1;locus_tag=D1109_RS00610;product=asparaginase;protein_id=WP_237611190.1;transl_table=11 NZ_CP031858.1 RefSeq gene 137369 138457 . + . ID=gene-D1109_RS00615;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=D1109_RS00615;old_locus_tag=D1109_00595 NZ_CP031858.1 Protein Homology CDS 137369 138457 . + 0 ID=cds-WP_005607506.1;Parent=gene-D1109_RS00615;Dbxref=Genbank:WP_005607506.1;Name=WP_005607506.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012262901.1;locus_tag=D1109_RS00615;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_005607506.1;transl_table=11 NZ_CP031858.1 RefSeq gene 138595 139785 . + . ID=gene-D1109_RS00620;Name=D1109_RS00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00620;old_locus_tag=D1109_00600 NZ_CP031858.1 Protein Homology CDS 138595 139785 . + 0 ID=cds-WP_193345457.1;Parent=gene-D1109_RS00620;Dbxref=Genbank:WP_193345457.1;Name=WP_193345457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000462687.1;locus_tag=D1109_RS00620;product=aspartate/tyrosine/aromatic aminotransferase;protein_id=WP_193345457.1;transl_table=11 NZ_CP031858.1 RefSeq gene 139903 140943 . + . ID=gene-D1109_RS00625;Name=D1109_RS00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00625;old_locus_tag=D1109_00605 NZ_CP031858.1 Protein Homology CDS 139903 140943 . + 0 ID=cds-WP_005603118.1;Parent=gene-D1109_RS00625;Dbxref=Genbank:WP_005603118.1;Name=WP_005603118.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015587011.1;locus_tag=D1109_RS00625;product=IS481 family transposase;protein_id=WP_005603118.1;transl_table=11 NZ_CP031858.1 RefSeq gene 141052 142338 . - . ID=gene-D1109_RS00630;Name=pepP;gbkey=Gene;gene=pepP;gene_biotype=protein_coding;locus_tag=D1109_RS00630;old_locus_tag=D1109_00610 NZ_CP031858.1 Protein Homology CDS 141052 142338 . - 0 ID=cds-WP_237611191.1;Parent=gene-D1109_RS00630;Dbxref=Genbank:WP_237611191.1;Name=WP_237611191.1;Ontology_term=GO:0070006;gbkey=CDS;gene=pepP;go_function=metalloaminopeptidase activity|0070006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651907.1;locus_tag=D1109_RS00630;product=Xaa-Pro aminopeptidase;protein_id=WP_237611191.1;transl_table=11 NZ_CP031858.1 RefSeq gene 142747 143970 . - . ID=gene-D1109_RS00635;Name=D1109_RS00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00635;old_locus_tag=D1109_00615 NZ_CP031858.1 Protein Homology CDS 142747 143970 . - 0 ID=cds-WP_237611192.1;Parent=gene-D1109_RS00635;Dbxref=Genbank:WP_237611192.1;Name=WP_237611192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012262907.1;locus_tag=D1109_RS00635;product=ATP-binding protein;protein_id=WP_237611192.1;transl_table=11 NZ_CP031858.1 RefSeq gene 144105 144494 . - . ID=gene-D1109_RS00640;Name=D1109_RS00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00640;old_locus_tag=D1109_00620 NZ_CP031858.1 Protein Homology CDS 144105 144494 . - 0 ID=cds-WP_215577551.1;Parent=gene-D1109_RS00640;Dbxref=Genbank:WP_215577551.1;Name=WP_215577551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604115.1;locus_tag=D1109_RS00640;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_215577551.1;transl_table=11 NZ_CP031858.1 RefSeq gene 144495 144755 . - . ID=gene-D1109_RS00645;Name=D1109_RS00645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00645;old_locus_tag=D1109_00625 NZ_CP031858.1 Protein Homology CDS 144495 144755 . - 0 ID=cds-WP_215577552.1;Parent=gene-D1109_RS00645;Dbxref=Genbank:WP_215577552.1;Name=WP_215577552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604117.1;locus_tag=D1109_RS00645;product=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;protein_id=WP_215577552.1;transl_table=11 NZ_CP031858.1 RefSeq gene 144889 146910 . - . ID=gene-D1109_RS00650;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=D1109_RS00650;old_locus_tag=D1109_00630 NZ_CP031858.1 Protein Homology CDS 144889 146910 . - 0 ID=cds-WP_005617154.1;Parent=gene-D1109_RS00650;Dbxref=Genbank:WP_005617154.1;Name=WP_005617154.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874701.1;locus_tag=D1109_RS00650;product=excinuclease ABC subunit B;protein_id=WP_005617154.1;transl_table=11 NZ_CP031858.1 RefSeq gene 147087 147899 . + . ID=gene-D1109_RS00655;Name=D1109_RS00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00655;old_locus_tag=D1109_00640 NZ_CP031858.1 Protein Homology CDS 147087 147899 . + 0 ID=cds-WP_005604121.1;Parent=gene-D1109_RS00655;Dbxref=Genbank:WP_005604121.1;Name=WP_005604121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604121.1;locus_tag=D1109_RS00655;product=EfeM/EfeO family lipoprotein;protein_id=WP_005604121.1;transl_table=11 NZ_CP031858.1 RefSeq gene 147911 149104 . + . ID=gene-D1109_RS00660;Name=efeB;gbkey=Gene;gene=efeB;gene_biotype=protein_coding;locus_tag=D1109_RS00660;old_locus_tag=D1109_00645 NZ_CP031858.1 Protein Homology CDS 147911 149104 . + 0 ID=cds-WP_237611193.1;Parent=gene-D1109_RS00660;Dbxref=Genbank:WP_237611193.1;Name=WP_237611193.1;Ontology_term=GO:0033212,GO:0004601,GO:0020037;gbkey=CDS;gene=efeB;go_function=peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=iron import into cell|0033212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005614931.1;locus_tag=D1109_RS00660;product=iron uptake transporter deferrochelatase/peroxidase subunit;protein_id=WP_237611193.1;transl_table=11 NZ_CP031858.1 RefSeq gene 149115 149735 . + . ID=gene-D1109_RS00665;Name=D1109_RS00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00665;old_locus_tag=D1109_00650 NZ_CP031858.1 Protein Homology CDS 149115 149735 . + 0 ID=cds-WP_005596976.1;Parent=gene-D1109_RS00665;Dbxref=Genbank:WP_005596976.1;Name=WP_005596976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596976.1;locus_tag=D1109_RS00665;product=hypothetical protein;protein_id=WP_005596976.1;transl_table=11 NZ_CP031858.1 RefSeq gene 149774 150592 . - . ID=gene-D1109_RS00670;Name=D1109_RS00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00670;old_locus_tag=D1109_00655 NZ_CP031858.1 Protein Homology CDS 149774 150592 . - 0 ID=cds-WP_237594208.1;Parent=gene-D1109_RS00670;Dbxref=Genbank:WP_237594208.1;Name=WP_237594208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596978.1;locus_tag=D1109_RS00670;product=PHP domain-containing protein;protein_id=WP_237594208.1;transl_table=11 NZ_CP031858.1 RefSeq gene 150596 151186 . - . ID=gene-D1109_RS00675;Name=D1109_RS00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00675;old_locus_tag=D1109_00660 NZ_CP031858.1 Protein Homology CDS 150596 151186 . - 0 ID=cds-WP_005611913.1;Parent=gene-D1109_RS00675;Dbxref=Genbank:WP_005611913.1;Name=WP_005611913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005611913.1;locus_tag=D1109_RS00675;product=hypothetical protein;protein_id=WP_005611913.1;transl_table=11 NZ_CP031858.1 RefSeq gene 151203 152747 . - . ID=gene-D1109_RS00680;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=D1109_RS00680;old_locus_tag=D1109_00665 NZ_CP031858.1 Protein Homology CDS 151203 152747 . - 0 ID=cds-WP_237611194.1;Parent=gene-D1109_RS00680;Dbxref=Genbank:WP_237611194.1;Name=WP_237611194.1;Ontology_term=GO:0006281,GO:0000175,GO:0003676,GO:0008852;gbkey=CDS;gene=sbcB;go_function=3'-5'-exoribonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA,exodeoxyribonuclease I activity|0008852||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596982.1;locus_tag=D1109_RS00680;product=exodeoxyribonuclease I;protein_id=WP_237611194.1;transl_table=11 NZ_CP031858.1 RefSeq gene 152989 154383 . - . ID=gene-D1109_RS00685;Name=D1109_RS00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00685;old_locus_tag=D1109_00670 NZ_CP031858.1 Protein Homology CDS 152989 154383 . - 0 ID=cds-WP_237611195.1;Parent=gene-D1109_RS00685;Dbxref=Genbank:WP_237611195.1;Name=WP_237611195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005611916.1;locus_tag=D1109_RS00685;product=chloride channel protein;protein_id=WP_237611195.1;transl_table=11 NZ_CP031858.1 RefSeq gene 154591 155994 . + . ID=gene-D1109_RS00690;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=D1109_RS00690;old_locus_tag=D1109_00675 NZ_CP031858.1 Protein Homology CDS 154591 155994 . + 0 ID=cds-WP_005617159.1;Parent=gene-D1109_RS00690;Dbxref=Genbank:WP_005617159.1;Name=WP_005617159.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012054399.1;locus_tag=D1109_RS00690;product=asparagine--tRNA ligase;protein_id=WP_005617159.1;transl_table=11 NZ_CP031858.1 RefSeq gene 156098 157099 . - . ID=gene-D1109_RS00695;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=protein_coding;locus_tag=D1109_RS00695;old_locus_tag=D1109_00680 NZ_CP031858.1 Protein Homology CDS 156098 157099 . - 0 ID=cds-WP_005600857.1;Parent=gene-D1109_RS00695;Dbxref=Genbank:WP_005600857.1;Name=WP_005600857.1;Ontology_term=GO:0072581;gbkey=CDS;gene=epmB;go_process=protein-N6-(L-lysyl)-L-lysine modification to protein-N6-(beta-lysyl)-L-lysine|0072581||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604135.1;locus_tag=D1109_RS00695;product=EF-P beta-lysylation protein EpmB;protein_id=WP_005600857.1;transl_table=11 NZ_CP031858.1 RefSeq gene 157186 157749 . - . ID=gene-D1109_RS00700;Name=D1109_RS00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00700;old_locus_tag=D1109_00685 NZ_CP031858.1 Protein Homology CDS 157186 157749 . - 0 ID=cds-WP_005600858.1;Parent=gene-D1109_RS00700;Dbxref=Genbank:WP_005600858.1;Name=WP_005600858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012262915.1;locus_tag=D1109_RS00700;product=hypothetical protein;protein_id=WP_005600858.1;transl_table=11 NZ_CP031858.1 RefSeq gene 157899 158465 . + . ID=gene-D1109_RS00705;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=D1109_RS00705;old_locus_tag=D1109_00690 NZ_CP031858.1 Protein Homology CDS 157899 158465 . + 0 ID=cds-WP_005600860.1;Parent=gene-D1109_RS00705;Dbxref=Genbank:WP_005600860.1;Name=WP_005600860.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=efp;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005635150.1;locus_tag=D1109_RS00705;product=elongation factor P;protein_id=WP_005600860.1;transl_table=11 NZ_CP031858.1 RefSeq gene 158620 160290 . + . ID=gene-D1109_RS00710;Name=glnS;gbkey=Gene;gene=glnS;gene_biotype=protein_coding;locus_tag=D1109_RS00710;old_locus_tag=D1109_00695 NZ_CP031858.1 Protein Homology CDS 158620 160290 . + 0 ID=cds-WP_237611196.1;Parent=gene-D1109_RS00710;Dbxref=Genbank:WP_237611196.1;Name=WP_237611196.1;Ontology_term=GO:0006425,GO:0004819;gbkey=CDS;gene=glnS;go_function=glutamine-tRNA ligase activity|0004819||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874707.1;locus_tag=D1109_RS00710;product=glutamine--tRNA ligase;protein_id=WP_237611196.1;transl_table=11 NZ_CP031858.1 RefSeq gene 160520 161911 . - . ID=gene-D1109_RS00715;Name=D1109_RS00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00715;old_locus_tag=D1109_00700 NZ_CP031858.1 Protein Homology CDS 160520 161911 . - 0 ID=cds-WP_237611197.1;Parent=gene-D1109_RS00715;Dbxref=Genbank:WP_237611197.1;Name=WP_237611197.1;Ontology_term=GO:0006855,GO:0009410,GO:0005887;gbkey=CDS;go_component=integral component of plasma membrane|0005887||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA,response to xenobiotic stimulus|0009410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012262918.1;locus_tag=D1109_RS00715;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_237611197.1;transl_table=11 NZ_CP031858.1 RefSeq gene 162092 164200 . - . ID=gene-D1109_RS00720;Name=D1109_RS00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00720;old_locus_tag=D1109_00705 NZ_CP031858.1 Protein Homology CDS 162092 164200 . - 0 ID=cds-WP_237611198.1;Parent=gene-D1109_RS00720;Dbxref=Genbank:WP_237611198.1;Name=WP_237611198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005607558.1;locus_tag=D1109_RS00720;product=transglycosylase SLT domain-containing protein;protein_id=WP_237611198.1;transl_table=11 NZ_CP031858.1 RefSeq gene 164309 164848 . - . ID=gene-D1109_RS00725;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=D1109_RS00725;old_locus_tag=D1109_00710 NZ_CP031858.1 Protein Homology CDS 164309 164848 . - 0 ID=cds-WP_005611929.1;Parent=gene-D1109_RS00725;Dbxref=Genbank:WP_005611929.1;Name=WP_005611929.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604148.1;locus_tag=D1109_RS00725;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_005611929.1;transl_table=11 NZ_CP031858.1 RefSeq gene 164952 166088 . - . ID=gene-D1109_RS00730;Name=D1109_RS00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00730;old_locus_tag=D1109_00715 NZ_CP031858.1 Protein Homology CDS 164952 166088 . - 0 ID=cds-WP_043990896.1;Parent=gene-D1109_RS00730;Dbxref=Genbank:WP_043990896.1;Name=WP_043990896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012478416.1;locus_tag=D1109_RS00730;product=methionine biosynthesis PLP-dependent protein;protein_id=WP_043990896.1;transl_table=11 NZ_CP031858.1 RefSeq gene 166202 167011 . - . ID=gene-D1109_RS00735;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=D1109_RS00735;old_locus_tag=D1109_00720 NZ_CP031858.1 Protein Homology CDS 166202 167011 . - 0 ID=cds-WP_005600871.1;Parent=gene-D1109_RS00735;Dbxref=Genbank:WP_005600871.1;Name=WP_005600871.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012340462.1;locus_tag=D1109_RS00735;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_005600871.1;transl_table=11 NZ_CP031858.1 RefSeq gene 167120 168211 . - . ID=gene-D1109_RS00740;Name=rlmM;gbkey=Gene;gene=rlmM;gene_biotype=protein_coding;locus_tag=D1109_RS00740;old_locus_tag=D1109_00725 NZ_CP031858.1 Protein Homology CDS 167120 168211 . - 0 ID=cds-WP_005597011.1;Parent=gene-D1109_RS00740;Dbxref=Genbank:WP_005597011.1;Name=WP_005597011.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmM;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991464.1;locus_tag=D1109_RS00740;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;protein_id=WP_005597011.1;transl_table=11 NZ_CP031858.1 RefSeq gene 168583 168987 . - . ID=gene-D1109_RS00745;Name=D1109_RS00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00745;old_locus_tag=D1109_00730 NZ_CP031858.1 Protein Homology CDS 168583 168987 . - 0 ID=cds-WP_005597015.1;Parent=gene-D1109_RS00745;Dbxref=Genbank:WP_005597015.1;Name=WP_005597015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597015.1;locus_tag=D1109_RS00745;product=DUF423 domain-containing protein;protein_id=WP_005597015.1;transl_table=11 NZ_CP031858.1 RefSeq gene 169091 170782 . + . ID=gene-D1109_RS00750;Name=dld;gbkey=Gene;gene=dld;gene_biotype=protein_coding;locus_tag=D1109_RS00750;old_locus_tag=D1109_00735 NZ_CP031858.1 Protein Homology CDS 169091 170782 . + 0 ID=cds-WP_237586244.1;Parent=gene-D1109_RS00750;Dbxref=Genbank:WP_237586244.1;Name=WP_237586244.1;Ontology_term=GO:0006089,GO:0019516,GO:0016901;gbkey=CDS;gene=dld;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C quinone or similar compound as acceptor|0016901||IEA;go_process=lactate metabolic process|0006089||IEA,lactate oxidation|0019516||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874713.1;locus_tag=D1109_RS00750;product=D-lactate dehydrogenase;protein_id=WP_237586244.1;transl_table=11 NZ_CP031858.1 RefSeq gene 170920 173394 . - . ID=gene-D1109_RS00755;Name=torA;gbkey=Gene;gene=torA;gene_biotype=protein_coding;locus_tag=D1109_RS00755;old_locus_tag=D1109_00740 NZ_CP031858.1 Protein Homology CDS 170920 173394 . - 0 ID=cds-WP_237611199.1;Parent=gene-D1109_RS00755;Dbxref=Genbank:WP_237611199.1;Name=WP_237611199.1;Ontology_term=GO:0030151,GO:0043546,GO:0050626,GO:0042597;gbkey=CDS;gene=torA;go_component=periplasmic space|0042597||IEA;go_function=molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,trimethylamine-N-oxide reductase (cytochrome c) activity|0050626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011848450.1;locus_tag=D1109_RS00755;product=trimethylamine-N-oxide reductase TorA;protein_id=WP_237611199.1;transl_table=11 NZ_CP031858.1 cmsearch riboswitch 173413 173582 . - . ID=id-NZ_CP031858.1:173413..173582;Dbxref=RFAM:RF01055;Note=molybdenum cofactor riboswitch;bound_moiety=molybdenum cofactor;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP031858.1 RefSeq gene 173590 174708 . - . ID=gene-D1109_RS00760;Name=D1109_RS00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00760;old_locus_tag=D1109_00745 NZ_CP031858.1 Protein Homology CDS 173590 174708 . - 0 ID=cds-WP_237611200.1;Parent=gene-D1109_RS00760;Dbxref=Genbank:WP_237611200.1;Name=WP_237611200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604164.1;locus_tag=D1109_RS00760;product=NapC/NirT family cytochrome c;protein_id=WP_237611200.1;transl_table=11 NZ_CP031858.1 cmsearch riboswitch 174882 175069 . + . ID=id-NZ_CP031858.1:174882..175069;Dbxref=RFAM:RF01055;Note=molybdenum cofactor riboswitch;bound_moiety=molybdenum cofactor;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP031858.1 RefSeq gene 175058 176080 . + . ID=gene-D1109_RS00765;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=D1109_RS00765;old_locus_tag=D1109_00750 NZ_CP031858.1 Protein Homology CDS 175058 176080 . + 0 ID=cds-WP_237611201.1;Parent=gene-D1109_RS00765;Dbxref=Genbank:WP_237611201.1;Name=WP_237611201.1;Ontology_term=GO:0006777,GO:0051539;gbkey=CDS;gene=moaA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005607581.1;locus_tag=D1109_RS00765;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_237611201.1;transl_table=11 NZ_CP031858.1 RefSeq gene 176365 176841 . + . ID=gene-D1109_RS00770;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=D1109_RS00770;old_locus_tag=D1109_00755 NZ_CP031858.1 Protein Homology CDS 176365 176841 . + 0 ID=cds-WP_005597027.1;Parent=gene-D1109_RS00770;Dbxref=Genbank:WP_005597027.1;Name=WP_005597027.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaC;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597027.1;locus_tag=D1109_RS00770;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_005597027.1;transl_table=11 NZ_CP031858.1 RefSeq gene 176863 177108 . + . ID=gene-D1109_RS00775;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=D1109_RS00775;old_locus_tag=D1109_00760 NZ_CP031858.1 Protein Homology CDS 176863 177108 . + 0 ID=cds-WP_005597031.1;Parent=gene-D1109_RS00775;Dbxref=Genbank:WP_005597031.1;Name=WP_005597031.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaD;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005631889.1;locus_tag=D1109_RS00775;product=molybdopterin synthase sulfur carrier subunit;protein_id=WP_005597031.1;transl_table=11 NZ_CP031858.1 RefSeq gene 177109 177564 . + . ID=gene-D1109_RS00780;Name=moaE;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;locus_tag=D1109_RS00780;old_locus_tag=D1109_00765 NZ_CP031858.1 Protein Homology CDS 177109 177564 . + 0 ID=cds-WP_005597033.1;Parent=gene-D1109_RS00780;Dbxref=Genbank:WP_005597033.1;Name=WP_005597033.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaE;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597033.1;locus_tag=D1109_RS00780;product=molybdopterin synthase catalytic subunit MoaE;protein_id=WP_005597033.1;transl_table=11 NZ_CP031858.1 RefSeq gene 177645 178136 . + . ID=gene-D1109_RS00785;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=D1109_RS00785;old_locus_tag=D1109_00770 NZ_CP031858.1 Protein Homology CDS 177645 178136 . + 0 ID=cds-WP_005597035.1;Parent=gene-D1109_RS00785;Dbxref=Genbank:WP_005597035.1;Name=WP_005597035.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=ribonuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597035.1;locus_tag=D1109_RS00785;product=rRNA maturation RNase YbeY;protein_id=WP_005597035.1;transl_table=11 NZ_CP031858.1 RefSeq gene 178136 179938 . + . ID=gene-D1109_RS00790;Name=D1109_RS00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00790;old_locus_tag=D1109_00775 NZ_CP031858.1 Protein Homology CDS 178136 179938 . + 0 ID=cds-WP_237611202.1;Parent=gene-D1109_RS00790;Dbxref=Genbank:WP_237611202.1;Name=WP_237611202.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005611951.1;locus_tag=D1109_RS00790;product=GNAT family N-acetyltransferase;protein_id=WP_237611202.1;transl_table=11 NZ_CP031858.1 RefSeq gene 180002 182611 . - . ID=gene-D1109_RS00795;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=D1109_RS00795;old_locus_tag=D1109_00780 NZ_CP031858.1 Protein Homology CDS 180002 182611 . - 0 ID=cds-WP_237611203.1;Parent=gene-D1109_RS00795;Dbxref=Genbank:WP_237611203.1;Name=WP_237611203.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917;gbkey=CDS;gene=topA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000513593.1;locus_tag=D1109_RS00795;product=type I DNA topoisomerase;protein_id=WP_237611203.1;transl_table=11 NZ_CP031858.1 RefSeq gene 182753 183649 . + . ID=gene-D1109_RS00800;Name=D1109_RS00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00800;old_locus_tag=D1109_00785 NZ_CP031858.1 Protein Homology CDS 182753 183649 . + 0 ID=cds-WP_237611204.1;Parent=gene-D1109_RS00800;Dbxref=Genbank:WP_237611204.1;Name=WP_237611204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005614952.1;locus_tag=D1109_RS00800;product=LysR family transcriptional regulator;protein_id=WP_237611204.1;transl_table=11 NZ_CP031858.1 RefSeq gene 183743 185056 . - . ID=gene-D1109_RS00805;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=D1109_RS00805;old_locus_tag=D1109_00790 NZ_CP031858.1 Protein Homology CDS 183743 185056 . - 0 ID=cds-WP_237611205.1;Parent=gene-D1109_RS00805;Dbxref=Genbank:WP_237611205.1;Name=WP_237611205.1;Ontology_term=GO:0006526,GO:0004042;gbkey=CDS;gene=argA;go_function=acetyl-CoA:L-glutamate N-acetyltransferase activity|0004042||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005617196.1;locus_tag=D1109_RS00805;product=amino-acid N-acetyltransferase;protein_id=WP_237611205.1;transl_table=11 NZ_CP031858.1 RefSeq gene 185201 186499 . - . ID=gene-D1109_RS00810;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=D1109_RS00810;old_locus_tag=D1109_00795 NZ_CP031858.1 Protein Homology CDS 185201 186499 . - 0 ID=cds-WP_005597044.1;Parent=gene-D1109_RS00810;Dbxref=Genbank:WP_005597044.1;Name=WP_005597044.1;Ontology_term=GO:0009423,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600893.1;locus_tag=D1109_RS00810;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_005597044.1;transl_table=11 NZ_CP031858.1 RefSeq gene 186513 187607 . - . ID=gene-D1109_RS00815;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=D1109_RS00815;old_locus_tag=D1109_00800 NZ_CP031858.1 Protein Homology CDS 186513 187607 . - 0 ID=cds-WP_237611206.1;Parent=gene-D1109_RS00815;Dbxref=Genbank:WP_237611206.1;Name=WP_237611206.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597048.1;locus_tag=D1109_RS00815;product=histidinol-phosphate transaminase;protein_id=WP_237611206.1;transl_table=11 NZ_CP031858.1 RefSeq gene 187807 189075 . - . ID=gene-D1109_RS00820;Name=D1109_RS00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00820;old_locus_tag=D1109_00805 NZ_CP031858.1 Protein Homology CDS 187807 189075 . - 0 ID=cds-WP_005597053.1;Parent=gene-D1109_RS00820;Dbxref=Genbank:WP_005597053.1;Name=WP_005597053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597053.1;locus_tag=D1109_RS00820;product=O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase;protein_id=WP_005597053.1;transl_table=11 NZ_CP031858.1 RefSeq gene 189281 190369 . - . ID=gene-D1109_RS00825;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=D1109_RS00825;old_locus_tag=D1109_00810 NZ_CP031858.1 Protein Homology CDS 189281 190369 . - 0 ID=cds-WP_009874721.1;Parent=gene-D1109_RS00825;Dbxref=Genbank:WP_009874721.1;Name=WP_009874721.1;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651940.1;locus_tag=D1109_RS00825;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=WP_009874721.1;transl_table=11 NZ_CP031858.1 RefSeq gene 190563 193436 . - . ID=gene-D1109_RS00830;Name=D1109_RS00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00830;old_locus_tag=D1109_00820 NZ_CP031858.1 Protein Homology CDS 190563 193436 . - 0 ID=cds-WP_042655088.1;Parent=gene-D1109_RS00830;Dbxref=Genbank:WP_042655088.1;Name=WP_042655088.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005607599.1;locus_tag=D1109_RS00830;product=SNF2-related protein;protein_id=WP_042655088.1;transl_table=11 NZ_CP031858.1 RefSeq gene 193433 196747 . - . ID=gene-D1109_RS00835;Name=D1109_RS00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00835;old_locus_tag=D1109_00825 NZ_CP031858.1 Protein Homology CDS 193433 196747 . - 0 ID=cds-WP_237611207.1;Parent=gene-D1109_RS00835;Dbxref=Genbank:WP_237611207.1;Name=WP_237611207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005611978.1;locus_tag=D1109_RS00835;product=DEAD/DEAH box helicase family protein;protein_id=WP_237611207.1;transl_table=11 NZ_CP031858.1 RefSeq gene 197148 200027 . - . ID=gene-D1109_RS00840;Name=D1109_RS00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00840;old_locus_tag=D1109_00835 NZ_CP031858.1 Protein Homology CDS 197148 200027 . - 0 ID=cds-WP_237611481.1;Parent=gene-D1109_RS00840;Dbxref=Genbank:WP_237611481.1;Name=WP_237611481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005611981.1;locus_tag=D1109_RS00840;product=site-specific DNA-methyltransferase;protein_id=WP_237611481.1;transl_table=11 NZ_CP031858.1 RefSeq gene 200302 201174 . - . ID=gene-D1109_RS00845;Name=D1109_RS00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00845;old_locus_tag=D1109_00845 NZ_CP031858.1 Protein Homology CDS 200302 201174 . - 0 ID=cds-WP_005597069.1;Parent=gene-D1109_RS00845;Dbxref=Genbank:WP_005597069.1;Name=WP_005597069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597069.1;locus_tag=D1109_RS00845;product=MurR/RpiR family transcriptional regulator;protein_id=WP_005597069.1;transl_table=11 NZ_CP031858.1 RefSeq gene 201184 201651 . - . ID=gene-D1109_RS00850;Name=D1109_RS00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00850;old_locus_tag=D1109_00850 NZ_CP031858.1 Protein Homology CDS 201184 201651 . - 0 ID=cds-WP_005597071.1;Parent=gene-D1109_RS00850;Dbxref=Genbank:WP_005597071.1;Name=WP_005597071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991447.1;locus_tag=D1109_RS00850;product=YhcH/YjgK/YiaL family protein;protein_id=WP_005597071.1;transl_table=11 NZ_CP031858.1 RefSeq gene 201852 203360 . - . ID=gene-D1109_RS00855;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=D1109_RS00855;old_locus_tag=D1109_00855 NZ_CP031858.1 Protein Homology CDS 201852 203360 . - 0 ID=cds-WP_005597073.1;Parent=gene-D1109_RS00855;Dbxref=Genbank:WP_005597073.1;Name=WP_005597073.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005617209.1;locus_tag=D1109_RS00855;product=exopolyphosphatase;protein_id=WP_005597073.1;transl_table=11 NZ_CP031858.1 RefSeq gene 203569 203904 . + . ID=gene-D1109_RS00860;Name=D1109_RS00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00860;old_locus_tag=D1109_00860 NZ_CP031858.1 Protein Homology CDS 203569 203904 . + 0 ID=cds-WP_005600925.1;Parent=gene-D1109_RS00860;Dbxref=Genbank:WP_005600925.1;Name=WP_005600925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600925.1;locus_tag=D1109_RS00860;product=DUF496 family protein;protein_id=WP_005600925.1;transl_table=11 NZ_CP031858.1 cmsearch riboswitch 204119 204301 . + . ID=id-NZ_CP031858.1:204119..204301;Dbxref=RFAM:RF00168;Note=Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis%2C transport and catabolism;bound_moiety=lysine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP031858.1 RefSeq gene 204399 205751 . + . ID=gene-D1109_RS00865;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=D1109_RS00865;old_locus_tag=D1109_00865 NZ_CP031858.1 Protein Homology CDS 204399 205751 . + 0 ID=cds-WP_237611208.1;Parent=gene-D1109_RS00865;Dbxref=Genbank:WP_237611208.1;Name=WP_237611208.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;gene=lysC;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604206.1;locus_tag=D1109_RS00865;product=lysine-sensitive aspartokinase 3;protein_id=WP_237611208.1;transl_table=11 NZ_CP031858.1 RefSeq gene 205877 206326 . - . ID=gene-D1109_RS00870;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=D1109_RS00870;old_locus_tag=D1109_00870 NZ_CP031858.1 Protein Homology CDS 205877 206326 . - 0 ID=cds-WP_005597079.1;Parent=gene-D1109_RS00870;Dbxref=Genbank:WP_005597079.1;Name=WP_005597079.1;Ontology_term=GO:0006355,GO:0140110;gbkey=CDS;gene=nrdR;go_function=transcription regulator activity|0140110||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651946.1;locus_tag=D1109_RS00870;product=transcriptional regulator NrdR;protein_id=WP_005597079.1;transl_table=11 NZ_CP031858.1 RefSeq gene 206326 206613 . - . ID=gene-D1109_RS00875;Name=D1109_RS00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00875;old_locus_tag=D1109_00875 NZ_CP031858.1 Protein Homology CDS 206326 206613 . - 0 ID=cds-WP_005600927.1;Parent=gene-D1109_RS00875;Dbxref=Genbank:WP_005600927.1;Name=WP_005600927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005622950.1;locus_tag=D1109_RS00875;product=YcgL domain-containing protein;protein_id=WP_005600927.1;transl_table=11 NZ_CP031858.1 RefSeq gene 206603 208066 . - . ID=gene-D1109_RS00880;Name=D1109_RS00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00880;old_locus_tag=D1109_00880 NZ_CP031858.1 Protein Homology CDS 206603 208066 . - 0 ID=cds-WP_237611482.1;Parent=gene-D1109_RS00880;Dbxref=Genbank:WP_237611482.1;Name=WP_237611482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250701.1;locus_tag=D1109_RS00880;product=replicative DNA helicase;protein_id=WP_237611482.1;transl_table=11 NZ_CP031858.1 RefSeq gene 208246 209154 . + . ID=gene-D1109_RS00885;Name=D1109_RS00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00885;old_locus_tag=D1109_00885 NZ_CP031858.1 Protein Homology CDS 208246 209154 . + 0 ID=cds-WP_005597086.1;Parent=gene-D1109_RS00885;Dbxref=Genbank:WP_005597086.1;Name=WP_005597086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017357670.1;locus_tag=D1109_RS00885;product=siderophore ABC transporter substrate-binding protein;protein_id=WP_005597086.1;transl_table=11 NZ_CP031858.1 RefSeq gene 209241 210188 . + . ID=gene-D1109_RS00890;Name=D1109_RS00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00890;old_locus_tag=D1109_00890 NZ_CP031858.1 Protein Homology CDS 209241 210188 . + 0 ID=cds-WP_005597088.1;Parent=gene-D1109_RS00890;Dbxref=Genbank:WP_005597088.1;Name=WP_005597088.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005607609.1;locus_tag=D1109_RS00890;product=iron chelate uptake ABC transporter family permease subunit;protein_id=WP_005597088.1;transl_table=11 NZ_CP031858.1 RefSeq gene 210188 211129 . + . ID=gene-D1109_RS00895;Name=D1109_RS00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00895;old_locus_tag=D1109_00895 NZ_CP031858.1 Protein Homology CDS 210188 211129 . + 0 ID=cds-WP_237611209.1;Parent=gene-D1109_RS00895;Dbxref=Genbank:WP_237611209.1;Name=WP_237611209.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618966.1;locus_tag=D1109_RS00895;product=iron chelate uptake ABC transporter family permease subunit;protein_id=WP_237611209.1;transl_table=11 NZ_CP031858.1 RefSeq gene 211131 211889 . + . ID=gene-D1109_RS00900;Name=D1109_RS00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00900;old_locus_tag=D1109_00900 NZ_CP031858.1 Protein Homology CDS 211131 211889 . + 0 ID=cds-WP_005611990.1;Parent=gene-D1109_RS00900;Dbxref=Genbank:WP_005611990.1;Name=WP_005611990.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604228.1;locus_tag=D1109_RS00900;product=ATP-binding cassette domain-containing protein;protein_id=WP_005611990.1;transl_table=11 NZ_CP031858.1 RefSeq gene 212078 212758 . + . ID=gene-D1109_RS00905;Name=D1109_RS00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00905;old_locus_tag=D1109_00905 NZ_CP031858.1 Protein Homology CDS 212078 212758 . + 0 ID=cds-WP_005597094.1;Parent=gene-D1109_RS00905;Dbxref=Genbank:WP_005597094.1;Name=WP_005597094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007523984.1;locus_tag=D1109_RS00905;product=TIGR00153 family protein;protein_id=WP_005597094.1;transl_table=11 NZ_CP031858.1 RefSeq gene 212768 214030 . + . ID=gene-D1109_RS00910;Name=D1109_RS00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00910;old_locus_tag=D1109_00910 NZ_CP031858.1 Protein Homology CDS 212768 214030 . + 0 ID=cds-WP_005600935.1;Parent=gene-D1109_RS00910;Dbxref=Genbank:WP_005600935.1;Name=WP_005600935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597096.1;locus_tag=D1109_RS00910;product=inorganic phosphate transporter;protein_id=WP_005600935.1;transl_table=11 NZ_CP031858.1 RefSeq gene 214094 214699 . + . ID=gene-D1109_RS00915;Name=D1109_RS00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00915;old_locus_tag=D1109_00915 NZ_CP031858.1 Protein Homology CDS 214094 214699 . + 0 ID=cds-WP_005597098.1;Parent=gene-D1109_RS00915;Dbxref=Genbank:WP_005597098.1;Name=WP_005597098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991435.1;locus_tag=D1109_RS00915;product=SH3 domain-containing protein;protein_id=WP_005597098.1;transl_table=11 NZ_CP031858.1 RefSeq gene 214753 214980 . - . ID=gene-D1109_RS00920;Name=D1109_RS00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00920;old_locus_tag=D1109_00920 NZ_CP031858.1 Protein Homology CDS 214753 214980 . - 0 ID=cds-WP_005600938.1;Parent=gene-D1109_RS00920;Dbxref=Genbank:WP_005600938.1;Name=WP_005600938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600938.1;locus_tag=D1109_RS00920;product=sulfurtransferase TusA family protein;protein_id=WP_005600938.1;transl_table=11 NZ_CP031858.1 RefSeq gene 214987 215502 . - . ID=gene-D1109_RS00925;Name=D1109_RS00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00925;old_locus_tag=D1109_00925 NZ_CP031858.1 Protein Homology CDS 214987 215502 . - 0 ID=cds-WP_005620831.1;Parent=gene-D1109_RS00925;Dbxref=Genbank:WP_005620831.1;Name=WP_005620831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017357669.1;locus_tag=D1109_RS00925;product=hemerythrin domain-containing protein;protein_id=WP_005620831.1;transl_table=11 NZ_CP031858.1 RefSeq pseudogene 215706 216550 . - . ID=gene-D1109_RS00930;Name=D1109_RS00930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D1109_RS00930;old_locus_tag=D1109_00930;pseudo=true NZ_CP031858.1 Protein Homology CDS 215706 216550 . - 0 ID=cds-D1109_RS00930;Parent=gene-D1109_RS00930;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005640692.1;locus_tag=D1109_RS00930;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP031858.1 RefSeq gene 216602 216724 . - . ID=gene-D1109_RS00935;Name=D1109_RS00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00935;old_locus_tag=D1109_00935 NZ_CP031858.1 Protein Homology CDS 216602 216724 . - 0 ID=cds-WP_237611171.1-2;Parent=gene-D1109_RS00935;Dbxref=Genbank:WP_237611171.1;Name=WP_237611171.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021626.2;locus_tag=D1109_RS00935;product=Com family DNA-binding transcriptional regulator;protein_id=WP_237611171.1;transl_table=11 NZ_CP031858.1 RefSeq pseudogene 216913 219238 . - . ID=gene-D1109_RS00940;Name=D1109_RS00940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D1109_RS00940;old_locus_tag=D1109_00940;partial=true;pseudo=true;start_range=.,216913 NZ_CP031858.1 Protein Homology CDS 216913 219238 . - 0 ID=cds-D1109_RS00940;Parent=gene-D1109_RS00940;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597548.1;locus_tag=D1109_RS00940;partial=true;product=phage tail protein;pseudo=true;start_range=.,216913;transl_table=11 NZ_CP031858.1 RefSeq gene 219238 219441 . - . ID=gene-D1109_RS00945;Name=D1109_RS00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00945;old_locus_tag=D1109_00945 NZ_CP031858.1 Protein Homology CDS 219238 219441 . - 0 ID=cds-WP_237611170.1-2;Parent=gene-D1109_RS00945;Dbxref=Genbank:WP_237611170.1;Name=WP_237611170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597546.1;locus_tag=D1109_RS00945;product=hypothetical protein;protein_id=WP_237611170.1;transl_table=11 NZ_CP031858.1 RefSeq gene 219446 219697 . - . ID=gene-D1109_RS00950;Name=D1109_RS00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00950;old_locus_tag=D1109_00950 NZ_CP031858.1 Protein Homology CDS 219446 219697 . - 0 ID=cds-WP_005597545.1-2;Parent=gene-D1109_RS00950;Dbxref=Genbank:WP_005597545.1;Name=WP_005597545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597545.1;locus_tag=D1109_RS00950;product=hypothetical protein;protein_id=WP_005597545.1;transl_table=11 NZ_CP031858.1 RefSeq pseudogene 219715 220522 . - . ID=gene-D1109_RS00955;Name=D1109_RS00955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D1109_RS00955;old_locus_tag=D1109_00955;pseudo=true NZ_CP031858.1 Protein Homology CDS 219715 220522 . - 0 ID=cds-D1109_RS00955;Parent=gene-D1109_RS00955;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005610206.1;locus_tag=D1109_RS00955;product=phage BR0599 family protein;pseudo=true;transl_table=11 NZ_CP031858.1 RefSeq gene 220556 221746 . - . ID=gene-D1109_RS00960;Name=D1109_RS00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00960;old_locus_tag=D1109_00960 NZ_CP031858.1 Protein Homology CDS 220556 221746 . - 0 ID=cds-WP_237611210.1;Parent=gene-D1109_RS00960;Dbxref=Genbank:WP_237611210.1;Name=WP_237611210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010944527.1;locus_tag=D1109_RS00960;product=phage tail protein;protein_id=WP_237611210.1;transl_table=11 NZ_CP031858.1 RefSeq gene 221718 222236 . - . ID=gene-D1109_RS00965;Name=D1109_RS00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00965 NZ_CP031858.1 GeneMarkS-2+ CDS 221718 222236 . - 0 ID=cds-WP_237611211.1;Parent=gene-D1109_RS00965;Dbxref=Genbank:WP_237611211.1;Name=WP_237611211.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=D1109_RS00965;product=hypothetical protein;protein_id=WP_237611211.1;transl_table=11 NZ_CP031858.1 RefSeq gene 222239 223204 . - . ID=gene-D1109_RS00970;Name=D1109_RS00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00970;old_locus_tag=D1109_00965 NZ_CP031858.1 Protein Homology CDS 222239 223204 . - 0 ID=cds-WP_237611167.1-2;Parent=gene-D1109_RS00970;Dbxref=Genbank:WP_237611167.1;Name=WP_237611167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005601445.1;locus_tag=D1109_RS00970;product=hypothetical protein;protein_id=WP_237611167.1;transl_table=11 NZ_CP031858.1 RefSeq gene 223207 224205 . - . ID=gene-D1109_RS00975;Name=D1109_RS00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00975;old_locus_tag=D1109_00970 NZ_CP031858.1 Protein Homology CDS 223207 224205 . - 0 ID=cds-WP_237611166.1-2;Parent=gene-D1109_RS00975;Dbxref=Genbank:WP_237611166.1;Name=WP_237611166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597537.1;locus_tag=D1109_RS00975;product=hypothetical protein;protein_id=WP_237611166.1;transl_table=11 NZ_CP031858.1 RefSeq gene 224205 227564 . - . ID=gene-D1109_RS00980;Name=D1109_RS00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00980;old_locus_tag=D1109_00975 NZ_CP031858.1 Protein Homology CDS 224205 227564 . - 0 ID=cds-WP_237611212.1;Parent=gene-D1109_RS00980;Dbxref=Genbank:WP_237611212.1;Name=WP_237611212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597535.1;locus_tag=D1109_RS00980;product=tape measure protein;protein_id=WP_237611212.1;transl_table=11 NZ_CP031858.1 RefSeq gene 227579 227833 . + . ID=gene-D1109_RS00985;Name=D1109_RS00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00985;old_locus_tag=D1109_00980 NZ_CP031858.1 Protein Homology CDS 227579 227833 . + 0 ID=cds-WP_237611160.1-2;Parent=gene-D1109_RS00985;Dbxref=Genbank:WP_237611160.1;Name=WP_237611160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010944522.1;locus_tag=D1109_RS00985;product=hypothetical protein;protein_id=WP_237611160.1;transl_table=11 NZ_CP031858.1 RefSeq gene 228010 228420 . - . ID=gene-D1109_RS00990;Name=D1109_RS00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00990;old_locus_tag=D1109_00990 NZ_CP031858.1 Protein Homology CDS 228010 228420 . - 0 ID=cds-WP_237611159.1-2;Parent=gene-D1109_RS00990;Dbxref=Genbank:WP_237611159.1;Name=WP_237611159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010944521.1;locus_tag=D1109_RS00990;product=hypothetical protein;protein_id=WP_237611159.1;transl_table=11 NZ_CP031858.1 RefSeq gene 228475 229218 . - . ID=gene-D1109_RS00995;Name=D1109_RS00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS00995;old_locus_tag=D1109_00995 NZ_CP031858.1 Protein Homology CDS 228475 229218 . - 0 ID=cds-WP_237611158.1-2;Parent=gene-D1109_RS00995;Dbxref=Genbank:WP_237611158.1;Name=WP_237611158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010944520.1;locus_tag=D1109_RS00995;product=hypothetical protein;protein_id=WP_237611158.1;transl_table=11 NZ_CP031858.1 RefSeq gene 229211 229378 . - . ID=gene-D1109_RS01000;Name=D1109_RS01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01000 NZ_CP031858.1 Protein Homology CDS 229211 229378 . - 0 ID=cds-WP_237611213.1;Parent=gene-D1109_RS01000;Dbxref=Genbank:WP_237611213.1;Name=WP_237611213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652020.1;locus_tag=D1109_RS01000;product=hypothetical protein;protein_id=WP_237611213.1;transl_table=11 NZ_CP031858.1 RefSeq gene 229375 229821 . - . ID=gene-D1109_RS01005;Name=D1109_RS01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01005;old_locus_tag=D1109_01000 NZ_CP031858.1 Protein Homology CDS 229375 229821 . - 0 ID=cds-WP_237611214.1;Parent=gene-D1109_RS01005;Dbxref=Genbank:WP_237611214.1;Name=WP_237611214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652762.1;locus_tag=D1109_RS01005;product=hypothetical protein;protein_id=WP_237611214.1;transl_table=11 NZ_CP031858.1 RefSeq gene 229818 230213 . - . ID=gene-D1109_RS01010;Name=D1109_RS01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01010;old_locus_tag=D1109_01005 NZ_CP031858.1 Protein Homology CDS 229818 230213 . - 0 ID=cds-WP_237611215.1;Parent=gene-D1109_RS01010;Dbxref=Genbank:WP_237611215.1;Name=WP_237611215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652761.1;locus_tag=D1109_RS01010;product=DUF1320 domain-containing protein;protein_id=WP_237611215.1;transl_table=11 NZ_CP031858.1 RefSeq gene 230213 230584 . - . ID=gene-D1109_RS01015;Name=D1109_RS01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01015;old_locus_tag=D1109_01010 NZ_CP031858.1 Protein Homology CDS 230213 230584 . - 0 ID=cds-WP_237611216.1;Parent=gene-D1109_RS01015;Dbxref=Genbank:WP_237611216.1;Name=WP_237611216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652760.1;locus_tag=D1109_RS01015;product=transcriptional regulator;protein_id=WP_237611216.1;transl_table=11 NZ_CP031858.1 RefSeq gene 230630 231547 . - . ID=gene-D1109_RS01020;Name=D1109_RS01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01020;old_locus_tag=D1109_01015 NZ_CP031858.1 Protein Homology CDS 230630 231547 . - 0 ID=cds-WP_237611217.1;Parent=gene-D1109_RS01020;Dbxref=Genbank:WP_237611217.1;Name=WP_237611217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652759.1;locus_tag=D1109_RS01020;product=Mu-like prophage major head subunit gpT family protein;protein_id=WP_237611217.1;transl_table=11 NZ_CP031858.1 RefSeq gene 231547 232611 . - . ID=gene-D1109_RS01025;Name=D1109_RS01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01025;old_locus_tag=D1109_01020 NZ_CP031858.1 Protein Homology CDS 231547 232611 . - 0 ID=cds-WP_237611218.1;Parent=gene-D1109_RS01025;Dbxref=Genbank:WP_237611218.1;Name=WP_237611218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005606544.1;locus_tag=D1109_RS01025;product=phage protease;protein_id=WP_237611218.1;transl_table=11 NZ_CP031858.1 RefSeq gene 232880 233296 . - . ID=gene-D1109_RS01030;Name=D1109_RS01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01030;old_locus_tag=D1109_01025 NZ_CP031858.1 Protein Homology CDS 232880 233296 . - 0 ID=cds-WP_237611219.1;Parent=gene-D1109_RS01030;Dbxref=Genbank:WP_237611219.1;Name=WP_237611219.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652757.1;locus_tag=D1109_RS01030;product=phage virion morphogenesis protein;protein_id=WP_237611219.1;transl_table=11 NZ_CP031858.1 RefSeq gene 233444 234733 . - . ID=gene-D1109_RS01035;Name=D1109_RS01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01035;old_locus_tag=D1109_01030 NZ_CP031858.1 Protein Homology CDS 233444 234733 . - 0 ID=cds-WP_237611220.1;Parent=gene-D1109_RS01035;Dbxref=Genbank:WP_237611220.1;Name=WP_237611220.1;Ontology_term=GO:0016032,GO:0019068,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_process=viral process|0016032||IEA,virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005606548.1;locus_tag=D1109_RS01035;product=minor capsid protein;protein_id=WP_237611220.1;transl_table=11 NZ_CP031858.1 RefSeq gene 234720 236360 . - . ID=gene-D1109_RS01040;Name=D1109_RS01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01040;old_locus_tag=D1109_01035 NZ_CP031858.1 Protein Homology CDS 234720 236360 . - 0 ID=cds-WP_237611221.1;Parent=gene-D1109_RS01040;Dbxref=Genbank:WP_237611221.1;Name=WP_237611221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253033.1;locus_tag=D1109_RS01040;product=DUF935 domain-containing protein;protein_id=WP_237611221.1;transl_table=11 NZ_CP031858.1 RefSeq gene 236404 238029 . - . ID=gene-D1109_RS01045;Name=terL;gbkey=Gene;gene=terL;gene_biotype=protein_coding;locus_tag=D1109_RS01045;old_locus_tag=D1109_01040 NZ_CP031858.1 Protein Homology CDS 236404 238029 . - 0 ID=cds-WP_237611222.1;Parent=gene-D1109_RS01045;Dbxref=Genbank:WP_237611222.1;Name=WP_237611222.1;gbkey=CDS;gene=terL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248652.1;locus_tag=D1109_RS01045;product=phage terminase large subunit;protein_id=WP_237611222.1;transl_table=11 NZ_CP031858.1 RefSeq gene 238033 238185 . - . ID=gene-D1109_RS01050;Name=D1109_RS01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01050 NZ_CP031858.1 Protein Homology CDS 238033 238185 . - 0 ID=cds-WP_164997543.1;Parent=gene-D1109_RS01050;Dbxref=Genbank:WP_164997543.1;Name=WP_164997543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248651.1;locus_tag=D1109_RS01050;product=hypothetical protein;protein_id=WP_164997543.1;transl_table=11 NZ_CP031858.1 RefSeq gene 238185 238685 . - . ID=gene-D1109_RS01055;Name=D1109_RS01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01055;old_locus_tag=D1109_01045 NZ_CP031858.1 Protein Homology CDS 238185 238685 . - 0 ID=cds-WP_237611223.1;Parent=gene-D1109_RS01055;Dbxref=Genbank:WP_237611223.1;Name=WP_237611223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652752.1;locus_tag=D1109_RS01055;product=DUF1804 family protein;protein_id=WP_237611223.1;transl_table=11 NZ_CP031858.1 RefSeq gene 238695 238949 . - . ID=gene-D1109_RS01060;Name=D1109_RS01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01060;old_locus_tag=D1109_01050 NZ_CP031858.1 Protein Homology CDS 238695 238949 . - 0 ID=cds-WP_039196635.1;Parent=gene-D1109_RS01060;Dbxref=Genbank:WP_039196635.1;Name=WP_039196635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005606393.1;locus_tag=D1109_RS01060;product=hypothetical protein;protein_id=WP_039196635.1;transl_table=11 NZ_CP031858.1 RefSeq gene 238949 239206 . - . ID=gene-D1109_RS01065;Name=D1109_RS01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01065;old_locus_tag=D1109_01055 NZ_CP031858.1 Protein Homology CDS 238949 239206 . - 0 ID=cds-WP_237611152.1;Parent=gene-D1109_RS01065;Dbxref=Genbank:WP_237611152.1;Name=WP_237611152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005822915.1;locus_tag=D1109_RS01065;product=hypothetical protein;protein_id=WP_237611152.1;transl_table=11 NZ_CP031858.1 RefSeq gene 239199 239354 . - . ID=gene-D1109_RS01070;Name=D1109_RS01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01070 NZ_CP031858.1 Protein Homology CDS 239199 239354 . - 0 ID=cds-WP_237611151.1;Parent=gene-D1109_RS01070;Dbxref=Genbank:WP_237611151.1;Name=WP_237611151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652749.1;locus_tag=D1109_RS01070;product=hypothetical protein;protein_id=WP_237611151.1;transl_table=11 NZ_CP031858.1 RefSeq gene 239366 239755 . - . ID=gene-D1109_RS01075;Name=D1109_RS01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01075;old_locus_tag=D1109_01060 NZ_CP031858.1 Protein Homology CDS 239366 239755 . - 0 ID=cds-WP_237611150.1;Parent=gene-D1109_RS01075;Dbxref=Genbank:WP_237611150.1;Name=WP_237611150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652748.1;locus_tag=D1109_RS01075;product=DUF2681 domain-containing protein;protein_id=WP_237611150.1;transl_table=11 NZ_CP031858.1 RefSeq gene 239755 239976 . - . ID=gene-D1109_RS01080;Name=D1109_RS01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01080;old_locus_tag=D1109_01065 NZ_CP031858.1 Protein Homology CDS 239755 239976 . - 0 ID=cds-WP_237611149.1;Parent=gene-D1109_RS01080;Dbxref=Genbank:WP_237611149.1;Name=WP_237611149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652747.1;locus_tag=D1109_RS01080;product=DUF2644 domain-containing protein;protein_id=WP_237611149.1;transl_table=11 NZ_CP031858.1 RefSeq gene 239979 240524 . - . ID=gene-D1109_RS01085;Name=D1109_RS01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01085;old_locus_tag=D1109_01070 NZ_CP031858.1 Protein Homology CDS 239979 240524 . - 0 ID=cds-WP_237611148.1;Parent=gene-D1109_RS01085;Dbxref=Genbank:WP_237611148.1;Name=WP_237611148.1;Ontology_term=GO:0009253;gbkey=CDS;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018346172.1;locus_tag=D1109_RS01085;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_237611148.1;transl_table=11 NZ_CP031858.1 RefSeq gene 240611 241036 . - . ID=gene-D1109_RS01090;Name=D1109_RS01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01090;old_locus_tag=D1109_01075 NZ_CP031858.1 Protein Homology CDS 240611 241036 . - 0 ID=cds-WP_126374502.1;Parent=gene-D1109_RS01090;Dbxref=Genbank:WP_126374502.1;Name=WP_126374502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652745.1;locus_tag=D1109_RS01090;product=mor transcription activator family protein;protein_id=WP_126374502.1;transl_table=11 NZ_CP031858.1 RefSeq gene 241155 241298 . - . ID=gene-D1109_RS01095;Name=D1109_RS01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01095 NZ_CP031858.1 GeneMarkS-2+ CDS 241155 241298 . - 0 ID=cds-WP_237611147.1;Parent=gene-D1109_RS01095;Dbxref=Genbank:WP_237611147.1;Name=WP_237611147.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=D1109_RS01095;product=hypothetical protein;protein_id=WP_237611147.1;transl_table=11 NZ_CP031858.1 RefSeq gene 241794 242000 . - . ID=gene-D1109_RS01100;Name=D1109_RS01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01100;old_locus_tag=D1109_01085 NZ_CP031858.1 Protein Homology CDS 241794 242000 . - 0 ID=cds-WP_237611224.1;Parent=gene-D1109_RS01100;Dbxref=Genbank:WP_237611224.1;Name=WP_237611224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652744.1;locus_tag=D1109_RS01100;product=hypothetical protein;protein_id=WP_237611224.1;transl_table=11 NZ_CP031858.1 RefSeq gene 242013 242606 . - . ID=gene-D1109_RS01105;Name=D1109_RS01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01105;old_locus_tag=D1109_01090 NZ_CP031858.1 Protein Homology CDS 242013 242606 . - 0 ID=cds-WP_237611225.1;Parent=gene-D1109_RS01105;Dbxref=Genbank:WP_237611225.1;Name=WP_237611225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010944501.1;locus_tag=D1109_RS01105;product=antA/AntB antirepressor family protein;protein_id=WP_237611225.1;transl_table=11 NZ_CP031858.1 RefSeq gene 242922 243350 . - . ID=gene-D1109_RS01110;Name=D1109_RS01110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01110;old_locus_tag=D1109_01095 NZ_CP031858.1 Protein Homology CDS 242922 243350 . - 0 ID=cds-WP_237611226.1;Parent=gene-D1109_RS01110;Dbxref=Genbank:WP_237611226.1;Name=WP_237611226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652740.1;locus_tag=D1109_RS01110;product=regulatory protein GemA;protein_id=WP_237611226.1;transl_table=11 NZ_CP031858.1 RefSeq gene 243334 243900 . - . ID=gene-D1109_RS01115;Name=D1109_RS01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01115;old_locus_tag=D1109_01100 NZ_CP031858.1 Protein Homology CDS 243334 243900 . - 0 ID=cds-WP_237611483.1;Parent=gene-D1109_RS01115;Dbxref=Genbank:WP_237611483.1;Name=WP_237611483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251272.1;locus_tag=D1109_RS01115;product=hypothetical protein;protein_id=WP_237611483.1;transl_table=11 NZ_CP031858.1 RefSeq gene 243887 244213 . - . ID=gene-D1109_RS01120;Name=D1109_RS01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01120;old_locus_tag=D1109_01105 NZ_CP031858.1 GeneMarkS-2+ CDS 243887 244213 . - 0 ID=cds-WP_237611227.1;Parent=gene-D1109_RS01120;Dbxref=Genbank:WP_237611227.1;Name=WP_237611227.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=D1109_RS01120;product=hypothetical protein;protein_id=WP_237611227.1;transl_table=11 NZ_CP031858.1 RefSeq gene 244242 244631 . - . ID=gene-D1109_RS01125;Name=D1109_RS01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01125;old_locus_tag=D1109_01110 NZ_CP031858.1 Protein Homology CDS 244242 244631 . - 0 ID=cds-WP_237611144.1;Parent=gene-D1109_RS01125;Dbxref=Genbank:WP_237611144.1;Name=WP_237611144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249673.1;locus_tag=D1109_RS01125;product=hypothetical protein;protein_id=WP_237611144.1;transl_table=11 NZ_CP031858.1 RefSeq gene 244642 244854 . - . ID=gene-D1109_RS01130;Name=D1109_RS01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01130;old_locus_tag=D1109_01115 NZ_CP031858.1 Protein Homology CDS 244642 244854 . - 0 ID=cds-WP_237611143.1;Parent=gene-D1109_RS01130;Dbxref=Genbank:WP_237611143.1;Name=WP_237611143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651997.1;locus_tag=D1109_RS01130;product=hypothetical protein;protein_id=WP_237611143.1;transl_table=11 NZ_CP031858.1 RefSeq gene 244925 245542 . - . ID=gene-D1109_RS01135;Name=D1109_RS01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01135;old_locus_tag=D1109_01120 NZ_CP031858.1 Protein Homology CDS 244925 245542 . - 0 ID=cds-WP_237611142.1;Parent=gene-D1109_RS01135;Dbxref=Genbank:WP_237611142.1;Name=WP_237611142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651996.1;locus_tag=D1109_RS01135;product=DUF3164 family protein;protein_id=WP_237611142.1;transl_table=11 NZ_CP031858.1 RefSeq gene 245545 245769 . - . ID=gene-D1109_RS01140;Name=D1109_RS01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01140;old_locus_tag=D1109_01125 NZ_CP031858.1 Protein Homology CDS 245545 245769 . - 0 ID=cds-WP_237611141.1;Parent=gene-D1109_RS01140;Dbxref=Genbank:WP_237611141.1;Name=WP_237611141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005640647.1;locus_tag=D1109_RS01140;product=hypothetical protein;protein_id=WP_237611141.1;transl_table=11 NZ_CP031858.1 RefSeq gene 245741 246028 . - . ID=gene-D1109_RS01145;Name=D1109_RS01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01145;old_locus_tag=D1109_01130 NZ_CP031858.1 Protein Homology CDS 245741 246028 . - 0 ID=cds-WP_237611140.1;Parent=gene-D1109_RS01145;Dbxref=Genbank:WP_237611140.1;Name=WP_237611140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652735.1;locus_tag=D1109_RS01145;product=hypothetical protein;protein_id=WP_237611140.1;transl_table=11 NZ_CP031858.1 RefSeq gene 246100 246381 . - . ID=gene-D1109_RS01150;Name=D1109_RS01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01150;old_locus_tag=D1109_01135 NZ_CP031858.1 GeneMarkS-2+ CDS 246100 246381 . - 0 ID=cds-WP_237611228.1;Parent=gene-D1109_RS01150;Dbxref=Genbank:WP_237611228.1;Name=WP_237611228.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=D1109_RS01150;product=hypothetical protein;protein_id=WP_237611228.1;transl_table=11 NZ_CP031858.1 RefSeq gene 246378 246575 . - . ID=gene-D1109_RS01155;Name=D1109_RS01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01155;old_locus_tag=D1109_01140 NZ_CP031858.1 Protein Homology CDS 246378 246575 . - 0 ID=cds-WP_237611138.1;Parent=gene-D1109_RS01155;Dbxref=Genbank:WP_237611138.1;Name=WP_237611138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652733.1;locus_tag=D1109_RS01155;product=hypothetical protein;protein_id=WP_237611138.1;transl_table=11 NZ_CP031858.1 RefSeq gene 246586 246831 . - . ID=gene-D1109_RS01160;Name=D1109_RS01160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01160;old_locus_tag=D1109_01145 NZ_CP031858.1 GeneMarkS-2+ CDS 246586 246831 . - 0 ID=cds-WP_111750133.1;Parent=gene-D1109_RS01160;Dbxref=Genbank:WP_111750133.1;Name=WP_111750133.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=D1109_RS01160;product=hypothetical protein;protein_id=WP_111750133.1;transl_table=11 NZ_CP031858.1 RefSeq gene 246847 247728 . - . ID=gene-D1109_RS01165;Name=D1109_RS01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01165;old_locus_tag=D1109_01150 NZ_CP031858.1 Protein Homology CDS 246847 247728 . - 0 ID=cds-WP_237611229.1;Parent=gene-D1109_RS01165;Dbxref=Genbank:WP_237611229.1;Name=WP_237611229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005659430.1;locus_tag=D1109_RS01165;product=AAA family ATPase;protein_id=WP_237611229.1;transl_table=11 NZ_CP031858.1 RefSeq gene 247738 249708 . - . ID=gene-D1109_RS01170;Name=D1109_RS01170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01170;old_locus_tag=D1109_01155 NZ_CP031858.1 Protein Homology CDS 247738 249708 . - 0 ID=cds-WP_237611230.1;Parent=gene-D1109_RS01170;Dbxref=Genbank:WP_237611230.1;Name=WP_237611230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005606443.1;locus_tag=D1109_RS01170;product=Mu transposase C-terminal domain-containing protein;protein_id=WP_237611230.1;transl_table=11 NZ_CP031858.1 RefSeq gene 249718 249987 . - . ID=gene-D1109_RS01175;Name=D1109_RS01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01175;old_locus_tag=D1109_01160 NZ_CP031858.1 Protein Homology CDS 249718 249987 . - 0 ID=cds-WP_237611137.1;Parent=gene-D1109_RS01175;Dbxref=Genbank:WP_237611137.1;Name=WP_237611137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005822937.1;locus_tag=D1109_RS01175;product=transcriptional regulator;protein_id=WP_237611137.1;transl_table=11 NZ_CP031858.1 RefSeq gene 250182 250901 . + . ID=gene-D1109_RS01180;Name=D1109_RS01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01180;old_locus_tag=D1109_01165 NZ_CP031858.1 Protein Homology CDS 250182 250901 . + 0 ID=cds-WP_237611136.1;Parent=gene-D1109_RS01180;Dbxref=Genbank:WP_237611136.1;Name=WP_237611136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005822938.1;locus_tag=D1109_RS01180;product=helix-turn-helix domain-containing protein;protein_id=WP_237611136.1;transl_table=11 NZ_CP031858.1 RefSeq gene 251178 251408 . + . ID=gene-D1109_RS01185;Name=D1109_RS01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01185;old_locus_tag=D1109_01170 NZ_CP031858.1 Protein Homology CDS 251178 251408 . + 0 ID=cds-WP_011848428.1;Parent=gene-D1109_RS01185;Dbxref=Genbank:WP_011848428.1;Name=WP_011848428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005762573.1;locus_tag=D1109_RS01185;product=Flp family type IVb pilin;protein_id=WP_011848428.1;transl_table=11 NZ_CP031858.1 RefSeq gene 251468 251659 . + . ID=gene-D1109_RS01190;Name=D1109_RS01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01190;old_locus_tag=D1109_01175 NZ_CP031858.1 Protein Homology CDS 251468 251659 . + 0 ID=cds-WP_005611759.1;Parent=gene-D1109_RS01190;Dbxref=Genbank:WP_005611759.1;Name=WP_005611759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005611759.1;locus_tag=D1109_RS01190;product=Flp family type IVb pilin;protein_id=WP_005611759.1;transl_table=11 NZ_CP031858.1 RefSeq gene 251704 252132 . + . ID=gene-D1109_RS01195;Name=D1109_RS01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01195;old_locus_tag=D1109_01180 NZ_CP031858.1 Protein Homology CDS 251704 252132 . + 0 ID=cds-WP_237601165.1;Parent=gene-D1109_RS01195;Dbxref=Genbank:WP_237601165.1;Name=WP_237601165.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596754.1;locus_tag=D1109_RS01195;product=prepilin peptidase;protein_id=WP_237601165.1;transl_table=11 NZ_CP031858.1 RefSeq gene 252159 252977 . + . ID=gene-D1109_RS01200;Name=D1109_RS01200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01200;old_locus_tag=D1109_01185 NZ_CP031858.1 Protein Homology CDS 252159 252977 . + 0 ID=cds-WP_043990887.1;Parent=gene-D1109_RS01200;Dbxref=Genbank:WP_043990887.1;Name=WP_043990887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875478.1;locus_tag=D1109_RS01200;product=SAF domain-containing protein;protein_id=WP_043990887.1;transl_table=11 NZ_CP031858.1 RefSeq gene 252967 254355 . + . ID=gene-D1109_RS01205;Name=D1109_RS01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01205;old_locus_tag=D1109_01190 NZ_CP031858.1 Protein Homology CDS 252967 254355 . + 0 ID=cds-WP_005603912.1;Parent=gene-D1109_RS01205;Dbxref=Genbank:WP_005603912.1;Name=WP_005603912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596750.1;locus_tag=D1109_RS01205;product=type II and III secretion system protein family protein;protein_id=WP_005603912.1;transl_table=11 NZ_CP031858.1 RefSeq gene 254352 254855 . + . ID=gene-D1109_RS01210;Name=D1109_RS01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01210;old_locus_tag=D1109_01195 NZ_CP031858.1 Protein Homology CDS 254352 254855 . + 0 ID=cds-WP_005600648.1;Parent=gene-D1109_RS01210;Dbxref=Genbank:WP_005600648.1;Name=WP_005600648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005614774.1;locus_tag=D1109_RS01210;product=Rough colony protein B;protein_id=WP_005600648.1;transl_table=11 NZ_CP031858.1 RefSeq gene 255018 256145 . + . ID=gene-D1109_RS01215;Name=D1109_RS01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01215;old_locus_tag=D1109_01200 NZ_CP031858.1 Protein Homology CDS 255018 256145 . + 0 ID=cds-WP_005596747.1;Parent=gene-D1109_RS01215;Dbxref=Genbank:WP_005596747.1;Name=WP_005596747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005611756.1;locus_tag=D1109_RS01215;product=Flp operon protein D;protein_id=WP_005596747.1;transl_table=11 NZ_CP031858.1 RefSeq gene 256154 257431 . + . ID=gene-D1109_RS01220;Name=D1109_RS01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01220;old_locus_tag=D1109_01205 NZ_CP031858.1 Protein Homology CDS 256154 257431 . + 0 ID=cds-WP_005596745.1;Parent=gene-D1109_RS01220;Dbxref=Genbank:WP_005596745.1;Name=WP_005596745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651042.1;locus_tag=D1109_RS01220;product=CpaF family protein;protein_id=WP_005596745.1;transl_table=11 NZ_CP031858.1 RefSeq gene 257431 258318 . + . ID=gene-D1109_RS01225;Name=D1109_RS01225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01225;old_locus_tag=D1109_01210 NZ_CP031858.1 Protein Homology CDS 257431 258318 . + 0 ID=cds-WP_237611231.1;Parent=gene-D1109_RS01225;Dbxref=Genbank:WP_237611231.1;Name=WP_237611231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600642.1;locus_tag=D1109_RS01225;product=type II secretion system F family protein;protein_id=WP_237611231.1;transl_table=11 NZ_CP031858.1 RefSeq gene 258318 259163 . + . ID=gene-D1109_RS01230;Name=D1109_RS01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01230;old_locus_tag=D1109_01215 NZ_CP031858.1 Protein Homology CDS 258318 259163 . + 0 ID=cds-WP_237611232.1;Parent=gene-D1109_RS01230;Dbxref=Genbank:WP_237611232.1;Name=WP_237611232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596741.1;locus_tag=D1109_RS01230;product=type II secretion system F family protein;protein_id=WP_237611232.1;transl_table=11 NZ_CP031858.1 RefSeq gene 259153 259905 . + . ID=gene-D1109_RS01235;Name=D1109_RS01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01235;old_locus_tag=D1109_01220 NZ_CP031858.1 Protein Homology CDS 259153 259905 . + 0 ID=cds-WP_115590301.1;Parent=gene-D1109_RS01235;Dbxref=Genbank:WP_115590301.1;Name=WP_115590301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596739.1;locus_tag=D1109_RS01235;product=tetratricopeptide repeat protein;protein_id=WP_115590301.1;transl_table=11 NZ_CP031858.1 RefSeq gene 259908 260393 . + . ID=gene-D1109_RS01240;Name=D1109_RS01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01240;old_locus_tag=D1109_01225 NZ_CP031858.1 Protein Homology CDS 259908 260393 . + 0 ID=cds-WP_005607379.1;Parent=gene-D1109_RS01240;Dbxref=Genbank:WP_005607379.1;Name=WP_005607379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596736.1;locus_tag=D1109_RS01240;product=pilus assembly protein;protein_id=WP_005607379.1;transl_table=11 NZ_CP031858.1 RefSeq gene 260365 260961 . + . ID=gene-D1109_RS01245;Name=D1109_RS01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01245;old_locus_tag=D1109_01230 NZ_CP031858.1 Protein Homology CDS 260365 260961 . + 0 ID=cds-WP_005614764.1;Parent=gene-D1109_RS01245;Dbxref=Genbank:WP_005614764.1;Name=WP_005614764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600638.1;locus_tag=D1109_RS01245;product=Tight adherence protein F;protein_id=WP_005614764.1;transl_table=11 NZ_CP031858.1 RefSeq gene 260985 262565 . + . ID=gene-D1109_RS01250;Name=D1109_RS01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01250;old_locus_tag=D1109_01235 NZ_CP031858.1 Protein Homology CDS 260985 262565 . + 0 ID=cds-WP_237611233.1;Parent=gene-D1109_RS01250;Dbxref=Genbank:WP_237611233.1;Name=WP_237611233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005617028.1;locus_tag=D1109_RS01250;product=pilus assembly protein;protein_id=WP_237611233.1;transl_table=11 NZ_CP031858.1 RefSeq gene 262652 263374 . - . ID=gene-D1109_RS01255;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=D1109_RS01255;old_locus_tag=D1109_01240 NZ_CP031858.1 Protein Homology CDS 262652 263374 . - 0 ID=cds-WP_237611234.1;Parent=gene-D1109_RS01255;Dbxref=Genbank:WP_237611234.1;Name=WP_237611234.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596730.1;locus_tag=D1109_RS01255;product=DNA repair protein RecO;protein_id=WP_237611234.1;transl_table=11 NZ_CP031858.1 RefSeq gene 263384 264298 . - . ID=gene-D1109_RS01260;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=D1109_RS01260;old_locus_tag=D1109_01245 NZ_CP031858.1 Protein Homology CDS 263384 264298 . - 0 ID=cds-WP_005611747.1;Parent=gene-D1109_RS01260;Dbxref=Genbank:WP_005611747.1;Name=WP_005611747.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0019843,GO:0043022;gbkey=CDS;gene=era;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,rRNA binding|0019843||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005603895.1;locus_tag=D1109_RS01260;product=GTPase Era;protein_id=WP_005611747.1;transl_table=11 NZ_CP031858.1 RefSeq gene 264368 265039 . - . ID=gene-D1109_RS01265;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=D1109_RS01265;old_locus_tag=D1109_01250 NZ_CP031858.1 Protein Homology CDS 264368 265039 . - 0 ID=cds-WP_005618856.1;Parent=gene-D1109_RS01265;Dbxref=Genbank:WP_005618856.1;Name=WP_005618856.1;Ontology_term=GO:0006396,GO:0004525;gbkey=CDS;gene=rnc;go_function=ribonuclease III activity|0004525||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011848424.1;locus_tag=D1109_RS01265;product=ribonuclease III;protein_id=WP_005618856.1;transl_table=11 NZ_CP031858.1 RefSeq gene 265136 266095 . - . ID=gene-D1109_RS01270;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=D1109_RS01270;old_locus_tag=D1109_01255 NZ_CP031858.1 Protein Homology CDS 265136 266095 . - 0 ID=cds-WP_237611235.1;Parent=gene-D1109_RS01270;Dbxref=Genbank:WP_237611235.1;Name=WP_237611235.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875129.1;locus_tag=D1109_RS01270;product=signal peptidase I;protein_id=WP_237611235.1;transl_table=11 NZ_CP031858.1 RefSeq gene 266200 267993 . - . ID=gene-D1109_RS01275;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=D1109_RS01275;old_locus_tag=D1109_01260 NZ_CP031858.1 Protein Homology CDS 266200 267993 . - 0 ID=cds-WP_237611484.1;Parent=gene-D1109_RS01275;Dbxref=Genbank:WP_237611484.1;Name=WP_237611484.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991607.1;locus_tag=D1109_RS01275;product=translation elongation factor 4;protein_id=WP_237611484.1;transl_table=11 NZ_CP031858.1 RefSeq pseudogene 268172 268612 . - . ID=gene-D1109_RS01280;Name=thiE;end_range=268612,.;gbkey=Gene;gene=thiE;gene_biotype=pseudogene;locus_tag=D1109_RS01280;old_locus_tag=D1109_01265;partial=true;pseudo=true NZ_CP031858.1 Protein Homology CDS 268172 268612 . - 0 ID=cds-D1109_RS01280;Parent=gene-D1109_RS01280;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009228,GO:0004789;end_range=268612,.;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005617021.1;locus_tag=D1109_RS01280;partial=true;product=thiamine phosphate synthase;pseudo=true;transl_table=11 NZ_CP031858.1 RefSeq pseudogene 268623 269198 . - . ID=gene-D1109_RS01285;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=pseudogene;locus_tag=D1109_RS01285;old_locus_tag=D1109_01270;partial=true;pseudo=true;start_range=.,268623 NZ_CP031858.1 Protein Homology CDS 268623 269198 . - 0 ID=cds-D1109_RS01285;Parent=gene-D1109_RS01285;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005700215.1;locus_tag=D1109_RS01285;partial=true;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;pseudo=true;start_range=.,268623;transl_table=11 NZ_CP031858.1 RefSeq gene 269224 270168 . - . ID=gene-D1109_RS01290;Name=D1109_RS01290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01290;old_locus_tag=D1109_01275 NZ_CP031858.1 Protein Homology CDS 269224 270168 . - 0 ID=cds-WP_237611485.1;Parent=gene-D1109_RS01290;Dbxref=Genbank:WP_237611485.1;Name=WP_237611485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875126.1;locus_tag=D1109_RS01290;product=ABC transporter substrate-binding protein;protein_id=WP_237611485.1;transl_table=11 NZ_CP031858.1 RefSeq gene 270192 270842 . - . ID=gene-D1109_RS01295;Name=tenA;gbkey=Gene;gene=tenA;gene_biotype=protein_coding;locus_tag=D1109_RS01295;old_locus_tag=D1109_01280 NZ_CP031858.1 Protein Homology CDS 270192 270842 . - 0 ID=cds-WP_237611236.1;Parent=gene-D1109_RS01295;Dbxref=Genbank:WP_237611236.1;Name=WP_237611236.1;Ontology_term=GO:0006772,GO:0050334;gbkey=CDS;gene=tenA;go_function=thiaminase activity|0050334||IEA;go_process=thiamine metabolic process|0006772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012262842.1;locus_tag=D1109_RS01295;product=thiaminase II;protein_id=WP_237611236.1;transl_table=11 NZ_CP031858.1 RefSeq gene 270869 272014 . - . ID=gene-D1109_RS01300;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=D1109_RS01300;old_locus_tag=D1109_01285 NZ_CP031858.1 Protein Homology CDS 270869 272014 . - 0 ID=cds-WP_237611237.1;Parent=gene-D1109_RS01300;Dbxref=Genbank:WP_237611237.1;Name=WP_237611237.1;Ontology_term=GO:0009228,GO:0016829,GO:1904047;gbkey=CDS;gene=thiH;go_function=lyase activity|0016829||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600616.1;locus_tag=D1109_RS01300;product=2-iminoacetate synthase ThiH;protein_id=WP_237611237.1;transl_table=11 NZ_CP031858.1 RefSeq gene 272024 272785 . - . ID=gene-D1109_RS01305;Name=D1109_RS01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01305;old_locus_tag=D1109_01290 NZ_CP031858.1 Protein Homology CDS 272024 272785 . - 0 ID=cds-WP_237611486.1;Parent=gene-D1109_RS01305;Dbxref=Genbank:WP_237611486.1;Name=WP_237611486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005614741.1;locus_tag=D1109_RS01305;product=thiazole synthase;protein_id=WP_237611486.1;transl_table=11 NZ_CP031858.1 RefSeq gene 272877 273077 . - . ID=gene-D1109_RS01310;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=D1109_RS01310;old_locus_tag=D1109_01295 NZ_CP031858.1 Protein Homology CDS 272877 273077 . - 0 ID=cds-WP_237611238.1;Parent=gene-D1109_RS01310;Dbxref=Genbank:WP_237611238.1;Name=WP_237611238.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600611.1;locus_tag=D1109_RS01310;product=sulfur carrier protein ThiS;protein_id=WP_237611238.1;transl_table=11 NZ_CP031858.1 RefSeq gene 273105 273854 . - . ID=gene-D1109_RS01315;Name=D1109_RS01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01315;old_locus_tag=D1109_01300 NZ_CP031858.1 Protein Homology CDS 273105 273854 . - 0 ID=cds-WP_237611239.1;Parent=gene-D1109_RS01315;Dbxref=Genbank:WP_237611239.1;Name=WP_237611239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005614740.1;locus_tag=D1109_RS01315;product=HesA/MoeB/ThiF family protein;protein_id=WP_237611239.1;transl_table=11 NZ_CP031858.1 RefSeq gene 273900 274649 . - . ID=gene-D1109_RS01320;Name=D1109_RS01320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01320;old_locus_tag=D1109_01305 NZ_CP031858.1 Protein Homology CDS 273900 274649 . - 0 ID=cds-WP_237611240.1;Parent=gene-D1109_RS01320;Dbxref=Genbank:WP_237611240.1;Name=WP_237611240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875122.1;locus_tag=D1109_RS01320;product=ABC transporter permease;protein_id=WP_237611240.1;transl_table=11 NZ_CP031858.1 RefSeq gene 274642 275115 . - . ID=gene-D1109_RS01325;Name=D1109_RS01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01325;old_locus_tag=D1109_01310 NZ_CP031858.1 Protein Homology CDS 274642 275115 . - 0 ID=cds-WP_237611487.1;Parent=gene-D1109_RS01325;Dbxref=Genbank:WP_237611487.1;Name=WP_237611487.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600604.1;locus_tag=D1109_RS01325;product=ATP-binding cassette domain-containing protein;protein_id=WP_237611487.1;transl_table=11 NZ_CP031858.1 RefSeq gene 275106 275372 . - . ID=gene-D1109_RS01330;Name=D1109_RS01330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01330;old_locus_tag=D1109_01315 NZ_CP031858.1 Protein Homology CDS 275106 275372 . - 0 ID=cds-WP_005596697.1;Parent=gene-D1109_RS01330;Dbxref=Genbank:WP_005596697.1;Name=WP_005596697.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600601.1;locus_tag=D1109_RS01330;product=ATP-binding cassette domain-containing protein;protein_id=WP_005596697.1;transl_table=11 NZ_CP031858.1 cmsearch riboswitch 275476 275568 . - . ID=id-NZ_CP031858.1:275476..275568;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP031858.1 RefSeq gene 275763 277211 . - . ID=gene-D1109_RS01335;Name=D1109_RS01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01335;old_locus_tag=D1109_01320 NZ_CP031858.1 Protein Homology CDS 275763 277211 . - 0 ID=cds-WP_005596696.1;Parent=gene-D1109_RS01335;Dbxref=Genbank:WP_005596696.1;Name=WP_005596696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596696.1;locus_tag=D1109_RS01335;product=alanine:cation symporter family protein;protein_id=WP_005596696.1;transl_table=11 NZ_CP031858.1 RefSeq gene 277311 278306 . - . ID=gene-D1109_RS01340;Name=D1109_RS01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01340;old_locus_tag=D1109_01325 NZ_CP031858.1 Protein Homology CDS 277311 278306 . - 0 ID=cds-WP_005603879.1;Parent=gene-D1109_RS01340;Dbxref=Genbank:WP_005603879.1;Name=WP_005603879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005614739.1;locus_tag=D1109_RS01340;product=nickel/cobalt transporter;protein_id=WP_005603879.1;transl_table=11 NZ_CP031858.1 RefSeq gene 278297 278938 . - . ID=gene-D1109_RS01345;Name=D1109_RS01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01345;old_locus_tag=D1109_01330 NZ_CP031858.1 Protein Homology CDS 278297 278938 . - 0 ID=cds-WP_005618850.1;Parent=gene-D1109_RS01345;Dbxref=Genbank:WP_005618850.1;Name=WP_005618850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012478387.1;locus_tag=D1109_RS01345;product=DUF1007 family protein;protein_id=WP_005618850.1;transl_table=11 NZ_CP031858.1 RefSeq gene 278999 279385 . - . ID=gene-D1109_RS01350;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=D1109_RS01350;old_locus_tag=D1109_01335 NZ_CP031858.1 cmsearch RNase_P_RNA 278999 279385 . - . ID=rna-D1109_RS01350;Parent=gene-D1109_RS01350;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D1109_RS01350;product=RNase P RNA component class A NZ_CP031858.1 cmsearch exon 278999 279385 . - . ID=exon-D1109_RS01350-1;Parent=rna-D1109_RS01350;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D1109_RS01350;product=RNase P RNA component class A NZ_CP031858.1 RefSeq gene 279753 280085 . - . ID=gene-D1109_RS01355;Name=D1109_RS01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01355;old_locus_tag=D1109_01340 NZ_CP031858.1 GeneMarkS-2+ CDS 279753 280085 . - 0 ID=cds-WP_237611241.1;Parent=gene-D1109_RS01355;Dbxref=Genbank:WP_237611241.1;Name=WP_237611241.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=D1109_RS01355;product=hypothetical protein;protein_id=WP_237611241.1;transl_table=11 NZ_CP031858.1 RefSeq gene 280142 280303 . - . ID=gene-D1109_RS01360;Name=D1109_RS01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01360 NZ_CP031858.1 Protein Homology CDS 280142 280303 . - 0 ID=cds-WP_237611242.1;Parent=gene-D1109_RS01360;Dbxref=Genbank:WP_237611242.1;Name=WP_237611242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247809.1;locus_tag=D1109_RS01360;product=hypothetical protein;protein_id=WP_237611242.1;transl_table=11 NZ_CP031858.1 RefSeq gene 280324 285522 . - . ID=gene-D1109_RS01365;Name=D1109_RS01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01365;old_locus_tag=D1109_01345 NZ_CP031858.1 Protein Homology CDS 280324 285522 . - 0 ID=cds-WP_237611243.1;Parent=gene-D1109_RS01365;Dbxref=Genbank:WP_237611243.1;Name=WP_237611243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005616949.1;locus_tag=D1109_RS01365;product=phage tail protein;protein_id=WP_237611243.1;transl_table=11 NZ_CP031858.1 RefSeq gene 285668 285850 . + . ID=gene-D1109_RS01370;Name=D1109_RS01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01370;old_locus_tag=D1109_01350 NZ_CP031858.1 Protein Homology CDS 285668 285850 . + 0 ID=cds-WP_043880771.1;Parent=gene-D1109_RS01370;Dbxref=Genbank:WP_043880771.1;Name=WP_043880771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253371.1;locus_tag=D1109_RS01370;product=hypothetical protein;protein_id=WP_043880771.1;transl_table=11 NZ_CP031858.1 RefSeq gene 285839 286444 . - . ID=gene-D1109_RS01375;Name=D1109_RS01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01375;old_locus_tag=D1109_01355 NZ_CP031858.1 Protein Homology CDS 285839 286444 . - 0 ID=cds-WP_237611244.1;Parent=gene-D1109_RS01375;Dbxref=Genbank:WP_237611244.1;Name=WP_237611244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012478375.1;locus_tag=D1109_RS01375;product=tail assembly protein;protein_id=WP_237611244.1;transl_table=11 NZ_CP031858.1 RefSeq gene 286384 287157 . - . ID=gene-D1109_RS01380;Name=D1109_RS01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01380;old_locus_tag=D1109_01360 NZ_CP031858.1 Protein Homology CDS 286384 287157 . - 0 ID=cds-WP_237611245.1;Parent=gene-D1109_RS01380;Dbxref=Genbank:WP_237611245.1;Name=WP_237611245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484726.1;locus_tag=D1109_RS01380;product=C40 family peptidase;protein_id=WP_237611245.1;transl_table=11 NZ_CP031858.1 RefSeq gene 287159 287896 . - . ID=gene-D1109_RS01385;Name=D1109_RS01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01385;old_locus_tag=D1109_01365 NZ_CP031858.1 Protein Homology CDS 287159 287896 . - 0 ID=cds-WP_237611488.1;Parent=gene-D1109_RS01385;Dbxref=Genbank:WP_237611488.1;Name=WP_237611488.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251685.1;locus_tag=D1109_RS01385;product=phage minor tail protein L;protein_id=WP_237611488.1;transl_table=11 NZ_CP031858.1 RefSeq gene 288015 288878 . - . ID=gene-D1109_RS01390;Name=D1109_RS01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01390;old_locus_tag=D1109_01370 NZ_CP031858.1 Protein Homology CDS 288015 288878 . - 0 ID=cds-WP_237611246.1;Parent=gene-D1109_RS01390;Dbxref=Genbank:WP_237611246.1;Name=WP_237611246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005607324.1;locus_tag=D1109_RS01390;product=phage antirepressor N-terminal domain-containing protein;protein_id=WP_237611246.1;transl_table=11 NZ_CP031858.1 RefSeq gene 289301 289765 . + . ID=gene-D1109_RS01395;Name=D1109_RS01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01395;old_locus_tag=D1109_01375 NZ_CP031858.1 GeneMarkS-2+ CDS 289301 289765 . + 0 ID=cds-WP_237611247.1;Parent=gene-D1109_RS01395;Dbxref=Genbank:WP_237611247.1;Name=WP_237611247.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=D1109_RS01395;product=hypothetical protein;protein_id=WP_237611247.1;transl_table=11 NZ_CP031858.1 RefSeq gene 289772 290290 . - . ID=gene-D1109_RS01400;Name=D1109_RS01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01400;old_locus_tag=D1109_01380 NZ_CP031858.1 Protein Homology CDS 289772 290290 . - 0 ID=cds-WP_237611248.1;Parent=gene-D1109_RS01400;Dbxref=Genbank:WP_237611248.1;Name=WP_237611248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013525918.1;locus_tag=D1109_RS01400;product=phage antirepressor N-terminal domain-containing protein;protein_id=WP_237611248.1;transl_table=11 NZ_CP031858.1 RefSeq gene 290807 291142 . - . ID=gene-D1109_RS01405;Name=D1109_RS01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01405;old_locus_tag=D1109_01390 NZ_CP031858.1 Protein Homology CDS 290807 291142 . - 0 ID=cds-WP_237611249.1;Parent=gene-D1109_RS01405;Dbxref=Genbank:WP_237611249.1;Name=WP_237611249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015701500.1;locus_tag=D1109_RS01405;product=phage tail protein;protein_id=WP_237611249.1;transl_table=11 NZ_CP031858.1 RefSeq gene 291151 294582 . - . ID=gene-D1109_RS01410;Name=D1109_RS01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01410;old_locus_tag=D1109_01395 NZ_CP031858.1 Protein Homology CDS 291151 294582 . - 0 ID=cds-WP_237611250.1;Parent=gene-D1109_RS01410;Dbxref=Genbank:WP_237611250.1;Name=WP_237611250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012621825.1;locus_tag=D1109_RS01410;product=tape measure protein;protein_id=WP_237611250.1;transl_table=11 NZ_CP031858.1 RefSeq gene 294640 294876 . - . ID=gene-D1109_RS01415;Name=D1109_RS01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01415;old_locus_tag=D1109_01400 NZ_CP031858.1 Protein Homology CDS 294640 294876 . - 0 ID=cds-WP_237611251.1;Parent=gene-D1109_RS01415;Dbxref=Genbank:WP_237611251.1;Name=WP_237611251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005661743.1;locus_tag=D1109_RS01415;product=hypothetical protein;protein_id=WP_237611251.1;transl_table=11 NZ_CP031858.1 RefSeq gene 294948 295223 . - . ID=gene-D1109_RS01420;Name=D1109_RS01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01420;old_locus_tag=D1109_01405 NZ_CP031858.1 Protein Homology CDS 294948 295223 . - 0 ID=cds-WP_237611252.1;Parent=gene-D1109_RS01420;Dbxref=Genbank:WP_237611252.1;Name=WP_237611252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011848411.1;locus_tag=D1109_RS01420;product=DUF4035 domain-containing protein;protein_id=WP_237611252.1;transl_table=11 NZ_CP031858.1 RefSeq gene 295223 295639 . - . ID=gene-D1109_RS01425;Name=D1109_RS01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01425;old_locus_tag=D1109_01410 NZ_CP031858.1 Protein Homology CDS 295223 295639 . - 0 ID=cds-WP_237611253.1;Parent=gene-D1109_RS01425;Dbxref=Genbank:WP_237611253.1;Name=WP_237611253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252745.1;locus_tag=D1109_RS01425;product=hypothetical protein;protein_id=WP_237611253.1;transl_table=11 NZ_CP031858.1 RefSeq gene 295699 296355 . - . ID=gene-D1109_RS01430;Name=D1109_RS01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01430;old_locus_tag=D1109_01415 NZ_CP031858.1 Protein Homology CDS 295699 296355 . - 0 ID=cds-WP_237611254.1;Parent=gene-D1109_RS01430;Dbxref=Genbank:WP_237611254.1;Name=WP_237611254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251691.1;locus_tag=D1109_RS01430;product=hypothetical protein;protein_id=WP_237611254.1;transl_table=11 NZ_CP031858.1 RefSeq gene 296360 296704 . - . ID=gene-D1109_RS01435;Name=D1109_RS01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01435;old_locus_tag=D1109_01420 NZ_CP031858.1 Protein Homology CDS 296360 296704 . - 0 ID=cds-WP_237610835.1;Parent=gene-D1109_RS01435;Dbxref=Genbank:WP_237610835.1;Name=WP_237610835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006718612.1;locus_tag=D1109_RS01435;product=DUF3168 domain-containing protein;protein_id=WP_237610835.1;transl_table=11 NZ_CP031858.1 RefSeq gene 296701 297183 . - . ID=gene-D1109_RS01440;Name=D1109_RS01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01440;old_locus_tag=D1109_01425 NZ_CP031858.1 Protein Homology CDS 296701 297183 . - 0 ID=cds-WP_237611255.1;Parent=gene-D1109_RS01440;Dbxref=Genbank:WP_237611255.1;Name=WP_237611255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012771353.1;locus_tag=D1109_RS01440;product=HK97 gp10 family phage protein;protein_id=WP_237611255.1;transl_table=11 NZ_CP031858.1 RefSeq gene 297176 297499 . - . ID=gene-D1109_RS01445;Name=D1109_RS01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01445;old_locus_tag=D1109_01430 NZ_CP031858.1 Protein Homology CDS 297176 297499 . - 0 ID=cds-WP_237611256.1;Parent=gene-D1109_RS01445;Dbxref=Genbank:WP_237611256.1;Name=WP_237611256.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017806173.1;locus_tag=D1109_RS01445;product=phage head closure protein;protein_id=WP_237611256.1;transl_table=11 NZ_CP031858.1 RefSeq gene 297509 297832 . - . ID=gene-D1109_RS01450;Name=D1109_RS01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01450;old_locus_tag=D1109_01435 NZ_CP031858.1 Protein Homology CDS 297509 297832 . - 0 ID=cds-WP_237611257.1;Parent=gene-D1109_RS01450;Dbxref=Genbank:WP_237611257.1;Name=WP_237611257.1;Ontology_term=GO:0016032;gbkey=CDS;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017806174.1;locus_tag=D1109_RS01450;product=head-tail connector protein;protein_id=WP_237611257.1;transl_table=11 NZ_CP031858.1 RefSeq gene 297881 299089 . - . ID=gene-D1109_RS01455;Name=D1109_RS01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01455;old_locus_tag=D1109_01440 NZ_CP031858.1 Protein Homology CDS 297881 299089 . - 0 ID=cds-WP_237611258.1;Parent=gene-D1109_RS01455;Dbxref=Genbank:WP_237611258.1;Name=WP_237611258.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251696.1;locus_tag=D1109_RS01455;product=phage major capsid protein;protein_id=WP_237611258.1;transl_table=11 NZ_CP031858.1 RefSeq gene 299159 299758 . - . ID=gene-D1109_RS01460;Name=D1109_RS01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01460;old_locus_tag=D1109_01445 NZ_CP031858.1 Protein Homology CDS 299159 299758 . - 0 ID=cds-WP_237611259.1;Parent=gene-D1109_RS01460;Dbxref=Genbank:WP_237611259.1;Name=WP_237611259.1;Ontology_term=GO:0019068,GO:0005198,GO:0008233,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA,peptidase activity|0008233||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251697.1;locus_tag=D1109_RS01460;product=HK97 family phage prohead protease;protein_id=WP_237611259.1;transl_table=11 NZ_CP031858.1 RefSeq gene 299751 300968 . - . ID=gene-D1109_RS01465;Name=D1109_RS01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01465;old_locus_tag=D1109_01450 NZ_CP031858.1 Protein Homology CDS 299751 300968 . - 0 ID=cds-WP_237611260.1;Parent=gene-D1109_RS01465;Dbxref=Genbank:WP_237611260.1;Name=WP_237611260.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251698.1;locus_tag=D1109_RS01465;product=phage portal protein;protein_id=WP_237611260.1;transl_table=11 NZ_CP031858.1 RefSeq gene 301114 302817 . - . ID=gene-D1109_RS01470;Name=D1109_RS01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01470;old_locus_tag=D1109_01455 NZ_CP031858.1 Protein Homology CDS 301114 302817 . - 0 ID=cds-WP_237611261.1;Parent=gene-D1109_RS01470;Dbxref=Genbank:WP_237611261.1;Name=WP_237611261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251699.1;locus_tag=D1109_RS01470;product=terminase large subunit;protein_id=WP_237611261.1;transl_table=11 NZ_CP031858.1 RefSeq gene 302814 303299 . - . ID=gene-D1109_RS01475;Name=D1109_RS01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01475;old_locus_tag=D1109_01460 NZ_CP031858.1 Protein Homology CDS 302814 303299 . - 0 ID=cds-WP_237611262.1;Parent=gene-D1109_RS01475;Dbxref=Genbank:WP_237611262.1;Name=WP_237611262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252750.1;locus_tag=D1109_RS01475;product=phage terminase small subunit P27 family;protein_id=WP_237611262.1;transl_table=11 NZ_CP031858.1 RefSeq gene 303410 303760 . - . ID=gene-D1109_RS01480;Name=D1109_RS01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01480;old_locus_tag=D1109_01465 NZ_CP031858.1 Protein Homology CDS 303410 303760 . - 0 ID=cds-WP_237611263.1;Parent=gene-D1109_RS01480;Dbxref=Genbank:WP_237611263.1;Name=WP_237611263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001135225.1;locus_tag=D1109_RS01480;product=HNH endonuclease;protein_id=WP_237611263.1;transl_table=11 NZ_CP031858.1 RefSeq gene 303906 304157 . - . ID=gene-D1109_RS01485;Name=D1109_RS01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01485;old_locus_tag=D1109_01470 NZ_CP031858.1 Protein Homology CDS 303906 304157 . - 0 ID=cds-WP_237611264.1;Parent=gene-D1109_RS01485;Dbxref=Genbank:WP_237611264.1;Name=WP_237611264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017806475.1;locus_tag=D1109_RS01485;product=hypothetical protein;protein_id=WP_237611264.1;transl_table=11 NZ_CP031858.1 RefSeq gene 304375 304746 . - . ID=gene-D1109_RS01490;Name=D1109_RS01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01490;old_locus_tag=D1109_01480 NZ_CP031858.1 Protein Homology CDS 304375 304746 . - 0 ID=cds-WP_237611265.1;Parent=gene-D1109_RS01490;Dbxref=Genbank:WP_237611265.1;Name=WP_237611265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011848402.1;locus_tag=D1109_RS01490;product=DUF2570 domain-containing protein;protein_id=WP_237611265.1;transl_table=11 NZ_CP031858.1 RefSeq gene 304838 305380 . - . ID=gene-D1109_RS01495;Name=D1109_RS01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01495;old_locus_tag=D1109_01485 NZ_CP031858.1 Protein Homology CDS 304838 305380 . - 0 ID=cds-WP_237611266.1;Parent=gene-D1109_RS01495;Dbxref=Genbank:WP_237611266.1;Name=WP_237611266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011848401.1;locus_tag=D1109_RS01495;product=lysozyme;protein_id=WP_237611266.1;transl_table=11 NZ_CP031858.1 RefSeq gene 305373 305612 . - . ID=gene-D1109_RS01500;Name=D1109_RS01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01500;old_locus_tag=D1109_01490 NZ_CP031858.1 Protein Homology CDS 305373 305612 . - 0 ID=cds-WP_043880766.1;Parent=gene-D1109_RS01500;Dbxref=Genbank:WP_043880766.1;Name=WP_043880766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005826393.1;locus_tag=D1109_RS01500;product=hypothetical protein;protein_id=WP_043880766.1;transl_table=11 NZ_CP031858.1 RefSeq gene 305752 306261 . - . ID=gene-D1109_RS01505;Name=D1109_RS01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01505;old_locus_tag=D1109_01495 NZ_CP031858.1 Protein Homology CDS 305752 306261 . - 0 ID=cds-WP_237611489.1;Parent=gene-D1109_RS01505;Dbxref=Genbank:WP_237611489.1;Name=WP_237611489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011848400.1;locus_tag=D1109_RS01505;product=antitermination protein;protein_id=WP_237611489.1;transl_table=11 NZ_CP031858.1 RefSeq gene 306254 306622 . - . ID=gene-D1109_RS01510;Name=D1109_RS01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01510;old_locus_tag=D1109_01500 NZ_CP031858.1 Protein Homology CDS 306254 306622 . - 0 ID=cds-WP_011848399.1;Parent=gene-D1109_RS01510;Dbxref=Genbank:WP_011848399.1;Name=WP_011848399.1;Ontology_term=GO:0006310;gbkey=CDS;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012072962.1;locus_tag=D1109_RS01510;product=RusA family crossover junction endodeoxyribonuclease;protein_id=WP_011848399.1;transl_table=11 NZ_CP031858.1 RefSeq gene 306694 307716 . - . ID=gene-D1109_RS01515;Name=D1109_RS01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01515;old_locus_tag=D1109_01505 NZ_CP031858.1 Protein Homology CDS 306694 307716 . - 0 ID=cds-WP_237611267.1;Parent=gene-D1109_RS01515;Dbxref=Genbank:WP_237611267.1;Name=WP_237611267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011848398.1;locus_tag=D1109_RS01515;product=DUF968 domain-containing protein;protein_id=WP_237611267.1;transl_table=11 NZ_CP031858.1 RefSeq gene 307735 308262 . - . ID=gene-D1109_RS01520;Name=D1109_RS01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01520;old_locus_tag=D1109_01510 NZ_CP031858.1 Protein Homology CDS 307735 308262 . - 0 ID=cds-WP_237611268.1;Parent=gene-D1109_RS01520;Dbxref=Genbank:WP_237611268.1;Name=WP_237611268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005613575.1;locus_tag=D1109_RS01520;product=phage N-6-adenine-methyltransferase;protein_id=WP_237611268.1;transl_table=11 NZ_CP031858.1 RefSeq gene 308265 309329 . - . ID=gene-D1109_RS01525;Name=D1109_RS01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01525 NZ_CP031858.1 Protein Homology CDS 308265 309329 . - 0 ID=cds-WP_237611269.1;Parent=gene-D1109_RS01525;Dbxref=Genbank:WP_237611269.1;Name=WP_237611269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991296.1;locus_tag=D1109_RS01525;product=conserved phage C-terminal domain-containing protein;protein_id=WP_237611269.1;transl_table=11 NZ_CP031858.1 RefSeq gene 309326 310021 . - . ID=gene-D1109_RS01530;Name=D1109_RS01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01530;old_locus_tag=D1109_01525 NZ_CP031858.1 Protein Homology CDS 309326 310021 . - 0 ID=cds-WP_237610819.1;Parent=gene-D1109_RS01530;Dbxref=Genbank:WP_237610819.1;Name=WP_237610819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011848395.1;locus_tag=D1109_RS01530;product=phage regulatory protein/antirepressor Ant;protein_id=WP_237610819.1;transl_table=11 NZ_CP031858.1 RefSeq gene 310080 310268 . - . ID=gene-D1109_RS01535;Name=D1109_RS01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01535;old_locus_tag=D1109_01530 NZ_CP031858.1 Protein Homology CDS 310080 310268 . - 0 ID=cds-WP_011848394.1;Parent=gene-D1109_RS01535;Dbxref=Genbank:WP_011848394.1;Name=WP_011848394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247792.1;locus_tag=D1109_RS01535;product=Cro/CI family transcriptional regulator;protein_id=WP_011848394.1;transl_table=11 NZ_CP031858.1 RefSeq gene 310394 311050 . + . ID=gene-D1109_RS01540;Name=D1109_RS01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01540;old_locus_tag=D1109_01535 NZ_CP031858.1 Protein Homology CDS 310394 311050 . + 0 ID=cds-WP_237611270.1;Parent=gene-D1109_RS01540;Dbxref=Genbank:WP_237611270.1;Name=WP_237611270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247791.1;locus_tag=D1109_RS01540;product=helix-turn-helix domain-containing protein;protein_id=WP_237611270.1;transl_table=11 NZ_CP031858.1 RefSeq gene 311236 312132 . + . ID=gene-D1109_RS01545;Name=D1109_RS01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01545;old_locus_tag=D1109_01540 NZ_CP031858.1 GeneMarkS-2+ CDS 311236 312132 . + 0 ID=cds-WP_237611271.1;Parent=gene-D1109_RS01545;Dbxref=Genbank:WP_237611271.1;Name=WP_237611271.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=D1109_RS01545;product=hypothetical protein;protein_id=WP_237611271.1;transl_table=11 NZ_CP031858.1 RefSeq gene 312337 312972 . - . ID=gene-D1109_RS01550;Name=D1109_RS01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01550;old_locus_tag=D1109_01545 NZ_CP031858.1 Protein Homology CDS 312337 312972 . - 0 ID=cds-WP_237611272.1;Parent=gene-D1109_RS01550;Dbxref=Genbank:WP_237611272.1;Name=WP_237611272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005613569.1;locus_tag=D1109_RS01550;product=hypothetical protein;protein_id=WP_237611272.1;transl_table=11 NZ_CP031858.1 RefSeq gene 313248 313772 . - . ID=gene-D1109_RS01555;Name=D1109_RS01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01555;old_locus_tag=D1109_01550 NZ_CP031858.1 Protein Homology CDS 313248 313772 . - 0 ID=cds-WP_237611273.1;Parent=gene-D1109_RS01555;Dbxref=Genbank:WP_237611273.1;Name=WP_237611273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005641707.1;locus_tag=D1109_RS01555;product=hypothetical protein;protein_id=WP_237611273.1;transl_table=11 NZ_CP031858.1 RefSeq gene 314424 314642 . + . ID=gene-D1109_RS01560;Name=D1109_RS01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01560;old_locus_tag=D1109_01555 NZ_CP031858.1 Protein Homology CDS 314424 314642 . + 0 ID=cds-WP_237611274.1;Parent=gene-D1109_RS01560;Dbxref=Genbank:WP_237611274.1;Name=WP_237611274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991290.1;locus_tag=D1109_RS01560;product=hypothetical protein;protein_id=WP_237611274.1;transl_table=11 NZ_CP031858.1 RefSeq gene 314652 314921 . + . ID=gene-D1109_RS01565;Name=D1109_RS01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01565;old_locus_tag=D1109_01560 NZ_CP031858.1 GeneMarkS-2+ CDS 314652 314921 . + 0 ID=cds-WP_237611275.1;Parent=gene-D1109_RS01565;Dbxref=Genbank:WP_237611275.1;Name=WP_237611275.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=D1109_RS01565;product=hypothetical protein;protein_id=WP_237611275.1;transl_table=11 NZ_CP031858.1 RefSeq gene 314911 315207 . + . ID=gene-D1109_RS01570;Name=D1109_RS01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01570;old_locus_tag=D1109_01565 NZ_CP031858.1 Protein Homology CDS 314911 315207 . + 0 ID=cds-WP_237611276.1;Parent=gene-D1109_RS01570;Dbxref=Genbank:WP_237611276.1;Name=WP_237611276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596635.1;locus_tag=D1109_RS01570;product=hypothetical protein;protein_id=WP_237611276.1;transl_table=11 NZ_CP031858.1 RefSeq gene 315229 315543 . + . ID=gene-D1109_RS01575;Name=D1109_RS01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01575;old_locus_tag=D1109_01570 NZ_CP031858.1 Protein Homology CDS 315229 315543 . + 0 ID=cds-WP_237611277.1;Parent=gene-D1109_RS01575;Dbxref=Genbank:WP_237611277.1;Name=WP_237611277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596633.1;locus_tag=D1109_RS01575;product=DUF6378 domain-containing protein;protein_id=WP_237611277.1;transl_table=11 NZ_CP031858.1 RefSeq gene 315606 315965 . + . ID=gene-D1109_RS01580;Name=D1109_RS01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01580;old_locus_tag=D1109_01575 NZ_CP031858.1 Protein Homology CDS 315606 315965 . + 0 ID=cds-WP_237611278.1;Parent=gene-D1109_RS01580;Dbxref=Genbank:WP_237611278.1;Name=WP_237611278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250991.1;locus_tag=D1109_RS01580;product=hypothetical protein;protein_id=WP_237611278.1;transl_table=11 NZ_CP031858.1 RefSeq gene 316037 316840 . + . ID=gene-D1109_RS01585;Name=D1109_RS01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01585;old_locus_tag=D1109_01580 NZ_CP031858.1 Protein Homology CDS 316037 316840 . + 0 ID=cds-WP_237611279.1;Parent=gene-D1109_RS01585;Dbxref=Genbank:WP_237611279.1;Name=WP_237611279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248792.1;locus_tag=D1109_RS01585;product=YfdQ family protein;protein_id=WP_237611279.1;transl_table=11 NZ_CP031858.1 RefSeq gene 316910 317386 . + . ID=gene-D1109_RS01590;Name=D1109_RS01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01590 NZ_CP031858.1 Protein Homology CDS 316910 317386 . + 0 ID=cds-WP_237611280.1;Parent=gene-D1109_RS01590;Dbxref=Genbank:WP_237611280.1;Name=WP_237611280.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016343.2;locus_tag=D1109_RS01590;product=DUF551 domain-containing protein;protein_id=WP_237611280.1;transl_table=11 NZ_CP031858.1 RefSeq gene 317404 317610 . + . ID=gene-D1109_RS01595;Name=D1109_RS01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01595;old_locus_tag=D1109_01590 NZ_CP031858.1 GeneMarkS-2+ CDS 317404 317610 . + 0 ID=cds-WP_237611281.1;Parent=gene-D1109_RS01595;Dbxref=Genbank:WP_237611281.1;Name=WP_237611281.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=D1109_RS01595;product=hypothetical protein;protein_id=WP_237611281.1;transl_table=11 NZ_CP031858.1 RefSeq gene 317668 318456 . + . ID=gene-D1109_RS01600;Name=D1109_RS01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01600;old_locus_tag=D1109_01595 NZ_CP031858.1 Protein Homology CDS 317668 318456 . + 0 ID=cds-WP_237611282.1;Parent=gene-D1109_RS01600;Dbxref=Genbank:WP_237611282.1;Name=WP_237611282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596626.1;locus_tag=D1109_RS01600;product=DNA methyltransferase;protein_id=WP_237611282.1;transl_table=11 NZ_CP031858.1 RefSeq gene 318440 318967 . + . ID=gene-D1109_RS01605;Name=D1109_RS01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01605;old_locus_tag=D1109_01600 NZ_CP031858.1 Protein Homology CDS 318440 318967 . + 0 ID=cds-WP_005609877.1;Parent=gene-D1109_RS01605;Dbxref=Genbank:WP_005609877.1;Name=WP_005609877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596624.1;locus_tag=D1109_RS01605;product=class I SAM-dependent methyltransferase;protein_id=WP_005609877.1;transl_table=11 NZ_CP031858.1 RefSeq gene 319112 319333 . + . ID=gene-D1109_RS01610;Name=D1109_RS01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01610;old_locus_tag=D1109_01605 NZ_CP031858.1 Protein Homology CDS 319112 319333 . + 0 ID=cds-WP_237611283.1;Parent=gene-D1109_RS01610;Dbxref=Genbank:WP_237611283.1;Name=WP_237611283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005609876.1;locus_tag=D1109_RS01610;product=hypothetical protein;protein_id=WP_237611283.1;transl_table=11 NZ_CP031858.1 RefSeq gene 319352 319579 . + . ID=gene-D1109_RS01615;Name=D1109_RS01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01615;old_locus_tag=D1109_01610 NZ_CP031858.1 Protein Homology CDS 319352 319579 . + 0 ID=cds-WP_237611284.1;Parent=gene-D1109_RS01615;Dbxref=Genbank:WP_237611284.1;Name=WP_237611284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005607263.1;locus_tag=D1109_RS01615;product=DUF4224 domain-containing protein;protein_id=WP_237611284.1;transl_table=11 NZ_CP031858.1 RefSeq gene 319589 320629 . + . ID=gene-D1109_RS01620;Name=D1109_RS01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01620;old_locus_tag=D1109_01615 NZ_CP031858.1 Protein Homology CDS 319589 320629 . + 0 ID=cds-WP_237611285.1;Parent=gene-D1109_RS01620;Dbxref=Genbank:WP_237611285.1;Name=WP_237611285.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252701.1;locus_tag=D1109_RS01620;product=tyrosine-type recombinase/integrase;protein_id=WP_237611285.1;transl_table=11 NZ_CP031858.1 RefSeq gene 320787 321074 . - . ID=gene-D1109_RS01625;Name=rplY;gbkey=Gene;gene=rplY;gene_biotype=protein_coding;locus_tag=D1109_RS01625;old_locus_tag=D1109_01620 NZ_CP031858.1 Protein Homology CDS 320787 321074 . - 0 ID=cds-WP_005596621.1;Parent=gene-D1109_RS01625;Dbxref=Genbank:WP_005596621.1;Name=WP_005596621.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplY;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005622563.1;locus_tag=D1109_RS01625;product=50S ribosomal protein L25;protein_id=WP_005596621.1;transl_table=11 NZ_CP031858.1 RefSeq gene 321260 322528 . - . ID=gene-D1109_RS01630;Name=D1109_RS01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01630;old_locus_tag=D1109_01625 NZ_CP031858.1 Protein Homology CDS 321260 322528 . - 0 ID=cds-WP_005596620.1;Parent=gene-D1109_RS01630;Dbxref=Genbank:WP_005596620.1;Name=WP_005596620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600593.1;locus_tag=D1109_RS01630;product=malic enzyme;protein_id=WP_005596620.1;transl_table=11 NZ_CP031858.1 RefSeq gene 322845 323603 . + . ID=gene-D1109_RS01635;Name=D1109_RS01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01635;old_locus_tag=D1109_01630 NZ_CP031858.1 Protein Homology CDS 322845 323603 . + 0 ID=cds-WP_009875566.1;Parent=gene-D1109_RS01635;Dbxref=Genbank:WP_009875566.1;Name=WP_009875566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600591.1;locus_tag=D1109_RS01635;product=YdcF family protein;protein_id=WP_009875566.1;transl_table=11 NZ_CP031858.1 RefSeq gene 323638 324552 . - . ID=gene-D1109_RS01640;Name=D1109_RS01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01640;old_locus_tag=D1109_01635 NZ_CP031858.1 Protein Homology CDS 323638 324552 . - 0 ID=cds-WP_005614736.1;Parent=gene-D1109_RS01640;Dbxref=Genbank:WP_005614736.1;Name=WP_005614736.1;Ontology_term=GO:0016881;gbkey=CDS;go_function=acid-amino acid ligase activity|0016881||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600589.1;locus_tag=D1109_RS01640;product=RimK family alpha-L-glutamate ligase;protein_id=WP_005614736.1;transl_table=11 NZ_CP031858.1 RefSeq gene 324549 325268 . - . ID=gene-D1109_RS01645;Name=nfsA;gbkey=Gene;gene=nfsA;gene_biotype=protein_coding;locus_tag=D1109_RS01645;old_locus_tag=D1109_01640 NZ_CP031858.1 Protein Homology CDS 324549 325268 . - 0 ID=cds-WP_011848385.1;Parent=gene-D1109_RS01645;Dbxref=Genbank:WP_011848385.1;Name=WP_011848385.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nfsA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618847.1;locus_tag=D1109_RS01645;product=oxygen-insensitive NADPH nitroreductase;protein_id=WP_011848385.1;transl_table=11 NZ_CP031858.1 RefSeq gene 325343 325630 . - . ID=gene-D1109_RS01650;Name=D1109_RS01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01650;old_locus_tag=D1109_01645 NZ_CP031858.1 Protein Homology CDS 325343 325630 . - 0 ID=cds-WP_005600586.1;Parent=gene-D1109_RS01650;Dbxref=Genbank:WP_005600586.1;Name=WP_005600586.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600586.1;locus_tag=D1109_RS01650;product=metalloregulator ArsR/SmtB family transcription factor;protein_id=WP_005600586.1;transl_table=11 NZ_CP031858.1 RefSeq gene 325785 325997 . + . ID=gene-D1109_RS01655;Name=D1109_RS01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01655;old_locus_tag=D1109_01650 NZ_CP031858.1 Protein Homology CDS 325785 325997 . + 0 ID=cds-WP_005600584.1;Parent=gene-D1109_RS01655;Dbxref=Genbank:WP_005600584.1;Name=WP_005600584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596613.1;locus_tag=D1109_RS01655;product=DUF2892 domain-containing protein;protein_id=WP_005600584.1;transl_table=11 NZ_CP031858.1 RefSeq gene 326042 327385 . + . ID=gene-D1109_RS01660;Name=D1109_RS01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01660;old_locus_tag=D1109_01655 NZ_CP031858.1 Protein Homology CDS 326042 327385 . + 0 ID=cds-WP_011848384.1;Parent=gene-D1109_RS01660;Dbxref=Genbank:WP_011848384.1;Name=WP_011848384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011848384.1;locus_tag=D1109_RS01660;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_011848384.1;transl_table=11 NZ_CP031858.1 RefSeq gene 327396 327737 . + . ID=gene-D1109_RS01665;Name=D1109_RS01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01665;old_locus_tag=D1109_01660 NZ_CP031858.1 Protein Homology CDS 327396 327737 . + 0 ID=cds-WP_005596610.1;Parent=gene-D1109_RS01665;Dbxref=Genbank:WP_005596610.1;Name=WP_005596610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005607251.1;locus_tag=D1109_RS01665;product=DUF5368 family protein;protein_id=WP_005596610.1;transl_table=11 NZ_CP031858.1 RefSeq gene 327752 328756 . + . ID=gene-D1109_RS01670;Name=D1109_RS01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01670;old_locus_tag=D1109_01665 NZ_CP031858.1 Protein Homology CDS 327752 328756 . + 0 ID=cds-WP_005614728.1;Parent=gene-D1109_RS01670;Dbxref=Genbank:WP_005614728.1;Name=WP_005614728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005607248.1;locus_tag=D1109_RS01670;product=SLAC1 anion channel family protein;protein_id=WP_005614728.1;transl_table=11 NZ_CP031858.1 RefSeq gene 328783 329118 . + . ID=gene-D1109_RS01675;Name=D1109_RS01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01675;old_locus_tag=D1109_01670 NZ_CP031858.1 Protein Homology CDS 328783 329118 . + 0 ID=cds-WP_005596608.1;Parent=gene-D1109_RS01675;Dbxref=Genbank:WP_005596608.1;Name=WP_005596608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005614726.1;locus_tag=D1109_RS01675;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_005596608.1;transl_table=11 NZ_CP031858.1 RefSeq gene 329188 329949 . - . ID=gene-D1109_RS01680;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=D1109_RS01680;old_locus_tag=D1109_01675 NZ_CP031858.1 Protein Homology CDS 329188 329949 . - 0 ID=cds-WP_237611286.1;Parent=gene-D1109_RS01680;Dbxref=Genbank:WP_237611286.1;Name=WP_237611286.1;Ontology_term=GO:0009252,GO:0009274,GO:0016021;gbkey=CDS;gene=mtgA;go_component=peptidoglycan-based cell wall|0009274||IEA,integral component of membrane|0016021||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005616995.1;locus_tag=D1109_RS01680;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WP_237611286.1;transl_table=11 NZ_CP031858.1 RefSeq gene 329978 330286 . - . ID=gene-D1109_RS01685;Name=trpR;gbkey=Gene;gene=trpR;gene_biotype=protein_coding;locus_tag=D1109_RS01685;old_locus_tag=D1109_01680 NZ_CP031858.1 Protein Homology CDS 329978 330286 . - 0 ID=cds-WP_237611287.1;Parent=gene-D1109_RS01685;Dbxref=Genbank:WP_237611287.1;Name=WP_237611287.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=trpR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596606.1;locus_tag=D1109_RS01685;product=trp operon repressor;protein_id=WP_237611287.1;transl_table=11 NZ_CP031858.1 RefSeq gene 330361 331002 . - . ID=gene-D1109_RS01690;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=D1109_RS01690;old_locus_tag=D1109_01685 NZ_CP031858.1 Protein Homology CDS 330361 331002 . - 0 ID=cds-WP_005600572.1;Parent=gene-D1109_RS01690;Dbxref=Genbank:WP_005600572.1;Name=WP_005600572.1;Ontology_term=GO:0009306,GO:0008320;gbkey=CDS;gene=lolA;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600572.1;locus_tag=D1109_RS01690;product=outer membrane lipoprotein chaperone LolA;protein_id=WP_005600572.1;transl_table=11 NZ_CP031858.1 RefSeq gene 331142 331435 . - . ID=gene-D1109_RS01695;Name=D1109_RS01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01695;old_locus_tag=D1109_01690 NZ_CP031858.1 Protein Homology CDS 331142 331435 . - 0 ID=cds-WP_005607245.1;Parent=gene-D1109_RS01695;Dbxref=Genbank:WP_005607245.1;Name=WP_005607245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005607245.1;locus_tag=D1109_RS01695;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_005607245.1;transl_table=11 NZ_CP031858.1 RefSeq gene 331425 331577 . - . ID=gene-D1109_RS01700;Name=D1109_RS01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01700 NZ_CP031858.1 Protein Homology CDS 331425 331577 . - 0 ID=cds-WP_005607243.1;Parent=gene-D1109_RS01700;Dbxref=Genbank:WP_005607243.1;Name=WP_005607243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005607243.1;locus_tag=D1109_RS01700;product=hypothetical protein;protein_id=WP_005607243.1;transl_table=11 NZ_CP031858.1 RefSeq gene 331676 334549 . - . ID=gene-D1109_RS01705;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=D1109_RS01705;old_locus_tag=D1109_01695 NZ_CP031858.1 Protein Homology CDS 331676 334549 . - 0 ID=cds-WP_237611288.1;Parent=gene-D1109_RS01705;Dbxref=Genbank:WP_237611288.1;Name=WP_237611288.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-dependent DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005611716.1;locus_tag=D1109_RS01705;product=DNA polymerase I;protein_id=WP_237611288.1;transl_table=11 NZ_CP031858.1 RefSeq gene 334730 335014 . + . ID=gene-D1109_RS01710;Name=D1109_RS01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01710;old_locus_tag=D1109_01700 NZ_CP031858.1 Protein Homology CDS 334730 335014 . + 0 ID=cds-WP_005609858.1;Parent=gene-D1109_RS01710;Dbxref=Genbank:WP_005609858.1;Name=WP_005609858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005607240.1;locus_tag=D1109_RS01710;product=hypothetical protein;protein_id=WP_005609858.1;transl_table=11 NZ_CP031858.1 RefSeq gene 335023 335316 . + . ID=gene-D1109_RS01715;Name=D1109_RS01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01715;old_locus_tag=D1109_01705 NZ_CP031858.1 Protein Homology CDS 335023 335316 . + 0 ID=cds-WP_005600567.1;Parent=gene-D1109_RS01715;Dbxref=Genbank:WP_005600567.1;Name=WP_005600567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600567.1;locus_tag=D1109_RS01715;product=hypothetical protein;protein_id=WP_005600567.1;transl_table=11 NZ_CP031858.1 RefSeq gene 335393 336202 . - . ID=gene-D1109_RS01720;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=D1109_RS01720;old_locus_tag=D1109_01710 NZ_CP031858.1 Protein Homology CDS 335393 336202 . - 0 ID=cds-WP_012262828.1;Parent=gene-D1109_RS01720;Dbxref=Genbank:WP_012262828.1;Name=WP_012262828.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005603844.1;locus_tag=D1109_RS01720;product=tryptophan synthase subunit alpha;protein_id=WP_012262828.1;transl_table=11 NZ_CP031858.1 RefSeq gene 336204 337394 . - . ID=gene-D1109_RS01725;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=D1109_RS01725;old_locus_tag=D1109_01715 NZ_CP031858.1 Protein Homology CDS 336204 337394 . - 0 ID=cds-WP_237611289.1;Parent=gene-D1109_RS01725;Dbxref=Genbank:WP_237611289.1;Name=WP_237611289.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005693932.1;locus_tag=D1109_RS01725;product=tryptophan synthase subunit beta;protein_id=WP_237611289.1;transl_table=11 NZ_CP031858.1 RefSeq gene 337580 338329 . - . ID=gene-D1109_RS01730;Name=D1109_RS01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01730;old_locus_tag=D1109_01720 NZ_CP031858.1 Protein Homology CDS 337580 338329 . - 0 ID=cds-WP_237611290.1;Parent=gene-D1109_RS01730;Dbxref=Genbank:WP_237611290.1;Name=WP_237611290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596598.1;locus_tag=D1109_RS01730;product=SDR family oxidoreductase;protein_id=WP_237611290.1;transl_table=11 NZ_CP031858.1 RefSeq gene 338419 338865 . - . ID=gene-D1109_RS01735;Name=D1109_RS01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01735;old_locus_tag=D1109_01725 NZ_CP031858.1 Protein Homology CDS 338419 338865 . - 0 ID=cds-WP_005609854.1;Parent=gene-D1109_RS01735;Dbxref=Genbank:WP_005609854.1;Name=WP_005609854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005622439.1;locus_tag=D1109_RS01735;product=YcgN family cysteine cluster protein;protein_id=WP_005609854.1;transl_table=11 NZ_CP031858.1 RefSeq gene 338975 340645 . + . ID=gene-D1109_RS01740;Name=D1109_RS01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01740;old_locus_tag=D1109_01730 NZ_CP031858.1 Protein Homology CDS 338975 340645 . + 0 ID=cds-WP_237611291.1;Parent=gene-D1109_RS01740;Dbxref=Genbank:WP_237611291.1;Name=WP_237611291.1;Ontology_term=GO:0004329,GO:0005524;gbkey=CDS;go_function=formate-tetrahydrofolate ligase activity|0004329||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652291.1;locus_tag=D1109_RS01740;product=formate--tetrahydrofolate ligase;protein_id=WP_237611291.1;transl_table=11 NZ_CP031858.1 RefSeq gene 340751 341071 . - . ID=gene-D1109_RS01745;Name=D1109_RS01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01745;old_locus_tag=D1109_01735 NZ_CP031858.1 Protein Homology CDS 340751 341071 . - 0 ID=cds-WP_237611292.1;Parent=gene-D1109_RS01745;Dbxref=Genbank:WP_237611292.1;Name=WP_237611292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600559.1;locus_tag=D1109_RS01745;product=YbjQ family protein;protein_id=WP_237611292.1;transl_table=11 NZ_CP031858.1 RefSeq gene 341099 341695 . - . ID=gene-D1109_RS01750;Name=rdgB;gbkey=Gene;gene=rdgB;gene_biotype=protein_coding;locus_tag=D1109_RS01750;old_locus_tag=D1109_01740 NZ_CP031858.1 Protein Homology CDS 341099 341695 . - 0 ID=cds-WP_005600557.1;Parent=gene-D1109_RS01750;Dbxref=Genbank:WP_005600557.1;Name=WP_005600557.1;Ontology_term=GO:0006281,GO:0016462;gbkey=CDS;gene=rdgB;go_function=pyrophosphatase activity|0016462||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596592.1;locus_tag=D1109_RS01750;product=RdgB/HAM1 family non-canonical purine NTP pyrophosphatase;protein_id=WP_005600557.1;transl_table=11 NZ_CP031858.1 RefSeq gene 341736 342254 . - . ID=gene-D1109_RS01755;Name=D1109_RS01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01755;old_locus_tag=D1109_01745 NZ_CP031858.1 Protein Homology CDS 341736 342254 . - 0 ID=cds-WP_005596590.1;Parent=gene-D1109_RS01755;Dbxref=Genbank:WP_005596590.1;Name=WP_005596590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652289.1;locus_tag=D1109_RS01755;product=GNAT family N-acetyltransferase;protein_id=WP_005596590.1;transl_table=11 NZ_CP031858.1 RefSeq gene 342277 343992 . - . ID=gene-D1109_RS01760;Name=narQ;gbkey=Gene;gene=narQ;gene_biotype=protein_coding;locus_tag=D1109_RS01760;old_locus_tag=D1109_01750 NZ_CP031858.1 Protein Homology CDS 342277 343992 . - 0 ID=cds-WP_237611293.1;Parent=gene-D1109_RS01760;Dbxref=Genbank:WP_237611293.1;Name=WP_237611293.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016021;gbkey=CDS;gene=narQ;go_component=integral component of membrane|0016021||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596587.1;locus_tag=D1109_RS01760;product=nitrate/nitrite two-component system sensor histidine kinase NarQ;protein_id=WP_237611293.1;transl_table=11 NZ_CP031858.1 RefSeq gene 343992 344810 . - . ID=gene-D1109_RS01765;Name=D1109_RS01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01765;old_locus_tag=D1109_01755 NZ_CP031858.1 Protein Homology CDS 343992 344810 . - 0 ID=cds-WP_237611294.1;Parent=gene-D1109_RS01765;Dbxref=Genbank:WP_237611294.1;Name=WP_237611294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596585.1;locus_tag=D1109_RS01765;product=pyridoxal phosphatase;protein_id=WP_237611294.1;transl_table=11 NZ_CP031858.1 RefSeq gene 344892 345743 . - . ID=gene-D1109_RS01770;Name=D1109_RS01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01770;old_locus_tag=D1109_01760 NZ_CP031858.1 Protein Homology CDS 344892 345743 . - 0 ID=cds-WP_237611295.1;Parent=gene-D1109_RS01770;Dbxref=Genbank:WP_237611295.1;Name=WP_237611295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596583.1;locus_tag=D1109_RS01770;product=OmpA family protein;protein_id=WP_237611295.1;transl_table=11 NZ_CP031858.1 RefSeq gene 345877 347592 . - . ID=gene-D1109_RS01775;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=D1109_RS01775;old_locus_tag=D1109_01765 NZ_CP031858.1 Protein Homology CDS 345877 347592 . - 0 ID=cds-WP_215577868.1;Parent=gene-D1109_RS01775;Dbxref=Genbank:WP_215577868.1;Name=WP_215577868.1;Ontology_term=GO:0006310,GO:0008297;gbkey=CDS;gene=recJ;go_function=single-stranded DNA exodeoxyribonuclease activity|0008297||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005616987.1;locus_tag=D1109_RS01775;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_215577868.1;transl_table=11 NZ_CP031858.1 RefSeq gene 347684 348379 . - . ID=gene-D1109_RS01780;Name=dsbC;gbkey=Gene;gene=dsbC;gene_biotype=protein_coding;locus_tag=D1109_RS01780;old_locus_tag=D1109_01770 NZ_CP031858.1 Protein Homology CDS 347684 348379 . - 0 ID=cds-WP_005596579.1;Parent=gene-D1109_RS01780;Dbxref=Genbank:WP_005596579.1;Name=WP_005596579.1;Ontology_term=GO:0042597;gbkey=CDS;gene=dsbC;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596579.1;locus_tag=D1109_RS01780;product=bifunctional protein-disulfide isomerase/oxidoreductase DsbC;protein_id=WP_005596579.1;transl_table=11 NZ_CP031858.1 RefSeq gene 348398 349888 . - . ID=gene-D1109_RS01785;Name=mepM;gbkey=Gene;gene=mepM;gene_biotype=protein_coding;locus_tag=D1109_RS01785;old_locus_tag=D1109_01775 NZ_CP031858.1 Protein Homology CDS 348398 349888 . - 0 ID=cds-WP_005614695.1;Parent=gene-D1109_RS01785;Dbxref=Genbank:WP_005614695.1;Name=WP_005614695.1;Ontology_term=GO:0042834;gbkey=CDS;gene=mepM;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875171.1;locus_tag=D1109_RS01785;product=murein DD-endopeptidase MepM;protein_id=WP_005614695.1;transl_table=11 NZ_CP031858.1 RefSeq gene 350092 350892 . + . ID=gene-D1109_RS01790;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;locus_tag=D1109_RS01790;old_locus_tag=D1109_01780 NZ_CP031858.1 Protein Homology CDS 350092 350892 . + 0 ID=cds-WP_005596575.1;Parent=gene-D1109_RS01790;Dbxref=Genbank:WP_005596575.1;Name=WP_005596575.1;Ontology_term=GO:0006829,GO:0005524,GO:0015633;gbkey=CDS;gene=znuC;go_function=ATP binding|0005524||IEA,ABC-type zinc transporter activity|0015633||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875172.1;locus_tag=D1109_RS01790;product=zinc ABC transporter ATP-binding protein ZnuC;protein_id=WP_005596575.1;transl_table=11 NZ_CP031858.1 RefSeq gene 351135 353945 . + . ID=gene-D1109_RS01795;Name=sucA;gbkey=Gene;gene=sucA;gene_biotype=protein_coding;locus_tag=D1109_RS01795;old_locus_tag=D1109_01785 NZ_CP031858.1 Protein Homology CDS 351135 353945 . + 0 ID=cds-WP_237611296.1;Parent=gene-D1109_RS01795;Dbxref=Genbank:WP_237611296.1;Name=WP_237611296.1;Ontology_term=GO:0006099,GO:0006554,GO:0006568,GO:0004591,GO:0045252;gbkey=CDS;gene=sucA;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,lysine catabolic process|0006554||IEA,tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596572.1;locus_tag=D1109_RS01795;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_237611296.1;transl_table=11 NZ_CP031858.1 RefSeq gene 354065 355294 . + . ID=gene-D1109_RS01800;Name=odhB;gbkey=Gene;gene=odhB;gene_biotype=protein_coding;locus_tag=D1109_RS01800;old_locus_tag=D1109_01790 NZ_CP031858.1 Protein Homology CDS 354065 355294 . + 0 ID=cds-WP_005600546.1;Parent=gene-D1109_RS01800;Dbxref=Genbank:WP_005600546.1;Name=WP_005600546.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=odhB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005654196.1;locus_tag=D1109_RS01800;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_005600546.1;transl_table=11 NZ_CP031858.1 RefSeq gene 355437 356303 . + . ID=gene-D1109_RS01805;Name=D1109_RS01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01805;old_locus_tag=D1109_01795 NZ_CP031858.1 Protein Homology CDS 355437 356303 . + 0 ID=cds-WP_005596568.1;Parent=gene-D1109_RS01805;Dbxref=Genbank:WP_005596568.1;Name=WP_005596568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005607216.1;locus_tag=D1109_RS01805;product=VirK/YbjX family protein;protein_id=WP_005596568.1;transl_table=11 NZ_CP031858.1 RefSeq gene 356447 357613 . + . ID=gene-D1109_RS01810;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=D1109_RS01810;old_locus_tag=D1109_01800 NZ_CP031858.1 Protein Homology CDS 356447 357613 . + 0 ID=cds-WP_237611297.1;Parent=gene-D1109_RS01810;Dbxref=Genbank:WP_237611297.1;Name=WP_237611297.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596567.1;locus_tag=D1109_RS01810;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_237611297.1;transl_table=11 NZ_CP031858.1 RefSeq gene 357616 358488 . + . ID=gene-D1109_RS01815;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=D1109_RS01815;old_locus_tag=D1109_01805 NZ_CP031858.1 Protein Homology CDS 357616 358488 . + 0 ID=cds-WP_005596564.1;Parent=gene-D1109_RS01815;Dbxref=Genbank:WP_005596564.1;Name=WP_005596564.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596564.1;locus_tag=D1109_RS01815;product=succinate--CoA ligase subunit alpha;protein_id=WP_005596564.1;transl_table=11 NZ_CP031858.1 RefSeq gene 358623 359594 . - . ID=gene-D1109_RS01820;Name=mglB;gbkey=Gene;gene=mglB;gene_biotype=protein_coding;locus_tag=D1109_RS01820;old_locus_tag=D1109_01810 NZ_CP031858.1 Protein Homology CDS 358623 359594 . - 0 ID=cds-WP_005596562.1;Parent=gene-D1109_RS01820;Dbxref=Genbank:WP_005596562.1;Name=WP_005596562.1;Ontology_term=GO:0030246;gbkey=CDS;gene=mglB;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011848379.1;locus_tag=D1109_RS01820;product=galactose/glucose ABC transporter substrate-binding protein MglB;protein_id=WP_005596562.1;transl_table=11 NZ_CP031858.1 RefSeq gene 359800 361317 . - . ID=gene-D1109_RS01825;Name=D1109_RS01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01825;old_locus_tag=D1109_01815 NZ_CP031858.1 Protein Homology CDS 359800 361317 . - 0 ID=cds-WP_237611298.1;Parent=gene-D1109_RS01825;Dbxref=Genbank:WP_237611298.1;Name=WP_237611298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875174.1;locus_tag=D1109_RS01825;product=Na+/H+ antiporter NhaC family protein;protein_id=WP_237611298.1;transl_table=11 NZ_CP031858.1 cmsearch riboswitch 361443 361614 . - . ID=id-NZ_CP031858.1:361443..361614;Dbxref=RFAM:RF00168;Note=Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis%2C transport and catabolism;bound_moiety=lysine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP031858.1 RefSeq gene 361875 362282 . + . ID=gene-D1109_RS01830;Name=D1109_RS01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01830;old_locus_tag=D1109_01820 NZ_CP031858.1 Protein Homology CDS 361875 362282 . + 0 ID=cds-WP_005596557.1;Parent=gene-D1109_RS01830;Dbxref=Genbank:WP_005596557.1;Name=WP_005596557.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005460020.1;locus_tag=D1109_RS01830;product=H-NS histone family protein;protein_id=WP_005596557.1;transl_table=11 NZ_CP031858.1 RefSeq gene 362750 364345 . + . ID=gene-D1109_RS01835;Name=D1109_RS01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01835;old_locus_tag=D1109_01825 NZ_CP031858.1 Protein Homology CDS 362750 364345 . + 0 ID=cds-WP_237611299.1;Parent=gene-D1109_RS01835;Dbxref=Genbank:WP_237611299.1;Name=WP_237611299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005818537.1;locus_tag=D1109_RS01835;product=L-lactate permease;protein_id=WP_237611299.1;transl_table=11 NZ_CP031858.1 RefSeq gene 364515 365240 . + . ID=gene-D1109_RS01840;Name=D1109_RS01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01840;old_locus_tag=D1109_01830 NZ_CP031858.1 Protein Homology CDS 364515 365240 . + 0 ID=cds-WP_005611668.1;Parent=gene-D1109_RS01840;Dbxref=Genbank:WP_005611668.1;Name=WP_005611668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596552.1;locus_tag=D1109_RS01840;product=(Fe-S)-binding protein;protein_id=WP_005611668.1;transl_table=11 NZ_CP031858.1 RefSeq gene 365250 366659 . + . ID=gene-D1109_RS01845;Name=D1109_RS01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01845;old_locus_tag=D1109_01835 NZ_CP031858.1 Protein Homology CDS 365250 366659 . + 0 ID=cds-WP_237611300.1;Parent=gene-D1109_RS01845;Dbxref=Genbank:WP_237611300.1;Name=WP_237611300.1;Ontology_term=GO:0019516,GO:0009055,GO:0051536;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=lactate oxidation|0019516||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005619537.1;locus_tag=D1109_RS01845;product=LutB/LldF family L-lactate oxidation iron-sulfur protein;protein_id=WP_237611300.1;transl_table=11 NZ_CP031858.1 RefSeq gene 366788 367486 . + . ID=gene-D1109_RS01850;Name=D1109_RS01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01850;old_locus_tag=D1109_01840 NZ_CP031858.1 Protein Homology CDS 366788 367486 . + 0 ID=cds-WP_237611301.1;Parent=gene-D1109_RS01850;Dbxref=Genbank:WP_237611301.1;Name=WP_237611301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005614693.1;locus_tag=D1109_RS01850;product=lactate utilization protein C;protein_id=WP_237611301.1;transl_table=11 NZ_CP031858.1 RefSeq gene 367757 377524 . - . ID=gene-D1109_RS01855;Name=D1109_RS01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01855;old_locus_tag=D1109_01845 NZ_CP031858.1 Protein Homology CDS 367757 377524 . - 0 ID=cds-WP_237611302.1;Parent=gene-D1109_RS01855;Dbxref=Genbank:WP_237611302.1;Name=WP_237611302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011848378.1;locus_tag=D1109_RS01855;product=YadA-like family protein;protein_id=WP_237611302.1;transl_table=11 NZ_CP031858.1 RefSeq gene 377596 378636 . + . ID=gene-D1109_RS01860;Name=D1109_RS01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01860;old_locus_tag=D1109_01850 NZ_CP031858.1 Protein Homology CDS 377596 378636 . + 0 ID=cds-WP_005603118.1-2;Parent=gene-D1109_RS01860;Dbxref=Genbank:WP_005603118.1;Name=WP_005603118.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015587011.1;locus_tag=D1109_RS01860;product=IS481 family transposase;protein_id=WP_005603118.1;transl_table=11 NZ_CP031858.1 RefSeq gene 378670 379011 . - . ID=gene-D1109_RS01865;Name=D1109_RS01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01865;old_locus_tag=D1109_01855 NZ_CP031858.1 Protein Homology CDS 378670 379011 . - 0 ID=cds-WP_237611303.1;Parent=gene-D1109_RS01865;Dbxref=Genbank:WP_237611303.1;Name=WP_237611303.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024418.2;locus_tag=D1109_RS01865;product=ESPR domain-containing protein;protein_id=WP_237611303.1;transl_table=11 NZ_CP031858.1 RefSeq gene 379271 379960 . - . ID=gene-D1109_RS01870;Name=D1109_RS01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01870;old_locus_tag=D1109_01860 NZ_CP031858.1 Protein Homology CDS 379271 379960 . - 0 ID=cds-WP_009875081.1;Parent=gene-D1109_RS01870;Dbxref=Genbank:WP_009875081.1;Name=WP_009875081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005619030.1;locus_tag=D1109_RS01870;product=YdcF family protein;protein_id=WP_009875081.1;transl_table=11 NZ_CP031858.1 RefSeq gene 380252 381328 . + . ID=gene-D1109_RS01875;Name=D1109_RS01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01875;old_locus_tag=D1109_01865 NZ_CP031858.1 Protein Homology CDS 380252 381328 . + 0 ID=cds-WP_011848377.1;Parent=gene-D1109_RS01875;Dbxref=Genbank:WP_011848377.1;Name=WP_011848377.1;Ontology_term=GO:0009058,GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012262818.1;locus_tag=D1109_RS01875;product=homoserine O-acetyltransferase;protein_id=WP_011848377.1;transl_table=11 NZ_CP031858.1 RefSeq gene 381408 382205 . - . ID=gene-D1109_RS01880;Name=D1109_RS01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01880;old_locus_tag=D1109_01870 NZ_CP031858.1 Protein Homology CDS 381408 382205 . - 0 ID=cds-WP_005596509.1;Parent=gene-D1109_RS01880;Dbxref=Genbank:WP_005596509.1;Name=WP_005596509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012262817.1;locus_tag=D1109_RS01880;product=class II glutamine amidotransferase;protein_id=WP_005596509.1;transl_table=11 NZ_CP031858.1 RefSeq gene 382384 383169 . - . ID=gene-D1109_RS01885;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;locus_tag=D1109_RS01885;old_locus_tag=D1109_01875 NZ_CP031858.1 Protein Homology CDS 382384 383169 . - 0 ID=cds-WP_005596508.1;Parent=gene-D1109_RS01885;Dbxref=Genbank:WP_005596508.1;Name=WP_005596508.1;Ontology_term=GO:0055085,GO:0042626;gbkey=CDS;gene=znuB;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005607183.1;locus_tag=D1109_RS01885;product=zinc ABC transporter permease subunit ZnuB;protein_id=WP_005596508.1;transl_table=11 NZ_CP031858.1 RefSeq gene 383250 384590 . - . ID=gene-D1109_RS01890;Name=D1109_RS01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01890;old_locus_tag=D1109_01880 NZ_CP031858.1 Protein Homology CDS 383250 384590 . - 0 ID=cds-WP_005603748.1;Parent=gene-D1109_RS01890;Dbxref=Genbank:WP_005603748.1;Name=WP_005603748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012478378.1;locus_tag=D1109_RS01890;product=replication-associated recombination protein A;protein_id=WP_005603748.1;transl_table=11 NZ_CP031858.1 RefSeq gene 384603 385091 . - . ID=gene-D1109_RS01895;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=D1109_RS01895;old_locus_tag=D1109_01885 NZ_CP031858.1 Protein Homology CDS 384603 385091 . - 0 ID=cds-WP_005596506.1;Parent=gene-D1109_RS01895;Dbxref=Genbank:WP_005596506.1;Name=WP_005596506.1;Ontology_term=GO:0008360,GO:0003674;gbkey=CDS;gene=mreD;go_function=molecular_function|0003674||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596506.1;locus_tag=D1109_RS01895;product=rod shape-determining protein MreD;protein_id=WP_005596506.1;transl_table=11 NZ_CP031858.1 RefSeq gene 385091 386140 . - . ID=gene-D1109_RS01900;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=D1109_RS01900;old_locus_tag=D1109_01890 NZ_CP031858.1 Protein Homology CDS 385091 386140 . - 0 ID=cds-WP_005596505.1;Parent=gene-D1109_RS01900;Dbxref=Genbank:WP_005596505.1;Name=WP_005596505.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596505.1;locus_tag=D1109_RS01900;product=rod shape-determining protein MreC;protein_id=WP_005596505.1;transl_table=11 NZ_CP031858.1 RefSeq gene 386257 387309 . - . ID=gene-D1109_RS01905;Name=D1109_RS01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01905;old_locus_tag=D1109_01895 NZ_CP031858.1 Protein Homology CDS 386257 387309 . - 0 ID=cds-WP_005607179.1;Parent=gene-D1109_RS01905;Dbxref=Genbank:WP_005607179.1;Name=WP_005607179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005607179.1;locus_tag=D1109_RS01905;product=rod shape-determining protein;protein_id=WP_005607179.1;transl_table=11 NZ_CP031858.1 RefSeq gene 387504 388508 . - . ID=gene-D1109_RS01910;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=D1109_RS01910;old_locus_tag=D1109_01900 NZ_CP031858.1 Protein Homology CDS 387504 388508 . - 0 ID=cds-WP_005619027.1;Parent=gene-D1109_RS01910;Dbxref=Genbank:WP_005619027.1;Name=WP_005619027.1;Ontology_term=GO:0006094,GO:0006096,GO:0019682;gbkey=CDS;gene=gap;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA,glyceraldehyde-3-phosphate metabolic process|0019682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010129843.1;locus_tag=D1109_RS01910;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_005619027.1;transl_table=11 NZ_CP031858.1 RefSeq gene 388731 389126 . + . ID=gene-D1109_RS01915;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=D1109_RS01915;old_locus_tag=D1109_01905 NZ_CP031858.1 Protein Homology CDS 388731 389126 . + 0 ID=cds-WP_005619026.1;Parent=gene-D1109_RS01915;Dbxref=Genbank:WP_005619026.1;Name=WP_005619026.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012262815.1;locus_tag=D1109_RS01915;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_005619026.1;transl_table=11 NZ_CP031858.1 RefSeq gene 389250 390332 . - . ID=gene-D1109_RS01920;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=D1109_RS01920;old_locus_tag=D1109_01910 NZ_CP031858.1 Protein Homology CDS 389250 390332 . - 0 ID=cds-WP_005611645.1;Parent=gene-D1109_RS01920;Dbxref=Genbank:WP_005611645.1;Name=WP_005611645.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991329.1;locus_tag=D1109_RS01920;product=3-isopropylmalate dehydrogenase;protein_id=WP_005611645.1;transl_table=11 NZ_CP031858.1 RefSeq gene 390446 390676 . + . ID=gene-D1109_RS01925;Name=D1109_RS01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01925;old_locus_tag=D1109_01915 NZ_CP031858.1 Protein Homology CDS 390446 390676 . + 0 ID=cds-WP_005613725.1;Parent=gene-D1109_RS01925;Dbxref=Genbank:WP_005613725.1;Name=WP_005613725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005613725.1;locus_tag=D1109_RS01925;product=YceK/YidQ family lipoprotein;protein_id=WP_005613725.1;transl_table=11 NZ_CP031858.1 RefSeq gene 391387 393567 . - . ID=gene-D1109_RS01930;Name=D1109_RS01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01930;old_locus_tag=D1109_01920 NZ_CP031858.1 Protein Homology CDS 391387 393567 . - 0 ID=cds-WP_237611304.1;Parent=gene-D1109_RS01930;Dbxref=Genbank:WP_237611304.1;Name=WP_237611304.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017826.2;locus_tag=D1109_RS01930;product=DUF927 domain-containing protein;protein_id=WP_237611304.1;transl_table=11 NZ_CP031858.1 RefSeq gene 393641 393874 . - . ID=gene-D1109_RS01935;Name=D1109_RS01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01935;old_locus_tag=D1109_01925 NZ_CP031858.1 GeneMarkS-2+ CDS 393641 393874 . - 0 ID=cds-WP_115590392.1;Parent=gene-D1109_RS01935;Dbxref=Genbank:WP_115590392.1;Name=WP_115590392.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=D1109_RS01935;product=hypothetical protein;protein_id=WP_115590392.1;transl_table=11 NZ_CP031858.1 RefSeq gene 393874 394458 . - . ID=gene-D1109_RS01940;Name=D1109_RS01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01940;old_locus_tag=D1109_01930 NZ_CP031858.1 GeneMarkS-2+ CDS 393874 394458 . - 0 ID=cds-WP_237611305.1;Parent=gene-D1109_RS01940;Dbxref=Genbank:WP_237611305.1;Name=WP_237611305.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=D1109_RS01940;product=hypothetical protein;protein_id=WP_237611305.1;transl_table=11 NZ_CP031858.1 RefSeq gene 394451 395038 . - . ID=gene-D1109_RS01945;Name=D1109_RS01945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01945;old_locus_tag=D1109_01935 NZ_CP031858.1 Protein Homology CDS 394451 395038 . - 0 ID=cds-WP_237611306.1;Parent=gene-D1109_RS01945;Dbxref=Genbank:WP_237611306.1;Name=WP_237611306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005713036.1;locus_tag=D1109_RS01945;product=ash family protein;protein_id=WP_237611306.1;transl_table=11 NZ_CP031858.1 RefSeq gene 395504 395713 . - . ID=gene-D1109_RS01950;Name=D1109_RS01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01950;old_locus_tag=D1109_01945 NZ_CP031858.1 Protein Homology CDS 395504 395713 . - 0 ID=cds-WP_237611307.1;Parent=gene-D1109_RS01950;Dbxref=Genbank:WP_237611307.1;Name=WP_237611307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253560.1;locus_tag=D1109_RS01950;product=helix-turn-helix domain-containing protein;protein_id=WP_237611307.1;transl_table=11 NZ_CP031858.1 RefSeq gene 395863 397083 . - . ID=gene-D1109_RS01955;Name=D1109_RS01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01955;old_locus_tag=D1109_01950 NZ_CP031858.1 GeneMarkS-2+ CDS 395863 397083 . - 0 ID=cds-WP_237611308.1;Parent=gene-D1109_RS01955;Dbxref=Genbank:WP_237611308.1;Name=WP_237611308.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=D1109_RS01955;product=hypothetical protein;protein_id=WP_237611308.1;transl_table=11 NZ_CP031858.1 RefSeq gene 397240 398211 . - . ID=gene-D1109_RS01960;Name=D1109_RS01960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01960;old_locus_tag=D1109_01955 NZ_CP031858.1 Protein Homology CDS 397240 398211 . - 0 ID=cds-WP_237611309.1;Parent=gene-D1109_RS01960;Dbxref=Genbank:WP_237611309.1;Name=WP_237611309.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016981.2;locus_tag=D1109_RS01960;product=phage major capsid protein%2C P2 family;protein_id=WP_237611309.1;transl_table=11 NZ_CP031858.1 RefSeq gene 398214 398894 . - . ID=gene-D1109_RS01965;Name=D1109_RS01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01965;old_locus_tag=D1109_01960 NZ_CP031858.1 GeneMarkS-2+ CDS 398214 398894 . - 0 ID=cds-WP_237611310.1;Parent=gene-D1109_RS01965;Dbxref=Genbank:WP_237611310.1;Name=WP_237611310.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=D1109_RS01965;product=hypothetical protein;protein_id=WP_237611310.1;transl_table=11 NZ_CP031858.1 RefSeq gene 398907 399110 . - . ID=gene-D1109_RS01970;Name=D1109_RS01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01970;old_locus_tag=D1109_01965 NZ_CP031858.1 Protein Homology CDS 398907 399110 . - 0 ID=cds-WP_237611311.1;Parent=gene-D1109_RS01970;Dbxref=Genbank:WP_237611311.1;Name=WP_237611311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018346106.1;locus_tag=D1109_RS01970;product=AlpA family phage regulatory protein;protein_id=WP_237611311.1;transl_table=11 NZ_CP031858.1 RefSeq gene 399674 400888 . - . ID=gene-D1109_RS01975;Name=D1109_RS01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01975;old_locus_tag=D1109_01970 NZ_CP031858.1 Protein Homology CDS 399674 400888 . - 0 ID=cds-WP_237611312.1;Parent=gene-D1109_RS01975;Dbxref=Genbank:WP_237611312.1;Name=WP_237611312.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652247.1;locus_tag=D1109_RS01975;product=tyrosine-type recombinase/integrase;protein_id=WP_237611312.1;transl_table=11 NZ_CP031858.1 RefSeq gene 401119 401195 . - . ID=gene-D1109_RS01980;Name=D1109_RS01980;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS01980;old_locus_tag=D1109_01975 NZ_CP031858.1 tRNAscan-SE tRNA 401119 401195 . - . ID=rna-D1109_RS01980;Parent=gene-D1109_RS01980;anticodon=(pos:complement(401159..401161));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS01980;product=tRNA-Ile NZ_CP031858.1 tRNAscan-SE exon 401119 401195 . - . ID=exon-D1109_RS01980-1;Parent=rna-D1109_RS01980;anticodon=(pos:complement(401159..401161));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS01980;product=tRNA-Ile NZ_CP031858.1 RefSeq gene 401293 402030 . - . ID=gene-D1109_RS01985;Name=pgeF;gbkey=Gene;gene=pgeF;gene_biotype=protein_coding;locus_tag=D1109_RS01985;old_locus_tag=D1109_01980 NZ_CP031858.1 Protein Homology CDS 401293 402030 . - 0 ID=cds-WP_005596495.1;Parent=gene-D1109_RS01985;Dbxref=Genbank:WP_005596495.1;Name=WP_005596495.1;gbkey=CDS;gene=pgeF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005616864.1;locus_tag=D1109_RS01985;product=peptidoglycan editing factor PgeF;protein_id=WP_005596495.1;transl_table=11 NZ_CP031858.1 RefSeq gene 402058 402447 . - . ID=gene-D1109_RS01990;Name=D1109_RS01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS01990;old_locus_tag=D1109_01985 NZ_CP031858.1 Protein Homology CDS 402058 402447 . - 0 ID=cds-WP_005596493.1;Parent=gene-D1109_RS01990;Dbxref=Genbank:WP_005596493.1;Name=WP_005596493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000047544.1;locus_tag=D1109_RS01990;product=RidA family protein;protein_id=WP_005596493.1;transl_table=11 NZ_CP031858.1 RefSeq gene 402540 403541 . + . ID=gene-D1109_RS01995;Name=yejK;gbkey=Gene;gene=yejK;gene_biotype=protein_coding;locus_tag=D1109_RS01995;old_locus_tag=D1109_01990 NZ_CP031858.1 Protein Homology CDS 402540 403541 . + 0 ID=cds-WP_011848375.1;Parent=gene-D1109_RS01995;Dbxref=Genbank:WP_011848375.1;Name=WP_011848375.1;Ontology_term=GO:0009295;gbkey=CDS;gene=yejK;go_component=nucleoid|0009295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005623453.1;locus_tag=D1109_RS01995;product=nucleoid-associated protein YejK;protein_id=WP_011848375.1;transl_table=11 NZ_CP031858.1 RefSeq gene 403612 403956 . + . ID=gene-D1109_RS02000;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=protein_coding;locus_tag=D1109_RS02000;old_locus_tag=D1109_01995 NZ_CP031858.1 Protein Homology CDS 403612 403956 . + 0 ID=cds-WP_005596488.1;Parent=gene-D1109_RS02000;Dbxref=Genbank:WP_005596488.1;Name=WP_005596488.1;gbkey=CDS;gene=bamE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596488.1;locus_tag=D1109_RS02000;product=outer membrane protein assembly factor BamE;protein_id=WP_005596488.1;transl_table=11 NZ_CP031858.1 RefSeq gene 404260 405600 . + . ID=gene-D1109_RS02005;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=protein_coding;locus_tag=D1109_RS02005;old_locus_tag=D1109_02000 NZ_CP031858.1 Protein Homology CDS 404260 405600 . + 0 ID=cds-WP_237611313.1;Parent=gene-D1109_RS02005;Dbxref=Genbank:WP_237611313.1;Name=WP_237611313.1;Ontology_term=GO:0006520,GO:0016639;gbkey=CDS;gene=gdhA;go_function=oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=cellular amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005616859.1;locus_tag=D1109_RS02005;product=NADP-specific glutamate dehydrogenase;protein_id=WP_237611313.1;transl_table=11 NZ_CP031858.1 RefSeq gene 405696 406154 . + . ID=gene-D1109_RS02010;Name=D1109_RS02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02010;old_locus_tag=D1109_02005 NZ_CP031858.1 Protein Homology CDS 405696 406154 . + 0 ID=cds-WP_005600520.1;Parent=gene-D1109_RS02010;Dbxref=Genbank:WP_005600520.1;Name=WP_005600520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596484.1;locus_tag=D1109_RS02010;product=DUF5358 family protein;protein_id=WP_005600520.1;transl_table=11 NZ_CP031858.1 RefSeq gene 406223 407740 . - . ID=gene-D1109_RS02015;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=D1109_RS02015;old_locus_tag=D1109_02010 NZ_CP031858.1 Protein Homology CDS 406223 407740 . - 0 ID=cds-WP_005614650.1;Parent=gene-D1109_RS02015;Dbxref=Genbank:WP_005614650.1;Name=WP_005614650.1;Ontology_term=GO:0009152,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596482.1;locus_tag=D1109_RS02015;product=amidophosphoribosyltransferase;protein_id=WP_005614650.1;transl_table=11 NZ_CP031858.1 RefSeq gene 407754 408257 . - . ID=gene-D1109_RS02020;Name=D1109_RS02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02020;old_locus_tag=D1109_02015 NZ_CP031858.1 Protein Homology CDS 407754 408257 . - 0 ID=cds-WP_005600518.1;Parent=gene-D1109_RS02020;Dbxref=Genbank:WP_005600518.1;Name=WP_005600518.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651805.1;locus_tag=D1109_RS02020;product=CvpA family protein;protein_id=WP_005600518.1;transl_table=11 NZ_CP031858.1 RefSeq gene 408414 408875 . - . ID=gene-D1109_RS02025;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=D1109_RS02025;old_locus_tag=D1109_02020 NZ_CP031858.1 Protein Homology CDS 408414 408875 . - 0 ID=cds-WP_005614648.1;Parent=gene-D1109_RS02025;Dbxref=Genbank:WP_005614648.1;Name=WP_005614648.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991275.1;locus_tag=D1109_RS02025;product=ribonuclease HI;protein_id=WP_005614648.1;transl_table=11 NZ_CP031858.1 RefSeq gene 408997 410328 . - . ID=gene-D1109_RS02030;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=D1109_RS02030;old_locus_tag=D1109_02025 NZ_CP031858.1 Protein Homology CDS 408997 410328 . - 0 ID=cds-WP_011848374.1;Parent=gene-D1109_RS02030;Dbxref=Genbank:WP_011848374.1;Name=WP_011848374.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524,GO:0042803;gbkey=CDS;gene=argG;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018355938.1;locus_tag=D1109_RS02030;product=argininosuccinate synthase;protein_id=WP_011848374.1;transl_table=11 NZ_CP031858.1 RefSeq gene 410572 411609 . + . ID=gene-D1109_RS02035;Name=D1109_RS02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02035;old_locus_tag=D1109_02030 NZ_CP031858.1 Protein Homology CDS 410572 411609 . + 0 ID=cds-WP_005614646.1;Parent=gene-D1109_RS02035;Dbxref=Genbank:WP_005614646.1;Name=WP_005614646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651802.1;locus_tag=D1109_RS02035;product=glycosyltransferase family 9 protein;protein_id=WP_005614646.1;transl_table=11 NZ_CP031858.1 RefSeq gene 411692 412513 . + . ID=gene-D1109_RS02040;Name=D1109_RS02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02040;old_locus_tag=D1109_02035 NZ_CP031858.1 Protein Homology CDS 411692 412513 . + 0 ID=cds-WP_005596473.1;Parent=gene-D1109_RS02040;Dbxref=Genbank:WP_005596473.1;Name=WP_005596473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005603724.1;locus_tag=D1109_RS02040;product=serine hydrolase;protein_id=WP_005596473.1;transl_table=11 NZ_CP031858.1 RefSeq gene 412576 413334 . - . ID=gene-D1109_RS02045;Name=D1109_RS02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02045;old_locus_tag=D1109_02040 NZ_CP031858.1 Protein Homology CDS 412576 413334 . - 0 ID=cds-WP_005596471.1;Parent=gene-D1109_RS02045;Dbxref=Genbank:WP_005596471.1;Name=WP_005596471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596471.1;locus_tag=D1109_RS02045;product=glycosyltransferase family 2 protein;protein_id=WP_005596471.1;transl_table=11 NZ_CP031858.1 RefSeq gene 413456 413773 . + . ID=gene-D1109_RS02050;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=D1109_RS02050;old_locus_tag=D1109_02045 NZ_CP031858.1 Protein Homology CDS 413456 413773 . + 0 ID=cds-WP_005619024.1;Parent=gene-D1109_RS02050;Dbxref=Genbank:WP_005619024.1;Name=WP_005619024.1;Ontology_term=GO:0008150;gbkey=CDS;gene=yhbY;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005622694.1;locus_tag=D1109_RS02050;product=ribosome assembly RNA-binding protein YhbY;protein_id=WP_005619024.1;transl_table=11 NZ_CP031858.1 RefSeq gene 413865 414569 . + . ID=gene-D1109_RS02055;Name=D1109_RS02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02055;old_locus_tag=D1109_02050 NZ_CP031858.1 Protein Homology CDS 413865 414569 . + 0 ID=cds-WP_005603721.1;Parent=gene-D1109_RS02055;Dbxref=Genbank:WP_005603721.1;Name=WP_005603721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005614642.1;locus_tag=D1109_RS02055;product=phosphatase PAP2 family protein;protein_id=WP_005603721.1;transl_table=11 NZ_CP031858.1 RefSeq gene 414572 415489 . + . ID=gene-D1109_RS02060;Name=nagK;gbkey=Gene;gene=nagK;gene_biotype=protein_coding;locus_tag=D1109_RS02060;old_locus_tag=D1109_02055 NZ_CP031858.1 Protein Homology CDS 414572 415489 . + 0 ID=cds-WP_005596465.1;Parent=gene-D1109_RS02060;Dbxref=Genbank:WP_005596465.1;Name=WP_005596465.1;Ontology_term=GO:0045127;gbkey=CDS;gene=nagK;go_function=N-acetylglucosamine kinase activity|0045127||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005708433.1;locus_tag=D1109_RS02060;product=N-acetylglucosamine kinase;protein_id=WP_005596465.1;transl_table=11 NZ_CP031858.1 RefSeq gene 415548 416255 . + . ID=gene-D1109_RS02065;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=D1109_RS02065;old_locus_tag=D1109_02060 NZ_CP031858.1 Protein Homology CDS 415548 416255 . + 0 ID=cds-WP_005611589.1;Parent=gene-D1109_RS02065;Dbxref=Genbank:WP_005611589.1;Name=WP_005611589.1;Ontology_term=GO:0019243,GO:0004416;gbkey=CDS;gene=gloB;go_function=hydroxyacylglutathione hydrolase activity|0004416||IEA;go_process=methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione|0019243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651697.1;locus_tag=D1109_RS02065;product=hydroxyacylglutathione hydrolase;protein_id=WP_005611589.1;transl_table=11 NZ_CP031858.1 RefSeq gene 416448 417140 . + . ID=gene-D1109_RS02070;Name=uppS;gbkey=Gene;gene=uppS;gene_biotype=protein_coding;locus_tag=D1109_RS02070;old_locus_tag=D1109_02065 NZ_CP031858.1 Protein Homology CDS 416448 417140 . + 0 ID=cds-WP_005596461.1;Parent=gene-D1109_RS02070;Dbxref=Genbank:WP_005596461.1;Name=WP_005596461.1;Ontology_term=GO:0009252;gbkey=CDS;gene=uppS;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005710306.1;locus_tag=D1109_RS02070;product=polyprenyl diphosphate synthase;protein_id=WP_005596461.1;transl_table=11 NZ_CP031858.1 RefSeq gene 417165 418034 . + . ID=gene-D1109_RS02075;Name=D1109_RS02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02075;old_locus_tag=D1109_02070 NZ_CP031858.1 Protein Homology CDS 417165 418034 . + 0 ID=cds-WP_005596459.1;Parent=gene-D1109_RS02075;Dbxref=Genbank:WP_005596459.1;Name=WP_005596459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005622689.1;locus_tag=D1109_RS02075;product=phosphatidate cytidylyltransferase;protein_id=WP_005596459.1;transl_table=11 NZ_CP031858.1 RefSeq gene 418041 419354 . + . ID=gene-D1109_RS02080;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=D1109_RS02080;old_locus_tag=D1109_02075 NZ_CP031858.1 Protein Homology CDS 418041 419354 . + 0 ID=cds-WP_005596457.1;Parent=gene-D1109_RS02080;Dbxref=Genbank:WP_005596457.1;Name=WP_005596457.1;Ontology_term=GO:0006508,GO:0004222,GO:0016021;gbkey=CDS;gene=rseP;go_component=integral component of membrane|0016021||IEA;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005603714.1;locus_tag=D1109_RS02080;product=RIP metalloprotease RseP;protein_id=WP_005596457.1;transl_table=11 NZ_CP031858.1 RefSeq gene 419416 421797 . + . ID=gene-D1109_RS02085;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=D1109_RS02085;old_locus_tag=D1109_02080 NZ_CP031858.1 Protein Homology CDS 419416 421797 . + 0 ID=cds-WP_005611583.1;Parent=gene-D1109_RS02085;Dbxref=Genbank:WP_005611583.1;Name=WP_005611583.1;Ontology_term=GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600511.1;locus_tag=D1109_RS02085;product=outer membrane protein assembly factor BamA;protein_id=WP_005611583.1;transl_table=11 NZ_CP031858.1 RefSeq gene 421913 422719 . + . ID=gene-D1109_RS02090;Name=D1109_RS02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02090;old_locus_tag=D1109_02085 NZ_CP031858.1 Protein Homology CDS 421913 422719 . + 0 ID=cds-WP_237611314.1;Parent=gene-D1109_RS02090;Dbxref=Genbank:WP_237611314.1;Name=WP_237611314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005614636.1;locus_tag=D1109_RS02090;product=OmpH family outer membrane protein;protein_id=WP_237611314.1;transl_table=11 NZ_CP031858.1 RefSeq gene 422719 423744 . + . ID=gene-D1109_RS02095;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=D1109_RS02095;old_locus_tag=D1109_02090 NZ_CP031858.1 Protein Homology CDS 422719 423744 . + 0 ID=cds-WP_005611580.1;Parent=gene-D1109_RS02095;Dbxref=Genbank:WP_005611580.1;Name=WP_005611580.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005603709.1;locus_tag=D1109_RS02095;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_005611580.1;transl_table=11 NZ_CP031858.1 RefSeq gene 423813 424277 . + . ID=gene-D1109_RS02100;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=D1109_RS02100;old_locus_tag=D1109_02095 NZ_CP031858.1 Protein Homology CDS 423813 424277 . + 0 ID=cds-WP_005596447.1;Parent=gene-D1109_RS02100;Dbxref=Genbank:WP_005596447.1;Name=WP_005596447.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010945087.1;locus_tag=D1109_RS02100;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_005596447.1;transl_table=11 NZ_CP031858.1 RefSeq gene 424305 425099 . + . ID=gene-D1109_RS02105;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=D1109_RS02105;old_locus_tag=D1109_02100 NZ_CP031858.1 Protein Homology CDS 424305 425099 . + 0 ID=cds-WP_009875150.1;Parent=gene-D1109_RS02105;Dbxref=Genbank:WP_009875150.1;Name=WP_009875150.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651705.1;locus_tag=D1109_RS02105;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_009875150.1;transl_table=11 NZ_CP031858.1 RefSeq gene 425159 426349 . - . ID=gene-D1109_RS02110;Name=ispC;gbkey=Gene;gene=ispC;gene_biotype=protein_coding;locus_tag=D1109_RS02110;old_locus_tag=D1109_02105 NZ_CP031858.1 Protein Homology CDS 425159 426349 . - 0 ID=cds-WP_012262810.1;Parent=gene-D1109_RS02110;Dbxref=Genbank:WP_012262810.1;Name=WP_012262810.1;Ontology_term=GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;gene=ispC;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005620038.1;locus_tag=D1109_RS02110;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_012262810.1;transl_table=11 NZ_CP031858.1 RefSeq gene 426423 428630 . - . ID=gene-D1109_RS02115;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=D1109_RS02115;old_locus_tag=D1109_02110 NZ_CP031858.1 Protein Homology CDS 426423 428630 . - 0 ID=cds-WP_005600509.1;Parent=gene-D1109_RS02115;Dbxref=Genbank:WP_005600509.1;Name=WP_005600509.1;Ontology_term=GO:0015969;gbkey=CDS;gene=relA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005607154.1;locus_tag=D1109_RS02115;product=GTP diphosphokinase;protein_id=WP_005600509.1;transl_table=11 NZ_CP031858.1 RefSeq gene 428908 430218 . + . ID=gene-D1109_RS02120;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=D1109_RS02120;old_locus_tag=D1109_02115 NZ_CP031858.1 Protein Homology CDS 428908 430218 . + 0 ID=cds-WP_237611315.1;Parent=gene-D1109_RS02120;Dbxref=Genbank:WP_237611315.1;Name=WP_237611315.1;Ontology_term=GO:0006779,GO:0008883;gbkey=CDS;gene=hemA;go_function=glutamyl-tRNA reductase activity|0008883||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875152.1;locus_tag=D1109_RS02120;product=glutamyl-tRNA reductase;protein_id=WP_237611315.1;transl_table=11 NZ_CP031858.1 RefSeq gene 430376 431896 . + . ID=gene-D1109_RS02125;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=D1109_RS02125;old_locus_tag=D1109_02120 NZ_CP031858.1 Protein Homology CDS 430376 431896 . + 0 ID=cds-WP_215577702.1;Parent=gene-D1109_RS02125;Dbxref=Genbank:WP_215577702.1;Name=WP_215577702.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022;gbkey=CDS;gene=der;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005614634.1;locus_tag=D1109_RS02125;product=ribosome biogenesis GTPase Der;protein_id=WP_215577702.1;transl_table=11 NZ_CP031858.1 RefSeq gene 432010 433440 . + . ID=gene-D1109_RS02130;Name=hldE;gbkey=Gene;gene=hldE;gene_biotype=protein_coding;locus_tag=D1109_RS02130;old_locus_tag=D1109_02125 NZ_CP031858.1 Protein Homology CDS 432010 433440 . + 0 ID=cds-WP_237611316.1;Parent=gene-D1109_RS02130;Dbxref=Genbank:WP_237611316.1;Name=WP_237611316.1;Ontology_term=GO:0005975,GO:0009058,GO:0016779;gbkey=CDS;gene=hldE;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=carbohydrate metabolic process|0005975||IEA,biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651822.1;locus_tag=D1109_RS02130;product=bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE;protein_id=WP_237611316.1;transl_table=11 NZ_CP031858.1 RefSeq gene 433456 433995 . + . ID=gene-D1109_RS02135;Name=pyrR;gbkey=Gene;gene=pyrR;gene_biotype=protein_coding;locus_tag=D1109_RS02135;old_locus_tag=D1109_02130 NZ_CP031858.1 Protein Homology CDS 433456 433995 . + 0 ID=cds-WP_005600504.1;Parent=gene-D1109_RS02135;Dbxref=Genbank:WP_005600504.1;Name=WP_005600504.1;Ontology_term=GO:0009116;gbkey=CDS;gene=pyrR;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600504.1;locus_tag=D1109_RS02135;product=bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;protein_id=WP_005600504.1;transl_table=11 NZ_CP031858.1 RefSeq gene 434076 435026 . + . ID=gene-D1109_RS02140;Name=D1109_RS02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02140;old_locus_tag=D1109_02135 NZ_CP031858.1 Protein Homology CDS 434076 435026 . + 0 ID=cds-WP_005600503.1;Parent=gene-D1109_RS02140;Dbxref=Genbank:WP_005600503.1;Name=WP_005600503.1;Ontology_term=GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012262807.1;locus_tag=D1109_RS02140;product=peptidylprolyl isomerase;protein_id=WP_005600503.1;transl_table=11 NZ_CP031858.1 RefSeq gene 435092 435961 . + . ID=gene-D1109_RS02145;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=D1109_RS02145;old_locus_tag=D1109_02140 NZ_CP031858.1 Protein Homology CDS 435092 435961 . + 0 ID=cds-WP_012262806.1;Parent=gene-D1109_RS02145;Dbxref=Genbank:WP_012262806.1;Name=WP_012262806.1;Ontology_term=GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596422.1;locus_tag=D1109_RS02145;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_012262806.1;transl_table=11 NZ_CP031858.1 RefSeq gene 436068 436694 . - . ID=gene-D1109_RS02150;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=D1109_RS02150;old_locus_tag=D1109_02145 NZ_CP031858.1 Protein Homology CDS 436068 436694 . - 0 ID=cds-WP_005596420.1;Parent=gene-D1109_RS02150;Dbxref=Genbank:WP_005596420.1;Name=WP_005596420.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295473.1;locus_tag=D1109_RS02150;product=uracil phosphoribosyltransferase;protein_id=WP_005596420.1;transl_table=11 NZ_CP031858.1 RefSeq gene 436761 438449 . - . ID=gene-D1109_RS02155;Name=fadD;gbkey=Gene;gene=fadD;gene_biotype=protein_coding;locus_tag=D1109_RS02155;old_locus_tag=D1109_02150 NZ_CP031858.1 Protein Homology CDS 436761 438449 . - 0 ID=cds-WP_237611317.1;Parent=gene-D1109_RS02155;Dbxref=Genbank:WP_237611317.1;Name=WP_237611317.1;gbkey=CDS;gene=fadD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005607147.1;locus_tag=D1109_RS02155;product=long-chain-fatty-acid--CoA ligase FadD;protein_id=WP_237611317.1;transl_table=11 NZ_CP031858.1 RefSeq gene 438461 438889 . - . ID=gene-D1109_RS02160;Name=D1109_RS02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02160;old_locus_tag=D1109_02155 NZ_CP031858.1 Protein Homology CDS 438461 438889 . - 0 ID=cds-WP_005596416.1;Parent=gene-D1109_RS02160;Dbxref=Genbank:WP_005596416.1;Name=WP_005596416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005611567.1;locus_tag=D1109_RS02160;product=SoxR reducing system RseC family protein;protein_id=WP_005596416.1;transl_table=11 NZ_CP031858.1 RefSeq gene 439114 439737 . - . ID=gene-D1109_RS02165;Name=D1109_RS02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02165;old_locus_tag=D1109_02160 NZ_CP031858.1 Protein Homology CDS 439114 439737 . - 0 ID=cds-WP_237611318.1;Parent=gene-D1109_RS02165;Dbxref=Genbank:WP_237611318.1;Name=WP_237611318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005603692.1;locus_tag=D1109_RS02165;product=RseA family anti-sigma factor;protein_id=WP_237611318.1;transl_table=11 NZ_CP031858.1 RefSeq gene 439757 440335 . - . ID=gene-D1109_RS02170;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=D1109_RS02170;old_locus_tag=D1109_02165 NZ_CP031858.1 Protein Homology CDS 439757 440335 . - 0 ID=cds-WP_005596412.1;Parent=gene-D1109_RS02170;Dbxref=Genbank:WP_005596412.1;Name=WP_005596412.1;Ontology_term=GO:0006352,GO:0006979,GO:0016987;gbkey=CDS;gene=rpoE;go_function=sigma factor activity|0016987||IEA;go_process=DNA-templated transcription%2C initiation|0006352||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596412.1;locus_tag=D1109_RS02170;product=RNA polymerase sigma factor RpoE;protein_id=WP_005596412.1;transl_table=11 NZ_CP031858.1 RefSeq gene 440678 442219 . - . ID=gene-D1109_RS02175;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=D1109_RS02175;old_locus_tag=D1109_02170 NZ_CP031858.1 Protein Homology CDS 440678 442219 . - 0 ID=cds-WP_237611319.1;Parent=gene-D1109_RS02175;Dbxref=Genbank:WP_237611319.1;Name=WP_237611319.1;Ontology_term=GO:0019752,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875154.1;locus_tag=D1109_RS02175;product=2-isopropylmalate synthase;protein_id=WP_237611319.1;transl_table=11 NZ_CP031858.1 RefSeq gene 442816 443631 . + . ID=gene-D1109_RS02180;Name=D1109_RS02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02180;old_locus_tag=D1109_02175 NZ_CP031858.1 Protein Homology CDS 442816 443631 . + 0 ID=cds-WP_005600497.1;Parent=gene-D1109_RS02180;Dbxref=Genbank:WP_005600497.1;Name=WP_005600497.1;Ontology_term=GO:0008152;gbkey=CDS;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600497.1;locus_tag=D1109_RS02180;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_005600497.1;transl_table=11 NZ_CP031858.1 RefSeq gene 443728 444909 . + . ID=gene-D1109_RS02185;Name=D1109_RS02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02185;old_locus_tag=D1109_02180 NZ_CP031858.1 Protein Homology CDS 443728 444909 . + 0 ID=cds-WP_005600496.1;Parent=gene-D1109_RS02185;Dbxref=Genbank:WP_005600496.1;Name=WP_005600496.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596405.1;locus_tag=D1109_RS02185;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_005600496.1;transl_table=11 NZ_CP031858.1 RefSeq gene 444989 445927 . - . ID=gene-D1109_RS02190;Name=D1109_RS02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02190;old_locus_tag=D1109_02185 NZ_CP031858.1 Protein Homology CDS 444989 445927 . - 0 ID=cds-WP_005596403.1;Parent=gene-D1109_RS02190;Dbxref=Genbank:WP_005596403.1;Name=WP_005596403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596403.1;locus_tag=D1109_RS02190;product=bile acid:sodium symporter family protein;protein_id=WP_005596403.1;transl_table=11 NZ_CP031858.1 RefSeq gene 446100 446915 . + . ID=gene-D1109_RS02195;Name=D1109_RS02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02195;old_locus_tag=D1109_02190 NZ_CP031858.1 Protein Homology CDS 446100 446915 . + 0 ID=cds-WP_005596401.1;Parent=gene-D1109_RS02195;Dbxref=Genbank:WP_005596401.1;Name=WP_005596401.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010869033.1;locus_tag=D1109_RS02195;product=5'-nucleotidase%2C lipoprotein e(P4) family;protein_id=WP_005596401.1;transl_table=11 NZ_CP031858.1 RefSeq gene 447039 448322 . + . ID=gene-D1109_RS02200;Name=pepB;gbkey=Gene;gene=pepB;gene_biotype=protein_coding;locus_tag=D1109_RS02200;old_locus_tag=D1109_02195 NZ_CP031858.1 Protein Homology CDS 447039 448322 . + 0 ID=cds-WP_237611490.1;Parent=gene-D1109_RS02200;Dbxref=Genbank:WP_237611490.1;Name=WP_237611490.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepB;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596399.1;locus_tag=D1109_RS02200;product=aminopeptidase PepB;protein_id=WP_237611490.1;transl_table=11 NZ_CP031858.1 RefSeq gene 448450 449385 . + . ID=gene-D1109_RS02205;Name=D1109_RS02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02205;old_locus_tag=D1109_02200 NZ_CP031858.1 Protein Homology CDS 448450 449385 . + 0 ID=cds-WP_005596397.1;Parent=gene-D1109_RS02205;Dbxref=Genbank:WP_005596397.1;Name=WP_005596397.1;Ontology_term=GO:0005975,GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596397.1;locus_tag=D1109_RS02205;product=KpsF/GutQ family sugar-phosphate isomerase;protein_id=WP_005596397.1;transl_table=11 NZ_CP031858.1 RefSeq gene 449395 449883 . + . ID=gene-D1109_RS02210;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=D1109_RS02210;old_locus_tag=D1109_02205 NZ_CP031858.1 Protein Homology CDS 449395 449883 . + 0 ID=cds-WP_005596395.1;Parent=gene-D1109_RS02210;Dbxref=Genbank:WP_005596395.1;Name=WP_005596395.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greB;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription%2C elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651838.1;locus_tag=D1109_RS02210;product=transcription elongation factor GreB;protein_id=WP_005596395.1;transl_table=11 NZ_CP031858.1 RefSeq gene 449972 450433 . - . ID=gene-D1109_RS02215;Name=ribE;gbkey=Gene;gene=ribE;gene_biotype=protein_coding;locus_tag=D1109_RS02215;old_locus_tag=D1109_02210 NZ_CP031858.1 Protein Homology CDS 449972 450433 . - 0 ID=cds-WP_005600491.1;Parent=gene-D1109_RS02215;Dbxref=Genbank:WP_005600491.1;Name=WP_005600491.1;Ontology_term=GO:0009231,GO:0000906,GO:0009349;gbkey=CDS;gene=ribE;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;go_process=riboflavin biosynthetic process|0009231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010945068.1;locus_tag=D1109_RS02215;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_005600491.1;transl_table=11 NZ_CP031858.1 RefSeq gene 450544 451749 . - . ID=gene-D1109_RS02220;Name=D1109_RS02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02220;old_locus_tag=D1109_02215 NZ_CP031858.1 Protein Homology CDS 450544 451749 . - 0 ID=cds-WP_237611320.1;Parent=gene-D1109_RS02220;Dbxref=Genbank:WP_237611320.1;Name=WP_237611320.1;Ontology_term=GO:0009231,GO:0003935,GO:0008686;gbkey=CDS;go_function=GTP cyclohydrolase II activity|0003935||IEA,3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;go_process=riboflavin biosynthetic process|0009231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005614630.1;locus_tag=D1109_RS02220;product=bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II;protein_id=WP_237611320.1;transl_table=11 NZ_CP031858.1 RefSeq gene 451810 452457 . - . ID=gene-D1109_RS02225;Name=ribE;gbkey=Gene;gene=ribE;gene_biotype=protein_coding;locus_tag=D1109_RS02225;old_locus_tag=D1109_02220 NZ_CP031858.1 Protein Homology CDS 451810 452457 . - 0 ID=cds-WP_005596391.1;Parent=gene-D1109_RS02225;Dbxref=Genbank:WP_005596391.1;Name=WP_005596391.1;Ontology_term=GO:0009231,GO:0004746;gbkey=CDS;gene=ribE;go_function=riboflavin synthase activity|0004746||IEA;go_process=riboflavin biosynthetic process|0009231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991741.1;locus_tag=D1109_RS02225;product=riboflavin synthase;protein_id=WP_005596391.1;transl_table=11 NZ_CP031858.1 RefSeq gene 452580 453674 . - . ID=gene-D1109_RS02230;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=D1109_RS02230;old_locus_tag=D1109_02225 NZ_CP031858.1 Protein Homology CDS 452580 453674 . - 0 ID=cds-WP_237611321.1;Parent=gene-D1109_RS02230;Dbxref=Genbank:WP_237611321.1;Name=WP_237611321.1;Ontology_term=GO:0009231,GO:0008703,GO:0008835;gbkey=CDS;gene=ribD;go_function=5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA;go_process=riboflavin biosynthetic process|0009231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600488.1;locus_tag=D1109_RS02230;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_237611321.1;transl_table=11 NZ_CP031858.1 cmsearch riboswitch 453807 453932 . - . ID=id-NZ_CP031858.1:453807..453932;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP031858.1 RefSeq gene 453984 455258 . - . ID=gene-D1109_RS02235;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=D1109_RS02235;old_locus_tag=D1109_02230 NZ_CP031858.1 Protein Homology CDS 453984 455258 . - 0 ID=cds-WP_005600487.1;Parent=gene-D1109_RS02235;Dbxref=Genbank:WP_005600487.1;Name=WP_005600487.1;Ontology_term=GO:0006071,GO:0004368,GO:0051536,GO:0009331;gbkey=CDS;gene=glpC;go_component=glycerol-3-phosphate dehydrogenase complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600487.1;locus_tag=D1109_RS02235;product=anaerobic glycerol-3-phosphate dehydrogenase subunit C;protein_id=WP_005600487.1;transl_table=11 NZ_CP031858.1 RefSeq gene 455255 456541 . - . ID=gene-D1109_RS02240;Name=glpB;gbkey=Gene;gene=glpB;gene_biotype=protein_coding;locus_tag=D1109_RS02240;old_locus_tag=D1109_02235 NZ_CP031858.1 Protein Homology CDS 455255 456541 . - 0 ID=cds-WP_237611322.1;Parent=gene-D1109_RS02240;Dbxref=Genbank:WP_237611322.1;Name=WP_237611322.1;gbkey=CDS;gene=glpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005607131.1;locus_tag=D1109_RS02240;product=glycerol-3-phosphate dehydrogenase subunit GlpB;protein_id=WP_237611322.1;transl_table=11 NZ_CP031858.1 RefSeq gene 456531 458216 . - . ID=gene-D1109_RS02245;Name=glpA;gbkey=Gene;gene=glpA;gene_biotype=protein_coding;locus_tag=D1109_RS02245;old_locus_tag=D1109_02240 NZ_CP031858.1 Protein Homology CDS 456531 458216 . - 0 ID=cds-WP_011848363.1;Parent=gene-D1109_RS02245;Dbxref=Genbank:WP_011848363.1;Name=WP_011848363.1;Ontology_term=GO:0006072,GO:0046174,GO:0004368,GO:0010181,GO:0050660,GO:0009331;gbkey=CDS;gene=glpA;go_component=glycerol-3-phosphate dehydrogenase complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA,polyol catabolic process|0046174||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991745.1;locus_tag=D1109_RS02245;product=anaerobic glycerol-3-phosphate dehydrogenase subunit A;protein_id=WP_011848363.1;transl_table=11 NZ_CP031858.1 RefSeq gene 458468 459556 . + . ID=gene-D1109_RS02250;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;locus_tag=D1109_RS02250;old_locus_tag=D1109_02245 NZ_CP031858.1 Protein Homology CDS 458468 459556 . + 0 ID=cds-WP_005596381.1;Parent=gene-D1109_RS02250;Dbxref=Genbank:WP_005596381.1;Name=WP_005596381.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=glpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005614625.1;locus_tag=D1109_RS02250;product=glycerophosphodiester phosphodiesterase;protein_id=WP_005596381.1;transl_table=11 NZ_CP031858.1 RefSeq gene 459759 461204 . + . ID=gene-D1109_RS02255;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=D1109_RS02255;old_locus_tag=D1109_02250 NZ_CP031858.1 Protein Homology CDS 459759 461204 . + 0 ID=cds-WP_237611323.1;Parent=gene-D1109_RS02255;Dbxref=Genbank:WP_237611323.1;Name=WP_237611323.1;Ontology_term=GO:0015794,GO:0015169;gbkey=CDS;gene=glpT;go_function=glycerol-3-phosphate transmembrane transporter activity|0015169||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596379.1;locus_tag=D1109_RS02255;product=glycerol-3-phosphate transporter;protein_id=WP_237611323.1;transl_table=11 NZ_CP031858.1 RefSeq gene 461350 463758 . + . ID=gene-D1109_RS02260;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=D1109_RS02260;old_locus_tag=D1109_02255 NZ_CP031858.1 Protein Homology CDS 461350 463758 . + 0 ID=cds-WP_005600483.1;Parent=gene-D1109_RS02260;Dbxref=Genbank:WP_005600483.1;Name=WP_005600483.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0016887,GO:0043565;gbkey=CDS;gene=lon;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA,sequence-specific DNA binding|0043565||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005623665.1;locus_tag=D1109_RS02260;product=endopeptidase La;protein_id=WP_005600483.1;transl_table=11 NZ_CP031858.1 RefSeq gene 463879 465390 . - . ID=gene-D1109_RS02265;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=D1109_RS02265;old_locus_tag=D1109_02260 NZ_CP031858.1 Protein Homology CDS 463879 465390 . - 0 ID=cds-WP_005619017.1;Parent=gene-D1109_RS02265;Dbxref=Genbank:WP_005619017.1;Name=WP_005619017.1;Ontology_term=GO:0006071,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596375.1;locus_tag=D1109_RS02265;product=glycerol kinase GlpK;protein_id=WP_005619017.1;transl_table=11 NZ_CP031858.1 RefSeq gene 465425 466207 . - . ID=gene-D1109_RS02270;Name=D1109_RS02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02270;old_locus_tag=D1109_02265 NZ_CP031858.1 Protein Homology CDS 465425 466207 . - 0 ID=cds-WP_237611324.1;Parent=gene-D1109_RS02270;Dbxref=Genbank:WP_237611324.1;Name=WP_237611324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600478.1;locus_tag=D1109_RS02270;product=aquaporin;protein_id=WP_237611324.1;transl_table=11 NZ_CP031858.1 RefSeq gene 466443 467045 . - . ID=gene-D1109_RS02275;Name=D1109_RS02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02275;old_locus_tag=D1109_02270 NZ_CP031858.1 Protein Homology CDS 466443 467045 . - 0 ID=cds-WP_005600477.1;Parent=gene-D1109_RS02275;Dbxref=Genbank:WP_005600477.1;Name=WP_005600477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651708.1;locus_tag=D1109_RS02275;product=DUF2057 domain-containing protein;protein_id=WP_005600477.1;transl_table=11 NZ_CP031858.1 RefSeq gene 467215 468108 . + . ID=gene-D1109_RS02280;Name=corC;gbkey=Gene;gene=corC;gene_biotype=protein_coding;locus_tag=D1109_RS02280;old_locus_tag=D1109_02275 NZ_CP031858.1 Protein Homology CDS 467215 468108 . + 0 ID=cds-WP_005603650.1;Parent=gene-D1109_RS02280;Dbxref=Genbank:WP_005603650.1;Name=WP_005603650.1;Note=CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter (CNNM) family%2C and was characterized as belonging to a set of three proteins%2C at least one of which must be present for CorA to function.;Ontology_term=GO:0050660;gbkey=CDS;gene=corC;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005614621.1;locus_tag=D1109_RS02280;product=CNNM family magnesium/cobalt transport protein CorC;protein_id=WP_005603650.1;transl_table=11 NZ_CP031858.1 RefSeq gene 468190 469701 . + . ID=gene-D1109_RS02285;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=D1109_RS02285;old_locus_tag=D1109_02280 NZ_CP031858.1 Protein Homology CDS 468190 469701 . + 0 ID=cds-WP_005611523.1;Parent=gene-D1109_RS02285;Dbxref=Genbank:WP_005611523.1;Name=WP_005611523.1;Ontology_term=GO:0006497,GO:0042158,GO:0016410,GO:0016021;gbkey=CDS;gene=lnt;go_component=integral component of membrane|0016021||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=protein lipidation|0006497||IEA,lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005611523.1;locus_tag=D1109_RS02285;product=apolipoprotein N-acyltransferase;protein_id=WP_005611523.1;transl_table=11 NZ_CP031858.1 RefSeq gene 469779 473387 . - . ID=gene-D1109_RS02290;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=D1109_RS02290;old_locus_tag=D1109_02285 NZ_CP031858.1 Protein Homology CDS 469779 473387 . - 0 ID=cds-WP_237611325.1;Parent=gene-D1109_RS02290;Dbxref=Genbank:WP_237611325.1;Name=WP_237611325.1;Ontology_term=GO:0006281,GO:0006310,GO:0008854,GO:0009338;gbkey=CDS;gene=recB;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012262797.1;locus_tag=D1109_RS02290;product=exodeoxyribonuclease V subunit beta;protein_id=WP_237611325.1;transl_table=11 NZ_CP031858.1 RefSeq gene 473403 474794 . - . ID=gene-D1109_RS02295;Name=D1109_RS02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02295;old_locus_tag=D1109_02290 NZ_CP031858.1 Protein Homology CDS 473403 474794 . - 0 ID=cds-WP_005596366.1;Parent=gene-D1109_RS02295;Dbxref=Genbank:WP_005596366.1;Name=WP_005596366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651718.1;locus_tag=D1109_RS02295;product=MATE family efflux transporter;protein_id=WP_005596366.1;transl_table=11 NZ_CP031858.1 RefSeq gene 474938 476020 . - . ID=gene-D1109_RS02300;Name=D1109_RS02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02300;old_locus_tag=D1109_02295 NZ_CP031858.1 Protein Homology CDS 474938 476020 . - 0 ID=cds-WP_005596365.1;Parent=gene-D1109_RS02300;Dbxref=Genbank:WP_005596365.1;Name=WP_005596365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651719.1;locus_tag=D1109_RS02300;product=extracellular solute-binding protein;protein_id=WP_005596365.1;transl_table=11 NZ_CP031858.1 RefSeq gene 476265 476861 . + . ID=gene-D1109_RS02305;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=D1109_RS02305;old_locus_tag=D1109_02300 NZ_CP031858.1 Protein Homology CDS 476265 476861 . + 0 ID=cds-WP_005603646.1;Parent=gene-D1109_RS02305;Dbxref=Genbank:WP_005603646.1;Name=WP_005603646.1;Ontology_term=GO:0006457,GO:0000774,GO:0042803,GO:0051087;gbkey=CDS;gene=grpE;go_function=adenyl-nucleotide exchange factor activity|0000774||IEA,protein homodimerization activity|0042803||IEA,chaperone binding|0051087||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991246.1;locus_tag=D1109_RS02305;product=nucleotide exchange factor GrpE;protein_id=WP_005603646.1;transl_table=11 NZ_CP031858.1 RefSeq gene 477058 477510 . + . ID=gene-D1109_RS02310;Name=D1109_RS02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02310;old_locus_tag=D1109_02305 NZ_CP031858.1 Protein Homology CDS 477058 477510 . + 0 ID=cds-WP_005600468.1;Parent=gene-D1109_RS02310;Dbxref=Genbank:WP_005600468.1;Name=WP_005600468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011609147.1;locus_tag=D1109_RS02310;product=DUF441 domain-containing protein;protein_id=WP_005600468.1;transl_table=11 NZ_CP031858.1 RefSeq gene 477646 481545 . + . ID=gene-D1109_RS02315;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=D1109_RS02315;old_locus_tag=D1109_02310 NZ_CP031858.1 Protein Homology CDS 477646 481545 . + 0 ID=cds-WP_237611326.1;Parent=gene-D1109_RS02315;Dbxref=Genbank:WP_237611326.1;Name=WP_237611326.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=hrpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005614608.1;locus_tag=D1109_RS02315;product=ATP-dependent RNA helicase HrpA;protein_id=WP_237611326.1;transl_table=11 NZ_CP031858.1 RefSeq gene 481766 484564 . + . ID=gene-D1109_RS02320;Name=D1109_RS02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02320;old_locus_tag=D1109_02315 NZ_CP031858.1 Protein Homology CDS 481766 484564 . + 0 ID=cds-WP_005619015.1;Parent=gene-D1109_RS02320;Dbxref=Genbank:WP_005619015.1;Name=WP_005619015.1;Ontology_term=GO:0006508;gbkey=CDS;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005619015.1;locus_tag=D1109_RS02320;product=S8 family serine peptidase;protein_id=WP_005619015.1;transl_table=11 NZ_CP031858.1 RefSeq gene 484659 485531 . + . ID=gene-D1109_RS02325;Name=D1109_RS02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02325;old_locus_tag=D1109_02320 NZ_CP031858.1 Protein Homology CDS 484659 485531 . + 0 ID=cds-WP_005596360.1;Parent=gene-D1109_RS02325;Dbxref=Genbank:WP_005596360.1;Name=WP_005596360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596360.1;locus_tag=D1109_RS02325;product=VirK/YbjX family protein;protein_id=WP_005596360.1;transl_table=11 NZ_CP031858.1 RefSeq gene 485629 486306 . - . ID=gene-D1109_RS02330;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=D1109_RS02330;old_locus_tag=D1109_02325 NZ_CP031858.1 Protein Homology CDS 485629 486306 . - 0 ID=cds-WP_005596359.1;Parent=gene-D1109_RS02330;Dbxref=Genbank:WP_005596359.1;Name=WP_005596359.1;Ontology_term=GO:0006284,GO:0004844,GO:0016799;gbkey=CDS;gene=ung;go_function=uracil DNA N-glycosylase activity|0004844||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596359.1;locus_tag=D1109_RS02330;product=uracil-DNA glycosylase;protein_id=WP_005596359.1;transl_table=11 NZ_CP031858.1 RefSeq gene 486512 486898 . + . ID=gene-D1109_RS02335;Name=grcA;gbkey=Gene;gene=grcA;gene_biotype=protein_coding;locus_tag=D1109_RS02335;old_locus_tag=D1109_02330 NZ_CP031858.1 Protein Homology CDS 486512 486898 . + 0 ID=cds-WP_005596358.1;Parent=gene-D1109_RS02335;Dbxref=Genbank:WP_005596358.1;Name=WP_005596358.1;gbkey=CDS;gene=grcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007728348.1;locus_tag=D1109_RS02335;product=autonomous glycyl radical cofactor GrcA;protein_id=WP_005596358.1;transl_table=11 NZ_CP031858.1 RefSeq gene 487124 487579 . + . ID=gene-D1109_RS02340;Name=D1109_RS02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02340;old_locus_tag=D1109_02335 NZ_CP031858.1 Protein Homology CDS 487124 487579 . + 0 ID=cds-WP_237611327.1;Parent=gene-D1109_RS02340;Dbxref=Genbank:WP_237611327.1;Name=WP_237611327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596354.1;locus_tag=D1109_RS02340;product=transcriptional regulator;protein_id=WP_237611327.1;transl_table=11 NZ_CP031858.1 RefSeq gene 487628 488224 . - . ID=gene-D1109_RS02345;Name=D1109_RS02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02345;old_locus_tag=D1109_02340 NZ_CP031858.1 Protein Homology CDS 487628 488224 . - 0 ID=cds-WP_005603638.1;Parent=gene-D1109_RS02345;Dbxref=Genbank:WP_005603638.1;Name=WP_005603638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005607110.1;locus_tag=D1109_RS02345;product=NlpC/P60 family protein;protein_id=WP_005603638.1;transl_table=11 NZ_CP031858.1 RefSeq gene 488345 489187 . - . ID=gene-D1109_RS02350;Name=nfo;gbkey=Gene;gene=nfo;gene_biotype=protein_coding;locus_tag=D1109_RS02350;old_locus_tag=D1109_02345 NZ_CP031858.1 Protein Homology CDS 488345 489187 . - 0 ID=cds-WP_237611328.1;Parent=gene-D1109_RS02350;Dbxref=Genbank:WP_237611328.1;Name=WP_237611328.1;Ontology_term=GO:0006281,GO:0003677;gbkey=CDS;gene=nfo;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651728.1;locus_tag=D1109_RS02350;product=deoxyribonuclease IV;protein_id=WP_237611328.1;transl_table=11 NZ_CP031858.1 RefSeq gene 489245 489814 . + . ID=gene-D1109_RS02355;Name=D1109_RS02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02355;old_locus_tag=D1109_02350 NZ_CP031858.1 Protein Homology CDS 489245 489814 . + 0 ID=cds-WP_005600457.1;Parent=gene-D1109_RS02355;Dbxref=Genbank:WP_005600457.1;Name=WP_005600457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600457.1;locus_tag=D1109_RS02355;product=molecular chaperone;protein_id=WP_005600457.1;transl_table=11 NZ_CP031858.1 RefSeq gene 489885 490271 . + . ID=gene-D1109_RS02360;Name=D1109_RS02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02360;old_locus_tag=D1109_02355 NZ_CP031858.1 Protein Homology CDS 489885 490271 . + 0 ID=cds-WP_005600456.1;Parent=gene-D1109_RS02360;Dbxref=Genbank:WP_005600456.1;Name=WP_005600456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600456.1;locus_tag=D1109_RS02360;product=hypothetical protein;protein_id=WP_005600456.1;transl_table=11 NZ_CP031858.1 RefSeq pseudogene 490317 491513 . - . ID=gene-D1109_RS02365;Name=D1109_RS02365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D1109_RS02365;old_locus_tag=D1109_02360;pseudo=true NZ_CP031858.1 Protein Homology CDS 490317 491513 . - 0 ID=cds-D1109_RS02365;Parent=gene-D1109_RS02365;Note=internal stop;Ontology_term=GO:0042908,GO:1990961,GO:0042910,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transport|0042908||IEA,xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005611509.1;locus_tag=D1109_RS02365;product=Bcr/CflA family multidrug efflux MFS transporter;pseudo=true;transl_table=11 NZ_CP031858.1 RefSeq gene 491513 492205 . - . ID=gene-D1109_RS02370;Name=rsuA;gbkey=Gene;gene=rsuA;gene_biotype=protein_coding;locus_tag=D1109_RS02370;old_locus_tag=D1109_02365 NZ_CP031858.1 Protein Homology CDS 491513 492205 . - 0 ID=cds-WP_005600454.1;Parent=gene-D1109_RS02370;Dbxref=Genbank:WP_005600454.1;Name=WP_005600454.1;gbkey=CDS;gene=rsuA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005607107.1;locus_tag=D1109_RS02370;product=16S rRNA pseudouridine(516) synthase RsuA;protein_id=WP_005600454.1;transl_table=11 NZ_CP031858.1 RefSeq gene 492322 492483 . + . ID=gene-D1109_RS02375;Name=D1109_RS02375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02375;old_locus_tag=D1109_02370 NZ_CP031858.1 Protein Homology CDS 492322 492483 . + 0 ID=cds-WP_005596340.1;Parent=gene-D1109_RS02375;Dbxref=Genbank:WP_005596340.1;Name=WP_005596340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874647.1;locus_tag=D1109_RS02375;product=DUF1232 domain-containing protein;protein_id=WP_005596340.1;transl_table=11 NZ_CP031858.1 RefSeq gene 492519 493529 . - . ID=gene-D1109_RS02380;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=D1109_RS02380;old_locus_tag=D1109_02375 NZ_CP031858.1 Protein Homology CDS 492519 493529 . - 0 ID=cds-WP_237611329.1;Parent=gene-D1109_RS02380;Dbxref=Genbank:WP_237611329.1;Name=WP_237611329.1;Ontology_term=GO:0009234,GO:0000287,GO:0016836;gbkey=CDS;gene=menC;go_function=magnesium ion binding|0000287||IEA,hydro-lyase activity|0016836||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596339.1;locus_tag=D1109_RS02380;product=o-succinylbenzoate synthase;protein_id=WP_237611329.1;transl_table=11 NZ_CP031858.1 RefSeq gene 493648 495687 . + . ID=gene-D1109_RS02385;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=D1109_RS02385;old_locus_tag=D1109_02380 NZ_CP031858.1 Protein Homology CDS 493648 495687 . + 0 ID=cds-WP_237611330.1;Parent=gene-D1109_RS02385;Dbxref=Genbank:WP_237611330.1;Name=WP_237611330.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005620020.1;locus_tag=D1109_RS02385;product=methionine--tRNA ligase;protein_id=WP_237611330.1;transl_table=11 NZ_CP031858.1 RefSeq gene 495746 496162 . + . ID=gene-D1109_RS02390;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=D1109_RS02390;old_locus_tag=D1109_02385 NZ_CP031858.1 Protein Homology CDS 495746 496162 . + 0 ID=cds-WP_005600451.1;Parent=gene-D1109_RS02390;Dbxref=Genbank:WP_005600451.1;Name=WP_005600451.1;Ontology_term=GO:0006165,GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;go_process=nucleoside diphosphate phosphorylation|0006165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596335.1;locus_tag=D1109_RS02390;product=nucleoside-diphosphate kinase;protein_id=WP_005600451.1;transl_table=11 NZ_CP031858.1 RefSeq gene 496274 498778 . - . ID=gene-D1109_RS02395;Name=D1109_RS02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02395;old_locus_tag=D1109_02390 NZ_CP031858.1 Protein Homology CDS 496274 498778 . - 0 ID=cds-WP_005600450.1;Parent=gene-D1109_RS02395;Dbxref=Genbank:WP_005600450.1;Name=WP_005600450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005616807.1;locus_tag=D1109_RS02395;product=glycogen/starch/alpha-glucan phosphorylase;protein_id=WP_005600450.1;transl_table=11 NZ_CP031858.1 RefSeq gene 498808 500244 . - . ID=gene-D1109_RS02400;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=D1109_RS02400;old_locus_tag=D1109_02395 NZ_CP031858.1 Protein Homology CDS 498808 500244 . - 0 ID=cds-WP_237611331.1;Parent=gene-D1109_RS02400;Dbxref=Genbank:WP_237611331.1;Name=WP_237611331.1;Ontology_term=GO:0004373;gbkey=CDS;gene=glgA;go_function=glycogen (starch) synthase activity|0004373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017357702.1;locus_tag=D1109_RS02400;product=glycogen synthase GlgA;protein_id=WP_237611331.1;transl_table=11 NZ_CP031858.1 RefSeq gene 500347 501663 . - . ID=gene-D1109_RS02405;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=D1109_RS02405;old_locus_tag=D1109_02400 NZ_CP031858.1 Protein Homology CDS 500347 501663 . - 0 ID=cds-WP_005596318.1;Parent=gene-D1109_RS02405;Dbxref=Genbank:WP_005596318.1;Name=WP_005596318.1;Ontology_term=GO:0005978,GO:0008878;gbkey=CDS;gene=glgC;go_function=glucose-1-phosphate adenylyltransferase activity|0008878||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596318.1;locus_tag=D1109_RS02405;product=glucose-1-phosphate adenylyltransferase;protein_id=WP_005596318.1;transl_table=11 NZ_CP031858.1 RefSeq gene 501679 503664 . - . ID=gene-D1109_RS02410;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=D1109_RS02410;old_locus_tag=D1109_02405 NZ_CP031858.1 Protein Homology CDS 501679 503664 . - 0 ID=cds-WP_237611332.1;Parent=gene-D1109_RS02410;Dbxref=Genbank:WP_237611332.1;Name=WP_237611332.1;Ontology_term=GO:0005980,GO:0004133;gbkey=CDS;gene=glgX;go_function=glycogen debranching enzyme activity|0004133||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005607102.1;locus_tag=D1109_RS02410;product=glycogen debranching protein GlgX;protein_id=WP_237611332.1;transl_table=11 NZ_CP031858.1 RefSeq gene 503671 506004 . - . ID=gene-D1109_RS02415;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=D1109_RS02415;old_locus_tag=D1109_02410 NZ_CP031858.1 Protein Homology CDS 503671 506004 . - 0 ID=cds-WP_237611333.1;Parent=gene-D1109_RS02415;Dbxref=Genbank:WP_237611333.1;Name=WP_237611333.1;Ontology_term=GO:0005975,GO:0005978,GO:0003844,GO:0004553,GO:0043169;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA,hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,cation binding|0043169||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005616806.1;locus_tag=D1109_RS02415;product=1%2C4-alpha-glucan branching protein GlgB;protein_id=WP_237611333.1;transl_table=11 NZ_CP031858.1 RefSeq gene 506265 507773 . + . ID=gene-D1109_RS02420;Name=fruB;gbkey=Gene;gene=fruB;gene_biotype=protein_coding;locus_tag=D1109_RS02420;old_locus_tag=D1109_02415 NZ_CP031858.1 Protein Homology CDS 506265 507773 . + 0 ID=cds-WP_237611334.1;Parent=gene-D1109_RS02420;Dbxref=Genbank:WP_237611334.1;Name=WP_237611334.1;gbkey=CDS;gene=fruB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596312.1;locus_tag=D1109_RS02420;product=fused PTS fructose transporter subunit IIA/HPr protein;protein_id=WP_237611334.1;transl_table=11 NZ_CP031858.1 RefSeq gene 507788 508735 . + . ID=gene-D1109_RS02425;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=D1109_RS02425;old_locus_tag=D1109_02420 NZ_CP031858.1 Protein Homology CDS 507788 508735 . + 0 ID=cds-WP_005600444.1;Parent=gene-D1109_RS02425;Dbxref=Genbank:WP_005600444.1;Name=WP_005600444.1;Ontology_term=GO:0008662,GO:0016773;gbkey=CDS;gene=fruK;go_function=1-phosphofructokinase activity|0008662||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600444.1;locus_tag=D1109_RS02425;product=1-phosphofructokinase;protein_id=WP_005600444.1;transl_table=11 NZ_CP031858.1 RefSeq gene 508817 510478 . + . ID=gene-D1109_RS02430;Name=D1109_RS02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02430;old_locus_tag=D1109_02425 NZ_CP031858.1 Protein Homology CDS 508817 510478 . + 0 ID=cds-WP_012262788.1;Parent=gene-D1109_RS02430;Dbxref=Genbank:WP_012262788.1;Name=WP_012262788.1;Ontology_term=GO:0009401,GO:0022877,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005616804.1;locus_tag=D1109_RS02430;product=fructose-specific PTS transporter subunit EIIC;protein_id=WP_012262788.1;transl_table=11 NZ_CP031858.1 RefSeq gene 510631 511215 . + . ID=gene-D1109_RS02435;Name=D1109_RS02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02435;old_locus_tag=D1109_02430 NZ_CP031858.1 Protein Homology CDS 510631 511215 . + 0 ID=cds-WP_237611335.1;Parent=gene-D1109_RS02435;Dbxref=Genbank:WP_237611335.1;Name=WP_237611335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253607.1;locus_tag=D1109_RS02435;product=LemA family protein;protein_id=WP_237611335.1;transl_table=11 NZ_CP031858.1 RefSeq gene 511282 511731 . + . ID=gene-D1109_RS02440;Name=D1109_RS02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02440;old_locus_tag=D1109_02435 NZ_CP031858.1 Protein Homology CDS 511282 511731 . + 0 ID=cds-WP_215577680.1;Parent=gene-D1109_RS02440;Dbxref=Genbank:WP_215577680.1;Name=WP_215577680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005623246.1;locus_tag=D1109_RS02440;product=TPM domain-containing protein;protein_id=WP_215577680.1;transl_table=11 NZ_CP031858.1 RefSeq gene 511728 512567 . + . ID=gene-D1109_RS02445;Name=D1109_RS02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02445;old_locus_tag=D1109_02440 NZ_CP031858.1 Protein Homology CDS 511728 512567 . + 0 ID=cds-WP_005614588.1;Parent=gene-D1109_RS02445;Dbxref=Genbank:WP_005614588.1;Name=WP_005614588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005614588.1;locus_tag=D1109_RS02445;product=TPM domain-containing protein;protein_id=WP_005614588.1;transl_table=11 NZ_CP031858.1 RefSeq gene 512784 515423 . + . ID=gene-D1109_RS02450;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=D1109_RS02450;old_locus_tag=D1109_02445 NZ_CP031858.1 Protein Homology CDS 512784 515423 . + 0 ID=cds-WP_237611336.1;Parent=gene-D1109_RS02450;Dbxref=Genbank:WP_237611336.1;Name=WP_237611336.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;gene=ppc;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005693644.1;locus_tag=D1109_RS02450;product=phosphoenolpyruvate carboxylase;protein_id=WP_237611336.1;transl_table=11 NZ_CP031858.1 RefSeq gene 515583 516179 . + . ID=gene-D1109_RS02455;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=D1109_RS02455;old_locus_tag=D1109_02450 NZ_CP031858.1 Protein Homology CDS 515583 516179 . + 0 ID=cds-WP_005596294.1;Parent=gene-D1109_RS02455;Dbxref=Genbank:WP_005596294.1;Name=WP_005596294.1;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptC;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596294.1;locus_tag=D1109_RS02455;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_005596294.1;transl_table=11 NZ_CP031858.1 RefSeq gene 516204 516707 . + . ID=gene-D1109_RS02460;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=D1109_RS02460;old_locus_tag=D1109_02455 NZ_CP031858.1 Protein Homology CDS 516204 516707 . + 0 ID=cds-WP_005596292.1;Parent=gene-D1109_RS02460;Dbxref=Genbank:WP_005596292.1;Name=WP_005596292.1;Ontology_term=GO:0015920,GO:0001530,GO:0030288,GO:0043190;gbkey=CDS;gene=lptA;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide binding|0001530||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596292.1;locus_tag=D1109_RS02460;product=lipopolysaccharide transport periplasmic protein LptA;protein_id=WP_005596292.1;transl_table=11 NZ_CP031858.1 RefSeq gene 516717 517442 . + . ID=gene-D1109_RS02465;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=D1109_RS02465;old_locus_tag=D1109_02460 NZ_CP031858.1 Protein Homology CDS 516717 517442 . + 0 ID=cds-WP_009874654.1;Parent=gene-D1109_RS02465;Dbxref=Genbank:WP_009874654.1;Name=WP_009874654.1;Ontology_term=GO:0055085,GO:0005524,GO:0043190;gbkey=CDS;gene=lptB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005727816.1;locus_tag=D1109_RS02465;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_009874654.1;transl_table=11 NZ_CP031858.1 RefSeq gene 517492 518004 . + . ID=gene-D1109_RS02470;Name=D1109_RS02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02470;old_locus_tag=D1109_02465 NZ_CP031858.1 Protein Homology CDS 517492 518004 . + 0 ID=cds-WP_005616800.1;Parent=gene-D1109_RS02470;Dbxref=Genbank:WP_005616800.1;Name=WP_005616800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005616800.1;locus_tag=D1109_RS02470;product=PTS sugar transporter subunit IIA;protein_id=WP_005616800.1;transl_table=11 NZ_CP031858.1 RefSeq gene 518023 518889 . + . ID=gene-D1109_RS02475;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=D1109_RS02475;old_locus_tag=D1109_02470 NZ_CP031858.1 Protein Homology CDS 518023 518889 . + 0 ID=cds-WP_005596285.1;Parent=gene-D1109_RS02475;Dbxref=Genbank:WP_005596285.1;Name=WP_005596285.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600433.1;locus_tag=D1109_RS02475;product=RNase adapter RapZ;protein_id=WP_005596285.1;transl_table=11 NZ_CP031858.1 RefSeq gene 518972 520153 . + . ID=gene-D1109_RS02480;Name=D1109_RS02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02480;old_locus_tag=D1109_02475 NZ_CP031858.1 Protein Homology CDS 518972 520153 . + 0 ID=cds-WP_237611337.1;Parent=gene-D1109_RS02480;Dbxref=Genbank:WP_237611337.1;Name=WP_237611337.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600432.1;locus_tag=D1109_RS02480;product=FAD-dependent monooxygenase;protein_id=WP_237611337.1;transl_table=11 NZ_CP031858.1 RefSeq gene 520289 520768 . + . ID=gene-D1109_RS02485;Name=D1109_RS02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02485;old_locus_tag=D1109_02480 NZ_CP031858.1 Protein Homology CDS 520289 520768 . + 0 ID=cds-WP_005600431.1;Parent=gene-D1109_RS02485;Dbxref=Genbank:WP_005600431.1;Name=WP_005600431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600431.1;locus_tag=D1109_RS02485;product=hypothetical protein;protein_id=WP_005600431.1;transl_table=11 NZ_CP031858.1 RefSeq gene 520849 521502 . + . ID=gene-D1109_RS02490;Name=D1109_RS02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02490 NZ_CP031858.1 Protein Homology CDS 520849 521502 . + 0 ID=cds-WP_237611338.1;Parent=gene-D1109_RS02490;Dbxref=Genbank:WP_237611338.1;Name=WP_237611338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600430.1;locus_tag=D1109_RS02490;product=lipoprotein Hlp;protein_id=WP_237611338.1;transl_table=11 NZ_CP031858.1 RefSeq gene 521559 522035 . + . ID=gene-D1109_RS02495;Name=D1109_RS02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02495;old_locus_tag=D1109_02495 NZ_CP031858.1 Protein Homology CDS 521559 522035 . + 0 ID=cds-WP_005596280.1;Parent=gene-D1109_RS02495;Dbxref=Genbank:WP_005596280.1;Name=WP_005596280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005611477.1;locus_tag=D1109_RS02495;product=hypothetical protein;protein_id=WP_005596280.1;transl_table=11 NZ_CP031858.1 RefSeq gene 522065 523264 . - . ID=gene-D1109_RS02500;Name=ubiH;gbkey=Gene;gene=ubiH;gene_biotype=protein_coding;gene_synonym=visB;locus_tag=D1109_RS02500;old_locus_tag=D1109_02500 NZ_CP031858.1 Protein Homology CDS 522065 523264 . - 0 ID=cds-WP_237611339.1;Parent=gene-D1109_RS02500;Dbxref=Genbank:WP_237611339.1;Name=WP_237611339.1;Ontology_term=GO:0006744,GO:0008681,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiH;go_function=2-octaprenyl-6-methoxyphenol hydroxylase activity|0008681||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005619895.1;locus_tag=D1109_RS02500;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_237611339.1;transl_table=11 NZ_CP031858.1 RefSeq gene 523274 523729 . - . ID=gene-D1109_RS02505;Name=D1109_RS02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02505;old_locus_tag=D1109_02505 NZ_CP031858.1 Protein Homology CDS 523274 523729 . - 0 ID=cds-WP_009874658.1;Parent=gene-D1109_RS02505;Dbxref=Genbank:WP_009874658.1;Name=WP_009874658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005622469.1;locus_tag=D1109_RS02505;product=NUDIX hydrolase;protein_id=WP_009874658.1;transl_table=11 NZ_CP031858.1 RefSeq gene 523734 524777 . - . ID=gene-D1109_RS02510;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=D1109_RS02510;old_locus_tag=D1109_02510 NZ_CP031858.1 Protein Homology CDS 523734 524777 . - 0 ID=cds-WP_237611340.1;Parent=gene-D1109_RS02510;Dbxref=Genbank:WP_237611340.1;Name=WP_237611340.1;Ontology_term=GO:0016260,GO:0004756;gbkey=CDS;gene=selD;go_function=selenide%2C water dikinase activity|0004756||IEA;go_process=selenocysteine biosynthetic process|0016260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010786705.1;locus_tag=D1109_RS02510;product=selenide%2C water dikinase SelD;protein_id=WP_237611340.1;transl_except=(pos:complement(524727..524729)%2Caa:Sec);transl_table=11 NZ_CP031858.1 RefSeq gene 524918 526016 . + . ID=gene-D1109_RS02515;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=D1109_RS02515;old_locus_tag=D1109_02515 NZ_CP031858.1 Protein Homology CDS 524918 524992 . + 0 ID=cds-WP_100068066.1;Parent=gene-D1109_RS02515;Dbxref=Genbank:WP_100068066.1;Name=WP_100068066.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0003747;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014550889.1;locus_tag=D1109_RS02515;product=peptide chain release factor 2;protein_id=WP_100068066.1;transl_table=11 NZ_CP031858.1 Protein Homology CDS 524994 526016 . + 0 ID=cds-WP_100068066.1;Parent=gene-D1109_RS02515;Dbxref=Genbank:WP_100068066.1;Name=WP_100068066.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0003747;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014550889.1;locus_tag=D1109_RS02515;product=peptide chain release factor 2;protein_id=WP_100068066.1;transl_table=11 NZ_CP031858.1 RefSeq gene 526088 527065 . + . ID=gene-D1109_RS02520;Name=D1109_RS02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02520;old_locus_tag=D1109_02520 NZ_CP031858.1 Protein Homology CDS 526088 527065 . + 0 ID=cds-WP_011848355.1;Parent=gene-D1109_RS02520;Dbxref=Genbank:WP_011848355.1;Name=WP_011848355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005619005.1;locus_tag=D1109_RS02520;product=AEC family transporter;protein_id=WP_011848355.1;transl_table=11 NZ_CP031858.1 RefSeq gene 527104 528174 . - . ID=gene-D1109_RS02525;Name=D1109_RS02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02525;old_locus_tag=D1109_02525 NZ_CP031858.1 Protein Homology CDS 527104 528174 . - 0 ID=cds-WP_005596255.1;Parent=gene-D1109_RS02525;Dbxref=Genbank:WP_005596255.1;Name=WP_005596255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652780.1;locus_tag=D1109_RS02525;product=PhoH family protein;protein_id=WP_005596255.1;transl_table=11 NZ_CP031858.1 RefSeq gene 528183 528911 . - . ID=gene-D1109_RS02530;Name=fadR;gbkey=Gene;gene=fadR;gene_biotype=protein_coding;locus_tag=D1109_RS02530;old_locus_tag=D1109_02530 NZ_CP031858.1 Protein Homology CDS 528183 528911 . - 0 ID=cds-WP_005603595.1;Parent=gene-D1109_RS02530;Dbxref=Genbank:WP_005603595.1;Name=WP_005603595.1;Ontology_term=GO:0006355,GO:0019217,GO:0000062,GO:0003677,GO:0003700;gbkey=CDS;gene=fadR;go_function=fatty-acyl-CoA binding|0000062||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA,regulation of fatty acid metabolic process|0019217||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005614584.1;locus_tag=D1109_RS02530;product=fatty acid metabolism transcriptional regulator FadR;protein_id=WP_005603595.1;transl_table=11 NZ_CP031858.1 RefSeq gene 529076 530617 . + . ID=gene-D1109_RS02535;Name=nhaB;gbkey=Gene;gene=nhaB;gene_biotype=protein_coding;locus_tag=D1109_RS02535;old_locus_tag=D1109_02535 NZ_CP031858.1 Protein Homology CDS 529076 530617 . + 0 ID=cds-WP_005600421.1;Parent=gene-D1109_RS02535;Dbxref=Genbank:WP_005600421.1;Name=WP_005600421.1;Ontology_term=GO:0006814,GO:0015385,GO:0016021;gbkey=CDS;gene=nhaB;go_component=integral component of membrane|0016021||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005614583.1;locus_tag=D1109_RS02535;product=sodium/proton antiporter NhaB;protein_id=WP_005600421.1;transl_table=11 NZ_CP031858.1 RefSeq gene 530714 531253 . + . ID=gene-D1109_RS02540;Name=dsbB;gbkey=Gene;gene=dsbB;gene_biotype=protein_coding;locus_tag=D1109_RS02540;old_locus_tag=D1109_02540 NZ_CP031858.1 Protein Homology CDS 530714 531253 . + 0 ID=cds-WP_005596251.1;Parent=gene-D1109_RS02540;Dbxref=Genbank:WP_005596251.1;Name=WP_005596251.1;Ontology_term=GO:0006457,GO:0015035,GO:0016021;gbkey=CDS;gene=dsbB;go_component=integral component of membrane|0016021||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005614582.1;locus_tag=D1109_RS02540;product=disulfide bond formation protein DsbB;protein_id=WP_005596251.1;transl_table=11 NZ_CP031858.1 RefSeq gene 531330 532520 . + . ID=gene-D1109_RS02545;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=D1109_RS02545;old_locus_tag=D1109_02545 NZ_CP031858.1 Protein Homology CDS 531330 532520 . + 0 ID=cds-WP_005607069.1;Parent=gene-D1109_RS02545;Dbxref=Genbank:WP_005607069.1;Name=WP_005607069.1;Ontology_term=GO:0006520,GO:0019346,GO:0004121,GO:0030170;gbkey=CDS;gene=metC;go_function=cystathionine beta-lyase activity|0004121||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=cellular amino acid metabolic process|0006520||IEA,transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596249.1;locus_tag=D1109_RS02545;product=cystathionine beta-lyase;protein_id=WP_005607069.1;transl_table=11 NZ_CP031858.1 RefSeq gene 532636 533676 . + . ID=gene-D1109_RS02550;Name=D1109_RS02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02550;old_locus_tag=D1109_02550 NZ_CP031858.1 Protein Homology CDS 532636 533676 . + 0 ID=cds-WP_005603118.1-3;Parent=gene-D1109_RS02550;Dbxref=Genbank:WP_005603118.1;Name=WP_005603118.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015587011.1;locus_tag=D1109_RS02550;product=IS481 family transposase;protein_id=WP_005603118.1;transl_table=11 NZ_CP031858.1 RefSeq gene 533715 534749 . - . ID=gene-D1109_RS02555;Name=D1109_RS02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02555;old_locus_tag=D1109_02555 NZ_CP031858.1 Protein Homology CDS 533715 534749 . - 0 ID=cds-WP_237611341.1;Parent=gene-D1109_RS02555;Dbxref=Genbank:WP_237611341.1;Name=WP_237611341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005620630.1;locus_tag=D1109_RS02555;product=FRG domain-containing protein;protein_id=WP_237611341.1;transl_table=11 NZ_CP031858.1 RefSeq gene 534742 535305 . - . ID=gene-D1109_RS02560;Name=D1109_RS02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02560;old_locus_tag=D1109_02560 NZ_CP031858.1 Protein Homology CDS 534742 535305 . - 0 ID=cds-WP_005619681.1;Parent=gene-D1109_RS02560;Dbxref=Genbank:WP_005619681.1;Name=WP_005619681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005619681.1;locus_tag=D1109_RS02560;product=ImmA/IrrE family metallo-endopeptidase;protein_id=WP_005619681.1;transl_table=11 NZ_CP031858.1 RefSeq gene 535459 535797 . - . ID=gene-D1109_RS02565;Name=D1109_RS02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02565;old_locus_tag=D1109_02565 NZ_CP031858.1 Protein Homology CDS 535459 535797 . - 0 ID=cds-WP_005608137.1;Parent=gene-D1109_RS02565;Dbxref=Genbank:WP_005608137.1;Name=WP_005608137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005608137.1;locus_tag=D1109_RS02565;product=helix-turn-helix domain-containing protein;protein_id=WP_005608137.1;transl_table=11 NZ_CP031858.1 RefSeq gene 535881 536915 . + . ID=gene-D1109_RS02570;Name=D1109_RS02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02570;old_locus_tag=D1109_02570 NZ_CP031858.1 Protein Homology CDS 535881 536915 . + 0 ID=cds-WP_237611342.1;Parent=gene-D1109_RS02570;Dbxref=Genbank:WP_237611342.1;Name=WP_237611342.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005605571.1;locus_tag=D1109_RS02570;product=IS1595 family transposase;protein_id=WP_237611342.1;transl_table=11 NZ_CP031858.1 RefSeq gene 536915 537349 . + . ID=gene-D1109_RS02575;Name=D1109_RS02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02575;old_locus_tag=D1109_02575 NZ_CP031858.1 Protein Homology CDS 536915 537349 . + 0 ID=cds-WP_005601307.1;Parent=gene-D1109_RS02575;Dbxref=Genbank:WP_005601307.1;Name=WP_005601307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005601307.1;locus_tag=D1109_RS02575;product=hypothetical protein;protein_id=WP_005601307.1;transl_table=11 NZ_CP031858.1 RefSeq gene 537350 537763 . - . ID=gene-D1109_RS02580;Name=D1109_RS02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02580;old_locus_tag=D1109_02580 NZ_CP031858.1 Protein Homology CDS 537350 537763 . - 0 ID=cds-WP_005601309.1;Parent=gene-D1109_RS02580;Dbxref=Genbank:WP_005601309.1;Name=WP_005601309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005601309.1;locus_tag=D1109_RS02580;product=hypothetical protein;protein_id=WP_005601309.1;transl_table=11 NZ_CP031858.1 RefSeq pseudogene 537853 538353 . - . ID=gene-D1109_RS02585;Name=D1109_RS02585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D1109_RS02585;old_locus_tag=D1109_02585;partial=true;pseudo=true;start_range=.,537853 NZ_CP031858.1 Protein Homology CDS 537853 538353 . - 0 ID=cds-D1109_RS02585;Parent=gene-D1109_RS02585;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_140441271.1;locus_tag=D1109_RS02585;partial=true;product=cysteine peptidase family C39 domain-containing protein;pseudo=true;start_range=.,537853;transl_table=11 NZ_CP031858.1 RefSeq gene 538418 541288 . - . ID=gene-D1109_RS02590;Name=D1109_RS02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02590;old_locus_tag=D1109_02590 NZ_CP031858.1 Protein Homology CDS 538418 541288 . - 0 ID=cds-WP_005597652.1;Parent=gene-D1109_RS02590;Dbxref=Genbank:WP_005597652.1;Name=WP_005597652.1;Ontology_term=GO:0005509,GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;go_function=calcium ion binding|0005509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005608143.1;locus_tag=D1109_RS02590;product=RTX family hemolysin;protein_id=WP_005597652.1;transl_table=11 NZ_CP031858.1 RefSeq gene 541327 541809 . - . ID=gene-D1109_RS02595;Name=apxIIC;gbkey=Gene;gene=apxIIC;gene_biotype=protein_coding;gene_synonym=appC,ashC,clyIIC;locus_tag=D1109_RS02595;old_locus_tag=D1109_02595 NZ_CP031858.1 Protein Homology CDS 541327 541809 . - 0 ID=cds-WP_012263032.1;Parent=gene-D1109_RS02595;Dbxref=Genbank:WP_012263032.1;Name=WP_012263032.1;gbkey=CDS;gene=apxIIC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263032.1;locus_tag=D1109_RS02595;product=RTX-II toxin-activating lysine-acyltransferase ApxIIC;protein_id=WP_012263032.1;transl_table=11 NZ_CP031858.1 RefSeq gene 541985 543214 . - . ID=gene-D1109_RS02600;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=D1109_RS02600;old_locus_tag=D1109_02600 NZ_CP031858.1 Protein Homology CDS 541985 543214 . - 0 ID=cds-WP_043990926.1;Parent=gene-D1109_RS02600;Dbxref=Genbank:WP_043990926.1;Name=WP_043990926.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=ribonuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875547.1;locus_tag=D1109_RS02600;product=rRNA maturation RNase YbeY;protein_id=WP_043990926.1;transl_table=11 NZ_CP031858.1 RefSeq gene 543637 545226 . + . ID=gene-D1109_RS02605;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=D1109_RS02605;old_locus_tag=D1109_02605 NZ_CP031858.1 Protein Homology CDS 543637 545226 . + 0 ID=cds-WP_005619692.1;Parent=gene-D1109_RS02605;Dbxref=Genbank:WP_005619692.1;Name=WP_005619692.1;Ontology_term=GO:0009152,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005821463.1;locus_tag=D1109_RS02605;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_005619692.1;transl_table=11 NZ_CP031858.1 RefSeq gene 545452 545790 . - . ID=gene-D1109_RS02610;Name=D1109_RS02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02610;old_locus_tag=D1109_02610 NZ_CP031858.1 Protein Homology CDS 545452 545790 . - 0 ID=cds-WP_012478461.1;Parent=gene-D1109_RS02610;Dbxref=Genbank:WP_012478461.1;Name=WP_012478461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012478461.1;locus_tag=D1109_RS02610;product=hypothetical protein;protein_id=WP_012478461.1;transl_table=11 NZ_CP031858.1 RefSeq gene 545805 546113 . - . ID=gene-D1109_RS02615;Name=D1109_RS02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02615;old_locus_tag=D1109_02615 NZ_CP031858.1 Protein Homology CDS 545805 546113 . - 0 ID=cds-WP_017357844.1;Parent=gene-D1109_RS02615;Dbxref=Genbank:WP_017357844.1;Name=WP_017357844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005620623.1;locus_tag=D1109_RS02615;product=hypothetical protein;protein_id=WP_017357844.1;transl_table=11 NZ_CP031858.1 RefSeq gene 546514 546846 . - . ID=gene-D1109_RS02620;Name=D1109_RS02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02620;old_locus_tag=D1109_02620 NZ_CP031858.1 Protein Homology CDS 546514 546846 . - 0 ID=cds-WP_005620622.1;Parent=gene-D1109_RS02620;Dbxref=Genbank:WP_005620622.1;Name=WP_005620622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005620622.1;locus_tag=D1109_RS02620;product=hypothetical protein;protein_id=WP_005620622.1;transl_table=11 NZ_CP031858.1 RefSeq gene 547225 547524 . - . ID=gene-D1109_RS02625;Name=D1109_RS02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02625;old_locus_tag=D1109_02630 NZ_CP031858.1 Protein Homology CDS 547225 547524 . - 0 ID=cds-WP_005619696.1;Parent=gene-D1109_RS02625;Dbxref=Genbank:WP_005619696.1;Name=WP_005619696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005619696.1;locus_tag=D1109_RS02625;product=hypothetical protein;protein_id=WP_005619696.1;transl_table=11 NZ_CP031858.1 RefSeq gene 547521 555314 . - . ID=gene-D1109_RS02630;Name=D1109_RS02630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02630;old_locus_tag=D1109_02635 NZ_CP031858.1 Protein Homology CDS 547521 555314 . - 0 ID=cds-WP_237611343.1;Parent=gene-D1109_RS02630;Dbxref=Genbank:WP_237611343.1;Name=WP_237611343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263037.1;locus_tag=D1109_RS02630;product=hemagglutinin repeat-containing protein;protein_id=WP_237611343.1;transl_table=11 NZ_CP031858.1 RefSeq gene 555362 557128 . - . ID=gene-D1109_RS02635;Name=D1109_RS02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02635;old_locus_tag=D1109_02640 NZ_CP031858.1 Protein Homology CDS 555362 557128 . - 0 ID=cds-WP_237611344.1;Parent=gene-D1109_RS02635;Dbxref=Genbank:WP_237611344.1;Name=WP_237611344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005601338.1;locus_tag=D1109_RS02635;product=ShlB/FhaC/HecB family hemolysin secretion/activation protein;protein_id=WP_237611344.1;transl_table=11 NZ_CP031858.1 RefSeq gene 557317 559653 . - . ID=gene-D1109_RS02640;Name=lptD;gbkey=Gene;gene=lptD;gene_biotype=protein_coding;locus_tag=D1109_RS02640;old_locus_tag=D1109_02645 NZ_CP031858.1 Protein Homology CDS 557317 559653 . - 0 ID=cds-WP_237611345.1;Parent=gene-D1109_RS02640;Dbxref=Genbank:WP_237611345.1;Name=WP_237611345.1;Ontology_term=GO:0010033,GO:0015920,GO:0043165,GO:0019867;gbkey=CDS;gene=lptD;go_component=outer membrane|0019867||IEA;go_process=response to organic substance|0010033||IEA,lipopolysaccharide transport|0015920||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005617440.1;locus_tag=D1109_RS02640;product=LPS assembly protein LptD;protein_id=WP_237611345.1;transl_table=11 NZ_CP031858.1 RefSeq gene 559710 561077 . - . ID=gene-D1109_RS02645;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=D1109_RS02645;old_locus_tag=D1109_02650 NZ_CP031858.1 Protein Homology CDS 559710 561077 . - 0 ID=cds-WP_005610227.1;Parent=gene-D1109_RS02645;Dbxref=Genbank:WP_005610227.1;Name=WP_005610227.1;Ontology_term=GO:0006779,GO:0051989;gbkey=CDS;gene=hemN;go_function=coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651795.1;locus_tag=D1109_RS02645;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=WP_005610227.1;transl_table=11 NZ_CP031858.1 RefSeq gene 561107 561574 . - . ID=gene-D1109_RS02650;Name=D1109_RS02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02650;old_locus_tag=D1109_02655 NZ_CP031858.1 Protein Homology CDS 561107 561574 . - 0 ID=cds-WP_005597667.1;Parent=gene-D1109_RS02650;Dbxref=Genbank:WP_005597667.1;Name=WP_005597667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263040.1;locus_tag=D1109_RS02650;product=DUF2489 domain-containing protein;protein_id=WP_005597667.1;transl_table=11 NZ_CP031858.1 RefSeq gene 561590 562168 . - . ID=gene-D1109_RS02655;Name=yihI;gbkey=Gene;gene=yihI;gene_biotype=protein_coding;locus_tag=D1109_RS02655;old_locus_tag=D1109_02660 NZ_CP031858.1 Protein Homology CDS 561590 562168 . - 0 ID=cds-WP_005608169.1;Parent=gene-D1109_RS02655;Dbxref=Genbank:WP_005608169.1;Name=WP_005608169.1;gbkey=CDS;gene=yihI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005608169.1;locus_tag=D1109_RS02655;product=Der GTPase-activating protein YihI;protein_id=WP_005608169.1;transl_table=11 NZ_CP031858.1 RefSeq gene 562317 563975 . - . ID=gene-D1109_RS02660;Name=D1109_RS02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02660;old_locus_tag=D1109_02665 NZ_CP031858.1 Protein Homology CDS 562317 563975 . - 0 ID=cds-WP_009875252.1;Parent=gene-D1109_RS02660;Dbxref=Genbank:WP_009875252.1;Name=WP_009875252.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012478464.1;locus_tag=D1109_RS02660;product=putative transporter;protein_id=WP_009875252.1;transl_table=11 NZ_CP031858.1 RefSeq gene 564237 565454 . + . ID=gene-D1109_RS02665;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=D1109_RS02665;old_locus_tag=D1109_02670 NZ_CP031858.1 Protein Homology CDS 564237 565454 . + 0 ID=cds-WP_005619708.1;Parent=gene-D1109_RS02665;Dbxref=Genbank:WP_005619708.1;Name=WP_005619708.1;Ontology_term=GO:0015813,GO:0015501;gbkey=CDS;gene=gltS;go_function=glutamate:sodium symporter activity|0015501||IEA;go_process=L-glutamate transmembrane transport|0015813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005623378.1;locus_tag=D1109_RS02665;product=sodium/glutamate symporter;protein_id=WP_005619708.1;transl_table=11 NZ_CP031858.1 RefSeq gene 565594 566382 . - . ID=gene-D1109_RS02670;Name=D1109_RS02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02670;old_locus_tag=D1109_02675 NZ_CP031858.1 Protein Homology CDS 565594 566382 . - 0 ID=cds-WP_005599960.1;Parent=gene-D1109_RS02670;Dbxref=Genbank:WP_005599960.1;Name=WP_005599960.1;Ontology_term=GO:0006313;gbkey=CDS;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618583.1;locus_tag=D1109_RS02670;product=transposase;protein_id=WP_005599960.1;transl_table=11 NZ_CP031858.1 RefSeq gene 566622 566999 . - . ID=gene-D1109_RS02675;Name=D1109_RS02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02675;old_locus_tag=D1109_02680 NZ_CP031858.1 Protein Homology CDS 566622 566999 . - 0 ID=cds-WP_005604662.1;Parent=gene-D1109_RS02675;Dbxref=Genbank:WP_005604662.1;Name=WP_005604662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875251.1;locus_tag=D1109_RS02675;product=YacL family protein;protein_id=WP_005604662.1;transl_table=11 NZ_CP031858.1 RefSeq gene 567096 569975 . - . ID=gene-D1109_RS02680;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=D1109_RS02680;old_locus_tag=D1109_02685 NZ_CP031858.1 Protein Homology CDS 567096 569975 . - 0 ID=cds-WP_237611346.1;Parent=gene-D1109_RS02680;Dbxref=Genbank:WP_237611346.1;Name=WP_237611346.1;Ontology_term=GO:0008882;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991164.1;locus_tag=D1109_RS02680;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;protein_id=WP_237611346.1;transl_table=11 NZ_CP031858.1 RefSeq gene 570050 570331 . - . ID=gene-D1109_RS02685;Name=D1109_RS02685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02685;old_locus_tag=D1109_02690 NZ_CP031858.1 Protein Homology CDS 570050 570331 . - 0 ID=cds-WP_005601351.1;Parent=gene-D1109_RS02685;Dbxref=Genbank:WP_005601351.1;Name=WP_005601351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006717394.1;locus_tag=D1109_RS02685;product=YciI family protein;protein_id=WP_005601351.1;transl_table=11 NZ_CP031858.1 RefSeq gene 570342 570833 . - . ID=gene-D1109_RS02690;Name=yciA;gbkey=Gene;gene=yciA;gene_biotype=protein_coding;locus_tag=D1109_RS02690;old_locus_tag=D1109_02695 NZ_CP031858.1 Protein Homology CDS 570342 570833 . - 0 ID=cds-WP_005597679.1;Parent=gene-D1109_RS02690;Dbxref=Genbank:WP_005597679.1;Name=WP_005597679.1;Ontology_term=GO:0016790;gbkey=CDS;gene=yciA;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597679.1;locus_tag=D1109_RS02690;product=acyl-CoA thioester hydrolase YciA;protein_id=WP_005597679.1;transl_table=11 NZ_CP031858.1 RefSeq gene 570820 571371 . - . ID=gene-D1109_RS02695;Name=D1109_RS02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02695;old_locus_tag=D1109_02700 NZ_CP031858.1 Protein Homology CDS 570820 571371 . - 0 ID=cds-WP_005597680.1;Parent=gene-D1109_RS02695;Dbxref=Genbank:WP_005597680.1;Name=WP_005597680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597680.1;locus_tag=D1109_RS02695;product=septation protein A;protein_id=WP_005597680.1;transl_table=11 NZ_CP031858.1 RefSeq gene 571373 572110 . - . ID=gene-D1109_RS02700;Name=D1109_RS02700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02700;old_locus_tag=D1109_02705 NZ_CP031858.1 Protein Homology CDS 571373 572110 . - 0 ID=cds-WP_043995324.1;Parent=gene-D1109_RS02700;Dbxref=Genbank:WP_043995324.1;Name=WP_043995324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012478466.1;locus_tag=D1109_RS02700;product=hypothetical protein;protein_id=WP_043995324.1;transl_table=11 NZ_CP031858.1 RefSeq gene 572269 572703 . + . ID=gene-D1109_RS02705;Name=D1109_RS02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02705;old_locus_tag=D1109_02710 NZ_CP031858.1 Protein Homology CDS 572269 572703 . + 0 ID=cds-WP_005597682.1;Parent=gene-D1109_RS02705;Dbxref=Genbank:WP_005597682.1;Name=WP_005597682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652771.1;locus_tag=D1109_RS02705;product=DUF412 domain-containing protein;protein_id=WP_005597682.1;transl_table=11 NZ_CP031858.1 RefSeq gene 572871 573827 . + . ID=gene-D1109_RS02710;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;locus_tag=D1109_RS02710;old_locus_tag=D1109_02715 NZ_CP031858.1 Protein Homology CDS 572871 573827 . + 0 ID=cds-WP_005601354.1;Parent=gene-D1109_RS02710;Dbxref=Genbank:WP_005601354.1;Name=WP_005601354.1;Ontology_term=GO:0008033;gbkey=CDS;gene=ttcA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005617454.1;locus_tag=D1109_RS02710;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=WP_005601354.1;transl_table=11 NZ_CP031858.1 RefSeq gene 574034 575410 . + . ID=gene-D1109_RS02715;Name=D1109_RS02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02715;old_locus_tag=D1109_02720 NZ_CP031858.1 Protein Homology CDS 574034 575410 . + 0 ID=cds-WP_005597685.1;Parent=gene-D1109_RS02715;Dbxref=Genbank:WP_005597685.1;Name=WP_005597685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005617456.1;locus_tag=D1109_RS02715;product=Na+/H+ antiporter family protein;protein_id=WP_005597685.1;transl_table=11 NZ_CP031858.1 RefSeq gene 575501 576304 . + . ID=gene-D1109_RS02720;Name=xthA;gbkey=Gene;gene=xthA;gene_biotype=protein_coding;locus_tag=D1109_RS02720;old_locus_tag=D1109_02725 NZ_CP031858.1 Protein Homology CDS 575501 576304 . + 0 ID=cds-WP_005619715.1;Parent=gene-D1109_RS02720;Dbxref=Genbank:WP_005619715.1;Name=WP_005619715.1;Ontology_term=GO:0006281,GO:0003677,GO:0004519,GO:0008853;gbkey=CDS;gene=xthA;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,exodeoxyribonuclease III activity|0008853||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652774.1;locus_tag=D1109_RS02720;product=exodeoxyribonuclease III;protein_id=WP_005619715.1;transl_table=11 NZ_CP031858.1 RefSeq gene 576368 577252 . - . ID=gene-D1109_RS02725;Name=ilvY;gbkey=Gene;gene=ilvY;gene_biotype=protein_coding;locus_tag=D1109_RS02725;old_locus_tag=D1109_02730 NZ_CP031858.1 Protein Homology CDS 576368 577252 . - 0 ID=cds-WP_005597688.1;Parent=gene-D1109_RS02725;Dbxref=Genbank:WP_005597688.1;Name=WP_005597688.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ilvY;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652775.1;locus_tag=D1109_RS02725;product=HTH-type transcriptional activator IlvY;protein_id=WP_005597688.1;transl_table=11 NZ_CP031858.1 RefSeq gene 577253 578293 . - . ID=gene-D1109_RS02730;Name=D1109_RS02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02730;old_locus_tag=D1109_02735 NZ_CP031858.1 Protein Homology CDS 577253 578293 . - 0 ID=cds-WP_011848508.1;Parent=gene-D1109_RS02730;Dbxref=Genbank:WP_011848508.1;Name=WP_011848508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263045.1;locus_tag=D1109_RS02730;product=glycosyltransferase family 9 protein;protein_id=WP_011848508.1;transl_table=11 NZ_CP031858.1 RefSeq gene 578295 578978 . - . ID=gene-D1109_RS02735;Name=D1109_RS02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02735;old_locus_tag=D1109_02740 NZ_CP031858.1 Protein Homology CDS 578295 578978 . - 0 ID=cds-WP_005604674.1;Parent=gene-D1109_RS02735;Dbxref=Genbank:WP_005604674.1;Name=WP_005604674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991154.1;locus_tag=D1109_RS02735;product=glycosyltransferase family 25 protein;protein_id=WP_005604674.1;transl_table=11 NZ_CP031858.1 RefSeq gene 579087 580148 . + . ID=gene-D1109_RS02740;Name=D1109_RS02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02740;old_locus_tag=D1109_02745 NZ_CP031858.1 Protein Homology CDS 579087 580148 . + 0 ID=cds-WP_005612325.1;Parent=gene-D1109_RS02740;Dbxref=Genbank:WP_005612325.1;Name=WP_005612325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991153.1;locus_tag=D1109_RS02740;product=glycosyltransferase family 9 protein;protein_id=WP_005612325.1;transl_table=11 NZ_CP031858.1 RefSeq gene 580210 580422 . - . ID=gene-D1109_RS02745;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=D1109_RS02745;old_locus_tag=D1109_02750 NZ_CP031858.1 Protein Homology CDS 580210 580422 . - 0 ID=cds-WP_005597698.1;Parent=gene-D1109_RS02745;Dbxref=Genbank:WP_005597698.1;Name=WP_005597698.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmE;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005625828.1;locus_tag=D1109_RS02745;product=50S ribosomal protein L31;protein_id=WP_005597698.1;transl_table=11 NZ_CP031858.1 RefSeq gene 580804 582810 . + . ID=gene-D1109_RS02750;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=D1109_RS02750;old_locus_tag=D1109_02755 NZ_CP031858.1 Protein Homology CDS 580804 582810 . + 0 ID=cds-WP_005601360.1;Parent=gene-D1109_RS02750;Dbxref=Genbank:WP_005601360.1;Name=WP_005601360.1;Ontology_term=GO:0006098,GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005639188.1;locus_tag=D1109_RS02750;product=transketolase;protein_id=WP_005601360.1;transl_table=11 NZ_CP031858.1 RefSeq gene 582944 584821 . - . ID=gene-D1109_RS02755;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=D1109_RS02755;old_locus_tag=D1109_02760 NZ_CP031858.1 Protein Homology CDS 582944 584821 . - 0 ID=cds-WP_237611347.1;Parent=gene-D1109_RS02755;Dbxref=Genbank:WP_237611347.1;Name=WP_237611347.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874843.1;locus_tag=D1109_RS02755;product=molecular chaperone HtpG;protein_id=WP_237611347.1;transl_table=11 NZ_CP031858.1 RefSeq gene 585049 586575 . + . ID=gene-D1109_RS02760;Name=D1109_RS02760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02760;old_locus_tag=D1109_02765 NZ_CP031858.1 Protein Homology CDS 585049 586575 . + 0 ID=cds-WP_011848509.1;Parent=gene-D1109_RS02760;Dbxref=Genbank:WP_011848509.1;Name=WP_011848509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012478468.1;locus_tag=D1109_RS02760;product=catalase;protein_id=WP_011848509.1;transl_table=11 NZ_CP031858.1 RefSeq gene 586742 586921 . + . ID=gene-D1109_RS02765;Name=D1109_RS02765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02765 NZ_CP031858.1 Protein Homology CDS 586742 586921 . + 0 ID=cds-WP_005597706.1;Parent=gene-D1109_RS02765;Dbxref=Genbank:WP_005597706.1;Name=WP_005597706.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024908.2;locus_tag=D1109_RS02765;product=helix-turn-helix domain containing protein;protein_id=WP_005597706.1;transl_table=11 NZ_CP031858.1 RefSeq pseudogene 586917 587279 . + . ID=gene-D1109_RS02770;Name=D1109_RS02770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D1109_RS02770;old_locus_tag=D1109_02770;partial=true;pseudo=true;start_range=.,586917 NZ_CP031858.1 Protein Homology CDS 586917 587279 . + 0 ID=cds-D1109_RS02770;Parent=gene-D1109_RS02770;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612107.1;locus_tag=D1109_RS02770;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,586917;transl_table=11 NZ_CP031858.1 RefSeq gene 587392 588471 . + . ID=gene-D1109_RS02775;Name=D1109_RS02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02775;old_locus_tag=D1109_02775 NZ_CP031858.1 Protein Homology CDS 587392 588471 . + 0 ID=cds-WP_237611348.1;Parent=gene-D1109_RS02775;Dbxref=Genbank:WP_237611348.1;Name=WP_237611348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604690.1;locus_tag=D1109_RS02775;product=metallophosphoesterase;protein_id=WP_237611348.1;transl_table=11 NZ_CP031858.1 RefSeq gene 588685 590955 . + . ID=gene-D1109_RS02780;Name=nrdA;gbkey=Gene;gene=nrdA;gene_biotype=protein_coding;locus_tag=D1109_RS02780;old_locus_tag=D1109_02780 NZ_CP031858.1 Protein Homology CDS 588685 590955 . + 0 ID=cds-WP_005597712.1;Parent=gene-D1109_RS02780;Dbxref=Genbank:WP_005597712.1;Name=WP_005597712.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018356743.1;locus_tag=D1109_RS02780;product=ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_005597712.1;transl_table=11 NZ_CP031858.1 RefSeq gene 591252 592382 . + . ID=gene-D1109_RS02785;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;locus_tag=D1109_RS02785;old_locus_tag=D1109_02785 NZ_CP031858.1 Protein Homology CDS 591252 592382 . + 0 ID=cds-WP_039196347.1;Parent=gene-D1109_RS02785;Dbxref=Genbank:WP_039196347.1;Name=WP_039196347.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;gene=nrdB;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007241315.1;locus_tag=D1109_RS02785;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=WP_039196347.1;transl_table=11 NZ_CP031858.1 RefSeq gene 592644 593693 . + . ID=gene-D1109_RS02790;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=D1109_RS02790;old_locus_tag=D1109_02790 NZ_CP031858.1 Protein Homology CDS 592644 593693 . + 0 ID=cds-WP_237611349.1;Parent=gene-D1109_RS02790;Dbxref=Genbank:WP_237611349.1;Name=WP_237611349.1;Ontology_term=GO:0006012,GO:0008108;gbkey=CDS;gene=galT;go_function=UDP-glucose:hexose-1-phosphate uridylyltransferase activity|0008108||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604695.1;locus_tag=D1109_RS02790;product=galactose-1-phosphate uridylyltransferase;protein_id=WP_237611349.1;transl_table=11 NZ_CP031858.1 RefSeq gene 593721 594875 . + . ID=gene-D1109_RS02795;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=D1109_RS02795;old_locus_tag=D1109_02795 NZ_CP031858.1 Protein Homology CDS 593721 594875 . + 0 ID=cds-WP_237593649.1;Parent=gene-D1109_RS02795;Dbxref=Genbank:WP_237593649.1;Name=WP_237593649.1;Ontology_term=GO:0006012,GO:0046835,GO:0004335,GO:0005524;gbkey=CDS;gene=galK;go_function=galactokinase activity|0004335||IEA,ATP binding|0005524||IEA;go_process=galactose metabolic process|0006012||IEA,carbohydrate phosphorylation|0046835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005608209.1;locus_tag=D1109_RS02795;product=galactokinase;protein_id=WP_237593649.1;transl_table=11 NZ_CP031858.1 RefSeq gene 594933 595901 . + . ID=gene-D1109_RS02800;Name=D1109_RS02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02800;old_locus_tag=D1109_02800 NZ_CP031858.1 Protein Homology CDS 594933 595901 . + 0 ID=cds-WP_237611350.1;Parent=gene-D1109_RS02800;Dbxref=Genbank:WP_237611350.1;Name=WP_237611350.1;Ontology_term=GO:0005975,GO:0016853,GO:0030246;gbkey=CDS;go_function=isomerase activity|0016853||IEA,carbohydrate binding|0030246||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005619720.1;locus_tag=D1109_RS02800;product=galactose-1-epimerase;protein_id=WP_237611350.1;transl_table=11 NZ_CP031858.1 RefSeq gene 595926 598946 . + . ID=gene-D1109_RS02805;Name=D1109_RS02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02805;old_locus_tag=D1109_02805 NZ_CP031858.1 Protein Homology CDS 595926 598946 . + 0 ID=cds-WP_011848510.1;Parent=gene-D1109_RS02805;Dbxref=Genbank:WP_011848510.1;Name=WP_011848510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011848510.1;locus_tag=D1109_RS02805;product=DUF4981 domain-containing protein;protein_id=WP_011848510.1;transl_table=11 NZ_CP031858.1 RefSeq gene 599064 604919 . - . ID=gene-D1109_RS02810;Name=D1109_RS02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02810;old_locus_tag=D1109_02810 NZ_CP031858.1 Protein Homology CDS 599064 604919 . - 0 ID=cds-WP_237611351.1;Parent=gene-D1109_RS02810;Dbxref=Genbank:WP_237611351.1;Name=WP_237611351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005619721.1;locus_tag=D1109_RS02810;product=calcium-binding protein;protein_id=WP_237611351.1;transl_table=11 NZ_CP031858.1 RefSeq gene 604948 605424 . - . ID=gene-D1109_RS02815;Name=D1109_RS02815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02815;old_locus_tag=D1109_02815 NZ_CP031858.1 Protein Homology CDS 604948 605424 . - 0 ID=cds-WP_009874835.1;Parent=gene-D1109_RS02815;Dbxref=Genbank:WP_009874835.1;Name=WP_009874835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005601399.1;locus_tag=D1109_RS02815;product=hypothetical protein;protein_id=WP_009874835.1;transl_table=11 NZ_CP031858.1 RefSeq gene 605621 606718 . - . ID=gene-D1109_RS02820;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=protein_coding;locus_tag=D1109_RS02820;old_locus_tag=D1109_02820 NZ_CP031858.1 Protein Homology CDS 605621 606718 . - 0 ID=cds-WP_237611352.1;Parent=gene-D1109_RS02820;Dbxref=Genbank:WP_237611352.1;Name=WP_237611352.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0051536;gbkey=CDS;gene=apbC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005617485.1;locus_tag=D1109_RS02820;product=iron-sulfur cluster carrier protein ApbC;protein_id=WP_237611352.1;transl_table=11 NZ_CP031858.1 RefSeq gene 606722 608272 . - . ID=gene-D1109_RS02825;Name=D1109_RS02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02825;old_locus_tag=D1109_02825 NZ_CP031858.1 Protein Homology CDS 606722 608272 . - 0 ID=cds-WP_237611353.1;Parent=gene-D1109_RS02825;Dbxref=Genbank:WP_237611353.1;Name=WP_237611353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005612364.1;locus_tag=D1109_RS02825;product=peptide ABC transporter substrate-binding protein;protein_id=WP_237611353.1;transl_table=11 NZ_CP031858.1 RefSeq gene 608287 608940 . - . ID=gene-D1109_RS02830;Name=D1109_RS02830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02830;old_locus_tag=D1109_02830 NZ_CP031858.1 Protein Homology CDS 608287 608940 . - 0 ID=cds-WP_237611354.1;Parent=gene-D1109_RS02830;Dbxref=Genbank:WP_237611354.1;Name=WP_237611354.1;Ontology_term=GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604715.1;locus_tag=D1109_RS02830;product=YchE family NAAT transporter;protein_id=WP_237611354.1;transl_table=11 NZ_CP031858.1 RefSeq gene 609062 610939 . - . ID=gene-D1109_RS02835;Name=D1109_RS02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02835;old_locus_tag=D1109_02835 NZ_CP031858.1 Protein Homology CDS 609062 610939 . - 0 ID=cds-WP_237611355.1;Parent=gene-D1109_RS02835;Dbxref=Genbank:WP_237611355.1;Name=WP_237611355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005615357.1;locus_tag=D1109_RS02835;product=SurA N-terminal domain-containing protein;protein_id=WP_237611355.1;transl_table=11 NZ_CP031858.1 RefSeq gene 611168 612481 . + . ID=gene-D1109_RS02840;Name=D1109_RS02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02840;old_locus_tag=D1109_02840 NZ_CP031858.1 Protein Homology CDS 611168 612481 . + 0 ID=cds-WP_237611356.1;Parent=gene-D1109_RS02840;Dbxref=Genbank:WP_237611356.1;Name=WP_237611356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263054.1;locus_tag=D1109_RS02840;product=sodium:proton antiporter;protein_id=WP_237611356.1;transl_table=11 NZ_CP031858.1 RefSeq gene 612603 612872 . + . ID=gene-D1109_RS02845;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=D1109_RS02845;old_locus_tag=D1109_02845 NZ_CP031858.1 Protein Homology CDS 612603 612872 . + 0 ID=cds-WP_005597777.1;Parent=gene-D1109_RS02845;Dbxref=Genbank:WP_005597777.1;Name=WP_005597777.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsO;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1;locus_tag=D1109_RS02845;product=30S ribosomal protein S15;protein_id=WP_005597777.1;transl_table=11 NZ_CP031858.1 RefSeq gene 612950 613819 . + . ID=gene-D1109_RS02850;Name=D1109_RS02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02850;old_locus_tag=D1109_02850 NZ_CP031858.1 Protein Homology CDS 612950 613819 . + 0 ID=cds-WP_237611357.1;Parent=gene-D1109_RS02850;Dbxref=Genbank:WP_237611357.1;Name=WP_237611357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874830.1;locus_tag=D1109_RS02850;product=DUF808 domain-containing protein;protein_id=WP_237611357.1;transl_table=11 NZ_CP031858.1 RefSeq gene 613876 615126 . - . ID=gene-D1109_RS02855;Name=D1109_RS02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02855;old_locus_tag=D1109_02855 NZ_CP031858.1 Protein Homology CDS 613876 615126 . - 0 ID=cds-WP_039709561.1;Parent=gene-D1109_RS02855;Dbxref=Genbank:WP_039709561.1;Name=WP_039709561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005620611.1;locus_tag=D1109_RS02855;product=heme biosynthesis protein HemY;protein_id=WP_039709561.1;transl_table=11 NZ_CP031858.1 RefSeq gene 615138 616478 . - . ID=gene-D1109_RS02860;Name=D1109_RS02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02860;old_locus_tag=D1109_02860 NZ_CP031858.1 Protein Homology CDS 615138 616478 . - 0 ID=cds-WP_005608223.1;Parent=gene-D1109_RS02860;Dbxref=Genbank:WP_005608223.1;Name=WP_005608223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005608223.1;locus_tag=D1109_RS02860;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_005608223.1;transl_table=11 NZ_CP031858.1 RefSeq gene 616488 617252 . - . ID=gene-D1109_RS02865;Name=D1109_RS02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02865;old_locus_tag=D1109_02865 NZ_CP031858.1 Protein Homology CDS 616488 617252 . - 0 ID=cds-WP_005608224.1;Parent=gene-D1109_RS02865;Dbxref=Genbank:WP_005608224.1;Name=WP_005608224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005612368.1;locus_tag=D1109_RS02865;product=uroporphyrinogen-III synthase;protein_id=WP_005608224.1;transl_table=11 NZ_CP031858.1 RefSeq gene 617261 618190 . - . ID=gene-D1109_RS02870;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=D1109_RS02870;old_locus_tag=D1109_02870 NZ_CP031858.1 Protein Homology CDS 617261 618190 . - 0 ID=cds-WP_043877980.1;Parent=gene-D1109_RS02870;Dbxref=Genbank:WP_043877980.1;Name=WP_043877980.1;Ontology_term=GO:0006779,GO:0004418;gbkey=CDS;gene=hemC;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011848513.1;locus_tag=D1109_RS02870;product=hydroxymethylbilane synthase;protein_id=WP_043877980.1;transl_table=11 NZ_CP031858.1 RefSeq gene 618459 621074 . + . ID=gene-D1109_RS02875;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=protein_coding;gene_synonym=adhC;locus_tag=D1109_RS02875;old_locus_tag=D1109_02875 NZ_CP031858.1 Protein Homology CDS 618459 621074 . + 0 ID=cds-WP_005615360.1;Parent=gene-D1109_RS02875;Dbxref=Genbank:WP_005615360.1;Name=WP_005615360.1;Ontology_term=GO:0006066,GO:0015976,GO:0004022,GO:0016620,GO:0046872;gbkey=CDS;gene=adhE;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,metal ion binding|0046872||IEA;go_process=alcohol metabolic process|0006066||IEA,carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874826.1;locus_tag=D1109_RS02875;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=WP_005615360.1;transl_table=11 NZ_CP031858.1 RefSeq gene 621248 622891 . - . ID=gene-D1109_RS02880;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=D1109_RS02880;old_locus_tag=D1109_02880 NZ_CP031858.1 Protein Homology CDS 621248 622891 . - 0 ID=cds-WP_009874825.1;Parent=gene-D1109_RS02880;Dbxref=Genbank:WP_009874825.1;Name=WP_009874825.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0006457,GO:0005515,GO:0016887;gbkey=CDS;gene=groL;go_function=protein binding|0005515||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011608625.1;locus_tag=D1109_RS02880;product=chaperonin GroEL;protein_id=WP_009874825.1;transl_table=11 NZ_CP031858.1 RefSeq gene 622951 623241 . - . ID=gene-D1109_RS02885;Name=D1109_RS02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02885;old_locus_tag=D1109_02885 NZ_CP031858.1 Protein Homology CDS 622951 623241 . - 0 ID=cds-WP_005597793.1;Parent=gene-D1109_RS02885;Dbxref=Genbank:WP_005597793.1;Name=WP_005597793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005578164.1;locus_tag=D1109_RS02885;product=co-chaperone GroES;protein_id=WP_005597793.1;transl_table=11 NZ_CP031858.1 RefSeq gene 623453 624175 . - . ID=gene-D1109_RS02890;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=D1109_RS02890;old_locus_tag=D1109_02890 NZ_CP031858.1 Protein Homology CDS 623453 624175 . - 0 ID=cds-WP_005597795.1;Parent=gene-D1109_RS02890;Dbxref=Genbank:WP_005597795.1;Name=WP_005597795.1;Ontology_term=GO:0043096,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=purine nucleobase salvage|0043096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005613957.1;locus_tag=D1109_RS02890;product=purine-nucleoside phosphorylase;protein_id=WP_005597795.1;transl_table=11 NZ_CP031858.1 RefSeq gene 624234 625010 . - . ID=gene-D1109_RS02895;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=D1109_RS02895;old_locus_tag=D1109_02895 NZ_CP031858.1 Protein Homology CDS 624234 625010 . - 0 ID=cds-WP_005597797.1;Parent=gene-D1109_RS02895;Dbxref=Genbank:WP_005597797.1;Name=WP_005597797.1;Ontology_term=GO:0009264,GO:0004139;gbkey=CDS;gene=deoC;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991058.1;locus_tag=D1109_RS02895;product=deoxyribose-phosphate aldolase;protein_id=WP_005597797.1;transl_table=11 NZ_CP031858.1 RefSeq gene 625147 626415 . - . ID=gene-D1109_RS02900;Name=D1109_RS02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02900;old_locus_tag=D1109_02900 NZ_CP031858.1 Protein Homology CDS 625147 626415 . - 0 ID=cds-WP_005610291.1;Parent=gene-D1109_RS02900;Dbxref=Genbank:WP_005610291.1;Name=WP_005610291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010944823.1;locus_tag=D1109_RS02900;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_005610291.1;transl_table=11 NZ_CP031858.1 RefSeq gene 626628 627272 . + . ID=gene-D1109_RS02905;Name=D1109_RS02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02905;old_locus_tag=D1109_02905 NZ_CP031858.1 Protein Homology CDS 626628 627272 . + 0 ID=cds-WP_005597799.1;Parent=gene-D1109_RS02905;Dbxref=Genbank:WP_005597799.1;Name=WP_005597799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597799.1;locus_tag=D1109_RS02905;product=membrane protein;protein_id=WP_005597799.1;transl_table=11 NZ_CP031858.1 RefSeq gene 627324 627965 . - . ID=gene-D1109_RS02910;Name=D1109_RS02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02910;old_locus_tag=D1109_02910 NZ_CP031858.1 Protein Homology CDS 627324 627965 . - 0 ID=cds-WP_215578015.1;Parent=gene-D1109_RS02910;Dbxref=Genbank:WP_215578015.1;Name=WP_215578015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017357745.1;locus_tag=D1109_RS02910;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_215578015.1;transl_table=11 NZ_CP031858.1 RefSeq gene 627980 628924 . - . ID=gene-D1109_RS02915;Name=D1109_RS02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02915;old_locus_tag=D1109_02915 NZ_CP031858.1 Protein Homology CDS 627980 628924 . - 0 ID=cds-WP_215578009.1;Parent=gene-D1109_RS02915;Dbxref=Genbank:WP_215578009.1;Name=WP_215578009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005619748.1;locus_tag=D1109_RS02915;product=sugar kinase;protein_id=WP_215578009.1;transl_table=11 NZ_CP031858.1 RefSeq gene 628937 629527 . - . ID=gene-D1109_RS02920;Name=D1109_RS02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02920;old_locus_tag=D1109_02920 NZ_CP031858.1 Protein Homology CDS 628937 629527 . - 0 ID=cds-WP_237611358.1;Parent=gene-D1109_RS02920;Dbxref=Genbank:WP_237611358.1;Name=WP_237611358.1;Ontology_term=GO:0006064;gbkey=CDS;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005601469.1;locus_tag=D1109_RS02920;product=glucuronate isomerase;protein_id=WP_237611358.1;transl_table=11 NZ_CP031858.1 RefSeq pseudogene 629524 631310 . + . ID=gene-D1109_RS02925;Name=D1109_RS02925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D1109_RS02925;old_locus_tag=D1109_02925;partial=true;pseudo=true;start_range=.,629524 NZ_CP031858.1 Protein Homology CDS 629524 631310 . + 0 ID=cds-D1109_RS02925;Parent=gene-D1109_RS02925;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651672.1;locus_tag=D1109_RS02925;partial=true;product=DUF5110 domain-containing protein;pseudo=true;start_range=.,629524;transl_table=11 NZ_CP031858.1 RefSeq gene 631314 631550 . + . ID=gene-D1109_RS02930;Name=D1109_RS02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02930;old_locus_tag=D1109_02930 NZ_CP031858.1 Protein Homology CDS 631314 631550 . + 0 ID=cds-WP_237611359.1;Parent=gene-D1109_RS02930;Dbxref=Genbank:WP_237611359.1;Name=WP_237611359.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597804.1;locus_tag=D1109_RS02930;product=GntR family transcriptional regulator;protein_id=WP_237611359.1;transl_table=11 NZ_CP031858.1 RefSeq gene 631525 631953 . + . ID=gene-D1109_RS02935;Name=D1109_RS02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02935;old_locus_tag=D1109_02935 NZ_CP031858.1 Protein Homology CDS 631525 631953 . + 0 ID=cds-WP_012263065.1;Parent=gene-D1109_RS02935;Dbxref=Genbank:WP_012263065.1;Name=WP_012263065.1;Ontology_term=GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597805.1;locus_tag=D1109_RS02935;product=EamA family transporter;protein_id=WP_012263065.1;transl_table=11 NZ_CP031858.1 RefSeq gene 632197 632703 . + . ID=gene-D1109_RS02940;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=D1109_RS02940;old_locus_tag=D1109_02940 NZ_CP031858.1 Protein Homology CDS 632197 632703 . + 0 ID=cds-WP_005619749.1;Parent=gene-D1109_RS02940;Dbxref=Genbank:WP_005619749.1;Name=WP_005619749.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005619749.1;locus_tag=D1109_RS02940;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_005619749.1;transl_table=11 NZ_CP031858.1 RefSeq gene 632739 633539 . - . ID=gene-D1109_RS02945;Name=D1109_RS02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02945;old_locus_tag=D1109_02945 NZ_CP031858.1 Protein Homology CDS 632739 633539 . - 0 ID=cds-WP_005597807.1;Parent=gene-D1109_RS02945;Dbxref=Genbank:WP_005597807.1;Name=WP_005597807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_162680708.1;locus_tag=D1109_RS02945;product=glycosyltransferase;protein_id=WP_005597807.1;transl_table=11 NZ_CP031858.1 RefSeq gene 633539 634420 . - . ID=gene-D1109_RS02950;Name=D1109_RS02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02950;old_locus_tag=D1109_02950 NZ_CP031858.1 Protein Homology CDS 633539 634420 . - 0 ID=cds-WP_005601476.1;Parent=gene-D1109_RS02950;Dbxref=Genbank:WP_005601476.1;Name=WP_005601476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263066.1;locus_tag=D1109_RS02950;product=glycosyltransferase family 2 protein;protein_id=WP_005601476.1;transl_table=11 NZ_CP031858.1 RefSeq gene 634413 635612 . - . ID=gene-D1109_RS02955;Name=D1109_RS02955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02955;old_locus_tag=D1109_02955 NZ_CP031858.1 Protein Homology CDS 634413 635612 . - 0 ID=cds-WP_237611360.1;Parent=gene-D1109_RS02955;Dbxref=Genbank:WP_237611360.1;Name=WP_237611360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874815.1;locus_tag=D1109_RS02955;product=hypothetical protein;protein_id=WP_237611360.1;transl_table=11 NZ_CP031858.1 RefSeq gene 635613 636383 . - . ID=gene-D1109_RS02960;Name=D1109_RS02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02960;old_locus_tag=D1109_02960 NZ_CP031858.1 Protein Homology CDS 635613 636383 . - 0 ID=cds-WP_237611361.1;Parent=gene-D1109_RS02960;Dbxref=Genbank:WP_237611361.1;Name=WP_237611361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005608235.1;locus_tag=D1109_RS02960;product=glycosyltransferase family 25 protein;protein_id=WP_237611361.1;transl_table=11 NZ_CP031858.1 RefSeq gene 636380 637588 . - . ID=gene-D1109_RS02965;Name=D1109_RS02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02965;old_locus_tag=D1109_02965 NZ_CP031858.1 Protein Homology CDS 636380 637588 . - 0 ID=cds-WP_005604749.1;Parent=gene-D1109_RS02965;Dbxref=Genbank:WP_005604749.1;Name=WP_005604749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005615380.1;locus_tag=D1109_RS02965;product=membrane protein;protein_id=WP_005604749.1;transl_table=11 NZ_CP031858.1 RefSeq gene 637566 638531 . - . ID=gene-D1109_RS02970;Name=D1109_RS02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02970;old_locus_tag=D1109_02970 NZ_CP031858.1 Protein Homology CDS 637566 638531 . - 0 ID=cds-WP_237611362.1;Parent=gene-D1109_RS02970;Dbxref=Genbank:WP_237611362.1;Name=WP_237611362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005601480.1;locus_tag=D1109_RS02970;product=polysaccharide pyruvyl transferase family protein;protein_id=WP_237611362.1;transl_table=11 NZ_CP031858.1 RefSeq gene 638687 639427 . + . ID=gene-D1109_RS02975;Name=D1109_RS02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02975;old_locus_tag=D1109_02975 NZ_CP031858.1 Protein Homology CDS 638687 639427 . + 0 ID=cds-WP_237593669.1;Parent=gene-D1109_RS02975;Dbxref=Genbank:WP_237593669.1;Name=WP_237593669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005615381.1;locus_tag=D1109_RS02975;product=YdcF family protein;protein_id=WP_237593669.1;transl_table=11 NZ_CP031858.1 RefSeq gene 639507 641723 . - . ID=gene-D1109_RS02980;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=D1109_RS02980;old_locus_tag=D1109_02980 NZ_CP031858.1 Protein Homology CDS 639507 641723 . - 0 ID=cds-WP_237611363.1;Parent=gene-D1109_RS02980;Dbxref=Genbank:WP_237611363.1;Name=WP_237611363.1;gbkey=CDS;gene=priA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005624357.1;locus_tag=D1109_RS02980;product=primosomal protein N';protein_id=WP_237611363.1;transl_table=11 NZ_CP031858.1 RefSeq gene 641808 642965 . - . ID=gene-D1109_RS02985;Name=D1109_RS02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS02985;old_locus_tag=D1109_02985 NZ_CP031858.1 Protein Homology CDS 641808 642965 . - 0 ID=cds-WP_009874813.1;Parent=gene-D1109_RS02985;Dbxref=Genbank:WP_009874813.1;Name=WP_009874813.1;Ontology_term=GO:0009095,GO:0004106;gbkey=CDS;go_function=chorismate mutase activity|0004106||IEA;go_process=aromatic amino acid family biosynthetic process%2C prephenate pathway|0009095||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991031.1;locus_tag=D1109_RS02985;product=chorismate mutase;protein_id=WP_009874813.1;transl_table=11 NZ_CP031858.1 RefSeq gene 643088 645121 . - . ID=gene-D1109_RS02990;Name=prlC;gbkey=Gene;gene=prlC;gene_biotype=protein_coding;locus_tag=D1109_RS02990;old_locus_tag=D1109_02990 NZ_CP031858.1 Protein Homology CDS 643088 645121 . - 0 ID=cds-WP_237585744.1;Parent=gene-D1109_RS02990;Dbxref=Genbank:WP_237585744.1;Name=WP_237585744.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=prlC;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874812.1;locus_tag=D1109_RS02990;product=oligopeptidase A;protein_id=WP_237585744.1;transl_table=11 NZ_CP031858.1 RefSeq gene 645264 646001 . - . ID=gene-D1109_RS02995;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=D1109_RS02995;old_locus_tag=D1109_02995 NZ_CP031858.1 Protein Homology CDS 645264 646001 . - 0 ID=cds-WP_237585745.1;Parent=gene-D1109_RS02995;Dbxref=Genbank:WP_237585745.1;Name=WP_237585745.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604771.1;locus_tag=D1109_RS02995;product=pyruvate formate lyase 1-activating protein;protein_id=WP_237585745.1;transl_table=11 NZ_CP031858.1 RefSeq gene 646128 648440 . - . ID=gene-D1109_RS03000;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=D1109_RS03000;old_locus_tag=D1109_03000 NZ_CP031858.1 Protein Homology CDS 646128 648440 . - 0 ID=cds-WP_005597831.1;Parent=gene-D1109_RS03000;Dbxref=Genbank:WP_005597831.1;Name=WP_005597831.1;Ontology_term=GO:0006113,GO:0015942,GO:0008861;gbkey=CDS;gene=pflB;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=fermentation|0006113||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005601494.1;locus_tag=D1109_RS03000;product=formate C-acetyltransferase;protein_id=WP_005597831.1;transl_table=11 NZ_CP031858.1 RefSeq gene 648533 649357 . - . ID=gene-D1109_RS03005;Name=focA;gbkey=Gene;gene=focA;gene_biotype=protein_coding;locus_tag=D1109_RS03005;old_locus_tag=D1109_03005 NZ_CP031858.1 Protein Homology CDS 648533 649357 . - 0 ID=cds-WP_009874811.1;Parent=gene-D1109_RS03005;Dbxref=Genbank:WP_009874811.1;Name=WP_009874811.1;Ontology_term=GO:0015724,GO:0015499,GO:0005887;gbkey=CDS;gene=focA;go_component=integral component of plasma membrane|0005887||IEA;go_function=formate transmembrane transporter activity|0015499||IEA;go_process=formate transport|0015724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263076.1;locus_tag=D1109_RS03005;product=formate transporter FocA;protein_id=WP_009874811.1;transl_table=11 NZ_CP031858.1 RefSeq gene 649561 650043 . + . ID=gene-D1109_RS03010;Name=D1109_RS03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03010;old_locus_tag=D1109_03010 NZ_CP031858.1 Protein Homology CDS 649561 650043 . + 0 ID=cds-WP_237611364.1;Parent=gene-D1109_RS03010;Dbxref=Genbank:WP_237611364.1;Name=WP_237611364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005612412.1;locus_tag=D1109_RS03010;product=DedA family protein;protein_id=WP_237611364.1;transl_table=11 NZ_CP031858.1 RefSeq gene 650115 650984 . - . ID=gene-D1109_RS03015;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=D1109_RS03015;old_locus_tag=D1109_03015 NZ_CP031858.1 Protein Homology CDS 650115 650984 . - 0 ID=cds-WP_237611365.1;Parent=gene-D1109_RS03015;Dbxref=Genbank:WP_237611365.1;Name=WP_237611365.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604779.1;locus_tag=D1109_RS03015;product=protease HtpX;protein_id=WP_237611365.1;transl_table=11 NZ_CP031858.1 RefSeq gene 651072 652142 . - . ID=gene-D1109_RS03020;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=D1109_RS03020;old_locus_tag=D1109_03020 NZ_CP031858.1 Protein Homology CDS 651072 652142 . - 0 ID=cds-WP_237611366.1;Parent=gene-D1109_RS03020;Dbxref=Genbank:WP_237611366.1;Name=WP_237611366.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005619753.1;locus_tag=D1109_RS03020;product=DNA polymerase IV;protein_id=WP_237611366.1;transl_table=11 NZ_CP031858.1 RefSeq gene 652249 653157 . + . ID=gene-D1109_RS03025;Name=D1109_RS03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03025;old_locus_tag=D1109_03025 NZ_CP031858.1 Protein Homology CDS 652249 653157 . + 0 ID=cds-WP_237611367.1;Parent=gene-D1109_RS03025;Dbxref=Genbank:WP_237611367.1;Name=WP_237611367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991039.1;locus_tag=D1109_RS03025;product=lysine exporter LysO family protein;protein_id=WP_237611367.1;transl_table=11 NZ_CP031858.1 RefSeq gene 653196 654476 . - . ID=gene-D1109_RS03030;Name=D1109_RS03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03030;old_locus_tag=D1109_03030 NZ_CP031858.1 Protein Homology CDS 653196 654476 . - 0 ID=cds-WP_005601507.1;Parent=gene-D1109_RS03030;Dbxref=Genbank:WP_005601507.1;Name=WP_005601507.1;Ontology_term=GO:0009234,GO:0008909;gbkey=CDS;go_function=isochorismate synthase activity|0008909||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597842.1;locus_tag=D1109_RS03030;product=isochorismate synthase;protein_id=WP_005601507.1;transl_table=11 NZ_CP031858.1 RefSeq gene 654640 655857 . + . ID=gene-D1109_RS03035;Name=D1109_RS03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03035;old_locus_tag=D1109_03035 NZ_CP031858.1 Protein Homology CDS 654640 655857 . + 0 ID=cds-WP_237611368.1;Parent=gene-D1109_RS03035;Dbxref=Genbank:WP_237611368.1;Name=WP_237611368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005612427.1;locus_tag=D1109_RS03035;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_237611368.1;transl_table=11 NZ_CP031858.1 RefSeq gene 655901 656794 . + . ID=gene-D1109_RS03040;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=D1109_RS03040;old_locus_tag=D1109_03040 NZ_CP031858.1 Protein Homology CDS 655901 656794 . + 0 ID=cds-WP_005608249.1;Parent=gene-D1109_RS03040;Dbxref=Genbank:WP_005608249.1;Name=WP_005608249.1;Ontology_term=GO:0006810,GO:0005215,GO:0005887;gbkey=CDS;gene=rarD;go_component=integral component of plasma membrane|0005887||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005615395.1;locus_tag=D1109_RS03040;product=EamA family transporter RarD;protein_id=WP_005608249.1;transl_table=11 NZ_CP031858.1 RefSeq gene 656819 657661 . + . ID=gene-D1109_RS03045;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=D1109_RS03045;old_locus_tag=D1109_03045 NZ_CP031858.1 Protein Homology CDS 656819 657661 . + 0 ID=cds-WP_005610343.1;Parent=gene-D1109_RS03045;Dbxref=Genbank:WP_005610343.1;Name=WP_005610343.1;Ontology_term=GO:0006810,GO:0005215,GO:0005887;gbkey=CDS;gene=rarD;go_component=integral component of plasma membrane|0005887||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604788.1;locus_tag=D1109_RS03045;product=EamA family transporter RarD;protein_id=WP_005610343.1;transl_table=11 NZ_CP031858.1 RefSeq gene 657658 658116 . + . ID=gene-D1109_RS03050;Name=D1109_RS03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03050;old_locus_tag=D1109_03050 NZ_CP031858.1 Protein Homology CDS 657658 658116 . + 0 ID=cds-WP_005597850.1;Parent=gene-D1109_RS03050;Dbxref=Genbank:WP_005597850.1;Name=WP_005597850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251812.1;locus_tag=D1109_RS03050;product=LysE family translocator;protein_id=WP_005597850.1;transl_table=11 NZ_CP031858.1 RefSeq gene 658355 661201 . - . ID=gene-D1109_RS03055;Name=D1109_RS03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03055;old_locus_tag=D1109_03055 NZ_CP031858.1 Protein Homology CDS 658355 661201 . - 0 ID=cds-WP_005604793.1;Parent=gene-D1109_RS03055;Dbxref=Genbank:WP_005604793.1;Name=WP_005604793.1;Ontology_term=GO:0006810,GO:0022857,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991030.1;locus_tag=D1109_RS03055;product=TonB-dependent hemoglobin/transferrin/lactoferrin family receptor;protein_id=WP_005604793.1;transl_table=11 NZ_CP031858.1 RefSeq gene 661261 661782 . - . ID=gene-D1109_RS03060;Name=hutZ;gbkey=Gene;gene=hutZ;gene_biotype=protein_coding;locus_tag=D1109_RS03060;old_locus_tag=D1109_03060 NZ_CP031858.1 Protein Homology CDS 661261 661782 . - 0 ID=cds-WP_005597856.1;Parent=gene-D1109_RS03060;Dbxref=Genbank:WP_005597856.1;Name=WP_005597856.1;Ontology_term=GO:0042167,GO:0020037;gbkey=CDS;gene=hutZ;go_function=heme binding|0020037||IEA;go_process=heme catabolic process|0042167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597856.1;locus_tag=D1109_RS03060;product=heme utilization protein HutZ;protein_id=WP_005597856.1;transl_table=11 NZ_CP031858.1 RefSeq gene 661986 662732 . - . ID=gene-D1109_RS03065;Name=D1109_RS03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03065;old_locus_tag=D1109_03065 NZ_CP031858.1 Protein Homology CDS 661986 662732 . - 0 ID=cds-WP_237611369.1;Parent=gene-D1109_RS03065;Dbxref=Genbank:WP_237611369.1;Name=WP_237611369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875224.1;locus_tag=D1109_RS03065;product=cytochrome C biogenesis protein;protein_id=WP_237611369.1;transl_table=11 NZ_CP031858.1 RefSeq gene 662710 663144 . - . ID=gene-D1109_RS03070;Name=nrfF;gbkey=Gene;gene=nrfF;gene_biotype=protein_coding;locus_tag=D1109_RS03070;old_locus_tag=D1109_03070 NZ_CP031858.1 Protein Homology CDS 662710 663144 . - 0 ID=cds-WP_005597860.1;Parent=gene-D1109_RS03070;Dbxref=Genbank:WP_005597860.1;Name=WP_005597860.1;gbkey=CDS;gene=nrfF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597860.1;locus_tag=D1109_RS03070;product=heme lyase NrfEFG subunit NrfF;protein_id=WP_005597860.1;transl_table=11 NZ_CP031858.1 RefSeq gene 663144 663677 . - . ID=gene-D1109_RS03075;Name=D1109_RS03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03075;old_locus_tag=D1109_03075 NZ_CP031858.1 Protein Homology CDS 663144 663677 . - 0 ID=cds-WP_237611370.1;Parent=gene-D1109_RS03075;Dbxref=Genbank:WP_237611370.1;Name=WP_237611370.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604798.1;locus_tag=D1109_RS03075;product=redoxin family protein;protein_id=WP_237611370.1;transl_table=11 NZ_CP031858.1 RefSeq gene 663679 665595 . - . ID=gene-D1109_RS03080;Name=nrfE;gbkey=Gene;gene=nrfE;gene_biotype=protein_coding;locus_tag=D1109_RS03080;old_locus_tag=D1109_03080 NZ_CP031858.1 Protein Homology CDS 663679 665595 . - 0 ID=cds-WP_237594327.1;Parent=gene-D1109_RS03080;Dbxref=Genbank:WP_237594327.1;Name=WP_237594327.1;gbkey=CDS;gene=nrfE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597865.1;locus_tag=D1109_RS03080;product=heme lyase NrfEFG subunit NrfE;protein_id=WP_237594327.1;transl_table=11 NZ_CP031858.1 RefSeq gene 665766 667631 . - . ID=gene-D1109_RS03085;Name=D1109_RS03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03085;old_locus_tag=D1109_03085 NZ_CP031858.1 Protein Homology CDS 665766 667631 . - 0 ID=cds-WP_005601524.1;Parent=gene-D1109_RS03085;Dbxref=Genbank:WP_005601524.1;Name=WP_005601524.1;Ontology_term=GO:0006812,GO:1902600,GO:0005451,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=monovalent cation:proton antiporter activity|0005451||IEA;go_process=cation transport|0006812||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263081.1;locus_tag=D1109_RS03085;product=monovalent cation:proton antiporter-2 (CPA2) family protein;protein_id=WP_005601524.1;transl_table=11 NZ_CP031858.1 RefSeq gene 667720 670248 . - . ID=gene-D1109_RS03090;Name=D1109_RS03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03090;old_locus_tag=D1109_03090 NZ_CP031858.1 Protein Homology CDS 667720 670248 . - 0 ID=cds-WP_237611371.1;Parent=gene-D1109_RS03090;Dbxref=Genbank:WP_237611371.1;Name=WP_237611371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005608256.1;locus_tag=D1109_RS03090;product=class I adenylate cyclase;protein_id=WP_237611371.1;transl_table=11 NZ_CP031858.1 RefSeq gene 670503 671723 . + . ID=gene-D1109_RS03095;Name=fabB;gbkey=Gene;gene=fabB;gene_biotype=protein_coding;locus_tag=D1109_RS03095;old_locus_tag=D1109_03095 NZ_CP031858.1 Protein Homology CDS 670503 671723 . + 0 ID=cds-WP_009875222.1;Parent=gene-D1109_RS03095;Dbxref=Genbank:WP_009875222.1;Name=WP_009875222.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabB;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875222.1;locus_tag=D1109_RS03095;product=beta-ketoacyl-ACP synthase I;protein_id=WP_009875222.1;transl_table=11 NZ_CP031858.1 RefSeq gene 671915 673248 . + . ID=gene-D1109_RS03100;Name=D1109_RS03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03100;old_locus_tag=D1109_03100 NZ_CP031858.1 Protein Homology CDS 671915 672368 . + 0 ID=cds-WP_237611372.1;Parent=gene-D1109_RS03100;Dbxref=Genbank:WP_237611372.1;Name=WP_237611372.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612109.1;locus_tag=D1109_RS03100;product=IS3 family transposase;protein_id=WP_237611372.1;transl_table=11 NZ_CP031858.1 Protein Homology CDS 672368 673248 . + 2 ID=cds-WP_237611372.1;Parent=gene-D1109_RS03100;Dbxref=Genbank:WP_237611372.1;Name=WP_237611372.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612109.1;locus_tag=D1109_RS03100;product=IS3 family transposase;protein_id=WP_237611372.1;transl_table=11 NZ_CP031858.1 RefSeq gene 673395 673742 . + . ID=gene-D1109_RS03105;Name=D1109_RS03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03105;old_locus_tag=D1109_03105 NZ_CP031858.1 Protein Homology CDS 673395 673742 . + 0 ID=cds-WP_005612458.1;Parent=gene-D1109_RS03105;Dbxref=Genbank:WP_005612458.1;Name=WP_005612458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005608263.1;locus_tag=D1109_RS03105;product=NirD/YgiW/YdeI family stress tolerance protein;protein_id=WP_005612458.1;transl_table=11 NZ_CP031858.1 RefSeq gene 673798 674394 . + . ID=gene-D1109_RS03110;Name=D1109_RS03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03110;old_locus_tag=D1109_03110 NZ_CP031858.1 Protein Homology CDS 673798 674394 . + 0 ID=cds-WP_005608264.1;Parent=gene-D1109_RS03110;Dbxref=Genbank:WP_005608264.1;Name=WP_005608264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005612460.1;locus_tag=D1109_RS03110;product=NirD/YgiW/YdeI family stress tolerance protein;protein_id=WP_005608264.1;transl_table=11 NZ_CP031858.1 RefSeq gene 674435 674809 . + . ID=gene-D1109_RS03115;Name=D1109_RS03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03115;old_locus_tag=D1109_03115 NZ_CP031858.1 Protein Homology CDS 674435 674809 . + 0 ID=cds-WP_005615415.1;Parent=gene-D1109_RS03115;Dbxref=Genbank:WP_005615415.1;Name=WP_005615415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991128.1;locus_tag=D1109_RS03115;product=NirD/YgiW/YdeI family stress tolerance protein;protein_id=WP_005615415.1;transl_table=11 NZ_CP031858.1 RefSeq gene 674898 675563 . + . ID=gene-D1109_RS03120;Name=D1109_RS03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03120;old_locus_tag=D1109_03120 NZ_CP031858.1 Protein Homology CDS 674898 675563 . + 0 ID=cds-WP_005619495.1;Parent=gene-D1109_RS03120;Dbxref=Genbank:WP_005619495.1;Name=WP_005619495.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005619495.1;locus_tag=D1109_RS03120;product=response regulator;protein_id=WP_005619495.1;transl_table=11 NZ_CP031858.1 RefSeq gene 675556 676932 . + . ID=gene-D1109_RS03125;Name=D1109_RS03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03125;old_locus_tag=D1109_03125 NZ_CP031858.1 Protein Homology CDS 675556 676932 . + 0 ID=cds-WP_237611373.1;Parent=gene-D1109_RS03125;Dbxref=Genbank:WP_237611373.1;Name=WP_237611373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005613985.1;locus_tag=D1109_RS03125;product=ATP-binding protein;protein_id=WP_237611373.1;transl_table=11 NZ_CP031858.1 RefSeq gene 676980 677540 . - . ID=gene-D1109_RS03130;Name=D1109_RS03130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03130;old_locus_tag=D1109_03130 NZ_CP031858.1 Protein Homology CDS 676980 677540 . - 0 ID=cds-WP_005603079.1;Parent=gene-D1109_RS03130;Dbxref=Genbank:WP_005603079.1;Name=WP_005603079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604815.1;locus_tag=D1109_RS03130;product=YtfJ family protein;protein_id=WP_005603079.1;transl_table=11 NZ_CP031858.1 RefSeq gene 677734 678030 . + . ID=gene-D1109_RS03135;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=D1109_RS03135;old_locus_tag=D1109_03135 NZ_CP031858.1 Protein Homology CDS 677734 678030 . + 0 ID=cds-WP_005597904.1;Parent=gene-D1109_RS03135;Dbxref=Genbank:WP_005597904.1;Name=WP_005597904.1;gbkey=CDS;gene=yajC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597904.1;locus_tag=D1109_RS03135;product=preprotein translocase subunit YajC;protein_id=WP_005597904.1;transl_table=11 NZ_CP031858.1 RefSeq gene 678090 679904 . + . ID=gene-D1109_RS03140;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=D1109_RS03140;old_locus_tag=D1109_03140 NZ_CP031858.1 Protein Homology CDS 678090 679904 . + 0 ID=cds-WP_009875216.1;Parent=gene-D1109_RS03140;Dbxref=Genbank:WP_009875216.1;Name=WP_009875216.1;Ontology_term=GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005617556.1;locus_tag=D1109_RS03140;product=protein translocase subunit SecD;protein_id=WP_009875216.1;transl_table=11 NZ_CP031858.1 RefSeq gene 679915 680889 . + . ID=gene-D1109_RS03145;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=D1109_RS03145;old_locus_tag=D1109_03145 NZ_CP031858.1 Protein Homology CDS 679915 680889 . + 0 ID=cds-WP_005597908.1;Parent=gene-D1109_RS03145;Dbxref=Genbank:WP_005597908.1;Name=WP_005597908.1;Ontology_term=GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991100.1;locus_tag=D1109_RS03145;product=protein translocase subunit SecF;protein_id=WP_005597908.1;transl_table=11 NZ_CP031858.1 RefSeq gene 681036 681542 . + . ID=gene-D1109_RS03150;Name=ftnA;gbkey=Gene;gene=ftnA;gene_biotype=protein_coding;locus_tag=D1109_RS03150;old_locus_tag=D1109_03150 NZ_CP031858.1 Protein Homology CDS 681036 681542 . + 0 ID=cds-WP_009875215.1;Parent=gene-D1109_RS03150;Dbxref=Genbank:WP_009875215.1;Name=WP_009875215.1;Ontology_term=GO:0006879,GO:0008199;gbkey=CDS;gene=ftnA;go_function=ferric iron binding|0008199||IEA;go_process=cellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005619493.1;locus_tag=D1109_RS03150;product=non-heme ferritin;protein_id=WP_009875215.1;transl_table=11 NZ_CP031858.1 RefSeq gene 681542 682039 . + . ID=gene-D1109_RS03155;Name=ftnA;gbkey=Gene;gene=ftnA;gene_biotype=protein_coding;locus_tag=D1109_RS03155;old_locus_tag=D1109_03155 NZ_CP031858.1 Protein Homology CDS 681542 682039 . + 0 ID=cds-WP_005619492.1;Parent=gene-D1109_RS03155;Dbxref=Genbank:WP_005619492.1;Name=WP_005619492.1;Ontology_term=GO:0006879,GO:0008199;gbkey=CDS;gene=ftnA;go_function=ferric iron binding|0008199||IEA;go_process=cellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005619492.1;locus_tag=D1109_RS03155;product=non-heme ferritin;protein_id=WP_005619492.1;transl_table=11 NZ_CP031858.1 RefSeq gene 682279 683580 . + . ID=gene-D1109_RS03160;Name=D1109_RS03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03160;old_locus_tag=D1109_03165 NZ_CP031858.1 Protein Homology CDS 682279 683580 . + 0 ID=cds-WP_011848526.1;Parent=gene-D1109_RS03160;Dbxref=Genbank:WP_011848526.1;Name=WP_011848526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991097.1;locus_tag=D1109_RS03160;product=NCS2 family permease;protein_id=WP_011848526.1;transl_table=11 NZ_CP031858.1 RefSeq gene 683637 684227 . - . ID=gene-D1109_RS03165;Name=D1109_RS03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03165;old_locus_tag=D1109_03170 NZ_CP031858.1 Protein Homology CDS 683637 684227 . - 0 ID=cds-WP_005608276.1;Parent=gene-D1109_RS03165;Dbxref=Genbank:WP_005608276.1;Name=WP_005608276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005603071.1;locus_tag=D1109_RS03165;product=Maf family protein;protein_id=WP_005608276.1;transl_table=11 NZ_CP031858.1 RefSeq gene 684383 684925 . + . ID=gene-D1109_RS03170;Name=D1109_RS03170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03170;old_locus_tag=D1109_03175 NZ_CP031858.1 Protein Homology CDS 684383 684925 . + 0 ID=cds-WP_005608278.1;Parent=gene-D1109_RS03170;Dbxref=Genbank:WP_005608278.1;Name=WP_005608278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604820.1;locus_tag=D1109_RS03170;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_005608278.1;transl_table=11 NZ_CP031858.1 RefSeq gene 685021 686469 . - . ID=gene-D1109_RS03175;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=D1109_RS03175;old_locus_tag=D1109_03180 NZ_CP031858.1 Protein Homology CDS 685021 686469 . - 0 ID=cds-WP_011848527.1;Parent=gene-D1109_RS03175;Dbxref=Genbank:WP_011848527.1;Name=WP_011848527.1;Ontology_term=GO:0006400,GO:0009228,GO:0003824;gbkey=CDS;gene=thiI;go_function=catalytic activity|0003824||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991094.1;locus_tag=D1109_RS03175;product=tRNA 4-thiouridine(8) synthase ThiI;protein_id=WP_011848527.1;transl_table=11 NZ_CP031858.1 RefSeq gene 686656 687954 . - . ID=gene-D1109_RS03180;Name=purA;gbkey=Gene;gene=purA;gene_biotype=protein_coding;locus_tag=D1109_RS03180;old_locus_tag=D1109_03185 NZ_CP031858.1 Protein Homology CDS 686656 687954 . - 0 ID=cds-WP_009875343.1;Parent=gene-D1109_RS03180;Dbxref=Genbank:WP_009875343.1;Name=WP_009875343.1;Ontology_term=GO:0009152,GO:0004019;gbkey=CDS;gene=purA;go_function=adenylosuccinate synthase activity|0004019||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010869263.1;locus_tag=D1109_RS03180;product=adenylosuccinate synthase;protein_id=WP_009875343.1;transl_table=11 NZ_CP031858.1 RefSeq gene 688141 689028 . - . ID=gene-D1109_RS03185;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=D1109_RS03185;old_locus_tag=D1109_03190 NZ_CP031858.1 Protein Homology CDS 688141 689028 . - 0 ID=cds-WP_009875344.1;Parent=gene-D1109_RS03185;Dbxref=Genbank:WP_009875344.1;Name=WP_009875344.1;Ontology_term=GO:0045861,GO:0003674,GO:0030288;gbkey=CDS;gene=hflC;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=molecular_function|0003674||IEA;go_process=negative regulation of proteolysis|0045861||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991092.1;locus_tag=D1109_RS03185;product=protease modulator HflC;protein_id=WP_009875344.1;transl_table=11 NZ_CP031858.1 RefSeq gene 689031 690221 . - . ID=gene-D1109_RS03190;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=D1109_RS03190;old_locus_tag=D1109_03195 NZ_CP031858.1 Protein Homology CDS 689031 690221 . - 0 ID=cds-WP_237611374.1;Parent=gene-D1109_RS03190;Dbxref=Genbank:WP_237611374.1;Name=WP_237611374.1;Ontology_term=GO:0045861,GO:0003674,GO:0030288;gbkey=CDS;gene=hflK;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=molecular_function|0003674||IEA;go_process=negative regulation of proteolysis|0045861||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263089.1;locus_tag=D1109_RS03190;product=FtsH protease activity modulator HflK;protein_id=WP_237611374.1;transl_table=11 NZ_CP031858.1 RefSeq gene 690396 690713 . - . ID=gene-D1109_RS03195;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=D1109_RS03195;old_locus_tag=D1109_03200 NZ_CP031858.1 Protein Homology CDS 690396 690713 . - 0 ID=cds-WP_005597935.1;Parent=gene-D1109_RS03195;Dbxref=Genbank:WP_005597935.1;Name=WP_005597935.1;Ontology_term=GO:0015036;gbkey=CDS;gene=trxA;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005708771.1;locus_tag=D1109_RS03195;product=thioredoxin;protein_id=WP_005597935.1;transl_table=11 NZ_CP031858.1 RefSeq gene 690849 692141 . - . ID=gene-D1109_RS03200;Name=D1109_RS03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03200;old_locus_tag=D1109_03205 NZ_CP031858.1 Protein Homology CDS 690849 692141 . - 0 ID=cds-WP_005597937.1;Parent=gene-D1109_RS03200;Dbxref=Genbank:WP_005597937.1;Name=WP_005597937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991090.1;locus_tag=D1109_RS03200;product=purine permease;protein_id=WP_005597937.1;transl_table=11 NZ_CP031858.1 RefSeq gene 692303 693454 . - . ID=gene-D1109_RS03205;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=D1109_RS03205;old_locus_tag=D1109_03210 NZ_CP031858.1 Protein Homology CDS 692303 693454 . - 0 ID=cds-WP_009875348.1;Parent=gene-D1109_RS03205;Dbxref=Genbank:WP_009875348.1;Name=WP_009875348.1;Ontology_term=GO:0006556,GO:0004478;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005601538.1;locus_tag=D1109_RS03205;product=methionine adenosyltransferase;protein_id=WP_009875348.1;transl_table=11 NZ_CP031858.1 RefSeq gene 693674 694567 . + . ID=gene-D1109_RS03210;Name=D1109_RS03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03210;old_locus_tag=D1109_03215 NZ_CP031858.1 Protein Homology CDS 693674 694567 . + 0 ID=cds-WP_237611375.1;Parent=gene-D1109_RS03210;Dbxref=Genbank:WP_237611375.1;Name=WP_237611375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005612495.1;locus_tag=D1109_RS03210;product=homocysteine S-methyltransferase family protein;protein_id=WP_237611375.1;transl_table=11 NZ_CP031858.1 RefSeq gene 694659 696074 . + . ID=gene-D1109_RS03215;Name=D1109_RS03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03215;old_locus_tag=D1109_03220 NZ_CP031858.1 Protein Homology CDS 694659 696074 . + 0 ID=cds-WP_005597941.1;Parent=gene-D1109_RS03215;Dbxref=Genbank:WP_005597941.1;Name=WP_005597941.1;Ontology_term=GO:0015837,GO:0005275,GO:0005887;gbkey=CDS;go_component=integral component of plasma membrane|0005887||IEA;go_function=amine transmembrane transporter activity|0005275||IEA;go_process=amine transport|0015837||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875350.1;locus_tag=D1109_RS03215;product=basic amino acid/polyamine antiporter;protein_id=WP_005597941.1;transl_table=11 NZ_CP031858.1 RefSeq gene 696170 697576 . + . ID=gene-D1109_RS03220;Name=D1109_RS03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03220;old_locus_tag=D1109_03225 NZ_CP031858.1 Protein Homology CDS 696170 697576 . + 0 ID=cds-WP_005601543.1;Parent=gene-D1109_RS03220;Dbxref=Genbank:WP_005601543.1;Name=WP_005601543.1;Ontology_term=GO:0015837,GO:0005275,GO:0005887;gbkey=CDS;go_component=integral component of plasma membrane|0005887||IEA;go_function=amine transmembrane transporter activity|0005275||IEA;go_process=amine transport|0015837||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005617575.1;locus_tag=D1109_RS03220;product=basic amino acid/polyamine antiporter;protein_id=WP_005601543.1;transl_table=11 NZ_CP031858.1 RefSeq gene 697585 698364 . + . ID=gene-D1109_RS03225;Name=D1109_RS03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03225;old_locus_tag=D1109_03230 NZ_CP031858.1 Protein Homology CDS 697585 698364 . + 0 ID=cds-WP_005612500.1;Parent=gene-D1109_RS03225;Dbxref=Genbank:WP_005612500.1;Name=WP_005612500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875351.1;locus_tag=D1109_RS03225;product=hypothetical protein;protein_id=WP_005612500.1;transl_table=11 NZ_CP031858.1 RefSeq gene 698379 699521 . + . ID=gene-D1109_RS03230;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=D1109_RS03230;old_locus_tag=D1109_03235 NZ_CP031858.1 Protein Homology CDS 698379 699521 . + 0 ID=cds-WP_237611376.1;Parent=gene-D1109_RS03230;Dbxref=Genbank:WP_237611376.1;Name=WP_237611376.1;Ontology_term=GO:0006526,GO:0019213;gbkey=CDS;gene=argE;go_function=deacetylase activity|0019213||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263090.1;locus_tag=D1109_RS03230;product=acetylornithine deacetylase;protein_id=WP_237611376.1;transl_table=11 NZ_CP031858.1 RefSeq gene 699602 700249 . - . ID=gene-D1109_RS03235;Name=D1109_RS03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03235;old_locus_tag=D1109_03240 NZ_CP031858.1 Protein Homology CDS 699602 700249 . - 0 ID=cds-WP_005597946.1;Parent=gene-D1109_RS03235;Dbxref=Genbank:WP_005597946.1;Name=WP_005597946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005608297.1;locus_tag=D1109_RS03235;product=outer membrane beta-barrel protein;protein_id=WP_005597946.1;transl_table=11 NZ_CP031858.1 RefSeq gene 700510 703083 . + . ID=gene-D1109_RS03240;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=D1109_RS03240;old_locus_tag=D1109_03245 NZ_CP031858.1 Protein Homology CDS 700510 703083 . + 0 ID=cds-WP_005608298.1;Parent=gene-D1109_RS03240;Dbxref=Genbank:WP_005608298.1;Name=WP_005608298.1;Ontology_term=GO:0009408,GO:0042026,GO:0005524,GO:0016887;gbkey=CDS;gene=clpB;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017357739.1;locus_tag=D1109_RS03240;product=ATP-dependent chaperone ClpB;protein_id=WP_005608298.1;transl_table=11 NZ_CP031858.1 RefSeq gene 703140 704141 . - . ID=gene-D1109_RS03245;Name=arsB;gbkey=Gene;gene=arsB;gene_biotype=protein_coding;locus_tag=D1109_RS03245;old_locus_tag=D1109_03250 NZ_CP031858.1 Protein Homology CDS 703140 704141 . - 0 ID=cds-WP_005604831.1;Parent=gene-D1109_RS03245;Dbxref=Genbank:WP_005604831.1;Name=WP_005604831.1;Ontology_term=GO:0008490;gbkey=CDS;gene=arsB;go_function=arsenite secondary active transmembrane transporter activity|0008490||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263091.1;locus_tag=D1109_RS03245;product=ACR3 family arsenite efflux transporter;protein_id=WP_005604831.1;transl_table=11 NZ_CP031858.1 RefSeq pseudogene 704153 704557 . - . ID=gene-D1109_RS03250;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=pseudogene;locus_tag=D1109_RS03250;old_locus_tag=D1109_03255;pseudo=true NZ_CP031858.1 Protein Homology CDS 704153 704557 . - 0 ID=cds-D1109_RS03250;Parent=gene-D1109_RS03250;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.%3B internal stop;Ontology_term=GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005608303.1;locus_tag=D1109_RS03250;product=arsenate reductase (glutaredoxin);pseudo=true;transl_table=11 NZ_CP031858.1 RefSeq gene 704617 704931 . - . ID=gene-D1109_RS03255;Name=D1109_RS03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03255;old_locus_tag=D1109_03260 NZ_CP031858.1 Protein Homology CDS 704617 704931 . - 0 ID=cds-WP_005608306.1;Parent=gene-D1109_RS03255;Dbxref=Genbank:WP_005608306.1;Name=WP_005608306.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005608306.1;locus_tag=D1109_RS03255;product=metalloregulator ArsR/SmtB family transcription factor;protein_id=WP_005608306.1;transl_table=11 NZ_CP031858.1 RefSeq gene 705051 706478 . - . ID=gene-D1109_RS03260;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=D1109_RS03260;old_locus_tag=D1109_03265 NZ_CP031858.1 Protein Homology CDS 705051 706478 . - 0 ID=cds-WP_005608308.1;Parent=gene-D1109_RS03260;Dbxref=Genbank:WP_005608308.1;Name=WP_005608308.1;Ontology_term=GO:0006520,GO:0008797;gbkey=CDS;gene=aspA;go_function=aspartate ammonia-lyase activity|0008797||IEA;go_process=cellular amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005608308.1;locus_tag=D1109_RS03260;product=aspartate ammonia-lyase;protein_id=WP_005608308.1;transl_table=11 NZ_CP031858.1 RefSeq gene 706619 706900 . - . ID=gene-D1109_RS03265;Name=D1109_RS03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03265;old_locus_tag=D1109_03270 NZ_CP031858.1 Protein Homology CDS 706619 706900 . - 0 ID=cds-WP_011848529.1;Parent=gene-D1109_RS03265;Dbxref=Genbank:WP_011848529.1;Name=WP_011848529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263093.1;locus_tag=D1109_RS03265;product=DUF1294 domain-containing protein;protein_id=WP_011848529.1;transl_table=11 NZ_CP031858.1 RefSeq gene 706974 708011 . - . ID=gene-D1109_RS03270;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=D1109_RS03270;old_locus_tag=D1109_03275 NZ_CP031858.1 Protein Homology CDS 706974 708011 . - 0 ID=cds-WP_237611377.1;Parent=gene-D1109_RS03270;Dbxref=Genbank:WP_237611377.1;Name=WP_237611377.1;Ontology_term=GO:0006189,GO:0009152,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604834.1;locus_tag=D1109_RS03270;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_237611377.1;transl_table=11 NZ_CP031858.1 RefSeq gene 708226 709359 . + . ID=gene-D1109_RS03275;Name=D1109_RS03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03275;old_locus_tag=D1109_03280 NZ_CP031858.1 Protein Homology CDS 708226 709359 . + 0 ID=cds-WP_005597963.1;Parent=gene-D1109_RS03275;Dbxref=Genbank:WP_005597963.1;Name=WP_005597963.1;Ontology_term=GO:0005975;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005617581.1;locus_tag=D1109_RS03275;product=family 20 glycosylhydrolase;protein_id=WP_005597963.1;transl_table=11 NZ_CP031858.1 RefSeq gene 709507 710175 . + . ID=gene-D1109_RS03280;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=D1109_RS03280;old_locus_tag=D1109_03285 NZ_CP031858.1 Protein Homology CDS 709507 710175 . + 0 ID=cds-WP_237611378.1;Parent=gene-D1109_RS03280;Dbxref=Genbank:WP_237611378.1;Name=WP_237611378.1;Ontology_term=GO:0008616;gbkey=CDS;gene=queC;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005617583.1;locus_tag=D1109_RS03280;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_237611378.1;transl_table=11 NZ_CP031858.1 RefSeq gene 710168 710590 . + . ID=gene-D1109_RS03285;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=D1109_RS03285;old_locus_tag=D1109_03290 NZ_CP031858.1 Protein Homology CDS 710168 710590 . + 0 ID=cds-WP_237611379.1;Parent=gene-D1109_RS03285;Dbxref=Genbank:WP_237611379.1;Name=WP_237611379.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597968.1;locus_tag=D1109_RS03285;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_237611379.1;transl_table=11 NZ_CP031858.1 RefSeq gene 710683 711315 . + . ID=gene-D1109_RS03290;Name=D1109_RS03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03290;old_locus_tag=D1109_03295 NZ_CP031858.1 Protein Homology CDS 710683 711315 . + 0 ID=cds-WP_237593693.1;Parent=gene-D1109_RS03290;Dbxref=Genbank:WP_237593693.1;Name=WP_237593693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005612507.1;locus_tag=D1109_RS03290;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WP_237593693.1;transl_table=11 NZ_CP031858.1 RefSeq gene 711456 712013 . - . ID=gene-D1109_RS03295;Name=D1109_RS03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03295;old_locus_tag=D1109_03300 NZ_CP031858.1 Protein Homology CDS 711456 712013 . - 0 ID=cds-WP_005601559.1;Parent=gene-D1109_RS03295;Dbxref=Genbank:WP_005601559.1;Name=WP_005601559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597972.1;locus_tag=D1109_RS03295;product=hypothetical protein;protein_id=WP_005601559.1;transl_table=11 NZ_CP031858.1 RefSeq gene 712069 712338 . - . ID=gene-D1109_RS03300;Name=D1109_RS03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03300;old_locus_tag=D1109_03305 NZ_CP031858.1 Protein Homology CDS 712069 712338 . - 0 ID=cds-WP_012263095.1;Parent=gene-D1109_RS03300;Dbxref=Genbank:WP_012263095.1;Name=WP_012263095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263095.1;locus_tag=D1109_RS03300;product=hypothetical protein;protein_id=WP_012263095.1;transl_table=11 NZ_CP031858.1 RefSeq gene 712682 714181 . - . ID=gene-D1109_RS03305;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=D1109_RS03305;old_locus_tag=D1109_03310 NZ_CP031858.1 Protein Homology CDS 712682 714181 . - 0 ID=cds-WP_009875402.1;Parent=gene-D1109_RS03305;Dbxref=Genbank:WP_009875402.1;Name=WP_009875402.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepA;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875402.1;locus_tag=D1109_RS03305;product=leucyl aminopeptidase;protein_id=WP_009875402.1;transl_table=11 NZ_CP031858.1 RefSeq gene 714549 715364 . + . ID=gene-D1109_RS03310;Name=D1109_RS03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03310;old_locus_tag=D1109_03315 NZ_CP031858.1 Protein Homology CDS 714549 715364 . + 0 ID=cds-WP_237611380.1;Parent=gene-D1109_RS03310;Dbxref=Genbank:WP_237611380.1;Name=WP_237611380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263097.1;locus_tag=D1109_RS03310;product=hypothetical protein;protein_id=WP_237611380.1;transl_table=11 NZ_CP031858.1 RefSeq gene 715563 716666 . + . ID=gene-D1109_RS03315;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=D1109_RS03315;old_locus_tag=D1109_03320 NZ_CP031858.1 Protein Homology CDS 715563 716666 . + 0 ID=cds-WP_237611381.1;Parent=gene-D1109_RS03315;Dbxref=Genbank:WP_237611381.1;Name=WP_237611381.1;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptF;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005623714.1;locus_tag=D1109_RS03315;product=LPS export ABC transporter permease LptF;protein_id=WP_237611381.1;transl_table=11 NZ_CP031858.1 RefSeq gene 716667 717749 . + . ID=gene-D1109_RS03320;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=D1109_RS03320;old_locus_tag=D1109_03325 NZ_CP031858.1 Protein Homology CDS 716667 717749 . + 0 ID=cds-WP_005601563.1;Parent=gene-D1109_RS03320;Dbxref=Genbank:WP_005601563.1;Name=WP_005601563.1;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptG;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652112.1;locus_tag=D1109_RS03320;product=LPS export ABC transporter permease LptG;protein_id=WP_005601563.1;transl_table=11 NZ_CP031858.1 RefSeq gene 717956 721432 . + . ID=gene-D1109_RS03325;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=D1109_RS03325;old_locus_tag=D1109_03330 NZ_CP031858.1 Protein Homology CDS 717956 721432 . + 0 ID=cds-WP_237611382.1;Parent=gene-D1109_RS03325;Dbxref=Genbank:WP_237611382.1;Name=WP_237611382.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604838.1;locus_tag=D1109_RS03325;product=DNA polymerase III subunit alpha;protein_id=WP_237611382.1;transl_table=11 NZ_CP031858.1 RefSeq gene 722308 723489 . - . ID=gene-D1109_RS03330;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=D1109_RS03330;old_locus_tag=D1109_03335 NZ_CP031858.1 Protein Homology CDS 722308 723489 . - 0 ID=cds-WP_005597983.1;Parent=gene-D1109_RS03330;Dbxref=Genbank:WP_005597983.1;Name=WP_005597983.1;Ontology_term=GO:0009152,GO:0000287,GO:0004644,GO:0005524;gbkey=CDS;gene=purT;go_function=magnesium ion binding|0000287||IEA,phosphoribosylglycinamide formyltransferase activity|0004644||IEA,ATP binding|0005524||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005615456.1;locus_tag=D1109_RS03330;product=formate-dependent phosphoribosylglycinamide formyltransferase;protein_id=WP_005597983.1;transl_table=11 NZ_CP031858.1 RefSeq gene 723612 726086 . - . ID=gene-D1109_RS03335;Name=plsB;gbkey=Gene;gene=plsB;gene_biotype=protein_coding;locus_tag=D1109_RS03335;old_locus_tag=D1109_03340 NZ_CP031858.1 Protein Homology CDS 723612 726086 . - 0 ID=cds-WP_009875486.1;Parent=gene-D1109_RS03335;Dbxref=Genbank:WP_009875486.1;Name=WP_009875486.1;Ontology_term=GO:0008654,GO:0004366;gbkey=CDS;gene=plsB;go_function=glycerol-3-phosphate O-acyltransferase activity|0004366||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005612521.1;locus_tag=D1109_RS03335;product=glycerol-3-phosphate 1-O-acyltransferase PlsB;protein_id=WP_009875486.1;transl_table=11 NZ_CP031858.1 RefSeq gene 726243 726875 . + . ID=gene-D1109_RS03340;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=D1109_RS03340;old_locus_tag=D1109_03345 NZ_CP031858.1 Protein Homology CDS 726243 726875 . + 0 ID=cds-WP_005608326.1;Parent=gene-D1109_RS03340;Dbxref=Genbank:WP_005608326.1;Name=WP_005608326.1;Ontology_term=GO:0006282,GO:0006355,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=regulation of DNA repair|0006282||IEA,regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010944537.1;locus_tag=D1109_RS03340;product=transcriptional repressor LexA;protein_id=WP_005608326.1;transl_table=11 NZ_CP031858.1 RefSeq gene 726935 727615 . + . ID=gene-D1109_RS03345;Name=mutH;gbkey=Gene;gene=mutH;gene_biotype=protein_coding;locus_tag=D1109_RS03345;old_locus_tag=D1109_03350 NZ_CP031858.1 Protein Homology CDS 726935 727615 . + 0 ID=cds-WP_009875487.1;Parent=gene-D1109_RS03345;Dbxref=Genbank:WP_009875487.1;Name=WP_009875487.1;Ontology_term=GO:0006304,GO:0004519;gbkey=CDS;gene=mutH;go_function=endonuclease activity|0004519||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005610420.1;locus_tag=D1109_RS03345;product=DNA mismatch repair endonuclease MutH;protein_id=WP_009875487.1;transl_table=11 NZ_CP031858.1 RefSeq gene 727701 728432 . + . ID=gene-D1109_RS03350;Name=D1109_RS03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03350;old_locus_tag=D1109_03355 NZ_CP031858.1 Protein Homology CDS 727701 728432 . + 0 ID=cds-WP_005597990.1;Parent=gene-D1109_RS03350;Dbxref=Genbank:WP_005597990.1;Name=WP_005597990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604847.1;locus_tag=D1109_RS03350;product=TerC family protein;protein_id=WP_005597990.1;transl_table=11 NZ_CP031858.1 RefSeq gene 728547 729584 . + . ID=gene-D1109_RS03355;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=D1109_RS03355;old_locus_tag=D1109_03360 NZ_CP031858.1 Protein Homology CDS 728547 729584 . + 0 ID=cds-WP_011848533.1;Parent=gene-D1109_RS03355;Dbxref=Genbank:WP_011848533.1;Name=WP_011848533.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=nagZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991895.1;locus_tag=D1109_RS03355;product=beta-N-acetylhexosaminidase;protein_id=WP_011848533.1;transl_table=11 NZ_CP031858.1 RefSeq gene 729665 730840 . + . ID=gene-D1109_RS03360;Name=rlmC;gbkey=Gene;gene=rlmC;gene_biotype=protein_coding;locus_tag=D1109_RS03360;old_locus_tag=D1109_03365 NZ_CP031858.1 Protein Homology CDS 729665 730840 . + 0 ID=cds-WP_237611383.1;Parent=gene-D1109_RS03360;Dbxref=Genbank:WP_237611383.1;Name=WP_237611383.1;Ontology_term=GO:0008649;gbkey=CDS;gene=rlmC;go_function=rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005617603.1;locus_tag=D1109_RS03360;product=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;protein_id=WP_237611383.1;transl_table=11 NZ_CP031858.1 RefSeq gene 731047 732357 . + . ID=gene-D1109_RS03365;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=D1109_RS03365;old_locus_tag=D1109_03370 NZ_CP031858.1 Protein Homology CDS 731047 732357 . + 0 ID=cds-WP_005597992.1;Parent=gene-D1109_RS03365;Dbxref=Genbank:WP_005597992.1;Name=WP_005597992.1;Ontology_term=GO:0006096,GO:0004634;gbkey=CDS;gene=eno;go_function=phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011199438.1;locus_tag=D1109_RS03365;product=phosphopyruvate hydratase;protein_id=WP_005597992.1;transl_table=11 NZ_CP031858.1 RefSeq gene 732433 733062 . + . ID=gene-D1109_RS03370;Name=D1109_RS03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03370;old_locus_tag=D1109_03375 NZ_CP031858.1 Protein Homology CDS 732433 733062 . + 0 ID=cds-WP_005597993.1;Parent=gene-D1109_RS03370;Dbxref=Genbank:WP_005597993.1;Name=WP_005597993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875491.1;locus_tag=D1109_RS03370;product=NUDIX hydrolase;protein_id=WP_005597993.1;transl_table=11 NZ_CP031858.1 RefSeq gene 733076 733486 . + . ID=gene-D1109_RS03375;Name=D1109_RS03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03375;old_locus_tag=D1109_03380 NZ_CP031858.1 Protein Homology CDS 733076 733486 . + 0 ID=cds-WP_005597994.1;Parent=gene-D1109_RS03375;Dbxref=Genbank:WP_005597994.1;Name=WP_005597994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005625316.1;locus_tag=D1109_RS03375;product=DUF2251 domain-containing protein;protein_id=WP_005597994.1;transl_table=11 NZ_CP031858.1 RefSeq gene 733545 735353 . - . ID=gene-D1109_RS03380;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=D1109_RS03380;old_locus_tag=D1109_03385 NZ_CP031858.1 Protein Homology CDS 733545 735353 . - 0 ID=cds-WP_005597995.1;Parent=gene-D1109_RS03380;Dbxref=Genbank:WP_005597995.1;Name=WP_005597995.1;Ontology_term=GO:0006310,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263107.1;locus_tag=D1109_RS03380;product=ATP-dependent DNA helicase RecQ;protein_id=WP_005597995.1;transl_table=11 NZ_CP031858.1 RefSeq gene 735438 735743 . - . ID=gene-D1109_RS03385;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=D1109_RS03385;old_locus_tag=D1109_03390 NZ_CP031858.1 Protein Homology CDS 735438 735743 . - 0 ID=cds-WP_237611384.1;Parent=gene-D1109_RS03385;Dbxref=Genbank:WP_237611384.1;Name=WP_237611384.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=cyaY;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005612534.1;locus_tag=D1109_RS03385;product=iron donor protein CyaY;protein_id=WP_237611384.1;transl_table=11 NZ_CP031858.1 RefSeq pseudogene 735752 736459 . - . ID=gene-D1109_RS03390;Name=D1109_RS03390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D1109_RS03390;old_locus_tag=D1109_03395;pseudo=true NZ_CP031858.1 Protein Homology CDS 735752 736459 . - 0 ID=cds-D1109_RS03390;Parent=gene-D1109_RS03390;Note=internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013882.2;locus_tag=D1109_RS03390;product=glycosyltransferase family 25 protein;pseudo=true;transl_table=11 NZ_CP031858.1 RefSeq gene 736569 737612 . - . ID=gene-D1109_RS03395;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=D1109_RS03395;old_locus_tag=D1109_03405 NZ_CP031858.1 Protein Homology CDS 736569 737612 . - 0 ID=cds-WP_005598001.1;Parent=gene-D1109_RS03395;Dbxref=Genbank:WP_005598001.1;Name=WP_005598001.1;Ontology_term=GO:0006400;gbkey=CDS;gene=tsaD;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598001.1;locus_tag=D1109_RS03395;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_005598001.1;transl_table=11 NZ_CP031858.1 RefSeq gene 737704 738480 . - . ID=gene-D1109_RS03400;Name=D1109_RS03400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03400;old_locus_tag=D1109_03410 NZ_CP031858.1 Protein Homology CDS 737704 738480 . - 0 ID=cds-WP_005598002.1;Parent=gene-D1109_RS03400;Dbxref=Genbank:WP_005598002.1;Name=WP_005598002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005617608.1;locus_tag=D1109_RS03400;product=outer membrane protein assembly factor BamD;protein_id=WP_005598002.1;transl_table=11 NZ_CP031858.1 RefSeq gene 738633 739610 . + . ID=gene-D1109_RS03405;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=D1109_RS03405;old_locus_tag=D1109_03415 NZ_CP031858.1 Protein Homology CDS 738633 739610 . + 0 ID=cds-WP_005598003.1;Parent=gene-D1109_RS03405;Dbxref=Genbank:WP_005598003.1;Name=WP_005598003.1;Ontology_term=GO:0001522,GO:0009451,GO:0009982;gbkey=CDS;gene=rluD;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652666.1;locus_tag=D1109_RS03405;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;protein_id=WP_005598003.1;transl_table=11 NZ_CP031858.1 RefSeq gene 739654 740367 . - . ID=gene-D1109_RS03410;Name=D1109_RS03410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03410;old_locus_tag=D1109_03420 NZ_CP031858.1 Protein Homology CDS 739654 740367 . - 0 ID=cds-WP_005601594.1;Parent=gene-D1109_RS03410;Dbxref=Genbank:WP_005601594.1;Name=WP_005601594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604857.1;locus_tag=D1109_RS03410;product=YwiC-like family protein;protein_id=WP_005601594.1;transl_table=11 NZ_CP031858.1 RefSeq gene 740426 741400 . - . ID=gene-D1109_RS03415;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=D1109_RS03415;old_locus_tag=D1109_03425 NZ_CP031858.1 Protein Homology CDS 740426 741400 . - 0 ID=cds-WP_005598005.1;Parent=gene-D1109_RS03415;Dbxref=Genbank:WP_005598005.1;Name=WP_005598005.1;Ontology_term=GO:0006096;gbkey=CDS;gene=pfkA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007523004.1;locus_tag=D1109_RS03415;product=6-phosphofructokinase;protein_id=WP_005598005.1;transl_table=11 NZ_CP031858.1 RefSeq gene 741510 742712 . - . ID=gene-D1109_RS03420;Name=D1109_RS03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03420;old_locus_tag=D1109_03430 NZ_CP031858.1 Protein Homology CDS 741510 742712 . - 0 ID=cds-WP_237611385.1;Parent=gene-D1109_RS03420;Dbxref=Genbank:WP_237611385.1;Name=WP_237611385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005617611.1;locus_tag=D1109_RS03420;product=cysteine desulfurase;protein_id=WP_237611385.1;transl_table=11 NZ_CP031858.1 RefSeq gene 742712 743410 . - . ID=gene-D1109_RS03425;Name=D1109_RS03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03425;old_locus_tag=D1109_03435 NZ_CP031858.1 Protein Homology CDS 742712 743410 . - 0 ID=cds-WP_005601598.1;Parent=gene-D1109_RS03425;Dbxref=Genbank:WP_005601598.1;Name=WP_005601598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005615465.1;locus_tag=D1109_RS03425;product=thermonuclease family protein;protein_id=WP_005601598.1;transl_table=11 NZ_CP031858.1 RefSeq gene 743476 744843 . - . ID=gene-D1109_RS03430;Name=D1109_RS03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03430;old_locus_tag=D1109_03440 NZ_CP031858.1 Protein Homology CDS 743476 744843 . - 0 ID=cds-WP_005601600.1;Parent=gene-D1109_RS03430;Dbxref=Genbank:WP_005601600.1;Name=WP_005601600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263108.1;locus_tag=D1109_RS03430;product=sodium:alanine symporter family protein;protein_id=WP_005601600.1;transl_table=11 NZ_CP031858.1 cmsearch riboswitch 744952 745058 . - . ID=id-NZ_CP031858.1:744952..745058;Dbxref=RFAM:RF00504;Note=glycine riboswitch;bound_moiety=glycine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP031858.1 RefSeq gene 745309 746361 . - . ID=gene-D1109_RS03435;Name=D1109_RS03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03435;old_locus_tag=D1109_03445 NZ_CP031858.1 Protein Homology CDS 745309 746361 . - 0 ID=cds-WP_215577885.1;Parent=gene-D1109_RS03435;Dbxref=Genbank:WP_215577885.1;Name=WP_215577885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005612545.1;locus_tag=D1109_RS03435;product=AI-2E family transporter;protein_id=WP_215577885.1;transl_table=11 NZ_CP031858.1 RefSeq gene 746455 746829 . - . ID=gene-D1109_RS03440;Name=D1109_RS03440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03440;old_locus_tag=D1109_03450 NZ_CP031858.1 Protein Homology CDS 746455 746829 . - 0 ID=cds-WP_005601602.1;Parent=gene-D1109_RS03440;Dbxref=Genbank:WP_005601602.1;Name=WP_005601602.1;Ontology_term=GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005612547.1;locus_tag=D1109_RS03440;product=cytochrome b562;protein_id=WP_005601602.1;transl_table=11 NZ_CP031858.1 RefSeq gene 746978 748375 . + . ID=gene-D1109_RS03445;Name=yegQ;gbkey=Gene;gene=yegQ;gene_biotype=protein_coding;locus_tag=D1109_RS03445;old_locus_tag=D1109_03455 NZ_CP031858.1 Protein Homology CDS 746978 748375 . + 0 ID=cds-WP_237611386.1;Parent=gene-D1109_RS03445;Dbxref=Genbank:WP_237611386.1;Name=WP_237611386.1;gbkey=CDS;gene=yegQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991913.1;locus_tag=D1109_RS03445;product=tRNA 5-hydroxyuridine modification protein YegQ;protein_id=WP_237611386.1;transl_table=11 NZ_CP031858.1 RefSeq gene 748622 749869 . + . ID=gene-D1109_RS03450;Name=D1109_RS03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03450;old_locus_tag=D1109_03460 NZ_CP031858.1 Protein Homology CDS 748622 749869 . + 0 ID=cds-WP_005617612.1;Parent=gene-D1109_RS03450;Dbxref=Genbank:WP_005617612.1;Name=WP_005617612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005608345.1;locus_tag=D1109_RS03450;product=O-antigen ligase family protein;protein_id=WP_005617612.1;transl_table=11 NZ_CP031858.1 RefSeq gene 749869 751149 . + . ID=gene-D1109_RS03455;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=D1109_RS03455;old_locus_tag=D1109_03465 NZ_CP031858.1 Protein Homology CDS 749869 751149 . + 0 ID=cds-WP_237611491.1;Parent=gene-D1109_RS03455;Dbxref=Genbank:WP_237611491.1;Name=WP_237611491.1;gbkey=CDS;gene=waaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875356.1;locus_tag=D1109_RS03455;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_237611491.1;transl_table=11 NZ_CP031858.1 RefSeq gene 751151 751627 . + . ID=gene-D1109_RS03460;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=D1109_RS03460;old_locus_tag=D1109_03470 NZ_CP031858.1 Protein Homology CDS 751151 751627 . + 0 ID=cds-WP_005598022.1;Parent=gene-D1109_RS03460;Dbxref=Genbank:WP_005598022.1;Name=WP_005598022.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991916.1;locus_tag=D1109_RS03460;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_005598022.1;transl_table=11 NZ_CP031858.1 RefSeq gene 751630 752184 . + . ID=gene-D1109_RS03465;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=D1109_RS03465;old_locus_tag=D1109_03475 NZ_CP031858.1 Protein Homology CDS 751630 752184 . + 0 ID=cds-WP_005598024.1;Parent=gene-D1109_RS03465;Dbxref=Genbank:WP_005598024.1;Name=WP_005598024.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-exoribonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598024.1;locus_tag=D1109_RS03465;product=oligoribonuclease;protein_id=WP_005598024.1;transl_table=11 NZ_CP031858.1 RefSeq gene 752192 752683 . + . ID=gene-D1109_RS03470;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=D1109_RS03470;old_locus_tag=D1109_03480 NZ_CP031858.1 Protein Homology CDS 752192 752683 . + 0 ID=cds-WP_005598026.1;Parent=gene-D1109_RS03470;Dbxref=Genbank:WP_005598026.1;Name=WP_005598026.1;Ontology_term=GO:0006400,GO:0016887;gbkey=CDS;gene=tsaE;go_function=ATP hydrolysis activity|0016887||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598026.1;locus_tag=D1109_RS03470;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_005598026.1;transl_table=11 NZ_CP031858.1 RefSeq gene 752707 753852 . + . ID=gene-D1109_RS03475;Name=D1109_RS03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03475;old_locus_tag=D1109_03485 NZ_CP031858.1 Protein Homology CDS 752707 753852 . + 0 ID=cds-WP_005619444.1;Parent=gene-D1109_RS03475;Dbxref=Genbank:WP_005619444.1;Name=WP_005619444.1;Ontology_term=GO:0009253;gbkey=CDS;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012478496.1;locus_tag=D1109_RS03475;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_005619444.1;transl_table=11 NZ_CP031858.1 RefSeq gene 753931 755571 . - . ID=gene-D1109_RS03480;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=D1109_RS03480;old_locus_tag=D1109_03490 NZ_CP031858.1 Protein Homology CDS 753931 755571 . - 0 ID=cds-WP_005601615.1;Parent=gene-D1109_RS03480;Dbxref=Genbank:WP_005601615.1;Name=WP_005601615.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013527751.1;locus_tag=D1109_RS03480;product=glucose-6-phosphate isomerase;protein_id=WP_005601615.1;transl_table=11 NZ_CP031858.1 RefSeq gene 755608 755859 . - . ID=gene-D1109_RS03485;Name=D1109_RS03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03485;old_locus_tag=D1109_03495 NZ_CP031858.1 Protein Homology CDS 755608 755859 . - 0 ID=cds-WP_237611387.1;Parent=gene-D1109_RS03485;Dbxref=Genbank:WP_237611387.1;Name=WP_237611387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005615476.1;locus_tag=D1109_RS03485;product=accessory factor UbiK family protein;protein_id=WP_237611387.1;transl_table=11 NZ_CP031858.1 RefSeq gene 755985 756059 . - . ID=gene-D1109_RS03490;Name=D1109_RS03490;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS03490;old_locus_tag=D1109_03500 NZ_CP031858.1 tRNAscan-SE tRNA 755985 756059 . - . ID=rna-D1109_RS03490;Parent=gene-D1109_RS03490;anticodon=(pos:complement(756025..756027));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS03490;product=tRNA-Gln NZ_CP031858.1 tRNAscan-SE exon 755985 756059 . - . ID=exon-D1109_RS03490-1;Parent=rna-D1109_RS03490;anticodon=(pos:complement(756025..756027));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS03490;product=tRNA-Gln NZ_CP031858.1 RefSeq gene 756108 756182 . - . ID=gene-D1109_RS03495;Name=D1109_RS03495;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS03495;old_locus_tag=D1109_03505 NZ_CP031858.1 tRNAscan-SE tRNA 756108 756182 . - . ID=rna-D1109_RS03495;Parent=gene-D1109_RS03495;anticodon=(pos:complement(756148..756150));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS03495;product=tRNA-Gln NZ_CP031858.1 tRNAscan-SE exon 756108 756182 . - . ID=exon-D1109_RS03495-1;Parent=rna-D1109_RS03495;anticodon=(pos:complement(756148..756150));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS03495;product=tRNA-Gln NZ_CP031858.1 RefSeq gene 756231 756305 . - . ID=gene-D1109_RS03500;Name=D1109_RS03500;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS03500;old_locus_tag=D1109_03510 NZ_CP031858.1 tRNAscan-SE tRNA 756231 756305 . - . ID=rna-D1109_RS03500;Parent=gene-D1109_RS03500;anticodon=(pos:complement(756271..756273));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS03500;product=tRNA-Gln NZ_CP031858.1 tRNAscan-SE exon 756231 756305 . - . ID=exon-D1109_RS03500-1;Parent=rna-D1109_RS03500;anticodon=(pos:complement(756271..756273));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS03500;product=tRNA-Gln NZ_CP031858.1 RefSeq gene 756331 756415 . - . ID=gene-D1109_RS03505;Name=D1109_RS03505;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS03505;old_locus_tag=D1109_03515 NZ_CP031858.1 tRNAscan-SE tRNA 756331 756415 . - . ID=rna-D1109_RS03505;Parent=gene-D1109_RS03505;anticodon=(pos:complement(756379..756381));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS03505;product=tRNA-Leu NZ_CP031858.1 tRNAscan-SE exon 756331 756415 . - . ID=exon-D1109_RS03505-1;Parent=rna-D1109_RS03505;anticodon=(pos:complement(756379..756381));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS03505;product=tRNA-Leu NZ_CP031858.1 RefSeq gene 756419 756495 . - . ID=gene-D1109_RS03510;Name=D1109_RS03510;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS03510;old_locus_tag=D1109_03520 NZ_CP031858.1 tRNAscan-SE tRNA 756419 756495 . - . ID=rna-D1109_RS03510;Parent=gene-D1109_RS03510;anticodon=(pos:complement(756459..756461));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS03510;product=tRNA-Met NZ_CP031858.1 tRNAscan-SE exon 756419 756495 . - . ID=exon-D1109_RS03510-1;Parent=rna-D1109_RS03510;anticodon=(pos:complement(756459..756461));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS03510;product=tRNA-Met NZ_CP031858.1 RefSeq gene 756670 757494 . - . ID=gene-D1109_RS03515;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=D1109_RS03515;old_locus_tag=D1109_03525 NZ_CP031858.1 Protein Homology CDS 756670 757494 . - 0 ID=cds-WP_005601621.1;Parent=gene-D1109_RS03515;Dbxref=Genbank:WP_005601621.1;Name=WP_005601621.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005615478.1;locus_tag=D1109_RS03515;product=shikimate dehydrogenase;protein_id=WP_005601621.1;transl_table=11 NZ_CP031858.1 RefSeq gene 757501 758055 . - . ID=gene-D1109_RS03520;Name=D1109_RS03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03520;old_locus_tag=D1109_03530 NZ_CP031858.1 Protein Homology CDS 757501 758055 . - 0 ID=cds-WP_005601623.1;Parent=gene-D1109_RS03520;Dbxref=Genbank:WP_005601623.1;Name=WP_005601623.1;Ontology_term=GO:0003725;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005624002.1;locus_tag=D1109_RS03520;product=Sua5/YciO/YrdC/YwlC family protein;protein_id=WP_005601623.1;transl_table=11 NZ_CP031858.1 RefSeq gene 758048 758581 . - . ID=gene-D1109_RS03525;Name=D1109_RS03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03525;old_locus_tag=D1109_03535 NZ_CP031858.1 Protein Homology CDS 758048 758581 . - 0 ID=cds-WP_237611388.1;Parent=gene-D1109_RS03525;Dbxref=Genbank:WP_237611388.1;Name=WP_237611388.1;Ontology_term=GO:0005694;gbkey=CDS;go_component=chromosome|0005694||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263112.1;locus_tag=D1109_RS03525;product=topoisomerase DNA-binding C4 zinc finger domain-containing protein;protein_id=WP_237611388.1;transl_table=11 NZ_CP031858.1 RefSeq gene 758578 758886 . - . ID=gene-D1109_RS03530;Name=yqfB;gbkey=Gene;gene=yqfB;gene_biotype=protein_coding;locus_tag=D1109_RS03530;old_locus_tag=D1109_03540 NZ_CP031858.1 Protein Homology CDS 758578 758886 . - 0 ID=cds-WP_005608348.1;Parent=gene-D1109_RS03530;Dbxref=Genbank:WP_005608348.1;Name=WP_005608348.1;gbkey=CDS;gene=yqfB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005608348.1;locus_tag=D1109_RS03530;product=N(4)-acetylcytidine aminohydrolase;protein_id=WP_005608348.1;transl_table=11 NZ_CP031858.1 RefSeq gene 758879 759334 . - . ID=gene-D1109_RS03535;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=D1109_RS03535;old_locus_tag=D1109_03545 NZ_CP031858.1 Protein Homology CDS 758879 759334 . - 0 ID=cds-WP_005601625.1;Parent=gene-D1109_RS03535;Dbxref=Genbank:WP_005601625.1;Name=WP_005601625.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005601625.1;locus_tag=D1109_RS03535;product=recombination regulator RecX;protein_id=WP_005601625.1;transl_table=11 NZ_CP031858.1 RefSeq gene 759405 760535 . - . ID=gene-D1109_RS03540;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=D1109_RS03540;old_locus_tag=D1109_03550 NZ_CP031858.1 Protein Homology CDS 759405 760535 . - 0 ID=cds-WP_005598042.1;Parent=gene-D1109_RS03540;Dbxref=Genbank:WP_005598042.1;Name=WP_005598042.1;Ontology_term=GO:0006281,GO:0006310,GO:0009432,GO:0003677,GO:0008094;gbkey=CDS;gene=recA;go_function=DNA binding|0003677||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991950.1;locus_tag=D1109_RS03540;product=recombinase RecA;protein_id=WP_005598042.1;transl_table=11 NZ_CP031858.1 RefSeq gene 760649 761254 . - . ID=gene-D1109_RS03545;Name=D1109_RS03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03545;old_locus_tag=D1109_03555 NZ_CP031858.1 Protein Homology CDS 760649 761254 . - 0 ID=cds-WP_005619440.1;Parent=gene-D1109_RS03545;Dbxref=Genbank:WP_005619440.1;Name=WP_005619440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263114.1;locus_tag=D1109_RS03545;product=aminotransferase class IV family protein;protein_id=WP_005619440.1;transl_table=11 NZ_CP031858.1 RefSeq gene 761232 762200 . - . ID=gene-D1109_RS03550;Name=D1109_RS03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03550;old_locus_tag=D1109_03560 NZ_CP031858.1 Protein Homology CDS 761232 762200 . - 0 ID=cds-WP_005615488.1;Parent=gene-D1109_RS03550;Dbxref=Genbank:WP_005615488.1;Name=WP_005615488.1;Ontology_term=GO:0009058;gbkey=CDS;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005612571.1;locus_tag=D1109_RS03550;product=aminodeoxychorismate synthase component I;protein_id=WP_005615488.1;transl_table=11 NZ_CP031858.1 RefSeq gene 762335 763969 . + . ID=gene-D1109_RS03555;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=D1109_RS03555;old_locus_tag=D1109_03565 NZ_CP031858.1 Protein Homology CDS 762335 763969 . + 0 ID=cds-WP_237611389.1;Parent=gene-D1109_RS03555;Dbxref=Genbank:WP_237611389.1;Name=WP_237611389.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005601633.1;locus_tag=D1109_RS03555;product=DNA recombination protein RmuC;protein_id=WP_237611389.1;transl_table=11 NZ_CP031858.1 RefSeq gene 763941 764537 . + . ID=gene-D1109_RS03560;Name=D1109_RS03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03560;old_locus_tag=D1109_03570 NZ_CP031858.1 Protein Homology CDS 763941 764537 . + 0 ID=cds-WP_215577895.1;Parent=gene-D1109_RS03560;Dbxref=Genbank:WP_215577895.1;Name=WP_215577895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005608357.1;locus_tag=D1109_RS03560;product=anthranilate synthase component II;protein_id=WP_215577895.1;transl_table=11 NZ_CP031858.1 RefSeq gene 764642 765091 . + . ID=gene-D1109_RS03565;Name=D1109_RS03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03565;old_locus_tag=D1109_03575 NZ_CP031858.1 Protein Homology CDS 764642 765091 . + 0 ID=cds-WP_005608359.1;Parent=gene-D1109_RS03565;Dbxref=Genbank:WP_005608359.1;Name=WP_005608359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005619439.1;locus_tag=D1109_RS03565;product=DUF302 domain-containing protein;protein_id=WP_005608359.1;transl_table=11 NZ_CP031858.1 RefSeq gene 765264 767039 . + . ID=gene-D1109_RS03570;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=D1109_RS03570;old_locus_tag=D1109_03580 NZ_CP031858.1 Protein Homology CDS 765264 767039 . + 0 ID=cds-WP_215577896.1;Parent=gene-D1109_RS03570;Dbxref=Genbank:WP_215577896.1;Name=WP_215577896.1;Ontology_term=GO:0006422,GO:0004815;gbkey=CDS;gene=aspS;go_function=aspartate-tRNA ligase activity|0004815||IEA;go_process=aspartyl-tRNA aminoacylation|0006422||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005601639.1;locus_tag=D1109_RS03570;product=aspartate--tRNA ligase;protein_id=WP_215577896.1;transl_table=11 NZ_CP031858.1 RefSeq gene 767073 767543 . + . ID=gene-D1109_RS03575;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=D1109_RS03575;old_locus_tag=D1109_03585 NZ_CP031858.1 Protein Homology CDS 767073 767543 . + 0 ID=cds-WP_005598052.1;Parent=gene-D1109_RS03575;Dbxref=Genbank:WP_005598052.1;Name=WP_005598052.1;Ontology_term=GO:0046656,GO:0008828,GO:0019177;gbkey=CDS;gene=nudB;go_function=dATP pyrophosphohydrolase activity|0008828||IEA,dihydroneopterin triphosphate pyrophosphohydrolase activity|0019177||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651609.1;locus_tag=D1109_RS03575;product=dihydroneopterin triphosphate diphosphatase;protein_id=WP_005598052.1;transl_table=11 NZ_CP031858.1 RefSeq gene 767567 768307 . + . ID=gene-D1109_RS03580;Name=D1109_RS03580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03580;old_locus_tag=D1109_03590 NZ_CP031858.1 Protein Homology CDS 767567 768307 . + 0 ID=cds-WP_005601643.1;Parent=gene-D1109_RS03580;Dbxref=Genbank:WP_005601643.1;Name=WP_005601643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011199889.1;locus_tag=D1109_RS03580;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_005601643.1;transl_table=11 NZ_CP031858.1 RefSeq gene 768440 768964 . + . ID=gene-D1109_RS03585;Name=D1109_RS03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03585;old_locus_tag=D1109_03595 NZ_CP031858.1 Protein Homology CDS 768440 768964 . + 0 ID=cds-WP_005612583.1;Parent=gene-D1109_RS03585;Dbxref=Genbank:WP_005612583.1;Name=WP_005612583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005612583.1;locus_tag=D1109_RS03585;product=hypothetical protein;protein_id=WP_005612583.1;transl_table=11 NZ_CP031858.1 RefSeq gene 769048 769626 . + . ID=gene-D1109_RS03590;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=D1109_RS03590;old_locus_tag=D1109_03600 NZ_CP031858.1 Protein Homology CDS 769048 769626 . + 0 ID=cds-WP_005615497.1;Parent=gene-D1109_RS03590;Dbxref=Genbank:WP_005615497.1;Name=WP_005615497.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction endodeoxyribonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991005.1;locus_tag=D1109_RS03590;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_005615497.1;transl_table=11 NZ_CP031858.1 RefSeq gene 769666 771180 . - . ID=gene-D1109_RS03595;Name=D1109_RS03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03595;old_locus_tag=D1109_03605 NZ_CP031858.1 Protein Homology CDS 769666 771180 . - 0 ID=cds-WP_237592559.1;Parent=gene-D1109_RS03595;Dbxref=Genbank:WP_237592559.1;Name=WP_237592559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604889.1;locus_tag=D1109_RS03595;product=insulinase family protein;protein_id=WP_237592559.1;transl_table=11 NZ_CP031858.1 RefSeq gene 771338 773611 . - . ID=gene-D1109_RS03600;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=D1109_RS03600;old_locus_tag=D1109_03610 NZ_CP031858.1 Protein Homology CDS 771338 773611 . - 0 ID=cds-WP_237611390.1;Parent=gene-D1109_RS03600;Dbxref=Genbank:WP_237611390.1;Name=WP_237611390.1;Ontology_term=GO:0008652,GO:0009086,GO:0003871;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA;go_process=cellular amino acid biosynthetic process|0008652||IEA,methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263120.1;locus_tag=D1109_RS03600;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_237611390.1;transl_table=11 NZ_CP031858.1 RefSeq pseudogene 773842 775302 . - . ID=gene-D1109_RS03605;Name=D1109_RS03605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D1109_RS03605;old_locus_tag=D1109_03615;pseudo=true NZ_CP031858.1 Protein Homology CDS 773842 775302 . - 0 ID=cds-D1109_RS03605;Parent=gene-D1109_RS03605;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604894.1;locus_tag=D1109_RS03605;product=anion permease;pseudo=true;transl_table=11 NZ_CP031858.1 RefSeq gene 775529 776458 . + . ID=gene-D1109_RS03610;Name=D1109_RS03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03610;old_locus_tag=D1109_03620 NZ_CP031858.1 Protein Homology CDS 775529 776458 . + 0 ID=cds-WP_005604895.1;Parent=gene-D1109_RS03610;Dbxref=Genbank:WP_005604895.1;Name=WP_005604895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598065.1;locus_tag=D1109_RS03610;product=LysR family transcriptional regulator;protein_id=WP_005604895.1;transl_table=11 NZ_CP031858.1 RefSeq gene 776536 777672 . - . ID=gene-D1109_RS03615;Name=D1109_RS03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03615 NZ_CP031858.1 Protein Homology CDS 776536 777672 . - 0 ID=cds-WP_237611391.1;Parent=gene-D1109_RS03615;Dbxref=Genbank:WP_237611391.1;Name=WP_237611391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263123.1;locus_tag=D1109_RS03615;product=transferrin-binding protein-like solute binding protein;protein_id=WP_237611391.1;transl_table=11 NZ_CP031858.1 RefSeq gene 777805 778854 . - . ID=gene-D1109_RS03620;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;locus_tag=D1109_RS03620;old_locus_tag=D1109_03635 NZ_CP031858.1 Protein Homology CDS 777805 778854 . - 0 ID=cds-WP_005598071.1;Parent=gene-D1109_RS03620;Dbxref=Genbank:WP_005598071.1;Name=WP_005598071.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=rluB;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005612594.1;locus_tag=D1109_RS03620;product=23S rRNA pseudouridine(2605) synthase RluB;protein_id=WP_005598071.1;transl_table=11 NZ_CP031858.1 RefSeq gene 778926 779543 . - . ID=gene-D1109_RS03625;Name=D1109_RS03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03625;old_locus_tag=D1109_03640 NZ_CP031858.1 Protein Homology CDS 778926 779543 . - 0 ID=cds-WP_005598073.1;Parent=gene-D1109_RS03625;Dbxref=Genbank:WP_005598073.1;Name=WP_005598073.1;Ontology_term=GO:0006400;gbkey=CDS;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014990994.1;locus_tag=D1109_RS03625;product=threonylcarbamoyl-AMP synthase;protein_id=WP_005598073.1;transl_table=11 NZ_CP031858.1 RefSeq gene 779741 779971 . - . ID=gene-D1109_RS03630;Name=D1109_RS03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03630;old_locus_tag=D1109_03645 NZ_CP031858.1 Protein Homology CDS 779741 779971 . - 0 ID=cds-WP_043990942.1;Parent=gene-D1109_RS03630;Dbxref=Genbank:WP_043990942.1;Name=WP_043990942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005619435.1;locus_tag=D1109_RS03630;product=hypothetical protein;protein_id=WP_043990942.1;transl_table=11 NZ_CP031858.1 RefSeq gene 780074 780970 . - . ID=gene-D1109_RS03635;Name=D1109_RS03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03635;old_locus_tag=D1109_03650 NZ_CP031858.1 Protein Homology CDS 780074 780970 . - 0 ID=cds-WP_237611392.1;Parent=gene-D1109_RS03635;Dbxref=Genbank:WP_237611392.1;Name=WP_237611392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005601659.1;locus_tag=D1109_RS03635;product=Dyp-type peroxidase;protein_id=WP_237611392.1;transl_table=11 NZ_CP031858.1 RefSeq gene 781130 782680 . + . ID=gene-D1109_RS03640;Name=D1109_RS03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03640;old_locus_tag=D1109_03655 NZ_CP031858.1 Protein Homology CDS 781130 782680 . + 0 ID=cds-WP_237611393.1;Parent=gene-D1109_RS03640;Dbxref=Genbank:WP_237611393.1;Name=WP_237611393.1;Ontology_term=GO:0009058,GO:0004049;gbkey=CDS;go_function=anthranilate synthase activity|0004049||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005615525.1;locus_tag=D1109_RS03640;product=anthranilate synthase component 1;protein_id=WP_237611393.1;transl_table=11 NZ_CP031858.1 RefSeq gene 782694 783281 . + . ID=gene-D1109_RS03645;Name=D1109_RS03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03645;old_locus_tag=D1109_03660 NZ_CP031858.1 Protein Homology CDS 782694 783281 . + 0 ID=cds-WP_005608392.1;Parent=gene-D1109_RS03645;Dbxref=Genbank:WP_005608392.1;Name=WP_005608392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005601661.1;locus_tag=D1109_RS03645;product=aminodeoxychorismate/anthranilate synthase component II;protein_id=WP_005608392.1;transl_table=11 NZ_CP031858.1 RefSeq gene 783338 784342 . + . ID=gene-D1109_RS03650;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=D1109_RS03650;old_locus_tag=D1109_03665 NZ_CP031858.1 Protein Homology CDS 783338 784342 . + 0 ID=cds-WP_237611394.1;Parent=gene-D1109_RS03650;Dbxref=Genbank:WP_237611394.1;Name=WP_237611394.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263124.1;locus_tag=D1109_RS03650;product=anthranilate phosphoribosyltransferase;protein_id=WP_237611394.1;transl_table=11 NZ_CP031858.1 RefSeq gene 784385 785140 . + . ID=gene-D1109_RS03655;Name=D1109_RS03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03655;old_locus_tag=D1109_03670 NZ_CP031858.1 Protein Homology CDS 784385 785140 . + 0 ID=cds-WP_005598083.1;Parent=gene-D1109_RS03655;Dbxref=Genbank:WP_005598083.1;Name=WP_005598083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012478502.1;locus_tag=D1109_RS03655;product=class I SAM-dependent methyltransferase;protein_id=WP_005598083.1;transl_table=11 NZ_CP031858.1 RefSeq gene 785167 786252 . - . ID=gene-D1109_RS03660;Name=D1109_RS03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03660;old_locus_tag=D1109_03675 NZ_CP031858.1 Protein Homology CDS 785167 786252 . - 0 ID=cds-WP_005598085.1;Parent=gene-D1109_RS03660;Dbxref=Genbank:WP_005598085.1;Name=WP_005598085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263125.1;locus_tag=D1109_RS03660;product=hypothetical protein;protein_id=WP_005598085.1;transl_table=11 NZ_CP031858.1 RefSeq gene 786448 786663 . + . ID=gene-D1109_RS03665;Name=D1109_RS03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03665;old_locus_tag=D1109_03680 NZ_CP031858.1 Protein Homology CDS 786448 786663 . + 0 ID=cds-WP_005598087.1;Parent=gene-D1109_RS03665;Dbxref=Genbank:WP_005598087.1;Name=WP_005598087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014990986.1;locus_tag=D1109_RS03665;product=YdcH family protein;protein_id=WP_005598087.1;transl_table=11 NZ_CP031858.1 RefSeq gene 786752 787201 . - . ID=gene-D1109_RS03670;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=D1109_RS03670;old_locus_tag=D1109_03685 NZ_CP031858.1 Protein Homology CDS 786752 787201 . - 0 ID=cds-WP_005598089.1;Parent=gene-D1109_RS03670;Dbxref=Genbank:WP_005598089.1;Name=WP_005598089.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplI;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011609589.1;locus_tag=D1109_RS03670;product=50S ribosomal protein L9;protein_id=WP_005598089.1;transl_table=11 NZ_CP031858.1 RefSeq gene 787219 787446 . - . ID=gene-D1109_RS03675;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=D1109_RS03675;old_locus_tag=D1109_03690 NZ_CP031858.1 Protein Homology CDS 787219 787446 . - 0 ID=cds-WP_005598105.1;Parent=gene-D1109_RS03675;Dbxref=Genbank:WP_005598105.1;Name=WP_005598105.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313205.1;locus_tag=D1109_RS03675;product=30S ribosomal protein S18;protein_id=WP_005598105.1;transl_table=11 NZ_CP031858.1 RefSeq gene 787421 787795 . - . ID=gene-D1109_RS03680;Name=priB;gbkey=Gene;gene=priB;gene_biotype=protein_coding;locus_tag=D1109_RS03680;old_locus_tag=D1109_03695 NZ_CP031858.1 Protein Homology CDS 787421 787795 . - 0 ID=cds-WP_005598106.1;Parent=gene-D1109_RS03680;Dbxref=Genbank:WP_005598106.1;Name=WP_005598106.1;Ontology_term=GO:0006269,GO:0003697;gbkey=CDS;gene=priB;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication%2C synthesis of RNA primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598106.1;locus_tag=D1109_RS03680;product=primosomal replication protein N;protein_id=WP_005598106.1;transl_table=11 NZ_CP031858.1 RefSeq gene 787770 788144 . - . ID=gene-D1109_RS03685;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=D1109_RS03685;old_locus_tag=D1109_03700 NZ_CP031858.1 Protein Homology CDS 787770 788144 . - 0 ID=cds-WP_005598107.1;Parent=gene-D1109_RS03685;Dbxref=Genbank:WP_005598107.1;Name=WP_005598107.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011199651.1;locus_tag=D1109_RS03685;product=30S ribosomal protein S6;protein_id=WP_005598107.1;transl_table=11 NZ_CP031858.1 RefSeq gene 788433 789719 . + . ID=gene-D1109_RS03690;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=D1109_RS03690;old_locus_tag=D1109_03705 NZ_CP031858.1 Protein Homology CDS 788433 789719 . + 0 ID=cds-WP_237611395.1;Parent=gene-D1109_RS03690;Dbxref=Genbank:WP_237611395.1;Name=WP_237611395.1;Ontology_term=GO:0006189,GO:0009152,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005608400.1;locus_tag=D1109_RS03690;product=phosphoribosylamine--glycine ligase;protein_id=WP_237611395.1;transl_table=11 NZ_CP031858.1 RefSeq gene 789811 790503 . - . ID=gene-D1109_RS03695;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=D1109_RS03695;old_locus_tag=D1109_03710 NZ_CP031858.1 Protein Homology CDS 789811 790503 . - 0 ID=cds-WP_005598109.1;Parent=gene-D1109_RS03695;Dbxref=Genbank:WP_005598109.1;Name=WP_005598109.1;Ontology_term=GO:0015890,GO:0015663,GO:0016021;gbkey=CDS;gene=pnuC;go_component=integral component of membrane|0016021||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598109.1;locus_tag=D1109_RS03695;product=nicotinamide riboside transporter PnuC;protein_id=WP_005598109.1;transl_table=11 NZ_CP031858.1 RefSeq gene 790630 791253 . - . ID=gene-D1109_RS03700;Name=D1109_RS03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03700;old_locus_tag=D1109_03715 NZ_CP031858.1 Protein Homology CDS 790630 791253 . - 0 ID=cds-WP_237611396.1;Parent=gene-D1109_RS03700;Dbxref=Genbank:WP_237611396.1;Name=WP_237611396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005601670.1;locus_tag=D1109_RS03700;product=tetratricopeptide repeat protein;protein_id=WP_237611396.1;transl_table=11 NZ_CP031858.1 RefSeq gene 791269 792540 . - . ID=gene-D1109_RS03705;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=D1109_RS03705;old_locus_tag=D1109_03720 NZ_CP031858.1 Protein Homology CDS 791269 792540 . - 0 ID=cds-WP_005601672.1;Parent=gene-D1109_RS03705;Dbxref=Genbank:WP_005601672.1;Name=WP_005601672.1;Ontology_term=GO:0006427,GO:0004821;gbkey=CDS;gene=hisS;go_function=histidine-tRNA ligase activity|0004821||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005617650.1;locus_tag=D1109_RS03705;product=histidine--tRNA ligase;protein_id=WP_005601672.1;transl_table=11 NZ_CP031858.1 RefSeq gene 792668 793780 . - . ID=gene-D1109_RS03710;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=D1109_RS03710;old_locus_tag=D1109_03725 NZ_CP031858.1 Protein Homology CDS 792668 793780 . - 0 ID=cds-WP_237611397.1;Parent=gene-D1109_RS03710;Dbxref=Genbank:WP_237611397.1;Name=WP_237611397.1;Ontology_term=GO:0044237,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity|0046429||IEA;go_process=cellular metabolic process|0044237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604923.1;locus_tag=D1109_RS03710;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_237611397.1;transl_table=11 NZ_CP031858.1 RefSeq gene 793790 794758 . - . ID=gene-D1109_RS03715;Name=D1109_RS03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03715;old_locus_tag=D1109_03730 NZ_CP031858.1 Protein Homology CDS 793790 794758 . - 0 ID=cds-WP_005598115.1;Parent=gene-D1109_RS03715;Dbxref=Genbank:WP_005598115.1;Name=WP_005598115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005608402.1;locus_tag=D1109_RS03715;product=DUF4115 domain-containing protein;protein_id=WP_005598115.1;transl_table=11 NZ_CP031858.1 RefSeq gene 795038 796594 . + . ID=gene-D1109_RS03720;Name=D1109_RS03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03720;old_locus_tag=D1109_03735 NZ_CP031858.1 Protein Homology CDS 795038 796594 . + 0 ID=cds-WP_005598119.1;Parent=gene-D1109_RS03720;Dbxref=Genbank:WP_005598119.1;Name=WP_005598119.1;Ontology_term=GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598119.1;locus_tag=D1109_RS03720;product=SulP family inorganic anion transporter;protein_id=WP_005598119.1;transl_table=11 NZ_CP031858.1 RefSeq gene 796905 798281 . - . ID=gene-D1109_RS03725;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=D1109_RS03725;old_locus_tag=D1109_03740 NZ_CP031858.1 Protein Homology CDS 796905 798281 . - 0 ID=cds-WP_005598124.1;Parent=gene-D1109_RS03725;Dbxref=Genbank:WP_005598124.1;Name=WP_005598124.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005617656.1;locus_tag=D1109_RS03725;product=argininosuccinate lyase;protein_id=WP_005598124.1;transl_table=11 NZ_CP031858.1 RefSeq gene 798446 799489 . - . ID=gene-D1109_RS03730;Name=D1109_RS03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03730;old_locus_tag=D1109_03745 NZ_CP031858.1 Protein Homology CDS 798446 799489 . - 0 ID=cds-WP_005598126.1;Parent=gene-D1109_RS03730;Dbxref=Genbank:WP_005598126.1;Name=WP_005598126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598126.1;locus_tag=D1109_RS03730;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_005598126.1;transl_table=11 NZ_CP031858.1 RefSeq gene 799737 801545 . + . ID=gene-D1109_RS03735;Name=D1109_RS03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03735;old_locus_tag=D1109_03750 NZ_CP031858.1 Protein Homology CDS 799737 801545 . + 0 ID=cds-WP_237611398.1;Parent=gene-D1109_RS03735;Dbxref=Genbank:WP_237611398.1;Name=WP_237611398.1;Ontology_term=GO:0006812,GO:1902600,GO:0005451,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=monovalent cation:proton antiporter activity|0005451||IEA;go_process=cation transport|0006812||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598128.1;locus_tag=D1109_RS03735;product=monovalent cation:proton antiporter-2 (CPA2) family protein;protein_id=WP_237611398.1;transl_table=11 NZ_CP031858.1 RefSeq gene 801740 802948 . + . ID=gene-D1109_RS03740;Name=D1109_RS03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03740;old_locus_tag=D1109_03755 NZ_CP031858.1 Protein Homology CDS 801740 802948 . + 0 ID=cds-WP_009874785.1;Parent=gene-D1109_RS03740;Dbxref=Genbank:WP_009874785.1;Name=WP_009874785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874785.1;locus_tag=D1109_RS03740;product=ATP-binding protein;protein_id=WP_009874785.1;transl_table=11 NZ_CP031858.1 RefSeq gene 803045 804445 . + . ID=gene-D1109_RS03745;Name=D1109_RS03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03745;old_locus_tag=D1109_03760 NZ_CP031858.1 Protein Homology CDS 803045 804445 . + 0 ID=cds-WP_009874786.1;Parent=gene-D1109_RS03745;Dbxref=Genbank:WP_009874786.1;Name=WP_009874786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005567059.1;locus_tag=D1109_RS03745;product=SIR2 family protein;protein_id=WP_009874786.1;transl_table=11 NZ_CP031858.1 RefSeq gene 804448 804945 . + . ID=gene-D1109_RS03750;Name=D1109_RS03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03750;old_locus_tag=D1109_03765 NZ_CP031858.1 Protein Homology CDS 804448 804945 . + 0 ID=cds-WP_009874787.1;Parent=gene-D1109_RS03750;Dbxref=Genbank:WP_009874787.1;Name=WP_009874787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874787.1;locus_tag=D1109_RS03750;product=TIR domain-containing protein;protein_id=WP_009874787.1;transl_table=11 NZ_CP031858.1 RefSeq gene 804959 805603 . + . ID=gene-D1109_RS03755;Name=D1109_RS03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03755;old_locus_tag=D1109_03770 NZ_CP031858.1 Protein Homology CDS 804959 805603 . + 0 ID=cds-WP_009874788.1;Parent=gene-D1109_RS03755;Dbxref=Genbank:WP_009874788.1;Name=WP_009874788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014167491.1;locus_tag=D1109_RS03755;product=TIR domain-containing protein;protein_id=WP_009874788.1;transl_table=11 NZ_CP031858.1 RefSeq gene 805825 806718 . - . ID=gene-D1109_RS03760;Name=D1109_RS03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03760;old_locus_tag=D1109_03775 NZ_CP031858.1 Protein Homology CDS 805825 806718 . - 0 ID=cds-WP_009874789.1;Parent=gene-D1109_RS03760;Dbxref=Genbank:WP_009874789.1;Name=WP_009874789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014992235.1;locus_tag=D1109_RS03760;product=LysR family transcriptional regulator;protein_id=WP_009874789.1;transl_table=11 NZ_CP031858.1 RefSeq gene 806843 807295 . + . ID=gene-D1109_RS03765;Name=D1109_RS03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03765;old_locus_tag=D1109_03780 NZ_CP031858.1 Protein Homology CDS 806843 807295 . + 0 ID=cds-WP_009874790.1;Parent=gene-D1109_RS03765;Dbxref=Genbank:WP_009874790.1;Name=WP_009874790.1;Ontology_term=GO:0030638;gbkey=CDS;go_process=polyketide metabolic process|0030638||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014992236.1;locus_tag=D1109_RS03765;product=ester cyclase;protein_id=WP_009874790.1;transl_table=11 NZ_CP031858.1 RefSeq gene 807418 808050 . - . ID=gene-D1109_RS03770;Name=D1109_RS03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03770;old_locus_tag=D1109_03785 NZ_CP031858.1 Protein Homology CDS 807418 808050 . - 0 ID=cds-WP_011848660.1;Parent=gene-D1109_RS03770;Dbxref=Genbank:WP_011848660.1;Name=WP_011848660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618679.1;locus_tag=D1109_RS03770;product=hypothetical protein;protein_id=WP_011848660.1;transl_table=11 NZ_CP031858.1 RefSeq pseudogene 808391 809241 . + . ID=gene-D1109_RS03775;Name=D1109_RS03775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D1109_RS03775;old_locus_tag=D1109_03790;pseudo=true NZ_CP031858.1 Protein Homology CDS 808391 809241 . + 0 ID=cds-D1109_RS03775;Parent=gene-D1109_RS03775;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263132.1;locus_tag=D1109_RS03775;product=AraC family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP031858.1 RefSeq gene 809300 810199 . - . ID=gene-D1109_RS03780;Name=D1109_RS03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03780;old_locus_tag=D1109_03795 NZ_CP031858.1 Protein Homology CDS 809300 810199 . - 0 ID=cds-WP_237611399.1;Parent=gene-D1109_RS03780;Dbxref=Genbank:WP_237611399.1;Name=WP_237611399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005622034.1;locus_tag=D1109_RS03780;product=LysR family transcriptional regulator;protein_id=WP_237611399.1;transl_table=11 NZ_CP031858.1 RefSeq gene 810290 811351 . + . ID=gene-D1109_RS03785;Name=D1109_RS03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03785;old_locus_tag=D1109_03800 NZ_CP031858.1 Protein Homology CDS 810290 811351 . + 0 ID=cds-WP_237611400.1;Parent=gene-D1109_RS03785;Dbxref=Genbank:WP_237611400.1;Name=WP_237611400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252242.1;locus_tag=D1109_RS03785;product=NADH:flavin oxidoreductase/NADH oxidase;protein_id=WP_237611400.1;transl_table=11 NZ_CP031858.1 RefSeq pseudogene 811432 812467 . + . ID=gene-D1109_RS03790;Name=D1109_RS03790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D1109_RS03790;old_locus_tag=D1109_03805;pseudo=true NZ_CP031858.1 Protein Homology CDS 811432 812467 . + 0 ID=cds-D1109_RS03790;Parent=gene-D1109_RS03790;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005615573.1;locus_tag=D1109_RS03790;product=LLM class flavin-dependent oxidoreductase;pseudo=true;transl_table=11 NZ_CP031858.1 RefSeq gene 812680 813894 . - . ID=gene-D1109_RS03795;Name=D1109_RS03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03795;old_locus_tag=D1109_03810 NZ_CP031858.1 Protein Homology CDS 812680 813894 . - 0 ID=cds-WP_011848542.1;Parent=gene-D1109_RS03795;Dbxref=Genbank:WP_011848542.1;Name=WP_011848542.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013579.2;locus_tag=D1109_RS03795;product=restriction endonuclease subunit S;protein_id=WP_011848542.1;transl_table=11 NZ_CP031858.1 RefSeq gene 813909 815561 . - . ID=gene-D1109_RS03800;Name=D1109_RS03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03800;old_locus_tag=D1109_03815 NZ_CP031858.1 Protein Homology CDS 813909 815561 . - 0 ID=cds-WP_009874795.1;Parent=gene-D1109_RS03800;Dbxref=Genbank:WP_009874795.1;Name=WP_009874795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874795.1;locus_tag=D1109_RS03800;product=type I restriction-modification system subunit M;protein_id=WP_009874795.1;transl_table=11 NZ_CP031858.1 RefSeq gene 815558 817438 . - . ID=gene-D1109_RS03805;Name=D1109_RS03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03805;old_locus_tag=D1109_03820 NZ_CP031858.1 Protein Homology CDS 815558 817438 . - 0 ID=cds-WP_009874796.1;Parent=gene-D1109_RS03805;Dbxref=Genbank:WP_009874796.1;Name=WP_009874796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874796.1;locus_tag=D1109_RS03805;product=putative DNA binding domain-containing protein;protein_id=WP_009874796.1;transl_table=11 NZ_CP031858.1 RefSeq gene 817440 820574 . - . ID=gene-D1109_RS03810;Name=D1109_RS03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03810;old_locus_tag=D1109_03825 NZ_CP031858.1 Protein Homology CDS 817440 820574 . - 0 ID=cds-WP_009874797.1;Parent=gene-D1109_RS03810;Dbxref=Genbank:WP_009874797.1;Name=WP_009874797.1;Ontology_term=GO:0006304;gbkey=CDS;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874797.1;locus_tag=D1109_RS03810;product=type I restriction endonuclease;protein_id=WP_009874797.1;transl_table=11 NZ_CP031858.1 RefSeq gene 820692 821558 . - . ID=gene-D1109_RS03815;Name=D1109_RS03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03815;old_locus_tag=D1109_03830 NZ_CP031858.1 Protein Homology CDS 820692 821558 . - 0 ID=cds-WP_009874798.1;Parent=gene-D1109_RS03815;Dbxref=Genbank:WP_009874798.1;Name=WP_009874798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005624908.1;locus_tag=D1109_RS03815;product=NAD(P)-dependent oxidoreductase;protein_id=WP_009874798.1;transl_table=11 NZ_CP031858.1 RefSeq gene 821812 822474 . + . ID=gene-D1109_RS03820;Name=D1109_RS03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03820;old_locus_tag=D1109_03835 NZ_CP031858.1 Protein Homology CDS 821812 822474 . + 0 ID=cds-WP_005604960.1;Parent=gene-D1109_RS03820;Dbxref=Genbank:WP_005604960.1;Name=WP_005604960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005610448.1;locus_tag=D1109_RS03820;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_005604960.1;transl_table=11 NZ_CP031858.1 RefSeq gene 822628 823245 . + . ID=gene-D1109_RS03825;Name=D1109_RS03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03825;old_locus_tag=D1109_03840 NZ_CP031858.1 Protein Homology CDS 822628 823245 . + 0 ID=cds-WP_009874800.1;Parent=gene-D1109_RS03825;Dbxref=Genbank:WP_009874800.1;Name=WP_009874800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006719828.1;locus_tag=D1109_RS03825;product=MarC family protein;protein_id=WP_009874800.1;transl_table=11 NZ_CP031858.1 RefSeq gene 823348 823773 . - . ID=gene-D1109_RS03830;Name=vsr;gbkey=Gene;gene=vsr;gene_biotype=protein_coding;locus_tag=D1109_RS03830;old_locus_tag=D1109_03845 NZ_CP031858.1 Protein Homology CDS 823348 823773 . - 0 ID=cds-WP_011848543.1;Parent=gene-D1109_RS03830;Dbxref=Genbank:WP_011848543.1;Name=WP_011848543.1;Ontology_term=GO:0006298,GO:0004520;gbkey=CDS;gene=vsr;go_function=endodeoxyribonuclease activity|0004520||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015674069.1;locus_tag=D1109_RS03830;product=DNA mismatch endonuclease Vsr;protein_id=WP_011848543.1;transl_table=11 NZ_CP031858.1 RefSeq gene 823780 825441 . - . ID=gene-D1109_RS03835;Name=D1109_RS03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03835;old_locus_tag=D1109_03850 NZ_CP031858.1 Protein Homology CDS 823780 825441 . - 0 ID=cds-WP_011848544.1;Parent=gene-D1109_RS03835;Dbxref=Genbank:WP_011848544.1;Name=WP_011848544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005612648.1;locus_tag=D1109_RS03835;product=TIGR02391 family protein;protein_id=WP_011848544.1;transl_table=11 NZ_CP031858.1 RefSeq gene 825457 826551 . - . ID=gene-D1109_RS03840;Name=D1109_RS03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03840;old_locus_tag=D1109_03855 NZ_CP031858.1 Protein Homology CDS 825457 826551 . - 0 ID=cds-WP_011848545.1;Parent=gene-D1109_RS03840;Dbxref=Genbank:WP_011848545.1;Name=WP_011848545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005612651.1;locus_tag=D1109_RS03840;product=DNA cytosine methyltransferase;protein_id=WP_011848545.1;transl_table=11 NZ_CP031858.1 RefSeq gene 826977 827540 . + . ID=gene-D1109_RS03845;Name=D1109_RS03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03845;old_locus_tag=D1109_03860 NZ_CP031858.1 Protein Homology CDS 826977 827540 . + 0 ID=cds-WP_005598156.1;Parent=gene-D1109_RS03845;Dbxref=Genbank:WP_005598156.1;Name=WP_005598156.1;Ontology_term=GO:0006633;gbkey=CDS;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598156.1;locus_tag=D1109_RS03845;product=ACP phosphodiesterase;protein_id=WP_005598156.1;transl_table=11 NZ_CP031858.1 RefSeq gene 827614 828471 . - . ID=gene-D1109_RS03850;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=protein_coding;locus_tag=D1109_RS03850;old_locus_tag=D1109_03865 NZ_CP031858.1 Protein Homology CDS 827614 828471 . - 0 ID=cds-WP_237611401.1;Parent=gene-D1109_RS03850;Dbxref=Genbank:WP_237611401.1;Name=WP_237611401.1;Ontology_term=GO:0046292,GO:0018738;gbkey=CDS;gene=fghA;go_function=S-formylglutathione hydrolase activity|0018738||IEA;go_process=formaldehyde metabolic process|0046292||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005615585.1;locus_tag=D1109_RS03850;product=S-formylglutathione hydrolase;protein_id=WP_237611401.1;transl_table=11 NZ_CP031858.1 RefSeq gene 828486 829280 . - . ID=gene-D1109_RS03855;Name=yghU;gbkey=Gene;gene=yghU;gene_biotype=protein_coding;locus_tag=D1109_RS03855;old_locus_tag=D1109_03870 NZ_CP031858.1 Protein Homology CDS 828486 829280 . - 0 ID=cds-WP_237611402.1;Parent=gene-D1109_RS03855;Dbxref=Genbank:WP_237611402.1;Name=WP_237611402.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yghU;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005624916.1;locus_tag=D1109_RS03855;product=glutathione-dependent disulfide-bond oxidoreductase;protein_id=WP_237611402.1;transl_table=11 NZ_CP031858.1 RefSeq gene 829456 829875 . - . ID=gene-D1109_RS03860;Name=D1109_RS03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03860;old_locus_tag=D1109_03875 NZ_CP031858.1 Protein Homology CDS 829456 829875 . - 0 ID=cds-WP_237611403.1;Parent=gene-D1109_RS03860;Dbxref=Genbank:WP_237611403.1;Name=WP_237611403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005624913.1;locus_tag=D1109_RS03860;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_237611403.1;transl_table=11 NZ_CP031858.1 RefSeq gene 829885 830142 . - . ID=gene-D1109_RS03865;Name=D1109_RS03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03865;old_locus_tag=D1109_03880 NZ_CP031858.1 Protein Homology CDS 829885 830142 . - 0 ID=cds-WP_237611404.1;Parent=gene-D1109_RS03865;Dbxref=Genbank:WP_237611404.1;Name=WP_237611404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598164.1;locus_tag=D1109_RS03865;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_237611404.1;transl_table=11 NZ_CP031858.1 RefSeq gene 830292 831410 . - . ID=gene-D1109_RS03870;Name=D1109_RS03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03870;old_locus_tag=D1109_03885 NZ_CP031858.1 Protein Homology CDS 830292 831410 . - 0 ID=cds-WP_005598166.1;Parent=gene-D1109_RS03870;Dbxref=Genbank:WP_005598166.1;Name=WP_005598166.1;Ontology_term=GO:0006113,GO:0009404,GO:0004024,GO:0051903;gbkey=CDS;go_function=alcohol dehydrogenase activity%2C zinc-dependent|0004024||IEA,S-(hydroxymethyl)glutathione dehydrogenase activity|0051903||IEA;go_process=fermentation|0006113||IEA,toxin metabolic process|0009404||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015674452.1;locus_tag=D1109_RS03870;product=S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;protein_id=WP_005598166.1;transl_table=11 NZ_CP031858.1 RefSeq gene 831565 833592 . - . ID=gene-D1109_RS03875;Name=D1109_RS03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03875;old_locus_tag=D1109_03890 NZ_CP031858.1 Protein Homology CDS 831565 833592 . - 0 ID=cds-WP_005612659.1;Parent=gene-D1109_RS03875;Dbxref=Genbank:WP_005612659.1;Name=WP_005612659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263138.1;locus_tag=D1109_RS03875;product=BCCT family transporter;protein_id=WP_005612659.1;transl_table=11 NZ_CP031858.1 RefSeq gene 833889 834599 . + . ID=gene-D1109_RS03880;Name=D1109_RS03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03880;old_locus_tag=D1109_03895 NZ_CP031858.1 Protein Homology CDS 833889 834599 . + 0 ID=cds-WP_237611405.1;Parent=gene-D1109_RS03880;Dbxref=Genbank:WP_237611405.1;Name=WP_237611405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005612661.1;locus_tag=D1109_RS03880;product=GNAT family N-acetyltransferase;protein_id=WP_237611405.1;transl_table=11 NZ_CP031858.1 RefSeq gene 834593 835435 . + . ID=gene-D1109_RS03885;Name=D1109_RS03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03885;old_locus_tag=D1109_03900 NZ_CP031858.1 Protein Homology CDS 834593 835435 . + 0 ID=cds-WP_005598171.1;Parent=gene-D1109_RS03885;Dbxref=Genbank:WP_005598171.1;Name=WP_005598171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604969.1;locus_tag=D1109_RS03885;product=DUF72 domain-containing protein;protein_id=WP_005598171.1;transl_table=11 NZ_CP031858.1 RefSeq gene 835514 836464 . - . ID=gene-D1109_RS03890;Name=tehA;gbkey=Gene;gene=tehA;gene_biotype=protein_coding;locus_tag=D1109_RS03890;old_locus_tag=D1109_03905 NZ_CP031858.1 Protein Homology CDS 835514 836464 . - 0 ID=cds-WP_005604971.1;Parent=gene-D1109_RS03890;Dbxref=Genbank:WP_005604971.1;Name=WP_005604971.1;Ontology_term=GO:0055085,GO:0016021;gbkey=CDS;gene=tehA;go_component=integral component of membrane|0016021||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005601727.1;locus_tag=D1109_RS03890;product=dicarboxylate transporter/tellurite-resistance protein TehA;protein_id=WP_005604971.1;transl_table=11 NZ_CP031858.1 RefSeq gene 836560 837210 . - . ID=gene-D1109_RS03895;Name=hxpB;gbkey=Gene;gene=hxpB;gene_biotype=protein_coding;locus_tag=D1109_RS03895;old_locus_tag=D1109_03910 NZ_CP031858.1 Protein Homology CDS 836560 837210 . - 0 ID=cds-WP_005598175.1;Parent=gene-D1109_RS03895;Dbxref=Genbank:WP_005598175.1;Name=WP_005598175.1;gbkey=CDS;gene=hxpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651322.1;locus_tag=D1109_RS03895;product=hexitol phosphatase HxpB;protein_id=WP_005598175.1;transl_table=11 NZ_CP031858.1 RefSeq gene 837448 838011 . - . ID=gene-D1109_RS03900;Name=D1109_RS03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03900;old_locus_tag=D1109_03920 NZ_CP031858.1 Protein Homology CDS 837448 838011 . - 0 ID=cds-WP_005604973.1;Parent=gene-D1109_RS03900;Dbxref=Genbank:WP_005604973.1;Name=WP_005604973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604973.1;locus_tag=D1109_RS03900;product=flavin reductase family protein;protein_id=WP_005604973.1;transl_table=11 NZ_CP031858.1 RefSeq gene 838098 839942 . - . ID=gene-D1109_RS03905;Name=D1109_RS03905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03905;old_locus_tag=D1109_03925 NZ_CP031858.1 Protein Homology CDS 838098 839942 . - 0 ID=cds-WP_009874807.1;Parent=gene-D1109_RS03905;Dbxref=Genbank:WP_009874807.1;Name=WP_009874807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598177.1;locus_tag=D1109_RS03905;product=ABC transporter ATP-binding protein/permease;protein_id=WP_009874807.1;transl_table=11 NZ_CP031858.1 RefSeq gene 840048 840557 . - . ID=gene-D1109_RS03910;Name=luxS;gbkey=Gene;gene=luxS;gene_biotype=protein_coding;locus_tag=D1109_RS03910;old_locus_tag=D1109_03930 NZ_CP031858.1 Protein Homology CDS 840048 840557 . - 0 ID=cds-WP_005598178.1;Parent=gene-D1109_RS03910;Dbxref=Genbank:WP_005598178.1;Name=WP_005598178.1;gbkey=CDS;gene=luxS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005706864.1;locus_tag=D1109_RS03910;product=S-ribosylhomocysteine lyase;protein_id=WP_005598178.1;transl_table=11 NZ_CP031858.1 RefSeq gene 840612 843278 . - . ID=gene-D1109_RS03915;Name=D1109_RS03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03915;old_locus_tag=D1109_03935 NZ_CP031858.1 Protein Homology CDS 840612 843278 . - 0 ID=cds-WP_005617705.1;Parent=gene-D1109_RS03915;Dbxref=Genbank:WP_005617705.1;Name=WP_005617705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604975.1;locus_tag=D1109_RS03915;product=MlaD family protein;protein_id=WP_005617705.1;transl_table=11 NZ_CP031858.1 RefSeq gene 843426 843875 . - . ID=gene-D1109_RS03920;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=D1109_RS03920;old_locus_tag=D1109_03940 NZ_CP031858.1 Protein Homology CDS 843426 843875 . - 0 ID=cds-WP_005612673.1;Parent=gene-D1109_RS03920;Dbxref=Genbank:WP_005612673.1;Name=WP_005612673.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014990964.1;locus_tag=D1109_RS03920;product=ferric iron uptake transcriptional regulator;protein_id=WP_005612673.1;transl_table=11 NZ_CP031858.1 RefSeq gene 843904 844428 . - . ID=gene-D1109_RS03925;Name=fldA;gbkey=Gene;gene=fldA;gene_biotype=protein_coding;locus_tag=D1109_RS03925;old_locus_tag=D1109_03945 NZ_CP031858.1 Protein Homology CDS 843904 844428 . - 0 ID=cds-WP_005598185.1;Parent=gene-D1109_RS03925;Dbxref=Genbank:WP_005598185.1;Name=WP_005598185.1;gbkey=CDS;gene=fldA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006717621.1;locus_tag=D1109_RS03925;product=flavodoxin FldA;protein_id=WP_005598185.1;transl_table=11 NZ_CP031858.1 RefSeq gene 844450 844734 . - . ID=gene-D1109_RS03930;Name=ybfE;gbkey=Gene;gene=ybfE;gene_biotype=protein_coding;locus_tag=D1109_RS03930;old_locus_tag=D1109_03950 NZ_CP031858.1 Protein Homology CDS 844450 844734 . - 0 ID=cds-WP_005620439.1;Parent=gene-D1109_RS03930;Dbxref=Genbank:WP_005620439.1;Name=WP_005620439.1;gbkey=CDS;gene=ybfE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005620439.1;locus_tag=D1109_RS03930;product=LexA regulated protein;protein_id=WP_005620439.1;transl_table=11 NZ_CP031858.1 RefSeq gene 844943 845419 . - . ID=gene-D1109_RS03935;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=D1109_RS03935;old_locus_tag=D1109_03955 NZ_CP031858.1 Protein Homology CDS 844943 845419 . - 0 ID=cds-WP_237611406.1;Parent=gene-D1109_RS03935;Dbxref=Genbank:WP_237611406.1;Name=WP_237611406.1;Ontology_term=GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA editing activity|0002161||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263142.1;locus_tag=D1109_RS03935;product=Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK;protein_id=WP_237611406.1;transl_table=11 NZ_CP031858.1 RefSeq gene 845504 846505 . + . ID=gene-D1109_RS03940;Name=D1109_RS03940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03940;old_locus_tag=D1109_03960 NZ_CP031858.1 Protein Homology CDS 845504 846505 . + 0 ID=cds-WP_005598190.1;Parent=gene-D1109_RS03940;Dbxref=Genbank:WP_005598190.1;Name=WP_005598190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005615615.1;locus_tag=D1109_RS03940;product=oxidoreductase;protein_id=WP_005598190.1;transl_table=11 NZ_CP031858.1 RefSeq gene 846566 847861 . + . ID=gene-D1109_RS03945;Name=D1109_RS03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03945;old_locus_tag=D1109_03965 NZ_CP031858.1 Protein Homology CDS 846566 847861 . + 0 ID=cds-WP_237611407.1;Parent=gene-D1109_RS03945;Dbxref=Genbank:WP_237611407.1;Name=WP_237611407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005617710.1;locus_tag=D1109_RS03945;product=NCS2 family permease;protein_id=WP_237611407.1;transl_table=11 NZ_CP031858.1 RefSeq gene 847966 848316 . + . ID=gene-D1109_RS03950;Name=D1109_RS03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03950;old_locus_tag=D1109_03970 NZ_CP031858.1 Protein Homology CDS 847966 848316 . + 0 ID=cds-WP_005598192.1;Parent=gene-D1109_RS03950;Dbxref=Genbank:WP_005598192.1;Name=WP_005598192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001169669.1;locus_tag=D1109_RS03950;product=DsrE/DsrF/TusD sulfur relay family protein;protein_id=WP_005598192.1;transl_table=11 NZ_CP031858.1 RefSeq gene 848316 849503 . + . ID=gene-D1109_RS03955;Name=D1109_RS03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03955;old_locus_tag=D1109_03975 NZ_CP031858.1 Protein Homology CDS 848316 849503 . + 0 ID=cds-WP_005612678.1;Parent=gene-D1109_RS03955;Dbxref=Genbank:WP_005612678.1;Name=WP_005612678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598193.1;locus_tag=D1109_RS03955;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_005612678.1;transl_table=11 NZ_CP031858.1 RefSeq gene 849581 849799 . - . ID=gene-D1109_RS03960;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=D1109_RS03960;old_locus_tag=D1109_03980 NZ_CP031858.1 Protein Homology CDS 849581 849799 . - 0 ID=cds-WP_005598198.1;Parent=gene-D1109_RS03960;Dbxref=Genbank:WP_005598198.1;Name=WP_005598198.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001040186.1;locus_tag=D1109_RS03960;product=translation initiation factor IF-1;protein_id=WP_005598198.1;transl_table=11 NZ_CP031858.1 RefSeq gene 849892 850554 . - . ID=gene-D1109_RS03965;Name=D1109_RS03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03965;old_locus_tag=D1109_03985 NZ_CP031858.1 Protein Homology CDS 849892 850554 . - 0 ID=cds-WP_005598201.1;Parent=gene-D1109_RS03965;Dbxref=Genbank:WP_005598201.1;Name=WP_005598201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875525.1;locus_tag=D1109_RS03965;product=YtjB family periplasmic protein;protein_id=WP_005598201.1;transl_table=11 NZ_CP031858.1 RefSeq gene 850647 851516 . + . ID=gene-D1109_RS03970;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=D1109_RS03970;old_locus_tag=D1109_03990 NZ_CP031858.1 Protein Homology CDS 850647 851516 . + 0 ID=cds-WP_005615625.1;Parent=gene-D1109_RS03970;Dbxref=Genbank:WP_005615625.1;Name=WP_005615625.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598203.1;locus_tag=D1109_RS03970;product=phosphoserine phosphatase SerB;protein_id=WP_005615625.1;transl_table=11 NZ_CP031858.1 RefSeq gene 851566 852057 . + . ID=gene-D1109_RS03975;Name=D1109_RS03975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03975;old_locus_tag=D1109_03995 NZ_CP031858.1 Protein Homology CDS 851566 852057 . + 0 ID=cds-WP_005598205.1;Parent=gene-D1109_RS03975;Dbxref=Genbank:WP_005598205.1;Name=WP_005598205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651339.1;locus_tag=D1109_RS03975;product=YajQ family cyclic di-GMP-binding protein;protein_id=WP_005598205.1;transl_table=11 NZ_CP031858.1 RefSeq gene 852106 852303 . + . ID=gene-D1109_RS03980;Name=D1109_RS03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS03980;old_locus_tag=D1109_04000 NZ_CP031858.1 Protein Homology CDS 852106 852303 . + 0 ID=cds-WP_005620436.1;Parent=gene-D1109_RS03980;Dbxref=Genbank:WP_005620436.1;Name=WP_005620436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005620436.1;locus_tag=D1109_RS03980;product=DUF5363 domain-containing protein;protein_id=WP_005620436.1;transl_table=11 NZ_CP031858.1 RefSeq gene 852411 854810 . + . ID=gene-D1109_RS03985;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=D1109_RS03985;old_locus_tag=D1109_04005 NZ_CP031858.1 Protein Homology CDS 852411 854810 . + 0 ID=cds-WP_237611408.1;Parent=gene-D1109_RS03985;Dbxref=Genbank:WP_237611408.1;Name=WP_237611408.1;Ontology_term=GO:0005977,GO:0004645;gbkey=CDS;gene=glgP;go_function=1%2C4-alpha-oligoglucan phosphorylase activity|0004645||IEA;go_process=glycogen metabolic process|0005977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651341.1;locus_tag=D1109_RS03985;product=glycogen/starch/alpha-glucan family phosphorylase;protein_id=WP_237611408.1;transl_table=11 NZ_CP031858.1 RefSeq gene 854888 857605 . - . ID=gene-D1109_RS03990;Name=malT;gbkey=Gene;gene=malT;gene_biotype=protein_coding;locus_tag=D1109_RS03990;old_locus_tag=D1109_04010 NZ_CP031858.1 Protein Homology CDS 854888 857605 . - 0 ID=cds-WP_237611409.1;Parent=gene-D1109_RS03990;Dbxref=Genbank:WP_237611409.1;Name=WP_237611409.1;Ontology_term=GO:0006355,GO:0003677,GO:0005515;gbkey=CDS;gene=malT;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014990953.1;locus_tag=D1109_RS03990;product=HTH-type transcriptional regulator MalT;protein_id=WP_237611409.1;transl_table=11 NZ_CP031858.1 RefSeq gene 857720 858604 . - . ID=gene-D1109_RS03995;Name=malM;gbkey=Gene;gene=malM;gene_biotype=protein_coding;locus_tag=D1109_RS03995;old_locus_tag=D1109_04015 NZ_CP031858.1 Protein Homology CDS 857720 858604 . - 0 ID=cds-WP_005612687.1;Parent=gene-D1109_RS03995;Dbxref=Genbank:WP_005612687.1;Name=WP_005612687.1;Ontology_term=GO:0008643,GO:0042597;gbkey=CDS;gene=malM;go_component=periplasmic space|0042597||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263146.1;locus_tag=D1109_RS03995;product=maltose operon protein MalM;protein_id=WP_005612687.1;transl_table=11 NZ_CP031858.1 RefSeq gene 858676 859950 . - . ID=gene-D1109_RS04000;Name=D1109_RS04000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04000;old_locus_tag=D1109_04020 NZ_CP031858.1 Protein Homology CDS 858676 859950 . - 0 ID=cds-WP_237611410.1;Parent=gene-D1109_RS04000;Dbxref=Genbank:WP_237611410.1;Name=WP_237611410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014167704.1;locus_tag=D1109_RS04000;product=maltoporin;protein_id=WP_237611410.1;transl_table=11 NZ_CP031858.1 RefSeq gene 860020 861159 . - . ID=gene-D1109_RS04005;Name=malK;gbkey=Gene;gene=malK;gene_biotype=protein_coding;locus_tag=D1109_RS04005;old_locus_tag=D1109_04025 NZ_CP031858.1 Protein Homology CDS 860020 861159 . - 0 ID=cds-WP_005598215.1;Parent=gene-D1109_RS04005;Dbxref=Genbank:WP_005598215.1;Name=WP_005598215.1;Ontology_term=GO:0008643,GO:0055085,GO:0005524,GO:0140359,GO:0043190;gbkey=CDS;gene=malK;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598215.1;locus_tag=D1109_RS04005;product=maltose/maltodextrin ABC transporter ATP-binding protein MalK;protein_id=WP_005598215.1;transl_table=11 NZ_CP031858.1 RefSeq gene 861491 862675 . + . ID=gene-D1109_RS04010;Name=malE;gbkey=Gene;gene=malE;gene_biotype=protein_coding;locus_tag=D1109_RS04010;old_locus_tag=D1109_04030 NZ_CP031858.1 Protein Homology CDS 861491 862675 . + 0 ID=cds-WP_005598217.1;Parent=gene-D1109_RS04010;Dbxref=Genbank:WP_005598217.1;Name=WP_005598217.1;Ontology_term=GO:0008643,GO:0055085,GO:0015144;gbkey=CDS;gene=malE;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014990950.1;locus_tag=D1109_RS04010;product=maltose/maltodextrin ABC transporter substrate-binding protein MalE;protein_id=WP_005598217.1;transl_table=11 NZ_CP031858.1 RefSeq gene 862754 864304 . + . ID=gene-D1109_RS04015;Name=malF;gbkey=Gene;gene=malF;gene_biotype=protein_coding;locus_tag=D1109_RS04015;old_locus_tag=D1109_04035 NZ_CP031858.1 Protein Homology CDS 862754 864304 . + 0 ID=cds-WP_237611411.1;Parent=gene-D1109_RS04015;Dbxref=Genbank:WP_237611411.1;Name=WP_237611411.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=malF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005621952.1;locus_tag=D1109_RS04015;product=maltose ABC transporter permease MalF;protein_id=WP_237611411.1;transl_table=11 NZ_CP031858.1 RefSeq gene 864355 865245 . + . ID=gene-D1109_RS04020;Name=malG;gbkey=Gene;gene=malG;gene_biotype=protein_coding;locus_tag=D1109_RS04020;old_locus_tag=D1109_04040 NZ_CP031858.1 Protein Homology CDS 864355 865245 . + 0 ID=cds-WP_005598221.1;Parent=gene-D1109_RS04020;Dbxref=Genbank:WP_005598221.1;Name=WP_005598221.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=malG;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263149.1;locus_tag=D1109_RS04020;product=maltose ABC transporter permease MalG;protein_id=WP_005598221.1;transl_table=11 NZ_CP031858.1 RefSeq gene 865336 867354 . + . ID=gene-D1109_RS04025;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=D1109_RS04025;old_locus_tag=D1109_04045 NZ_CP031858.1 Protein Homology CDS 865336 867354 . + 0 ID=cds-WP_005604996.1;Parent=gene-D1109_RS04025;Dbxref=Genbank:WP_005604996.1;Name=WP_005604996.1;Ontology_term=GO:0005975,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875528.1;locus_tag=D1109_RS04025;product=4-alpha-glucanotransferase;protein_id=WP_005604996.1;transl_table=11 NZ_CP031858.1 RefSeq gene 867572 869158 . + . ID=gene-D1109_RS04030;Name=D1109_RS04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04030;old_locus_tag=D1109_04050 NZ_CP031858.1 Protein Homology CDS 867572 869158 . + 0 ID=cds-WP_005598225.1;Parent=gene-D1109_RS04030;Dbxref=Genbank:WP_005598225.1;Name=WP_005598225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005667512.1;locus_tag=D1109_RS04030;product=carbon starvation protein A;protein_id=WP_005598225.1;transl_table=11 NZ_CP031858.1 RefSeq gene 869224 870018 . + . ID=gene-D1109_RS04035;Name=D1109_RS04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04035;old_locus_tag=D1109_04055 NZ_CP031858.1 Protein Homology CDS 869224 870018 . + 0 ID=cds-WP_005598227.1;Parent=gene-D1109_RS04035;Dbxref=Genbank:WP_005598227.1;Name=WP_005598227.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651352.1;locus_tag=D1109_RS04035;product=TatD family hydrolase;protein_id=WP_005598227.1;transl_table=11 NZ_CP031858.1 RefSeq gene 870077 871447 . - . ID=gene-D1109_RS04040;Name=gorA;gbkey=Gene;gene=gorA;gene_biotype=protein_coding;locus_tag=D1109_RS04040;old_locus_tag=D1109_04060 NZ_CP031858.1 Protein Homology CDS 870077 871447 . - 0 ID=cds-WP_005598229.1;Parent=gene-D1109_RS04040;Dbxref=Genbank:WP_005598229.1;Name=WP_005598229.1;Ontology_term=GO:0006749,GO:0045454,GO:0004362,GO:0050660,GO:0050661;gbkey=CDS;gene=gorA;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=glutathione metabolic process|0006749||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009499791.1;locus_tag=D1109_RS04040;product=glutathione-disulfide reductase;protein_id=WP_005598229.1;transl_table=11 NZ_CP031858.1 RefSeq gene 871754 872542 . + . ID=gene-D1109_RS04045;Name=D1109_RS04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04045;old_locus_tag=D1109_04065 NZ_CP031858.1 Protein Homology CDS 871754 872542 . + 0 ID=cds-WP_005599960.1-2;Parent=gene-D1109_RS04045;Dbxref=Genbank:WP_005599960.1;Name=WP_005599960.1;Ontology_term=GO:0006313;gbkey=CDS;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618583.1;locus_tag=D1109_RS04045;product=transposase;protein_id=WP_005599960.1;transl_table=11 NZ_CP031858.1 RefSeq gene 872631 873149 . - . ID=gene-D1109_RS04050;Name=D1109_RS04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04050;old_locus_tag=D1109_04070 NZ_CP031858.1 Protein Homology CDS 872631 873149 . - 0 ID=cds-WP_009875256.1;Parent=gene-D1109_RS04050;Dbxref=Genbank:WP_009875256.1;Name=WP_009875256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005612691.1;locus_tag=D1109_RS04050;product=TIGR00645 family protein;protein_id=WP_009875256.1;transl_table=11 NZ_CP031858.1 RefSeq gene 873251 873889 . - . ID=gene-D1109_RS04055;Name=D1109_RS04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04055;old_locus_tag=D1109_04075 NZ_CP031858.1 Protein Homology CDS 873251 873889 . - 0 ID=cds-WP_005617723.1;Parent=gene-D1109_RS04055;Dbxref=Genbank:WP_005617723.1;Name=WP_005617723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005612693.1;locus_tag=D1109_RS04055;product=nitroreductase family protein;protein_id=WP_005617723.1;transl_table=11 NZ_CP031858.1 RefSeq gene 874052 874312 . - . ID=gene-D1109_RS04060;Name=D1109_RS04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04060;old_locus_tag=D1109_04080 NZ_CP031858.1 Protein Homology CDS 874052 874312 . - 0 ID=cds-WP_233432364.1;Parent=gene-D1109_RS04060;Dbxref=Genbank:WP_233432364.1;Name=WP_233432364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875257.1;locus_tag=D1109_RS04060;product=AzlD domain-containing protein;protein_id=WP_233432364.1;transl_table=11 NZ_CP031858.1 RefSeq gene 874345 875049 . - . ID=gene-D1109_RS04065;Name=D1109_RS04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04065;old_locus_tag=D1109_04085 NZ_CP031858.1 Protein Homology CDS 874345 875049 . - 0 ID=cds-WP_005598238.1;Parent=gene-D1109_RS04065;Dbxref=Genbank:WP_005598238.1;Name=WP_005598238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012478510.1;locus_tag=D1109_RS04065;product=AzlC family ABC transporter permease;protein_id=WP_005598238.1;transl_table=11 NZ_CP031858.1 RefSeq gene 875078 875878 . - . ID=gene-D1109_RS04070;Name=D1109_RS04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04070;old_locus_tag=D1109_04090 NZ_CP031858.1 Protein Homology CDS 875078 875878 . - 0 ID=cds-WP_005598241.1;Parent=gene-D1109_RS04070;Dbxref=Genbank:WP_005598241.1;Name=WP_005598241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598241.1;locus_tag=D1109_RS04070;product=ABC transporter ATP-binding protein;protein_id=WP_005598241.1;transl_table=11 NZ_CP031858.1 RefSeq gene 875994 877070 . - . ID=gene-D1109_RS04075;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;locus_tag=D1109_RS04075;old_locus_tag=D1109_04095 NZ_CP031858.1 Protein Homology CDS 875994 877070 . - 0 ID=cds-WP_009875258.1;Parent=gene-D1109_RS04075;Dbxref=Genbank:WP_009875258.1;Name=WP_009875258.1;Ontology_term=GO:0005975,GO:0006096,GO:0004332;gbkey=CDS;gene=fbaA;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017806342.1;locus_tag=D1109_RS04075;product=class II fructose-bisphosphate aldolase;protein_id=WP_009875258.1;transl_table=11 NZ_CP031858.1 RefSeq gene 877171 878346 . - . ID=gene-D1109_RS04080;Name=D1109_RS04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04080;old_locus_tag=D1109_04100 NZ_CP031858.1 Protein Homology CDS 877171 878346 . - 0 ID=cds-WP_005612697.1;Parent=gene-D1109_RS04080;Dbxref=Genbank:WP_005612697.1;Name=WP_005612697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012072290.1;locus_tag=D1109_RS04080;product=phosphoglycerate kinase;protein_id=WP_005612697.1;transl_table=11 NZ_CP031858.1 RefSeq gene 878504 879892 . - . ID=gene-D1109_RS04085;Name=D1109_RS04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04085;old_locus_tag=D1109_04105 NZ_CP031858.1 Protein Homology CDS 878504 879892 . - 0 ID=cds-WP_005619201.1;Parent=gene-D1109_RS04085;Dbxref=Genbank:WP_005619201.1;Name=WP_005619201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005619201.1;locus_tag=D1109_RS04085;product=SLC13 family permease;protein_id=WP_005619201.1;transl_table=11 NZ_CP031858.1 RefSeq gene 880123 881397 . - . ID=gene-D1109_RS04090;Name=D1109_RS04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04090;old_locus_tag=D1109_04110 NZ_CP031858.1 Protein Homology CDS 880123 881397 . - 0 ID=cds-WP_005617730.1;Parent=gene-D1109_RS04090;Dbxref=Genbank:WP_005617730.1;Name=WP_005617730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875260.1;locus_tag=D1109_RS04090;product=SLC13 family permease;protein_id=WP_005617730.1;transl_table=11 NZ_CP031858.1 RefSeq gene 881702 883093 . - . ID=gene-D1109_RS04095;Name=D1109_RS04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04095;old_locus_tag=D1109_04115 NZ_CP031858.1 Protein Homology CDS 881702 883093 . - 0 ID=cds-WP_005598255.1;Parent=gene-D1109_RS04095;Dbxref=Genbank:WP_005598255.1;Name=WP_005598255.1;Ontology_term=GO:0006820,GO:0008509,GO:0005887;gbkey=CDS;go_component=integral component of plasma membrane|0005887||IEA;go_function=anion transmembrane transporter activity|0008509||IEA;go_process=anion transport|0006820||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012478512.1;locus_tag=D1109_RS04095;product=DASS family sodium-coupled anion symporter;protein_id=WP_005598255.1;transl_table=11 NZ_CP031858.1 RefSeq gene 883288 885201 . - . ID=gene-D1109_RS04100;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=D1109_RS04100;old_locus_tag=D1109_04120 NZ_CP031858.1 Protein Homology CDS 883288 885201 . - 0 ID=cds-WP_005605018.1;Parent=gene-D1109_RS04100;Dbxref=Genbank:WP_005605018.1;Name=WP_005605018.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parE;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875262.1;locus_tag=D1109_RS04100;product=DNA topoisomerase IV subunit B;protein_id=WP_005605018.1;transl_table=11 NZ_CP031858.1 RefSeq gene 885279 886571 . - . ID=gene-D1109_RS04105;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=D1109_RS04105;old_locus_tag=D1109_04125 NZ_CP031858.1 Protein Homology CDS 885279 886571 . - 0 ID=cds-WP_237611412.1;Parent=gene-D1109_RS04105;Dbxref=Genbank:WP_237611412.1;Name=WP_237611412.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0004721,GO:0016021;gbkey=CDS;gene=phoR;go_component=integral component of membrane|0016021||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphoprotein phosphatase activity|0004721||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of transcription%2C DNA-templated|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263151.1;locus_tag=D1109_RS04105;product=phosphate regulon sensor histidine kinase PhoR;protein_id=WP_237611412.1;transl_table=11 NZ_CP031858.1 RefSeq gene 886571 887212 . - . ID=gene-D1109_RS04110;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=D1109_RS04110;old_locus_tag=D1109_04130 NZ_CP031858.1 Protein Homology CDS 886571 887212 . - 0 ID=cds-WP_005598262.1;Parent=gene-D1109_RS04110;Dbxref=Genbank:WP_005598262.1;Name=WP_005598262.1;Ontology_term=GO:0000160,GO:0006355,GO:0006796,GO:0000156,GO:0003700;gbkey=CDS;gene=phoB;go_function=phosphorelay response regulator activity|0000156||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of transcription%2C DNA-templated|0006355||IEA,phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598262.1;locus_tag=D1109_RS04110;product=phosphate regulon transcriptional regulator PhoB;protein_id=WP_005598262.1;transl_table=11 NZ_CP031858.1 RefSeq gene 887392 888162 . - . ID=gene-D1109_RS04115;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=D1109_RS04115;old_locus_tag=D1109_04135 NZ_CP031858.1 Protein Homology CDS 887392 888162 . - 0 ID=cds-WP_237611413.1;Parent=gene-D1109_RS04115;Dbxref=Genbank:WP_237611413.1;Name=WP_237611413.1;Ontology_term=GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014668101.1;locus_tag=D1109_RS04115;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_237611413.1;transl_table=11 NZ_CP031858.1 RefSeq gene 888171 888914 . - . ID=gene-D1109_RS04120;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=D1109_RS04120;old_locus_tag=D1109_04140 NZ_CP031858.1 Protein Homology CDS 888171 888914 . - 0 ID=cds-WP_237611492.1;Parent=gene-D1109_RS04120;Dbxref=Genbank:WP_237611492.1;Name=WP_237611492.1;Ontology_term=GO:0015415,GO:0005887,GO:0055052;gbkey=CDS;gene=pstA;go_component=integral component of plasma membrane|0005887||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005726155.1;locus_tag=D1109_RS04120;product=phosphate ABC transporter permease PstA;protein_id=WP_237611492.1;transl_table=11 NZ_CP031858.1 RefSeq gene 889022 889966 . - . ID=gene-D1109_RS04125;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=D1109_RS04125;old_locus_tag=D1109_04145 NZ_CP031858.1 Protein Homology CDS 889022 889966 . - 0 ID=cds-WP_237611414.1;Parent=gene-D1109_RS04125;Dbxref=Genbank:WP_237611414.1;Name=WP_237611414.1;Ontology_term=GO:0015415,GO:0005887,GO:0055052;gbkey=CDS;gene=pstC;go_component=integral component of plasma membrane|0005887||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263154.1;locus_tag=D1109_RS04125;product=phosphate ABC transporter permease subunit PstC;protein_id=WP_237611414.1;transl_table=11 NZ_CP031858.1 RefSeq gene 890115 891101 . - . ID=gene-D1109_RS04130;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=D1109_RS04130;old_locus_tag=D1109_04150 NZ_CP031858.1 Protein Homology CDS 890115 891101 . - 0 ID=cds-WP_231957269.1;Parent=gene-D1109_RS04130;Dbxref=Genbank:WP_231957269.1;Name=WP_231957269.1;Ontology_term=GO:0035435,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=phosphate ion binding|0042301||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005761538.1;locus_tag=D1109_RS04130;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_231957269.1;transl_table=11 NZ_CP031858.1 RefSeq gene 891291 891677 . - . ID=gene-D1109_RS04135;Name=D1109_RS04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04135;old_locus_tag=D1109_04155 NZ_CP031858.1 Protein Homology CDS 891291 891677 . - 0 ID=cds-WP_005605029.1;Parent=gene-D1109_RS04135;Dbxref=Genbank:WP_005605029.1;Name=WP_005605029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005612712.1;locus_tag=D1109_RS04135;product=Cu(I)-responsive transcriptional regulator;protein_id=WP_005605029.1;transl_table=11 NZ_CP031858.1 RefSeq gene 891763 892215 . + . ID=gene-D1109_RS04140;Name=D1109_RS04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04140;old_locus_tag=D1109_04160 NZ_CP031858.1 Protein Homology CDS 891763 892215 . + 0 ID=cds-WP_005608485.1;Parent=gene-D1109_RS04140;Dbxref=Genbank:WP_005608485.1;Name=WP_005608485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014990926.1;locus_tag=D1109_RS04140;product=DUF411 domain-containing protein;protein_id=WP_005608485.1;transl_table=11 NZ_CP031858.1 RefSeq gene 892233 892433 . + . ID=gene-D1109_RS04145;Name=D1109_RS04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04145;old_locus_tag=D1109_04165 NZ_CP031858.1 Protein Homology CDS 892233 892433 . + 0 ID=cds-WP_005605034.1;Parent=gene-D1109_RS04145;Dbxref=Genbank:WP_005605034.1;Name=WP_005605034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598277.1;locus_tag=D1109_RS04145;product=heavy-metal-associated domain-containing protein;protein_id=WP_005605034.1;transl_table=11 NZ_CP031858.1 RefSeq gene 892672 894822 . + . ID=gene-D1109_RS04150;Name=cadA;gbkey=Gene;gene=cadA;gene_biotype=protein_coding;locus_tag=D1109_RS04150;old_locus_tag=D1109_04170 NZ_CP031858.1 Protein Homology CDS 892672 894822 . + 0 ID=cds-WP_237611415.1;Parent=gene-D1109_RS04150;Dbxref=Genbank:WP_237611415.1;Name=WP_237611415.1;Ontology_term=GO:0015691,GO:0015434;gbkey=CDS;gene=cadA;go_function=ABC-type cadmium transporter activity|0015434||IEA;go_process=cadmium ion transport|0015691||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014990924.1;locus_tag=D1109_RS04150;product=cadmium-translocating P-type ATPase;protein_id=WP_237611415.1;transl_table=11 NZ_CP031858.1 RefSeq gene 894920 895741 . - . ID=gene-D1109_RS04155;Name=D1109_RS04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04155;old_locus_tag=D1109_04175 NZ_CP031858.1 Protein Homology CDS 894920 895741 . - 0 ID=cds-WP_005620429.1;Parent=gene-D1109_RS04155;Dbxref=Genbank:WP_005620429.1;Name=WP_005620429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005620429.1;locus_tag=D1109_RS04155;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_005620429.1;transl_table=11 NZ_CP031858.1 RefSeq gene 895769 896344 . - . ID=gene-D1109_RS04160;Name=D1109_RS04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04160;old_locus_tag=D1109_04180 NZ_CP031858.1 Protein Homology CDS 895769 896344 . - 0 ID=cds-WP_005598283.1;Parent=gene-D1109_RS04160;Dbxref=Genbank:WP_005598283.1;Name=WP_005598283.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598283.1;locus_tag=D1109_RS04160;product=NAD(P)H nitroreductase;protein_id=WP_005598283.1;transl_table=11 NZ_CP031858.1 RefSeq gene 896447 898303 . + . ID=gene-D1109_RS04165;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=D1109_RS04165;old_locus_tag=D1109_04185 NZ_CP031858.1 Protein Homology CDS 896447 898303 . + 0 ID=cds-WP_009875269.1;Parent=gene-D1109_RS04165;Dbxref=Genbank:WP_009875269.1;Name=WP_009875269.1;Ontology_term=GO:0006465,GO:0006508,GO:0008233,GO:0016021;gbkey=CDS;gene=sppA;go_component=integral component of membrane|0016021||IEA;go_function=peptidase activity|0008233||IEA;go_process=signal peptide processing|0006465||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005615678.1;locus_tag=D1109_RS04165;product=signal peptide peptidase SppA;protein_id=WP_009875269.1;transl_table=11 NZ_CP031858.1 RefSeq gene 898438 899205 . + . ID=gene-D1109_RS04170;Name=D1109_RS04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04170;old_locus_tag=D1109_04190 NZ_CP031858.1 Protein Homology CDS 898438 899205 . + 0 ID=cds-WP_005608491.1;Parent=gene-D1109_RS04170;Dbxref=Genbank:WP_005608491.1;Name=WP_005608491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005601797.1;locus_tag=D1109_RS04170;product=ribonuclease;protein_id=WP_005608491.1;transl_table=11 NZ_CP031858.1 RefSeq gene 899206 899727 . + . ID=gene-D1109_RS04175;Name=D1109_RS04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04175;old_locus_tag=D1109_04195 NZ_CP031858.1 Protein Homology CDS 899206 899727 . + 0 ID=cds-WP_193327846.1;Parent=gene-D1109_RS04175;Dbxref=Genbank:WP_193327846.1;Name=WP_193327846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598290.1;locus_tag=D1109_RS04175;product=SprT family zinc-dependent metalloprotease;protein_id=WP_193327846.1;transl_table=11 NZ_CP031858.1 RefSeq gene 899832 901118 . + . ID=gene-D1109_RS04180;Name=D1109_RS04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04180;old_locus_tag=D1109_04200 NZ_CP031858.1 Protein Homology CDS 899832 901118 . + 0 ID=cds-WP_005615681.1;Parent=gene-D1109_RS04180;Dbxref=Genbank:WP_005615681.1;Name=WP_005615681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263161.1;locus_tag=D1109_RS04180;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_005615681.1;transl_table=11 NZ_CP031858.1 RefSeq gene 901310 903649 . - . ID=gene-D1109_RS04185;Name=D1109_RS04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04185;old_locus_tag=D1109_04205 NZ_CP031858.1 Protein Homology CDS 901310 903649 . - 0 ID=cds-WP_011848556.1;Parent=gene-D1109_RS04185;Dbxref=Genbank:WP_011848556.1;Name=WP_011848556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263162.1;locus_tag=D1109_RS04185;product=RNA-binding transcriptional accessory protein;protein_id=WP_011848556.1;transl_table=11 NZ_CP031858.1 RefSeq gene 903724 904272 . - . ID=gene-D1109_RS04190;Name=pilW;gbkey=Gene;gene=pilW;gene_biotype=protein_coding;locus_tag=D1109_RS04190;old_locus_tag=D1109_04210 NZ_CP031858.1 Protein Homology CDS 903724 904272 . - 0 ID=cds-WP_011848557.1;Parent=gene-D1109_RS04190;Dbxref=Genbank:WP_011848557.1;Name=WP_011848557.1;Ontology_term=GO:0005515;gbkey=CDS;gene=pilW;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598298.1;locus_tag=D1109_RS04190;product=type IV pilus biogenesis/stability protein PilW;protein_id=WP_011848557.1;transl_table=11 NZ_CP031858.1 RefSeq gene 904326 905507 . - . ID=gene-D1109_RS04195;Name=D1109_RS04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04195;old_locus_tag=D1109_04215 NZ_CP031858.1 Protein Homology CDS 904326 905507 . - 0 ID=cds-WP_009875290.1;Parent=gene-D1109_RS04195;Dbxref=Genbank:WP_009875290.1;Name=WP_009875290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005601805.1;locus_tag=D1109_RS04195;product=bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN;protein_id=WP_009875290.1;transl_table=11 NZ_CP031858.1 RefSeq gene 905757 905832 . - . ID=gene-D1109_RS04200;Name=D1109_RS04200;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS04200;old_locus_tag=D1109_04220 NZ_CP031858.1 tRNAscan-SE tRNA 905757 905832 . - . ID=rna-D1109_RS04200;Parent=gene-D1109_RS04200;anticodon=(pos:complement(905797..905799));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS04200;product=tRNA-Val NZ_CP031858.1 tRNAscan-SE exon 905757 905832 . - . ID=exon-D1109_RS04200-1;Parent=rna-D1109_RS04200;anticodon=(pos:complement(905797..905799));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS04200;product=tRNA-Val NZ_CP031858.1 RefSeq gene 905883 905958 . - . ID=gene-D1109_RS04205;Name=D1109_RS04205;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS04205;old_locus_tag=D1109_04225 NZ_CP031858.1 tRNAscan-SE tRNA 905883 905958 . - . ID=rna-D1109_RS04205;Parent=gene-D1109_RS04205;anticodon=(pos:complement(905923..905925));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS04205;product=tRNA-Val NZ_CP031858.1 tRNAscan-SE exon 905883 905958 . - . ID=exon-D1109_RS04205-1;Parent=rna-D1109_RS04205;anticodon=(pos:complement(905923..905925));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS04205;product=tRNA-Val NZ_CP031858.1 RefSeq gene 906009 906084 . - . ID=gene-D1109_RS04210;Name=D1109_RS04210;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS04210;old_locus_tag=D1109_04230 NZ_CP031858.1 tRNAscan-SE tRNA 906009 906084 . - . ID=rna-D1109_RS04210;Parent=gene-D1109_RS04210;anticodon=(pos:complement(906049..906051));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS04210;product=tRNA-Val NZ_CP031858.1 tRNAscan-SE exon 906009 906084 . - . ID=exon-D1109_RS04210-1;Parent=rna-D1109_RS04210;anticodon=(pos:complement(906049..906051));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS04210;product=tRNA-Val NZ_CP031858.1 RefSeq gene 906132 906207 . - . ID=gene-D1109_RS04215;Name=D1109_RS04215;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS04215;old_locus_tag=D1109_04235 NZ_CP031858.1 tRNAscan-SE tRNA 906132 906207 . - . ID=rna-D1109_RS04215;Parent=gene-D1109_RS04215;anticodon=(pos:complement(906172..906174));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS04215;product=tRNA-Val NZ_CP031858.1 tRNAscan-SE exon 906132 906207 . - . ID=exon-D1109_RS04215-1;Parent=rna-D1109_RS04215;anticodon=(pos:complement(906172..906174));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS04215;product=tRNA-Val NZ_CP031858.1 RefSeq gene 906411 907850 . + . ID=gene-D1109_RS04220;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=D1109_RS04220;old_locus_tag=D1109_04240 NZ_CP031858.1 Protein Homology CDS 906411 907850 . + 0 ID=cds-WP_005605060.1;Parent=gene-D1109_RS04220;Dbxref=Genbank:WP_005605060.1;Name=WP_005605060.1;Ontology_term=GO:0006424,GO:0004818,GO:0009332;gbkey=CDS;gene=gltX;go_component=glutamate-tRNA ligase complex|0009332||IEA;go_function=glutamate-tRNA ligase activity|0004818||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007526628.1;locus_tag=D1109_RS04220;product=glutamate--tRNA ligase;protein_id=WP_005605060.1;transl_table=11 NZ_CP031858.1 RefSeq gene 907900 907975 . + . ID=gene-D1109_RS04225;Name=D1109_RS04225;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS04225;old_locus_tag=D1109_04245 NZ_CP031858.1 tRNAscan-SE tRNA 907900 907975 . + . ID=rna-D1109_RS04225;Parent=gene-D1109_RS04225;anticodon=(pos:907933..907935);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS04225;product=tRNA-Ala NZ_CP031858.1 tRNAscan-SE exon 907900 907975 . + . ID=exon-D1109_RS04225-1;Parent=rna-D1109_RS04225;anticodon=(pos:907933..907935);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS04225;product=tRNA-Ala NZ_CP031858.1 RefSeq gene 908188 908439 . + . ID=gene-D1109_RS04230;Name=yefM;gbkey=Gene;gene=yefM;gene_biotype=protein_coding;locus_tag=D1109_RS04230;old_locus_tag=D1109_04250 NZ_CP031858.1 Protein Homology CDS 908188 908439 . + 0 ID=cds-WP_005598318.1;Parent=gene-D1109_RS04230;Dbxref=Genbank:WP_005598318.1;Name=WP_005598318.1;gbkey=CDS;gene=yefM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017357689.1;locus_tag=D1109_RS04230;product=YoeB-YefM toxin-antitoxin system antitoxin YefM;protein_id=WP_005598318.1;transl_table=11 NZ_CP031858.1 RefSeq gene 908436 908696 . + . ID=gene-D1109_RS04235;Name=D1109_RS04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04235;old_locus_tag=D1109_04255 NZ_CP031858.1 Protein Homology CDS 908436 908696 . + 0 ID=cds-WP_237611416.1;Parent=gene-D1109_RS04235;Dbxref=Genbank:WP_237611416.1;Name=WP_237611416.1;Ontology_term=GO:0008219;gbkey=CDS;go_process=cell death|0008219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651384.1;locus_tag=D1109_RS04235;product=Txe/YoeB family addiction module toxin;protein_id=WP_237611416.1;transl_table=11 NZ_CP031858.1 RefSeq pseudogene 908777 909986 . + . ID=gene-D1109_RS04240;Name=D1109_RS04240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D1109_RS04240;old_locus_tag=D1109_04260;pseudo=true NZ_CP031858.1 Protein Homology CDS 908777 909986 . + 0 ID=cds-D1109_RS04240;Parent=gene-D1109_RS04240;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612108.1;locus_tag=D1109_RS04240;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP031858.1 RefSeq gene 910152 910319 . - . ID=gene-D1109_RS04245;Name=D1109_RS04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04245;old_locus_tag=D1109_04265 NZ_CP031858.1 Protein Homology CDS 910152 910319 . - 0 ID=cds-WP_009875287.1;Parent=gene-D1109_RS04245;Dbxref=Genbank:WP_009875287.1;Name=WP_009875287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014990903.1;locus_tag=D1109_RS04245;product=Trm112 family protein;protein_id=WP_009875287.1;transl_table=11 NZ_CP031858.1 RefSeq gene 910321 911301 . - . ID=gene-D1109_RS04250;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=D1109_RS04250;old_locus_tag=D1109_04270 NZ_CP031858.1 Protein Homology CDS 910321 911301 . - 0 ID=cds-WP_237611417.1;Parent=gene-D1109_RS04250;Dbxref=Genbank:WP_237611417.1;Name=WP_237611417.1;Ontology_term=GO:0009245,GO:0009029;gbkey=CDS;gene=lpxK;go_function=tetraacyldisaccharide 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005605069.1;locus_tag=D1109_RS04250;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_237611417.1;transl_table=11 NZ_CP031858.1 RefSeq gene 911395 912654 . - . ID=gene-D1109_RS04255;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=D1109_RS04255;old_locus_tag=D1109_04275 NZ_CP031858.1 Protein Homology CDS 911395 912654 . - 0 ID=cds-WP_005598324.1;Parent=gene-D1109_RS04255;Dbxref=Genbank:WP_005598324.1;Name=WP_005598324.1;Ontology_term=GO:0006508,GO:0004252,GO:0005524,GO:0051082,GO:0009368;gbkey=CDS;gene=clpX;go_component=endopeptidase Clp complex|0009368||IEA;go_function=serine-type endopeptidase activity|0004252||IEA,ATP binding|0005524||IEA,unfolded protein binding|0051082||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005615690.1;locus_tag=D1109_RS04255;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=WP_005598324.1;transl_table=11 NZ_CP031858.1 RefSeq gene 912654 913244 . - . ID=gene-D1109_RS04260;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=D1109_RS04260;old_locus_tag=D1109_04280 NZ_CP031858.1 Protein Homology CDS 912654 913244 . - 0 ID=cds-WP_005601821.1;Parent=gene-D1109_RS04260;Dbxref=Genbank:WP_005601821.1;Name=WP_005601821.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005601821.1;locus_tag=D1109_RS04260;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_005601821.1;transl_table=11 NZ_CP031858.1 RefSeq gene 913366 913758 . + . ID=gene-D1109_RS04265;Name=D1109_RS04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04265;old_locus_tag=D1109_04285 NZ_CP031858.1 Protein Homology CDS 913366 913758 . + 0 ID=cds-WP_005620423.1;Parent=gene-D1109_RS04265;Dbxref=Genbank:WP_005620423.1;Name=WP_005620423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005620423.1;locus_tag=D1109_RS04265;product=SufE family protein;protein_id=WP_005620423.1;transl_table=11 NZ_CP031858.1 RefSeq gene 913820 913896 . - . ID=gene-D1109_RS04270;Name=D1109_RS04270;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS04270;old_locus_tag=D1109_04290 NZ_CP031858.1 tRNAscan-SE tRNA 913820 913896 . - . ID=rna-D1109_RS04270;Parent=gene-D1109_RS04270;anticodon=(pos:complement(913860..913862));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS04270;product=tRNA-Asp NZ_CP031858.1 tRNAscan-SE exon 913820 913896 . - . ID=exon-D1109_RS04270-1;Parent=rna-D1109_RS04270;anticodon=(pos:complement(913860..913862));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS04270;product=tRNA-Asp NZ_CP031858.1 RefSeq gene 913938 914014 . - . ID=gene-D1109_RS04275;Name=D1109_RS04275;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS04275;old_locus_tag=D1109_04295 NZ_CP031858.1 tRNAscan-SE tRNA 913938 914014 . - . ID=rna-D1109_RS04275;Parent=gene-D1109_RS04275;anticodon=(pos:complement(913978..913980));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS04275;product=tRNA-Asp NZ_CP031858.1 tRNAscan-SE exon 913938 914014 . - . ID=exon-D1109_RS04275-1;Parent=rna-D1109_RS04275;anticodon=(pos:complement(913978..913980));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS04275;product=tRNA-Asp NZ_CP031858.1 RefSeq gene 914117 914890 . - . ID=gene-D1109_RS04280;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=D1109_RS04280;old_locus_tag=D1109_04300 NZ_CP031858.1 Protein Homology CDS 914117 914890 . - 0 ID=cds-WP_043995337.1;Parent=gene-D1109_RS04280;Dbxref=Genbank:WP_043995337.1;Name=WP_043995337.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651391.1;locus_tag=D1109_RS04280;product=DNA polymerase III subunit epsilon;protein_id=WP_043995337.1;transl_table=11 NZ_CP031858.1 RefSeq gene 914977 916647 . - . ID=gene-D1109_RS04285;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=D1109_RS04285;old_locus_tag=D1109_04305 NZ_CP031858.1 Protein Homology CDS 914977 916647 . - 0 ID=cds-WP_237611418.1;Parent=gene-D1109_RS04285;Dbxref=Genbank:WP_237611418.1;Name=WP_237611418.1;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011608528.1;locus_tag=D1109_RS04285;product=energy-dependent translational throttle protein EttA;protein_id=WP_237611418.1;transl_table=11 NZ_CP031858.1 RefSeq gene 916812 917150 . + . ID=gene-D1109_RS04290;Name=D1109_RS04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04290;old_locus_tag=D1109_04310 NZ_CP031858.1 Protein Homology CDS 916812 917150 . + 0 ID=cds-WP_005598331.1;Parent=gene-D1109_RS04290;Dbxref=Genbank:WP_005598331.1;Name=WP_005598331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598331.1;locus_tag=D1109_RS04290;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_005598331.1;transl_table=11 NZ_CP031858.1 RefSeq gene 917143 917511 . + . ID=gene-D1109_RS04295;Name=D1109_RS04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04295;old_locus_tag=D1109_04315 NZ_CP031858.1 Protein Homology CDS 917143 917511 . + 0 ID=cds-WP_005615694.1;Parent=gene-D1109_RS04295;Dbxref=Genbank:WP_005615694.1;Name=WP_005615694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598332.1;locus_tag=D1109_RS04295;product=rhodanese-like domain-containing protein;protein_id=WP_005615694.1;transl_table=11 NZ_CP031858.1 RefSeq gene 917620 917940 . + . ID=gene-D1109_RS04300;Name=D1109_RS04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04300;old_locus_tag=D1109_04320 NZ_CP031858.1 Protein Homology CDS 917620 917940 . + 0 ID=cds-WP_005615696.1;Parent=gene-D1109_RS04300;Dbxref=Genbank:WP_005615696.1;Name=WP_005615696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005601831.1;locus_tag=D1109_RS04300;product=hypothetical protein;protein_id=WP_005615696.1;transl_table=11 NZ_CP031858.1 RefSeq gene 917998 919272 . - . ID=gene-D1109_RS04305;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=D1109_RS04305;old_locus_tag=D1109_04325 NZ_CP031858.1 Protein Homology CDS 917998 919272 . - 0 ID=cds-WP_237611419.1;Parent=gene-D1109_RS04305;Dbxref=Genbank:WP_237611419.1;Name=WP_237611419.1;Ontology_term=GO:0009252,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005601833.1;locus_tag=D1109_RS04305;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_237611419.1;transl_table=11 NZ_CP031858.1 RefSeq gene 919392 919652 . - . ID=gene-D1109_RS04310;Name=D1109_RS04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04310;old_locus_tag=D1109_04330 NZ_CP031858.1 Protein Homology CDS 919392 919652 . - 0 ID=cds-WP_005598336.1;Parent=gene-D1109_RS04310;Dbxref=Genbank:WP_005598336.1;Name=WP_005598336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598336.1;locus_tag=D1109_RS04310;product=BolA family transcriptional regulator;protein_id=WP_005598336.1;transl_table=11 NZ_CP031858.1 RefSeq gene 919665 920018 . - . ID=gene-D1109_RS04315;Name=D1109_RS04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04315;old_locus_tag=D1109_04335 NZ_CP031858.1 Protein Homology CDS 919665 920018 . - 0 ID=cds-WP_005601837.1;Parent=gene-D1109_RS04315;Dbxref=Genbank:WP_005601837.1;Name=WP_005601837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598339.1;locus_tag=D1109_RS04315;product=STAS domain-containing protein;protein_id=WP_005601837.1;transl_table=11 NZ_CP031858.1 RefSeq gene 920028 920666 . - . ID=gene-D1109_RS04320;Name=mlaC;gbkey=Gene;gene=mlaC;gene_biotype=protein_coding;locus_tag=D1109_RS04320;old_locus_tag=D1109_04340 NZ_CP031858.1 Protein Homology CDS 920028 920666 . - 0 ID=cds-WP_039709248.1;Parent=gene-D1109_RS04320;Dbxref=Genbank:WP_039709248.1;Name=WP_039709248.1;gbkey=CDS;gene=mlaC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005608517.1;locus_tag=D1109_RS04320;product=phospholipid-binding protein MlaC;protein_id=WP_039709248.1;transl_table=11 NZ_CP031858.1 RefSeq gene 920744 921271 . - . ID=gene-D1109_RS04325;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=D1109_RS04325;old_locus_tag=D1109_04345 NZ_CP031858.1 Protein Homology CDS 920744 921271 . - 0 ID=cds-WP_039709249.1;Parent=gene-D1109_RS04325;Dbxref=Genbank:WP_039709249.1;Name=WP_039709249.1;Ontology_term=GO:0015914;gbkey=CDS;gene=mlaD;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598344.1;locus_tag=D1109_RS04325;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_039709249.1;transl_table=11 NZ_CP031858.1 RefSeq gene 921290 922120 . - . ID=gene-D1109_RS04330;Name=mlaE;gbkey=Gene;gene=mlaE;gene_biotype=protein_coding;locus_tag=D1109_RS04330;old_locus_tag=D1109_04350 NZ_CP031858.1 Protein Homology CDS 921290 922120 . - 0 ID=cds-WP_215577742.1;Parent=gene-D1109_RS04330;Dbxref=Genbank:WP_215577742.1;Name=WP_215577742.1;Ontology_term=GO:0043190;gbkey=CDS;gene=mlaE;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010944294.1;locus_tag=D1109_RS04330;product=lipid asymmetry maintenance ABC transporter permease subunit MlaE;protein_id=WP_215577742.1;transl_table=11 NZ_CP031858.1 RefSeq gene 922059 922862 . - . ID=gene-D1109_RS04335;Name=mlaF;gbkey=Gene;gene=mlaF;gene_biotype=protein_coding;locus_tag=D1109_RS04335;old_locus_tag=D1109_04355 NZ_CP031858.1 Protein Homology CDS 922059 922862 . - 0 ID=cds-WP_005608520.1;Parent=gene-D1109_RS04335;Dbxref=Genbank:WP_005608520.1;Name=WP_005608520.1;Ontology_term=GO:0005524;gbkey=CDS;gene=mlaF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011848559.1;locus_tag=D1109_RS04335;product=phospholipid ABC transporter ATP-binding protein MlaF;protein_id=WP_005608520.1;transl_table=11 NZ_CP031858.1 RefSeq gene 923123 924517 . + . ID=gene-D1109_RS04340;Name=D1109_RS04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04340;old_locus_tag=D1109_04360 NZ_CP031858.1 Protein Homology CDS 923123 924517 . + 0 ID=cds-WP_237611420.1;Parent=gene-D1109_RS04340;Dbxref=Genbank:WP_237611420.1;Name=WP_237611420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005617770.1;locus_tag=D1109_RS04340;product=DegQ family serine endoprotease;protein_id=WP_237611420.1;transl_table=11 NZ_CP031858.1 RefSeq gene 924556 925443 . - . ID=gene-D1109_RS04345;Name=D1109_RS04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04345;old_locus_tag=D1109_04365 NZ_CP031858.1 Protein Homology CDS 924556 925443 . - 0 ID=cds-WP_237611421.1;Parent=gene-D1109_RS04345;Dbxref=Genbank:WP_237611421.1;Name=WP_237611421.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005617771.1;locus_tag=D1109_RS04345;product=TIGR01777 family oxidoreductase;protein_id=WP_237611421.1;transl_table=11 NZ_CP031858.1 RefSeq gene 925443 925904 . - . ID=gene-D1109_RS04350;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=D1109_RS04350;old_locus_tag=D1109_04370 NZ_CP031858.1 Protein Homology CDS 925443 925904 . - 0 ID=cds-WP_005598350.1;Parent=gene-D1109_RS04350;Dbxref=Genbank:WP_005598350.1;Name=WP_005598350.1;gbkey=CDS;gene=argR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598350.1;locus_tag=D1109_RS04350;product=transcriptional regulator ArgR;protein_id=WP_005598350.1;transl_table=11 NZ_CP031858.1 RefSeq gene 926098 927051 . + . ID=gene-D1109_RS04355;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=D1109_RS04355;old_locus_tag=D1109_04375 NZ_CP031858.1 Protein Homology CDS 926098 927051 . + 0 ID=cds-WP_237611422.1;Parent=gene-D1109_RS04355;Dbxref=Genbank:WP_237611422.1;Name=WP_237611422.1;Ontology_term=GO:0006099,GO:0030060;gbkey=CDS;gene=mdh;go_function=L-malate dehydrogenase activity|0030060||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005608524.1;locus_tag=D1109_RS04355;product=malate dehydrogenase;protein_id=WP_237611422.1;transl_table=11 NZ_CP031858.1 RefSeq gene 927141 927410 . + . ID=gene-D1109_RS04360;Name=D1109_RS04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04360;old_locus_tag=D1109_04380 NZ_CP031858.1 Protein Homology CDS 927141 927410 . + 0 ID=cds-WP_005598355.1;Parent=gene-D1109_RS04360;Dbxref=Genbank:WP_005598355.1;Name=WP_005598355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005617773.1;locus_tag=D1109_RS04360;product=hypothetical protein;protein_id=WP_005598355.1;transl_table=11 NZ_CP031858.1 RefSeq gene 927478 928128 . - . ID=gene-D1109_RS04365;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=D1109_RS04365;old_locus_tag=D1109_04385 NZ_CP031858.1 Protein Homology CDS 927478 928128 . - 0 ID=cds-WP_237611423.1;Parent=gene-D1109_RS04365;Dbxref=Genbank:WP_237611423.1;Name=WP_237611423.1;Ontology_term=GO:0006139,GO:0004017,GO:0005524;gbkey=CDS;gene=adk;go_function=adenylate kinase activity|0004017||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651406.1;locus_tag=D1109_RS04365;product=adenylate kinase;protein_id=WP_237611423.1;transl_table=11 NZ_CP031858.1 RefSeq gene 928280 930403 . - . ID=gene-D1109_RS04370;Name=D1109_RS04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04370;old_locus_tag=D1109_04390 NZ_CP031858.1 Protein Homology CDS 928280 930403 . - 0 ID=cds-WP_237611424.1;Parent=gene-D1109_RS04370;Dbxref=Genbank:WP_237611424.1;Name=WP_237611424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263170.1;locus_tag=D1109_RS04370;product=TonB-dependent receptor;protein_id=WP_237611424.1;transl_table=11 NZ_CP031858.1 RefSeq gene 930580 931860 . - . ID=gene-D1109_RS04375;Name=D1109_RS04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04375;old_locus_tag=D1109_04395 NZ_CP031858.1 Protein Homology CDS 930580 931860 . - 0 ID=cds-WP_237611425.1;Parent=gene-D1109_RS04375;Dbxref=Genbank:WP_237611425.1;Name=WP_237611425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005620408.1;locus_tag=D1109_RS04375;product=AmpG family muropeptide MFS transporter;protein_id=WP_237611425.1;transl_table=11 NZ_CP031858.1 RefSeq gene 931999 933015 . - . ID=gene-D1109_RS04380;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=D1109_RS04380;old_locus_tag=D1109_04400 NZ_CP031858.1 Protein Homology CDS 931999 933015 . - 0 ID=cds-WP_009875366.1;Parent=gene-D1109_RS04380;Dbxref=Genbank:WP_009875366.1;Name=WP_009875366.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598364.1;locus_tag=D1109_RS04380;product=UDP-glucose 4-epimerase GalE;protein_id=WP_009875366.1;transl_table=11 NZ_CP031858.1 RefSeq gene 933079 935130 . - . ID=gene-D1109_RS04385;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=D1109_RS04385;old_locus_tag=D1109_04405 NZ_CP031858.1 Protein Homology CDS 933079 935130 . - 0 ID=cds-WP_237611426.1;Parent=gene-D1109_RS04385;Dbxref=Genbank:WP_237611426.1;Name=WP_237611426.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263172.1;locus_tag=D1109_RS04385;product=NAD-dependent DNA ligase LigA;protein_id=WP_237611426.1;transl_table=11 NZ_CP031858.1 RefSeq gene 935194 936204 . - . ID=gene-D1109_RS04390;Name=zipA;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=D1109_RS04390;old_locus_tag=D1109_04410 NZ_CP031858.1 Protein Homology CDS 935194 936204 . - 0 ID=cds-WP_237611427.1;Parent=gene-D1109_RS04390;Dbxref=Genbank:WP_237611427.1;Name=WP_237611427.1;Ontology_term=GO:0000917,GO:0005515;gbkey=CDS;gene=zipA;go_function=protein binding|0005515||IEA;go_process=division septum assembly|0000917||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005617784.1;locus_tag=D1109_RS04390;product=cell division protein ZipA;protein_id=WP_237611427.1;transl_table=11 NZ_CP031858.1 RefSeq gene 936324 937205 . + . ID=gene-D1109_RS04395;Name=cysZ;gbkey=Gene;gene=cysZ;gene_biotype=protein_coding;locus_tag=D1109_RS04395;old_locus_tag=D1109_04415 NZ_CP031858.1 Protein Homology CDS 936324 937205 . + 0 ID=cds-WP_009875369.1;Parent=gene-D1109_RS04395;Dbxref=Genbank:WP_009875369.1;Name=WP_009875369.1;Ontology_term=GO:0000103,GO:0015116,GO:0005887;gbkey=CDS;gene=cysZ;go_component=integral component of plasma membrane|0005887||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598369.1;locus_tag=D1109_RS04395;product=sulfate transporter CysZ;protein_id=WP_009875369.1;transl_table=11 NZ_CP031858.1 RefSeq gene 937265 937594 . - . ID=gene-D1109_RS04400;Name=D1109_RS04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04400;old_locus_tag=D1109_04420 NZ_CP031858.1 Protein Homology CDS 937265 937594 . - 0 ID=cds-WP_009875370.1;Parent=gene-D1109_RS04400;Dbxref=Genbank:WP_009875370.1;Name=WP_009875370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014990866.1;locus_tag=D1109_RS04400;product=hypothetical protein;protein_id=WP_009875370.1;transl_table=11 NZ_CP031858.1 RefSeq gene 937687 939141 . - . ID=gene-D1109_RS04405;Name=gnd;gbkey=Gene;gene=gnd;gene_biotype=protein_coding;locus_tag=D1109_RS04405;old_locus_tag=D1109_04425 NZ_CP031858.1 Protein Homology CDS 937687 939141 . - 0 ID=cds-WP_237611428.1;Parent=gene-D1109_RS04405;Dbxref=Genbank:WP_237611428.1;Name=WP_237611428.1;Ontology_term=GO:0006098,GO:0004616;gbkey=CDS;gene=gnd;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005714317.1;locus_tag=D1109_RS04405;product=decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase;protein_id=WP_237611428.1;transl_table=11 NZ_CP031858.1 RefSeq gene 939212 939664 . - . ID=gene-D1109_RS04410;Name=D1109_RS04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04410;old_locus_tag=D1109_04430 NZ_CP031858.1 Protein Homology CDS 939212 939664 . - 0 ID=cds-WP_237611429.1;Parent=gene-D1109_RS04410;Dbxref=Genbank:WP_237611429.1;Name=WP_237611429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598376.1;locus_tag=D1109_RS04410;product=hypothetical protein;protein_id=WP_237611429.1;transl_table=11 NZ_CP031858.1 RefSeq pseudogene 939726 940748 . - . ID=gene-D1109_RS04415;Name=D1109_RS04415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D1109_RS04415;old_locus_tag=D1109_04435;pseudo=true NZ_CP031858.1 Protein Homology CDS 939726 940748 . - 0 ID=cds-D1109_RS04415;Parent=gene-D1109_RS04415;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005615719.1;locus_tag=D1109_RS04415;product=PDDEXK nuclease domain-containing protein;pseudo=true;transl_table=11 NZ_CP031858.1 RefSeq gene 940895 942217 . - . ID=gene-D1109_RS04420;Name=D1109_RS04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04420;old_locus_tag=D1109_04440 NZ_CP031858.1 Protein Homology CDS 940895 942217 . - 0 ID=cds-WP_237611430.1;Parent=gene-D1109_RS04420;Dbxref=Genbank:WP_237611430.1;Name=WP_237611430.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875375.1;locus_tag=D1109_RS04420;product=MFS transporter;protein_id=WP_237611430.1;transl_table=11 NZ_CP031858.1 RefSeq gene 942350 943048 . - . ID=gene-D1109_RS04425;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;locus_tag=D1109_RS04425;old_locus_tag=D1109_04445 NZ_CP031858.1 Protein Homology CDS 942350 943048 . - 0 ID=cds-WP_039709254.1;Parent=gene-D1109_RS04425;Dbxref=Genbank:WP_039709254.1;Name=WP_039709254.1;Ontology_term=GO:0006098,GO:0017057;gbkey=CDS;gene=pgl;go_function=6-phosphogluconolactonase activity|0017057||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005620404.1;locus_tag=D1109_RS04425;product=6-phosphogluconolactonase;protein_id=WP_039709254.1;transl_table=11 NZ_CP031858.1 RefSeq gene 943135 944622 . - . ID=gene-D1109_RS04430;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=D1109_RS04430;old_locus_tag=D1109_04450 NZ_CP031858.1 Protein Homology CDS 943135 944622 . - 0 ID=cds-WP_005615724.1;Parent=gene-D1109_RS04430;Dbxref=Genbank:WP_005615724.1;Name=WP_005615724.1;Ontology_term=GO:0006098,GO:0004345;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651427.1;locus_tag=D1109_RS04430;product=glucose-6-phosphate dehydrogenase;protein_id=WP_005615724.1;transl_table=11 NZ_CP031858.1 RefSeq gene 944694 945509 . - . ID=gene-D1109_RS04435;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=D1109_RS04435;old_locus_tag=D1109_04455 NZ_CP031858.1 Protein Homology CDS 944694 945509 . - 0 ID=cds-WP_005598390.1;Parent=gene-D1109_RS04435;Dbxref=Genbank:WP_005598390.1;Name=WP_005598390.1;Ontology_term=GO:0006790,GO:0008441;gbkey=CDS;gene=cysQ;go_function=3'(2')%2C5'-bisphosphate nucleotidase activity|0008441||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875377.1;locus_tag=D1109_RS04435;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=WP_005598390.1;transl_table=11 NZ_CP031858.1 RefSeq gene 945522 946079 . - . ID=gene-D1109_RS04440;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=D1109_RS04440;old_locus_tag=D1109_04460 NZ_CP031858.1 Protein Homology CDS 945522 946079 . - 0 ID=cds-WP_005605124.1;Parent=gene-D1109_RS04440;Dbxref=Genbank:WP_005605124.1;Name=WP_005605124.1;gbkey=CDS;gene=nudE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011848566.1;locus_tag=D1109_RS04440;product=ADP compounds hydrolase NudE;protein_id=WP_005605124.1;transl_table=11 NZ_CP031858.1 RefSeq gene 946222 946626 . + . ID=gene-D1109_RS04445;Name=hslR;gbkey=Gene;gene=hslR;gene_biotype=protein_coding;locus_tag=D1109_RS04445;old_locus_tag=D1109_04465 NZ_CP031858.1 Protein Homology CDS 946222 946626 . + 0 ID=cds-WP_005598394.1;Parent=gene-D1109_RS04445;Dbxref=Genbank:WP_005598394.1;Name=WP_005598394.1;gbkey=CDS;gene=hslR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598394.1;locus_tag=D1109_RS04445;product=ribosome-associated heat shock protein Hsp15;protein_id=WP_005598394.1;transl_table=11 NZ_CP031858.1 RefSeq gene 946757 947647 . + . ID=gene-D1109_RS04450;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=D1109_RS04450;old_locus_tag=D1109_04470 NZ_CP031858.1 Protein Homology CDS 946757 947647 . + 0 ID=cds-WP_005618814.1;Parent=gene-D1109_RS04450;Dbxref=Genbank:WP_005618814.1;Name=WP_005618814.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012478523.1;locus_tag=D1109_RS04450;product=Hsp33 family molecular chaperone HslO;protein_id=WP_005618814.1;transl_table=11 NZ_CP031858.1 RefSeq gene 947715 949049 . - . ID=gene-D1109_RS04455;Name=D1109_RS04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04455;old_locus_tag=D1109_04475 NZ_CP031858.1 Protein Homology CDS 947715 949049 . - 0 ID=cds-WP_005598398.1;Parent=gene-D1109_RS04455;Dbxref=Genbank:WP_005598398.1;Name=WP_005598398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005617788.1;locus_tag=D1109_RS04455;product=anaerobic C4-dicarboxylate transporter;protein_id=WP_005598398.1;transl_table=11 NZ_CP031858.1 RefSeq gene 949902 950906 . + . ID=gene-D1109_RS04460;Name=D1109_RS04460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04460;old_locus_tag=D1109_04485 NZ_CP031858.1 Protein Homology CDS 949902 950906 . + 0 ID=cds-WP_237611431.1;Parent=gene-D1109_RS04460;Dbxref=Genbank:WP_237611431.1;Name=WP_237611431.1;Ontology_term=GO:0006520,GO:0006591,GO:0004585,GO:0016597;gbkey=CDS;go_function=ornithine carbamoyltransferase activity|0004585||IEA,amino acid binding|0016597||IEA;go_process=cellular amino acid metabolic process|0006520||IEA,ornithine metabolic process|0006591||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005651072.1;locus_tag=D1109_RS04460;product=ornithine carbamoyltransferase;protein_id=WP_237611431.1;transl_table=11 NZ_CP031858.1 RefSeq gene 950928 951875 . + . ID=gene-D1109_RS04465;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=D1109_RS04465;old_locus_tag=D1109_04490 NZ_CP031858.1 Protein Homology CDS 950928 951875 . + 0 ID=cds-WP_237592616.1;Parent=gene-D1109_RS04465;Dbxref=Genbank:WP_237592616.1;Name=WP_237592616.1;Ontology_term=GO:0006520,GO:0008804;gbkey=CDS;gene=arcC;go_function=carbamate kinase activity|0008804||IEA;go_process=cellular amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014992133.1;locus_tag=D1109_RS04465;product=carbamate kinase;protein_id=WP_237592616.1;transl_table=11 NZ_CP031858.1 RefSeq gene 952123 953544 . - . ID=gene-D1109_RS04470;Name=D1109_RS04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04470;old_locus_tag=D1109_04495 NZ_CP031858.1 Protein Homology CDS 952123 953544 . - 0 ID=cds-WP_005605131.1;Parent=gene-D1109_RS04470;Dbxref=Genbank:WP_005605131.1;Name=WP_005605131.1;Ontology_term=GO:0009401,GO:0008982,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005605131.1;locus_tag=D1109_RS04470;product=sucrose-specific PTS transporter subunit IIBC;protein_id=WP_005605131.1;transl_table=11 NZ_CP031858.1 RefSeq gene 953735 954379 . - . ID=gene-D1109_RS04475;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=D1109_RS04475;old_locus_tag=D1109_04500 NZ_CP031858.1 Protein Homology CDS 953735 954379 . - 0 ID=cds-WP_005598404.1;Parent=gene-D1109_RS04475;Dbxref=Genbank:WP_005598404.1;Name=WP_005598404.1;Ontology_term=GO:0015888,GO:0030974,GO:0005524,GO:0048502,GO:0009898,GO:0055052;gbkey=CDS;gene=thiQ;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ABC-type thiamine transporter activity|0048502||IEA;go_process=thiamine transport|0015888||IEA,thiamine pyrophosphate transmembrane transport|0030974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005608553.1;locus_tag=D1109_RS04475;product=thiamine ABC transporter ATP-binding protein;protein_id=WP_005598404.1;transl_table=11 NZ_CP031858.1 RefSeq gene 954376 956001 . - . ID=gene-D1109_RS04480;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;locus_tag=D1109_RS04480;old_locus_tag=D1109_04505 NZ_CP031858.1 Protein Homology CDS 954376 956001 . - 0 ID=cds-WP_237611432.1;Parent=gene-D1109_RS04480;Dbxref=Genbank:WP_237611432.1;Name=WP_237611432.1;gbkey=CDS;gene=thiP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598405.1;locus_tag=D1109_RS04480;product=thiamine/thiamine pyrophosphate ABC transporter permease ThiP;protein_id=WP_237611432.1;transl_table=11 NZ_CP031858.1 RefSeq gene 956238 956495 . + . ID=gene-D1109_RS04485;Name=ptsH;gbkey=Gene;gene=ptsH;gene_biotype=protein_coding;locus_tag=D1109_RS04485;old_locus_tag=D1109_04510 NZ_CP031858.1 Protein Homology CDS 956238 956495 . + 0 ID=cds-WP_005598406.1;Parent=gene-D1109_RS04485;Dbxref=Genbank:WP_005598406.1;Name=WP_005598406.1;gbkey=CDS;gene=ptsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038086.1;locus_tag=D1109_RS04485;product=phosphocarrier protein Hpr;protein_id=WP_005598406.1;transl_table=11 NZ_CP031858.1 RefSeq gene 956619 958340 . + . ID=gene-D1109_RS04490;Name=ptsI;gbkey=Gene;gene=ptsI;gene_biotype=protein_coding;locus_tag=D1109_RS04490;old_locus_tag=D1109_04515 NZ_CP031858.1 Protein Homology CDS 956619 958340 . + 0 ID=cds-WP_237611433.1;Parent=gene-D1109_RS04490;Dbxref=Genbank:WP_237611433.1;Name=WP_237611433.1;gbkey=CDS;gene=ptsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014992137.1;locus_tag=D1109_RS04490;product=phosphoenolpyruvate-protein phosphotransferase PtsI;protein_id=WP_237611433.1;transl_table=11 NZ_CP031858.1 RefSeq gene 958425 958925 . + . ID=gene-D1109_RS04495;Name=crr;gbkey=Gene;gene=crr;gene_biotype=protein_coding;locus_tag=D1109_RS04495;old_locus_tag=D1109_04520 NZ_CP031858.1 Protein Homology CDS 958425 958925 . + 0 ID=cds-WP_005598408.1;Parent=gene-D1109_RS04495;Dbxref=Genbank:WP_005598408.1;Name=WP_005598408.1;gbkey=CDS;gene=crr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005702996.1;locus_tag=D1109_RS04495;product=PTS glucose transporter subunit IIA;protein_id=WP_005598408.1;transl_table=11 NZ_CP031858.1 RefSeq gene 959110 960537 . + . ID=gene-D1109_RS04500;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=D1109_RS04500;old_locus_tag=D1109_04525 NZ_CP031858.1 Protein Homology CDS 959110 960537 . + 0 ID=cds-WP_005617789.1;Parent=gene-D1109_RS04500;Dbxref=Genbank:WP_005617789.1;Name=WP_005617789.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005617789.1;locus_tag=D1109_RS04500;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_005617789.1;transl_table=11 NZ_CP031858.1 RefSeq gene 960767 962965 . + . ID=gene-D1109_RS04505;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;gene_synonym=mutU,recL;locus_tag=D1109_RS04505;old_locus_tag=D1109_04530 NZ_CP031858.1 Protein Homology CDS 960767 962965 . + 0 ID=cds-WP_237611434.1;Parent=gene-D1109_RS04505;Dbxref=Genbank:WP_237611434.1;Name=WP_237611434.1;Ontology_term=GO:0006268,GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=uvrD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA unwinding involved in DNA replication|0006268||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005608557.1;locus_tag=D1109_RS04505;product=DNA helicase II;protein_id=WP_237611434.1;transl_table=11 NZ_CP031858.1 RefSeq gene 963169 963978 . + . ID=gene-D1109_RS04510;Name=hypB;gbkey=Gene;gene=hypB;gene_biotype=protein_coding;locus_tag=D1109_RS04510;old_locus_tag=D1109_04535 NZ_CP031858.1 Protein Homology CDS 963169 963978 . + 0 ID=cds-WP_005598416.1;Parent=gene-D1109_RS04510;Dbxref=Genbank:WP_005598416.1;Name=WP_005598416.1;Ontology_term=GO:0051604,GO:0003924,GO:0016151;gbkey=CDS;gene=hypB;go_function=GTPase activity|0003924||IEA,nickel cation binding|0016151||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005619316.1;locus_tag=D1109_RS04510;product=hydrogenase nickel incorporation protein HypB;protein_id=WP_005598416.1;transl_table=11 NZ_CP031858.1 RefSeq gene 963990 965105 . + . ID=gene-D1109_RS04515;Name=hypD;gbkey=Gene;gene=hypD;gene_biotype=protein_coding;locus_tag=D1109_RS04515;old_locus_tag=D1109_04540 NZ_CP031858.1 Protein Homology CDS 963990 965105 . + 0 ID=cds-WP_237611435.1;Parent=gene-D1109_RS04515;Dbxref=Genbank:WP_237611435.1;Name=WP_237611435.1;Ontology_term=GO:0006464,GO:0016530;gbkey=CDS;gene=hypD;go_function=metallochaperone activity|0016530||IEA;go_process=cellular protein modification process|0006464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598419.1;locus_tag=D1109_RS04515;product=hydrogenase formation protein HypD;protein_id=WP_237611435.1;transl_table=11 NZ_CP031858.1 RefSeq gene 965107 966120 . + . ID=gene-D1109_RS04520;Name=hypE;gbkey=Gene;gene=hypE;gene_biotype=protein_coding;locus_tag=D1109_RS04520;old_locus_tag=D1109_04545 NZ_CP031858.1 Protein Homology CDS 965107 966120 . + 0 ID=cds-WP_005615743.1;Parent=gene-D1109_RS04520;Dbxref=Genbank:WP_005615743.1;Name=WP_005615743.1;gbkey=CDS;gene=hypE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001059922.1;locus_tag=D1109_RS04520;product=hydrogenase expression/formation protein HypE;protein_id=WP_005615743.1;transl_table=11 NZ_CP031858.1 RefSeq gene 966200 968485 . - . ID=gene-D1109_RS04525;Name=hypF;gbkey=Gene;gene=hypF;gene_biotype=protein_coding;locus_tag=D1109_RS04525;old_locus_tag=D1109_04550 NZ_CP031858.1 Protein Homology CDS 966200 968485 . - 0 ID=cds-WP_237611436.1;Parent=gene-D1109_RS04525;Dbxref=Genbank:WP_237611436.1;Name=WP_237611436.1;Ontology_term=GO:0006464,GO:0003998;gbkey=CDS;gene=hypF;go_function=acylphosphatase activity|0003998||IEA;go_process=cellular protein modification process|0006464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598424.1;locus_tag=D1109_RS04525;product=carbamoyltransferase HypF;protein_id=WP_237611436.1;transl_table=11 NZ_CP031858.1 RefSeq gene 968720 969862 . + . ID=gene-D1109_RS04530;Name=hybO;gbkey=Gene;gene=hybO;gene_biotype=protein_coding;locus_tag=D1109_RS04530;old_locus_tag=D1109_04555 NZ_CP031858.1 Protein Homology CDS 968720 969862 . + 0 ID=cds-WP_005601918.1;Parent=gene-D1109_RS04530;Dbxref=Genbank:WP_005601918.1;Name=WP_005601918.1;gbkey=CDS;gene=hybO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011848570.1;locus_tag=D1109_RS04530;product=hydrogenase 2 small subunit;protein_id=WP_005601918.1;transl_table=11 NZ_CP031858.1 RefSeq gene 969855 970892 . + . ID=gene-D1109_RS04535;Name=hybA;gbkey=Gene;gene=hybA;gene_biotype=protein_coding;locus_tag=D1109_RS04535;old_locus_tag=D1109_04560 NZ_CP031858.1 Protein Homology CDS 969855 970892 . + 0 ID=cds-WP_237611437.1;Parent=gene-D1109_RS04535;Dbxref=Genbank:WP_237611437.1;Name=WP_237611437.1;gbkey=CDS;gene=hybA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005601920.1;locus_tag=D1109_RS04535;product=hydrogenase 2 operon protein HybA;protein_id=WP_237611437.1;transl_table=11 NZ_CP031858.1 RefSeq gene 970885 972066 . + . ID=gene-D1109_RS04540;Name=hybB;gbkey=Gene;gene=hybB;gene_biotype=protein_coding;locus_tag=D1109_RS04540;old_locus_tag=D1109_04565 NZ_CP031858.1 Protein Homology CDS 970885 972066 . + 0 ID=cds-WP_005601922.1;Parent=gene-D1109_RS04540;Dbxref=Genbank:WP_005601922.1;Name=WP_005601922.1;gbkey=CDS;gene=hybB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598431.1;locus_tag=D1109_RS04540;product=Ni/Fe-hydrogenase cytochrome b subunit;protein_id=WP_005601922.1;transl_table=11 NZ_CP031858.1 RefSeq gene 972063 973772 . + . ID=gene-D1109_RS04545;Name=hybC;gbkey=Gene;gene=hybC;gene_biotype=protein_coding;locus_tag=D1109_RS04545;old_locus_tag=D1109_04570 NZ_CP031858.1 Protein Homology CDS 972063 973772 . + 0 ID=cds-WP_005598432.1;Parent=gene-D1109_RS04545;Dbxref=Genbank:WP_005598432.1;Name=WP_005598432.1;Ontology_term=GO:0008901;gbkey=CDS;gene=hybC;go_function=ferredoxin hydrogenase activity|0008901||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005617799.1;locus_tag=D1109_RS04545;product=hydrogenase 2 large subunit;protein_id=WP_005598432.1;transl_table=11 NZ_CP031858.1 RefSeq gene 973772 974269 . + . ID=gene-D1109_RS04550;Name=D1109_RS04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04550;old_locus_tag=D1109_04575 NZ_CP031858.1 Protein Homology CDS 973772 974269 . + 0 ID=cds-WP_005598434.1;Parent=gene-D1109_RS04550;Dbxref=Genbank:WP_005598434.1;Name=WP_005598434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005610523.1;locus_tag=D1109_RS04550;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=WP_005598434.1;transl_table=11 NZ_CP031858.1 RefSeq gene 974262 974765 . + . ID=gene-D1109_RS04555;Name=hybE;gbkey=Gene;gene=hybE;gene_biotype=protein_coding;locus_tag=D1109_RS04555;old_locus_tag=D1109_04580 NZ_CP031858.1 Protein Homology CDS 974262 974765 . + 0 ID=cds-WP_012263187.1;Parent=gene-D1109_RS04555;Dbxref=Genbank:WP_012263187.1;Name=WP_012263187.1;gbkey=CDS;gene=hybE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017357826.1;locus_tag=D1109_RS04555;product=hydrogenase-2 assembly chaperone;protein_id=WP_012263187.1;transl_table=11 NZ_CP031858.1 RefSeq gene 974793 975071 . + . ID=gene-D1109_RS04560;Name=hybG;gbkey=Gene;gene=hybG;gene_biotype=protein_coding;locus_tag=D1109_RS04560;old_locus_tag=D1109_04585 NZ_CP031858.1 Protein Homology CDS 974793 975071 . + 0 ID=cds-WP_005598438.1;Parent=gene-D1109_RS04560;Dbxref=Genbank:WP_005598438.1;Name=WP_005598438.1;gbkey=CDS;gene=hybG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598438.1;locus_tag=D1109_RS04560;product=hydrogenase maturation factor HybG;protein_id=WP_005598438.1;transl_table=11 NZ_CP031858.1 RefSeq gene 975166 975507 . - . ID=gene-D1109_RS04565;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=D1109_RS04565;old_locus_tag=D1109_04590 NZ_CP031858.1 Protein Homology CDS 975166 975507 . - 0 ID=cds-WP_237611438.1;Parent=gene-D1109_RS04565;Dbxref=Genbank:WP_237611438.1;Name=WP_237611438.1;Ontology_term=GO:0006464,GO:0008901;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA;go_process=cellular protein modification process|0006464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005614036.1;locus_tag=D1109_RS04565;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_237611438.1;transl_table=11 NZ_CP031858.1 RefSeq gene 975637 975712 . - . ID=gene-D1109_RS04570;Name=D1109_RS04570;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS04570;old_locus_tag=D1109_04595 NZ_CP031858.1 tRNAscan-SE tRNA 975637 975712 . - . ID=rna-D1109_RS04570;Parent=gene-D1109_RS04570;anticodon=(pos:complement(975677..975679));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS04570;product=tRNA-Gly NZ_CP031858.1 tRNAscan-SE exon 975637 975712 . - . ID=exon-D1109_RS04570-1;Parent=rna-D1109_RS04570;anticodon=(pos:complement(975677..975679));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS04570;product=tRNA-Gly NZ_CP031858.1 RefSeq gene 975759 975845 . - . ID=gene-D1109_RS04575;Name=D1109_RS04575;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS04575;old_locus_tag=D1109_04600 NZ_CP031858.1 tRNAscan-SE tRNA 975759 975845 . - . ID=rna-D1109_RS04575;Parent=gene-D1109_RS04575;anticodon=(pos:complement(975809..975811));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS04575;product=tRNA-Leu NZ_CP031858.1 tRNAscan-SE exon 975759 975845 . - . ID=exon-D1109_RS04575-1;Parent=rna-D1109_RS04575;anticodon=(pos:complement(975809..975811));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS04575;product=tRNA-Leu NZ_CP031858.1 RefSeq gene 975878 975964 . - . ID=gene-D1109_RS04580;Name=D1109_RS04580;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS04580;old_locus_tag=D1109_04605 NZ_CP031858.1 tRNAscan-SE tRNA 975878 975964 . - . ID=rna-D1109_RS04580;Parent=gene-D1109_RS04580;anticodon=(pos:complement(975928..975930));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS04580;product=tRNA-Leu NZ_CP031858.1 tRNAscan-SE exon 975878 975964 . - . ID=exon-D1109_RS04580-1;Parent=rna-D1109_RS04580;anticodon=(pos:complement(975928..975930));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS04580;product=tRNA-Leu NZ_CP031858.1 RefSeq gene 975987 976062 . - . ID=gene-D1109_RS04585;Name=D1109_RS04585;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS04585;old_locus_tag=D1109_04610 NZ_CP031858.1 tRNAscan-SE tRNA 975987 976062 . - . ID=rna-D1109_RS04585;Parent=gene-D1109_RS04585;anticodon=(pos:complement(976027..976029));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS04585;product=tRNA-Gly NZ_CP031858.1 tRNAscan-SE exon 975987 976062 . - . ID=exon-D1109_RS04585-1;Parent=rna-D1109_RS04585;anticodon=(pos:complement(976027..976029));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS04585;product=tRNA-Gly NZ_CP031858.1 RefSeq gene 976089 976175 . - . ID=gene-D1109_RS04590;Name=D1109_RS04590;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS04590;old_locus_tag=D1109_04615 NZ_CP031858.1 tRNAscan-SE tRNA 976089 976175 . - . ID=rna-D1109_RS04590;Parent=gene-D1109_RS04590;anticodon=(pos:complement(976139..976141));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS04590;product=tRNA-Leu NZ_CP031858.1 tRNAscan-SE exon 976089 976175 . - . ID=exon-D1109_RS04590-1;Parent=rna-D1109_RS04590;anticodon=(pos:complement(976139..976141));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS04590;product=tRNA-Leu NZ_CP031858.1 RefSeq gene 976187 976262 . - . ID=gene-D1109_RS04595;Name=D1109_RS04595;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS04595;old_locus_tag=D1109_04620 NZ_CP031858.1 tRNAscan-SE tRNA 976187 976262 . - . ID=rna-D1109_RS04595;Parent=gene-D1109_RS04595;anticodon=(pos:complement(976227..976229));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS04595;product=tRNA-Gly NZ_CP031858.1 tRNAscan-SE exon 976187 976262 . - . ID=exon-D1109_RS04595-1;Parent=rna-D1109_RS04595;anticodon=(pos:complement(976227..976229));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS04595;product=tRNA-Gly NZ_CP031858.1 RefSeq gene 976430 979879 . - . ID=gene-D1109_RS04600;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=D1109_RS04600;old_locus_tag=D1109_04625 NZ_CP031858.1 Protein Homology CDS 976430 979879 . - 0 ID=cds-WP_237611439.1;Parent=gene-D1109_RS04600;Dbxref=Genbank:WP_237611439.1;Name=WP_237611439.1;Ontology_term=GO:0006281,GO:0003676,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598442.1;locus_tag=D1109_RS04600;product=transcription-repair coupling factor;protein_id=WP_237611439.1;transl_table=11 NZ_CP031858.1 RefSeq gene 979981 982590 . + . ID=gene-D1109_RS04605;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=D1109_RS04605;old_locus_tag=D1109_04630 NZ_CP031858.1 Protein Homology CDS 979981 982590 . + 0 ID=cds-WP_009874910.1;Parent=gene-D1109_RS04605;Dbxref=Genbank:WP_009874910.1;Name=WP_009874910.1;Ontology_term=GO:0006508,GO:0004177,GO:0008237;gbkey=CDS;gene=pepN;go_function=aminopeptidase activity|0004177||IEA,metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874910.1;locus_tag=D1109_RS04605;product=aminopeptidase N;protein_id=WP_009874910.1;transl_table=11 NZ_CP031858.1 RefSeq gene 982728 983318 . - . ID=gene-D1109_RS04610;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=D1109_RS04610;old_locus_tag=D1109_04635 NZ_CP031858.1 Protein Homology CDS 982728 983318 . - 0 ID=cds-WP_005598446.1;Parent=gene-D1109_RS04610;Dbxref=Genbank:WP_005598446.1;Name=WP_005598446.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005608576.1;locus_tag=D1109_RS04610;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_005598446.1;transl_table=11 NZ_CP031858.1 RefSeq gene 983390 983743 . + . ID=gene-D1109_RS04615;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=D1109_RS04615;old_locus_tag=D1109_04640 NZ_CP031858.1 Protein Homology CDS 983390 983743 . + 0 ID=cds-WP_005598448.1;Parent=gene-D1109_RS04615;Dbxref=Genbank:WP_005598448.1;Name=WP_005598448.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598448.1;locus_tag=D1109_RS04615;product=dihydroneopterin aldolase;protein_id=WP_005598448.1;transl_table=11 NZ_CP031858.1 RefSeq gene 983852 984745 . + . ID=gene-D1109_RS04620;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=D1109_RS04620;old_locus_tag=D1109_04645 NZ_CP031858.1 Protein Homology CDS 983852 984745 . + 0 ID=cds-WP_005598450.1;Parent=gene-D1109_RS04620;Dbxref=Genbank:WP_005598450.1;Name=WP_005598450.1;Ontology_term=GO:0009972,GO:0004126;gbkey=CDS;gene=cdd;go_function=cytidine deaminase activity|0004126||IEA;go_process=cytidine deamination|0009972||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598450.1;locus_tag=D1109_RS04620;product=cytidine deaminase;protein_id=WP_005598450.1;transl_table=11 NZ_CP031858.1 RefSeq gene 984792 985730 . - . ID=gene-D1109_RS04625;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=D1109_RS04625;old_locus_tag=D1109_04650 NZ_CP031858.1 Protein Homology CDS 984792 985730 . - 0 ID=cds-WP_005598452.1;Parent=gene-D1109_RS04625;Dbxref=Genbank:WP_005598452.1;Name=WP_005598452.1;Ontology_term=GO:0000910;gbkey=CDS;gene=ftsX;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005612829.1;locus_tag=D1109_RS04625;product=permease-like cell division protein FtsX;protein_id=WP_005598452.1;transl_table=11 NZ_CP031858.1 RefSeq gene 985740 986393 . - . ID=gene-D1109_RS04630;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=D1109_RS04630;old_locus_tag=D1109_04655 NZ_CP031858.1 Protein Homology CDS 985740 986393 . - 0 ID=cds-WP_005598455.1;Parent=gene-D1109_RS04630;Dbxref=Genbank:WP_005598455.1;Name=WP_005598455.1;Ontology_term=GO:0000910,GO:0006810,GO:0005524;gbkey=CDS;gene=ftsE;go_function=ATP binding|0005524||IEA;go_process=cytokinesis|0000910||IEA,transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015674492.1;locus_tag=D1109_RS04630;product=cell division ATP-binding protein FtsE;protein_id=WP_005598455.1;transl_table=11 NZ_CP031858.1 RefSeq gene 986484 988217 . - . ID=gene-D1109_RS04635;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=D1109_RS04635;old_locus_tag=D1109_04660 NZ_CP031858.1 Protein Homology CDS 986484 988217 . - 0 ID=cds-WP_237611440.1;Parent=gene-D1109_RS04635;Dbxref=Genbank:WP_237611440.1;Name=WP_237611440.1;Ontology_term=GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874912.1;locus_tag=D1109_RS04635;product=signal recognition particle-docking protein FtsY;protein_id=WP_237611440.1;transl_table=11 NZ_CP031858.1 RefSeq gene 988295 988888 . + . ID=gene-D1109_RS04640;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=D1109_RS04640;old_locus_tag=D1109_04665 NZ_CP031858.1 Protein Homology CDS 988295 988888 . + 0 ID=cds-WP_005605185.1;Parent=gene-D1109_RS04640;Dbxref=Genbank:WP_005605185.1;Name=WP_005605185.1;Ontology_term=GO:0031167,GO:0052913;gbkey=CDS;gene=rsmD;go_function=16S rRNA (guanine(966)-N(2))-methyltransferase activity|0052913||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652587.1;locus_tag=D1109_RS04640;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=WP_005605185.1;transl_table=11 NZ_CP031858.1 RefSeq gene 988953 989264 . + . ID=gene-D1109_RS04645;Name=D1109_RS04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04645;old_locus_tag=D1109_04670 NZ_CP031858.1 Protein Homology CDS 988953 989264 . + 0 ID=cds-WP_005598462.1;Parent=gene-D1109_RS04645;Dbxref=Genbank:WP_005598462.1;Name=WP_005598462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598462.1;locus_tag=D1109_RS04645;product=HI1450 family dsDNA-mimic protein;protein_id=WP_005598462.1;transl_table=11 NZ_CP031858.1 RefSeq gene 989280 989792 . + . ID=gene-D1109_RS04650;Name=hpaC;gbkey=Gene;gene=hpaC;gene_biotype=protein_coding;locus_tag=D1109_RS04650;old_locus_tag=D1109_04675 NZ_CP031858.1 Protein Homology CDS 989280 989792 . + 0 ID=cds-WP_005608583.1;Parent=gene-D1109_RS04650;Dbxref=Genbank:WP_005608583.1;Name=WP_005608583.1;Ontology_term=GO:0018660;gbkey=CDS;gene=hpaC;go_function=4-hydroxyphenylacetate%2CNADH:oxygen oxidoreductase (3-hydroxylating) activity|0018660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005608583.1;locus_tag=D1109_RS04650;product=4-hydroxyphenylacetate 3-monooxygenase%2C reductase component;protein_id=WP_005608583.1;transl_table=11 NZ_CP031858.1 RefSeq gene 989907 990779 . + . ID=gene-D1109_RS04655;Name=tehB;gbkey=Gene;gene=tehB;gene_biotype=protein_coding;locus_tag=D1109_RS04655;old_locus_tag=D1109_04680 NZ_CP031858.1 Protein Homology CDS 989907 990779 . + 0 ID=cds-WP_005612832.1;Parent=gene-D1109_RS04655;Dbxref=Genbank:WP_005612832.1;Name=WP_005612832.1;Ontology_term=GO:0046690,GO:0008757;gbkey=CDS;gene=tehB;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=response to tellurium ion|0046690||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005601944.1;locus_tag=D1109_RS04655;product=SAM-dependent methyltransferase TehB;protein_id=WP_005612832.1;transl_table=11 NZ_CP031858.1 RefSeq gene 990907 991590 . - . ID=gene-D1109_RS04660;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=D1109_RS04660;old_locus_tag=D1109_04685 NZ_CP031858.1 Protein Homology CDS 990907 991590 . - 0 ID=cds-WP_005608586.1;Parent=gene-D1109_RS04660;Dbxref=Genbank:WP_005608586.1;Name=WP_005608586.1;Ontology_term=GO:0071705,GO:0022857,GO:0016021,GO:0043190;gbkey=CDS;gene=artM;go_component=integral component of membrane|0016021||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005601946.1;locus_tag=D1109_RS04660;product=arginine ABC transporter permease ArtM;protein_id=WP_005608586.1;transl_table=11 NZ_CP031858.1 RefSeq gene 991590 992261 . - . ID=gene-D1109_RS04665;Name=artQ;gbkey=Gene;gene=artQ;gene_biotype=protein_coding;locus_tag=D1109_RS04665;old_locus_tag=D1109_04690 NZ_CP031858.1 Protein Homology CDS 991590 992261 . - 0 ID=cds-WP_005612835.1;Parent=gene-D1109_RS04665;Dbxref=Genbank:WP_005612835.1;Name=WP_005612835.1;Ontology_term=GO:0055085,GO:0071705,GO:0022857,GO:0016021,GO:0043190;gbkey=CDS;gene=artQ;go_component=integral component of membrane|0016021||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA,nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005612835.1;locus_tag=D1109_RS04665;product=arginine ABC transporter permease ArtQ;protein_id=WP_005612835.1;transl_table=11 NZ_CP031858.1 RefSeq gene 992267 992986 . - . ID=gene-D1109_RS04670;Name=D1109_RS04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04670;old_locus_tag=D1109_04695 NZ_CP031858.1 Protein Homology CDS 992267 992986 . - 0 ID=cds-WP_011848574.1;Parent=gene-D1109_RS04670;Dbxref=Genbank:WP_011848574.1;Name=WP_011848574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015674485.1;locus_tag=D1109_RS04670;product=transporter substrate-binding domain-containing protein;protein_id=WP_011848574.1;transl_table=11 NZ_CP031858.1 RefSeq gene 993006 993740 . - . ID=gene-D1109_RS04675;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=D1109_RS04675;old_locus_tag=D1109_04700 NZ_CP031858.1 Protein Homology CDS 993006 993740 . - 0 ID=cds-WP_005598473.1;Parent=gene-D1109_RS04675;Dbxref=Genbank:WP_005598473.1;Name=WP_005598473.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=artP;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007523332.1;locus_tag=D1109_RS04675;product=arginine ABC transporter ATP-binding protein ArtP;protein_id=WP_005598473.1;transl_table=11 NZ_CP031858.1 RefSeq gene 993965 994462 . - . ID=gene-D1109_RS04680;Name=D1109_RS04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04680;old_locus_tag=D1109_04705 NZ_CP031858.1 Protein Homology CDS 993965 994462 . - 0 ID=cds-WP_005601953.1;Parent=gene-D1109_RS04680;Dbxref=Genbank:WP_005601953.1;Name=WP_005601953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015674483.1;locus_tag=D1109_RS04680;product=YbhB/YbcL family Raf kinase inhibitor-like protein;protein_id=WP_005601953.1;transl_table=11 NZ_CP031858.1 RefSeq gene 994535 995497 . + . ID=gene-D1109_RS04685;Name=D1109_RS04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04685;old_locus_tag=D1109_04710 NZ_CP031858.1 Protein Homology CDS 994535 995497 . + 0 ID=cds-WP_005619672.1;Parent=gene-D1109_RS04685;Dbxref=Genbank:WP_005619672.1;Name=WP_005619672.1;Ontology_term=GO:0098662,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_process=inorganic cation transmembrane transport|0098662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012478528.1;locus_tag=D1109_RS04685;product=calcium/sodium antiporter;protein_id=WP_005619672.1;transl_table=11 NZ_CP031858.1 RefSeq gene 995575 995868 . - . ID=gene-D1109_RS04690;Name=D1109_RS04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04690;old_locus_tag=D1109_04715 NZ_CP031858.1 Protein Homology CDS 995575 995868 . - 0 ID=cds-WP_005598477.1;Parent=gene-D1109_RS04690;Dbxref=Genbank:WP_005598477.1;Name=WP_005598477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598477.1;locus_tag=D1109_RS04690;product=helix-turn-helix domain-containing protein;protein_id=WP_005598477.1;transl_table=11 NZ_CP031858.1 RefSeq gene 995849 996220 . - . ID=gene-D1109_RS04695;Name=D1109_RS04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04695;old_locus_tag=D1109_04720 NZ_CP031858.1 Protein Homology CDS 995849 996220 . - 0 ID=cds-WP_005619674.1;Parent=gene-D1109_RS04695;Dbxref=Genbank:WP_005619674.1;Name=WP_005619674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005619674.1;locus_tag=D1109_RS04695;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_005619674.1;transl_table=11 NZ_CP031858.1 RefSeq gene 996413 998164 . + . ID=gene-D1109_RS04700;Name=D1109_RS04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04700;old_locus_tag=D1109_04725 NZ_CP031858.1 Protein Homology CDS 996413 998164 . + 0 ID=cds-WP_237611441.1;Parent=gene-D1109_RS04700;Dbxref=Genbank:WP_237611441.1;Name=WP_237611441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005601957.1;locus_tag=D1109_RS04700;product=protein-disulfide reductase DsbD;protein_id=WP_237611441.1;transl_table=11 NZ_CP031858.1 RefSeq gene 998222 998791 . + . ID=gene-D1109_RS04705;Name=D1109_RS04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04705;old_locus_tag=D1109_04730 NZ_CP031858.1 Protein Homology CDS 998222 998791 . + 0 ID=cds-WP_005601959.1;Parent=gene-D1109_RS04705;Dbxref=Genbank:WP_005601959.1;Name=WP_005601959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005821628.1;locus_tag=D1109_RS04705;product=elongation factor P hydroxylase;protein_id=WP_005601959.1;transl_table=11 NZ_CP031858.1 RefSeq gene 998835 999689 . - . ID=gene-D1109_RS04710;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=D1109_RS04710;old_locus_tag=D1109_04735 NZ_CP031858.1 Protein Homology CDS 998835 999689 . - 0 ID=cds-WP_009874917.1;Parent=gene-D1109_RS04710;Dbxref=Genbank:WP_009874917.1;Name=WP_009874917.1;Ontology_term=GO:0000451,GO:0008649,GO:0008757;gbkey=CDS;gene=rsmI;go_function=rRNA methyltransferase activity|0008649||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=rRNA 2'-O-methylation|0000451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598486.1;locus_tag=D1109_RS04710;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_009874917.1;transl_table=11 NZ_CP031858.1 RefSeq gene 999762 1001510 . + . ID=gene-D1109_RS04715;Name=D1109_RS04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04715;old_locus_tag=D1109_04740 NZ_CP031858.1 Protein Homology CDS 999762 1001510 . + 0 ID=cds-WP_237611442.1;Parent=gene-D1109_RS04715;Dbxref=Genbank:WP_237611442.1;Name=WP_237611442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005605209.1;locus_tag=D1109_RS04715;product=penicillin-binding protein activator;protein_id=WP_237611442.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1001485 1001856 . + . ID=gene-D1109_RS04720;Name=D1109_RS04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04720;old_locus_tag=D1109_04745 NZ_CP031858.1 Protein Homology CDS 1001485 1001856 . + 0 ID=cds-WP_005598490.1;Parent=gene-D1109_RS04720;Dbxref=Genbank:WP_005598490.1;Name=WP_005598490.1;Ontology_term=GO:0003676,GO:0004518;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598490.1;locus_tag=D1109_RS04720;product=YraN family protein;protein_id=WP_005598490.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1001865 1002443 . + . ID=gene-D1109_RS04725;Name=D1109_RS04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04725;old_locus_tag=D1109_04750 NZ_CP031858.1 Protein Homology CDS 1001865 1002443 . + 0 ID=cds-WP_005598492.1;Parent=gene-D1109_RS04725;Dbxref=Genbank:WP_005598492.1;Name=WP_005598492.1;Ontology_term=GO:1901135;gbkey=CDS;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652572.1;locus_tag=D1109_RS04725;product=SIS domain-containing protein;protein_id=WP_005598492.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1002465 1003052 . + . ID=gene-D1109_RS04730;Name=yraP;gbkey=Gene;gene=yraP;gene_biotype=protein_coding;locus_tag=D1109_RS04730;old_locus_tag=D1109_04755 NZ_CP031858.1 Protein Homology CDS 1002465 1003052 . + 0 ID=cds-WP_005598495.1;Parent=gene-D1109_RS04730;Dbxref=Genbank:WP_005598495.1;Name=WP_005598495.1;gbkey=CDS;gene=yraP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598495.1;locus_tag=D1109_RS04730;product=divisome-associated lipoprotein YraP;protein_id=WP_005598495.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1003122 1003259 . - . ID=gene-D1109_RS04735;Name=D1109_RS04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04735 NZ_CP031858.1 Protein Homology CDS 1003122 1003259 . - 0 ID=cds-WP_005598497.1;Parent=gene-D1109_RS04735;Dbxref=Genbank:WP_005598497.1;Name=WP_005598497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598497.1;locus_tag=D1109_RS04735;product=hypothetical protein;protein_id=WP_005598497.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1003264 1004715 . - . ID=gene-D1109_RS04740;Name=mltF;gbkey=Gene;gene=mltF;gene_biotype=protein_coding;locus_tag=D1109_RS04740;old_locus_tag=D1109_04760 NZ_CP031858.1 Protein Homology CDS 1003264 1004715 . - 0 ID=cds-WP_237611443.1;Parent=gene-D1109_RS04740;Dbxref=Genbank:WP_237611443.1;Name=WP_237611443.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltF;go_component=membrane|0016020||IEA;go_function=lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005612849.1;locus_tag=D1109_RS04740;product=membrane-bound lytic murein transglycosylase MltF;protein_id=WP_237611443.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1004877 1004953 . - . ID=gene-D1109_RS04745;Name=D1109_RS04745;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS04745;old_locus_tag=D1109_04765 NZ_CP031858.1 tRNAscan-SE tRNA 1004877 1004953 . - . ID=rna-D1109_RS04745;Parent=gene-D1109_RS04745;anticodon=(pos:complement(1004917..1004919));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS04745;product=tRNA-Arg NZ_CP031858.1 tRNAscan-SE exon 1004877 1004953 . - . ID=exon-D1109_RS04745-1;Parent=rna-D1109_RS04745;anticodon=(pos:complement(1004917..1004919));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS04745;product=tRNA-Arg NZ_CP031858.1 RefSeq gene 1005026 1005102 . - . ID=gene-D1109_RS04750;Name=D1109_RS04750;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS04750;old_locus_tag=D1109_04770 NZ_CP031858.1 tRNAscan-SE tRNA 1005026 1005102 . - . ID=rna-D1109_RS04750;Parent=gene-D1109_RS04750;anticodon=(pos:complement(1005066..1005068));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS04750;product=tRNA-Arg NZ_CP031858.1 tRNAscan-SE exon 1005026 1005102 . - . ID=exon-D1109_RS04750-1;Parent=rna-D1109_RS04750;anticodon=(pos:complement(1005066..1005068));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS04750;product=tRNA-Arg NZ_CP031858.1 RefSeq gene 1005116 1005210 . - . ID=gene-D1109_RS04755;Name=D1109_RS04755;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS04755;old_locus_tag=D1109_04775 NZ_CP031858.1 tRNAscan-SE tRNA 1005116 1005210 . - . ID=rna-D1109_RS04755;Parent=gene-D1109_RS04755;anticodon=(pos:complement(1005173..1005175));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS04755;product=tRNA-Ser NZ_CP031858.1 tRNAscan-SE exon 1005116 1005210 . - . ID=exon-D1109_RS04755-1;Parent=rna-D1109_RS04755;anticodon=(pos:complement(1005173..1005175));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS04755;product=tRNA-Ser NZ_CP031858.1 RefSeq gene 1005502 1007451 . - . ID=gene-D1109_RS04760;Name=D1109_RS04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04760;old_locus_tag=D1109_04780 NZ_CP031858.1 Protein Homology CDS 1005502 1007451 . - 0 ID=cds-WP_005598502.1;Parent=gene-D1109_RS04760;Dbxref=Genbank:WP_005598502.1;Name=WP_005598502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005612851.1;locus_tag=D1109_RS04760;product=heme lyase CcmF/NrfE family subunit;protein_id=WP_005598502.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1007451 1007996 . - . ID=gene-D1109_RS04765;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=D1109_RS04765;old_locus_tag=D1109_04785 NZ_CP031858.1 Protein Homology CDS 1007451 1007996 . - 0 ID=cds-WP_009874921.1;Parent=gene-D1109_RS04765;Dbxref=Genbank:WP_009874921.1;Name=WP_009874921.1;Ontology_term=GO:0017004,GO:0020037,GO:0005886;gbkey=CDS;gene=ccmE;go_component=plasma membrane|0005886||IEA;go_function=heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005601970.1;locus_tag=D1109_RS04765;product=cytochrome c maturation protein CcmE;protein_id=WP_009874921.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1008180 1008377 . - . ID=gene-D1109_RS04770;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=D1109_RS04770;old_locus_tag=D1109_04790 NZ_CP031858.1 Protein Homology CDS 1008180 1008377 . - 0 ID=cds-WP_005598506.1;Parent=gene-D1109_RS04770;Dbxref=Genbank:WP_005598506.1;Name=WP_005598506.1;Ontology_term=GO:0015886,GO:0017004,GO:0016021;gbkey=CDS;gene=ccmD;go_component=integral component of membrane|0016021||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263199.1;locus_tag=D1109_RS04770;product=heme exporter protein CcmD;protein_id=WP_005598506.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1008390 1009121 . - . ID=gene-D1109_RS04775;Name=D1109_RS04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04775;old_locus_tag=D1109_04795 NZ_CP031858.1 Protein Homology CDS 1008390 1009121 . - 0 ID=cds-WP_009874922.1;Parent=gene-D1109_RS04775;Dbxref=Genbank:WP_009874922.1;Name=WP_009874922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598508.1;locus_tag=D1109_RS04775;product=heme ABC transporter permease;protein_id=WP_009874922.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1009172 1009834 . - . ID=gene-D1109_RS04780;Name=ccmB;gbkey=Gene;gene=ccmB;gene_biotype=protein_coding;locus_tag=D1109_RS04780;old_locus_tag=D1109_04800 NZ_CP031858.1 Protein Homology CDS 1009172 1009834 . - 0 ID=cds-WP_005615770.1;Parent=gene-D1109_RS04780;Dbxref=Genbank:WP_005615770.1;Name=WP_005615770.1;Ontology_term=GO:0015886,GO:0015232;gbkey=CDS;gene=ccmB;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005709035.1;locus_tag=D1109_RS04780;product=heme exporter protein CcmB;protein_id=WP_005615770.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1009831 1010466 . - . ID=gene-D1109_RS04785;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=D1109_RS04785;old_locus_tag=D1109_04805 NZ_CP031858.1 Protein Homology CDS 1009831 1010466 . - 0 ID=cds-WP_005598510.1;Parent=gene-D1109_RS04785;Dbxref=Genbank:WP_005598510.1;Name=WP_005598510.1;Ontology_term=GO:0017004,GO:0005524,GO:0022857;gbkey=CDS;gene=ccmA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005615772.1;locus_tag=D1109_RS04785;product=cytochrome c biogenesis heme-transporting ATPase CcmA;protein_id=WP_005598510.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1010607 1011317 . - . ID=gene-D1109_RS04790;Name=hda;gbkey=Gene;gene=hda;gene_biotype=protein_coding;locus_tag=D1109_RS04790;old_locus_tag=D1109_04810 NZ_CP031858.1 Protein Homology CDS 1010607 1011317 . - 0 ID=cds-WP_005598511.1;Parent=gene-D1109_RS04790;Dbxref=Genbank:WP_005598511.1;Name=WP_005598511.1;Ontology_term=GO:0032297,GO:0016818;gbkey=CDS;gene=hda;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=negative regulation of DNA-dependent DNA replication initiation|0032297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015674467.1;locus_tag=D1109_RS04790;product=DnaA regulatory inactivator Hda;protein_id=WP_005598511.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1011556 1011671 . - . ID=gene-D1109_RS04795;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=D1109_RS04795;old_locus_tag=D1109_04815 NZ_CP031858.1 cmsearch rRNA 1011556 1011671 . - . ID=rna-D1109_RS04795;Parent=gene-D1109_RS04795;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D1109_RS04795;product=5S ribosomal RNA NZ_CP031858.1 cmsearch exon 1011556 1011671 . - . ID=exon-D1109_RS04795-1;Parent=rna-D1109_RS04795;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D1109_RS04795;product=5S ribosomal RNA NZ_CP031858.1 RefSeq gene 1011831 1014732 . - . ID=gene-D1109_RS04800;Name=D1109_RS04800;gbkey=Gene;gene_biotype=rRNA;locus_tag=D1109_RS04800;old_locus_tag=D1109_04820 NZ_CP031858.1 cmsearch rRNA 1011831 1014732 . - . ID=rna-D1109_RS04800;Parent=gene-D1109_RS04800;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D1109_RS04800;product=23S ribosomal RNA NZ_CP031858.1 cmsearch exon 1011831 1014732 . - . ID=exon-D1109_RS04800-1;Parent=rna-D1109_RS04800;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D1109_RS04800;product=23S ribosomal RNA NZ_CP031858.1 RefSeq gene 1014999 1015074 . - . ID=gene-D1109_RS04805;Name=D1109_RS04805;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS04805;old_locus_tag=D1109_04825 NZ_CP031858.1 tRNAscan-SE tRNA 1014999 1015074 . - . ID=rna-D1109_RS04805;Parent=gene-D1109_RS04805;anticodon=(pos:complement(1015039..1015041));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS04805;product=tRNA-Ala NZ_CP031858.1 tRNAscan-SE exon 1014999 1015074 . - . ID=exon-D1109_RS04805-1;Parent=rna-D1109_RS04805;anticodon=(pos:complement(1015039..1015041));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS04805;product=tRNA-Ala NZ_CP031858.1 RefSeq gene 1015126 1015202 . - . ID=gene-D1109_RS04810;Name=D1109_RS04810;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS04810;old_locus_tag=D1109_04830 NZ_CP031858.1 tRNAscan-SE tRNA 1015126 1015202 . - . ID=rna-D1109_RS04810;Parent=gene-D1109_RS04810;anticodon=(pos:complement(1015166..1015168));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS04810;product=tRNA-Ile NZ_CP031858.1 tRNAscan-SE exon 1015126 1015202 . - . ID=exon-D1109_RS04810-1;Parent=rna-D1109_RS04810;anticodon=(pos:complement(1015166..1015168));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS04810;product=tRNA-Ile NZ_CP031858.1 RefSeq gene 1015285 1016826 . - . ID=gene-D1109_RS04815;Name=D1109_RS04815;gbkey=Gene;gene_biotype=rRNA;locus_tag=D1109_RS04815;old_locus_tag=D1109_04835 NZ_CP031858.1 cmsearch rRNA 1015285 1016826 . - . ID=rna-D1109_RS04815;Parent=gene-D1109_RS04815;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D1109_RS04815;product=16S ribosomal RNA NZ_CP031858.1 cmsearch exon 1015285 1016826 . - . ID=exon-D1109_RS04815-1;Parent=rna-D1109_RS04815;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D1109_RS04815;product=16S ribosomal RNA NZ_CP031858.1 RefSeq gene 1017311 1018144 . + . ID=gene-D1109_RS04820;Name=D1109_RS04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04820;old_locus_tag=D1109_04840 NZ_CP031858.1 Protein Homology CDS 1017311 1018144 . + 0 ID=cds-WP_011848578.1;Parent=gene-D1109_RS04820;Dbxref=Genbank:WP_011848578.1;Name=WP_011848578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011848578.1;locus_tag=D1109_RS04820;product=DUF5718 family protein;protein_id=WP_011848578.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1018326 1018583 . + . ID=gene-D1109_RS04825;Name=D1109_RS04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04825;old_locus_tag=D1109_04845 NZ_CP031858.1 Protein Homology CDS 1018326 1018583 . + 0 ID=cds-WP_005618986.1;Parent=gene-D1109_RS04825;Dbxref=Genbank:WP_005618986.1;Name=WP_005618986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005717937.1;locus_tag=D1109_RS04825;product=oxaloacetate decarboxylase subunit gamma;protein_id=WP_005618986.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1018599 1020407 . + . ID=gene-D1109_RS04830;Name=oadA;gbkey=Gene;gene=oadA;gene_biotype=protein_coding;locus_tag=D1109_RS04830;old_locus_tag=D1109_04850 NZ_CP031858.1 Protein Homology CDS 1018599 1020407 . + 0 ID=cds-WP_237611444.1;Parent=gene-D1109_RS04830;Dbxref=Genbank:WP_237611444.1;Name=WP_237611444.1;Ontology_term=GO:0006814,GO:0008948,GO:0015081;gbkey=CDS;gene=oadA;go_function=oxaloacetate decarboxylase activity|0008948||IEA,sodium ion transmembrane transporter activity|0015081||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005608604.1;locus_tag=D1109_RS04830;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;protein_id=WP_237611444.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1020424 1021728 . + . ID=gene-D1109_RS04835;Name=D1109_RS04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04835;old_locus_tag=D1109_04855 NZ_CP031858.1 Protein Homology CDS 1020424 1021728 . + 0 ID=cds-WP_009875456.1;Parent=gene-D1109_RS04835;Dbxref=Genbank:WP_009875456.1;Name=WP_009875456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005605232.1;locus_tag=D1109_RS04835;product=sodium ion-translocating decarboxylase subunit beta;protein_id=WP_009875456.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1021861 1022184 . + . ID=gene-D1109_RS04840;Name=D1109_RS04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04840;old_locus_tag=D1109_04860 NZ_CP031858.1 Protein Homology CDS 1021861 1022184 . + 0 ID=cds-WP_237611445.1;Parent=gene-D1109_RS04840;Dbxref=Genbank:WP_237611445.1;Name=WP_237611445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005621693.1;locus_tag=D1109_RS04840;product=alkylphosphonate utilization protein;protein_id=WP_237611445.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1022356 1023756 . + . ID=gene-D1109_RS04845;Name=D1109_RS04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04845;old_locus_tag=D1109_04865 NZ_CP031858.1 Protein Homology CDS 1022356 1023756 . + 0 ID=cds-WP_005598534.1;Parent=gene-D1109_RS04845;Dbxref=Genbank:WP_005598534.1;Name=WP_005598534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015674408.1;locus_tag=D1109_RS04845;product=cytochrome-c peroxidase;protein_id=WP_005598534.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1023822 1024115 . - . ID=gene-D1109_RS04850;Name=yggU;gbkey=Gene;gene=yggU;gene_biotype=protein_coding;locus_tag=D1109_RS04850;old_locus_tag=D1109_04870 NZ_CP031858.1 Protein Homology CDS 1023822 1024115 . - 0 ID=cds-WP_005598536.1;Parent=gene-D1109_RS04850;Dbxref=Genbank:WP_005598536.1;Name=WP_005598536.1;gbkey=CDS;gene=yggU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005617857.1;locus_tag=D1109_RS04850;product=DUF167 family protein YggU;protein_id=WP_005598536.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1024117 1024650 . - . ID=gene-D1109_RS04855;Name=D1109_RS04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04855;old_locus_tag=D1109_04875 NZ_CP031858.1 Protein Homology CDS 1024117 1024650 . - 0 ID=cds-WP_005598538.1;Parent=gene-D1109_RS04855;Dbxref=Genbank:WP_005598538.1;Name=WP_005598538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263204.1;locus_tag=D1109_RS04855;product=YggT family protein;protein_id=WP_005598538.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1024772 1025113 . - . ID=gene-D1109_RS04860;Name=D1109_RS04860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04860;old_locus_tag=D1109_04880 NZ_CP031858.1 Protein Homology CDS 1024772 1025113 . - 0 ID=cds-WP_005598541.1;Parent=gene-D1109_RS04860;Dbxref=Genbank:WP_005598541.1;Name=WP_005598541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652361.1;locus_tag=D1109_RS04860;product=YggL family protein;protein_id=WP_005598541.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1025169 1025921 . - . ID=gene-D1109_RS04865;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=D1109_RS04865;old_locus_tag=D1109_04885 NZ_CP031858.1 Protein Homology CDS 1025169 1025921 . - 0 ID=cds-WP_005601989.1;Parent=gene-D1109_RS04865;Dbxref=Genbank:WP_005601989.1;Name=WP_005601989.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine-N7-)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005601989.1;locus_tag=D1109_RS04865;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_005601989.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1025969 1026919 . - . ID=gene-D1109_RS04870;Name=D1109_RS04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04870;old_locus_tag=D1109_04890 NZ_CP031858.1 Protein Homology CDS 1025969 1026919 . - 0 ID=cds-WP_237611446.1;Parent=gene-D1109_RS04870;Dbxref=Genbank:WP_237611446.1;Name=WP_237611446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000288132.1;locus_tag=D1109_RS04870;product=ketoacyl-ACP synthase III;protein_id=WP_237611446.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1026931 1027965 . - . ID=gene-D1109_RS04875;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=D1109_RS04875;old_locus_tag=D1109_04895 NZ_CP031858.1 Protein Homology CDS 1026931 1027965 . - 0 ID=cds-WP_005598546.1;Parent=gene-D1109_RS04875;Dbxref=Genbank:WP_005598546.1;Name=WP_005598546.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005601993.1;locus_tag=D1109_RS04875;product=phosphate acyltransferase PlsX;protein_id=WP_005598546.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1027990 1028160 . - . ID=gene-D1109_RS04880;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=D1109_RS04880;old_locus_tag=D1109_04900 NZ_CP031858.1 Protein Homology CDS 1027990 1028160 . - 0 ID=cds-WP_005598552.1;Parent=gene-D1109_RS04880;Dbxref=Genbank:WP_005598552.1;Name=WP_005598552.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmF;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006231206.1;locus_tag=D1109_RS04880;product=50S ribosomal protein L32;protein_id=WP_005598552.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1028179 1028703 . - . ID=gene-D1109_RS04885;Name=yceD;gbkey=Gene;gene=yceD;gene_biotype=protein_coding;locus_tag=D1109_RS04885;old_locus_tag=D1109_04905 NZ_CP031858.1 Protein Homology CDS 1028179 1028703 . - 0 ID=cds-WP_005598555.1;Parent=gene-D1109_RS04885;Dbxref=Genbank:WP_005598555.1;Name=WP_005598555.1;gbkey=CDS;gene=yceD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005621677.1;locus_tag=D1109_RS04885;product=23S rRNA accumulation protein YceD;protein_id=WP_005598555.1;transl_table=11 NZ_CP031858.1 RefSeq pseudogene 1028923 1029715 . + . ID=gene-D1109_RS04890;Name=ccsA;gbkey=Gene;gene=ccsA;gene_biotype=pseudogene;locus_tag=D1109_RS04890;old_locus_tag=D1109_04910;pseudo=true NZ_CP031858.1 Protein Homology CDS 1028923 1029715 . + 0 ID=cds-D1109_RS04890;Parent=gene-D1109_RS04890;Note=frameshifted;Ontology_term=GO:0017004;gbkey=CDS;gene=ccsA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598557.1;locus_tag=D1109_RS04890;product=cytochrome c biogenesis protein CcsA;pseudo=true;transl_table=11 NZ_CP031858.1 RefSeq gene 1029811 1031073 . + . ID=gene-D1109_RS04895;Name=D1109_RS04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04895;old_locus_tag=D1109_04915 NZ_CP031858.1 Protein Homology CDS 1029811 1031073 . + 0 ID=cds-WP_012263207.1;Parent=gene-D1109_RS04895;Dbxref=Genbank:WP_012263207.1;Name=WP_012263207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263207.1;locus_tag=D1109_RS04895;product=HlyC/CorC family transporter;protein_id=WP_012263207.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1031452 1032966 . + . ID=gene-D1109_RS04900;Name=D1109_RS04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04900;old_locus_tag=D1109_04920 NZ_CP031858.1 Protein Homology CDS 1031452 1032966 . + 0 ID=cds-WP_005598562.1;Parent=gene-D1109_RS04900;Dbxref=Genbank:WP_005598562.1;Name=WP_005598562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598562.1;locus_tag=D1109_RS04900;product=sodium-dependent transporter;protein_id=WP_005598562.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1032977 1033069 . + . ID=gene-D1109_RS04905;Name=D1109_RS04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04905;old_locus_tag=D1109_04925 NZ_CP031858.1 Protein Homology CDS 1032977 1033069 . + 0 ID=cds-WP_005618985.1;Parent=gene-D1109_RS04905;Dbxref=Genbank:WP_005618985.1;Name=WP_005618985.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028261.2;locus_tag=D1109_RS04905;product=methionine/alanine import family NSS transporter small subunit;protein_id=WP_005618985.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1033354 1034325 . + . ID=gene-D1109_RS04910;Name=manX;gbkey=Gene;gene=manX;gene_biotype=protein_coding;locus_tag=D1109_RS04910;old_locus_tag=D1109_04930 NZ_CP031858.1 Protein Homology CDS 1033354 1034325 . + 0 ID=cds-WP_011848580.1;Parent=gene-D1109_RS04910;Dbxref=Genbank:WP_011848580.1;Name=WP_011848580.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;gene=manX;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005612905.1;locus_tag=D1109_RS04910;product=PTS mannose transporter subunit IIAB;protein_id=WP_011848580.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1034338 1035138 . + . ID=gene-D1109_RS04915;Name=D1109_RS04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04915;old_locus_tag=D1109_04935 NZ_CP031858.1 Protein Homology CDS 1034338 1035138 . + 0 ID=cds-WP_005598566.1;Parent=gene-D1109_RS04915;Dbxref=Genbank:WP_005598566.1;Name=WP_005598566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005716709.1;locus_tag=D1109_RS04915;product=PTS mannose/fructose/sorbose transporter subunit IIC;protein_id=WP_005598566.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1035152 1035988 . + . ID=gene-D1109_RS04920;Name=D1109_RS04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04920;old_locus_tag=D1109_04940 NZ_CP031858.1 Protein Homology CDS 1035152 1035988 . + 0 ID=cds-WP_005598569.1;Parent=gene-D1109_RS04920;Dbxref=Genbank:WP_005598569.1;Name=WP_005598569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005564636.1;locus_tag=D1109_RS04920;product=PTS mannose transporter subunit IID;protein_id=WP_005598569.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1036087 1036545 . + . ID=gene-D1109_RS04925;Name=D1109_RS04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04925;old_locus_tag=D1109_04945 NZ_CP031858.1 Protein Homology CDS 1036087 1036545 . + 0 ID=cds-WP_005618984.1;Parent=gene-D1109_RS04925;Dbxref=Genbank:WP_005618984.1;Name=WP_005618984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618984.1;locus_tag=D1109_RS04925;product=DUF986 family protein;protein_id=WP_005618984.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1036542 1037747 . + . ID=gene-D1109_RS04930;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=D1109_RS04930;old_locus_tag=D1109_04950 NZ_CP031858.1 Protein Homology CDS 1036542 1037747 . + 0 ID=cds-WP_237611447.1;Parent=gene-D1109_RS04930;Dbxref=Genbank:WP_237611447.1;Name=WP_237611447.1;Ontology_term=GO:0005975,GO:0004476;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005602007.1;locus_tag=D1109_RS04930;product=mannose-6-phosphate isomerase%2C class I;protein_id=WP_237611447.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1037809 1038324 . + . ID=gene-D1109_RS04935;Name=D1109_RS04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04935;old_locus_tag=D1109_04955 NZ_CP031858.1 Protein Homology CDS 1037809 1038324 . + 0 ID=cds-WP_005605308.1;Parent=gene-D1109_RS04935;Dbxref=Genbank:WP_005605308.1;Name=WP_005605308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005605308.1;locus_tag=D1109_RS04935;product=hypothetical protein;protein_id=WP_005605308.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1038775 1039251 . - . ID=gene-D1109_RS04940;Name=D1109_RS04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04940 NZ_CP031858.1 GeneMarkS-2+ CDS 1038775 1039251 . - 0 ID=cds-WP_237611448.1;Parent=gene-D1109_RS04940;Dbxref=Genbank:WP_237611448.1;Name=WP_237611448.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=D1109_RS04940;product=transposase;protein_id=WP_237611448.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1039479 1040213 . - . ID=gene-D1109_RS04945;Name=D1109_RS04945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04945;old_locus_tag=D1109_04965 NZ_CP031858.1 Protein Homology CDS 1039479 1040213 . - 0 ID=cds-WP_011848602.1;Parent=gene-D1109_RS04945;Dbxref=Genbank:WP_011848602.1;Name=WP_011848602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011848602.1;locus_tag=D1109_RS04945;product=glutathione peroxidase;protein_id=WP_011848602.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1040339 1041232 . + . ID=gene-D1109_RS04950;Name=oxyR;gbkey=Gene;gene=oxyR;gene_biotype=protein_coding;locus_tag=D1109_RS04950;old_locus_tag=D1109_04970 NZ_CP031858.1 Protein Homology CDS 1040339 1041232 . + 0 ID=cds-WP_005598715.1;Parent=gene-D1109_RS04950;Dbxref=Genbank:WP_005598715.1;Name=WP_005598715.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=oxyR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005613039.1;locus_tag=D1109_RS04950;product=DNA-binding transcriptional regulator OxyR;protein_id=WP_005598715.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1041225 1041857 . + . ID=gene-D1109_RS04955;Name=fabR;gbkey=Gene;gene=fabR;gene_biotype=protein_coding;locus_tag=D1109_RS04955;old_locus_tag=D1109_04975 NZ_CP031858.1 Protein Homology CDS 1041225 1041857 . + 0 ID=cds-WP_005598713.1;Parent=gene-D1109_RS04955;Dbxref=Genbank:WP_005598713.1;Name=WP_005598713.1;Ontology_term=GO:0003677;gbkey=CDS;gene=fabR;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598713.1;locus_tag=D1109_RS04955;product=HTH-type transcriptional repressor FabR;protein_id=WP_005598713.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1041857 1042372 . + . ID=gene-D1109_RS04960;Name=D1109_RS04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04960;old_locus_tag=D1109_04980 NZ_CP031858.1 Protein Homology CDS 1041857 1042372 . + 0 ID=cds-WP_005618991.1;Parent=gene-D1109_RS04960;Dbxref=Genbank:WP_005618991.1;Name=WP_005618991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875050.1;locus_tag=D1109_RS04960;product=protein disulfide oxidoreductase;protein_id=WP_005618991.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1042440 1044797 . + . ID=gene-D1109_RS04965;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=D1109_RS04965;old_locus_tag=D1109_04985 NZ_CP031858.1 Protein Homology CDS 1042440 1044797 . + 0 ID=cds-WP_005608752.1;Parent=gene-D1109_RS04965;Dbxref=Genbank:WP_005608752.1;Name=WP_005608752.1;Ontology_term=GO:0016070,GO:0004540;gbkey=CDS;gene=rnr;go_function=ribonuclease activity|0004540||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005602130.1;locus_tag=D1109_RS04965;product=ribonuclease R;protein_id=WP_005608752.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1044911 1045375 . + . ID=gene-D1109_RS04970;Name=D1109_RS04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS04970;old_locus_tag=D1109_04990 NZ_CP031858.1 Protein Homology CDS 1044911 1045375 . + 0 ID=cds-WP_005598709.1;Parent=gene-D1109_RS04970;Dbxref=Genbank:WP_005598709.1;Name=WP_005598709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005608750.1;locus_tag=D1109_RS04970;product=hypothetical protein;protein_id=WP_005598709.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1045720 1046910 . + . ID=gene-D1109_RS04975;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=D1109_RS04975;old_locus_tag=D1109_04995 NZ_CP031858.1 Protein Homology CDS 1045720 1046910 . + 0 ID=cds-WP_005613035.1;Parent=gene-D1109_RS04975;Dbxref=Genbank:WP_005613035.1;Name=WP_005613035.1;Ontology_term=GO:0006437,GO:0004831;gbkey=CDS;gene=tyrS;go_function=tyrosine-tRNA ligase activity|0004831||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010944663.1;locus_tag=D1109_RS04975;product=tyrosine--tRNA ligase;protein_id=WP_005613035.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1047062 1048921 . - . ID=gene-D1109_RS04980;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=D1109_RS04980;old_locus_tag=D1109_05000 NZ_CP031858.1 Protein Homology CDS 1047062 1048921 . - 0 ID=cds-WP_005613029.1;Parent=gene-D1109_RS04980;Dbxref=Genbank:WP_005613029.1;Name=WP_005613029.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012478535.1;locus_tag=D1109_RS04980;product=RNA polymerase sigma factor RpoD;protein_id=WP_005613029.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1049026 1050768 . - . ID=gene-D1109_RS04985;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=D1109_RS04985;old_locus_tag=D1109_05005 NZ_CP031858.1 Protein Homology CDS 1049026 1050768 . - 0 ID=cds-WP_237611449.1;Parent=gene-D1109_RS04985;Dbxref=Genbank:WP_237611449.1;Name=WP_237611449.1;Ontology_term=GO:0006269,GO:0003896;gbkey=CDS;gene=dnaG;go_function=DNA primase activity|0003896||IEA;go_process=DNA replication%2C synthesis of RNA primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652356.1;locus_tag=D1109_RS04985;product=DNA primase;protein_id=WP_237611449.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1050948 1051163 . - . ID=gene-D1109_RS04990;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=D1109_RS04990;old_locus_tag=D1109_05010 NZ_CP031858.1 Protein Homology CDS 1050948 1051163 . - 0 ID=cds-WP_005598703.1;Parent=gene-D1109_RS04990;Dbxref=Genbank:WP_005598703.1;Name=WP_005598703.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsU;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011235429.1;locus_tag=D1109_RS04990;product=30S ribosomal protein S21;protein_id=WP_005598703.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1051384 1052457 . - . ID=gene-D1109_RS04995;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=D1109_RS04995;old_locus_tag=D1109_05015 NZ_CP031858.1 Protein Homology CDS 1051384 1052457 . - 0 ID=cds-WP_005613025.1;Parent=gene-D1109_RS04995;Dbxref=Genbank:WP_005613025.1;Name=WP_005613025.1;Ontology_term=GO:0009243,GO:0019305,GO:0008460;gbkey=CDS;gene=rfbB;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005613025.1;locus_tag=D1109_RS04995;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_005613025.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1052540 1053958 . - . ID=gene-D1109_RS05000;Name=wbaP;gbkey=Gene;gene=wbaP;gene_biotype=protein_coding;locus_tag=D1109_RS05000;old_locus_tag=D1109_05020 NZ_CP031858.1 Protein Homology CDS 1052540 1053958 . - 0 ID=cds-WP_011848601.1;Parent=gene-D1109_RS05000;Dbxref=Genbank:WP_011848601.1;Name=WP_011848601.1;Ontology_term=GO:0000271,GO:0016021;gbkey=CDS;gene=wbaP;go_component=integral component of membrane|0016021||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005655767.1;locus_tag=D1109_RS05000;product=undecaprenyl-phosphate galactose phosphotransferase WbaP;protein_id=WP_011848601.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1053977 1054750 . - . ID=gene-D1109_RS05005;Name=D1109_RS05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05005;old_locus_tag=D1109_05025 NZ_CP031858.1 Protein Homology CDS 1053977 1054750 . - 0 ID=cds-WP_009875047.1;Parent=gene-D1109_RS05005;Dbxref=Genbank:WP_009875047.1;Name=WP_009875047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005615838.1;locus_tag=D1109_RS05005;product=DUF4422 domain-containing protein;protein_id=WP_009875047.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1054756 1055679 . - . ID=gene-D1109_RS05010;Name=D1109_RS05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05010;old_locus_tag=D1109_05030 NZ_CP031858.1 Protein Homology CDS 1054756 1055679 . - 0 ID=cds-WP_237611450.1;Parent=gene-D1109_RS05010;Dbxref=Genbank:WP_237611450.1;Name=WP_237611450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005613019.1;locus_tag=D1109_RS05010;product=glycosyltransferase family 2 protein;protein_id=WP_237611450.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1055676 1056245 . - . ID=gene-D1109_RS05015;Name=D1109_RS05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05015;old_locus_tag=D1109_05035 NZ_CP031858.1 Protein Homology CDS 1055676 1056245 . - 0 ID=cds-WP_009875045.1;Parent=gene-D1109_RS05015;Dbxref=Genbank:WP_009875045.1;Name=WP_009875045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005613017.1;locus_tag=D1109_RS05015;product=GTP pyrophosphokinase;protein_id=WP_009875045.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1056308 1057456 . - . ID=gene-D1109_RS05020;Name=glf;gbkey=Gene;gene=glf;gene_biotype=protein_coding;locus_tag=D1109_RS05020;old_locus_tag=D1109_05040 NZ_CP031858.1 Protein Homology CDS 1056308 1057456 . - 0 ID=cds-WP_009875044.1;Parent=gene-D1109_RS05020;Dbxref=Genbank:WP_009875044.1;Name=WP_009875044.1;Ontology_term=GO:0009273,GO:0008767;gbkey=CDS;gene=glf;go_function=UDP-galactopyranose mutase activity|0008767||IEA;go_process=peptidoglycan-based cell wall biogenesis|0009273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875044.1;locus_tag=D1109_RS05020;product=UDP-galactopyranose mutase;protein_id=WP_009875044.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1057458 1058528 . - . ID=gene-D1109_RS05025;Name=D1109_RS05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05025;old_locus_tag=D1109_05045 NZ_CP031858.1 Protein Homology CDS 1057458 1058528 . - 0 ID=cds-WP_237611451.1;Parent=gene-D1109_RS05025;Dbxref=Genbank:WP_237611451.1;Name=WP_237611451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005645759.1;locus_tag=D1109_RS05025;product=glycosyltransferase;protein_id=WP_237611451.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1058528 1059535 . - . ID=gene-D1109_RS05030;Name=D1109_RS05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05030;old_locus_tag=D1109_05050 NZ_CP031858.1 Protein Homology CDS 1058528 1059535 . - 0 ID=cds-WP_237611452.1;Parent=gene-D1109_RS05030;Dbxref=Genbank:WP_237611452.1;Name=WP_237611452.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013884.2;locus_tag=D1109_RS05030;product=acyltransferase;protein_id=WP_237611452.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1059546 1060277 . - . ID=gene-D1109_RS05035;Name=D1109_RS05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05035;old_locus_tag=D1109_05055 NZ_CP031858.1 Protein Homology CDS 1059546 1060277 . - 0 ID=cds-WP_009875042.1;Parent=gene-D1109_RS05035;Dbxref=Genbank:WP_009875042.1;Name=WP_009875042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875042.1;locus_tag=D1109_RS05035;product=ABC transporter ATP-binding protein;protein_id=WP_009875042.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1060277 1061068 . - . ID=gene-D1109_RS05040;Name=D1109_RS05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05040;old_locus_tag=D1109_05060 NZ_CP031858.1 Protein Homology CDS 1060277 1061068 . - 0 ID=cds-WP_009875041.1;Parent=gene-D1109_RS05040;Dbxref=Genbank:WP_009875041.1;Name=WP_009875041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005613008.1;locus_tag=D1109_RS05040;product=ABC transporter permease;protein_id=WP_009875041.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1061269 1061610 . + . ID=gene-D1109_RS05045;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=D1109_RS05045;old_locus_tag=D1109_05065 NZ_CP031858.1 Protein Homology CDS 1061269 1061610 . + 0 ID=cds-WP_009875040.1;Parent=gene-D1109_RS05045;Dbxref=Genbank:WP_009875040.1;Name=WP_009875040.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005706127.1;locus_tag=D1109_RS05045;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_009875040.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1061689 1062597 . - . ID=gene-D1109_RS05050;Name=D1109_RS05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05050;old_locus_tag=D1109_05070 NZ_CP031858.1 Protein Homology CDS 1061689 1062597 . - 0 ID=cds-WP_237611453.1;Parent=gene-D1109_RS05050;Dbxref=Genbank:WP_237611453.1;Name=WP_237611453.1;Ontology_term=GO:0009234,GO:0046428,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=1%2C4-dihydroxy-2-naphthoate octaprenyltransferase activity|0046428||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005605341.1;locus_tag=D1109_RS05050;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WP_237611453.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1062597 1063517 . - . ID=gene-D1109_RS05055;Name=D1109_RS05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05055;old_locus_tag=D1109_05075 NZ_CP031858.1 Protein Homology CDS 1062597 1063517 . - 0 ID=cds-WP_237611454.1;Parent=gene-D1109_RS05055;Dbxref=Genbank:WP_237611454.1;Name=WP_237611454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005602098.1;locus_tag=D1109_RS05055;product=PDDEXK nuclease domain-containing protein;protein_id=WP_237611454.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1063654 1064409 . + . ID=gene-D1109_RS05060;Name=tsaA;gbkey=Gene;gene=tsaA;gene_biotype=protein_coding;locus_tag=D1109_RS05060;old_locus_tag=D1109_05080 NZ_CP031858.1 Protein Homology CDS 1063654 1064409 . + 0 ID=cds-WP_237611455.1;Parent=gene-D1109_RS05060;Dbxref=Genbank:WP_237611455.1;Name=WP_237611455.1;Ontology_term=GO:0006400,GO:0008757;gbkey=CDS;gene=tsaA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263242.1;locus_tag=D1109_RS05060;product=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;protein_id=WP_237611455.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1064451 1065167 . + . ID=gene-D1109_RS05065;Name=D1109_RS05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05065;old_locus_tag=D1109_05085 NZ_CP031858.1 Protein Homology CDS 1064451 1065167 . + 0 ID=cds-WP_005602096.1;Parent=gene-D1109_RS05065;Dbxref=Genbank:WP_005602096.1;Name=WP_005602096.1;Note=The SIMPL domain is named for its presence in mouse protein SIMPL (signalling molecule that associates with mouse pelle-like kinase). Bacterial member BP26%2C from Brucella%2C was shown to assemble into a channel-like structure%2C while YggE from E. coli has been associated with resistance to oxidative stress.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005602096.1;locus_tag=D1109_RS05065;product=SIMPL domain-containing protein;protein_id=WP_005602096.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1065313 1065999 . + . ID=gene-D1109_RS05070;Name=aqpZ;gbkey=Gene;gene=aqpZ;gene_biotype=protein_coding;locus_tag=D1109_RS05070;old_locus_tag=D1109_05090 NZ_CP031858.1 Protein Homology CDS 1065313 1065999 . + 0 ID=cds-WP_237611456.1;Parent=gene-D1109_RS05070;Dbxref=Genbank:WP_237611456.1;Name=WP_237611456.1;Ontology_term=GO:0006833,GO:0015250;gbkey=CDS;gene=aqpZ;go_function=water channel activity|0015250||IEA;go_process=water transport|0006833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005617943.1;locus_tag=D1109_RS05070;product=aquaporin Z;protein_id=WP_237611456.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1066068 1066205 . + . ID=gene-D1109_RS05075;Name=D1109_RS05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05075 NZ_CP031858.1 Protein Homology CDS 1066068 1066205 . + 0 ID=cds-WP_005605333.1;Parent=gene-D1109_RS05075;Dbxref=Genbank:WP_005605333.1;Name=WP_005605333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005605333.1;locus_tag=D1109_RS05075;product=hypothetical protein;protein_id=WP_005605333.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1066348 1066941 . + . ID=gene-D1109_RS05080;Name=slyD;gbkey=Gene;gene=slyD;gene_biotype=protein_coding;locus_tag=D1109_RS05080;old_locus_tag=D1109_05095 NZ_CP031858.1 Protein Homology CDS 1066348 1066941 . + 0 ID=cds-WP_005602095.1;Parent=gene-D1109_RS05080;Dbxref=Genbank:WP_005602095.1;Name=WP_005602095.1;Ontology_term=GO:0003755;gbkey=CDS;gene=slyD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015674369.1;locus_tag=D1109_RS05080;product=peptidylprolyl isomerase;protein_id=WP_005602095.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1067068 1068594 . + . ID=gene-D1109_RS05085;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=D1109_RS05085;old_locus_tag=D1109_05100 NZ_CP031858.1 Protein Homology CDS 1067068 1068594 . + 0 ID=cds-WP_005605329.1;Parent=gene-D1109_RS05085;Dbxref=Genbank:WP_005605329.1;Name=WP_005605329.1;Ontology_term=GO:0009097,GO:0004794;gbkey=CDS;gene=ilvA;go_function=L-threonine ammonia-lyase activity|0004794||IEA;go_process=isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875034.1;locus_tag=D1109_RS05085;product=threonine ammonia-lyase%2C biosynthetic;protein_id=WP_005605329.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1068666 1070000 . + . ID=gene-D1109_RS05090;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=D1109_RS05090;old_locus_tag=D1109_05105 NZ_CP031858.1 Protein Homology CDS 1068666 1070000 . + 0 ID=cds-WP_005598675.1;Parent=gene-D1109_RS05090;Dbxref=Genbank:WP_005598675.1;Name=WP_005598675.1;Ontology_term=GO:0005975,GO:0000287,GO:0008966,GO:0016868;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA,intramolecular transferase activity%2C phosphotransferases|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015939592.1;locus_tag=D1109_RS05090;product=phosphoglucosamine mutase;protein_id=WP_005598675.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1070147 1070806 . + . ID=gene-D1109_RS05095;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=D1109_RS05095;old_locus_tag=D1109_05110 NZ_CP031858.1 Protein Homology CDS 1070147 1070806 . + 0 ID=cds-WP_005598674.1;Parent=gene-D1109_RS05095;Dbxref=Genbank:WP_005598674.1;Name=WP_005598674.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652327.1;locus_tag=D1109_RS05095;product=ribose-5-phosphate isomerase RpiA;protein_id=WP_005598674.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1070950 1072179 . + . ID=gene-D1109_RS05100;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=D1109_RS05100;old_locus_tag=D1109_05115 NZ_CP031858.1 Protein Homology CDS 1070950 1072179 . + 0 ID=cds-WP_005598673.1;Parent=gene-D1109_RS05100;Dbxref=Genbank:WP_005598673.1;Name=WP_005598673.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=serA;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005612999.1;locus_tag=D1109_RS05100;product=phosphoglycerate dehydrogenase;protein_id=WP_005598673.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1072466 1073254 . + . ID=gene-D1109_RS05105;Name=D1109_RS05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05105;old_locus_tag=D1109_05120 NZ_CP031858.1 Protein Homology CDS 1072466 1073254 . + 0 ID=cds-WP_005599960.1-3;Parent=gene-D1109_RS05105;Dbxref=Genbank:WP_005599960.1;Name=WP_005599960.1;Ontology_term=GO:0006313;gbkey=CDS;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618583.1;locus_tag=D1109_RS05105;product=transposase;protein_id=WP_005599960.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1073353 1074330 . - . ID=gene-D1109_RS05110;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;locus_tag=D1109_RS05110;old_locus_tag=D1109_05125 NZ_CP031858.1 Protein Homology CDS 1073353 1074330 . - 0 ID=cds-WP_005598666.1;Parent=gene-D1109_RS05110;Dbxref=Genbank:WP_005598666.1;Name=WP_005598666.1;Ontology_term=GO:0006829,GO:0046872;gbkey=CDS;gene=znuA;go_function=metal ion binding|0046872||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598666.1;locus_tag=D1109_RS05110;product=zinc ABC transporter substrate-binding protein ZnuA;protein_id=WP_005598666.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1074476 1075939 . + . ID=gene-D1109_RS05115;Name=ubiD;gbkey=Gene;gene=ubiD;gene_biotype=protein_coding;locus_tag=D1109_RS05115;old_locus_tag=D1109_05130 NZ_CP031858.1 Protein Homology CDS 1074476 1075939 . + 0 ID=cds-WP_237611457.1;Parent=gene-D1109_RS05115;Dbxref=Genbank:WP_237611457.1;Name=WP_237611457.1;Ontology_term=GO:0016831;gbkey=CDS;gene=ubiD;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005617934.1;locus_tag=D1109_RS05115;product=4-hydroxy-3-polyprenylbenzoate decarboxylase;protein_id=WP_237611457.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1076089 1076610 . + . ID=gene-D1109_RS05120;Name=D1109_RS05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05120;old_locus_tag=D1109_05135 NZ_CP031858.1 Protein Homology CDS 1076089 1076610 . + 0 ID=cds-WP_005598662.1;Parent=gene-D1109_RS05120;Dbxref=Genbank:WP_005598662.1;Name=WP_005598662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005602082.1;locus_tag=D1109_RS05120;product=isoprenylcysteine carboxyl methyltransferase family protein;protein_id=WP_005598662.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1076680 1077756 . - . ID=gene-D1109_RS05125;Name=D1109_RS05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05125;old_locus_tag=D1109_05140 NZ_CP031858.1 Protein Homology CDS 1076680 1077756 . - 0 ID=cds-WP_005598659.1;Parent=gene-D1109_RS05125;Dbxref=Genbank:WP_005598659.1;Name=WP_005598659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875190.1;locus_tag=D1109_RS05125;product=RsiV family protein;protein_id=WP_005598659.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1078157 1081144 . + . ID=gene-D1109_RS05130;Name=rne;gbkey=Gene;gene=rne;gene_biotype=protein_coding;locus_tag=D1109_RS05130;old_locus_tag=D1109_05145 NZ_CP031858.1 Protein Homology CDS 1078157 1081144 . + 0 ID=cds-WP_237611458.1;Parent=gene-D1109_RS05130;Dbxref=Genbank:WP_237611458.1;Name=WP_237611458.1;Ontology_term=GO:0006396,GO:0008995;gbkey=CDS;gene=rne;go_function=ribonuclease E activity|0008995||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011848591.1;locus_tag=D1109_RS05130;product=ribonuclease E;protein_id=WP_237611458.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1081305 1081817 . + . ID=gene-D1109_RS05135;Name=D1109_RS05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05135;old_locus_tag=D1109_05150 NZ_CP031858.1 Protein Homology CDS 1081305 1081817 . + 0 ID=cds-WP_237611459.1;Parent=gene-D1109_RS05135;Dbxref=Genbank:WP_237611459.1;Name=WP_237611459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263235.1;locus_tag=D1109_RS05135;product=histone H1 family protein;protein_id=WP_237611459.1;transl_table=11 NZ_CP031858.1 RefSeq pseudogene 1081921 1083320 . + . ID=gene-D1109_RS05140;Name=D1109_RS05140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D1109_RS05140;old_locus_tag=D1109_05155;pseudo=true NZ_CP031858.1 Protein Homology CDS 1081921 1083320 . + 0 ID=cds-D1109_RS05140;Parent=gene-D1109_RS05140;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612109.1;locus_tag=D1109_RS05140;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP031858.1 RefSeq gene 1083456 1084031 . - . ID=gene-D1109_RS05145;Name=D1109_RS05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05145;old_locus_tag=D1109_05160 NZ_CP031858.1 Protein Homology CDS 1083456 1084031 . - 0 ID=cds-WP_005598646.1;Parent=gene-D1109_RS05145;Dbxref=Genbank:WP_005598646.1;Name=WP_005598646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005602072.1;locus_tag=D1109_RS05145;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_005598646.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1084230 1084760 . + . ID=gene-D1109_RS05150;Name=napF;gbkey=Gene;gene=napF;gene_biotype=protein_coding;locus_tag=D1109_RS05150;old_locus_tag=D1109_05165 NZ_CP031858.1 Protein Homology CDS 1084230 1084760 . + 0 ID=cds-WP_005602070.1;Parent=gene-D1109_RS05150;Dbxref=Genbank:WP_005602070.1;Name=WP_005602070.1;Ontology_term=GO:0051539;gbkey=CDS;gene=napF;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005602070.1;locus_tag=D1109_RS05150;product=ferredoxin-type protein NapF;protein_id=WP_005602070.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1084763 1085032 . + . ID=gene-D1109_RS05155;Name=D1109_RS05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05155;old_locus_tag=D1109_05170 NZ_CP031858.1 Protein Homology CDS 1084763 1085032 . + 0 ID=cds-WP_005598644.1;Parent=gene-D1109_RS05155;Dbxref=Genbank:WP_005598644.1;Name=WP_005598644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598644.1;locus_tag=D1109_RS05155;product=chaperone NapD;protein_id=WP_005598644.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1085064 1087547 . + . ID=gene-D1109_RS05160;Name=napA;gbkey=Gene;gene=napA;gene_biotype=protein_coding;locus_tag=D1109_RS05160;old_locus_tag=D1109_05175 NZ_CP031858.1 Protein Homology CDS 1085064 1087547 . + 0 ID=cds-WP_005619821.1;Parent=gene-D1109_RS05160;Dbxref=Genbank:WP_005619821.1;Name=WP_005619821.1;Ontology_term=GO:0008940,GO:0030151,GO:0043546,GO:0051539;gbkey=CDS;gene=napA;go_function=nitrate reductase activity|0008940||IEA,molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005724436.1;locus_tag=D1109_RS05160;product=nitrate reductase catalytic subunit NapA;protein_id=WP_005619821.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1087682 1088587 . + . ID=gene-D1109_RS05165;Name=napG;gbkey=Gene;gene=napG;gene_biotype=protein_coding;locus_tag=D1109_RS05165;old_locus_tag=D1109_05180 NZ_CP031858.1 Protein Homology CDS 1087682 1088587 . + 0 ID=cds-WP_005598642.1;Parent=gene-D1109_RS05165;Dbxref=Genbank:WP_005598642.1;Name=WP_005598642.1;gbkey=CDS;gene=napG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652473.1;locus_tag=D1109_RS05165;product=ferredoxin-type protein NapG;protein_id=WP_005598642.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1088587 1089480 . + . ID=gene-D1109_RS05170;Name=napH;gbkey=Gene;gene=napH;gene_biotype=protein_coding;locus_tag=D1109_RS05170;old_locus_tag=D1109_05185 NZ_CP031858.1 Protein Homology CDS 1088587 1089480 . + 0 ID=cds-WP_005598641.1;Parent=gene-D1109_RS05170;Dbxref=Genbank:WP_005598641.1;Name=WP_005598641.1;gbkey=CDS;gene=napH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263230.1;locus_tag=D1109_RS05170;product=quinol dehydrogenase ferredoxin subunit NapH;protein_id=WP_005598641.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1089499 1089921 . + . ID=gene-D1109_RS05175;Name=D1109_RS05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05175;old_locus_tag=D1109_05190 NZ_CP031858.1 Protein Homology CDS 1089499 1089921 . + 0 ID=cds-WP_005598639.1;Parent=gene-D1109_RS05175;Dbxref=Genbank:WP_005598639.1;Name=WP_005598639.1;Ontology_term=GO:0009061;gbkey=CDS;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598639.1;locus_tag=D1109_RS05175;product=nitrate reductase cytochrome c-type subunit;protein_id=WP_005598639.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1089933 1090547 . + . ID=gene-D1109_RS05180;Name=D1109_RS05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05180;old_locus_tag=D1109_05195 NZ_CP031858.1 Protein Homology CDS 1089933 1090547 . + 0 ID=cds-WP_005605279.1;Parent=gene-D1109_RS05180;Dbxref=Genbank:WP_005605279.1;Name=WP_005605279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005605279.1;locus_tag=D1109_RS05180;product=cytochrome c3 family protein;protein_id=WP_005605279.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1090832 1092460 . - . ID=gene-D1109_RS05185;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=D1109_RS05185;old_locus_tag=D1109_05200 NZ_CP031858.1 Protein Homology CDS 1090832 1092460 . - 0 ID=cds-WP_043995349.1;Parent=gene-D1109_RS05185;Dbxref=Genbank:WP_043995349.1;Name=WP_043995349.1;Ontology_term=GO:0032977,GO:0016021;gbkey=CDS;gene=yidC;go_component=integral component of membrane|0016021||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263229.1;locus_tag=D1109_RS05185;product=membrane protein insertase YidC;protein_id=WP_043995349.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1092612 1093037 . - . ID=gene-D1109_RS05190;Name=D1109_RS05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05190;old_locus_tag=D1109_05205 NZ_CP031858.1 Protein Homology CDS 1092612 1093037 . - 0 ID=cds-WP_005598632.1;Parent=gene-D1109_RS05190;Dbxref=Genbank:WP_005598632.1;Name=WP_005598632.1;Ontology_term=GO:0016790;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598632.1;locus_tag=D1109_RS05190;product=hotdog fold thioesterase;protein_id=WP_005598632.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1093170 1096259 . - . ID=gene-D1109_RS05195;Name=D1109_RS05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05195;old_locus_tag=D1109_05210 NZ_CP031858.1 Protein Homology CDS 1093170 1096259 . - 0 ID=cds-WP_005615817.1;Parent=gene-D1109_RS05195;Dbxref=Genbank:WP_005615817.1;Name=WP_005615817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263228.1;locus_tag=D1109_RS05195;product=FAD-binding oxidoreductase;protein_id=WP_005615817.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1096687 1097793 . + . ID=gene-D1109_RS05200;Name=ompA;gbkey=Gene;gene=ompA;gene_biotype=protein_coding;locus_tag=D1109_RS05200;old_locus_tag=D1109_05215 NZ_CP031858.1 Protein Homology CDS 1096687 1097793 . + 0 ID=cds-WP_005602060.1;Parent=gene-D1109_RS05200;Dbxref=Genbank:WP_005602060.1;Name=WP_005602060.1;gbkey=CDS;gene=ompA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_119863613.1;locus_tag=D1109_RS05200;product=porin OmpA;protein_id=WP_005602060.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1098047 1099039 . + . ID=gene-D1109_RS05205;Name=mglB;gbkey=Gene;gene=mglB;gene_biotype=protein_coding;locus_tag=D1109_RS05205;old_locus_tag=D1109_05220 NZ_CP031858.1 Protein Homology CDS 1098047 1099039 . + 0 ID=cds-WP_005598626.1;Parent=gene-D1109_RS05205;Dbxref=Genbank:WP_005598626.1;Name=WP_005598626.1;Ontology_term=GO:0030246;gbkey=CDS;gene=mglB;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015701875.1;locus_tag=D1109_RS05205;product=galactose/glucose ABC transporter substrate-binding protein MglB;protein_id=WP_005598626.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1099102 1100601 . + . ID=gene-D1109_RS05210;Name=mglA;gbkey=Gene;gene=mglA;gene_biotype=protein_coding;locus_tag=D1109_RS05210;old_locus_tag=D1109_05225 NZ_CP031858.1 Protein Homology CDS 1099102 1100601 . + 0 ID=cds-WP_005619824.1;Parent=gene-D1109_RS05210;Dbxref=Genbank:WP_005619824.1;Name=WP_005619824.1;Ontology_term=GO:0008643,GO:0005524,GO:0043211,GO:0016020;gbkey=CDS;gene=mglA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type carbohydrate transporter activity|0043211||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005709009.1;locus_tag=D1109_RS05210;product=galactose/methyl galactoside ABC transporter ATP-binding protein MglA;protein_id=WP_005619824.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1100618 1101628 . + . ID=gene-D1109_RS05215;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=D1109_RS05215;old_locus_tag=D1109_05230 NZ_CP031858.1 Protein Homology CDS 1100618 1101628 . + 0 ID=cds-WP_005598621.1;Parent=gene-D1109_RS05215;Dbxref=Genbank:WP_005598621.1;Name=WP_005598621.1;Ontology_term=GO:0008643,GO:0055085,GO:0022857,GO:0016021;gbkey=CDS;gene=mglC;go_component=integral component of membrane|0016021||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018355241.1;locus_tag=D1109_RS05215;product=galactose/methyl galactoside ABC transporter permease MglC;protein_id=WP_005598621.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1101699 1102124 . - . ID=gene-D1109_RS05220;Name=D1109_RS05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05220;old_locus_tag=D1109_05235 NZ_CP031858.1 Protein Homology CDS 1101699 1102124 . - 0 ID=cds-WP_005598619.1;Parent=gene-D1109_RS05220;Dbxref=Genbank:WP_005598619.1;Name=WP_005598619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005612952.1;locus_tag=D1109_RS05220;product=PACE efflux transporter;protein_id=WP_005598619.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1102166 1102507 . - . ID=gene-D1109_RS05225;Name=D1109_RS05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05225;old_locus_tag=D1109_05240 NZ_CP031858.1 Protein Homology CDS 1102166 1102507 . - 0 ID=cds-WP_237611460.1;Parent=gene-D1109_RS05225;Dbxref=Genbank:WP_237611460.1;Name=WP_237611460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005605271.1;locus_tag=D1109_RS05225;product=hypothetical protein;protein_id=WP_237611460.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1102727 1103140 . + . ID=gene-D1109_RS05230;Name=D1109_RS05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05230;old_locus_tag=D1109_05245 NZ_CP031858.1 Protein Homology CDS 1102727 1103140 . + 0 ID=cds-WP_009875516.1;Parent=gene-D1109_RS05230;Dbxref=Genbank:WP_009875516.1;Name=WP_009875516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875516.1;locus_tag=D1109_RS05230;product=hypothetical protein;protein_id=WP_009875516.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1103248 1104723 . + . ID=gene-D1109_RS05235;Name=mqo;gbkey=Gene;gene=mqo;gene_biotype=protein_coding;locus_tag=D1109_RS05235;old_locus_tag=D1109_05250 NZ_CP031858.1 Protein Homology CDS 1103248 1104723 . + 0 ID=cds-WP_237611461.1;Parent=gene-D1109_RS05235;Dbxref=Genbank:WP_237611461.1;Name=WP_237611461.1;Ontology_term=GO:0006099,GO:0008924;gbkey=CDS;gene=mqo;go_function=malate dehydrogenase (quinone) activity|0008924||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005610572.1;locus_tag=D1109_RS05235;product=malate dehydrogenase (quinone);protein_id=WP_237611461.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1104904 1106679 . + . ID=gene-D1109_RS05240;Name=D1109_RS05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05240;old_locus_tag=D1109_05255 NZ_CP031858.1 Protein Homology CDS 1104904 1106679 . + 0 ID=cds-WP_237611462.1;Parent=gene-D1109_RS05240;Dbxref=Genbank:WP_237611462.1;Name=WP_237611462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598611.1;locus_tag=D1109_RS05240;product=long-chain fatty acid--CoA ligase;protein_id=WP_237611462.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1106742 1107644 . - . ID=gene-D1109_RS05245;Name=D1109_RS05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05245;old_locus_tag=D1109_05260 NZ_CP031858.1 Protein Homology CDS 1106742 1107644 . - 0 ID=cds-WP_005620526.1;Parent=gene-D1109_RS05245;Dbxref=Genbank:WP_005620526.1;Name=WP_005620526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012478542.1;locus_tag=D1109_RS05245;product=aldo/keto reductase;protein_id=WP_005620526.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1107784 1108077 . + . ID=gene-D1109_RS05250;Name=D1109_RS05250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05250;old_locus_tag=D1109_05265 NZ_CP031858.1 Protein Homology CDS 1107784 1108077 . + 0 ID=cds-WP_005598606.1;Parent=gene-D1109_RS05250;Dbxref=Genbank:WP_005598606.1;Name=WP_005598606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598606.1;locus_tag=D1109_RS05250;product=YfcZ/YiiS family protein;protein_id=WP_005598606.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1108141 1109343 . - . ID=gene-D1109_RS05255;Name=D1109_RS05255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05255;old_locus_tag=D1109_05270 NZ_CP031858.1 Protein Homology CDS 1108141 1109343 . - 0 ID=cds-WP_005612942.1;Parent=gene-D1109_RS05255;Dbxref=Genbank:WP_005612942.1;Name=WP_005612942.1;Ontology_term=GO:0015801,GO:0015173,GO:0005887;gbkey=CDS;go_component=integral component of plasma membrane|0005887||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005612942.1;locus_tag=D1109_RS05255;product=aromatic amino acid transporter;protein_id=WP_005612942.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1109543 1110163 . + . ID=gene-D1109_RS05260;Name=D1109_RS05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05260;old_locus_tag=D1109_05275 NZ_CP031858.1 Protein Homology CDS 1109543 1110163 . + 0 ID=cds-WP_005619829.1;Parent=gene-D1109_RS05260;Dbxref=Genbank:WP_005619829.1;Name=WP_005619829.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011848583.1;locus_tag=D1109_RS05260;product=MerR family transcriptional regulator;protein_id=WP_005619829.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1110255 1112528 . - . ID=gene-D1109_RS05265;Name=gshAB;gbkey=Gene;gene=gshAB;gene_biotype=protein_coding;locus_tag=D1109_RS05265;old_locus_tag=D1109_05280 NZ_CP031858.1 Protein Homology CDS 1110255 1112528 . - 0 ID=cds-WP_237611463.1;Parent=gene-D1109_RS05265;Dbxref=Genbank:WP_237611463.1;Name=WP_237611463.1;Ontology_term=GO:0006750,GO:0004357,GO:0005524,GO:0046872;gbkey=CDS;gene=gshAB;go_function=glutamate-cysteine ligase activity|0004357||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263222.1;locus_tag=D1109_RS05265;product=bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB;protein_id=WP_237611463.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1112684 1113577 . - . ID=gene-D1109_RS05270;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=D1109_RS05270;old_locus_tag=D1109_05285 NZ_CP031858.1 Protein Homology CDS 1112684 1113577 . - 0 ID=cds-WP_005612934.1;Parent=gene-D1109_RS05270;Dbxref=Genbank:WP_005612934.1;Name=WP_005612934.1;Note=Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=asd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005612934.1;locus_tag=D1109_RS05270;product=archaetidylserine decarboxylase;protein_id=WP_005612934.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1113728 1114072 . - . ID=gene-D1109_RS05275;Name=D1109_RS05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05275;old_locus_tag=D1109_05290 NZ_CP031858.1 Protein Homology CDS 1113728 1114072 . - 0 ID=cds-WP_005599904.1;Parent=gene-D1109_RS05275;Dbxref=Genbank:WP_005599904.1;Name=WP_005599904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005605243.1;locus_tag=D1109_RS05275;product=ComEA family DNA-binding protein;protein_id=WP_005599904.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1114373 1115764 . + . ID=gene-D1109_RS05280;Name=D1109_RS05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05280;old_locus_tag=D1109_05295 NZ_CP031858.1 Protein Homology CDS 1114373 1115764 . + 0 ID=cds-WP_237611464.1;Parent=gene-D1109_RS05280;Dbxref=Genbank:WP_237611464.1;Name=WP_237611464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005617881.1;locus_tag=D1109_RS05280;product=GlcNAc transferase;protein_id=WP_237611464.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1115886 1116290 . + . ID=gene-D1109_RS05285;Name=D1109_RS05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05285;old_locus_tag=D1109_05300 NZ_CP031858.1 Protein Homology CDS 1115886 1116290 . + 0 ID=cds-WP_005599908.1;Parent=gene-D1109_RS05285;Dbxref=Genbank:WP_005599908.1;Name=WP_005599908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005602029.1;locus_tag=D1109_RS05285;product=MliC family protein;protein_id=WP_005599908.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1116372 1117409 . + . ID=gene-D1109_RS05290;Name=waaF;gbkey=Gene;gene=waaF;gene_biotype=protein_coding;locus_tag=D1109_RS05290;old_locus_tag=D1109_05305 NZ_CP031858.1 Protein Homology CDS 1116372 1117409 . + 0 ID=cds-WP_005619838.1;Parent=gene-D1109_RS05290;Dbxref=Genbank:WP_005619838.1;Name=WP_005619838.1;Ontology_term=GO:0009244,GO:0008920;gbkey=CDS;gene=waaF;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263213.1;locus_tag=D1109_RS05290;product=lipopolysaccharide heptosyltransferase II;protein_id=WP_005619838.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1117484 1118443 . + . ID=gene-D1109_RS05295;Name=rfaC;gbkey=Gene;gene=rfaC;gene_biotype=protein_coding;locus_tag=D1109_RS05295;old_locus_tag=D1109_05310 NZ_CP031858.1 Protein Homology CDS 1117484 1118443 . + 0 ID=cds-WP_005602025.1;Parent=gene-D1109_RS05295;Dbxref=Genbank:WP_005602025.1;Name=WP_005602025.1;Ontology_term=GO:0009244,GO:0008920;gbkey=CDS;gene=rfaC;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263212.1;locus_tag=D1109_RS05295;product=lipopolysaccharide heptosyltransferase RfaC;protein_id=WP_005602025.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1118565 1118939 . + . ID=gene-D1109_RS05300;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=D1109_RS05300;old_locus_tag=D1109_05315 NZ_CP031858.1 Protein Homology CDS 1118565 1118939 . + 0 ID=cds-WP_005543325.1;Parent=gene-D1109_RS05300;Dbxref=Genbank:WP_005543325.1;Name=WP_005543325.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsL;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005306278.1;locus_tag=D1109_RS05300;product=30S ribosomal protein S12;protein_id=WP_005543325.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1119076 1119546 . + . ID=gene-D1109_RS05305;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=D1109_RS05305;old_locus_tag=D1109_05320 NZ_CP031858.1 Protein Homology CDS 1119076 1119546 . + 0 ID=cds-WP_005619841.1;Parent=gene-D1109_RS05305;Dbxref=Genbank:WP_005619841.1;Name=WP_005619841.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsG;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742319.1;locus_tag=D1109_RS05305;product=30S ribosomal protein S7;protein_id=WP_005619841.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1119646 1121751 . + . ID=gene-D1109_RS05310;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=D1109_RS05310;old_locus_tag=D1109_05325 NZ_CP031858.1 Protein Homology CDS 1119646 1121751 . + 0 ID=cds-WP_005620535.1;Parent=gene-D1109_RS05310;Dbxref=Genbank:WP_005620535.1;Name=WP_005620535.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652490.1;locus_tag=D1109_RS05310;product=elongation factor G;protein_id=WP_005620535.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1121813 1122997 . + . ID=gene-D1109_RS05315;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=D1109_RS05315;old_locus_tag=D1109_05330 NZ_CP031858.1 Protein Homology CDS 1121813 1122997 . + 0 ID=cds-WP_009875214.1;Parent=gene-D1109_RS05315;Dbxref=Genbank:WP_009875214.1;Name=WP_009875214.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011199348.1;locus_tag=D1109_RS05315;product=elongation factor Tu;protein_id=WP_009875214.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1123288 1123617 . + . ID=gene-D1109_RS05320;Name=D1109_RS05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05320 NZ_CP031858.1 GeneMarkS-2+ CDS 1123288 1123617 . + 0 ID=cds-WP_237611465.1;Parent=gene-D1109_RS05320;Dbxref=Genbank:WP_237611465.1;Name=WP_237611465.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=D1109_RS05320;product=hypothetical protein;protein_id=WP_237611465.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1123674 1124075 . + . ID=gene-D1109_RS05325;Name=D1109_RS05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05325;old_locus_tag=D1109_05335 NZ_CP031858.1 GeneMarkS-2+ CDS 1123674 1124075 . + 0 ID=cds-WP_237611466.1;Parent=gene-D1109_RS05325;Dbxref=Genbank:WP_237611466.1;Name=WP_237611466.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=D1109_RS05325;product=transposase;protein_id=WP_237611466.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1124231 1125235 . - . ID=gene-D1109_RS05330;Name=fbp;gbkey=Gene;gene=fbp;gene_biotype=protein_coding;locus_tag=D1109_RS05330;old_locus_tag=D1109_05340 NZ_CP031858.1 Protein Homology CDS 1124231 1125235 . - 0 ID=cds-WP_005598591.1;Parent=gene-D1109_RS05330;Dbxref=Genbank:WP_005598591.1;Name=WP_005598591.1;Ontology_term=GO:0005975,GO:0042132;gbkey=CDS;gene=fbp;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005605321.1;locus_tag=D1109_RS05330;product=class 1 fructose-bisphosphatase;protein_id=WP_005598591.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1125358 1126722 . + . ID=gene-D1109_RS05335;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=D1109_RS05335;old_locus_tag=D1109_05345 NZ_CP031858.1 Protein Homology CDS 1125358 1126722 . + 0 ID=cds-WP_011848596.1;Parent=gene-D1109_RS05335;Dbxref=Genbank:WP_011848596.1;Name=WP_011848596.1;Ontology_term=GO:0009252,GO:0016881;gbkey=CDS;gene=mpl;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618979.1;locus_tag=D1109_RS05335;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WP_011848596.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1126813 1127859 . - . ID=gene-D1109_RS05340;Name=fbpC;gbkey=Gene;gene=fbpC;gene_biotype=protein_coding;locus_tag=D1109_RS05340;old_locus_tag=D1109_05350 NZ_CP031858.1 Protein Homology CDS 1126813 1127859 . - 0 ID=cds-WP_005608616.1;Parent=gene-D1109_RS05340;Dbxref=Genbank:WP_005608616.1;Name=WP_005608616.1;Ontology_term=GO:0055085,GO:0005524,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=fbpC;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598589.1;locus_tag=D1109_RS05340;product=ferric ABC transporter ATP-binding protein;protein_id=WP_005608616.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1127906 1129969 . - . ID=gene-D1109_RS05345;Name=D1109_RS05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05345;old_locus_tag=D1109_05355 NZ_CP031858.1 Protein Homology CDS 1127906 1129969 . - 0 ID=cds-WP_237611467.1;Parent=gene-D1109_RS05345;Dbxref=Genbank:WP_237611467.1;Name=WP_237611467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005605314.1;locus_tag=D1109_RS05345;product=iron ABC transporter permease;protein_id=WP_237611467.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1130075 1131115 . - . ID=gene-D1109_RS05350;Name=D1109_RS05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05350;old_locus_tag=D1109_05360 NZ_CP031858.1 Protein Homology CDS 1130075 1131115 . - 0 ID=cds-WP_237611468.1;Parent=gene-D1109_RS05350;Dbxref=Genbank:WP_237611468.1;Name=WP_237611468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005605312.1;locus_tag=D1109_RS05350;product=ABC transporter substrate-binding protein;protein_id=WP_237611468.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1131406 1131924 . + . ID=gene-D1109_RS05355;Name=apxIC;gbkey=Gene;gene=apxIC;gene_biotype=protein_coding;locus_tag=D1109_RS05355;old_locus_tag=D1109_05365 NZ_CP031858.1 Protein Homology CDS 1131406 1131924 . + 0 ID=cds-WP_009875272.1;Parent=gene-D1109_RS05355;Dbxref=Genbank:WP_009875272.1;Name=WP_009875272.1;gbkey=CDS;gene=apxIC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875272.1;locus_tag=D1109_RS05355;product=RTX toxin-activating lysine-acyltransferase ApxIC;protein_id=WP_009875272.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1131934 1135002 . + . ID=gene-D1109_RS05360;Name=apxIA;gbkey=Gene;gene=apxIA;gene_biotype=protein_coding;locus_tag=D1109_RS05360;old_locus_tag=D1109_05370 NZ_CP031858.1 Protein Homology CDS 1131934 1135002 . + 0 ID=cds-WP_005612908.1;Parent=gene-D1109_RS05360;Dbxref=Genbank:WP_005612908.1;Name=WP_005612908.1;gbkey=CDS;gene=apxIA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_140441270.1;locus_tag=D1109_RS05360;product=RTX family hemolysin ApxIA;protein_id=WP_005612908.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1135083 1137206 . + . ID=gene-D1109_RS05365;Name=apxIB;gbkey=Gene;gene=apxIB;gene_biotype=protein_coding;locus_tag=D1109_RS05365;old_locus_tag=D1109_05375 NZ_CP031858.1 Protein Homology CDS 1135083 1137206 . + 0 ID=cds-WP_011848595.1;Parent=gene-D1109_RS05365;Dbxref=Genbank:WP_011848595.1;Name=WP_011848595.1;gbkey=CDS;gene=apxIB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_140441271.1;locus_tag=D1109_RS05365;product=RTX toxin T1SS ABC transporter permease/ATPase subunit ApxIB;protein_id=WP_011848595.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1137215 1138651 . + . ID=gene-D1109_RS05370;Name=apxID;gbkey=Gene;gene=apxID;gene_biotype=protein_coding;locus_tag=D1109_RS05370;old_locus_tag=D1109_05380 NZ_CP031858.1 Protein Homology CDS 1137215 1138651 . + 0 ID=cds-WP_005618983.1;Parent=gene-D1109_RS05370;Dbxref=Genbank:WP_005618983.1;Name=WP_005618983.1;gbkey=CDS;gene=apxID;inference=COORDINATES: similar to AA sequence:RefSeq:WP_140441352.1;locus_tag=D1109_RS05370;product=RTX toxin T1SS ABC transporter adaptor subunit ApxID;protein_id=WP_005618983.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1138905 1139234 . + . ID=gene-D1109_RS05375;Name=D1109_RS05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05375 NZ_CP031858.1 GeneMarkS-2+ CDS 1138905 1139234 . + 0 ID=cds-WP_237611465.1-2;Parent=gene-D1109_RS05375;Dbxref=Genbank:WP_237611465.1;Name=WP_237611465.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=D1109_RS05375;product=hypothetical protein;protein_id=WP_237611465.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1139291 1139692 . + . ID=gene-D1109_RS05380;Name=D1109_RS05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05380;old_locus_tag=D1109_05385 NZ_CP031858.1 GeneMarkS-2+ CDS 1139291 1139692 . + 0 ID=cds-WP_237611469.1;Parent=gene-D1109_RS05380;Dbxref=Genbank:WP_237611469.1;Name=WP_237611469.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=D1109_RS05380;product=transposase;protein_id=WP_237611469.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1139926 1140558 . - . ID=gene-D1109_RS05385;Name=D1109_RS05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05385;old_locus_tag=D1109_05395 NZ_CP031858.1 Protein Homology CDS 1139926 1140558 . - 0 ID=cds-WP_011848660.1-2;Parent=gene-D1109_RS05385;Dbxref=Genbank:WP_011848660.1;Name=WP_011848660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618679.1;locus_tag=D1109_RS05385;product=hypothetical protein;protein_id=WP_011848660.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1140962 1141822 . - . ID=gene-D1109_RS05390;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=protein_coding;locus_tag=D1109_RS05390;old_locus_tag=D1109_05400 NZ_CP031858.1 Protein Homology CDS 1140962 1141822 . - 0 ID=cds-WP_237611470.1;Parent=gene-D1109_RS05390;Dbxref=Genbank:WP_237611470.1;Name=WP_237611470.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxY;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011848604.1;locus_tag=D1109_RS05390;product=pyridoxal kinase PdxY;protein_id=WP_237611470.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1141923 1141998 . + . ID=gene-D1109_RS05395;Name=D1109_RS05395;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS05395;old_locus_tag=D1109_05405 NZ_CP031858.1 tRNAscan-SE tRNA 1141923 1141998 . + . ID=rna-D1109_RS05395;Parent=gene-D1109_RS05395;anticodon=(pos:1141956..1141958);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS05395;product=tRNA-Thr NZ_CP031858.1 tRNAscan-SE exon 1141923 1141998 . + . ID=exon-D1109_RS05395-1;Parent=rna-D1109_RS05395;anticodon=(pos:1141956..1141958);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS05395;product=tRNA-Thr NZ_CP031858.1 RefSeq gene 1142126 1143079 . - . ID=gene-D1109_RS05400;Name=accA;gbkey=Gene;gene=accA;gene_biotype=protein_coding;locus_tag=D1109_RS05400;old_locus_tag=D1109_05410 NZ_CP031858.1 Protein Homology CDS 1142126 1143079 . - 0 ID=cds-WP_005598724.1;Parent=gene-D1109_RS05400;Dbxref=Genbank:WP_005598724.1;Name=WP_005598724.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accA;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598724.1;locus_tag=D1109_RS05400;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=WP_005598724.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1143196 1144608 . - . ID=gene-D1109_RS05405;Name=D1109_RS05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05405;old_locus_tag=D1109_05415 NZ_CP031858.1 Protein Homology CDS 1143196 1144608 . - 0 ID=cds-WP_005598726.1;Parent=gene-D1109_RS05405;Dbxref=Genbank:WP_005598726.1;Name=WP_005598726.1;Ontology_term=GO:0005507;gbkey=CDS;go_function=copper ion binding|0005507||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_043947964.1;locus_tag=D1109_RS05405;product=multicopper oxidase domain-containing protein;protein_id=WP_005598726.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1144611 1145357 . - . ID=gene-D1109_RS05410;Name=D1109_RS05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05410;old_locus_tag=D1109_05420 NZ_CP031858.1 Protein Homology CDS 1144611 1145357 . - 0 ID=cds-WP_005608765.1;Parent=gene-D1109_RS05410;Dbxref=Genbank:WP_005608765.1;Name=WP_005608765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005608765.1;locus_tag=D1109_RS05410;product=1-acylglycerol-3-phosphate O-acyltransferase;protein_id=WP_005608765.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1145500 1146000 . + . ID=gene-D1109_RS05415;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=D1109_RS05415;old_locus_tag=D1109_05425 NZ_CP031858.1 Protein Homology CDS 1145500 1146000 . + 0 ID=cds-WP_005598730.1;Parent=gene-D1109_RS05415;Dbxref=Genbank:WP_005598730.1;Name=WP_005598730.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005578656.1;locus_tag=D1109_RS05415;product=thiol peroxidase;protein_id=WP_005598730.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1146122 1147480 . + . ID=gene-D1109_RS05420;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=D1109_RS05420;old_locus_tag=D1109_05430 NZ_CP031858.1 Protein Homology CDS 1146122 1147480 . + 0 ID=cds-WP_005602146.1;Parent=gene-D1109_RS05420;Dbxref=Genbank:WP_005602146.1;Name=WP_005602146.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007523948.1;locus_tag=D1109_RS05420;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_005602146.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1147588 1148943 . - . ID=gene-D1109_RS05425;Name=D1109_RS05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05425;old_locus_tag=D1109_05435 NZ_CP031858.1 Protein Homology CDS 1147588 1148943 . - 0 ID=cds-WP_237611471.1;Parent=gene-D1109_RS05425;Dbxref=Genbank:WP_237611471.1;Name=WP_237611471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013448621.1;locus_tag=D1109_RS05425;product=PFL family protein;protein_id=WP_237611471.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1148956 1149228 . - . ID=gene-D1109_RS05430;Name=D1109_RS05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05430;old_locus_tag=D1109_05440 NZ_CP031858.1 Protein Homology CDS 1148956 1149228 . - 0 ID=cds-WP_005602150.1;Parent=gene-D1109_RS05430;Dbxref=Genbank:WP_005602150.1;Name=WP_005602150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015674133.1;locus_tag=D1109_RS05430;product=ACT domain-containing protein;protein_id=WP_005602150.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1149366 1150055 . - . ID=gene-D1109_RS05435;Name=D1109_RS05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05435;old_locus_tag=D1109_05445 NZ_CP031858.1 Protein Homology CDS 1149366 1150055 . - 0 ID=cds-WP_005598738.1;Parent=gene-D1109_RS05435;Dbxref=Genbank:WP_005598738.1;Name=WP_005598738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015674134.1;locus_tag=D1109_RS05435;product=pirin family protein;protein_id=WP_005598738.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1150371 1150940 . + . ID=gene-D1109_RS05440;Name=D1109_RS05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05440;old_locus_tag=D1109_05450 NZ_CP031858.1 Protein Homology CDS 1150371 1150940 . + 0 ID=cds-WP_005598741.1;Parent=gene-D1109_RS05440;Dbxref=Genbank:WP_005598741.1;Name=WP_005598741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598741.1;locus_tag=D1109_RS05440;product=DNA starvation/stationary phase protection protein;protein_id=WP_005598741.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1151172 1151474 . + . ID=gene-D1109_RS05445;Name=D1109_RS05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05445;old_locus_tag=D1109_05455 NZ_CP031858.1 Protein Homology CDS 1151172 1151474 . + 0 ID=cds-WP_005598743.1;Parent=gene-D1109_RS05445;Dbxref=Genbank:WP_005598743.1;Name=WP_005598743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263260.1;locus_tag=D1109_RS05445;product=XRE family transcriptional regulator;protein_id=WP_005598743.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1151621 1152985 . + . ID=gene-D1109_RS05450;Name=D1109_RS05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05450;old_locus_tag=D1109_05460 NZ_CP031858.1 Protein Homology CDS 1151621 1152985 . + 0 ID=cds-WP_039709297.1;Parent=gene-D1109_RS05450;Dbxref=Genbank:WP_039709297.1;Name=WP_039709297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005602152.1;locus_tag=D1109_RS05450;product=patatin-like phospholipase family protein;protein_id=WP_039709297.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1153053 1155227 . - . ID=gene-D1109_RS05455;Name=yccS;gbkey=Gene;gene=yccS;gene_biotype=protein_coding;locus_tag=D1109_RS05455;old_locus_tag=D1109_05465 NZ_CP031858.1 Protein Homology CDS 1153053 1155227 . - 0 ID=cds-WP_237611472.1;Parent=gene-D1109_RS05455;Dbxref=Genbank:WP_237611472.1;Name=WP_237611472.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yccS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598747.1;locus_tag=D1109_RS05455;product=YccS family putative transporter;protein_id=WP_237611472.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1155309 1155767 . - . ID=gene-D1109_RS05460;Name=mgsA;gbkey=Gene;gene=mgsA;gene_biotype=protein_coding;locus_tag=D1109_RS05460;old_locus_tag=D1109_05470 NZ_CP031858.1 Protein Homology CDS 1155309 1155767 . - 0 ID=cds-WP_237611473.1;Parent=gene-D1109_RS05460;Dbxref=Genbank:WP_237611473.1;Name=WP_237611473.1;Ontology_term=GO:0006007,GO:0019242,GO:0008929;gbkey=CDS;gene=mgsA;go_function=methylglyoxal synthase activity|0008929||IEA;go_process=glucose catabolic process|0006007||IEA,methylglyoxal biosynthetic process|0019242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005608775.1;locus_tag=D1109_RS05460;product=methylglyoxal synthase;protein_id=WP_237611473.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1155900 1157180 . + . ID=gene-D1109_RS05465;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=D1109_RS05465;old_locus_tag=D1109_05475 NZ_CP031858.1 Protein Homology CDS 1155900 1157180 . + 0 ID=cds-WP_237611474.1;Parent=gene-D1109_RS05465;Dbxref=Genbank:WP_237611474.1;Name=WP_237611474.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875205.1;locus_tag=D1109_RS05465;product=threonine synthase;protein_id=WP_237611474.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1157266 1158599 . + . ID=gene-D1109_RS05470;Name=D1109_RS05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05470;old_locus_tag=D1109_05480 NZ_CP031858.1 Protein Homology CDS 1157266 1157719 . + 0 ID=cds-WP_237611475.1;Parent=gene-D1109_RS05470;Dbxref=Genbank:WP_237611475.1;Name=WP_237611475.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612109.1;locus_tag=D1109_RS05470;product=IS3 family transposase;protein_id=WP_237611475.1;transl_table=11 NZ_CP031858.1 Protein Homology CDS 1157719 1158599 . + 2 ID=cds-WP_237611475.1;Parent=gene-D1109_RS05470;Dbxref=Genbank:WP_237611475.1;Name=WP_237611475.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612109.1;locus_tag=D1109_RS05470;product=IS3 family transposase;protein_id=WP_237611475.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1158658 1161522 . - . ID=gene-D1109_RS05475;Name=D1109_RS05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05475;old_locus_tag=D1109_05485 NZ_CP031858.1 Protein Homology CDS 1158658 1161522 . - 0 ID=cds-WP_237611476.1;Parent=gene-D1109_RS05475;Dbxref=Genbank:WP_237611476.1;Name=WP_237611476.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012771641.1;locus_tag=D1109_RS05475;product=valine--tRNA ligase;protein_id=WP_237611476.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1161537 1162013 . - . ID=gene-D1109_RS05480;Name=D1109_RS05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05480;old_locus_tag=D1109_05490 NZ_CP031858.1 Protein Homology CDS 1161537 1162013 . - 0 ID=cds-WP_005619261.1;Parent=gene-D1109_RS05480;Dbxref=Genbank:WP_005619261.1;Name=WP_005619261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652336.1;locus_tag=D1109_RS05480;product=hypothetical protein;protein_id=WP_005619261.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1162265 1162441 . - . ID=gene-D1109_RS05485;Name=D1109_RS05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05485 NZ_CP031858.1 Protein Homology CDS 1162265 1162441 . - 0 ID=cds-WP_005602164.1;Parent=gene-D1109_RS05485;Dbxref=Genbank:WP_005602164.1;Name=WP_005602164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598756.1;locus_tag=D1109_RS05485;product=hypothetical protein;protein_id=WP_005602164.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1162601 1163023 . - . ID=gene-D1109_RS05490;Name=D1109_RS05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05490;old_locus_tag=D1109_05495 NZ_CP031858.1 Protein Homology CDS 1162601 1163023 . - 0 ID=cds-WP_009875209.1;Parent=gene-D1109_RS05490;Dbxref=Genbank:WP_009875209.1;Name=WP_009875209.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598759.1;locus_tag=D1109_RS05490;product=GNAT family N-acetyltransferase;protein_id=WP_009875209.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1163024 1163461 . - . ID=gene-D1109_RS05495;Name=D1109_RS05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05495;old_locus_tag=D1109_05500 NZ_CP031858.1 Protein Homology CDS 1163024 1163461 . - 0 ID=cds-WP_237611477.1;Parent=gene-D1109_RS05495;Dbxref=Genbank:WP_237611477.1;Name=WP_237611477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005615869.1;locus_tag=D1109_RS05495;product=DNA polymerase III subunit chi;protein_id=WP_237611477.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1163780 1164223 . + . ID=gene-D1109_RS05500;Name=lysM;gbkey=Gene;gene=lysM;gene_biotype=protein_coding;locus_tag=D1109_RS05500;old_locus_tag=D1109_05505 NZ_CP031858.1 Protein Homology CDS 1163780 1164223 . + 0 ID=cds-WP_237611478.1;Parent=gene-D1109_RS05500;Dbxref=Genbank:WP_237611478.1;Name=WP_237611478.1;gbkey=CDS;gene=lysM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598764.1;locus_tag=D1109_RS05500;product=peptidoglycan-binding protein LysM;protein_id=WP_237611478.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1164435 1165736 . + . ID=gene-D1109_RS05505;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=D1109_RS05505;old_locus_tag=D1109_05510 NZ_CP031858.1 Protein Homology CDS 1164435 1165736 . + 0 ID=cds-WP_005598766.1;Parent=gene-D1109_RS05505;Dbxref=Genbank:WP_005598766.1;Name=WP_005598766.1;Ontology_term=GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process='de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005602169.1;locus_tag=D1109_RS05505;product=trigger factor;protein_id=WP_005598766.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1165869 1166318 . + . ID=gene-D1109_RS05510;Name=D1109_RS05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05510;old_locus_tag=D1109_05515 NZ_CP031858.1 Protein Homology CDS 1165869 1166318 . + 0 ID=cds-WP_237611479.1;Parent=gene-D1109_RS05510;Dbxref=Genbank:WP_237611479.1;Name=WP_237611479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652343.1;locus_tag=D1109_RS05510;product=rhodanese-like domain-containing protein;protein_id=WP_237611479.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1166343 1166849 . + . ID=gene-D1109_RS05515;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=D1109_RS05515;old_locus_tag=D1109_05520 NZ_CP031858.1 Protein Homology CDS 1166343 1166849 . + 0 ID=cds-WP_237611480.1;Parent=gene-D1109_RS05515;Dbxref=Genbank:WP_237611480.1;Name=WP_237611480.1;Ontology_term=GO:0015031,GO:0051262,GO:0051082;gbkey=CDS;gene=secB;go_function=unfolded protein binding|0051082||IEA;go_process=protein transport|0015031||IEA,protein tetramerization|0051262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005605421.1;locus_tag=D1109_RS05515;product=protein-export chaperone SecB;protein_id=WP_237611480.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1167034 1168044 . + . ID=gene-D1109_RS05520;Name=gpsA;gbkey=Gene;gene=gpsA;gene_biotype=protein_coding;locus_tag=D1109_RS05520;old_locus_tag=D1109_05525 NZ_CP031858.1 Protein Homology CDS 1167034 1168044 . + 0 ID=cds-WP_005598771.1;Parent=gene-D1109_RS05520;Dbxref=Genbank:WP_005598771.1;Name=WP_005598771.1;Ontology_term=GO:0006072,GO:0004367;gbkey=CDS;gene=gpsA;go_function=glycerol-3-phosphate dehydrogenase [NAD+] activity|0004367||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263265.1;locus_tag=D1109_RS05520;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_005598771.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1168056 1168871 . + . ID=gene-D1109_RS05525;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=D1109_RS05525;old_locus_tag=D1109_05530 NZ_CP031858.1 Protein Homology CDS 1168056 1168871 . + 0 ID=cds-WP_005602179.1;Parent=gene-D1109_RS05525;Dbxref=Genbank:WP_005602179.1;Name=WP_005602179.1;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;gene=cysE;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015674390.1;locus_tag=D1109_RS05525;product=serine O-acetyltransferase;protein_id=WP_005602179.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1169066 1170250 . - . ID=gene-D1109_RS05530;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=D1109_RS05530;old_locus_tag=D1109_05535 NZ_CP031858.1 Protein Homology CDS 1169066 1170250 . - 0 ID=cds-WP_009875214.1-2;Parent=gene-D1109_RS05530;Dbxref=Genbank:WP_009875214.1;Name=WP_009875214.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011199348.1;locus_tag=D1109_RS05530;product=elongation factor Tu;protein_id=WP_009875214.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1170364 1170439 . - . ID=gene-D1109_RS05535;Name=D1109_RS05535;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS05535;old_locus_tag=D1109_05540 NZ_CP031858.1 tRNAscan-SE tRNA 1170364 1170439 . - . ID=rna-D1109_RS05535;Parent=gene-D1109_RS05535;anticodon=(pos:complement(1170404..1170406));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS05535;product=tRNA-Thr NZ_CP031858.1 tRNAscan-SE exon 1170364 1170439 . - . ID=exon-D1109_RS05535-1;Parent=rna-D1109_RS05535;anticodon=(pos:complement(1170404..1170406));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS05535;product=tRNA-Thr NZ_CP031858.1 RefSeq gene 1170443 1170517 . - . ID=gene-D1109_RS05540;Name=D1109_RS05540;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS05540;old_locus_tag=D1109_05545 NZ_CP031858.1 tRNAscan-SE tRNA 1170443 1170517 . - . ID=rna-D1109_RS05540;Parent=gene-D1109_RS05540;anticodon=(pos:complement(1170482..1170484));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS05540;product=tRNA-Gly NZ_CP031858.1 tRNAscan-SE exon 1170443 1170517 . - . ID=exon-D1109_RS05540-1;Parent=rna-D1109_RS05540;anticodon=(pos:complement(1170482..1170484));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS05540;product=tRNA-Gly NZ_CP031858.1 RefSeq gene 1170562 1170646 . - . ID=gene-D1109_RS05545;Name=D1109_RS05545;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS05545;old_locus_tag=D1109_05550 NZ_CP031858.1 tRNAscan-SE tRNA 1170562 1170646 . - . ID=rna-D1109_RS05545;Parent=gene-D1109_RS05545;anticodon=(pos:complement(1170610..1170612));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS05545;product=tRNA-Tyr NZ_CP031858.1 tRNAscan-SE exon 1170562 1170646 . - . ID=exon-D1109_RS05545-1;Parent=rna-D1109_RS05545;anticodon=(pos:complement(1170610..1170612));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS05545;product=tRNA-Tyr NZ_CP031858.1 RefSeq gene 1170683 1170758 . - . ID=gene-D1109_RS05550;Name=D1109_RS05550;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS05550;old_locus_tag=D1109_05555 NZ_CP031858.1 tRNAscan-SE tRNA 1170683 1170758 . - . ID=rna-D1109_RS05550;Parent=gene-D1109_RS05550;anticodon=(pos:complement(1170723..1170725));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS05550;product=tRNA-Thr NZ_CP031858.1 tRNAscan-SE exon 1170683 1170758 . - . ID=exon-D1109_RS05550-1;Parent=rna-D1109_RS05550;anticodon=(pos:complement(1170723..1170725));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS05550;product=tRNA-Thr NZ_CP031858.1 RefSeq gene 1171004 1171954 . + . ID=gene-D1109_RS05555;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=D1109_RS05555;old_locus_tag=D1109_05560 NZ_CP031858.1 Protein Homology CDS 1171004 1171954 . + 0 ID=cds-WP_005608808.1;Parent=gene-D1109_RS05555;Dbxref=Genbank:WP_005608808.1;Name=WP_005608808.1;Ontology_term=GO:0015937,GO:0004594;gbkey=CDS;gene=coaA;go_function=pantothenate kinase activity|0004594||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005608808.1;locus_tag=D1109_RS05555;product=type I pantothenate kinase;protein_id=WP_005608808.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1172089 1172631 . + . ID=gene-D1109_RS05560;Name=D1109_RS05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05560;old_locus_tag=D1109_05565 NZ_CP031858.1 Protein Homology CDS 1172089 1172631 . + 0 ID=cds-WP_005598787.1;Parent=gene-D1109_RS05560;Dbxref=Genbank:WP_005598787.1;Name=WP_005598787.1;Ontology_term=GO:0017004,GO:0015036,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=disulfide oxidoreductase activity|0015036||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598787.1;locus_tag=D1109_RS05560;product=DsbE family thiol:disulfide interchange protein;protein_id=WP_005598787.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1172636 1173103 . + . ID=gene-D1109_RS05565;Name=D1109_RS05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05565;old_locus_tag=D1109_05570 NZ_CP031858.1 Protein Homology CDS 1172636 1173103 . + 0 ID=cds-WP_005620566.1;Parent=gene-D1109_RS05565;Dbxref=Genbank:WP_005620566.1;Name=WP_005620566.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015853.2;locus_tag=D1109_RS05565;product=cytochrome c-type biogenesis protein CcmH;protein_id=WP_005620566.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1173103 1174017 . + . ID=gene-D1109_RS05570;Name=ccmI;gbkey=Gene;gene=ccmI;gene_biotype=protein_coding;locus_tag=D1109_RS05570;old_locus_tag=D1109_05575 NZ_CP031858.1 Protein Homology CDS 1173103 1174017 . + 0 ID=cds-WP_005608811.1;Parent=gene-D1109_RS05570;Dbxref=Genbank:WP_005608811.1;Name=WP_005608811.1;Ontology_term=GO:0017004,GO:0051082;gbkey=CDS;gene=ccmI;go_function=unfolded protein binding|0051082||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598791.1;locus_tag=D1109_RS05570;product=c-type cytochrome biogenesis protein CcmI;protein_id=WP_005608811.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1174089 1174673 . + . ID=gene-D1109_RS05575;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;locus_tag=D1109_RS05575;old_locus_tag=D1109_05580 NZ_CP031858.1 Protein Homology CDS 1174089 1174673 . + 0 ID=cds-WP_005598793.1;Parent=gene-D1109_RS05575;Dbxref=Genbank:WP_005598793.1;Name=WP_005598793.1;Ontology_term=GO:0006777;gbkey=CDS;gene=mog;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598793.1;locus_tag=D1109_RS05575;product=molybdopterin adenylyltransferase;protein_id=WP_005598793.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1174793 1175131 . + . ID=gene-D1109_RS05580;Name=glnB;gbkey=Gene;gene=glnB;gene_biotype=protein_coding;locus_tag=D1109_RS05580;old_locus_tag=D1109_05585 NZ_CP031858.1 Protein Homology CDS 1174793 1175131 . + 0 ID=cds-WP_005598795.1;Parent=gene-D1109_RS05580;Dbxref=Genbank:WP_005598795.1;Name=WP_005598795.1;gbkey=CDS;gene=glnB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010880011.1;locus_tag=D1109_RS05580;product=nitrogen regulatory protein P-II;protein_id=WP_005598795.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1175210 1175692 . + . ID=gene-D1109_RS05585;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=D1109_RS05585;old_locus_tag=D1109_05590 NZ_CP031858.1 Protein Homology CDS 1175210 1175692 . + 0 ID=cds-WP_005598797.1;Parent=gene-D1109_RS05585;Dbxref=Genbank:WP_005598797.1;Name=WP_005598797.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005887;gbkey=CDS;gene=lspA;go_component=integral component of plasma membrane|0005887||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015674061.1;locus_tag=D1109_RS05585;product=signal peptidase II;protein_id=WP_005598797.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1175693 1176637 . + . ID=gene-D1109_RS05590;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=D1109_RS05590;old_locus_tag=D1109_05595 NZ_CP031858.1 Protein Homology CDS 1175693 1176637 . + 0 ID=cds-WP_005602191.1;Parent=gene-D1109_RS05590;Dbxref=Genbank:WP_005602191.1;Name=WP_005602191.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263266.1;locus_tag=D1109_RS05590;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_005602191.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1176637 1176885 . + . ID=gene-D1109_RS05595;Name=D1109_RS05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05595;old_locus_tag=D1109_05600 NZ_CP031858.1 Protein Homology CDS 1176637 1176885 . + 0 ID=cds-WP_009875236.1;Parent=gene-D1109_RS05595;Dbxref=Genbank:WP_009875236.1;Name=WP_009875236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651560.1;locus_tag=D1109_RS05595;product=succinate dehydrogenase assembly factor 2;protein_id=WP_009875236.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1176954 1177553 . - . ID=gene-D1109_RS05600;Name=D1109_RS05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05600;old_locus_tag=D1109_05605 NZ_CP031858.1 Protein Homology CDS 1176954 1177553 . - 0 ID=cds-WP_005602193.1;Parent=gene-D1109_RS05600;Dbxref=Genbank:WP_005602193.1;Name=WP_005602193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005602193.1;locus_tag=D1109_RS05600;product=NAD(P)H-binding protein;protein_id=WP_005602193.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1177553 1179370 . - . ID=gene-D1109_RS05605;Name=hutW;gbkey=Gene;gene=hutW;gene_biotype=protein_coding;locus_tag=D1109_RS05605;old_locus_tag=D1109_05610 NZ_CP031858.1 Protein Homology CDS 1177553 1179370 . - 0 ID=cds-WP_017357825.1;Parent=gene-D1109_RS05605;Dbxref=Genbank:WP_017357825.1;Name=WP_017357825.1;Ontology_term=GO:0003824,GO:0051536;gbkey=CDS;gene=hutW;go_function=catalytic activity|0003824||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005620568.1;locus_tag=D1109_RS05605;product=heme anaerobic degradation radical SAM methyltransferase ChuW/HutW;protein_id=WP_017357825.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1179527 1180144 . - . ID=gene-D1109_RS05610;Name=D1109_RS05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05610;old_locus_tag=D1109_05615 NZ_CP031858.1 Protein Homology CDS 1179527 1180144 . - 0 ID=cds-WP_009875238.1;Parent=gene-D1109_RS05610;Dbxref=Genbank:WP_009875238.1;Name=WP_009875238.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875238.1;locus_tag=D1109_RS05610;product=glutathione S-transferase N-terminal domain-containing protein;protein_id=WP_009875238.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1180210 1181460 . - . ID=gene-D1109_RS05615;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=D1109_RS05615;old_locus_tag=D1109_05620 NZ_CP031858.1 Protein Homology CDS 1180210 1181460 . - 0 ID=cds-WP_215578157.1;Parent=gene-D1109_RS05615;Dbxref=Genbank:WP_215578157.1;Name=WP_215578157.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005620569.1;locus_tag=D1109_RS05615;product=diaminopimelate decarboxylase;protein_id=WP_215578157.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1181584 1181697 . - . ID=gene-D1109_RS05620;Name=D1109_RS05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05620;old_locus_tag=D1109_05625 NZ_CP031858.1 Protein Homology CDS 1181584 1181697 . - 0 ID=cds-WP_012263268.1;Parent=gene-D1109_RS05620;Dbxref=Genbank:WP_012263268.1;Name=WP_012263268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005558104.1;locus_tag=D1109_RS05620;product=lipoprotein;protein_id=WP_012263268.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1181876 1182220 . - . ID=gene-D1109_RS05625;Name=frdD;gbkey=Gene;gene=frdD;gene_biotype=protein_coding;locus_tag=D1109_RS05625;old_locus_tag=D1109_05630 NZ_CP031858.1 Protein Homology CDS 1181876 1182220 . - 0 ID=cds-WP_005619584.1;Parent=gene-D1109_RS05625;Dbxref=Genbank:WP_005619584.1;Name=WP_005619584.1;gbkey=CDS;gene=frdD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011200823.1;locus_tag=D1109_RS05625;product=fumarate reductase subunit FrdD;protein_id=WP_005619584.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1182233 1182625 . - . ID=gene-D1109_RS05630;Name=frdC;gbkey=Gene;gene=frdC;gene_biotype=protein_coding;locus_tag=D1109_RS05630;old_locus_tag=D1109_05635 NZ_CP031858.1 Protein Homology CDS 1182233 1182625 . - 0 ID=cds-WP_005598814.1;Parent=gene-D1109_RS05630;Dbxref=Genbank:WP_005598814.1;Name=WP_005598814.1;Ontology_term=GO:0016020;gbkey=CDS;gene=frdC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005720692.1;locus_tag=D1109_RS05630;product=fumarate reductase subunit FrdC;protein_id=WP_005598814.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1182634 1183368 . - . ID=gene-D1109_RS05635;Name=D1109_RS05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05635;old_locus_tag=D1109_05640 NZ_CP031858.1 Protein Homology CDS 1182634 1183368 . - 0 ID=cds-WP_005598817.1;Parent=gene-D1109_RS05635;Dbxref=Genbank:WP_005598817.1;Name=WP_005598817.1;Ontology_term=GO:0006099,GO:0009055,GO:0016491,GO:0051536;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005639269.1;locus_tag=D1109_RS05635;product=succinate dehydrogenase/fumarate reductase iron-sulfur subunit;protein_id=WP_005598817.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1183381 1185180 . - . ID=gene-D1109_RS05640;Name=frdA;gbkey=Gene;gene=frdA;gene_biotype=protein_coding;locus_tag=D1109_RS05640;old_locus_tag=D1109_05645 NZ_CP031858.1 Protein Homology CDS 1183381 1185180 . - 0 ID=cds-WP_005598820.1;Parent=gene-D1109_RS05640;Dbxref=Genbank:WP_005598820.1;Name=WP_005598820.1;Ontology_term=GO:0009061,GO:0022900,GO:0016491,GO:0050660;gbkey=CDS;gene=frdA;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=anaerobic respiration|0009061||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010944100.1;locus_tag=D1109_RS05640;product=fumarate reductase (quinol) flavoprotein subunit;protein_id=WP_005598820.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1185523 1186506 . + . ID=gene-D1109_RS05645;Name=epmA;gbkey=Gene;gene=epmA;gene_biotype=protein_coding;locus_tag=D1109_RS05645;old_locus_tag=D1109_05650 NZ_CP031858.1 Protein Homology CDS 1185523 1186506 . + 0 ID=cds-WP_005615914.1;Parent=gene-D1109_RS05645;Dbxref=Genbank:WP_005615914.1;Name=WP_005615914.1;Ontology_term=GO:0006418,GO:0004812;gbkey=CDS;gene=epmA;go_function=aminoacyl-tRNA ligase activity|0004812||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005605446.1;locus_tag=D1109_RS05645;product=elongation factor P--(R)-beta-lysine ligase;protein_id=WP_005615914.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1186588 1187412 . - . ID=gene-D1109_RS05650;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=D1109_RS05650;old_locus_tag=D1109_05655 NZ_CP031858.1 Protein Homology CDS 1186588 1187412 . - 0 ID=cds-WP_005617994.1;Parent=gene-D1109_RS05650;Dbxref=Genbank:WP_005617994.1;Name=WP_005617994.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263271.1;locus_tag=D1109_RS05650;product=diaminopimelate epimerase;protein_id=WP_005617994.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1187593 1188915 . + . ID=gene-D1109_RS05655;Name=D1109_RS05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05655;old_locus_tag=D1109_05660 NZ_CP031858.1 Protein Homology CDS 1187593 1188915 . + 0 ID=cds-WP_009875241.1;Parent=gene-D1109_RS05655;Dbxref=Genbank:WP_009875241.1;Name=WP_009875241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875241.1;locus_tag=D1109_RS05655;product=anaerobic C4-dicarboxylate transporter;protein_id=WP_009875241.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1188987 1189358 . - . ID=gene-D1109_RS05660;Name=D1109_RS05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05660;old_locus_tag=D1109_05665 NZ_CP031858.1 Protein Homology CDS 1188987 1189358 . - 0 ID=cds-WP_005598830.1;Parent=gene-D1109_RS05660;Dbxref=Genbank:WP_005598830.1;Name=WP_005598830.1;Ontology_term=GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598830.1;locus_tag=D1109_RS05660;product=CrcB family protein;protein_id=WP_005598830.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1189361 1190425 . - . ID=gene-D1109_RS05665;Name=D1109_RS05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05665;old_locus_tag=D1109_05670 NZ_CP031858.1 Protein Homology CDS 1189361 1190425 . - 0 ID=cds-WP_011848610.1;Parent=gene-D1109_RS05665;Dbxref=Genbank:WP_011848610.1;Name=WP_011848610.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009500034.1;locus_tag=D1109_RS05665;product=MFS transporter;protein_id=WP_011848610.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1190520 1191629 . + . ID=gene-D1109_RS05670;Name=D1109_RS05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05670;old_locus_tag=D1109_05675 NZ_CP031858.1 Protein Homology CDS 1190520 1191629 . + 0 ID=cds-WP_012263272.1;Parent=gene-D1109_RS05670;Dbxref=Genbank:WP_012263272.1;Name=WP_012263272.1;Ontology_term=GO:0006040,GO:0009254,GO:0005524,GO:0016773;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875243.1;locus_tag=D1109_RS05670;product=anhydro-N-acetylmuramic acid kinase;protein_id=WP_012263272.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1191683 1192597 . + . ID=gene-D1109_RS05675;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=D1109_RS05675;old_locus_tag=D1109_05680 NZ_CP031858.1 Protein Homology CDS 1191683 1192597 . + 0 ID=cds-WP_237610872.1;Parent=gene-D1109_RS05675;Dbxref=Genbank:WP_237610872.1;Name=WP_237610872.1;Ontology_term=GO:0006040,GO:0009254,GO:0016835;gbkey=CDS;gene=murQ;go_function=carbon-oxygen lyase activity|0016835||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005615923.1;locus_tag=D1109_RS05675;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_237610872.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1192664 1193545 . - . ID=gene-D1109_RS05680;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=D1109_RS05680;old_locus_tag=D1109_05685 NZ_CP031858.1 Protein Homology CDS 1192664 1193545 . - 0 ID=cds-WP_237610873.1;Parent=gene-D1109_RS05680;Dbxref=Genbank:WP_237610873.1;Name=WP_237610873.1;Ontology_term=GO:0006464,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=cellular protein modification process|0006464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598838.1;locus_tag=D1109_RS05680;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_237610873.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1193628 1194095 . - . ID=gene-D1109_RS05685;Name=D1109_RS05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05685;old_locus_tag=D1109_05690 NZ_CP031858.1 Protein Homology CDS 1193628 1194095 . - 0 ID=cds-WP_005602211.1;Parent=gene-D1109_RS05685;Dbxref=Genbank:WP_005602211.1;Name=WP_005602211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005605461.1;locus_tag=D1109_RS05685;product=GNAT family N-acetyltransferase;protein_id=WP_005602211.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1194099 1194359 . - . ID=gene-D1109_RS05690;Name=D1109_RS05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05690;old_locus_tag=D1109_05695 NZ_CP031858.1 Protein Homology CDS 1194099 1194359 . - 0 ID=cds-WP_005619269.1;Parent=gene-D1109_RS05690;Dbxref=Genbank:WP_005619269.1;Name=WP_005619269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005625192.1;locus_tag=D1109_RS05690;product=DUF1778 domain-containing protein;protein_id=WP_005619269.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1194480 1195940 . - . ID=gene-D1109_RS05695;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=D1109_RS05695;old_locus_tag=D1109_05700 NZ_CP031858.1 Protein Homology CDS 1194480 1195940 . - 0 ID=cds-WP_237593341.1;Parent=gene-D1109_RS05695;Dbxref=Genbank:WP_237593341.1;Name=WP_237593341.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=tldD;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618007.1;locus_tag=D1109_RS05695;product=metalloprotease TldD;protein_id=WP_237593341.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1196070 1197329 . + . ID=gene-D1109_RS05700;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=D1109_RS05700;old_locus_tag=D1109_05705 NZ_CP031858.1 Protein Homology CDS 1196070 1197329 . + 0 ID=cds-WP_237610874.1;Parent=gene-D1109_RS05700;Dbxref=Genbank:WP_237610874.1;Name=WP_237610874.1;Ontology_term=GO:0006400,GO:0016879;gbkey=CDS;gene=tilS;go_function=ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005615928.1;locus_tag=D1109_RS05700;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_237610874.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1197356 1197568 . - . ID=gene-D1109_RS05705;Name=D1109_RS05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05705;old_locus_tag=D1109_05710 NZ_CP031858.1 Protein Homology CDS 1197356 1197568 . - 0 ID=cds-WP_237593654.1;Parent=gene-D1109_RS05705;Dbxref=Genbank:WP_237593654.1;Name=WP_237593654.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF036322.2;locus_tag=D1109_RS05705;product=DUF5389 family protein;protein_id=WP_237593654.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1197648 1198541 . - . ID=gene-D1109_RS05710;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=D1109_RS05710;old_locus_tag=D1109_05715 NZ_CP031858.1 Protein Homology CDS 1197648 1198541 . - 0 ID=cds-WP_005598850.1;Parent=gene-D1109_RS05710;Dbxref=Genbank:WP_005598850.1;Name=WP_005598850.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005605467.1;locus_tag=D1109_RS05710;product=site-specific tyrosine recombinase XerD;protein_id=WP_005598850.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1198655 1198730 . - . ID=gene-D1109_RS05715;Name=D1109_RS05715;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS05715;old_locus_tag=D1109_05720 NZ_CP031858.1 tRNAscan-SE tRNA 1198655 1198730 . - . ID=rna-D1109_RS05715;Parent=gene-D1109_RS05715;anticodon=(pos:complement(1198695..1198697));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS05715;product=tRNA-Trp NZ_CP031858.1 tRNAscan-SE exon 1198655 1198730 . - . ID=exon-D1109_RS05715-1;Parent=rna-D1109_RS05715;anticodon=(pos:complement(1198695..1198697));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS05715;product=tRNA-Trp NZ_CP031858.1 RefSeq gene 1198780 1198856 . - . ID=gene-D1109_RS05720;Name=D1109_RS05720;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS05720;old_locus_tag=D1109_05725 NZ_CP031858.1 tRNAscan-SE tRNA 1198780 1198856 . - . ID=rna-D1109_RS05720;Parent=gene-D1109_RS05720;anticodon=(pos:complement(1198820..1198822));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS05720;product=tRNA-Asp NZ_CP031858.1 tRNAscan-SE exon 1198780 1198856 . - . ID=exon-D1109_RS05720-1;Parent=rna-D1109_RS05720;anticodon=(pos:complement(1198820..1198822));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS05720;product=tRNA-Asp NZ_CP031858.1 RefSeq gene 1198869 1198984 . - . ID=gene-D1109_RS05725;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=D1109_RS05725;old_locus_tag=D1109_05730 NZ_CP031858.1 cmsearch rRNA 1198869 1198984 . - . ID=rna-D1109_RS05725;Parent=gene-D1109_RS05725;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D1109_RS05725;product=5S ribosomal RNA NZ_CP031858.1 cmsearch exon 1198869 1198984 . - . ID=exon-D1109_RS05725-1;Parent=rna-D1109_RS05725;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D1109_RS05725;product=5S ribosomal RNA NZ_CP031858.1 RefSeq gene 1199041 1199156 . - . ID=gene-D1109_RS05730;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=D1109_RS05730;old_locus_tag=D1109_05735 NZ_CP031858.1 cmsearch rRNA 1199041 1199156 . - . ID=rna-D1109_RS05730;Parent=gene-D1109_RS05730;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D1109_RS05730;product=5S ribosomal RNA NZ_CP031858.1 cmsearch exon 1199041 1199156 . - . ID=exon-D1109_RS05730-1;Parent=rna-D1109_RS05730;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D1109_RS05730;product=5S ribosomal RNA NZ_CP031858.1 RefSeq gene 1199268 1202169 . - . ID=gene-D1109_RS05735;Name=D1109_RS05735;gbkey=Gene;gene_biotype=rRNA;locus_tag=D1109_RS05735;old_locus_tag=D1109_05740 NZ_CP031858.1 cmsearch rRNA 1199268 1202169 . - . ID=rna-D1109_RS05735;Parent=gene-D1109_RS05735;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D1109_RS05735;product=23S ribosomal RNA NZ_CP031858.1 cmsearch exon 1199268 1202169 . - . ID=exon-D1109_RS05735-1;Parent=rna-D1109_RS05735;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D1109_RS05735;product=23S ribosomal RNA NZ_CP031858.1 RefSeq gene 1202388 1202463 . - . ID=gene-D1109_RS05740;Name=D1109_RS05740;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS05740;old_locus_tag=D1109_05745 NZ_CP031858.1 tRNAscan-SE tRNA 1202388 1202463 . - . ID=rna-D1109_RS05740;Parent=gene-D1109_RS05740;anticodon=(pos:complement(1202427..1202429));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS05740;product=tRNA-Glu NZ_CP031858.1 tRNAscan-SE exon 1202388 1202463 . - . ID=exon-D1109_RS05740-1;Parent=rna-D1109_RS05740;anticodon=(pos:complement(1202427..1202429));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS05740;product=tRNA-Glu NZ_CP031858.1 RefSeq gene 1202616 1204157 . - . ID=gene-D1109_RS05745;Name=D1109_RS05745;gbkey=Gene;gene_biotype=rRNA;locus_tag=D1109_RS05745;old_locus_tag=D1109_05750 NZ_CP031858.1 cmsearch rRNA 1202616 1204157 . - . ID=rna-D1109_RS05745;Parent=gene-D1109_RS05745;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D1109_RS05745;product=16S ribosomal RNA NZ_CP031858.1 cmsearch exon 1202616 1204157 . - . ID=exon-D1109_RS05745-1;Parent=rna-D1109_RS05745;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D1109_RS05745;product=16S ribosomal RNA NZ_CP031858.1 RefSeq gene 1204356 1204432 . - . ID=gene-D1109_RS05750;Name=D1109_RS05750;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS05750;old_locus_tag=D1109_05755 NZ_CP031858.1 tRNAscan-SE tRNA 1204356 1204432 . - . ID=rna-D1109_RS05750;Parent=gene-D1109_RS05750;anticodon=(pos:complement(1204396..1204398));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS05750;product=tRNA-Pro NZ_CP031858.1 tRNAscan-SE exon 1204356 1204432 . - . ID=exon-D1109_RS05750-1;Parent=rna-D1109_RS05750;anticodon=(pos:complement(1204396..1204398));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS05750;product=tRNA-Pro NZ_CP031858.1 RefSeq gene 1204461 1204536 . - . ID=gene-D1109_RS05755;Name=D1109_RS05755;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS05755;old_locus_tag=D1109_05760 NZ_CP031858.1 tRNAscan-SE tRNA 1204461 1204536 . - . ID=rna-D1109_RS05755;Parent=gene-D1109_RS05755;anticodon=(pos:complement(1204501..1204503));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS05755;product=tRNA-His NZ_CP031858.1 tRNAscan-SE exon 1204461 1204536 . - . ID=exon-D1109_RS05755-1;Parent=rna-D1109_RS05755;anticodon=(pos:complement(1204501..1204503));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS05755;product=tRNA-His NZ_CP031858.1 RefSeq gene 1204567 1204643 . - . ID=gene-D1109_RS05760;Name=D1109_RS05760;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS05760;old_locus_tag=D1109_05765 NZ_CP031858.1 tRNAscan-SE tRNA 1204567 1204643 . - . ID=rna-D1109_RS05760;Parent=gene-D1109_RS05760;anticodon=(pos:complement(1204607..1204609));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS05760;product=tRNA-Arg NZ_CP031858.1 tRNAscan-SE exon 1204567 1204643 . - . ID=exon-D1109_RS05760-1;Parent=rna-D1109_RS05760;anticodon=(pos:complement(1204607..1204609));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS05760;product=tRNA-Arg NZ_CP031858.1 RefSeq gene 1204803 1205528 . - . ID=gene-D1109_RS05765;Name=rffM;gbkey=Gene;gene=rffM;gene_biotype=protein_coding;locus_tag=D1109_RS05765;old_locus_tag=D1109_05770 NZ_CP031858.1 Protein Homology CDS 1204803 1205528 . - 0 ID=cds-WP_005602224.1;Parent=gene-D1109_RS05765;Dbxref=Genbank:WP_005602224.1;Name=WP_005602224.1;gbkey=CDS;gene=rffM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005615937.1;locus_tag=D1109_RS05765;product=lipopolysaccharide N-acetylmannosaminouronosyltransferase;protein_id=WP_005602224.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1205512 1206849 . - . ID=gene-D1109_RS05770;Name=wzyE;gbkey=Gene;gene=wzyE;gene_biotype=protein_coding;locus_tag=D1109_RS05770;old_locus_tag=D1109_05775 NZ_CP031858.1 Protein Homology CDS 1205512 1206849 . - 0 ID=cds-WP_012478551.1;Parent=gene-D1109_RS05770;Dbxref=Genbank:WP_012478551.1;Name=WP_012478551.1;Ontology_term=GO:0009246,GO:0016021;gbkey=CDS;gene=wzyE;go_component=integral component of membrane|0016021||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005608909.1;locus_tag=D1109_RS05770;product=ECA oligosaccharide polymerase;protein_id=WP_012478551.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1206846 1207916 . - . ID=gene-D1109_RS05775;Name=D1109_RS05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05775;old_locus_tag=D1109_05780 NZ_CP031858.1 Protein Homology CDS 1206846 1207916 . - 0 ID=cds-WP_237610875.1;Parent=gene-D1109_RS05775;Dbxref=Genbank:WP_237610875.1;Name=WP_237610875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874558.1;locus_tag=D1109_RS05775;product=TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase;protein_id=WP_237610875.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1208195 1209850 . + . ID=gene-D1109_RS05780;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;gene_synonym=priS;locus_tag=D1109_RS05780;old_locus_tag=D1109_05785 NZ_CP031858.1 Protein Homology CDS 1208195 1209850 . + 0 ID=cds-WP_009874559.1;Parent=gene-D1109_RS05780;Dbxref=Genbank:WP_009874559.1;Name=WP_009874559.1;Ontology_term=GO:0016661,GO:0051536;gbkey=CDS;gene=hcp;go_function=oxidoreductase activity%2C acting on other nitrogenous compounds as donors|0016661||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005819099.1;locus_tag=D1109_RS05780;product=hydroxylamine reductase;protein_id=WP_009874559.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1209973 1210992 . + . ID=gene-D1109_RS05785;Name=hcr;gbkey=Gene;gene=hcr;gene_biotype=protein_coding;locus_tag=D1109_RS05785;old_locus_tag=D1109_05790 NZ_CP031858.1 Protein Homology CDS 1209973 1210992 . + 0 ID=cds-WP_005598866.1;Parent=gene-D1109_RS05785;Dbxref=Genbank:WP_005598866.1;Name=WP_005598866.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=hcr;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005613098.1;locus_tag=D1109_RS05785;product=NADH oxidoreductase;protein_id=WP_005598866.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1211034 1212284 . - . ID=gene-D1109_RS05790;Name=wzxE;gbkey=Gene;gene=wzxE;gene_biotype=protein_coding;locus_tag=D1109_RS05790;old_locus_tag=D1109_05795 NZ_CP031858.1 Protein Homology CDS 1211034 1212284 . - 0 ID=cds-WP_005602235.1;Parent=gene-D1109_RS05790;Dbxref=Genbank:WP_005602235.1;Name=WP_005602235.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzxE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011848612.1;locus_tag=D1109_RS05790;product=lipid III flippase WzxE;protein_id=WP_005602235.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1212272 1213417 . - . ID=gene-D1109_RS05795;Name=rffA;gbkey=Gene;gene=rffA;gene_biotype=protein_coding;gene_synonym=fcnA,wecE;locus_tag=D1109_RS05795;old_locus_tag=D1109_05800 NZ_CP031858.1 Protein Homology CDS 1212272 1213417 . - 0 ID=cds-WP_005602237.1;Parent=gene-D1109_RS05795;Dbxref=Genbank:WP_005602237.1;Name=WP_005602237.1;Ontology_term=GO:0009246,GO:0019180;gbkey=CDS;gene=rffA;go_function=dTDP-4-amino-4%2C6-dideoxygalactose transaminase activity|0019180||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618029.1;locus_tag=D1109_RS05795;product=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;protein_id=WP_005602237.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1213424 1214047 . - . ID=gene-D1109_RS05800;Name=rffC;gbkey=Gene;gene=rffC;gene_biotype=protein_coding;gene_synonym=wecD;locus_tag=D1109_RS05800;old_locus_tag=D1109_05805 NZ_CP031858.1 Protein Homology CDS 1213424 1214047 . - 0 ID=cds-WP_005602239.1;Parent=gene-D1109_RS05800;Dbxref=Genbank:WP_005602239.1;Name=WP_005602239.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rffC;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598871.1;locus_tag=D1109_RS05800;product=dTDP-4-amino-4%2C6-dideoxy-D-galactose acyltransferase;protein_id=WP_005602239.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1214047 1215318 . - . ID=gene-D1109_RS05805;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=D1109_RS05805;old_locus_tag=D1109_05810 NZ_CP031858.1 Protein Homology CDS 1214047 1215318 . - 0 ID=cds-WP_237610876.1;Parent=gene-D1109_RS05805;Dbxref=Genbank:WP_237610876.1;Name=WP_237610876.1;Ontology_term=GO:0009246,GO:0051287,GO:0089714;gbkey=CDS;gene=wecC;go_function=NAD binding|0051287||IEA,UDP-N-acetyl-D-mannosamine dehydrogenase activity|0089714||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263280.1;locus_tag=D1109_RS05805;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=WP_237610876.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1215397 1216533 . - . ID=gene-D1109_RS05810;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=D1109_RS05810;old_locus_tag=D1109_05815 NZ_CP031858.1 Protein Homology CDS 1215397 1216533 . - 0 ID=cds-WP_005598875.1;Parent=gene-D1109_RS05810;Dbxref=Genbank:WP_005598875.1;Name=WP_005598875.1;Ontology_term=GO:0009103,GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598875.1;locus_tag=D1109_RS05810;product=UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing);protein_id=WP_005598875.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1216517 1217395 . - . ID=gene-D1109_RS05815;Name=D1109_RS05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05815;old_locus_tag=D1109_05820 NZ_CP031858.1 Protein Homology CDS 1216517 1217395 . - 0 ID=cds-WP_009874562.1;Parent=gene-D1109_RS05815;Dbxref=Genbank:WP_009874562.1;Name=WP_009874562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005619148.1;locus_tag=D1109_RS05815;product=transporter;protein_id=WP_009874562.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1217430 1218503 . - . ID=gene-D1109_RS05820;Name=wecA;gbkey=Gene;gene=wecA;gene_biotype=protein_coding;locus_tag=D1109_RS05820;old_locus_tag=D1109_05825 NZ_CP031858.1 Protein Homology CDS 1217430 1218503 . - 0 ID=cds-WP_005602248.1;Parent=gene-D1109_RS05820;Dbxref=Genbank:WP_005602248.1;Name=WP_005602248.1;Ontology_term=GO:0009246,GO:0016780;gbkey=CDS;gene=wecA;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874563.1;locus_tag=D1109_RS05820;product=UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase;protein_id=WP_005602248.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1218801 1220081 . + . ID=gene-D1109_RS05825;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=D1109_RS05825;old_locus_tag=D1109_05830 NZ_CP031858.1 Protein Homology CDS 1218801 1220081 . + 0 ID=cds-WP_009874564.1;Parent=gene-D1109_RS05825;Dbxref=Genbank:WP_009874564.1;Name=WP_009874564.1;Ontology_term=GO:0006779,GO:0042286;gbkey=CDS;gene=hemL;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005613104.1;locus_tag=D1109_RS05825;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_009874564.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1220136 1221203 . - . ID=gene-D1109_RS05830;Name=D1109_RS05830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05830;old_locus_tag=D1109_05835 NZ_CP031858.1 Protein Homology CDS 1220136 1221203 . - 0 ID=cds-WP_237610877.1;Parent=gene-D1109_RS05830;Dbxref=Genbank:WP_237610877.1;Name=WP_237610877.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874565.1;locus_tag=D1109_RS05830;product=MFS transporter;protein_id=WP_237610877.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1221223 1222794 . - . ID=gene-D1109_RS05835;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=D1109_RS05835;old_locus_tag=D1109_05840 NZ_CP031858.1 Protein Homology CDS 1221223 1222794 . - 0 ID=cds-WP_237610878.1;Parent=gene-D1109_RS05835;Dbxref=Genbank:WP_237610878.1;Name=WP_237610878.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012478553.1;locus_tag=D1109_RS05835;product=murein biosynthesis integral membrane protein MurJ;protein_id=WP_237610878.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1223186 1223449 . + . ID=gene-D1109_RS05840;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=D1109_RS05840;old_locus_tag=D1109_05845 NZ_CP031858.1 Protein Homology CDS 1223186 1223449 . + 0 ID=cds-WP_005619152.1;Parent=gene-D1109_RS05840;Dbxref=Genbank:WP_005619152.1;Name=WP_005619152.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsT;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117633.1;locus_tag=D1109_RS05840;product=30S ribosomal protein S20;protein_id=WP_005619152.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1223506 1224882 . - . ID=gene-D1109_RS05845;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=D1109_RS05845;old_locus_tag=D1109_05850 NZ_CP031858.1 Protein Homology CDS 1223506 1224882 . - 0 ID=cds-WP_009874566.1;Parent=gene-D1109_RS05845;Dbxref=Genbank:WP_009874566.1;Name=WP_009874566.1;Ontology_term=GO:0006813,GO:0015079,GO:0016020;gbkey=CDS;gene=trkA;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010945728.1;locus_tag=D1109_RS05845;product=Trk system potassium transporter TrkA;protein_id=WP_009874566.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1224932 1226230 . - . ID=gene-D1109_RS05850;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=D1109_RS05850;old_locus_tag=D1109_05855 NZ_CP031858.1 Protein Homology CDS 1224932 1226230 . - 0 ID=cds-WP_005602255.1;Parent=gene-D1109_RS05850;Dbxref=Genbank:WP_005602255.1;Name=WP_005602255.1;Ontology_term=GO:0001510,GO:0006355,GO:0006364,GO:0008649;gbkey=CDS;gene=rsmB;go_function=rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA,regulation of transcription%2C DNA-templated|0006355||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005608927.1;locus_tag=D1109_RS05850;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_005602255.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1226244 1228079 . - . ID=gene-D1109_RS05855;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=D1109_RS05855;old_locus_tag=D1109_05860 NZ_CP031858.1 Protein Homology CDS 1226244 1228079 . - 0 ID=cds-WP_237610879.1;Parent=gene-D1109_RS05855;Dbxref=Genbank:WP_237610879.1;Name=WP_237610879.1;Ontology_term=GO:0001514,GO:0006414,GO:0003746;gbkey=CDS;gene=selB;go_function=translation elongation factor activity|0003746||IEA;go_process=selenocysteine incorporation|0001514||IEA,translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005608929.1;locus_tag=D1109_RS05855;product=selenocysteine-specific translation elongation factor;protein_id=WP_237610879.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1228076 1229461 . - . ID=gene-D1109_RS05860;Name=selA;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=D1109_RS05860;old_locus_tag=D1109_05865 NZ_CP031858.1 Protein Homology CDS 1228076 1229461 . - 0 ID=cds-WP_039709319.1;Parent=gene-D1109_RS05860;Dbxref=Genbank:WP_039709319.1;Name=WP_039709319.1;Ontology_term=GO:0016260,GO:0004125;gbkey=CDS;gene=selA;go_function=L-seryl-tRNASec selenium transferase activity|0004125||IEA;go_process=selenocysteine biosynthetic process|0016260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005602259.1;locus_tag=D1109_RS05860;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=WP_039709319.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1229528 1229622 . + . ID=gene-D1109_RS05865;Name=D1109_RS05865;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS05865;old_locus_tag=D1109_05870 NZ_CP031858.1 tRNAscan-SE tRNA 1229528 1229622 . + . ID=rna-D1109_RS05865;Parent=gene-D1109_RS05865;anticodon=(pos:1229562..1229564);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS05865;product=tRNA-Sec NZ_CP031858.1 tRNAscan-SE exon 1229528 1229622 . + . ID=exon-D1109_RS05865-1;Parent=rna-D1109_RS05865;anticodon=(pos:1229562..1229564);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS05865;product=tRNA-Sec NZ_CP031858.1 RefSeq gene 1229638 1230081 . + . ID=gene-D1109_RS05870;Name=mioC;gbkey=Gene;gene=mioC;gene_biotype=protein_coding;locus_tag=D1109_RS05870;old_locus_tag=D1109_05875 NZ_CP031858.1 Protein Homology CDS 1229638 1230081 . + 0 ID=cds-WP_039709598.1;Parent=gene-D1109_RS05870;Dbxref=Genbank:WP_039709598.1;Name=WP_039709598.1;Ontology_term=GO:0010181;gbkey=CDS;gene=mioC;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005605493.1;locus_tag=D1109_RS05870;product=FMN-binding protein MioC;protein_id=WP_039709598.1;transl_table=11 NZ_CP031858.1 RefSeq pseudogene 1230919 1232361 . - . ID=gene-D1109_RS05875;Name=D1109_RS05875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D1109_RS05875;old_locus_tag=D1109_05885;pseudo=true NZ_CP031858.1 Protein Homology CDS 1230919 1232361 . - 0 ID=cds-D1109_RS05875;Parent=gene-D1109_RS05875;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016533685.1;locus_tag=D1109_RS05875;product=carbohydrate kinase;pseudo=true;transl_table=11 NZ_CP031858.1 RefSeq gene 1232376 1232771 . - . ID=gene-D1109_RS05880;Name=D1109_RS05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05880;old_locus_tag=D1109_05890 NZ_CP031858.1 Protein Homology CDS 1232376 1232771 . - 0 ID=cds-WP_005598895.1;Parent=gene-D1109_RS05880;Dbxref=Genbank:WP_005598895.1;Name=WP_005598895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598895.1;locus_tag=D1109_RS05880;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_005598895.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1233194 1233376 . - . ID=gene-D1109_RS05885;Name=D1109_RS05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05885;old_locus_tag=D1109_05895 NZ_CP031858.1 Protein Homology CDS 1233194 1233376 . - 0 ID=cds-WP_005605497.1;Parent=gene-D1109_RS05885;Dbxref=Genbank:WP_005605497.1;Name=WP_005605497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005615962.1;locus_tag=D1109_RS05885;product=hypothetical protein;protein_id=WP_005605497.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1233870 1236677 . - . ID=gene-D1109_RS05890;Name=D1109_RS05890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05890;old_locus_tag=D1109_05900 NZ_CP031858.1 Protein Homology CDS 1233870 1236677 . - 0 ID=cds-WP_009874571.1;Parent=gene-D1109_RS05890;Dbxref=Genbank:WP_009874571.1;Name=WP_009874571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005602264.1;locus_tag=D1109_RS05890;product=lactoferrin/transferrin family TonB-dependent receptor;protein_id=WP_009874571.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1236691 1238334 . - . ID=gene-D1109_RS05895;Name=D1109_RS05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05895;old_locus_tag=D1109_05905 NZ_CP031858.1 Protein Homology CDS 1236691 1238334 . - 0 ID=cds-WP_011848617.1;Parent=gene-D1109_RS05895;Dbxref=Genbank:WP_011848617.1;Name=WP_011848617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005602266.1;locus_tag=D1109_RS05895;product=transferrin-binding protein-like solute binding protein;protein_id=WP_011848617.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1238362 1238772 . - . ID=gene-D1109_RS05900;Name=D1109_RS05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05900;old_locus_tag=D1109_05910 NZ_CP031858.1 Protein Homology CDS 1238362 1238772 . - 0 ID=cds-WP_005598906.1;Parent=gene-D1109_RS05900;Dbxref=Genbank:WP_005598906.1;Name=WP_005598906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005613129.1;locus_tag=D1109_RS05900;product=biopolymer transporter ExbD;protein_id=WP_005598906.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1238772 1239440 . - . ID=gene-D1109_RS05905;Name=D1109_RS05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05905;old_locus_tag=D1109_05915 NZ_CP031858.1 Protein Homology CDS 1238772 1239440 . - 0 ID=cds-WP_005602270.1;Parent=gene-D1109_RS05905;Dbxref=Genbank:WP_005602270.1;Name=WP_005602270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010785999.1;locus_tag=D1109_RS05905;product=MotA/TolQ/ExbB proton channel family protein;protein_id=WP_005602270.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1239462 1240202 . - . ID=gene-D1109_RS05910;Name=D1109_RS05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05910;old_locus_tag=D1109_05920 NZ_CP031858.1 Protein Homology CDS 1239462 1240202 . - 0 ID=cds-WP_237610880.1;Parent=gene-D1109_RS05910;Dbxref=Genbank:WP_237610880.1;Name=WP_237610880.1;Ontology_term=GO:0006810,GO:0015291;gbkey=CDS;go_function=secondary active transmembrane transporter activity|0015291||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005610678.1;locus_tag=D1109_RS05910;product=TonB family protein;protein_id=WP_237610880.1;transl_table=11 NZ_CP031858.1 RefSeq pseudogene 1240478 1240816 . - . ID=gene-D1109_RS05915;Name=D1109_RS05915;end_range=1240816,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D1109_RS05915;old_locus_tag=D1109_05925;partial=true;pseudo=true NZ_CP031858.1 Protein Homology CDS 1240478 1240816 . - 0 ID=cds-D1109_RS05915;Parent=gene-D1109_RS05915;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:1903401;end_range=1240816,.;gbkey=CDS;go_process=L-lysine transmembrane transport|1903401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012621926.1;locus_tag=D1109_RS05915;partial=true;product=LysO family transporter;pseudo=true;transl_table=11 NZ_CP031858.1 RefSeq pseudogene 1240893 1241892 . - . ID=gene-D1109_RS05920;Name=yiaK;gbkey=Gene;gene=yiaK;gene_biotype=pseudogene;locus_tag=D1109_RS05920;old_locus_tag=D1109_05935;pseudo=true NZ_CP031858.1 Protein Homology CDS 1240893 1241892 . - 0 ID=cds-D1109_RS05920;Parent=gene-D1109_RS05920;Note=frameshifted%3B internal stop;Ontology_term=GO:0047559,GO:0070403;gbkey=CDS;gene=yiaK;go_function=3-dehydro-L-gulonate 2-dehydrogenase activity|0047559||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005757429.1;locus_tag=D1109_RS05920;product=3-dehydro-L-gulonate 2-dehydrogenase;pseudo=true;transl_table=11 NZ_CP031858.1 RefSeq gene 1242117 1242659 . + . ID=gene-D1109_RS05925;Name=D1109_RS05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05925;old_locus_tag=D1109_05940 NZ_CP031858.1 Protein Homology CDS 1242117 1242659 . + 0 ID=cds-WP_237610881.1;Parent=gene-D1109_RS05925;Dbxref=Genbank:WP_237610881.1;Name=WP_237610881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005615970.1;locus_tag=D1109_RS05925;product=alpha/beta hydrolase;protein_id=WP_237610881.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1242741 1243292 . - . ID=gene-D1109_RS05930;Name=D1109_RS05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05930;old_locus_tag=D1109_05945 NZ_CP031858.1 Protein Homology CDS 1242741 1243292 . - 0 ID=cds-WP_237610882.1;Parent=gene-D1109_RS05930;Dbxref=Genbank:WP_237610882.1;Name=WP_237610882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005613140.1;locus_tag=D1109_RS05930;product=DUF5358 domain-containing protein;protein_id=WP_237610882.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1243331 1244500 . - . ID=gene-D1109_RS05935;Name=D1109_RS05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05935;old_locus_tag=D1109_05950 NZ_CP031858.1 Protein Homology CDS 1243331 1244500 . - 0 ID=cds-WP_237610883.1;Parent=gene-D1109_RS05935;Dbxref=Genbank:WP_237610883.1;Name=WP_237610883.1;Ontology_term=GO:0000271,GO:0003979,GO:0016616,GO:0051287;gbkey=CDS;go_function=UDP-glucose 6-dehydrogenase activity|0003979||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002992300.1;locus_tag=D1109_RS05935;product=nucleotide sugar dehydrogenase;protein_id=WP_237610883.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1244542 1245222 . - . ID=gene-D1109_RS05940;Name=D1109_RS05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05940;old_locus_tag=D1109_05955 NZ_CP031858.1 Protein Homology CDS 1244542 1245222 . - 0 ID=cds-WP_237610884.1;Parent=gene-D1109_RS05940;Dbxref=Genbank:WP_237610884.1;Name=WP_237610884.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025953.2;locus_tag=D1109_RS05940;product=hypothetical protein;protein_id=WP_237610884.1;transl_table=11 NZ_CP031858.1 RefSeq pseudogene 1245242 1246315 . - . ID=gene-D1109_RS05945;Name=glf;gbkey=Gene;gene=glf;gene_biotype=pseudogene;locus_tag=D1109_RS05945;old_locus_tag=D1109_05960;partial=true;pseudo=true;start_range=.,1245242 NZ_CP031858.1 Protein Homology CDS 1245242 1246315 . - 0 ID=cds-D1109_RS05945;Parent=gene-D1109_RS05945;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0009273,GO:0008767;gbkey=CDS;gene=glf;go_function=UDP-galactopyranose mutase activity|0008767||IEA;go_process=peptidoglycan-based cell wall biogenesis|0009273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652350.1;locus_tag=D1109_RS05945;partial=true;product=UDP-galactopyranose mutase;pseudo=true;start_range=.,1245242;transl_table=11 NZ_CP031858.1 RefSeq gene 1246312 1248348 . - . ID=gene-D1109_RS05950;Name=D1109_RS05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05950;old_locus_tag=D1109_05965 NZ_CP031858.1 Protein Homology CDS 1246312 1248348 . - 0 ID=cds-WP_237610885.1;Parent=gene-D1109_RS05950;Dbxref=Genbank:WP_237610885.1;Name=WP_237610885.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012745.2;locus_tag=D1109_RS05950;product=glycosyltransferase;protein_id=WP_237610885.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1248434 1250131 . - . ID=gene-D1109_RS05955;Name=D1109_RS05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05955;old_locus_tag=D1109_05970 NZ_CP031858.1 GeneMarkS-2+ CDS 1248434 1250131 . - 0 ID=cds-WP_237610886.1;Parent=gene-D1109_RS05955;Dbxref=Genbank:WP_237610886.1;Name=WP_237610886.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=D1109_RS05955;product=hypothetical protein;protein_id=WP_237610886.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1250171 1251571 . - . ID=gene-D1109_RS05960;Name=D1109_RS05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05960;old_locus_tag=D1109_05975 NZ_CP031858.1 Protein Homology CDS 1250171 1251571 . - 0 ID=cds-WP_237610887.1;Parent=gene-D1109_RS05960;Dbxref=Genbank:WP_237610887.1;Name=WP_237610887.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012745.2;locus_tag=D1109_RS05960;product=glycosyltransferase family 2 protein;protein_id=WP_237610887.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1251708 1252868 . + . ID=gene-D1109_RS05965;Name=D1109_RS05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05965;old_locus_tag=D1109_05980 NZ_CP031858.1 Protein Homology CDS 1251708 1252868 . + 0 ID=cds-WP_237610888.1;Parent=gene-D1109_RS05965;Dbxref=Genbank:WP_237610888.1;Name=WP_237610888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005621188.1;locus_tag=D1109_RS05965;product=polysaccharide export protein;protein_id=WP_237610888.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1252894 1254051 . + . ID=gene-D1109_RS05970;Name=D1109_RS05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05970;old_locus_tag=D1109_05985 NZ_CP031858.1 Protein Homology CDS 1252894 1254051 . + 0 ID=cds-WP_237610889.1;Parent=gene-D1109_RS05970;Dbxref=Genbank:WP_237610889.1;Name=WP_237610889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005608964.1;locus_tag=D1109_RS05970;product=capsule biosynthesis protein;protein_id=WP_237610889.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1254051 1254848 . + . ID=gene-D1109_RS05975;Name=D1109_RS05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05975;old_locus_tag=D1109_05990 NZ_CP031858.1 Protein Homology CDS 1254051 1254848 . + 0 ID=cds-WP_005598930.1;Parent=gene-D1109_RS05975;Dbxref=Genbank:WP_005598930.1;Name=WP_005598930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_157140410.1;locus_tag=D1109_RS05975;product=ABC transporter permease;protein_id=WP_005598930.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1254845 1255495 . + . ID=gene-D1109_RS05980;Name=D1109_RS05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05980;old_locus_tag=D1109_05995 NZ_CP031858.1 Protein Homology CDS 1254845 1255495 . + 0 ID=cds-WP_005608966.1;Parent=gene-D1109_RS05980;Dbxref=Genbank:WP_005608966.1;Name=WP_005608966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618062.1;locus_tag=D1109_RS05980;product=ABC transporter ATP-binding protein;protein_id=WP_005608966.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1255845 1257317 . - . ID=gene-D1109_RS05985;Name=modF;gbkey=Gene;gene=modF;gene_biotype=protein_coding;locus_tag=D1109_RS05985;old_locus_tag=D1109_06000 NZ_CP031858.1 Protein Homology CDS 1255845 1257317 . - 0 ID=cds-WP_237610890.1;Parent=gene-D1109_RS05985;Dbxref=Genbank:WP_237610890.1;Name=WP_237610890.1;Ontology_term=GO:0005524;gbkey=CDS;gene=modF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874580.1;locus_tag=D1109_RS05985;product=molybdate ABC transporter ATP-binding protein ModF;protein_id=WP_237610890.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1257413 1258363 . - . ID=gene-D1109_RS05990;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=D1109_RS05990;old_locus_tag=D1109_06005 NZ_CP031858.1 Protein Homology CDS 1257413 1258363 . - 0 ID=cds-WP_005598937.1;Parent=gene-D1109_RS05990;Dbxref=Genbank:WP_005598937.1;Name=WP_005598937.1;Ontology_term=GO:0006431,GO:0004479;gbkey=CDS;gene=fmt;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005621094.1;locus_tag=D1109_RS05990;product=methionyl-tRNA formyltransferase;protein_id=WP_005598937.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1258526 1259476 . - . ID=gene-D1109_RS05995;Name=D1109_RS05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS05995;old_locus_tag=D1109_06010 NZ_CP031858.1 Protein Homology CDS 1258526 1259476 . - 0 ID=cds-WP_237610891.1;Parent=gene-D1109_RS05995;Dbxref=Genbank:WP_237610891.1;Name=WP_237610891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652444.1;locus_tag=D1109_RS05995;product=TAXI family TRAP transporter solute-binding subunit;protein_id=WP_237610891.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1259640 1260266 . + . ID=gene-D1109_RS06000;Name=D1109_RS06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06000;old_locus_tag=D1109_06015 NZ_CP031858.1 Protein Homology CDS 1259640 1260266 . + 0 ID=cds-WP_043947970.1;Parent=gene-D1109_RS06000;Dbxref=Genbank:WP_043947970.1;Name=WP_043947970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005619629.1;locus_tag=D1109_RS06000;product=YigZ family protein;protein_id=WP_043947970.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1260347 1261825 . + . ID=gene-D1109_RS06005;Name=D1109_RS06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06005;old_locus_tag=D1109_06020 NZ_CP031858.1 Protein Homology CDS 1260347 1261825 . + 0 ID=cds-WP_005598944.1;Parent=gene-D1109_RS06005;Dbxref=Genbank:WP_005598944.1;Name=WP_005598944.1;Ontology_term=GO:0015379,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=potassium:chloride symporter activity|0015379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015674320.1;locus_tag=D1109_RS06005;product=TrkH family potassium uptake protein;protein_id=WP_005598944.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1261840 1262367 . + . ID=gene-D1109_RS06010;Name=hemG;gbkey=Gene;gene=hemG;gene_biotype=protein_coding;locus_tag=D1109_RS06010;old_locus_tag=D1109_06025 NZ_CP031858.1 Protein Homology CDS 1261840 1262367 . + 0 ID=cds-WP_237610892.1;Parent=gene-D1109_RS06010;Dbxref=Genbank:WP_237610892.1;Name=WP_237610892.1;gbkey=CDS;gene=hemG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005613176.1;locus_tag=D1109_RS06010;product=menaquinone-dependent protoporphyrinogen IX dehydrogenase;protein_id=WP_237610892.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1262471 1262860 . + . ID=gene-D1109_RS06015;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=D1109_RS06015;old_locus_tag=D1109_06030 NZ_CP031858.1 Protein Homology CDS 1262471 1262860 . + 0 ID=cds-WP_005620517.1;Parent=gene-D1109_RS06015;Dbxref=Genbank:WP_005620517.1;Name=WP_005620517.1;Ontology_term=GO:0034220,GO:0008381;gbkey=CDS;gene=mscL;go_function=mechanosensitive ion channel activity|0008381||IEA;go_process=ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015674322.1;locus_tag=D1109_RS06015;product=large-conductance mechanosensitive channel protein MscL;protein_id=WP_005620517.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1262990 1263982 . - . ID=gene-D1109_RS06020;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=D1109_RS06020;old_locus_tag=D1109_06035 NZ_CP031858.1 Protein Homology CDS 1262990 1263982 . - 0 ID=cds-WP_005598949.1;Parent=gene-D1109_RS06020;Dbxref=Genbank:WP_005598949.1;Name=WP_005598949.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598949.1;locus_tag=D1109_RS06020;product=lipoyl synthase;protein_id=WP_005598949.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1264094 1264750 . - . ID=gene-D1109_RS06025;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=D1109_RS06025;old_locus_tag=D1109_06040 NZ_CP031858.1 Protein Homology CDS 1264094 1264750 . - 0 ID=cds-WP_005598951.1;Parent=gene-D1109_RS06025;Dbxref=Genbank:WP_005598951.1;Name=WP_005598951.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005602314.1;locus_tag=D1109_RS06025;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_005598951.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1264782 1265081 . - . ID=gene-D1109_RS06030;Name=ybeD;gbkey=Gene;gene=ybeD;gene_biotype=protein_coding;locus_tag=D1109_RS06030;old_locus_tag=D1109_06045 NZ_CP031858.1 Protein Homology CDS 1264782 1265081 . - 0 ID=cds-WP_005598954.1;Parent=gene-D1109_RS06030;Dbxref=Genbank:WP_005598954.1;Name=WP_005598954.1;gbkey=CDS;gene=ybeD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651486.1;locus_tag=D1109_RS06030;product=DUF493 family protein YbeD;protein_id=WP_005598954.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1265215 1266393 . - . ID=gene-D1109_RS06035;Name=D1109_RS06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06035;old_locus_tag=D1109_06050 NZ_CP031858.1 Protein Homology CDS 1265215 1266393 . - 0 ID=cds-WP_005602317.1;Parent=gene-D1109_RS06035;Dbxref=Genbank:WP_005602317.1;Name=WP_005602317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005602317.1;locus_tag=D1109_RS06035;product=serine hydrolase;protein_id=WP_005602317.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1266489 1267052 . - . ID=gene-D1109_RS06040;Name=D1109_RS06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06040;old_locus_tag=D1109_06055 NZ_CP031858.1 Protein Homology CDS 1266489 1267052 . - 0 ID=cds-WP_005620516.1;Parent=gene-D1109_RS06040;Dbxref=Genbank:WP_005620516.1;Name=WP_005620516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874584.1;locus_tag=D1109_RS06040;product=septal ring lytic transglycosylase RlpA family protein;protein_id=WP_005620516.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1267227 1268351 . - . ID=gene-D1109_RS06045;Name=rodA;gbkey=Gene;gene=rodA;gene_biotype=protein_coding;locus_tag=D1109_RS06045;old_locus_tag=D1109_06060 NZ_CP031858.1 Protein Homology CDS 1267227 1268351 . - 0 ID=cds-WP_005605551.1;Parent=gene-D1109_RS06045;Dbxref=Genbank:WP_005605551.1;Name=WP_005605551.1;Ontology_term=GO:0008360;gbkey=CDS;gene=rodA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005605551.1;locus_tag=D1109_RS06045;product=rod shape-determining protein RodA;protein_id=WP_005605551.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1268344 1270305 . - . ID=gene-D1109_RS06050;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=D1109_RS06050;old_locus_tag=D1109_06065 NZ_CP031858.1 Protein Homology CDS 1268344 1270305 . - 0 ID=cds-WP_005598963.1;Parent=gene-D1109_RS06050;Dbxref=Genbank:WP_005598963.1;Name=WP_005598963.1;Ontology_term=GO:0009252,GO:0003824;gbkey=CDS;gene=mrdA;go_function=catalytic activity|0003824||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005613182.1;locus_tag=D1109_RS06050;product=penicillin-binding protein 2;protein_id=WP_005598963.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1270387 1270854 . - . ID=gene-D1109_RS06055;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=D1109_RS06055;old_locus_tag=D1109_06070 NZ_CP031858.1 Protein Homology CDS 1270387 1270854 . - 0 ID=cds-WP_005598965.1;Parent=gene-D1109_RS06055;Dbxref=Genbank:WP_005598965.1;Name=WP_005598965.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018355406.1;locus_tag=D1109_RS06055;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_005598965.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1270877 1271191 . - . ID=gene-D1109_RS06060;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=D1109_RS06060;old_locus_tag=D1109_06075 NZ_CP031858.1 Protein Homology CDS 1270877 1271191 . - 0 ID=cds-WP_005619625.1;Parent=gene-D1109_RS06060;Dbxref=Genbank:WP_005619625.1;Name=WP_005619625.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015674146.1;locus_tag=D1109_RS06060;product=ribosome silencing factor;protein_id=WP_005619625.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1271417 1274011 . - . ID=gene-D1109_RS06065;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=D1109_RS06065;old_locus_tag=D1109_06080 NZ_CP031858.1 Protein Homology CDS 1271417 1274011 . - 0 ID=cds-WP_005602325.1;Parent=gene-D1109_RS06065;Dbxref=Genbank:WP_005602325.1;Name=WP_005602325.1;Ontology_term=GO:0006298,GO:0005524;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651479.1;locus_tag=D1109_RS06065;product=DNA mismatch repair protein MutS;protein_id=WP_005602325.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1274177 1274926 . - . ID=gene-D1109_RS06070;Name=D1109_RS06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06070;old_locus_tag=D1109_06085 NZ_CP031858.1 Protein Homology CDS 1274177 1274926 . - 0 ID=cds-WP_005602327.1;Parent=gene-D1109_RS06070;Dbxref=Genbank:WP_005602327.1;Name=WP_005602327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015674150.1;locus_tag=D1109_RS06070;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_005602327.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1274948 1275664 . - . ID=gene-D1109_RS06075;Name=D1109_RS06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06075;old_locus_tag=D1109_06090 NZ_CP031858.1 Protein Homology CDS 1274948 1275664 . - 0 ID=cds-WP_005618075.1;Parent=gene-D1109_RS06075;Dbxref=Genbank:WP_005618075.1;Name=WP_005618075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651477.1;locus_tag=D1109_RS06075;product=amino acid ABC transporter permease;protein_id=WP_005618075.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1275813 1277111 . - . ID=gene-D1109_RS06080;Name=D1109_RS06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06080;old_locus_tag=D1109_06095 NZ_CP031858.1 Protein Homology CDS 1275813 1277111 . - 0 ID=cds-WP_009874587.1;Parent=gene-D1109_RS06080;Dbxref=Genbank:WP_009874587.1;Name=WP_009874587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263311.1;locus_tag=D1109_RS06080;product=L-serine ammonia-lyase%2C iron-sulfur-dependent%2C subunit alpha;protein_id=WP_009874587.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1277383 1277877 . + . ID=gene-D1109_RS06085;Name=D1109_RS06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06085;old_locus_tag=D1109_06100 NZ_CP031858.1 Protein Homology CDS 1277383 1277877 . + 0 ID=cds-WP_005602335.1;Parent=gene-D1109_RS06085;Dbxref=Genbank:WP_005602335.1;Name=WP_005602335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005608984.1;locus_tag=D1109_RS06085;product=hemerythrin domain-containing protein;protein_id=WP_005602335.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1277956 1278285 . - . ID=gene-D1109_RS06090;Name=D1109_RS06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06090;old_locus_tag=D1109_06105 NZ_CP031858.1 Protein Homology CDS 1277956 1278285 . - 0 ID=cds-WP_005619623.1;Parent=gene-D1109_RS06090;Dbxref=Genbank:WP_005619623.1;Name=WP_005619623.1;Ontology_term=GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015674209.1;locus_tag=D1109_RS06090;product=SMR family transporter;protein_id=WP_005619623.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1278374 1278664 . - . ID=gene-D1109_RS06095;Name=D1109_RS06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06095;old_locus_tag=D1109_06110 NZ_CP031858.1 Protein Homology CDS 1278374 1278664 . - 0 ID=cds-WP_005602339.1;Parent=gene-D1109_RS06095;Dbxref=Genbank:WP_005602339.1;Name=WP_005602339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652148.1;locus_tag=D1109_RS06095;product=YfcZ/YiiS family protein;protein_id=WP_005602339.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1278818 1279378 . - . ID=gene-D1109_RS06100;Name=D1109_RS06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06100;old_locus_tag=D1109_06115 NZ_CP031858.1 Protein Homology CDS 1278818 1279378 . - 0 ID=cds-WP_009874588.1;Parent=gene-D1109_RS06100;Dbxref=Genbank:WP_009874588.1;Name=WP_009874588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005621764.1;locus_tag=D1109_RS06100;product=tellurite resistance TerB family protein;protein_id=WP_009874588.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1279551 1279844 . - . ID=gene-D1109_RS06105;Name=D1109_RS06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06105;old_locus_tag=D1109_06120 NZ_CP031858.1 Protein Homology CDS 1279551 1279844 . - 0 ID=cds-WP_005598989.1;Parent=gene-D1109_RS06105;Dbxref=Genbank:WP_005598989.1;Name=WP_005598989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005613186.1;locus_tag=D1109_RS06105;product=antibiotic biosynthesis monooxygenase;protein_id=WP_005598989.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1279860 1280672 . - . ID=gene-D1109_RS06110;Name=D1109_RS06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06110;old_locus_tag=D1109_06125 NZ_CP031858.1 Protein Homology CDS 1279860 1280672 . - 0 ID=cds-WP_009874589.1;Parent=gene-D1109_RS06110;Dbxref=Genbank:WP_009874589.1;Name=WP_009874589.1;Ontology_term=GO:0006807;gbkey=CDS;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005613189.1;locus_tag=D1109_RS06110;product=urease accessory protein UreD;protein_id=WP_009874589.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1280841 1281476 . - . ID=gene-D1109_RS06115;Name=ureG;gbkey=Gene;gene=ureG;gene_biotype=protein_coding;locus_tag=D1109_RS06115;old_locus_tag=D1109_06130 NZ_CP031858.1 Protein Homology CDS 1280841 1281476 . - 0 ID=cds-WP_009874590.1;Parent=gene-D1109_RS06115;Dbxref=Genbank:WP_009874590.1;Name=WP_009874590.1;Ontology_term=GO:0019627,GO:0016530,GO:0046872;gbkey=CDS;gene=ureG;go_function=metallochaperone activity|0016530||IEA,metal ion binding|0046872||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263313.1;locus_tag=D1109_RS06115;product=urease accessory protein UreG;protein_id=WP_009874590.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1281497 1282180 . - . ID=gene-D1109_RS06120;Name=D1109_RS06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06120;old_locus_tag=D1109_06135 NZ_CP031858.1 Protein Homology CDS 1281497 1282180 . - 0 ID=cds-WP_009874591.1;Parent=gene-D1109_RS06120;Dbxref=Genbank:WP_009874591.1;Name=WP_009874591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005613193.1;locus_tag=D1109_RS06120;product=urease accessory protein UreF;protein_id=WP_009874591.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1282192 1282755 . - . ID=gene-D1109_RS06125;Name=ureE;gbkey=Gene;gene=ureE;gene_biotype=protein_coding;locus_tag=D1109_RS06125;old_locus_tag=D1109_06140 NZ_CP031858.1 Protein Homology CDS 1282192 1282755 . - 0 ID=cds-WP_042655078.1;Parent=gene-D1109_RS06125;Dbxref=Genbank:WP_042655078.1;Name=WP_042655078.1;gbkey=CDS;gene=ureE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005660985.1;locus_tag=D1109_RS06125;product=urease accessory protein UreE;protein_id=WP_042655078.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1282886 1283503 . - . ID=gene-D1109_RS06130;Name=D1109_RS06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06130;old_locus_tag=D1109_06145 NZ_CP031858.1 Protein Homology CDS 1282886 1283503 . - 0 ID=cds-WP_012263316.1;Parent=gene-D1109_RS06130;Dbxref=Genbank:WP_012263316.1;Name=WP_012263316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012478562.1;locus_tag=D1109_RS06130;product=glutathione S-transferase;protein_id=WP_012263316.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1283627 1285345 . - . ID=gene-D1109_RS06135;Name=ureC;gbkey=Gene;gene=ureC;gene_biotype=protein_coding;locus_tag=D1109_RS06135;old_locus_tag=D1109_06150 NZ_CP031858.1 Protein Homology CDS 1283627 1285345 . - 0 ID=cds-WP_005618089.1;Parent=gene-D1109_RS06135;Dbxref=Genbank:WP_005618089.1;Name=WP_005618089.1;Ontology_term=GO:0019627,GO:0009039,GO:0016151;gbkey=CDS;gene=ureC;go_function=urease activity|0009039||IEA,nickel cation binding|0016151||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015674201.1;locus_tag=D1109_RS06135;product=urease subunit alpha;protein_id=WP_005618089.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1285357 1285662 . - . ID=gene-D1109_RS06140;Name=ureB;gbkey=Gene;gene=ureB;gene_biotype=protein_coding;locus_tag=D1109_RS06140;old_locus_tag=D1109_06155 NZ_CP031858.1 Protein Homology CDS 1285357 1285662 . - 0 ID=cds-WP_005599002.1;Parent=gene-D1109_RS06140;Dbxref=Genbank:WP_005599002.1;Name=WP_005599002.1;Ontology_term=GO:0019627,GO:0009039;gbkey=CDS;gene=ureB;go_function=urease activity|0009039||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015701724.1;locus_tag=D1109_RS06140;product=urease subunit beta;protein_id=WP_005599002.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1285852 1286154 . - . ID=gene-D1109_RS06145;Name=ureA;gbkey=Gene;gene=ureA;gene_biotype=protein_coding;locus_tag=D1109_RS06145;old_locus_tag=D1109_06160 NZ_CP031858.1 Protein Homology CDS 1285852 1286154 . - 0 ID=cds-WP_005599005.1;Parent=gene-D1109_RS06145;Dbxref=Genbank:WP_005599005.1;Name=WP_005599005.1;Ontology_term=GO:0019627,GO:0009039;gbkey=CDS;gene=ureA;go_function=urease activity|0009039||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011503894.1;locus_tag=D1109_RS06145;product=urease subunit gamma;protein_id=WP_005599005.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1286226 1287128 . - . ID=gene-D1109_RS06150;Name=D1109_RS06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06150;old_locus_tag=D1109_06165 NZ_CP031858.1 Protein Homology CDS 1286226 1287128 . - 0 ID=cds-WP_005599006.1;Parent=gene-D1109_RS06150;Dbxref=Genbank:WP_005599006.1;Name=WP_005599006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618091.1;locus_tag=D1109_RS06150;product=urea transporter;protein_id=WP_005599006.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1287166 1287795 . - . ID=gene-D1109_RS06155;Name=D1109_RS06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06155;old_locus_tag=D1109_06170 NZ_CP031858.1 Protein Homology CDS 1287166 1287795 . - 0 ID=cds-WP_005599008.1;Parent=gene-D1109_RS06155;Dbxref=Genbank:WP_005599008.1;Name=WP_005599008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005605606.1;locus_tag=D1109_RS06155;product=energy-coupling factor ABC transporter ATP-binding protein;protein_id=WP_005599008.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1287818 1288435 . - . ID=gene-D1109_RS06160;Name=D1109_RS06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06160;old_locus_tag=D1109_06175 NZ_CP031858.1 Protein Homology CDS 1287818 1288435 . - 0 ID=cds-WP_005599011.1;Parent=gene-D1109_RS06160;Dbxref=Genbank:WP_005599011.1;Name=WP_005599011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618093.1;locus_tag=D1109_RS06160;product=energy-coupling factor transporter transmembrane protein EcfT;protein_id=WP_005599011.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1288442 1289050 . - . ID=gene-D1109_RS06165;Name=cbiM;gbkey=Gene;gene=cbiM;gene_biotype=protein_coding;locus_tag=D1109_RS06165;old_locus_tag=D1109_06180 NZ_CP031858.1 Protein Homology CDS 1288442 1289050 . - 0 ID=cds-WP_237610893.1;Parent=gene-D1109_RS06165;Dbxref=Genbank:WP_237610893.1;Name=WP_237610893.1;gbkey=CDS;gene=cbiM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599013.1;locus_tag=D1109_RS06165;product=cobalt transporter CbiM;protein_id=WP_237610893.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1289051 1289464 . - . ID=gene-D1109_RS06170;Name=D1109_RS06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06170;old_locus_tag=D1109_06185 NZ_CP031858.1 Protein Homology CDS 1289051 1289464 . - 0 ID=cds-WP_005609004.1;Parent=gene-D1109_RS06170;Dbxref=Genbank:WP_005609004.1;Name=WP_005609004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005609004.1;locus_tag=D1109_RS06170;product=hypothetical protein;protein_id=WP_005609004.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1289533 1290219 . - . ID=gene-D1109_RS06175;Name=D1109_RS06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06175;old_locus_tag=D1109_06190 NZ_CP031858.1 Protein Homology CDS 1289533 1290219 . - 0 ID=cds-WP_011848625.1;Parent=gene-D1109_RS06175;Dbxref=Genbank:WP_011848625.1;Name=WP_011848625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011848625.1;locus_tag=D1109_RS06175;product=DUF4198 domain-containing protein;protein_id=WP_011848625.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1290419 1291318 . + . ID=gene-D1109_RS06180;Name=D1109_RS06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06180;old_locus_tag=D1109_06195 NZ_CP031858.1 Protein Homology CDS 1290419 1291318 . + 0 ID=cds-WP_237610894.1;Parent=gene-D1109_RS06180;Dbxref=Genbank:WP_237610894.1;Name=WP_237610894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874597.1;locus_tag=D1109_RS06180;product=LysR family transcriptional regulator;protein_id=WP_237610894.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1291397 1291858 . - . ID=gene-D1109_RS06185;Name=D1109_RS06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06185;old_locus_tag=D1109_06200 NZ_CP031858.1 Protein Homology CDS 1291397 1291858 . - 0 ID=cds-WP_005613203.1;Parent=gene-D1109_RS06185;Dbxref=Genbank:WP_005613203.1;Name=WP_005613203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005602360.1;locus_tag=D1109_RS06185;product=nuclear transport factor 2 family protein;protein_id=WP_005613203.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1292086 1293951 . - . ID=gene-D1109_RS06190;Name=D1109_RS06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06190;old_locus_tag=D1109_06205 NZ_CP031858.1 Protein Homology CDS 1292086 1293951 . - 0 ID=cds-WP_237610895.1;Parent=gene-D1109_RS06190;Dbxref=Genbank:WP_237610895.1;Name=WP_237610895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263322.1;locus_tag=D1109_RS06190;product=SLC13 family permease;protein_id=WP_237610895.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1294012 1294536 . - . ID=gene-D1109_RS06195;Name=D1109_RS06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06195;old_locus_tag=D1109_06210 NZ_CP031858.1 Protein Homology CDS 1294012 1294536 . - 0 ID=cds-WP_005599023.1;Parent=gene-D1109_RS06195;Dbxref=Genbank:WP_005599023.1;Name=WP_005599023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599023.1;locus_tag=D1109_RS06195;product=MltR family transcriptional regulator;protein_id=WP_005599023.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1294536 1295675 . - . ID=gene-D1109_RS06200;Name=D1109_RS06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06200;old_locus_tag=D1109_06215 NZ_CP031858.1 Protein Homology CDS 1294536 1295675 . - 0 ID=cds-WP_237610896.1;Parent=gene-D1109_RS06200;Dbxref=Genbank:WP_237610896.1;Name=WP_237610896.1;Ontology_term=GO:0019594,GO:0008926;gbkey=CDS;go_function=mannitol-1-phosphate 5-dehydrogenase activity|0008926||IEA;go_process=mannitol metabolic process|0019594||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652125.1;locus_tag=D1109_RS06200;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=WP_237610896.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1295762 1297651 . - . ID=gene-D1109_RS06205;Name=D1109_RS06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06205;old_locus_tag=D1109_06220 NZ_CP031858.1 Protein Homology CDS 1295762 1297651 . - 0 ID=cds-WP_237610897.1;Parent=gene-D1109_RS06205;Dbxref=Genbank:WP_237610897.1;Name=WP_237610897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005605617.1;locus_tag=D1109_RS06205;product=PTS mannitol transporter subunit IICBA;protein_id=WP_237610897.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1297959 1299791 . - . ID=gene-D1109_RS06210;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=D1109_RS06210;old_locus_tag=D1109_06225 NZ_CP031858.1 Protein Homology CDS 1297959 1299791 . - 0 ID=cds-WP_005605621.1;Parent=gene-D1109_RS06210;Dbxref=Genbank:WP_005605621.1;Name=WP_005605621.1;Ontology_term=GO:0006040,GO:0009252,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010945651.1;locus_tag=D1109_RS06210;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_005605621.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1299915 1300673 . - . ID=gene-D1109_RS06215;Name=D1109_RS06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06215;old_locus_tag=D1109_06230 NZ_CP031858.1 Protein Homology CDS 1299915 1300673 . - 0 ID=cds-WP_012263324.1;Parent=gene-D1109_RS06215;Dbxref=Genbank:WP_012263324.1;Name=WP_012263324.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263324.1;locus_tag=D1109_RS06215;product=DeoR family transcriptional regulator;protein_id=WP_012263324.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1300811 1301011 . - . ID=gene-D1109_RS06220;Name=D1109_RS06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06220;old_locus_tag=D1109_06235 NZ_CP031858.1 Protein Homology CDS 1300811 1301011 . - 0 ID=cds-WP_005613221.1;Parent=gene-D1109_RS06220;Dbxref=Genbank:WP_005613221.1;Name=WP_005613221.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618103.1;locus_tag=D1109_RS06220;product=glycine zipper 2TM domain-containing protein;protein_id=WP_005613221.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1301110 1302102 . - . ID=gene-D1109_RS06225;Name=D1109_RS06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06225;old_locus_tag=D1109_06240 NZ_CP031858.1 Protein Homology CDS 1301110 1302102 . - 0 ID=cds-WP_005609018.1;Parent=gene-D1109_RS06225;Dbxref=Genbank:WP_005609018.1;Name=WP_005609018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599030.1;locus_tag=D1109_RS06225;product=glycosyltransferase;protein_id=WP_005609018.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1302151 1304013 . - . ID=gene-D1109_RS06230;Name=D1109_RS06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06230;old_locus_tag=D1109_06245 NZ_CP031858.1 Protein Homology CDS 1302151 1304013 . - 0 ID=cds-WP_237610898.1;Parent=gene-D1109_RS06230;Dbxref=Genbank:WP_237610898.1;Name=WP_237610898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012478567.1;locus_tag=D1109_RS06230;product=adhesin;protein_id=WP_237610898.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1304029 1305360 . - . ID=gene-D1109_RS06235;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=D1109_RS06235;old_locus_tag=D1109_06250 NZ_CP031858.1 Protein Homology CDS 1304029 1305360 . - 0 ID=cds-WP_005613226.1;Parent=gene-D1109_RS06235;Dbxref=Genbank:WP_005613226.1;Name=WP_005613226.1;Ontology_term=GO:0018339,GO:0008172,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=rimO;go_function=S-methyltransferase activity|0008172||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid|0018339||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599034.1;locus_tag=D1109_RS06235;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=WP_005613226.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1305534 1306232 . - . ID=gene-D1109_RS06240;Name=mtnN;gbkey=Gene;gene=mtnN;gene_biotype=protein_coding;locus_tag=D1109_RS06240;old_locus_tag=D1109_06255 NZ_CP031858.1 Protein Homology CDS 1305534 1306232 . - 0 ID=cds-WP_005599035.1;Parent=gene-D1109_RS06240;Dbxref=Genbank:WP_005599035.1;Name=WP_005599035.1;Ontology_term=GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;gene=mtnN;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599035.1;locus_tag=D1109_RS06240;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=WP_005599035.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1306232 1306912 . - . ID=gene-D1109_RS06245;Name=D1109_RS06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06245;old_locus_tag=D1109_06260 NZ_CP031858.1 Protein Homology CDS 1306232 1306912 . - 0 ID=cds-WP_237610899.1;Parent=gene-D1109_RS06245;Dbxref=Genbank:WP_237610899.1;Name=WP_237610899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005613229.1;locus_tag=D1109_RS06245;product=thiol:disulfide interchange protein DsbA/DsbL;protein_id=WP_237610899.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1307006 1307227 . - . ID=gene-D1109_RS06250;Name=D1109_RS06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06250;old_locus_tag=D1109_06265 NZ_CP031858.1 Protein Homology CDS 1307006 1307227 . - 0 ID=cds-WP_005599039.1;Parent=gene-D1109_RS06250;Dbxref=Genbank:WP_005599039.1;Name=WP_005599039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618109.1;locus_tag=D1109_RS06250;product=SlyX family protein;protein_id=WP_005599039.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1307318 1308049 . + . ID=gene-D1109_RS06255;Name=fkpA;gbkey=Gene;gene=fkpA;gene_biotype=protein_coding;locus_tag=D1109_RS06255;old_locus_tag=D1109_06270 NZ_CP031858.1 Protein Homology CDS 1307318 1308049 . + 0 ID=cds-WP_237610900.1;Parent=gene-D1109_RS06255;Dbxref=Genbank:WP_237610900.1;Name=WP_237610900.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;gene=fkpA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005605634.1;locus_tag=D1109_RS06255;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_237610900.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1308161 1308820 . + . ID=gene-D1109_RS06260;Name=D1109_RS06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06260;old_locus_tag=D1109_06275 NZ_CP031858.1 Protein Homology CDS 1308161 1308820 . + 0 ID=cds-WP_005599043.1;Parent=gene-D1109_RS06260;Dbxref=Genbank:WP_005599043.1;Name=WP_005599043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005621273.1;locus_tag=D1109_RS06260;product=transcriptional regulator;protein_id=WP_005599043.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1308820 1309197 . + . ID=gene-D1109_RS06265;Name=tusD;gbkey=Gene;gene=tusD;gene_biotype=protein_coding;locus_tag=D1109_RS06265;old_locus_tag=D1109_06280 NZ_CP031858.1 Protein Homology CDS 1308820 1309197 . + 0 ID=cds-WP_005602379.1;Parent=gene-D1109_RS06265;Dbxref=Genbank:WP_005602379.1;Name=WP_005602379.1;Ontology_term=GO:0008033,GO:0016783;gbkey=CDS;gene=tusD;go_function=sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263328.1;locus_tag=D1109_RS06265;product=sulfurtransferase complex subunit TusD;protein_id=WP_005602379.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1309197 1309571 . + . ID=gene-D1109_RS06270;Name=tusC;gbkey=Gene;gene=tusC;gene_biotype=protein_coding;locus_tag=D1109_RS06270;old_locus_tag=D1109_06285 NZ_CP031858.1 Protein Homology CDS 1309197 1309571 . + 0 ID=cds-WP_237610901.1;Parent=gene-D1109_RS06270;Dbxref=Genbank:WP_237610901.1;Name=WP_237610901.1;gbkey=CDS;gene=tusC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599047.1;locus_tag=D1109_RS06270;product=sulfurtransferase complex subunit TusC;protein_id=WP_237610901.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1309584 1309853 . + . ID=gene-D1109_RS06275;Name=tusB;gbkey=Gene;gene=tusB;gene_biotype=protein_coding;locus_tag=D1109_RS06275;old_locus_tag=D1109_06290 NZ_CP031858.1 Protein Homology CDS 1309584 1309853 . + 0 ID=cds-WP_005602381.1;Parent=gene-D1109_RS06275;Dbxref=Genbank:WP_005602381.1;Name=WP_005602381.1;Ontology_term=GO:0002098,GO:0016782;gbkey=CDS;gene=tusB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599048.1;locus_tag=D1109_RS06275;product=sulfurtransferase complex subunit TusB;protein_id=WP_005602381.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1310097 1310212 . - . ID=gene-D1109_RS06280;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=D1109_RS06280;old_locus_tag=D1109_06295 NZ_CP031858.1 cmsearch rRNA 1310097 1310212 . - . ID=rna-D1109_RS06280;Parent=gene-D1109_RS06280;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D1109_RS06280;product=5S ribosomal RNA NZ_CP031858.1 cmsearch exon 1310097 1310212 . - . ID=exon-D1109_RS06280-1;Parent=rna-D1109_RS06280;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D1109_RS06280;product=5S ribosomal RNA NZ_CP031858.1 RefSeq gene 1310372 1313273 . - . ID=gene-D1109_RS06285;Name=D1109_RS06285;gbkey=Gene;gene_biotype=rRNA;locus_tag=D1109_RS06285;old_locus_tag=D1109_06300 NZ_CP031858.1 cmsearch rRNA 1310372 1313273 . - . ID=rna-D1109_RS06285;Parent=gene-D1109_RS06285;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D1109_RS06285;product=23S ribosomal RNA NZ_CP031858.1 cmsearch exon 1310372 1313273 . - . ID=exon-D1109_RS06285-1;Parent=rna-D1109_RS06285;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D1109_RS06285;product=23S ribosomal RNA NZ_CP031858.1 RefSeq gene 1313492 1313567 . - . ID=gene-D1109_RS06290;Name=D1109_RS06290;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS06290;old_locus_tag=D1109_06305 NZ_CP031858.1 tRNAscan-SE tRNA 1313492 1313567 . - . ID=rna-D1109_RS06290;Parent=gene-D1109_RS06290;anticodon=(pos:complement(1313531..1313533));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS06290;product=tRNA-Glu NZ_CP031858.1 tRNAscan-SE exon 1313492 1313567 . - . ID=exon-D1109_RS06290-1;Parent=rna-D1109_RS06290;anticodon=(pos:complement(1313531..1313533));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS06290;product=tRNA-Glu NZ_CP031858.1 RefSeq gene 1313720 1315261 . - . ID=gene-D1109_RS06295;Name=D1109_RS06295;gbkey=Gene;gene_biotype=rRNA;locus_tag=D1109_RS06295;old_locus_tag=D1109_06310 NZ_CP031858.1 cmsearch rRNA 1313720 1315261 . - . ID=rna-D1109_RS06295;Parent=gene-D1109_RS06295;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D1109_RS06295;product=16S ribosomal RNA NZ_CP031858.1 cmsearch exon 1313720 1315261 . - . ID=exon-D1109_RS06295-1;Parent=rna-D1109_RS06295;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D1109_RS06295;product=16S ribosomal RNA NZ_CP031858.1 RefSeq gene 1315734 1316153 . - . ID=gene-D1109_RS06300;Name=atpC;gbkey=Gene;gene=atpC;gene_biotype=protein_coding;locus_tag=D1109_RS06300;old_locus_tag=D1109_06315 NZ_CP031858.1 Protein Homology CDS 1315734 1316153 . - 0 ID=cds-WP_005599058.1;Parent=gene-D1109_RS06300;Dbxref=Genbank:WP_005599058.1;Name=WP_005599058.1;gbkey=CDS;gene=atpC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651450.1;locus_tag=D1109_RS06300;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_005599058.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1316193 1317566 . - . ID=gene-D1109_RS06305;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=D1109_RS06305;old_locus_tag=D1109_06320 NZ_CP031858.1 Protein Homology CDS 1316193 1317566 . - 0 ID=cds-WP_005602398.1;Parent=gene-D1109_RS06305;Dbxref=Genbank:WP_005602398.1;Name=WP_005602398.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpD;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=ATP synthesis coupled proton transport|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011978979.1;locus_tag=D1109_RS06305;product=F0F1 ATP synthase subunit beta;protein_id=WP_005602398.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1317580 1318446 . - . ID=gene-D1109_RS06310;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=D1109_RS06310;old_locus_tag=D1109_06325 NZ_CP031858.1 Protein Homology CDS 1317580 1318446 . - 0 ID=cds-WP_005599063.1;Parent=gene-D1109_RS06310;Dbxref=Genbank:WP_005599063.1;Name=WP_005599063.1;Ontology_term=GO:0015986,GO:0046933,GO:0045261;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=ATP synthesis coupled proton transport|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011201492.1;locus_tag=D1109_RS06310;product=F0F1 ATP synthase subunit gamma;protein_id=WP_005599063.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1318469 1320010 . - . ID=gene-D1109_RS06315;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=D1109_RS06315;old_locus_tag=D1109_06330 NZ_CP031858.1 Protein Homology CDS 1318469 1320010 . - 0 ID=cds-WP_005602400.1;Parent=gene-D1109_RS06315;Dbxref=Genbank:WP_005602400.1;Name=WP_005602400.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpA;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=ATP synthesis coupled proton transport|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010944086.1;locus_tag=D1109_RS06315;product=F0F1 ATP synthase subunit alpha;protein_id=WP_005602400.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1320023 1320556 . - . ID=gene-D1109_RS06320;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=D1109_RS06320;old_locus_tag=D1109_06335 NZ_CP031858.1 Protein Homology CDS 1320023 1320556 . - 0 ID=cds-WP_005602403.1;Parent=gene-D1109_RS06320;Dbxref=Genbank:WP_005602403.1;Name=WP_005602403.1;Ontology_term=GO:0015986,GO:0046933,GO:0016020;gbkey=CDS;gene=atpH;go_component=membrane|0016020||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=ATP synthesis coupled proton transport|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015674172.1;locus_tag=D1109_RS06320;product=F0F1 ATP synthase subunit delta;protein_id=WP_005602403.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1320570 1321040 . - . ID=gene-D1109_RS06325;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=D1109_RS06325;old_locus_tag=D1109_06340 NZ_CP031858.1 Protein Homology CDS 1320570 1321040 . - 0 ID=cds-WP_237610902.1;Parent=gene-D1109_RS06325;Dbxref=Genbank:WP_237610902.1;Name=WP_237610902.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpF;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=ATP synthesis coupled proton transport|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874987.1;locus_tag=D1109_RS06325;product=F0F1 ATP synthase subunit B;protein_id=WP_237610902.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1321100 1321354 . - . ID=gene-D1109_RS06330;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=D1109_RS06330;old_locus_tag=D1109_06345 NZ_CP031858.1 Protein Homology CDS 1321100 1321354 . - 0 ID=cds-WP_005599073.1;Parent=gene-D1109_RS06330;Dbxref=Genbank:WP_005599073.1;Name=WP_005599073.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=ATP synthesis coupled proton transport|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599073.1;locus_tag=D1109_RS06330;product=F0F1 ATP synthase subunit C;protein_id=WP_005599073.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1321473 1322261 . - . ID=gene-D1109_RS06335;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=D1109_RS06335;old_locus_tag=D1109_06350 NZ_CP031858.1 Protein Homology CDS 1321473 1322261 . - 0 ID=cds-WP_005605648.1;Parent=gene-D1109_RS06335;Dbxref=Genbank:WP_005605648.1;Name=WP_005605648.1;Ontology_term=GO:0015986,GO:0015078,GO:0045263;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex%2C coupling factor F(o)|0045263||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=ATP synthesis coupled proton transport|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248989.1;locus_tag=D1109_RS06335;product=F0F1 ATP synthase subunit A;protein_id=WP_005605648.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1322286 1322669 . - . ID=gene-D1109_RS06340;Name=D1109_RS06340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06340;old_locus_tag=D1109_06355 NZ_CP031858.1 Protein Homology CDS 1322286 1322669 . - 0 ID=cds-WP_005602406.1;Parent=gene-D1109_RS06340;Dbxref=Genbank:WP_005602406.1;Name=WP_005602406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005602406.1;locus_tag=D1109_RS06340;product=ATP synthase subunit I;protein_id=WP_005602406.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1323028 1323645 . - . ID=gene-D1109_RS06345;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=D1109_RS06345;old_locus_tag=D1109_06360 NZ_CP031858.1 Protein Homology CDS 1323028 1323645 . - 0 ID=cds-WP_005599078.1;Parent=gene-D1109_RS06345;Dbxref=Genbank:WP_005599078.1;Name=WP_005599078.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168,GO:0005575;gbkey=CDS;gene=rsmG;go_component=cellular_component|0005575||IEA;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005602408.1;locus_tag=D1109_RS06345;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_005599078.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1323745 1325637 . - . ID=gene-D1109_RS06350;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=D1109_RS06350;old_locus_tag=D1109_06365 NZ_CP031858.1 Protein Homology CDS 1323745 1325637 . - 0 ID=cds-WP_009874985.1;Parent=gene-D1109_RS06350;Dbxref=Genbank:WP_009874985.1;Name=WP_009874985.1;Ontology_term=GO:0002098,GO:0008033,GO:0050660;gbkey=CDS;gene=mnmG;go_function=flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651460.1;locus_tag=D1109_RS06350;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_009874985.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1326087 1326899 . + . ID=gene-D1109_RS06355;Name=D1109_RS06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06355;old_locus_tag=D1109_06370 NZ_CP031858.1 Protein Homology CDS 1326087 1326899 . + 0 ID=cds-WP_005599082.1;Parent=gene-D1109_RS06355;Dbxref=Genbank:WP_005599082.1;Name=WP_005599082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599082.1;locus_tag=D1109_RS06355;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_005599082.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1326949 1327731 . - . ID=gene-D1109_RS06360;Name=D1109_RS06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06360;old_locus_tag=D1109_06375 NZ_CP031858.1 Protein Homology CDS 1326949 1327731 . - 0 ID=cds-WP_237610903.1;Parent=gene-D1109_RS06360;Dbxref=Genbank:WP_237610903.1;Name=WP_237610903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005602412.1;locus_tag=D1109_RS06360;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_237610903.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1327944 1328420 . - . ID=gene-D1109_RS06365;Name=D1109_RS06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06365;old_locus_tag=D1109_06380 NZ_CP031858.1 Protein Homology CDS 1327944 1328420 . - 0 ID=cds-WP_237610904.1;Parent=gene-D1109_RS06365;Dbxref=Genbank:WP_237610904.1;Name=WP_237610904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874984.1;locus_tag=D1109_RS06365;product=YchJ family protein;protein_id=WP_237610904.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1328423 1328800 . - . ID=gene-D1109_RS06370;Name=D1109_RS06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06370;old_locus_tag=D1109_06385 NZ_CP031858.1 Protein Homology CDS 1328423 1328800 . - 0 ID=cds-WP_237610905.1;Parent=gene-D1109_RS06370;Dbxref=Genbank:WP_237610905.1;Name=WP_237610905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599089.1;locus_tag=D1109_RS06370;product=hypothetical protein;protein_id=WP_237610905.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1328888 1329715 . - . ID=gene-D1109_RS06375;Name=manZ;gbkey=Gene;gene=manZ;gene_biotype=protein_coding;locus_tag=D1109_RS06375;old_locus_tag=D1109_06390 NZ_CP031858.1 Protein Homology CDS 1328888 1329715 . - 0 ID=cds-WP_237610906.1;Parent=gene-D1109_RS06375;Dbxref=Genbank:WP_237610906.1;Name=WP_237610906.1;gbkey=CDS;gene=manZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005613241.1;locus_tag=D1109_RS06375;product=PTS mannose transporter subunit IID;protein_id=WP_237610906.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1329726 1330520 . - . ID=gene-D1109_RS06380;Name=D1109_RS06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06380;old_locus_tag=D1109_06395 NZ_CP031858.1 Protein Homology CDS 1329726 1330520 . - 0 ID=cds-WP_005610731.1;Parent=gene-D1109_RS06380;Dbxref=Genbank:WP_005610731.1;Name=WP_005610731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005702201.1;locus_tag=D1109_RS06380;product=PTS mannose/fructose/sorbose transporter subunit IIC;protein_id=WP_005610731.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1330535 1331503 . - . ID=gene-D1109_RS06385;Name=D1109_RS06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06385;old_locus_tag=D1109_06400 NZ_CP031858.1 Protein Homology CDS 1330535 1331503 . - 0 ID=cds-WP_237610907.1;Parent=gene-D1109_RS06385;Dbxref=Genbank:WP_237610907.1;Name=WP_237610907.1;Ontology_term=GO:0008643,GO:0016773;gbkey=CDS;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618127.1;locus_tag=D1109_RS06385;product=mannose/fructose/sorbose PTS transporter subunit IIA;protein_id=WP_237610907.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1331694 1333043 . - . ID=gene-D1109_RS06390;Name=D1109_RS06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06390;old_locus_tag=D1109_06405 NZ_CP031858.1 Protein Homology CDS 1331694 1333043 . - 0 ID=cds-WP_005599098.1;Parent=gene-D1109_RS06390;Dbxref=Genbank:WP_005599098.1;Name=WP_005599098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599098.1;locus_tag=D1109_RS06390;product=GntP family permease;protein_id=WP_005599098.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1333222 1333734 . + . ID=gene-D1109_RS06395;Name=D1109_RS06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06395;old_locus_tag=D1109_06410 NZ_CP031858.1 Protein Homology CDS 1333222 1333734 . + 0 ID=cds-WP_005613248.1;Parent=gene-D1109_RS06395;Dbxref=Genbank:WP_005613248.1;Name=WP_005613248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015674160.1;locus_tag=D1109_RS06395;product=gluconokinase;protein_id=WP_005613248.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1333829 1334827 . - . ID=gene-D1109_RS06400;Name=gntR;gbkey=Gene;gene=gntR;gene_biotype=protein_coding;locus_tag=D1109_RS06400;old_locus_tag=D1109_06415 NZ_CP031858.1 Protein Homology CDS 1333829 1334827 . - 0 ID=cds-WP_005616064.1;Parent=gene-D1109_RS06400;Dbxref=Genbank:WP_005616064.1;Name=WP_005616064.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=gntR;go_function=DNA binding|0003677||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015674159.1;locus_tag=D1109_RS06400;product=gluconate operon transcriptional repressor GntR;protein_id=WP_005616064.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1334965 1335954 . + . ID=gene-D1109_RS06405;Name=D1109_RS06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06405;old_locus_tag=D1109_06420 NZ_CP031858.1 Protein Homology CDS 1334965 1335954 . + 0 ID=cds-WP_237610908.1;Parent=gene-D1109_RS06405;Dbxref=Genbank:WP_237610908.1;Name=WP_237610908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012478568.1;locus_tag=D1109_RS06405;product=substrate-binding domain-containing protein;protein_id=WP_237610908.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1336074 1336493 . + . ID=gene-D1109_RS06410;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=D1109_RS06410;old_locus_tag=D1109_06425 NZ_CP031858.1 Protein Homology CDS 1336074 1336493 . + 0 ID=cds-WP_237610909.1;Parent=gene-D1109_RS06410;Dbxref=Genbank:WP_237610909.1;Name=WP_237610909.1;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005609061.1;locus_tag=D1109_RS06410;product=D-ribose pyranase;protein_id=WP_237610909.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1336506 1337987 . + . ID=gene-D1109_RS06415;Name=rbsA;gbkey=Gene;gene=rbsA;gene_biotype=protein_coding;locus_tag=D1109_RS06415;old_locus_tag=D1109_06430 NZ_CP031858.1 Protein Homology CDS 1336506 1337987 . + 0 ID=cds-WP_237610910.1;Parent=gene-D1109_RS06415;Dbxref=Genbank:WP_237610910.1;Name=WP_237610910.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rbsA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263337.1;locus_tag=D1109_RS06415;product=ribose ABC transporter ATP-binding protein RbsA;protein_id=WP_237610910.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1338040 1338999 . + . ID=gene-D1109_RS06420;Name=rbsC;gbkey=Gene;gene=rbsC;gene_biotype=protein_coding;locus_tag=D1109_RS06420;old_locus_tag=D1109_06435 NZ_CP031858.1 Protein Homology CDS 1338040 1338999 . + 0 ID=cds-WP_237610911.1;Parent=gene-D1109_RS06420;Dbxref=Genbank:WP_237610911.1;Name=WP_237610911.1;Ontology_term=GO:0055085,GO:0022857,GO:0016021;gbkey=CDS;gene=rbsC;go_component=integral component of membrane|0016021||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005602432.1;locus_tag=D1109_RS06420;product=ribose ABC transporter permease;protein_id=WP_237610911.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1339023 1339895 . + . ID=gene-D1109_RS06425;Name=rbsB;gbkey=Gene;gene=rbsB;gene_biotype=protein_coding;locus_tag=D1109_RS06425;old_locus_tag=D1109_06440 NZ_CP031858.1 Protein Homology CDS 1339023 1339895 . + 0 ID=cds-WP_039198367.1;Parent=gene-D1109_RS06425;Dbxref=Genbank:WP_039198367.1;Name=WP_039198367.1;gbkey=CDS;gene=rbsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651473.1;locus_tag=D1109_RS06425;product=ribose ABC transporter substrate-binding protein RbsB;protein_id=WP_039198367.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1339968 1340879 . + . ID=gene-D1109_RS06430;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=D1109_RS06430;old_locus_tag=D1109_06445 NZ_CP031858.1 Protein Homology CDS 1339968 1340879 . + 0 ID=cds-WP_237610912.1;Parent=gene-D1109_RS06430;Dbxref=Genbank:WP_237610912.1;Name=WP_237610912.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599115.1;locus_tag=D1109_RS06430;product=ribokinase;protein_id=WP_237610912.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1341114 1343531 . + . ID=gene-D1109_RS06435;Name=D1109_RS06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06435;old_locus_tag=D1109_06450 NZ_CP031858.1 Protein Homology CDS 1341114 1343531 . + 0 ID=cds-WP_237610913.1;Parent=gene-D1109_RS06435;Dbxref=Genbank:WP_237610913.1;Name=WP_237610913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005620119.1;locus_tag=D1109_RS06435;product=molybdopterin-dependent oxidoreductase;protein_id=WP_237610913.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1343541 1344158 . + . ID=gene-D1109_RS06440;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=D1109_RS06440;old_locus_tag=D1109_06455 NZ_CP031858.1 Protein Homology CDS 1343541 1344158 . + 0 ID=cds-WP_005599119.1;Parent=gene-D1109_RS06440;Dbxref=Genbank:WP_005599119.1;Name=WP_005599119.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005656008.1;locus_tag=D1109_RS06440;product=dimethylsulfoxide reductase subunit B;protein_id=WP_005599119.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1344160 1344993 . + . ID=gene-D1109_RS06445;Name=D1109_RS06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06445;old_locus_tag=D1109_06460 NZ_CP031858.1 Protein Homology CDS 1344160 1344993 . + 0 ID=cds-WP_237610914.1;Parent=gene-D1109_RS06445;Dbxref=Genbank:WP_237610914.1;Name=WP_237610914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005609069.1;locus_tag=D1109_RS06445;product=dimethyl sulfoxide reductase anchor subunit;protein_id=WP_237610914.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1345049 1345654 . + . ID=gene-D1109_RS06450;Name=dmsD;gbkey=Gene;gene=dmsD;gene_biotype=protein_coding;locus_tag=D1109_RS06450;old_locus_tag=D1109_06465 NZ_CP031858.1 Protein Homology CDS 1345049 1345654 . + 0 ID=cds-WP_237592724.1;Parent=gene-D1109_RS06450;Dbxref=Genbank:WP_237592724.1;Name=WP_237592724.1;gbkey=CDS;gene=dmsD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005620121.1;locus_tag=D1109_RS06450;product=Tat proofreading chaperone DmsD;protein_id=WP_237592724.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1345658 1346176 . + . ID=gene-D1109_RS06455;Name=napF;gbkey=Gene;gene=napF;gene_biotype=protein_coding;locus_tag=D1109_RS06455;old_locus_tag=D1109_06470 NZ_CP031858.1 Protein Homology CDS 1345658 1346176 . + 0 ID=cds-WP_237610915.1;Parent=gene-D1109_RS06455;Dbxref=Genbank:WP_237610915.1;Name=WP_237610915.1;Ontology_term=GO:0051539;gbkey=CDS;gene=napF;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263341.1;locus_tag=D1109_RS06455;product=ferredoxin-type protein NapF;protein_id=WP_237610915.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1346173 1346802 . - . ID=gene-D1109_RS06460;Name=D1109_RS06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06460;old_locus_tag=D1109_06475 NZ_CP031858.1 Protein Homology CDS 1346173 1346802 . - 0 ID=cds-WP_237593867.1;Parent=gene-D1109_RS06460;Dbxref=Genbank:WP_237593867.1;Name=WP_237593867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005602450.1;locus_tag=D1109_RS06460;product=class I SAM-dependent methyltransferase;protein_id=WP_237593867.1;transl_table=11 NZ_CP031858.1 RefSeq pseudogene 1347083 1348101 . + . ID=gene-D1109_RS06465;Name=D1109_RS06465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D1109_RS06465;pseudo=true NZ_CP031858.1 Protein Homology CDS 1347083 1348101 . + 0 ID=cds-D1109_RS06465;Parent=gene-D1109_RS06465;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019371.2;locus_tag=D1109_RS06465;product=Abi family protein;pseudo=true;transl_table=11 NZ_CP031858.1 RefSeq gene 1348258 1348899 . - . ID=gene-D1109_RS06470;Name=D1109_RS06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06470;old_locus_tag=D1109_06490 NZ_CP031858.1 Protein Homology CDS 1348258 1348899 . - 0 ID=cds-WP_012263344.1;Parent=gene-D1109_RS06470;Dbxref=Genbank:WP_012263344.1;Name=WP_012263344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599134.1;locus_tag=D1109_RS06470;product=DUF6037 family protein;protein_id=WP_012263344.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1348956 1352852 . - . ID=gene-D1109_RS06475;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=D1109_RS06475;old_locus_tag=D1109_06495 NZ_CP031858.1 Protein Homology CDS 1348956 1352852 . - 0 ID=cds-WP_237610916.1;Parent=gene-D1109_RS06475;Dbxref=Genbank:WP_237610916.1;Name=WP_237610916.1;Ontology_term=GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005620128.1;locus_tag=D1109_RS06475;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_237610916.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1353100 1354116 . - . ID=gene-D1109_RS06480;Name=D1109_RS06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06480;old_locus_tag=D1109_06500 NZ_CP031858.1 Protein Homology CDS 1353100 1354116 . - 0 ID=cds-WP_005613263.1;Parent=gene-D1109_RS06480;Dbxref=Genbank:WP_005613263.1;Name=WP_005613263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011608904.1;locus_tag=D1109_RS06480;product=aldose 1-epimerase family protein;protein_id=WP_005613263.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1354127 1355422 . - . ID=gene-D1109_RS06485;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=D1109_RS06485;old_locus_tag=D1109_06505 NZ_CP031858.1 Protein Homology CDS 1354127 1355422 . - 0 ID=cds-WP_005613264.1;Parent=gene-D1109_RS06485;Dbxref=Genbank:WP_005613264.1;Name=WP_005613264.1;Ontology_term=GO:0015756,GO:0015535,GO:0005887;gbkey=CDS;gene=fucP;go_component=integral component of plasma membrane|0005887||IEA;go_function=fucose:proton symporter activity|0015535||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005760823.1;locus_tag=D1109_RS06485;product=L-fucose:H+ symporter permease;protein_id=WP_005613264.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1355433 1356353 . - . ID=gene-D1109_RS06490;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=D1109_RS06490;old_locus_tag=D1109_06510 NZ_CP031858.1 Protein Homology CDS 1355433 1356353 . - 0 ID=cds-WP_043995158.1;Parent=gene-D1109_RS06490;Dbxref=Genbank:WP_043995158.1;Name=WP_043995158.1;Ontology_term=GO:0019303,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose catabolic process|0019303||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000350273.1;locus_tag=D1109_RS06490;product=ribokinase;protein_id=WP_043995158.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1356524 1357198 . + . ID=gene-D1109_RS06495;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=D1109_RS06495;old_locus_tag=D1109_06515 NZ_CP031858.1 Protein Homology CDS 1356524 1357198 . + 0 ID=cds-WP_005613266.1;Parent=gene-D1109_RS06495;Dbxref=Genbank:WP_005613266.1;Name=WP_005613266.1;Ontology_term=GO:0009264,GO:0004139;gbkey=CDS;gene=deoC;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011608901.1;locus_tag=D1109_RS06495;product=deoxyribose-phosphate aldolase;protein_id=WP_005613266.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1357219 1357965 . + . ID=gene-D1109_RS06500;Name=deoR;gbkey=Gene;gene=deoR;gene_biotype=protein_coding;locus_tag=D1109_RS06500;old_locus_tag=D1109_06520 NZ_CP031858.1 Protein Homology CDS 1357219 1357965 . + 0 ID=cds-WP_043995159.1;Parent=gene-D1109_RS06500;Dbxref=Genbank:WP_043995159.1;Name=WP_043995159.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=deoR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005763479.1;locus_tag=D1109_RS06500;product=DNA-binding transcriptional repressor DeoR;protein_id=WP_043995159.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1358115 1358861 . + . ID=gene-D1109_RS06505;Name=D1109_RS06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06505;old_locus_tag=D1109_06525 NZ_CP031858.1 Protein Homology CDS 1358115 1358861 . + 0 ID=cds-WP_237610917.1;Parent=gene-D1109_RS06505;Dbxref=Genbank:WP_237610917.1;Name=WP_237610917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005616080.1;locus_tag=D1109_RS06505;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_237610917.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1359083 1360849 . + . ID=gene-D1109_RS06510;Name=fucI;gbkey=Gene;gene=fucI;gene_biotype=protein_coding;locus_tag=D1109_RS06510;old_locus_tag=D1109_06530 NZ_CP031858.1 Protein Homology CDS 1359083 1360849 . + 0 ID=cds-WP_237610918.1;Parent=gene-D1109_RS06510;Dbxref=Genbank:WP_237610918.1;Name=WP_237610918.1;Ontology_term=GO:0006005,GO:0008736;gbkey=CDS;gene=fucI;go_function=L-fucose isomerase activity|0008736||IEA;go_process=L-fucose biosynthetic process|0006005||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005619331.1;locus_tag=D1109_RS06510;product=L-fucose isomerase;protein_id=WP_237610918.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1360926 1362359 . + . ID=gene-D1109_RS06515;Name=fucK;gbkey=Gene;gene=fucK;gene_biotype=protein_coding;locus_tag=D1109_RS06515;old_locus_tag=D1109_06535 NZ_CP031858.1 Protein Homology CDS 1360926 1362359 . + 0 ID=cds-WP_237610919.1;Parent=gene-D1109_RS06515;Dbxref=Genbank:WP_237610919.1;Name=WP_237610919.1;Ontology_term=GO:0042355,GO:0008737;gbkey=CDS;gene=fucK;go_function=L-fuculokinase activity|0008737||IEA;go_process=L-fucose catabolic process|0042355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874965.1;locus_tag=D1109_RS06515;product=L-fuculokinase;protein_id=WP_237610919.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1362494 1362928 . + . ID=gene-D1109_RS06520;Name=fucU;gbkey=Gene;gene=fucU;gene_biotype=protein_coding;locus_tag=D1109_RS06520;old_locus_tag=D1109_06540 NZ_CP031858.1 Protein Homology CDS 1362494 1362928 . + 0 ID=cds-WP_005609106.1;Parent=gene-D1109_RS06520;Dbxref=Genbank:WP_005609106.1;Name=WP_005609106.1;Ontology_term=GO:0042354,GO:0016854,GO:0042806;gbkey=CDS;gene=fucU;go_function=racemase and epimerase activity|0016854||IEA,fucose binding|0042806||IEA;go_process=L-fucose metabolic process|0042354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012341412.1;locus_tag=D1109_RS06520;product=L-fucose mutarotase;protein_id=WP_005609106.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1362979 1363629 . + . ID=gene-D1109_RS06525;Name=D1109_RS06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06525;old_locus_tag=D1109_06545 NZ_CP031858.1 Protein Homology CDS 1362979 1363629 . + 0 ID=cds-WP_005609108.1;Parent=gene-D1109_RS06525;Dbxref=Genbank:WP_005609108.1;Name=WP_005609108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005818238.1;locus_tag=D1109_RS06525;product=L-fuculose-phosphate aldolase;protein_id=WP_005609108.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1363683 1364972 . + . ID=gene-D1109_RS06530;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=D1109_RS06530;old_locus_tag=D1109_06550 NZ_CP031858.1 Protein Homology CDS 1363683 1364972 . + 0 ID=cds-WP_237610920.1;Parent=gene-D1109_RS06530;Dbxref=Genbank:WP_237610920.1;Name=WP_237610920.1;Ontology_term=GO:0015756,GO:0015535,GO:0005887;gbkey=CDS;gene=fucP;go_component=integral component of plasma membrane|0005887||IEA;go_function=fucose:proton symporter activity|0015535||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618158.1;locus_tag=D1109_RS06530;product=L-fucose:H+ symporter permease;protein_id=WP_237610920.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1365092 1366243 . + . ID=gene-D1109_RS06535;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=D1109_RS06535;old_locus_tag=D1109_06555 NZ_CP031858.1 Protein Homology CDS 1365092 1366243 . + 0 ID=cds-WP_215577952.1;Parent=gene-D1109_RS06535;Dbxref=Genbank:WP_215577952.1;Name=WP_215577952.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fucO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599152.1;locus_tag=D1109_RS06535;product=lactaldehyde reductase;protein_id=WP_215577952.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1366446 1367087 . + . ID=gene-D1109_RS06540;Name=D1109_RS06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06540;old_locus_tag=D1109_06560 NZ_CP031858.1 Protein Homology CDS 1366446 1367087 . + 0 ID=cds-WP_005602477.1;Parent=gene-D1109_RS06540;Dbxref=Genbank:WP_005602477.1;Name=WP_005602477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005613280.1;locus_tag=D1109_RS06540;product=DUF1440 domain-containing protein;protein_id=WP_005602477.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1367289 1367948 . + . ID=gene-D1109_RS06545;Name=D1109_RS06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06545;old_locus_tag=D1109_06565 NZ_CP031858.1 Protein Homology CDS 1367289 1367948 . + 0 ID=cds-WP_005605700.1;Parent=gene-D1109_RS06545;Dbxref=Genbank:WP_005605700.1;Name=WP_005605700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005605700.1;locus_tag=D1109_RS06545;product=amino acid ABC transporter permease;protein_id=WP_005605700.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1367938 1368606 . + . ID=gene-D1109_RS06550;Name=D1109_RS06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06550;old_locus_tag=D1109_06570 NZ_CP031858.1 Protein Homology CDS 1367938 1368606 . + 0 ID=cds-WP_237610921.1;Parent=gene-D1109_RS06550;Dbxref=Genbank:WP_237610921.1;Name=WP_237610921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015674114.1;locus_tag=D1109_RS06550;product=amino acid ABC transporter permease;protein_id=WP_237610921.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1368607 1369338 . + . ID=gene-D1109_RS06555;Name=D1109_RS06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06555;old_locus_tag=D1109_06575 NZ_CP031858.1 Protein Homology CDS 1368607 1369338 . + 0 ID=cds-WP_005618161.1;Parent=gene-D1109_RS06555;Dbxref=Genbank:WP_005618161.1;Name=WP_005618161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618161.1;locus_tag=D1109_RS06555;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_005618161.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1369399 1370235 . + . ID=gene-D1109_RS06560;Name=D1109_RS06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06560;old_locus_tag=D1109_06580 NZ_CP031858.1 Protein Homology CDS 1369399 1370235 . + 0 ID=cds-WP_005618163.1;Parent=gene-D1109_RS06560;Dbxref=Genbank:WP_005618163.1;Name=WP_005618163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003704691.1;locus_tag=D1109_RS06560;product=cysteine ABC transporter substrate-binding protein;protein_id=WP_005618163.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1370368 1372437 . + . ID=gene-D1109_RS06565;Name=D1109_RS06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06565;old_locus_tag=D1109_06585 NZ_CP031858.1 Protein Homology CDS 1370368 1372437 . + 0 ID=cds-WP_005618164.1;Parent=gene-D1109_RS06565;Dbxref=Genbank:WP_005618164.1;Name=WP_005618164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005605706.1;locus_tag=D1109_RS06565;product=capsular polysaccharide biosynthesis protein;protein_id=WP_005618164.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1372460 1373680 . + . ID=gene-D1109_RS06570;Name=D1109_RS06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06570;old_locus_tag=D1109_06590 NZ_CP031858.1 Protein Homology CDS 1372460 1373680 . + 0 ID=cds-WP_009874959.1;Parent=gene-D1109_RS06570;Dbxref=Genbank:WP_009874959.1;Name=WP_009874959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599166.1;locus_tag=D1109_RS06570;product=capsule biosynthesis protein;protein_id=WP_009874959.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1373749 1374711 . - . ID=gene-D1109_RS06575;Name=D1109_RS06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06575;old_locus_tag=D1109_06595 NZ_CP031858.1 Protein Homology CDS 1373749 1374711 . - 0 ID=cds-WP_042655117.1;Parent=gene-D1109_RS06575;Dbxref=Genbank:WP_042655117.1;Name=WP_042655117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599168.1;locus_tag=D1109_RS06575;product=hypothetical protein;protein_id=WP_042655117.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1374872 1375552 . - . ID=gene-D1109_RS06580;Name=D1109_RS06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06580;old_locus_tag=D1109_06600 NZ_CP031858.1 Protein Homology CDS 1374872 1375552 . - 0 ID=cds-WP_005602494.1;Parent=gene-D1109_RS06580;Dbxref=Genbank:WP_005602494.1;Name=WP_005602494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005712749.1;locus_tag=D1109_RS06580;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_005602494.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1375625 1376092 . - . ID=gene-D1109_RS06585;Name=D1109_RS06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06585;old_locus_tag=D1109_06605 NZ_CP031858.1 Protein Homology CDS 1375625 1376092 . - 0 ID=cds-WP_005599172.1;Parent=gene-D1109_RS06585;Dbxref=Genbank:WP_005599172.1;Name=WP_005599172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005621524.1;locus_tag=D1109_RS06585;product=PTS sugar transporter subunit IIA;protein_id=WP_005599172.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1376170 1377975 . - . ID=gene-D1109_RS06590;Name=D1109_RS06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06590;old_locus_tag=D1109_06610 NZ_CP031858.1 Protein Homology CDS 1376170 1377975 . - 0 ID=cds-WP_005599174.1;Parent=gene-D1109_RS06590;Dbxref=Genbank:WP_005599174.1;Name=WP_005599174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005602498.1;locus_tag=D1109_RS06590;product=PTS ascorbate-specific subunit IIBC;protein_id=WP_005599174.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1378449 1379540 . + . ID=gene-D1109_RS06595;Name=ulaG;gbkey=Gene;gene=ulaG;gene_biotype=protein_coding;locus_tag=D1109_RS06595;old_locus_tag=D1109_06615 NZ_CP031858.1 Protein Homology CDS 1378449 1379540 . + 0 ID=cds-WP_005599176.1;Parent=gene-D1109_RS06595;Dbxref=Genbank:WP_005599176.1;Name=WP_005599176.1;Ontology_term=GO:0019854,GO:0030145,GO:0035460;gbkey=CDS;gene=ulaG;go_function=manganese ion binding|0030145||IEA,L-ascorbate 6-phosphate lactonase activity|0035460||IEA;go_process=L-ascorbic acid catabolic process|0019854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001863918.1;locus_tag=D1109_RS06595;product=L-ascorbate 6-phosphate lactonase;protein_id=WP_005599176.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1379642 1380388 . + . ID=gene-D1109_RS06600;Name=ulaR;gbkey=Gene;gene=ulaR;gene_biotype=protein_coding;locus_tag=D1109_RS06600;old_locus_tag=D1109_06620 NZ_CP031858.1 Protein Homology CDS 1379642 1380388 . + 0 ID=cds-WP_005619347.1;Parent=gene-D1109_RS06600;Dbxref=Genbank:WP_005619347.1;Name=WP_005619347.1;gbkey=CDS;gene=ulaR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005619347.1;locus_tag=D1109_RS06600;product=HTH-type transcriptional regulator UlaR;protein_id=WP_005619347.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1380474 1381334 . + . ID=gene-D1109_RS06605;Name=D1109_RS06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06605;old_locus_tag=D1109_06625 NZ_CP031858.1 Protein Homology CDS 1380474 1381334 . + 0 ID=cds-WP_237610922.1;Parent=gene-D1109_RS06605;Dbxref=Genbank:WP_237610922.1;Name=WP_237610922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005619350.1;locus_tag=D1109_RS06605;product=L-ribulose-5-phosphate 3-epimerase;protein_id=WP_237610922.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1381328 1382041 . + . ID=gene-D1109_RS06610;Name=D1109_RS06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06610;old_locus_tag=D1109_06630 NZ_CP031858.1 Protein Homology CDS 1381328 1382041 . + 0 ID=cds-WP_237610923.1;Parent=gene-D1109_RS06610;Dbxref=Genbank:WP_237610923.1;Name=WP_237610923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005621511.1;locus_tag=D1109_RS06610;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_237610923.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1382193 1382822 . - . ID=gene-D1109_RS06615;Name=D1109_RS06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06615;old_locus_tag=D1109_06635 NZ_CP031858.1 Protein Homology CDS 1382193 1382822 . - 0 ID=cds-WP_005602508.1;Parent=gene-D1109_RS06615;Dbxref=Genbank:WP_005602508.1;Name=WP_005602508.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007526112.1;locus_tag=D1109_RS06615;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_005602508.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1383148 1383501 . + . ID=gene-D1109_RS06620;Name=D1109_RS06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06620 NZ_CP031858.1 GeneMarkS-2+ CDS 1383148 1383501 . + 0 ID=cds-WP_236681835.1;Parent=gene-D1109_RS06620;Dbxref=Genbank:WP_236681835.1;Name=WP_236681835.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=D1109_RS06620;product=hypothetical protein;protein_id=WP_236681835.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1383556 1383885 . + . ID=gene-D1109_RS06625;Name=D1109_RS06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06625 NZ_CP031858.1 Protein Homology CDS 1383556 1383885 . + 0 ID=cds-WP_005602512.1;Parent=gene-D1109_RS06625;Dbxref=Genbank:WP_005602512.1;Name=WP_005602512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005619355.1;locus_tag=D1109_RS06625;product=hypothetical protein;protein_id=WP_005602512.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1384009 1384197 . - . ID=gene-D1109_RS06630;Name=D1109_RS06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06630;old_locus_tag=D1109_06645 NZ_CP031858.1 Protein Homology CDS 1384009 1384197 . - 0 ID=cds-WP_005599189.1;Parent=gene-D1109_RS06630;Dbxref=Genbank:WP_005599189.1;Name=WP_005599189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618181.1;locus_tag=D1109_RS06630;product=hypothetical protein;protein_id=WP_005599189.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1384177 1384665 . + . ID=gene-D1109_RS06635;Name=D1109_RS06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06635;old_locus_tag=D1109_06650 NZ_CP031858.1 Protein Homology CDS 1384177 1384665 . + 0 ID=cds-WP_005620145.1;Parent=gene-D1109_RS06635;Dbxref=Genbank:WP_005620145.1;Name=WP_005620145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012478576.1;locus_tag=D1109_RS06635;product=transferrin-binding protein-like solute binding protein;protein_id=WP_005620145.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1384968 1386218 . + . ID=gene-D1109_RS06640;Name=D1109_RS06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06640;old_locus_tag=D1109_06655 NZ_CP031858.1 Protein Homology CDS 1384968 1386218 . + 0 ID=cds-WP_237611493.1;Parent=gene-D1109_RS06640;Dbxref=Genbank:WP_237611493.1;Name=WP_237611493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618183.1;locus_tag=D1109_RS06640;product=surface lipoprotein assembly modifier;protein_id=WP_237611493.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1386278 1387204 . - . ID=gene-D1109_RS06645;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=D1109_RS06645;old_locus_tag=D1109_06660 NZ_CP031858.1 Protein Homology CDS 1386278 1387204 . - 0 ID=cds-WP_237610924.1;Parent=gene-D1109_RS06645;Dbxref=Genbank:WP_237610924.1;Name=WP_237610924.1;Ontology_term=GO:0005975,GO:0008712;gbkey=CDS;gene=rfaD;go_function=ADP-glyceromanno-heptose 6-epimerase activity|0008712||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005712668.1;locus_tag=D1109_RS06645;product=ADP-glyceromanno-heptose 6-epimerase;protein_id=WP_237610924.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1387344 1387856 . - . ID=gene-D1109_RS06650;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=D1109_RS06650;old_locus_tag=D1109_06665 NZ_CP031858.1 Protein Homology CDS 1387344 1387856 . - 0 ID=cds-WP_237610925.1;Parent=gene-D1109_RS06650;Dbxref=Genbank:WP_237610925.1;Name=WP_237610925.1;Ontology_term=GO:0006464,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=cellular protein modification process|0006464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005621146.1;locus_tag=D1109_RS06650;product=peptide deformylase;protein_id=WP_237610925.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1388042 1389196 . + . ID=gene-D1109_RS06655;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=D1109_RS06655;old_locus_tag=D1109_06670 NZ_CP031858.1 Protein Homology CDS 1388042 1389196 . + 0 ID=cds-WP_237610926.1;Parent=gene-D1109_RS06655;Dbxref=Genbank:WP_237610926.1;Name=WP_237610926.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652153.1;locus_tag=D1109_RS06655;product=DNA-processing protein DprA;protein_id=WP_237610926.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1389240 1391246 . - . ID=gene-D1109_RS06660;Name=D1109_RS06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06660;old_locus_tag=D1109_06675 NZ_CP031858.1 Protein Homology CDS 1389240 1391246 . - 0 ID=cds-WP_237610927.1;Parent=gene-D1109_RS06660;Dbxref=Genbank:WP_237610927.1;Name=WP_237610927.1;Ontology_term=GO:0006857,GO:0035673,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oligopeptide transmembrane transporter activity|0035673||IEA;go_process=oligopeptide transport|0006857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012478577.1;locus_tag=D1109_RS06660;product=oligopeptide transporter%2C OPT family;protein_id=WP_237610927.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1391467 1392822 . - . ID=gene-D1109_RS06665;Name=D1109_RS06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06665;old_locus_tag=D1109_06680 NZ_CP031858.1 Protein Homology CDS 1391467 1392822 . - 0 ID=cds-WP_237610928.1;Parent=gene-D1109_RS06665;Dbxref=Genbank:WP_237610928.1;Name=WP_237610928.1;Ontology_term=GO:0009401;gbkey=CDS;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263365.1;locus_tag=D1109_RS06665;product=PTS ascorbate transporter subunit IIC;protein_id=WP_237610928.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1392831 1393103 . - . ID=gene-D1109_RS06670;Name=D1109_RS06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06670;old_locus_tag=D1109_06685 NZ_CP031858.1 Protein Homology CDS 1392831 1393103 . - 0 ID=cds-WP_005599206.1;Parent=gene-D1109_RS06670;Dbxref=Genbank:WP_005599206.1;Name=WP_005599206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015674216.1;locus_tag=D1109_RS06670;product=PTS sugar transporter subunit IIB;protein_id=WP_005599206.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1393406 1393819 . + . ID=gene-D1109_RS06675;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=D1109_RS06675;old_locus_tag=D1109_06690 NZ_CP031858.1 Protein Homology CDS 1393406 1393819 . + 0 ID=cds-WP_005599209.1;Parent=gene-D1109_RS06675;Dbxref=Genbank:WP_005599209.1;Name=WP_005599209.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652158.1;locus_tag=D1109_RS06675;product=preprotein translocase subunit SecE;protein_id=WP_005599209.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1393821 1394384 . + . ID=gene-D1109_RS06680;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=D1109_RS06680;old_locus_tag=D1109_06695 NZ_CP031858.1 Protein Homology CDS 1393821 1394384 . + 0 ID=cds-WP_005599210.1;Parent=gene-D1109_RS06680;Dbxref=Genbank:WP_005599210.1;Name=WP_005599210.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusG;go_process=DNA-templated transcription%2C termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599210.1;locus_tag=D1109_RS06680;product=transcription termination/antitermination protein NusG;protein_id=WP_005599210.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1394672 1395100 . + . ID=gene-D1109_RS06685;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=D1109_RS06685;old_locus_tag=D1109_06700 NZ_CP031858.1 Protein Homology CDS 1394672 1395100 . + 0 ID=cds-WP_005599211.1;Parent=gene-D1109_RS06685;Dbxref=Genbank:WP_005599211.1;Name=WP_005599211.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplK;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006121495.1;locus_tag=D1109_RS06685;product=50S ribosomal protein L11;protein_id=WP_005599211.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1395105 1395794 . + . ID=gene-D1109_RS06690;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=D1109_RS06690;old_locus_tag=D1109_06705 NZ_CP031858.1 Protein Homology CDS 1395105 1395794 . + 0 ID=cds-WP_005599212.1;Parent=gene-D1109_RS06690;Dbxref=Genbank:WP_005599212.1;Name=WP_005599212.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplA;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010945641.1;locus_tag=D1109_RS06690;product=50S ribosomal protein L1;protein_id=WP_005599212.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1396083 1396574 . + . ID=gene-D1109_RS06695;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=D1109_RS06695;old_locus_tag=D1109_06710 NZ_CP031858.1 Protein Homology CDS 1396083 1396574 . + 0 ID=cds-WP_005619364.1;Parent=gene-D1109_RS06695;Dbxref=Genbank:WP_005619364.1;Name=WP_005619364.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438625.1;locus_tag=D1109_RS06695;product=50S ribosomal protein L10;protein_id=WP_005619364.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1396635 1397003 . + . ID=gene-D1109_RS06700;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=D1109_RS06700;old_locus_tag=D1109_06715 NZ_CP031858.1 Protein Homology CDS 1396635 1397003 . + 0 ID=cds-WP_005599214.1;Parent=gene-D1109_RS06700;Dbxref=Genbank:WP_005599214.1;Name=WP_005599214.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplL;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122872.1;locus_tag=D1109_RS06700;product=50S ribosomal protein L7/L12;protein_id=WP_005599214.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1397167 1397439 . + . ID=gene-D1109_RS06705;Name=D1109_RS06705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06705;old_locus_tag=D1109_06720 NZ_CP031858.1 Protein Homology CDS 1397167 1397439 . + 0 ID=cds-WP_005599215.1;Parent=gene-D1109_RS06705;Dbxref=Genbank:WP_005599215.1;Name=WP_005599215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599215.1;locus_tag=D1109_RS06705;product=helix-turn-helix transcriptional regulator;protein_id=WP_005599215.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1397444 1398700 . + . ID=gene-D1109_RS06710;Name=D1109_RS06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06710;old_locus_tag=D1109_06725 NZ_CP031858.1 Protein Homology CDS 1397444 1398700 . + 0 ID=cds-WP_237610929.1;Parent=gene-D1109_RS06710;Dbxref=Genbank:WP_237610929.1;Name=WP_237610929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005613295.1;locus_tag=D1109_RS06710;product=type II toxin-antitoxin system HipA family toxin;protein_id=WP_237610929.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1398859 1399077 . + . ID=gene-D1109_RS06715;Name=D1109_RS06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06715;old_locus_tag=D1109_06730 NZ_CP031858.1 Protein Homology CDS 1398859 1399077 . + 0 ID=cds-WP_237610930.1;Parent=gene-D1109_RS06715;Dbxref=Genbank:WP_237610930.1;Name=WP_237610930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599219.1;locus_tag=D1109_RS06715;product=hypothetical protein;protein_id=WP_237610930.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1399088 1399627 . + . ID=gene-D1109_RS06720;Name=D1109_RS06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06720;old_locus_tag=D1109_06735 NZ_CP031858.1 Protein Homology CDS 1399088 1399627 . + 0 ID=cds-WP_005619368.1;Parent=gene-D1109_RS06720;Dbxref=Genbank:WP_005619368.1;Name=WP_005619368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005619368.1;locus_tag=D1109_RS06720;product=hypothetical protein;protein_id=WP_005619368.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1399702 1400016 . + . ID=gene-D1109_RS06725;Name=D1109_RS06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06725;old_locus_tag=D1109_06740 NZ_CP031858.1 Protein Homology CDS 1399702 1400016 . + 0 ID=cds-WP_005602530.1;Parent=gene-D1109_RS06725;Dbxref=Genbank:WP_005602530.1;Name=WP_005602530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005602530.1;locus_tag=D1109_RS06725;product=hypothetical protein;protein_id=WP_005602530.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1400032 1400265 . + . ID=gene-D1109_RS06730;Name=D1109_RS06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06730;old_locus_tag=D1109_06745 NZ_CP031858.1 GeneMarkS-2+ CDS 1400032 1400265 . + 0 ID=cds-WP_009875187.1;Parent=gene-D1109_RS06730;Dbxref=Genbank:WP_009875187.1;Name=WP_009875187.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=D1109_RS06730;product=hypothetical protein;protein_id=WP_009875187.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1400434 1401222 . + . ID=gene-D1109_RS06735;Name=D1109_RS06735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06735;old_locus_tag=D1109_06750 NZ_CP031858.1 Protein Homology CDS 1400434 1401222 . + 0 ID=cds-WP_237610931.1;Parent=gene-D1109_RS06735;Dbxref=Genbank:WP_237610931.1;Name=WP_237610931.1;Ontology_term=GO:0006313;gbkey=CDS;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618583.1;locus_tag=D1109_RS06735;product=transposase;protein_id=WP_237610931.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1401303 1401875 . + . ID=gene-D1109_RS06740;Name=D1109_RS06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06740;old_locus_tag=D1109_06755 NZ_CP031858.1 GeneMarkS-2+ CDS 1401303 1401875 . + 0 ID=cds-WP_237610106.1;Parent=gene-D1109_RS06740;Dbxref=Genbank:WP_237610106.1;Name=WP_237610106.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=D1109_RS06740;product=hypothetical protein;protein_id=WP_237610106.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1402295 1406323 . + . ID=gene-D1109_RS06745;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=D1109_RS06745;old_locus_tag=D1109_06760 NZ_CP031858.1 Protein Homology CDS 1402295 1406323 . + 0 ID=cds-WP_005613296.1;Parent=gene-D1109_RS06745;Dbxref=Genbank:WP_005613296.1;Name=WP_005613296.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoB;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=transcription%2C DNA-templated|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006719669.1;locus_tag=D1109_RS06745;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_005613296.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1406449 1410720 . + . ID=gene-D1109_RS06750;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=D1109_RS06750;old_locus_tag=D1109_06765 NZ_CP031858.1 Protein Homology CDS 1406449 1410720 . + 0 ID=cds-WP_005613298.1;Parent=gene-D1109_RS06750;Dbxref=Genbank:WP_005613298.1;Name=WP_005613298.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoC;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=transcription%2C DNA-templated|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618195.1;locus_tag=D1109_RS06750;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_005613298.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1410873 1412423 . + . ID=gene-D1109_RS06755;Name=D1109_RS06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06755;old_locus_tag=D1109_06770 NZ_CP031858.1 Protein Homology CDS 1410873 1412423 . + 0 ID=cds-WP_005616128.1;Parent=gene-D1109_RS06755;Dbxref=Genbank:WP_005616128.1;Name=WP_005616128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005616128.1;locus_tag=D1109_RS06755;product=class I SAM-dependent methyltransferase;protein_id=WP_005616128.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1412420 1413202 . + . ID=gene-D1109_RS06760;Name=D1109_RS06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06760;old_locus_tag=D1109_06775 NZ_CP031858.1 Protein Homology CDS 1412420 1413202 . + 0 ID=cds-WP_237610932.1;Parent=gene-D1109_RS06760;Dbxref=Genbank:WP_237610932.1;Name=WP_237610932.1;Ontology_term=GO:0009307;gbkey=CDS;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005602534.1;locus_tag=D1109_RS06760;product=HincII family type II restriction endonuclease;protein_id=WP_237610932.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1413565 1413795 . + . ID=gene-D1109_RS06765;Name=D1109_RS06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06765;old_locus_tag=D1109_06780 NZ_CP031858.1 Protein Homology CDS 1413565 1413795 . + 0 ID=cds-WP_005613300.1;Parent=gene-D1109_RS06765;Dbxref=Genbank:WP_005613300.1;Name=WP_005613300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005616131.1;locus_tag=D1109_RS06765;product=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;protein_id=WP_005613300.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1413795 1414193 . + . ID=gene-D1109_RS06770;Name=vapC;gbkey=Gene;gene=vapC;gene_biotype=protein_coding;locus_tag=D1109_RS06770;old_locus_tag=D1109_06785 NZ_CP031858.1 Protein Homology CDS 1413795 1414193 . + 0 ID=cds-WP_237610933.1;Parent=gene-D1109_RS06770;Dbxref=Genbank:WP_237610933.1;Name=WP_237610933.1;Ontology_term=GO:0004540;gbkey=CDS;gene=vapC;go_function=ribonuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005651560.1;locus_tag=D1109_RS06770;product=tRNA(fMet)-specific endonuclease VapC;protein_id=WP_237610933.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1414282 1415615 . + . ID=gene-D1109_RS06775;Name=D1109_RS06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06775;old_locus_tag=D1109_06790 NZ_CP031858.1 Protein Homology CDS 1414282 1414735 . + 0 ID=cds-WP_237610934.1;Parent=gene-D1109_RS06775;Dbxref=Genbank:WP_237610934.1;Name=WP_237610934.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612109.1;locus_tag=D1109_RS06775;product=IS3 family transposase;protein_id=WP_237610934.1;transl_table=11 NZ_CP031858.1 Protein Homology CDS 1414735 1415615 . + 2 ID=cds-WP_237610934.1;Parent=gene-D1109_RS06775;Dbxref=Genbank:WP_237610934.1;Name=WP_237610934.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612109.1;locus_tag=D1109_RS06775;product=IS3 family transposase;protein_id=WP_237610934.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1415750 1416166 . - . ID=gene-D1109_RS06780;Name=D1109_RS06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06780;old_locus_tag=D1109_06795 NZ_CP031858.1 Protein Homology CDS 1415750 1416166 . - 0 ID=cds-WP_005599244.1;Parent=gene-D1109_RS06780;Dbxref=Genbank:WP_005599244.1;Name=WP_005599244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599244.1;locus_tag=D1109_RS06780;product=DUF417 family protein;protein_id=WP_005599244.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1416403 1417593 . - . ID=gene-D1109_RS06785;Name=D1109_RS06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06785;old_locus_tag=D1109_06800 NZ_CP031858.1 Protein Homology CDS 1416403 1417593 . - 0 ID=cds-WP_005599245.1;Parent=gene-D1109_RS06785;Dbxref=Genbank:WP_005599245.1;Name=WP_005599245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599245.1;locus_tag=D1109_RS06785;product=pentapeptide repeat-containing protein;protein_id=WP_005599245.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1417646 1418968 . - . ID=gene-D1109_RS06790;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=D1109_RS06790;old_locus_tag=D1109_06805 NZ_CP031858.1 Protein Homology CDS 1417646 1418968 . - 0 ID=cds-WP_237610935.1;Parent=gene-D1109_RS06790;Dbxref=Genbank:WP_237610935.1;Name=WP_237610935.1;Ontology_term=GO:0006508,GO:0004176,GO:0005524;gbkey=CDS;gene=hslU;go_function=ATP-dependent peptidase activity|0004176||IEA,ATP binding|0005524||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011609688.1;locus_tag=D1109_RS06790;product=HslU--HslV peptidase ATPase subunit;protein_id=WP_237610935.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1419023 1419544 . - . ID=gene-D1109_RS06795;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=D1109_RS06795;old_locus_tag=D1109_06810 NZ_CP031858.1 Protein Homology CDS 1419023 1419544 . - 0 ID=cds-WP_005618211.1;Parent=gene-D1109_RS06795;Dbxref=Genbank:WP_005618211.1;Name=WP_005618211.1;Ontology_term=GO:0051603,GO:0004298;gbkey=CDS;gene=hslV;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in cellular protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010945739.1;locus_tag=D1109_RS06795;product=ATP-dependent protease subunit HslV;protein_id=WP_005618211.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1419623 1420336 . - . ID=gene-D1109_RS06800;Name=sfsA;gbkey=Gene;gene=sfsA;gene_biotype=protein_coding;locus_tag=D1109_RS06800;old_locus_tag=D1109_06815 NZ_CP031858.1 Protein Homology CDS 1419623 1420336 . - 0 ID=cds-WP_005613307.1;Parent=gene-D1109_RS06800;Dbxref=Genbank:WP_005613307.1;Name=WP_005613307.1;Ontology_term=GO:0000023,GO:0003677;gbkey=CDS;gene=sfsA;go_function=DNA binding|0003677||IEA;go_process=maltose metabolic process|0000023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618213.1;locus_tag=D1109_RS06800;product=DNA/RNA nuclease SfsA;protein_id=WP_005613307.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1420594 1420986 . - . ID=gene-D1109_RS06805;Name=D1109_RS06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06805;old_locus_tag=D1109_06820 NZ_CP031858.1 Protein Homology CDS 1420594 1420986 . - 0 ID=cds-WP_005618217.1;Parent=gene-D1109_RS06805;Dbxref=Genbank:WP_005618217.1;Name=WP_005618217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599250.1;locus_tag=D1109_RS06805;product=VOC family protein;protein_id=WP_005618217.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1421085 1422230 . + . ID=gene-D1109_RS06810;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=D1109_RS06810;old_locus_tag=D1109_06825 NZ_CP031858.1 Protein Homology CDS 1421085 1422230 . + 0 ID=cds-WP_237610936.1;Parent=gene-D1109_RS06810;Dbxref=Genbank:WP_237610936.1;Name=WP_237610936.1;Ontology_term=GO:0006281,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005609167.1;locus_tag=D1109_RS06810;product=A/G-specific adenine glycosylase;protein_id=WP_237610936.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1422234 1422509 . + . ID=gene-D1109_RS06815;Name=D1109_RS06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06815;old_locus_tag=D1109_06830 NZ_CP031858.1 Protein Homology CDS 1422234 1422509 . + 0 ID=cds-WP_005599252.1;Parent=gene-D1109_RS06815;Dbxref=Genbank:WP_005599252.1;Name=WP_005599252.1;Ontology_term=GO:0005506;gbkey=CDS;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015674328.1;locus_tag=D1109_RS06815;product=oxidative damage protection protein;protein_id=WP_005599252.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1422527 1423624 . + . ID=gene-D1109_RS06820;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=D1109_RS06820;old_locus_tag=D1109_06835 NZ_CP031858.1 Protein Homology CDS 1422527 1423624 . + 0 ID=cds-WP_005599253.1;Parent=gene-D1109_RS06820;Dbxref=Genbank:WP_005599253.1;Name=WP_005599253.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltC;go_component=membrane|0016020||IEA;go_function=lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599253.1;locus_tag=D1109_RS06820;product=membrane-bound lytic murein transglycosylase MltC;protein_id=WP_005599253.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1423749 1423824 . + . ID=gene-D1109_RS06825;Name=D1109_RS06825;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS06825;old_locus_tag=D1109_06840 NZ_CP031858.1 tRNAscan-SE tRNA 1423749 1423824 . + . ID=rna-D1109_RS06825;Parent=gene-D1109_RS06825;anticodon=(pos:1423782..1423784);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS06825;product=tRNA-Phe NZ_CP031858.1 tRNAscan-SE exon 1423749 1423824 . + . ID=exon-D1109_RS06825-1;Parent=rna-D1109_RS06825;anticodon=(pos:1423782..1423784);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS06825;product=tRNA-Phe NZ_CP031858.1 RefSeq gene 1423830 1423905 . + . ID=gene-D1109_RS06830;Name=D1109_RS06830;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS06830;old_locus_tag=D1109_06845 NZ_CP031858.1 tRNAscan-SE tRNA 1423830 1423905 . + . ID=rna-D1109_RS06830;Parent=gene-D1109_RS06830;anticodon=(pos:1423863..1423865);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS06830;product=tRNA-Asn NZ_CP031858.1 tRNAscan-SE exon 1423830 1423905 . + . ID=exon-D1109_RS06830-1;Parent=rna-D1109_RS06830;anticodon=(pos:1423863..1423865);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS06830;product=tRNA-Asn NZ_CP031858.1 RefSeq gene 1424038 1424113 . + . ID=gene-D1109_RS06835;Name=D1109_RS06835;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS06835;old_locus_tag=D1109_06850 NZ_CP031858.1 tRNAscan-SE tRNA 1424038 1424113 . + . ID=rna-D1109_RS06835;Parent=gene-D1109_RS06835;anticodon=(pos:1424071..1424073);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS06835;product=tRNA-Phe NZ_CP031858.1 tRNAscan-SE exon 1424038 1424113 . + . ID=exon-D1109_RS06835-1;Parent=rna-D1109_RS06835;anticodon=(pos:1424071..1424073);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS06835;product=tRNA-Phe NZ_CP031858.1 RefSeq gene 1424119 1424194 . + . ID=gene-D1109_RS06840;Name=D1109_RS06840;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS06840;old_locus_tag=D1109_06855 NZ_CP031858.1 tRNAscan-SE tRNA 1424119 1424194 . + . ID=rna-D1109_RS06840;Parent=gene-D1109_RS06840;anticodon=(pos:1424152..1424154);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS06840;product=tRNA-Asn NZ_CP031858.1 tRNAscan-SE exon 1424119 1424194 . + . ID=exon-D1109_RS06840-1;Parent=rna-D1109_RS06840;anticodon=(pos:1424152..1424154);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS06840;product=tRNA-Asn NZ_CP031858.1 RefSeq gene 1424617 1426008 . + . ID=gene-D1109_RS06845;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=D1109_RS06845;old_locus_tag=D1109_06860 NZ_CP031858.1 Protein Homology CDS 1424617 1426008 . + 0 ID=cds-WP_237610937.1;Parent=gene-D1109_RS06845;Dbxref=Genbank:WP_237610937.1;Name=WP_237610937.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011199698.1;locus_tag=D1109_RS06845;product=signal recognition particle protein;protein_id=WP_237610937.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1426162 1427826 . - . ID=gene-D1109_RS06850;Name=D1109_RS06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06850;old_locus_tag=D1109_06865 NZ_CP031858.1 Protein Homology CDS 1426162 1427826 . - 0 ID=cds-WP_237610938.1;Parent=gene-D1109_RS06850;Dbxref=Genbank:WP_237610938.1;Name=WP_237610938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005602586.1;locus_tag=D1109_RS06850;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=WP_237610938.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1428018 1429184 . - . ID=gene-D1109_RS06855;Name=D1109_RS06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06855;old_locus_tag=D1109_06870 NZ_CP031858.1 Protein Homology CDS 1428018 1429184 . - 0 ID=cds-WP_009875397.1;Parent=gene-D1109_RS06855;Dbxref=Genbank:WP_009875397.1;Name=WP_009875397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652177.1;locus_tag=D1109_RS06855;product=FAD-dependent oxidoreductase;protein_id=WP_009875397.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1429218 1429526 . - . ID=gene-D1109_RS06860;Name=D1109_RS06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06860;old_locus_tag=D1109_06875 NZ_CP031858.1 Protein Homology CDS 1429218 1429526 . - 0 ID=cds-WP_005605785.1;Parent=gene-D1109_RS06860;Dbxref=Genbank:WP_005605785.1;Name=WP_005605785.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005605785.1;locus_tag=D1109_RS06860;product=putative addiction module antidote protein;protein_id=WP_005605785.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1429499 1429813 . - . ID=gene-D1109_RS06865;Name=D1109_RS06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06865;old_locus_tag=D1109_06880 NZ_CP031858.1 Protein Homology CDS 1429499 1429813 . - 0 ID=cds-WP_009875396.1;Parent=gene-D1109_RS06865;Dbxref=Genbank:WP_009875396.1;Name=WP_009875396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875396.1;locus_tag=D1109_RS06865;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_009875396.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1430000 1431526 . + . ID=gene-D1109_RS06870;Name=D1109_RS06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06870;old_locus_tag=D1109_06885 NZ_CP031858.1 Protein Homology CDS 1430000 1431526 . + 0 ID=cds-WP_009875395.1;Parent=gene-D1109_RS06870;Dbxref=Genbank:WP_009875395.1;Name=WP_009875395.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005613315.1;locus_tag=D1109_RS06870;product=YifB family Mg chelatase-like AAA ATPase;protein_id=WP_009875395.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1431651 1432754 . + . ID=gene-D1109_RS06875;Name=D1109_RS06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06875;old_locus_tag=D1109_06890 NZ_CP031858.1 Protein Homology CDS 1431651 1432754 . + 0 ID=cds-WP_009875394.1;Parent=gene-D1109_RS06875;Dbxref=Genbank:WP_009875394.1;Name=WP_009875394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875394.1;locus_tag=D1109_RS06875;product=membrane protein;protein_id=WP_009875394.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1432800 1433564 . - . ID=gene-D1109_RS06880;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=D1109_RS06880;old_locus_tag=D1109_06895 NZ_CP031858.1 Protein Homology CDS 1432800 1433564 . - 0 ID=cds-WP_005613317.1;Parent=gene-D1109_RS06880;Dbxref=Genbank:WP_005613317.1;Name=WP_005613317.1;Ontology_term=GO:0009234,GO:0070205;gbkey=CDS;gene=menH;go_function=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase activity|0070205||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599260.1;locus_tag=D1109_RS06880;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WP_005613317.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1433564 1435270 . - . ID=gene-D1109_RS06885;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=D1109_RS06885;old_locus_tag=D1109_06900 NZ_CP031858.1 Protein Homology CDS 1433564 1435270 . - 0 ID=cds-WP_009875393.1;Parent=gene-D1109_RS06885;Dbxref=Genbank:WP_009875393.1;Name=WP_009875393.1;Ontology_term=GO:0009234,GO:0070204;gbkey=CDS;gene=menD;go_function=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875393.1;locus_tag=D1109_RS06885;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=WP_009875393.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1435523 1436116 . + . ID=gene-D1109_RS06890;Name=D1109_RS06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06890;old_locus_tag=D1109_06905 NZ_CP031858.1 Protein Homology CDS 1435523 1436116 . + 0 ID=cds-WP_237610939.1;Parent=gene-D1109_RS06890;Dbxref=Genbank:WP_237610939.1;Name=WP_237610939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005609191.1;locus_tag=D1109_RS06890;product=GDSL-type esterase/lipase family protein;protein_id=WP_237610939.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1436154 1436843 . + . ID=gene-D1109_RS06895;Name=D1109_RS06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06895;old_locus_tag=D1109_06910 NZ_CP031858.1 Protein Homology CDS 1436154 1436843 . + 0 ID=cds-WP_005599263.1;Parent=gene-D1109_RS06895;Dbxref=Genbank:WP_005599263.1;Name=WP_005599263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005605797.1;locus_tag=D1109_RS06895;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_005599263.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1436853 1437725 . + . ID=gene-D1109_RS06900;Name=D1109_RS06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06900;old_locus_tag=D1109_06915 NZ_CP031858.1 Protein Homology CDS 1436853 1437725 . + 0 ID=cds-WP_009875392.1;Parent=gene-D1109_RS06900;Dbxref=Genbank:WP_009875392.1;Name=WP_009875392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015674265.1;locus_tag=D1109_RS06900;product=N-acetylmannosamine kinase;protein_id=WP_009875392.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1437746 1438624 . + . ID=gene-D1109_RS06905;Name=nanA;gbkey=Gene;gene=nanA;gene_biotype=protein_coding;locus_tag=D1109_RS06905;old_locus_tag=D1109_06920 NZ_CP031858.1 Protein Homology CDS 1437746 1438624 . + 0 ID=cds-WP_005599265.1;Parent=gene-D1109_RS06905;Dbxref=Genbank:WP_005599265.1;Name=WP_005599265.1;Ontology_term=GO:0006040,GO:0009273,GO:0008747;gbkey=CDS;gene=nanA;go_function=N-acetylneuraminate lyase activity|0008747||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan-based cell wall biogenesis|0009273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011608851.1;locus_tag=D1109_RS06905;product=N-acetylneuraminate lyase;protein_id=WP_005599265.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1438674 1439477 . + . ID=gene-D1109_RS06910;Name=D1109_RS06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06910;old_locus_tag=D1109_06925 NZ_CP031858.1 Protein Homology CDS 1438674 1439477 . + 0 ID=cds-WP_005599267.1;Parent=gene-D1109_RS06910;Dbxref=Genbank:WP_005599267.1;Name=WP_005599267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599267.1;locus_tag=D1109_RS06910;product=glucosamine-6-phosphate deaminase;protein_id=WP_005599267.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1439529 1440674 . + . ID=gene-D1109_RS06915;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=D1109_RS06915;old_locus_tag=D1109_06930 NZ_CP031858.1 Protein Homology CDS 1439529 1440674 . + 0 ID=cds-WP_005599269.1;Parent=gene-D1109_RS06915;Dbxref=Genbank:WP_005599269.1;Name=WP_005599269.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005621248.1;locus_tag=D1109_RS06915;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_005599269.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1440823 1442217 . - . ID=gene-D1109_RS06920;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=D1109_RS06920;old_locus_tag=D1109_06935 NZ_CP031858.1 Protein Homology CDS 1440823 1442217 . - 0 ID=cds-WP_005605803.1;Parent=gene-D1109_RS06920;Dbxref=Genbank:WP_005605803.1;Name=WP_005605803.1;Ontology_term=GO:0006099,GO:0004333;gbkey=CDS;gene=fumC;go_function=fumarate hydratase activity|0004333||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005567406.1;locus_tag=D1109_RS06920;product=class II fumarate hydratase;protein_id=WP_005605803.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1442372 1443028 . - . ID=gene-D1109_RS06925;Name=D1109_RS06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS06925;old_locus_tag=D1109_06940 NZ_CP031858.1 Protein Homology CDS 1442372 1443028 . - 0 ID=cds-WP_005609196.1;Parent=gene-D1109_RS06925;Dbxref=Genbank:WP_005609196.1;Name=WP_005609196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005609196.1;locus_tag=D1109_RS06925;product=TfoX/Sxy family DNA transformation protein;protein_id=WP_005609196.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1443436 1443747 . + . ID=gene-D1109_RS06930;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=D1109_RS06930;old_locus_tag=D1109_06945 NZ_CP031858.1 Protein Homology CDS 1443436 1443747 . + 0 ID=cds-WP_001181005.1;Parent=gene-D1109_RS06930;Dbxref=Genbank:WP_001181005.1;Name=WP_001181005.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1;locus_tag=D1109_RS06930;product=30S ribosomal protein S10;protein_id=WP_001181005.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1443773 1444399 . + . ID=gene-D1109_RS06935;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=D1109_RS06935;old_locus_tag=D1109_06950 NZ_CP031858.1 Protein Homology CDS 1443773 1444399 . + 0 ID=cds-WP_005599280.1;Parent=gene-D1109_RS06935;Dbxref=Genbank:WP_005599280.1;Name=WP_005599280.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1;locus_tag=D1109_RS06935;product=50S ribosomal protein L3;protein_id=WP_005599280.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1444415 1445017 . + . ID=gene-D1109_RS06940;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=D1109_RS06940;old_locus_tag=D1109_06955 NZ_CP031858.1 Protein Homology CDS 1444415 1445017 . + 0 ID=cds-WP_005599282.1;Parent=gene-D1109_RS06940;Dbxref=Genbank:WP_005599282.1;Name=WP_005599282.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1;locus_tag=D1109_RS06940;product=50S ribosomal protein L4;protein_id=WP_005599282.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1445014 1445319 . + . ID=gene-D1109_RS06945;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=D1109_RS06945;old_locus_tag=D1109_06960 NZ_CP031858.1 Protein Homology CDS 1445014 1445319 . + 0 ID=cds-WP_005599290.1;Parent=gene-D1109_RS06945;Dbxref=Genbank:WP_005599290.1;Name=WP_005599290.1;gbkey=CDS;gene=rplW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005818317.1;locus_tag=D1109_RS06945;product=50S ribosomal protein L23;protein_id=WP_005599290.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1445340 1446161 . + . ID=gene-D1109_RS06950;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=D1109_RS06950;old_locus_tag=D1109_06965 NZ_CP031858.1 Protein Homology CDS 1445340 1446161 . + 0 ID=cds-WP_005599291.1;Parent=gene-D1109_RS06950;Dbxref=Genbank:WP_005599291.1;Name=WP_005599291.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplB;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738551.1;locus_tag=D1109_RS06950;product=50S ribosomal protein L2;protein_id=WP_005599291.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1446189 1446464 . + . ID=gene-D1109_RS06955;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=D1109_RS06955;old_locus_tag=D1109_06970 NZ_CP031858.1 Protein Homology CDS 1446189 1446464 . + 0 ID=cds-WP_005539416.1;Parent=gene-D1109_RS06955;Dbxref=Genbank:WP_005539416.1;Name=WP_005539416.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsS;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_252949.1;locus_tag=D1109_RS06955;product=30S ribosomal protein S19;protein_id=WP_005539416.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1446475 1446807 . + . ID=gene-D1109_RS06960;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=D1109_RS06960;old_locus_tag=D1109_06975 NZ_CP031858.1 Protein Homology CDS 1446475 1446807 . + 0 ID=cds-WP_005599292.1;Parent=gene-D1109_RS06960;Dbxref=Genbank:WP_005599292.1;Name=WP_005599292.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplV;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447526.1;locus_tag=D1109_RS06960;product=50S ribosomal protein L22;protein_id=WP_005599292.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1446826 1447533 . + . ID=gene-D1109_RS06965;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=D1109_RS06965;old_locus_tag=D1109_06980 NZ_CP031858.1 Protein Homology CDS 1446826 1447533 . + 0 ID=cds-WP_005599293.1;Parent=gene-D1109_RS06965;Dbxref=Genbank:WP_005599293.1;Name=WP_005599293.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsC;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742302.1;locus_tag=D1109_RS06965;product=30S ribosomal protein S3;protein_id=WP_005599293.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1447547 1447957 . + . ID=gene-D1109_RS06970;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=D1109_RS06970;old_locus_tag=D1109_06985 NZ_CP031858.1 Protein Homology CDS 1447547 1447957 . + 0 ID=cds-WP_005599294.1;Parent=gene-D1109_RS06970;Dbxref=Genbank:WP_005599294.1;Name=WP_005599294.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplP;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1;locus_tag=D1109_RS06970;product=50S ribosomal protein L16;protein_id=WP_005599294.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1447957 1448148 . + . ID=gene-D1109_RS06975;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=D1109_RS06975;old_locus_tag=D1109_06990 NZ_CP031858.1 Protein Homology CDS 1447957 1448148 . + 0 ID=cds-WP_005599295.1;Parent=gene-D1109_RS06975;Dbxref=Genbank:WP_005599295.1;Name=WP_005599295.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmC;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599295.1;locus_tag=D1109_RS06975;product=50S ribosomal protein L29;protein_id=WP_005599295.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1448148 1448402 . + . ID=gene-D1109_RS06980;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=D1109_RS06980;old_locus_tag=D1109_06995 NZ_CP031858.1 Protein Homology CDS 1448148 1448402 . + 0 ID=cds-WP_005599296.1;Parent=gene-D1109_RS06980;Dbxref=Genbank:WP_005599296.1;Name=WP_005599296.1;Ontology_term=GO:0006412,GO:0003735,GO:0022627;gbkey=CDS;gene=rpsQ;go_component=cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005818325.1;locus_tag=D1109_RS06980;product=30S ribosomal protein S17;protein_id=WP_005599296.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1448642 1449013 . + . ID=gene-D1109_RS06985;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=D1109_RS06985;old_locus_tag=D1109_07000 NZ_CP031858.1 Protein Homology CDS 1448642 1449013 . + 0 ID=cds-WP_005619403.1;Parent=gene-D1109_RS06985;Dbxref=Genbank:WP_005619403.1;Name=WP_005619403.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplN;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012728338.1;locus_tag=D1109_RS06985;product=50S ribosomal protein L14;protein_id=WP_005619403.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1449024 1449335 . + . ID=gene-D1109_RS06990;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=D1109_RS06990;old_locus_tag=D1109_07005 NZ_CP031858.1 Protein Homology CDS 1449024 1449335 . + 0 ID=cds-WP_005599300.1;Parent=gene-D1109_RS06990;Dbxref=Genbank:WP_005599300.1;Name=WP_005599300.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplX;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014992365.1;locus_tag=D1109_RS06990;product=50S ribosomal protein L24;protein_id=WP_005599300.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1449353 1449892 . + . ID=gene-D1109_RS06995;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=D1109_RS06995;old_locus_tag=D1109_07010 NZ_CP031858.1 Protein Homology CDS 1449353 1449892 . + 0 ID=cds-WP_005619405.1;Parent=gene-D1109_RS06995;Dbxref=Genbank:WP_005619405.1;Name=WP_005619405.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1;locus_tag=D1109_RS06995;product=50S ribosomal protein L5;protein_id=WP_005619405.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1449904 1450209 . + . ID=gene-D1109_RS07000;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=D1109_RS07000;old_locus_tag=D1109_07015 NZ_CP031858.1 Protein Homology CDS 1449904 1450209 . + 0 ID=cds-WP_005602614.1;Parent=gene-D1109_RS07000;Dbxref=Genbank:WP_005602614.1;Name=WP_005602614.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599304.1;locus_tag=D1109_RS07000;product=30S ribosomal protein S14;protein_id=WP_005602614.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1450246 1450638 . + . ID=gene-D1109_RS07005;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=D1109_RS07005;old_locus_tag=D1109_07020 NZ_CP031858.1 Protein Homology CDS 1450246 1450638 . + 0 ID=cds-WP_005619408.1;Parent=gene-D1109_RS07005;Dbxref=Genbank:WP_005619408.1;Name=WP_005619408.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148781.1;locus_tag=D1109_RS07005;product=30S ribosomal protein S8;protein_id=WP_005619408.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1450655 1451188 . + . ID=gene-D1109_RS07010;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=D1109_RS07010;old_locus_tag=D1109_07025 NZ_CP031858.1 Protein Homology CDS 1450655 1451188 . + 0 ID=cds-WP_005599308.1;Parent=gene-D1109_RS07010;Dbxref=Genbank:WP_005599308.1;Name=WP_005599308.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0022625;gbkey=CDS;gene=rplF;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1;locus_tag=D1109_RS07010;product=50S ribosomal protein L6;protein_id=WP_005599308.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1451203 1451556 . + . ID=gene-D1109_RS07015;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=D1109_RS07015;old_locus_tag=D1109_07030 NZ_CP031858.1 Protein Homology CDS 1451203 1451556 . + 0 ID=cds-WP_005599310.1;Parent=gene-D1109_RS07015;Dbxref=Genbank:WP_005599310.1;Name=WP_005599310.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplR;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1;locus_tag=D1109_RS07015;product=50S ribosomal protein L18;protein_id=WP_005599310.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1451571 1452071 . + . ID=gene-D1109_RS07020;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=D1109_RS07020;old_locus_tag=D1109_07035 NZ_CP031858.1 Protein Homology CDS 1451571 1452071 . + 0 ID=cds-WP_005599314.1;Parent=gene-D1109_RS07020;Dbxref=Genbank:WP_005599314.1;Name=WP_005599314.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsE;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018356922.1;locus_tag=D1109_RS07020;product=30S ribosomal protein S5;protein_id=WP_005599314.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1452078 1452257 . + . ID=gene-D1109_RS07025;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=D1109_RS07025;old_locus_tag=D1109_07040 NZ_CP031858.1 Protein Homology CDS 1452078 1452257 . + 0 ID=cds-WP_005599315.1;Parent=gene-D1109_RS07025;Dbxref=Genbank:WP_005599315.1;Name=WP_005599315.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmD;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147215.1;locus_tag=D1109_RS07025;product=50S ribosomal protein L30;protein_id=WP_005599315.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1452262 1452696 . + . ID=gene-D1109_RS07030;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=D1109_RS07030;old_locus_tag=D1109_07045 NZ_CP031858.1 Protein Homology CDS 1452262 1452696 . + 0 ID=cds-WP_005602615.1;Parent=gene-D1109_RS07030;Dbxref=Genbank:WP_005602615.1;Name=WP_005602615.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplO;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095501.1;locus_tag=D1109_RS07030;product=50S ribosomal protein L15;protein_id=WP_005602615.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1452700 1454022 . + . ID=gene-D1109_RS07035;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=D1109_RS07035;old_locus_tag=D1109_07050 NZ_CP031858.1 Protein Homology CDS 1452700 1454022 . + 0 ID=cds-WP_005602618.1;Parent=gene-D1109_RS07035;Dbxref=Genbank:WP_005602618.1;Name=WP_005602618.1;Ontology_term=GO:0043952,GO:0015450,GO:0005887;gbkey=CDS;gene=secY;go_component=integral component of plasma membrane|0005887||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017805525.1;locus_tag=D1109_RS07035;product=preprotein translocase subunit SecY;protein_id=WP_005602618.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1454048 1454161 . + . ID=gene-D1109_RS07040;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=D1109_RS07040;old_locus_tag=D1109_07055 NZ_CP031858.1 Protein Homology CDS 1454048 1454161 . + 0 ID=cds-WP_005599318.1;Parent=gene-D1109_RS07040;Dbxref=Genbank:WP_005599318.1;Name=WP_005599318.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006232360.1;locus_tag=D1109_RS07040;product=50S ribosomal protein L36;protein_id=WP_005599318.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1454298 1454654 . + . ID=gene-D1109_RS07045;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=D1109_RS07045;old_locus_tag=D1109_07060 NZ_CP031858.1 Protein Homology CDS 1454298 1454654 . + 0 ID=cds-WP_005599322.1;Parent=gene-D1109_RS07045;Dbxref=Genbank:WP_005599322.1;Name=WP_005599322.1;Ontology_term=GO:0006412,GO:0003735,GO:0022627;gbkey=CDS;gene=rpsM;go_component=cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019935869.1;locus_tag=D1109_RS07045;product=30S ribosomal protein S13;protein_id=WP_005599322.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1454671 1455060 . + . ID=gene-D1109_RS07050;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=D1109_RS07050;old_locus_tag=D1109_07065 NZ_CP031858.1 Protein Homology CDS 1454671 1455060 . + 0 ID=cds-WP_005599323.1;Parent=gene-D1109_RS07050;Dbxref=Genbank:WP_005599323.1;Name=WP_005599323.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1;locus_tag=D1109_RS07050;product=30S ribosomal protein S11;protein_id=WP_005599323.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1455089 1455715 . + . ID=gene-D1109_RS07055;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=D1109_RS07055;old_locus_tag=D1109_07070 NZ_CP031858.1 Protein Homology CDS 1455089 1455715 . + 0 ID=cds-WP_005599325.1;Parent=gene-D1109_RS07055;Dbxref=Genbank:WP_005599325.1;Name=WP_005599325.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1;locus_tag=D1109_RS07055;product=30S ribosomal protein S4;protein_id=WP_005599325.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1455781 1456770 . + . ID=gene-D1109_RS07060;Name=rpoA;gbkey=Gene;gene=rpoA;gene_biotype=protein_coding;locus_tag=D1109_RS07060;old_locus_tag=D1109_07075 NZ_CP031858.1 Protein Homology CDS 1455781 1456770 . + 0 ID=cds-WP_005619415.1;Parent=gene-D1109_RS07060;Dbxref=Genbank:WP_005619415.1;Name=WP_005619415.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899,GO:0046983;gbkey=CDS;gene=rpoA;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA,protein dimerization activity|0046983||IEA;go_process=transcription%2C DNA-templated|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970247.1;locus_tag=D1109_RS07060;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_005619415.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1456806 1457189 . + . ID=gene-D1109_RS07065;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=D1109_RS07065;old_locus_tag=D1109_07080 NZ_CP031858.1 Protein Homology CDS 1456806 1457189 . + 0 ID=cds-WP_005599330.1;Parent=gene-D1109_RS07065;Dbxref=Genbank:WP_005599330.1;Name=WP_005599330.1;Ontology_term=GO:0006412,GO:0003735,GO:0005762,GO:0022625;gbkey=CDS;gene=rplQ;go_component=mitochondrial large ribosomal subunit|0005762||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014992360.1;locus_tag=D1109_RS07065;product=50S ribosomal protein L17;protein_id=WP_005599330.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1457426 1457674 . + . ID=gene-D1109_RS07070;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=D1109_RS07070;old_locus_tag=D1109_07085 NZ_CP031858.1 Protein Homology CDS 1457426 1457674 . + 0 ID=cds-WP_005599334.1;Parent=gene-D1109_RS07070;Dbxref=Genbank:WP_005599334.1;Name=WP_005599334.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010945696.1;locus_tag=D1109_RS07070;product=30S ribosomal protein S16;protein_id=WP_005599334.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1457708 1458235 . + . ID=gene-D1109_RS07075;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=D1109_RS07075;old_locus_tag=D1109_07090 NZ_CP031858.1 Protein Homology CDS 1457708 1458235 . + 0 ID=cds-WP_005599336.1;Parent=gene-D1109_RS07075;Dbxref=Genbank:WP_005599336.1;Name=WP_005599336.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364;gbkey=CDS;gene=rimM;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005625132.1;locus_tag=D1109_RS07075;product=ribosome maturation factor RimM;protein_id=WP_005599336.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1458293 1459048 . + . ID=gene-D1109_RS07080;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=D1109_RS07080;old_locus_tag=D1109_07095 NZ_CP031858.1 Protein Homology CDS 1458293 1459048 . + 0 ID=cds-WP_005599344.1;Parent=gene-D1109_RS07080;Dbxref=Genbank:WP_005599344.1;Name=WP_005599344.1;Ontology_term=GO:0006400,GO:0009019;gbkey=CDS;gene=trmD;go_function=tRNA (guanine-N1-)-methyltransferase activity|0009019||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652725.1;locus_tag=D1109_RS07080;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_005599344.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1459074 1459424 . + . ID=gene-D1109_RS07085;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=D1109_RS07085;old_locus_tag=D1109_07100 NZ_CP031858.1 Protein Homology CDS 1459074 1459424 . + 0 ID=cds-WP_005599346.1;Parent=gene-D1109_RS07085;Dbxref=Genbank:WP_005599346.1;Name=WP_005599346.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018356448.1;locus_tag=D1109_RS07085;product=50S ribosomal protein L19;protein_id=WP_005599346.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1459594 1460787 . - . ID=gene-D1109_RS07090;Name=D1109_RS07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07090;old_locus_tag=D1109_07105 NZ_CP031858.1 Protein Homology CDS 1459594 1460787 . - 0 ID=cds-WP_009875146.1;Parent=gene-D1109_RS07090;Dbxref=Genbank:WP_009875146.1;Name=WP_009875146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875146.1;locus_tag=D1109_RS07090;product=cupin domain-containing protein;protein_id=WP_009875146.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1461003 1462118 . + . ID=gene-D1109_RS07095;Name=D1109_RS07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07095;old_locus_tag=D1109_07110 NZ_CP031858.1 Protein Homology CDS 1461003 1462118 . + 0 ID=cds-WP_005599350.1;Parent=gene-D1109_RS07095;Dbxref=Genbank:WP_005599350.1;Name=WP_005599350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618258.1;locus_tag=D1109_RS07095;product=ABC transporter substrate-binding protein;protein_id=WP_005599350.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1462121 1463158 . + . ID=gene-D1109_RS07100;Name=D1109_RS07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07100;old_locus_tag=D1109_07115 NZ_CP031858.1 Protein Homology CDS 1462121 1463158 . + 0 ID=cds-WP_005602625.1;Parent=gene-D1109_RS07100;Dbxref=Genbank:WP_005602625.1;Name=WP_005602625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263389.1;locus_tag=D1109_RS07100;product=iron ABC transporter permease;protein_id=WP_005602625.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1463174 1463941 . + . ID=gene-D1109_RS07105;Name=D1109_RS07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07105;old_locus_tag=D1109_07120 NZ_CP031858.1 Protein Homology CDS 1463174 1463941 . + 0 ID=cds-WP_039709400.1;Parent=gene-D1109_RS07105;Dbxref=Genbank:WP_039709400.1;Name=WP_039709400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618262.1;locus_tag=D1109_RS07105;product=ABC transporter ATP-binding protein;protein_id=WP_039709400.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1463951 1464382 . + . ID=gene-D1109_RS07110;Name=D1109_RS07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07110;old_locus_tag=D1109_07125 NZ_CP031858.1 Protein Homology CDS 1463951 1464382 . + 0 ID=cds-WP_005602629.1;Parent=gene-D1109_RS07110;Dbxref=Genbank:WP_005602629.1;Name=WP_005602629.1;Ontology_term=GO:0005507,GO:0009055;gbkey=CDS;go_function=copper ion binding|0005507||IEA,electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599355.1;locus_tag=D1109_RS07110;product=pseudoazurin;protein_id=WP_005602629.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1464391 1465497 . + . ID=gene-D1109_RS07115;Name=D1109_RS07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07115;old_locus_tag=D1109_07130 NZ_CP031858.1 Protein Homology CDS 1464391 1465497 . + 0 ID=cds-WP_237610940.1;Parent=gene-D1109_RS07115;Dbxref=Genbank:WP_237610940.1;Name=WP_237610940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005620192.1;locus_tag=D1109_RS07115;product=ABC transporter substrate-binding protein;protein_id=WP_237610940.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1465553 1466404 . + . ID=gene-D1109_RS07120;Name=D1109_RS07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07120;old_locus_tag=D1109_07135 NZ_CP031858.1 Protein Homology CDS 1465553 1466404 . + 0 ID=cds-WP_237610941.1;Parent=gene-D1109_RS07120;Dbxref=Genbank:WP_237610941.1;Name=WP_237610941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618269.1;locus_tag=D1109_RS07120;product=glutathione synthetase;protein_id=WP_237610941.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1466447 1467046 . - . ID=gene-D1109_RS07125;Name=torD;gbkey=Gene;gene=torD;gene_biotype=protein_coding;locus_tag=D1109_RS07125;old_locus_tag=D1109_07140 NZ_CP031858.1 Protein Homology CDS 1466447 1467046 . - 0 ID=cds-WP_237610942.1;Parent=gene-D1109_RS07125;Dbxref=Genbank:WP_237610942.1;Name=WP_237610942.1;Ontology_term=GO:0051259;gbkey=CDS;gene=torD;go_process=protein complex oligomerization|0051259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875139.1;locus_tag=D1109_RS07125;product=molecular chaperone TorD;protein_id=WP_237610942.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1467046 1469529 . - . ID=gene-D1109_RS07130;Name=torA;gbkey=Gene;gene=torA;gene_biotype=protein_coding;locus_tag=D1109_RS07130;old_locus_tag=D1109_07145 NZ_CP031858.1 Protein Homology CDS 1467046 1469529 . - 0 ID=cds-WP_237610943.1;Parent=gene-D1109_RS07130;Dbxref=Genbank:WP_237610943.1;Name=WP_237610943.1;Ontology_term=GO:0009061,GO:0009055,GO:0030151,GO:0050626,GO:0009322;gbkey=CDS;gene=torA;go_component=trimethylamine-N-oxide reductase complex|0009322||IEA;go_function=electron transfer activity|0009055||IEA,molybdenum ion binding|0030151||IEA,trimethylamine-N-oxide reductase (cytochrome c) activity|0050626||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014992348.1;locus_tag=D1109_RS07130;product=trimethylamine-N-oxide reductase TorA;protein_id=WP_237610943.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1469539 1470159 . - . ID=gene-D1109_RS07135;Name=D1109_RS07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07135;old_locus_tag=D1109_07150 NZ_CP031858.1 Protein Homology CDS 1469539 1470159 . - 0 ID=cds-WP_009875137.1;Parent=gene-D1109_RS07135;Dbxref=Genbank:WP_009875137.1;Name=WP_009875137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263393.1;locus_tag=D1109_RS07135;product=hypothetical protein;protein_id=WP_009875137.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1470350 1471255 . + . ID=gene-D1109_RS07140;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=D1109_RS07140;old_locus_tag=D1109_07155 NZ_CP031858.1 Protein Homology CDS 1470350 1471255 . + 0 ID=cds-WP_005616172.1;Parent=gene-D1109_RS07140;Dbxref=Genbank:WP_005616172.1;Name=WP_005616172.1;Ontology_term=GO:0006426,GO:0004820,GO:0009345;gbkey=CDS;gene=glyQ;go_component=glycine-tRNA ligase complex|0009345||IEA;go_function=glycine-tRNA ligase activity|0004820||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005616172.1;locus_tag=D1109_RS07140;product=glycine--tRNA ligase subunit alpha;protein_id=WP_005616172.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1471314 1471685 . + . ID=gene-D1109_RS07145;Name=D1109_RS07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07145;old_locus_tag=D1109_07160 NZ_CP031858.1 Protein Homology CDS 1471314 1471685 . + 0 ID=cds-WP_042655141.1;Parent=gene-D1109_RS07145;Dbxref=Genbank:WP_042655141.1;Name=WP_042655141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005609232.1;locus_tag=D1109_RS07145;product=endonuclease domain-containing protein;protein_id=WP_042655141.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1472158 1472562 . + . ID=gene-D1109_RS07150;Name=D1109_RS07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07150;old_locus_tag=D1109_07165 NZ_CP031858.1 Protein Homology CDS 1472158 1472562 . + 0 ID=cds-WP_005599368.1;Parent=gene-D1109_RS07150;Dbxref=Genbank:WP_005599368.1;Name=WP_005599368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599368.1;locus_tag=D1109_RS07150;product=hypothetical protein;protein_id=WP_005599368.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1472600 1474669 . + . ID=gene-D1109_RS07155;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=D1109_RS07155;old_locus_tag=D1109_07170 NZ_CP031858.1 Protein Homology CDS 1472600 1474669 . + 0 ID=cds-WP_237610944.1;Parent=gene-D1109_RS07155;Dbxref=Genbank:WP_237610944.1;Name=WP_237610944.1;Ontology_term=GO:0006426,GO:0004820,GO:0009345;gbkey=CDS;gene=glyS;go_component=glycine-tRNA ligase complex|0009345||IEA;go_function=glycine-tRNA ligase activity|0004820||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005693270.1;locus_tag=D1109_RS07155;product=glycine--tRNA ligase subunit beta;protein_id=WP_237610944.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1474785 1475075 . + . ID=gene-D1109_RS07160;Name=D1109_RS07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07160;old_locus_tag=D1109_07175 NZ_CP031858.1 Protein Homology CDS 1474785 1475075 . + 0 ID=cds-WP_005599371.1;Parent=gene-D1109_RS07160;Dbxref=Genbank:WP_005599371.1;Name=WP_005599371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599371.1;locus_tag=D1109_RS07160;product=DUF5377 family protein;protein_id=WP_005599371.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1475166 1476086 . + . ID=gene-D1109_RS07165;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=D1109_RS07165;old_locus_tag=D1109_07180 NZ_CP031858.1 Protein Homology CDS 1475166 1476086 . + 0 ID=cds-WP_005619426.1;Parent=gene-D1109_RS07165;Dbxref=Genbank:WP_005619426.1;Name=WP_005619426.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerC;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005619426.1;locus_tag=D1109_RS07165;product=tyrosine recombinase XerC;protein_id=WP_005619426.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1476090 1476479 . - . ID=gene-D1109_RS07170;Name=D1109_RS07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07170;old_locus_tag=D1109_07185 NZ_CP031858.1 Protein Homology CDS 1476090 1476479 . - 0 ID=cds-WP_005599373.1;Parent=gene-D1109_RS07170;Dbxref=Genbank:WP_005599373.1;Name=WP_005599373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005602656.1;locus_tag=D1109_RS07170;product=YbaN family protein;protein_id=WP_005599373.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1476543 1477334 . - . ID=gene-D1109_RS07175;Name=D1109_RS07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07175;old_locus_tag=D1109_07190 NZ_CP031858.1 Protein Homology CDS 1476543 1477334 . - 0 ID=cds-WP_237610945.1;Parent=gene-D1109_RS07175;Dbxref=Genbank:WP_237610945.1;Name=WP_237610945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618283.1;locus_tag=D1109_RS07175;product=glycosyltransferase family 2 protein;protein_id=WP_237610945.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1477331 1478062 . - . ID=gene-D1109_RS07180;Name=lpxH;gbkey=Gene;gene=lpxH;gene_biotype=protein_coding;locus_tag=D1109_RS07180;old_locus_tag=D1109_07195 NZ_CP031858.1 Protein Homology CDS 1477331 1478062 . - 0 ID=cds-WP_237610946.1;Parent=gene-D1109_RS07180;Dbxref=Genbank:WP_237610946.1;Name=WP_237610946.1;Ontology_term=GO:0009245,GO:0008758;gbkey=CDS;gene=lpxH;go_function=UDP-2%2C3-diacylglucosamine hydrolase activity|0008758||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599379.1;locus_tag=D1109_RS07180;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WP_237610946.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1478095 1478619 . - . ID=gene-D1109_RS07185;Name=D1109_RS07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07185;old_locus_tag=D1109_07200 NZ_CP031858.1 Protein Homology CDS 1478095 1478619 . - 0 ID=cds-WP_005599386.1;Parent=gene-D1109_RS07185;Dbxref=Genbank:WP_005599386.1;Name=WP_005599386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652847.1;locus_tag=D1109_RS07185;product=DUF1523 family protein;protein_id=WP_005599386.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1478654 1479442 . - . ID=gene-D1109_RS07190;Name=D1109_RS07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07190;old_locus_tag=D1109_07205 NZ_CP031858.1 Protein Homology CDS 1478654 1479442 . - 0 ID=cds-WP_005609241.1;Parent=gene-D1109_RS07190;Dbxref=Genbank:WP_005609241.1;Name=WP_005609241.1;Ontology_term=GO:0008152;gbkey=CDS;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014992335.1;locus_tag=D1109_RS07190;product=YchF/TatD family DNA exonuclease;protein_id=WP_005609241.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1480451 1481083 . + . ID=gene-D1109_RS07195;Name=D1109_RS07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07195;old_locus_tag=D1109_07215 NZ_CP031858.1 Protein Homology CDS 1480451 1481083 . + 0 ID=cds-WP_005620018.1;Parent=gene-D1109_RS07195;Dbxref=Genbank:WP_005620018.1;Name=WP_005620018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618679.1;locus_tag=D1109_RS07195;product=hypothetical protein;protein_id=WP_005620018.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1481189 1483129 . - . ID=gene-D1109_RS07200;Name=D1109_RS07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07200;old_locus_tag=D1109_07220 NZ_CP031858.1 Protein Homology CDS 1481189 1483129 . - 0 ID=cds-WP_005599391.1;Parent=gene-D1109_RS07200;Dbxref=Genbank:WP_005599391.1;Name=WP_005599391.1;Ontology_term=GO:0005524,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599391.1;locus_tag=D1109_RS07200;product=MacB family efflux pump subunit;protein_id=WP_005599391.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1483129 1484292 . - . ID=gene-D1109_RS07205;Name=D1109_RS07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07205;old_locus_tag=D1109_07225 NZ_CP031858.1 Protein Homology CDS 1483129 1484292 . - 0 ID=cds-WP_005599392.1;Parent=gene-D1109_RS07205;Dbxref=Genbank:WP_005599392.1;Name=WP_005599392.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599392.1;locus_tag=D1109_RS07205;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_005599392.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1484425 1485201 . - . ID=gene-D1109_RS07210;Name=D1109_RS07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07210;old_locus_tag=D1109_07230 NZ_CP031858.1 Protein Homology CDS 1484425 1485201 . - 0 ID=cds-WP_237610947.1;Parent=gene-D1109_RS07210;Dbxref=Genbank:WP_237610947.1;Name=WP_237610947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599394.1;locus_tag=D1109_RS07210;product=MipA/OmpV family protein;protein_id=WP_237610947.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1485532 1486515 . - . ID=gene-D1109_RS07215;Name=D1109_RS07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07215;old_locus_tag=D1109_07235 NZ_CP031858.1 Protein Homology CDS 1485532 1486515 . - 0 ID=cds-WP_012263399.1;Parent=gene-D1109_RS07215;Dbxref=Genbank:WP_012263399.1;Name=WP_012263399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014992334.1;locus_tag=D1109_RS07215;product=DNA polymerase III subunit delta';protein_id=WP_012263399.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1486518 1487144 . - . ID=gene-D1109_RS07220;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=D1109_RS07220;old_locus_tag=D1109_07240 NZ_CP031858.1 Protein Homology CDS 1486518 1487144 . - 0 ID=cds-WP_005599398.1;Parent=gene-D1109_RS07220;Dbxref=Genbank:WP_005599398.1;Name=WP_005599398.1;Ontology_term=GO:0015949,GO:0004798;gbkey=CDS;gene=tmk;go_function=thymidylate kinase activity|0004798||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652841.1;locus_tag=D1109_RS07220;product=dTMP kinase;protein_id=WP_005599398.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1487148 1488182 . - . ID=gene-D1109_RS07225;Name=mltG;gbkey=Gene;gene=mltG;gene_biotype=protein_coding;locus_tag=D1109_RS07225;old_locus_tag=D1109_07245 NZ_CP031858.1 Protein Homology CDS 1487148 1488182 . - 0 ID=cds-WP_237610948.1;Parent=gene-D1109_RS07225;Dbxref=Genbank:WP_237610948.1;Name=WP_237610948.1;Ontology_term=GO:0009252,GO:0071555,GO:0008932;gbkey=CDS;gene=mltG;go_function=lytic endotransglycosylase activity|0008932||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005613374.1;locus_tag=D1109_RS07225;product=endolytic transglycosylase MltG;protein_id=WP_237610948.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1488302 1488377 . - . ID=gene-D1109_RS07230;Name=D1109_RS07230;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS07230;old_locus_tag=D1109_07250 NZ_CP031858.1 tRNAscan-SE tRNA 1488302 1488377 . - . ID=rna-D1109_RS07230;Parent=gene-D1109_RS07230;anticodon=(pos:complement(1488342..1488344));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS07230;product=tRNA-Lys NZ_CP031858.1 tRNAscan-SE exon 1488302 1488377 . - . ID=exon-D1109_RS07230-1;Parent=rna-D1109_RS07230;anticodon=(pos:complement(1488342..1488344));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS07230;product=tRNA-Lys NZ_CP031858.1 RefSeq gene 1488412 1488487 . - . ID=gene-D1109_RS07235;Name=D1109_RS07235;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS07235;old_locus_tag=D1109_07255 NZ_CP031858.1 tRNAscan-SE tRNA 1488412 1488487 . - . ID=rna-D1109_RS07235;Parent=gene-D1109_RS07235;anticodon=(pos:complement(1488452..1488454));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS07235;product=tRNA-Lys NZ_CP031858.1 tRNAscan-SE exon 1488412 1488487 . - . ID=exon-D1109_RS07235-1;Parent=rna-D1109_RS07235;anticodon=(pos:complement(1488452..1488454));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS07235;product=tRNA-Lys NZ_CP031858.1 RefSeq gene 1488511 1488586 . - . ID=gene-D1109_RS07240;Name=D1109_RS07240;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS07240;old_locus_tag=D1109_07260 NZ_CP031858.1 tRNAscan-SE tRNA 1488511 1488586 . - . ID=rna-D1109_RS07240;Parent=gene-D1109_RS07240;anticodon=(pos:complement(1488551..1488553));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS07240;product=tRNA-Lys NZ_CP031858.1 tRNAscan-SE exon 1488511 1488586 . - . ID=exon-D1109_RS07240-1;Parent=rna-D1109_RS07240;anticodon=(pos:complement(1488551..1488553));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS07240;product=tRNA-Lys NZ_CP031858.1 RefSeq gene 1488781 1489014 . - . ID=gene-D1109_RS07245;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=D1109_RS07245;old_locus_tag=D1109_07265 NZ_CP031858.1 Protein Homology CDS 1488781 1489014 . - 0 ID=cds-WP_005599419.1;Parent=gene-D1109_RS07245;Dbxref=Genbank:WP_005599419.1;Name=WP_005599419.1;Ontology_term=GO:0006633;gbkey=CDS;gene=acpP;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010945679.1;locus_tag=D1109_RS07245;product=acyl carrier protein;protein_id=WP_005599419.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1489278 1489952 . - . ID=gene-D1109_RS07250;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=D1109_RS07250;old_locus_tag=D1109_07270 NZ_CP031858.1 Protein Homology CDS 1489278 1489952 . - 0 ID=cds-WP_005599420.1;Parent=gene-D1109_RS07250;Dbxref=Genbank:WP_005599420.1;Name=WP_005599420.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005613376.1;locus_tag=D1109_RS07250;product=ribulose-phosphate 3-epimerase;protein_id=WP_005599420.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1490174 1490443 . + . ID=gene-D1109_RS07255;Name=D1109_RS07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07255;old_locus_tag=D1109_07275 NZ_CP031858.1 Protein Homology CDS 1490174 1490443 . + 0 ID=cds-WP_005599422.1;Parent=gene-D1109_RS07255;Dbxref=Genbank:WP_005599422.1;Name=WP_005599422.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014992331.1;locus_tag=D1109_RS07255;product=type B 50S ribosomal protein L31;protein_id=WP_005599422.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1490457 1490582 . + . ID=gene-D1109_RS07260;Name=ykgO;gbkey=Gene;gene=ykgO;gene_biotype=protein_coding;locus_tag=D1109_RS07260;old_locus_tag=D1109_07280 NZ_CP031858.1 Protein Homology CDS 1490457 1490582 . + 0 ID=cds-WP_005599425.1;Parent=gene-D1109_RS07260;Dbxref=Genbank:WP_005599425.1;Name=WP_005599425.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=ykgO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005300174.1;locus_tag=D1109_RS07260;product=type B 50S ribosomal protein L36;protein_id=WP_005599425.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1490687 1493089 . - . ID=gene-D1109_RS07265;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;locus_tag=D1109_RS07265;old_locus_tag=D1109_07285 NZ_CP031858.1 Protein Homology CDS 1490687 1493089 . - 0 ID=cds-WP_237610949.1;Parent=gene-D1109_RS07265;Dbxref=Genbank:WP_237610949.1;Name=WP_237610949.1;Ontology_term=GO:0009252,GO:0046677,GO:0008233,GO:0008658,GO:0008955,GO:0009274;gbkey=CDS;gene=mrcB;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=peptidase activity|0008233||IEA,penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875322.1;locus_tag=D1109_RS07265;product=penicillin-binding protein 1B;protein_id=WP_237610949.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1493168 1494025 . - . ID=gene-D1109_RS07270;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=D1109_RS07270;old_locus_tag=D1109_07290 NZ_CP031858.1 Protein Homology CDS 1493168 1494025 . - 0 ID=cds-WP_005599432.1;Parent=gene-D1109_RS07270;Dbxref=Genbank:WP_005599432.1;Name=WP_005599432.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005723289.1;locus_tag=D1109_RS07270;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WP_005599432.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1494160 1495866 . - . ID=gene-D1109_RS07275;Name=D1109_RS07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07275;old_locus_tag=D1109_07295 NZ_CP031858.1 Protein Homology CDS 1494160 1495866 . - 0 ID=cds-WP_237610950.1;Parent=gene-D1109_RS07275;Dbxref=Genbank:WP_237610950.1;Name=WP_237610950.1;Ontology_term=GO:0015968,GO:0015969,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=stringent response|0015968||IEA,guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599433.1;locus_tag=D1109_RS07275;product=RelA/SpoT family protein;protein_id=WP_237610950.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1495962 1496243 . - . ID=gene-D1109_RS07280;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=D1109_RS07280;old_locus_tag=D1109_07300 NZ_CP031858.1 Protein Homology CDS 1495962 1496243 . - 0 ID=cds-WP_012263402.1;Parent=gene-D1109_RS07280;Dbxref=Genbank:WP_012263402.1;Name=WP_012263402.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoZ;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=transcription%2C DNA-templated|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005613378.1;locus_tag=D1109_RS07280;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_012263402.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1496370 1498451 . - . ID=gene-D1109_RS07285;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=D1109_RS07285;old_locus_tag=D1109_07305 NZ_CP031858.1 Protein Homology CDS 1496370 1498451 . - 0 ID=cds-WP_005613379.1;Parent=gene-D1109_RS07285;Dbxref=Genbank:WP_005613379.1;Name=WP_005613379.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875323.1;locus_tag=D1109_RS07285;product=ATP-dependent DNA helicase RecG;protein_id=WP_005613379.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1498575 1498940 . - . ID=gene-D1109_RS07290;Name=D1109_RS07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07290;old_locus_tag=D1109_07310 NZ_CP031858.1 Protein Homology CDS 1498575 1498940 . - 0 ID=cds-WP_005599445.1;Parent=gene-D1109_RS07290;Dbxref=Genbank:WP_005599445.1;Name=WP_005599445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005606490.1;locus_tag=D1109_RS07290;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_005599445.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1499003 1499290 . - . ID=gene-D1109_RS07295;Name=D1109_RS07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07295;old_locus_tag=D1109_07315 NZ_CP031858.1 Protein Homology CDS 1499003 1499290 . - 0 ID=cds-WP_005599447.1;Parent=gene-D1109_RS07295;Dbxref=Genbank:WP_005599447.1;Name=WP_005599447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599447.1;locus_tag=D1109_RS07295;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_005599447.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1499496 1501211 . + . ID=gene-D1109_RS07300;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=D1109_RS07300;old_locus_tag=D1109_07320 NZ_CP031858.1 Protein Homology CDS 1499496 1501211 . + 0 ID=cds-WP_237610951.1;Parent=gene-D1109_RS07300;Dbxref=Genbank:WP_237610951.1;Name=WP_237610951.1;Ontology_term=GO:0006433,GO:0004827;gbkey=CDS;gene=proS;go_function=proline-tRNA ligase activity|0004827||IEA;go_process=prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248268.1;locus_tag=D1109_RS07300;product=proline--tRNA ligase;protein_id=WP_237610951.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1501277 1501465 . - . ID=gene-D1109_RS07305;Name=D1109_RS07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07305;old_locus_tag=D1109_07325 NZ_CP031858.1 Protein Homology CDS 1501277 1501465 . - 0 ID=cds-WP_005602684.1;Parent=gene-D1109_RS07305;Dbxref=Genbank:WP_005602684.1;Name=WP_005602684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618305.1;locus_tag=D1109_RS07305;product=hypothetical protein;protein_id=WP_005602684.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1501468 1502049 . - . ID=gene-D1109_RS07310;Name=D1109_RS07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07310;old_locus_tag=D1109_07330 NZ_CP031858.1 Protein Homology CDS 1501468 1502049 . - 0 ID=cds-WP_005606496.1;Parent=gene-D1109_RS07310;Dbxref=Genbank:WP_005606496.1;Name=WP_005606496.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription%2C initiation|0006352||IEA,regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263407.1;locus_tag=D1109_RS07310;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_005606496.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1502137 1503093 . + . ID=gene-D1109_RS07315;Name=msrP;gbkey=Gene;gene=msrP;gene_biotype=protein_coding;locus_tag=D1109_RS07315;old_locus_tag=D1109_07335 NZ_CP031858.1 Protein Homology CDS 1502137 1503093 . + 0 ID=cds-WP_237610952.1;Parent=gene-D1109_RS07315;Dbxref=Genbank:WP_237610952.1;Name=WP_237610952.1;Ontology_term=GO:0030091,GO:0016667,GO:0043546;gbkey=CDS;gene=msrP;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA,molybdopterin cofactor binding|0043546||IEA;go_process=protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263408.1;locus_tag=D1109_RS07315;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=WP_237610952.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1503093 1503686 . + . ID=gene-D1109_RS07320;Name=D1109_RS07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07320;old_locus_tag=D1109_07340 NZ_CP031858.1 Protein Homology CDS 1503093 1503686 . + 0 ID=cds-WP_005599453.1;Parent=gene-D1109_RS07320;Dbxref=Genbank:WP_005599453.1;Name=WP_005599453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005606498.1;locus_tag=D1109_RS07320;product=sulfoxide reductase heme-binding subunit YedZ;protein_id=WP_005599453.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1503797 1504747 . - . ID=gene-D1109_RS07325;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=D1109_RS07325;old_locus_tag=D1109_07345 NZ_CP031858.1 Protein Homology CDS 1503797 1504747 . - 0 ID=cds-WP_005602687.1;Parent=gene-D1109_RS07325;Dbxref=Genbank:WP_005602687.1;Name=WP_005602687.1;Ontology_term=GO:0006352,GO:0016987;gbkey=CDS;gene=rpoH;go_function=sigma factor activity|0016987||IEA;go_process=DNA-templated transcription%2C initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599455.1;locus_tag=D1109_RS07325;product=RNA polymerase sigma factor RpoH;protein_id=WP_005602687.1;transl_table=11 NZ_CP031858.1 RefSeq pseudogene 1504896 1506233 . - . ID=gene-D1109_RS07330;Name=D1109_RS07330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D1109_RS07330;old_locus_tag=D1109_07350;pseudo=true NZ_CP031858.1 Protein Homology CDS 1504896 1506233 . - 0 ID=cds-D1109_RS07330;Parent=gene-D1109_RS07330;Note=internal stop;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015674079.1;locus_tag=D1109_RS07330;product=MFS transporter;pseudo=true;transl_table=11 NZ_CP031858.1 RefSeq gene 1506412 1506777 . + . ID=gene-D1109_RS07335;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=D1109_RS07335;old_locus_tag=D1109_07355 NZ_CP031858.1 cmsearch tmRNA 1506412 1506777 . + . ID=rna-D1109_RS07335;Parent=gene-D1109_RS07335;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D1109_RS07335;product=transfer-messenger RNA NZ_CP031858.1 cmsearch exon 1506412 1506777 . + . ID=exon-D1109_RS07335-1;Parent=rna-D1109_RS07335;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D1109_RS07335;product=transfer-messenger RNA NZ_CP031858.1 RefSeq gene 1506808 1507320 . + . ID=gene-D1109_RS07340;Name=D1109_RS07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07340;old_locus_tag=D1109_07360 NZ_CP031858.1 Protein Homology CDS 1506808 1507320 . + 0 ID=cds-WP_005602690.1;Parent=gene-D1109_RS07340;Dbxref=Genbank:WP_005602690.1;Name=WP_005602690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005616204.1;locus_tag=D1109_RS07340;product=hypothetical protein;protein_id=WP_005602690.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1507323 1507790 . + . ID=gene-D1109_RS07345;Name=D1109_RS07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07345;old_locus_tag=D1109_07365 NZ_CP031858.1 Protein Homology CDS 1507323 1507790 . + 0 ID=cds-WP_005619041.1;Parent=gene-D1109_RS07345;Dbxref=Genbank:WP_005619041.1;Name=WP_005619041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005619041.1;locus_tag=D1109_RS07345;product=type II toxin-antitoxin system YafO family toxin;protein_id=WP_005619041.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1507833 1508825 . - . ID=gene-D1109_RS07350;Name=asnA;gbkey=Gene;gene=asnA;gene_biotype=protein_coding;locus_tag=D1109_RS07350;old_locus_tag=D1109_07370 NZ_CP031858.1 Protein Homology CDS 1507833 1508825 . - 0 ID=cds-WP_005602692.1;Parent=gene-D1109_RS07350;Dbxref=Genbank:WP_005602692.1;Name=WP_005602692.1;Ontology_term=GO:0006529,GO:0004071;gbkey=CDS;gene=asnA;go_function=aspartate-ammonia ligase activity|0004071||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015701738.1;locus_tag=D1109_RS07350;product=aspartate--ammonia ligase;protein_id=WP_005602692.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1509007 1509468 . + . ID=gene-D1109_RS07355;Name=asnC;gbkey=Gene;gene=asnC;gene_biotype=protein_coding;locus_tag=D1109_RS07355;old_locus_tag=D1109_07375 NZ_CP031858.1 Protein Homology CDS 1509007 1509468 . + 0 ID=cds-WP_005599463.1;Parent=gene-D1109_RS07355;Dbxref=Genbank:WP_005599463.1;Name=WP_005599463.1;Ontology_term=GO:0043565;gbkey=CDS;gene=asnC;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599463.1;locus_tag=D1109_RS07355;product=transcriptional regulator AsnC;protein_id=WP_005599463.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1509657 1510421 . + . ID=gene-D1109_RS07360;Name=udp;gbkey=Gene;gene=udp;gene_biotype=protein_coding;locus_tag=D1109_RS07360;old_locus_tag=D1109_07380 NZ_CP031858.1 Protein Homology CDS 1509657 1510421 . + 0 ID=cds-WP_005599465.1;Parent=gene-D1109_RS07360;Dbxref=Genbank:WP_005599465.1;Name=WP_005599465.1;Ontology_term=GO:0009116,GO:0016763;gbkey=CDS;gene=udp;go_function=pentosyltransferase activity|0016763||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011848664.1;locus_tag=D1109_RS07360;product=uridine phosphorylase;protein_id=WP_005599465.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1510485 1510967 . + . ID=gene-D1109_RS07365;Name=D1109_RS07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07365;old_locus_tag=D1109_07385 NZ_CP031858.1 Protein Homology CDS 1510485 1510967 . + 0 ID=cds-WP_005609274.1;Parent=gene-D1109_RS07365;Dbxref=Genbank:WP_005609274.1;Name=WP_005609274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005613390.1;locus_tag=D1109_RS07365;product=chorismate lyase;protein_id=WP_005609274.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1511039 1511836 . + . ID=gene-D1109_RS07370;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=D1109_RS07370;old_locus_tag=D1109_07390 NZ_CP031858.1 Protein Homology CDS 1511039 1511836 . + 0 ID=cds-WP_005609277.1;Parent=gene-D1109_RS07370;Dbxref=Genbank:WP_005609277.1;Name=WP_005609277.1;Ontology_term=GO:0009252,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014992310.1;locus_tag=D1109_RS07370;product=glutamate racemase;protein_id=WP_005609277.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1512209 1513750 . + . ID=gene-D1109_RS07375;Name=D1109_RS07375;gbkey=Gene;gene_biotype=rRNA;locus_tag=D1109_RS07375;old_locus_tag=D1109_07395 NZ_CP031858.1 cmsearch rRNA 1512209 1513750 . + . ID=rna-D1109_RS07375;Parent=gene-D1109_RS07375;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D1109_RS07375;product=16S ribosomal RNA NZ_CP031858.1 cmsearch exon 1512209 1513750 . + . ID=exon-D1109_RS07375-1;Parent=rna-D1109_RS07375;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D1109_RS07375;product=16S ribosomal RNA NZ_CP031858.1 RefSeq gene 1513833 1513909 . + . ID=gene-D1109_RS07380;Name=D1109_RS07380;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS07380;old_locus_tag=D1109_07400 NZ_CP031858.1 tRNAscan-SE tRNA 1513833 1513909 . + . ID=rna-D1109_RS07380;Parent=gene-D1109_RS07380;anticodon=(pos:1513867..1513869);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS07380;product=tRNA-Ile NZ_CP031858.1 tRNAscan-SE exon 1513833 1513909 . + . ID=exon-D1109_RS07380-1;Parent=rna-D1109_RS07380;anticodon=(pos:1513867..1513869);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS07380;product=tRNA-Ile NZ_CP031858.1 RefSeq gene 1513961 1514036 . + . ID=gene-D1109_RS07385;Name=D1109_RS07385;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS07385;old_locus_tag=D1109_07405 NZ_CP031858.1 tRNAscan-SE tRNA 1513961 1514036 . + . ID=rna-D1109_RS07385;Parent=gene-D1109_RS07385;anticodon=(pos:1513994..1513996);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS07385;product=tRNA-Ala NZ_CP031858.1 tRNAscan-SE exon 1513961 1514036 . + . ID=exon-D1109_RS07385-1;Parent=rna-D1109_RS07385;anticodon=(pos:1513994..1513996);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS07385;product=tRNA-Ala NZ_CP031858.1 RefSeq gene 1514303 1517204 . + . ID=gene-D1109_RS07390;Name=D1109_RS07390;gbkey=Gene;gene_biotype=rRNA;locus_tag=D1109_RS07390;old_locus_tag=D1109_07410 NZ_CP031858.1 cmsearch rRNA 1514303 1517204 . + . ID=rna-D1109_RS07390;Parent=gene-D1109_RS07390;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D1109_RS07390;product=23S ribosomal RNA NZ_CP031858.1 cmsearch exon 1514303 1517204 . + . ID=exon-D1109_RS07390-1;Parent=rna-D1109_RS07390;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D1109_RS07390;product=23S ribosomal RNA NZ_CP031858.1 RefSeq gene 1517364 1517479 . + . ID=gene-D1109_RS07395;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=D1109_RS07395;old_locus_tag=D1109_07415 NZ_CP031858.1 cmsearch rRNA 1517364 1517479 . + . ID=rna-D1109_RS07395;Parent=gene-D1109_RS07395;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D1109_RS07395;product=5S ribosomal RNA NZ_CP031858.1 cmsearch exon 1517364 1517479 . + . ID=exon-D1109_RS07395-1;Parent=rna-D1109_RS07395;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D1109_RS07395;product=5S ribosomal RNA NZ_CP031858.1 RefSeq gene 1518025 1519791 . - . ID=gene-D1109_RS07400;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=protein_coding;locus_tag=D1109_RS07400;old_locus_tag=D1109_07420 NZ_CP031858.1 Protein Homology CDS 1518025 1519791 . - 0 ID=cds-WP_237610953.1;Parent=gene-D1109_RS07400;Dbxref=Genbank:WP_237610953.1;Name=WP_237610953.1;Ontology_term=GO:0000103,GO:0004783;gbkey=CDS;gene=cysI;go_function=sulfite reductase (NADPH) activity|0004783||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874955.1;locus_tag=D1109_RS07400;product=assimilatory sulfite reductase (NADPH) hemoprotein subunit;protein_id=WP_237610953.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1519819 1521630 . - . ID=gene-D1109_RS07405;Name=D1109_RS07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07405;old_locus_tag=D1109_07425 NZ_CP031858.1 Protein Homology CDS 1519819 1521630 . - 0 ID=cds-WP_012263412.1;Parent=gene-D1109_RS07405;Dbxref=Genbank:WP_012263412.1;Name=WP_012263412.1;Ontology_term=GO:0006790,GO:0004783,GO:0009337;gbkey=CDS;go_component=sulfite reductase complex (NADPH)|0009337||IEA;go_function=sulfite reductase (NADPH) activity|0004783||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005609287.1;locus_tag=D1109_RS07405;product=assimilatory sulfite reductase (NADPH) flavoprotein subunit;protein_id=WP_012263412.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1521931 1523223 . - . ID=gene-D1109_RS07410;Name=D1109_RS07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07410;old_locus_tag=D1109_07430 NZ_CP031858.1 Protein Homology CDS 1521931 1523223 . - 0 ID=cds-WP_012263413.1;Parent=gene-D1109_RS07410;Dbxref=Genbank:WP_012263413.1;Name=WP_012263413.1;Ontology_term=GO:0005525;gbkey=CDS;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014992212.1;locus_tag=D1109_RS07410;product=GTP-binding protein;protein_id=WP_012263413.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1523306 1524232 . - . ID=gene-D1109_RS07415;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=D1109_RS07415;old_locus_tag=D1109_07435 NZ_CP031858.1 Protein Homology CDS 1523306 1524232 . - 0 ID=cds-WP_012263414.1;Parent=gene-D1109_RS07415;Dbxref=Genbank:WP_012263414.1;Name=WP_012263414.1;Ontology_term=GO:0019419,GO:0004781;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate reduction|0019419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014992213.1;locus_tag=D1109_RS07415;product=sulfate adenylyltransferase subunit CysD;protein_id=WP_012263414.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1524247 1524981 . - . ID=gene-D1109_RS07420;Name=D1109_RS07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07420;old_locus_tag=D1109_07440 NZ_CP031858.1 Protein Homology CDS 1524247 1524981 . - 0 ID=cds-WP_012263415.1;Parent=gene-D1109_RS07420;Dbxref=Genbank:WP_012263415.1;Name=WP_012263415.1;Ontology_term=GO:0019379,GO:0003824,GO:0004604;gbkey=CDS;go_function=catalytic activity|0003824||IEA,phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005616214.1;locus_tag=D1109_RS07420;product=phosphoadenylyl-sulfate reductase;protein_id=WP_012263415.1;transl_table=11 NZ_CP031858.1 RefSeq pseudogene 1524995 1526456 . - . ID=gene-D1109_RS07425;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=pseudogene;locus_tag=D1109_RS07425;old_locus_tag=D1109_07445;pseudo=true NZ_CP031858.1 Protein Homology CDS 1524995 1526456 . - 0 ID=cds-D1109_RS07425;Parent=gene-D1109_RS07425;Note=frameshifted;Ontology_term=GO:0019354,GO:0004851,GO:0043115,GO:0051266,GO:0051287;gbkey=CDS;gene=cysG;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,sirohydrochlorin ferrochelatase activity|0051266||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018650784.1;locus_tag=D1109_RS07425;product=siroheme synthase CysG;pseudo=true;transl_table=11 NZ_CP031858.1 RefSeq gene 1526731 1527735 . + . ID=gene-D1109_RS07430;Name=D1109_RS07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07430;old_locus_tag=D1109_07450 NZ_CP031858.1 Protein Homology CDS 1526731 1527735 . + 0 ID=cds-WP_237610954.1;Parent=gene-D1109_RS07430;Dbxref=Genbank:WP_237610954.1;Name=WP_237610954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018650783.1;locus_tag=D1109_RS07430;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_237610954.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1527754 1528566 . + . ID=gene-D1109_RS07435;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=D1109_RS07435;old_locus_tag=D1109_07455 NZ_CP031858.1 Protein Homology CDS 1527754 1528566 . + 0 ID=cds-WP_237610955.1;Parent=gene-D1109_RS07435;Dbxref=Genbank:WP_237610955.1;Name=WP_237610955.1;Ontology_term=GO:0008272,GO:0015419,GO:0005887,GO:0055052;gbkey=CDS;gene=cysT;go_component=integral component of plasma membrane|0005887||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transport|0008272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014992217.1;locus_tag=D1109_RS07435;product=sulfate ABC transporter permease subunit CysT;protein_id=WP_237610955.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1528585 1529400 . + . ID=gene-D1109_RS07440;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=D1109_RS07440;old_locus_tag=D1109_07460 NZ_CP031858.1 Protein Homology CDS 1528585 1529400 . + 0 ID=cds-WP_237610956.1;Parent=gene-D1109_RS07440;Dbxref=Genbank:WP_237610956.1;Name=WP_237610956.1;Ontology_term=GO:0008272,GO:0015419,GO:0005887,GO:0055052;gbkey=CDS;gene=cysW;go_component=integral component of plasma membrane|0005887||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transport|0008272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005609297.1;locus_tag=D1109_RS07440;product=sulfate ABC transporter permease subunit CysW;protein_id=WP_237610956.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1529411 1530481 . + . ID=gene-D1109_RS07445;Name=D1109_RS07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07445;old_locus_tag=D1109_07465 NZ_CP031858.1 Protein Homology CDS 1529411 1530481 . + 0 ID=cds-WP_237610957.1;Parent=gene-D1109_RS07445;Dbxref=Genbank:WP_237610957.1;Name=WP_237610957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599489.1;locus_tag=D1109_RS07445;product=sulfate ABC transporter ATP-binding protein;protein_id=WP_237610957.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1530570 1531715 . - . ID=gene-D1109_RS07450;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=D1109_RS07450;old_locus_tag=D1109_07470 NZ_CP031858.1 Protein Homology CDS 1530570 1531715 . - 0 ID=cds-WP_005599497.1;Parent=gene-D1109_RS07450;Dbxref=Genbank:WP_005599497.1;Name=WP_005599497.1;Ontology_term=GO:0006089,GO:0004457,GO:0010181;gbkey=CDS;gene=lldD;go_function=lactate dehydrogenase activity|0004457||IEA,FMN binding|0010181||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015674093.1;locus_tag=D1109_RS07450;product=FMN-dependent L-lactate dehydrogenase LldD;protein_id=WP_005599497.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1531899 1532663 . - . ID=gene-D1109_RS07455;Name=D1109_RS07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07455;old_locus_tag=D1109_07475 NZ_CP031858.1 Protein Homology CDS 1531899 1532663 . - 0 ID=cds-WP_005599499.1;Parent=gene-D1109_RS07455;Dbxref=Genbank:WP_005599499.1;Name=WP_005599499.1;Ontology_term=GO:0006464,GO:0004077;gbkey=CDS;go_function=biotin-[acetyl-CoA-carboxylase] ligase activity|0004077||IEA;go_process=cellular protein modification process|0006464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005616228.1;locus_tag=D1109_RS07455;product=biotin--[acetyl-CoA-carboxylase] ligase;protein_id=WP_005599499.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1532672 1533706 . - . ID=gene-D1109_RS07460;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=D1109_RS07460;old_locus_tag=D1109_07480 NZ_CP031858.1 Protein Homology CDS 1532672 1533706 . - 0 ID=cds-WP_005599502.1;Parent=gene-D1109_RS07460;Dbxref=Genbank:WP_005599502.1;Name=WP_005599502.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599502.1;locus_tag=D1109_RS07460;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_005599502.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1533855 1534949 . - . ID=gene-D1109_RS07465;Name=ompA;gbkey=Gene;gene=ompA;gene_biotype=protein_coding;locus_tag=D1109_RS07465;old_locus_tag=D1109_07485 NZ_CP031858.1 Protein Homology CDS 1533855 1534949 . - 0 ID=cds-WP_005599504.1;Parent=gene-D1109_RS07465;Dbxref=Genbank:WP_005599504.1;Name=WP_005599504.1;gbkey=CDS;gene=ompA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025267438.1;locus_tag=D1109_RS07465;product=porin OmpA;protein_id=WP_005599504.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1535338 1536819 . - . ID=gene-D1109_RS07470;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=D1109_RS07470;old_locus_tag=D1109_07490 NZ_CP031858.1 Protein Homology CDS 1535338 1536819 . - 0 ID=cds-WP_005602730.1;Parent=gene-D1109_RS07470;Dbxref=Genbank:WP_005602730.1;Name=WP_005602730.1;Ontology_term=GO:0009082,GO:0004455;gbkey=CDS;gene=ilvC;go_function=ketol-acid reductoisomerase activity|0004455||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011199229.1;locus_tag=D1109_RS07470;product=ketol-acid reductoisomerase;protein_id=WP_005602730.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1537056 1538297 . + . ID=gene-D1109_RS07475;Name=D1109_RS07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07475;old_locus_tag=D1109_07495 NZ_CP031858.1 Protein Homology CDS 1537056 1538297 . + 0 ID=cds-WP_005609304.1;Parent=gene-D1109_RS07475;Dbxref=Genbank:WP_005609304.1;Name=WP_005609304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618324.1;locus_tag=D1109_RS07475;product=paraquat-inducible protein A;protein_id=WP_005609304.1;transl_table=11 NZ_CP031858.1 RefSeq pseudogene 1538474 1539574 . + . ID=gene-D1109_RS07480;Name=D1109_RS07480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D1109_RS07480;old_locus_tag=D1109_07500;pseudo=true NZ_CP031858.1 Protein Homology CDS 1538474 1539574 . + 0 ID=cds-D1109_RS07480;Parent=gene-D1109_RS07480;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005622197.1;locus_tag=D1109_RS07480;product=transglutaminase family protein;pseudo=true;transl_table=11 NZ_CP031858.1 RefSeq gene 1539546 1539899 . + . ID=gene-D1109_RS07485;Name=D1109_RS07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07485;old_locus_tag=D1109_07505 NZ_CP031858.1 Protein Homology CDS 1539546 1539899 . + 0 ID=cds-WP_005599511.1;Parent=gene-D1109_RS07485;Dbxref=Genbank:WP_005599511.1;Name=WP_005599511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599511.1;locus_tag=D1109_RS07485;product=mercuric transporter MerT family protein;protein_id=WP_005599511.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1539896 1540210 . + . ID=gene-D1109_RS07490;Name=D1109_RS07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07490;old_locus_tag=D1109_07510 NZ_CP031858.1 Protein Homology CDS 1539896 1540210 . + 0 ID=cds-WP_005599512.1;Parent=gene-D1109_RS07490;Dbxref=Genbank:WP_005599512.1;Name=WP_005599512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005609307.1;locus_tag=D1109_RS07490;product=heavy-metal-associated domain-containing protein;protein_id=WP_005599512.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1540651 1541835 . - . ID=gene-D1109_RS07495;Name=D1109_RS07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07495;old_locus_tag=D1109_07515 NZ_CP031858.1 Protein Homology CDS 1540651 1541835 . - 0 ID=cds-WP_005616241.1;Parent=gene-D1109_RS07495;Dbxref=Genbank:WP_005616241.1;Name=WP_005616241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005616241.1;locus_tag=D1109_RS07495;product=iron-containing alcohol dehydrogenase;protein_id=WP_005616241.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1541951 1542712 . + . ID=gene-D1109_RS07500;Name=D1109_RS07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07500;old_locus_tag=D1109_07520 NZ_CP031858.1 Protein Homology CDS 1541951 1542712 . + 0 ID=cds-WP_237610958.1;Parent=gene-D1109_RS07500;Dbxref=Genbank:WP_237610958.1;Name=WP_237610958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618327.1;locus_tag=D1109_RS07500;product=LysR family transcriptional regulator;protein_id=WP_237610958.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1542916 1543740 . + . ID=gene-D1109_RS07505;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=D1109_RS07505;old_locus_tag=D1109_07525 NZ_CP031858.1 Protein Homology CDS 1542916 1543740 . + 0 ID=cds-WP_005599515.1;Parent=gene-D1109_RS07505;Dbxref=Genbank:WP_005599515.1;Name=WP_005599515.1;Ontology_term=GO:0009089,GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018650734.1;locus_tag=D1109_RS07505;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_005599515.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1543805 1544269 . + . ID=gene-D1109_RS07510;Name=aroQ;gbkey=Gene;gene=aroQ;gene_biotype=protein_coding;locus_tag=D1109_RS07510;old_locus_tag=D1109_07530 NZ_CP031858.1 Protein Homology CDS 1543805 1544269 . + 0 ID=cds-WP_237610959.1;Parent=gene-D1109_RS07510;Dbxref=Genbank:WP_237610959.1;Name=WP_237610959.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroQ;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014992257.1;locus_tag=D1109_RS07510;product=type II 3-dehydroquinate dehydratase;protein_id=WP_237610959.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1544262 1545050 . + . ID=gene-D1109_RS07515;Name=D1109_RS07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07515;old_locus_tag=D1109_07535 NZ_CP031858.1 Protein Homology CDS 1544262 1545050 . + 0 ID=cds-WP_005599519.1;Parent=gene-D1109_RS07515;Dbxref=Genbank:WP_005599519.1;Name=WP_005599519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005609325.1;locus_tag=D1109_RS07515;product=glycosyl transferase;protein_id=WP_005599519.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1545221 1545682 . + . ID=gene-D1109_RS07520;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=D1109_RS07520;old_locus_tag=D1109_07540 NZ_CP031858.1 Protein Homology CDS 1545221 1545682 . + 0 ID=cds-WP_005599520.1;Parent=gene-D1109_RS07520;Dbxref=Genbank:WP_005599520.1;Name=WP_005599520.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005616246.1;locus_tag=D1109_RS07520;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_005599520.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1545838 1547181 . + . ID=gene-D1109_RS07525;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=D1109_RS07525;old_locus_tag=D1109_07545 NZ_CP031858.1 Protein Homology CDS 1545838 1547181 . + 0 ID=cds-WP_005605929.1;Parent=gene-D1109_RS07525;Dbxref=Genbank:WP_005605929.1;Name=WP_005605929.1;Ontology_term=GO:0006633,GO:0003989,GO:0004075,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA,biotin carboxylase activity|0004075||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015431873.1;locus_tag=D1109_RS07525;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_005605929.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1547224 1548315 . - . ID=gene-D1109_RS07530;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=D1109_RS07530;old_locus_tag=D1109_07550 NZ_CP031858.1 Protein Homology CDS 1547224 1548315 . - 0 ID=cds-WP_005609327.1;Parent=gene-D1109_RS07530;Dbxref=Genbank:WP_005609327.1;Name=WP_005609327.1;Ontology_term=GO:0006777;gbkey=CDS;gene=mobA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005616250.1;locus_tag=D1109_RS07530;product=molybdenum cofactor guanylyltransferase MobA;protein_id=WP_005609327.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1548402 1548671 . + . ID=gene-D1109_RS07535;Name=D1109_RS07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07535;old_locus_tag=D1109_07555 NZ_CP031858.1 Protein Homology CDS 1548402 1548671 . + 0 ID=cds-WP_005609328.1;Parent=gene-D1109_RS07535;Dbxref=Genbank:WP_005609328.1;Name=WP_005609328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599524.1;locus_tag=D1109_RS07535;product=DUF1040 family protein;protein_id=WP_005609328.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1548715 1549353 . + . ID=gene-D1109_RS07540;Name=D1109_RS07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07540;old_locus_tag=D1109_07560 NZ_CP031858.1 Protein Homology CDS 1548715 1549353 . + 0 ID=cds-WP_005602749.1;Parent=gene-D1109_RS07540;Dbxref=Genbank:WP_005602749.1;Name=WP_005602749.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005602749.1;locus_tag=D1109_RS07540;product=DsbA family protein;protein_id=WP_005602749.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1549572 1550030 . - . ID=gene-D1109_RS07545;Name=D1109_RS07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07545;old_locus_tag=D1109_07565 NZ_CP031858.1 Protein Homology CDS 1549572 1550030 . - 0 ID=cds-WP_237610960.1;Parent=gene-D1109_RS07545;Dbxref=Genbank:WP_237610960.1;Name=WP_237610960.1;Ontology_term=GO:0006313;gbkey=CDS;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013068.2;locus_tag=D1109_RS07545;product=transposase;protein_id=WP_237610960.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1550133 1551056 . - . ID=gene-D1109_RS07550;Name=ftsN;gbkey=Gene;gene=ftsN;gene_biotype=protein_coding;locus_tag=D1109_RS07550;old_locus_tag=D1109_07570 NZ_CP031858.1 Protein Homology CDS 1550133 1551056 . - 0 ID=cds-WP_005599530.1;Parent=gene-D1109_RS07550;Dbxref=Genbank:WP_005599530.1;Name=WP_005599530.1;Ontology_term=GO:0000910;gbkey=CDS;gene=ftsN;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005613437.1;locus_tag=D1109_RS07550;product=cell division protein FtsN;protein_id=WP_005599530.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1551168 1551923 . - . ID=gene-D1109_RS07555;Name=D1109_RS07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07555;old_locus_tag=D1109_07575 NZ_CP031858.1 Protein Homology CDS 1551168 1551923 . - 0 ID=cds-WP_005602753.1;Parent=gene-D1109_RS07555;Dbxref=Genbank:WP_005602753.1;Name=WP_005602753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005616256.1;locus_tag=D1109_RS07555;product=class I SAM-dependent methyltransferase;protein_id=WP_005602753.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1551941 1552609 . - . ID=gene-D1109_RS07560;Name=D1109_RS07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07560;old_locus_tag=D1109_07580 NZ_CP031858.1 Protein Homology CDS 1551941 1552609 . - 0 ID=cds-WP_005602755.1;Parent=gene-D1109_RS07560;Dbxref=Genbank:WP_005602755.1;Name=WP_005602755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599534.1;locus_tag=D1109_RS07560;product=M15 family metallopeptidase;protein_id=WP_005602755.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1552628 1553761 . - . ID=gene-D1109_RS07565;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=D1109_RS07565;old_locus_tag=D1109_07585 NZ_CP031858.1 Protein Homology CDS 1552628 1553761 . - 0 ID=cds-WP_043991929.1;Parent=gene-D1109_RS07565;Dbxref=Genbank:WP_043991929.1;Name=WP_043991929.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014992265.1;locus_tag=D1109_RS07565;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_043991929.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1553784 1554134 . - . ID=gene-D1109_RS07570;Name=D1109_RS07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07570;old_locus_tag=D1109_07590 NZ_CP031858.1 Protein Homology CDS 1553784 1554134 . - 0 ID=cds-WP_005619049.1;Parent=gene-D1109_RS07570;Dbxref=Genbank:WP_005619049.1;Name=WP_005619049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005619049.1;locus_tag=D1109_RS07570;product=ArsC family reductase;protein_id=WP_005619049.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1554342 1555052 . + . ID=gene-D1109_RS07575;Name=D1109_RS07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07575;old_locus_tag=D1109_07595 NZ_CP031858.1 Protein Homology CDS 1554342 1555052 . + 0 ID=cds-WP_005616260.1;Parent=gene-D1109_RS07575;Dbxref=Genbank:WP_005616260.1;Name=WP_005616260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263433.1;locus_tag=D1109_RS07575;product=DUF5358 family protein;protein_id=WP_005616260.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1555103 1555948 . - . ID=gene-D1109_RS07580;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=D1109_RS07580;old_locus_tag=D1109_07600 NZ_CP031858.1 Protein Homology CDS 1555103 1555948 . - 0 ID=cds-WP_005599543.1;Parent=gene-D1109_RS07580;Dbxref=Genbank:WP_005599543.1;Name=WP_005599543.1;Ontology_term=GO:0009396,GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014992268.1;locus_tag=D1109_RS07580;product=dihydropteroate synthase;protein_id=WP_005599543.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1556010 1556975 . - . ID=gene-D1109_RS07585;Name=rluC;gbkey=Gene;gene=rluC;gene_biotype=protein_coding;locus_tag=D1109_RS07585;old_locus_tag=D1109_07605 NZ_CP031858.1 Protein Homology CDS 1556010 1556975 . - 0 ID=cds-WP_005620011.1;Parent=gene-D1109_RS07585;Dbxref=Genbank:WP_005620011.1;Name=WP_005620011.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=rluC;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005620011.1;locus_tag=D1109_RS07585;product=23S rRNA pseudouridine(955/2504/2580) synthase RluC;protein_id=WP_005620011.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1557368 1559686 . + . ID=gene-D1109_RS07590;Name=D1109_RS07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07590;old_locus_tag=D1109_07610 NZ_CP031858.1 Protein Homology CDS 1557368 1559686 . + 0 ID=cds-WP_237611494.1;Parent=gene-D1109_RS07590;Dbxref=Genbank:WP_237611494.1;Name=WP_237611494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599547.1;locus_tag=D1109_RS07590;product=TonB-dependent receptor plug domain-containing protein;protein_id=WP_237611494.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1559842 1560753 . + . ID=gene-D1109_RS07595;Name=D1109_RS07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07595;old_locus_tag=D1109_07615 NZ_CP031858.1 Protein Homology CDS 1559842 1560753 . + 0 ID=cds-WP_005605950.1;Parent=gene-D1109_RS07595;Dbxref=Genbank:WP_005605950.1;Name=WP_005605950.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014992273.1;locus_tag=D1109_RS07595;product=mechanosensitive ion channel;protein_id=WP_005605950.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1560949 1562127 . + . ID=gene-D1109_RS07600;Name=D1109_RS07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07600;old_locus_tag=D1109_07620 NZ_CP031858.1 Protein Homology CDS 1560949 1562127 . + 0 ID=cds-WP_237610961.1;Parent=gene-D1109_RS07600;Dbxref=Genbank:WP_237610961.1;Name=WP_237610961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005602767.1;locus_tag=D1109_RS07600;product=ATP-grasp domain-containing protein;protein_id=WP_237610961.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1562139 1562891 . + . ID=gene-D1109_RS07605;Name=D1109_RS07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07605;old_locus_tag=D1109_07625 NZ_CP031858.1 Protein Homology CDS 1562139 1562891 . + 0 ID=cds-WP_237610962.1;Parent=gene-D1109_RS07605;Dbxref=Genbank:WP_237610962.1;Name=WP_237610962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018650716.1;locus_tag=D1109_RS07605;product=alpha/beta hydrolase-fold protein;protein_id=WP_237610962.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1562959 1565919 . - . ID=gene-D1109_RS07610;Name=ptrA;gbkey=Gene;gene=ptrA;gene_biotype=protein_coding;locus_tag=D1109_RS07610;old_locus_tag=D1109_07630 NZ_CP031858.1 Protein Homology CDS 1562959 1565919 . - 0 ID=cds-WP_237610963.1;Parent=gene-D1109_RS07610;Dbxref=Genbank:WP_237610963.1;Name=WP_237610963.1;Ontology_term=GO:0006508,GO:0004222,GO:0046872;gbkey=CDS;gene=ptrA;go_function=metalloendopeptidase activity|0004222||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012478599.1;locus_tag=D1109_RS07610;product=pitrilysin;protein_id=WP_237610963.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1565916 1569260 . - . ID=gene-D1109_RS07615;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=D1109_RS07615;old_locus_tag=D1109_07635 NZ_CP031858.1 Protein Homology CDS 1565916 1569260 . - 0 ID=cds-WP_237610964.1;Parent=gene-D1109_RS07615;Dbxref=Genbank:WP_237610964.1;Name=WP_237610964.1;Ontology_term=GO:0006281,GO:0006310,GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263438.1;locus_tag=D1109_RS07615;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_237610964.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1569365 1569661 . - . ID=gene-D1109_RS07620;Name=D1109_RS07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07620;old_locus_tag=D1109_07640 NZ_CP031858.1 Protein Homology CDS 1569365 1569661 . - 0 ID=cds-WP_005605960.1;Parent=gene-D1109_RS07620;Dbxref=Genbank:WP_005605960.1;Name=WP_005605960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263439.1;locus_tag=D1109_RS07620;product=DUF5374 domain-containing protein;protein_id=WP_005605960.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1569651 1570307 . - . ID=gene-D1109_RS07625;Name=D1109_RS07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07625;old_locus_tag=D1109_07645 NZ_CP031858.1 Protein Homology CDS 1569651 1570307 . - 0 ID=cds-WP_005599575.1;Parent=gene-D1109_RS07625;Dbxref=Genbank:WP_005599575.1;Name=WP_005599575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263440.1;locus_tag=D1109_RS07625;product=DUF2572 family protein;protein_id=WP_005599575.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1570317 1570949 . - . ID=gene-D1109_RS07630;Name=D1109_RS07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07630;old_locus_tag=D1109_07650 NZ_CP031858.1 Protein Homology CDS 1570317 1570949 . - 0 ID=cds-WP_005609356.1;Parent=gene-D1109_RS07630;Dbxref=Genbank:WP_005609356.1;Name=WP_005609356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005602772.1;locus_tag=D1109_RS07630;product=hypothetical protein;protein_id=WP_005609356.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1570975 1571505 . - . ID=gene-D1109_RS07635;Name=D1109_RS07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07635;old_locus_tag=D1109_07655 NZ_CP031858.1 Protein Homology CDS 1570975 1571505 . - 0 ID=cds-WP_005599579.1;Parent=gene-D1109_RS07635;Dbxref=Genbank:WP_005599579.1;Name=WP_005599579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005602773.1;locus_tag=D1109_RS07635;product=type II secretion system GspH family protein;protein_id=WP_005599579.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1571593 1572123 . - . ID=gene-D1109_RS07640;Name=fabA;gbkey=Gene;gene=fabA;gene_biotype=protein_coding;locus_tag=D1109_RS07640;old_locus_tag=D1109_07660 NZ_CP031858.1 Protein Homology CDS 1571593 1572123 . - 0 ID=cds-WP_005602774.1;Parent=gene-D1109_RS07640;Dbxref=Genbank:WP_005602774.1;Name=WP_005602774.1;Ontology_term=GO:0006633,GO:0008693;gbkey=CDS;gene=fabA;go_function=3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity|0008693||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006718349.1;locus_tag=D1109_RS07640;product=bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase;protein_id=WP_005602774.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1572234 1573871 . - . ID=gene-D1109_RS07645;Name=D1109_RS07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07645;old_locus_tag=D1109_07665 NZ_CP031858.1 Protein Homology CDS 1572234 1573871 . - 0 ID=cds-WP_005613451.1;Parent=gene-D1109_RS07645;Dbxref=Genbank:WP_005613451.1;Name=WP_005613451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874931.1;locus_tag=D1109_RS07645;product=AAA family ATPase;protein_id=WP_005613451.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1573956 1574402 . + . ID=gene-D1109_RS07650;Name=matP;gbkey=Gene;gene=matP;gene_biotype=protein_coding;locus_tag=D1109_RS07650;old_locus_tag=D1109_07670 NZ_CP031858.1 Protein Homology CDS 1573956 1574402 . + 0 ID=cds-WP_005616272.1;Parent=gene-D1109_RS07650;Dbxref=Genbank:WP_005616272.1;Name=WP_005616272.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=matP;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010944225.1;locus_tag=D1109_RS07650;product=macrodomain Ter protein MatP;protein_id=WP_005616272.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1574474 1575502 . - . ID=gene-D1109_RS07655;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=D1109_RS07655;old_locus_tag=D1109_07675 NZ_CP031858.1 Protein Homology CDS 1574474 1575502 . - 0 ID=cds-WP_005609360.1;Parent=gene-D1109_RS07655;Dbxref=Genbank:WP_005609360.1;Name=WP_005609360.1;Ontology_term=GO:0006436,GO:0004830;gbkey=CDS;gene=trpS;go_function=tryptophan-tRNA ligase activity|0004830||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005602776.1;locus_tag=D1109_RS07655;product=tryptophan--tRNA ligase;protein_id=WP_005609360.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1575642 1576307 . - . ID=gene-D1109_RS07660;Name=D1109_RS07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07660;old_locus_tag=D1109_07680 NZ_CP031858.1 Protein Homology CDS 1575642 1576307 . - 0 ID=cds-WP_237610965.1;Parent=gene-D1109_RS07660;Dbxref=Genbank:WP_237610965.1;Name=WP_237610965.1;Ontology_term=GO:0005975,GO:0008967;gbkey=CDS;go_function=phosphoglycolate phosphatase activity|0008967||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005619043.1;locus_tag=D1109_RS07660;product=phosphoglycolate phosphatase;protein_id=WP_237610965.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1576477 1576707 . - . ID=gene-D1109_RS07665;Name=D1109_RS07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07665;old_locus_tag=D1109_07685 NZ_CP031858.1 Protein Homology CDS 1576477 1576707 . - 0 ID=cds-WP_005599594.1;Parent=gene-D1109_RS07665;Dbxref=Genbank:WP_005599594.1;Name=WP_005599594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005610874.1;locus_tag=D1109_RS07665;product=hypothetical protein;protein_id=WP_005599594.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1576866 1577660 . - . ID=gene-D1109_RS07670;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=D1109_RS07670;old_locus_tag=D1109_07690 NZ_CP031858.1 Protein Homology CDS 1576866 1577660 . - 0 ID=cds-WP_005599596.1;Parent=gene-D1109_RS07670;Dbxref=Genbank:WP_005599596.1;Name=WP_005599596.1;Ontology_term=GO:0009249,GO:0008961,GO:0016021;gbkey=CDS;gene=lgt;go_component=integral component of membrane|0016021||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005624811.1;locus_tag=D1109_RS07670;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_005599596.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1577713 1578504 . - . ID=gene-D1109_RS07675;Name=D1109_RS07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07675;old_locus_tag=D1109_07695 NZ_CP031858.1 Protein Homology CDS 1577713 1578504 . - 0 ID=cds-WP_005605975.1;Parent=gene-D1109_RS07675;Dbxref=Genbank:WP_005605975.1;Name=WP_005605975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874926.1;locus_tag=D1109_RS07675;product=sulfite exporter TauE/SafE family protein;protein_id=WP_005605975.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1578501 1579121 . - . ID=gene-D1109_RS07680;Name=rppH;gbkey=Gene;gene=rppH;gene_biotype=protein_coding;locus_tag=D1109_RS07680;old_locus_tag=D1109_07700 NZ_CP031858.1 Protein Homology CDS 1578501 1579121 . - 0 ID=cds-WP_005616282.1;Parent=gene-D1109_RS07680;Dbxref=Genbank:WP_005616282.1;Name=WP_005616282.1;gbkey=CDS;gene=rppH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011848673.1;locus_tag=D1109_RS07680;product=RNA pyrophosphohydrolase;protein_id=WP_005616282.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1579666 1580433 . - . ID=gene-D1109_RS07685;Name=D1109_RS07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07685;old_locus_tag=D1109_07705 NZ_CP031858.1 Protein Homology CDS 1579666 1580433 . - 0 ID=cds-WP_005599605.1;Parent=gene-D1109_RS07685;Dbxref=Genbank:WP_005599605.1;Name=WP_005599605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618342.1;locus_tag=D1109_RS07685;product=M48 family metallopeptidase;protein_id=WP_005599605.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1580529 1581056 . - . ID=gene-D1109_RS07690;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=D1109_RS07690;old_locus_tag=D1109_07710 NZ_CP031858.1 Protein Homology CDS 1580529 1581056 . - 0 ID=cds-WP_005599607.1;Parent=gene-D1109_RS07690;Dbxref=Genbank:WP_005599607.1;Name=WP_005599607.1;Ontology_term=GO:0006796,GO:0004427;gbkey=CDS;gene=ppa;go_function=inorganic diphosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010944216.1;locus_tag=D1109_RS07690;product=inorganic diphosphatase;protein_id=WP_005599607.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1581130 1581840 . + . ID=gene-D1109_RS07695;Name=D1109_RS07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07695;old_locus_tag=D1109_07715 NZ_CP031858.1 Protein Homology CDS 1581130 1581840 . + 0 ID=cds-WP_005599610.1;Parent=gene-D1109_RS07695;Dbxref=Genbank:WP_005599610.1;Name=WP_005599610.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618344.1;locus_tag=D1109_RS07695;product=methyltransferase;protein_id=WP_005599610.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1581887 1582384 . - . ID=gene-D1109_RS07700;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=protein_coding;locus_tag=D1109_RS07700;old_locus_tag=D1109_07720 NZ_CP031858.1 Protein Homology CDS 1581887 1582384 . - 0 ID=cds-WP_237610966.1;Parent=gene-D1109_RS07700;Dbxref=Genbank:WP_237610966.1;Name=WP_237610966.1;Ontology_term=GO:0051252,GO:0008428;gbkey=CDS;gene=rraA;go_function=ribonuclease inhibitor activity|0008428||IEA;go_process=regulation of RNA metabolic process|0051252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014992278.1;locus_tag=D1109_RS07700;product=ribonuclease E activity regulator RraA;protein_id=WP_237610966.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1582603 1583397 . + . ID=gene-D1109_RS07705;Name=D1109_RS07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07705;old_locus_tag=D1109_07725 NZ_CP031858.1 Protein Homology CDS 1582603 1583397 . + 0 ID=cds-WP_005602786.1;Parent=gene-D1109_RS07705;Dbxref=Genbank:WP_005602786.1;Name=WP_005602786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599615.1;locus_tag=D1109_RS07705;product=formate/nitrite transporter family protein;protein_id=WP_005602786.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1583568 1584392 . + . ID=gene-D1109_RS07710;Name=D1109_RS07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07710;old_locus_tag=D1109_07730 NZ_CP031858.1 Protein Homology CDS 1583568 1584392 . + 0 ID=cds-WP_237610967.1;Parent=gene-D1109_RS07710;Dbxref=Genbank:WP_237610967.1;Name=WP_237610967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017357751.1;locus_tag=D1109_RS07710;product=alpha/beta hydrolase-fold protein;protein_id=WP_237610967.1;transl_table=11 NZ_CP031858.1 RefSeq pseudogene 1584541 1585750 . - . ID=gene-D1109_RS07715;Name=D1109_RS07715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D1109_RS07715;old_locus_tag=D1109_07735;pseudo=true NZ_CP031858.1 Protein Homology CDS 1584541 1585750 . - 0 ID=cds-D1109_RS07715;Parent=gene-D1109_RS07715;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612109.1;locus_tag=D1109_RS07715;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP031858.1 RefSeq gene 1585743 1586597 . - . ID=gene-D1109_RS07720;Name=D1109_RS07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07720;old_locus_tag=D1109_07740 NZ_CP031858.1 Protein Homology CDS 1585743 1586597 . - 0 ID=cds-WP_237601115.1;Parent=gene-D1109_RS07720;Dbxref=Genbank:WP_237601115.1;Name=WP_237601115.1;Ontology_term=GO:0006313;gbkey=CDS;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618583.1;locus_tag=D1109_RS07720;product=transposase;protein_id=WP_237601115.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1586856 1587998 . - . ID=gene-D1109_RS07725;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=D1109_RS07725;old_locus_tag=D1109_07745 NZ_CP031858.1 Protein Homology CDS 1586856 1587998 . - 0 ID=cds-WP_237610968.1;Parent=gene-D1109_RS07725;Dbxref=Genbank:WP_237610968.1;Name=WP_237610968.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010128968.1;locus_tag=D1109_RS07725;product=molecular chaperone DnaJ;protein_id=WP_237610968.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1588228 1590126 . - . ID=gene-D1109_RS07730;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=D1109_RS07730;old_locus_tag=D1109_07750 NZ_CP031858.1 Protein Homology CDS 1588228 1590126 . - 0 ID=cds-WP_237610969.1;Parent=gene-D1109_RS07730;Dbxref=Genbank:WP_237610969.1;Name=WP_237610969.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005670448.1;locus_tag=D1109_RS07730;product=molecular chaperone DnaK;protein_id=WP_237610969.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1590401 1591846 . - . ID=gene-D1109_RS07735;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=D1109_RS07735;old_locus_tag=D1109_07755 NZ_CP031858.1 Protein Homology CDS 1590401 1591846 . - 0 ID=cds-WP_009875183.1;Parent=gene-D1109_RS07735;Dbxref=Genbank:WP_009875183.1;Name=WP_009875183.1;Ontology_term=GO:0005997,GO:0042732,GO:0004856,GO:0005515;gbkey=CDS;gene=xylB;go_function=xylulokinase activity|0004856||IEA,protein binding|0005515||IEA;go_process=xylulose metabolic process|0005997||IEA,D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014992297.1;locus_tag=D1109_RS07735;product=xylulokinase;protein_id=WP_009875183.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1592044 1593363 . - . ID=gene-D1109_RS07740;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=D1109_RS07740;old_locus_tag=D1109_07760 NZ_CP031858.1 Protein Homology CDS 1592044 1593363 . - 0 ID=cds-WP_005599638.1;Parent=gene-D1109_RS07740;Dbxref=Genbank:WP_005599638.1;Name=WP_005599638.1;Ontology_term=GO:0006098,GO:0042732,GO:0000287,GO:0009045;gbkey=CDS;gene=xylA;go_function=magnesium ion binding|0000287||IEA,xylose isomerase activity|0009045||IEA;go_process=pentose-phosphate shunt|0006098||IEA,D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012072255.1;locus_tag=D1109_RS07740;product=xylose isomerase;protein_id=WP_005599638.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1593617 1594615 . + . ID=gene-D1109_RS07745;Name=xylF;gbkey=Gene;gene=xylF;gene_biotype=protein_coding;locus_tag=D1109_RS07745;old_locus_tag=D1109_07765 NZ_CP031858.1 Protein Homology CDS 1593617 1594615 . + 0 ID=cds-WP_005599640.1;Parent=gene-D1109_RS07745;Dbxref=Genbank:WP_005599640.1;Name=WP_005599640.1;Ontology_term=GO:0015753;gbkey=CDS;gene=xylF;go_process=D-xylose transmembrane transport|0015753||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005609381.1;locus_tag=D1109_RS07745;product=D-xylose ABC transporter substrate-binding protein;protein_id=WP_005599640.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1594679 1596193 . + . ID=gene-D1109_RS07750;Name=xylG;gbkey=Gene;gene=xylG;gene_biotype=protein_coding;locus_tag=D1109_RS07750;old_locus_tag=D1109_07770 NZ_CP031858.1 Protein Homology CDS 1594679 1596193 . + 0 ID=cds-WP_005599642.1;Parent=gene-D1109_RS07750;Dbxref=Genbank:WP_005599642.1;Name=WP_005599642.1;Ontology_term=GO:0015753,GO:0005524,GO:0015614,GO:0009898,GO:0055052;gbkey=CDS;gene=xylG;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-xylose transporter activity|0015614||IEA;go_process=D-xylose transmembrane transport|0015753||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011608742.1;locus_tag=D1109_RS07750;product=D-xylose ABC transporter ATP-binding protein;protein_id=WP_005599642.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1596197 1597324 . + . ID=gene-D1109_RS07755;Name=D1109_RS07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07755;old_locus_tag=D1109_07775 NZ_CP031858.1 Protein Homology CDS 1596197 1597324 . + 0 ID=cds-WP_009875182.1;Parent=gene-D1109_RS07755;Dbxref=Genbank:WP_009875182.1;Name=WP_009875182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005606005.1;locus_tag=D1109_RS07755;product=sugar ABC transporter permease;protein_id=WP_009875182.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1597449 1598630 . + . ID=gene-D1109_RS07760;Name=D1109_RS07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07760;old_locus_tag=D1109_07780 NZ_CP031858.1 Protein Homology CDS 1597449 1598630 . + 0 ID=cds-WP_005602801.1;Parent=gene-D1109_RS07760;Dbxref=Genbank:WP_005602801.1;Name=WP_005602801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599646.1;locus_tag=D1109_RS07760;product=DNA-binding transcriptional regulator;protein_id=WP_005602801.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1598635 1600662 . + . ID=gene-D1109_RS07765;Name=D1109_RS07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07765;old_locus_tag=D1109_07785 NZ_CP031858.1 Protein Homology CDS 1598635 1600662 . + 0 ID=cds-WP_005609384.1;Parent=gene-D1109_RS07765;Dbxref=Genbank:WP_005609384.1;Name=WP_005609384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599648.1;locus_tag=D1109_RS07765;product=M13 family metallopeptidase;protein_id=WP_005609384.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1600737 1600964 . + . ID=gene-D1109_RS07770;Name=D1109_RS07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07770;old_locus_tag=D1109_07790 NZ_CP031858.1 Protein Homology CDS 1600737 1600964 . + 0 ID=cds-WP_005599649.1;Parent=gene-D1109_RS07770;Dbxref=Genbank:WP_005599649.1;Name=WP_005599649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599649.1;locus_tag=D1109_RS07770;product=zinc-ribbon domain-containing protein;protein_id=WP_005599649.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1601033 1602457 . - . ID=gene-D1109_RS07775;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=D1109_RS07775;old_locus_tag=D1109_07795 NZ_CP031858.1 Protein Homology CDS 1601033 1602457 . - 0 ID=cds-WP_005599651.1;Parent=gene-D1109_RS07775;Dbxref=Genbank:WP_005599651.1;Name=WP_005599651.1;Ontology_term=GO:0015887,GO:0015937,GO:0015498;gbkey=CDS;gene=panF;go_function=pantothenate:sodium symporter activity|0015498||IEA;go_process=pantothenate transmembrane transport|0015887||IEA,coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618353.1;locus_tag=D1109_RS07775;product=sodium/pantothenate symporter;protein_id=WP_005599651.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1602465 1602689 . - . ID=gene-D1109_RS07780;Name=D1109_RS07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07780;old_locus_tag=D1109_07800 NZ_CP031858.1 Protein Homology CDS 1602465 1602689 . - 0 ID=cds-WP_005599653.1;Parent=gene-D1109_RS07780;Dbxref=Genbank:WP_005599653.1;Name=WP_005599653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599653.1;locus_tag=D1109_RS07780;product=DUF997 family protein;protein_id=WP_005599653.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1602741 1603058 . - . ID=gene-D1109_RS07785;Name=metJ;gbkey=Gene;gene=metJ;gene_biotype=protein_coding;locus_tag=D1109_RS07785;old_locus_tag=D1109_07805 NZ_CP031858.1 Protein Homology CDS 1602741 1603058 . - 0 ID=cds-WP_005599655.1;Parent=gene-D1109_RS07785;Dbxref=Genbank:WP_005599655.1;Name=WP_005599655.1;gbkey=CDS;gene=metJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014992209.1;locus_tag=D1109_RS07785;product=met regulon transcriptional regulator MetJ;protein_id=WP_005599655.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1603227 1603976 . + . ID=gene-D1109_RS07790;Name=D1109_RS07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07790;old_locus_tag=D1109_07810 NZ_CP031858.1 Protein Homology CDS 1603227 1603976 . + 0 ID=cds-WP_237610970.1;Parent=gene-D1109_RS07790;Dbxref=Genbank:WP_237610970.1;Name=WP_237610970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005613463.1;locus_tag=D1109_RS07790;product=VacJ family lipoprotein;protein_id=WP_237610970.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1604051 1604860 . + . ID=gene-D1109_RS07795;Name=D1109_RS07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07795;old_locus_tag=D1109_07815 NZ_CP031858.1 Protein Homology CDS 1604051 1604860 . + 0 ID=cds-WP_005599659.1;Parent=gene-D1109_RS07795;Dbxref=Genbank:WP_005599659.1;Name=WP_005599659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005613465.1;locus_tag=D1109_RS07795;product=D-hexose-6-phosphate mutarotase;protein_id=WP_005599659.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1604985 1606952 . + . ID=gene-D1109_RS07800;Name=D1109_RS07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07800;old_locus_tag=D1109_07820 NZ_CP031858.1 Protein Homology CDS 1604985 1606952 . + 0 ID=cds-WP_237610971.1;Parent=gene-D1109_RS07800;Dbxref=Genbank:WP_237610971.1;Name=WP_237610971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618587.1;locus_tag=D1109_RS07800;product=recombinase;protein_id=WP_237610971.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1607775 1610189 . + . ID=gene-D1109_RS07805;Name=pgaA;gbkey=Gene;gene=pgaA;gene_biotype=protein_coding;locus_tag=D1109_RS07805;old_locus_tag=D1109_07825 NZ_CP031858.1 Protein Homology CDS 1607775 1610189 . + 0 ID=cds-WP_237586001.1;Parent=gene-D1109_RS07805;Dbxref=Genbank:WP_237586001.1;Name=WP_237586001.1;Ontology_term=GO:0015774,GO:0042710,GO:0005215,GO:0045203;gbkey=CDS;gene=pgaA;go_component=integral component of cell outer membrane|0045203||IEA;go_function=transporter activity|0005215||IEA;go_process=polysaccharide transport|0015774||IEA,biofilm formation|0042710||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618589.1;locus_tag=D1109_RS07805;product=poly-beta-1%2C6 N-acetyl-D-glucosamine export porin PgaA;protein_id=WP_237586001.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1610204 1611976 . + . ID=gene-D1109_RS07810;Name=pgaB;gbkey=Gene;gene=pgaB;gene_biotype=protein_coding;locus_tag=D1109_RS07810;old_locus_tag=D1109_07830 NZ_CP031858.1 Protein Homology CDS 1610204 1611976 . + 0 ID=cds-WP_005616312.1;Parent=gene-D1109_RS07810;Dbxref=Genbank:WP_005616312.1;Name=WP_005616312.1;Ontology_term=GO:0045226,GO:0019213;gbkey=CDS;gene=pgaB;go_function=deacetylase activity|0019213||IEA;go_process=extracellular polysaccharide biosynthetic process|0045226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618355.1;locus_tag=D1109_RS07810;product=poly-beta-1%2C6-N-acetyl-D-glucosamine N-deacetylase PgaB;protein_id=WP_005616312.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1611985 1613220 . + . ID=gene-D1109_RS07815;Name=pgaC;gbkey=Gene;gene=pgaC;gene_biotype=protein_coding;locus_tag=D1109_RS07815;old_locus_tag=D1109_07835 NZ_CP031858.1 Protein Homology CDS 1611985 1613220 . + 0 ID=cds-WP_005602811.1;Parent=gene-D1109_RS07815;Dbxref=Genbank:WP_005602811.1;Name=WP_005602811.1;Ontology_term=GO:0042710,GO:0008375;gbkey=CDS;gene=pgaC;go_function=acetylglucosaminyltransferase activity|0008375||IEA;go_process=biofilm formation|0042710||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875177.1;locus_tag=D1109_RS07815;product=poly-beta-1%2C6-N-acetyl-D-glucosamine synthase;protein_id=WP_005602811.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1613222 1613506 . + . ID=gene-D1109_RS07820;Name=D1109_RS07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07820;old_locus_tag=D1109_07840 NZ_CP031858.1 Protein Homology CDS 1613222 1613506 . + 0 ID=cds-WP_005599669.1;Parent=gene-D1109_RS07820;Dbxref=Genbank:WP_005599669.1;Name=WP_005599669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005616313.1;locus_tag=D1109_RS07820;product=hypothetical protein;protein_id=WP_005599669.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1613610 1614380 . - . ID=gene-D1109_RS07825;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=D1109_RS07825;old_locus_tag=D1109_07845 NZ_CP031858.1 Protein Homology CDS 1613610 1614380 . - 0 ID=cds-WP_005599672.1;Parent=gene-D1109_RS07825;Dbxref=Genbank:WP_005599672.1;Name=WP_005599672.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005622118.1;locus_tag=D1109_RS07825;product=triose-phosphate isomerase;protein_id=WP_005599672.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1614655 1615668 . + . ID=gene-D1109_RS07830;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;locus_tag=D1109_RS07830;old_locus_tag=D1109_07850 NZ_CP031858.1 Protein Homology CDS 1614655 1615668 . + 0 ID=cds-WP_005620297.1;Parent=gene-D1109_RS07830;Dbxref=Genbank:WP_005620297.1;Name=WP_005620297.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=truD;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018650801.1;locus_tag=D1109_RS07830;product=tRNA pseudouridine(13) synthase TruD;protein_id=WP_005620297.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1615668 1616432 . + . ID=gene-D1109_RS07835;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=D1109_RS07835;old_locus_tag=D1109_07855 NZ_CP031858.1 Protein Homology CDS 1615668 1616432 . + 0 ID=cds-WP_005599676.1;Parent=gene-D1109_RS07835;Dbxref=Genbank:WP_005599676.1;Name=WP_005599676.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599676.1;locus_tag=D1109_RS07835;product=5'/3'-nucleotidase SurE;protein_id=WP_005599676.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1616432 1617016 . + . ID=gene-D1109_RS07840;Name=D1109_RS07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07840;old_locus_tag=D1109_07860 NZ_CP031858.1 Protein Homology CDS 1616432 1617016 . + 0 ID=cds-WP_237610972.1;Parent=gene-D1109_RS07840;Dbxref=Genbank:WP_237610972.1;Name=WP_237610972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599677.1;locus_tag=D1109_RS07840;product=DedA family protein;protein_id=WP_237610972.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1617022 1617603 . + . ID=gene-D1109_RS07845;Name=D1109_RS07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07845;old_locus_tag=D1109_07865 NZ_CP031858.1 Protein Homology CDS 1617022 1617603 . + 0 ID=cds-WP_005599678.1;Parent=gene-D1109_RS07845;Dbxref=Genbank:WP_005599678.1;Name=WP_005599678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618372.1;locus_tag=D1109_RS07845;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WP_005599678.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1617689 1617886 . + . ID=gene-D1109_RS07850;Name=D1109_RS07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07850;old_locus_tag=D1109_07870 NZ_CP031858.1 Protein Homology CDS 1617689 1617886 . + 0 ID=cds-WP_005599679.1;Parent=gene-D1109_RS07850;Dbxref=Genbank:WP_005599679.1;Name=WP_005599679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599679.1;locus_tag=D1109_RS07850;product=hypothetical protein;protein_id=WP_005599679.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1617920 1619158 . + . ID=gene-D1109_RS07855;Name=D1109_RS07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07855;old_locus_tag=D1109_07875 NZ_CP031858.1 Protein Homology CDS 1617920 1619158 . + 0 ID=cds-WP_005618375.1;Parent=gene-D1109_RS07855;Dbxref=Genbank:WP_005618375.1;Name=WP_005618375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874873.1;locus_tag=D1109_RS07855;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_005618375.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1619247 1619810 . + . ID=gene-D1109_RS07860;Name=D1109_RS07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07860;old_locus_tag=D1109_07880 NZ_CP031858.1 Protein Homology CDS 1619247 1619810 . + 0 ID=cds-WP_005606027.1;Parent=gene-D1109_RS07860;Dbxref=Genbank:WP_005606027.1;Name=WP_005606027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005606027.1;locus_tag=D1109_RS07860;product=DNA-3-methyladenine glycosylase I;protein_id=WP_005606027.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1619862 1620989 . - . ID=gene-D1109_RS07865;Name=D1109_RS07865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07865;old_locus_tag=D1109_07885 NZ_CP031858.1 Protein Homology CDS 1619862 1620989 . - 0 ID=cds-WP_005599687.1;Parent=gene-D1109_RS07865;Dbxref=Genbank:WP_005599687.1;Name=WP_005599687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599687.1;locus_tag=D1109_RS07865;product=M20/M25/M40 family metallo-hydrolase;protein_id=WP_005599687.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1621003 1621467 . - . ID=gene-D1109_RS07870;Name=D1109_RS07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07870;old_locus_tag=D1109_07890 NZ_CP031858.1 Protein Homology CDS 1621003 1621467 . - 0 ID=cds-WP_005599688.1;Parent=gene-D1109_RS07870;Dbxref=Genbank:WP_005599688.1;Name=WP_005599688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618382.1;locus_tag=D1109_RS07870;product=YjiG family protein;protein_id=WP_005599688.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1621464 1622102 . - . ID=gene-D1109_RS07875;Name=D1109_RS07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07875;old_locus_tag=D1109_07895 NZ_CP031858.1 Protein Homology CDS 1621464 1622102 . - 0 ID=cds-WP_237610973.1;Parent=gene-D1109_RS07875;Dbxref=Genbank:WP_237610973.1;Name=WP_237610973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263455.1;locus_tag=D1109_RS07875;product=hypothetical protein;protein_id=WP_237610973.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1622280 1623239 . - . ID=gene-D1109_RS07880;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=D1109_RS07880;old_locus_tag=D1109_07900 NZ_CP031858.1 Protein Homology CDS 1622280 1623239 . - 0 ID=cds-WP_005602827.1;Parent=gene-D1109_RS07880;Dbxref=Genbank:WP_005602827.1;Name=WP_005602827.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874869.1;locus_tag=D1109_RS07880;product=ferrochelatase;protein_id=WP_005602827.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1623515 1623649 . + . ID=gene-D1109_RS07885;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=D1109_RS07885;old_locus_tag=D1109_07905 NZ_CP031858.1 Protein Homology CDS 1623515 1623649 . + 0 ID=cds-WP_005599701.1;Parent=gene-D1109_RS07885;Dbxref=Genbank:WP_005599701.1;Name=WP_005599701.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011508608.1;locus_tag=D1109_RS07885;product=50S ribosomal protein L34;protein_id=WP_005599701.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1623682 1624047 . + . ID=gene-D1109_RS07890;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=D1109_RS07890;old_locus_tag=D1109_07910 NZ_CP031858.1 Protein Homology CDS 1623682 1624047 . + 0 ID=cds-WP_080517101.1;Parent=gene-D1109_RS07890;Dbxref=Genbank:WP_080517101.1;Name=WP_080517101.1;Ontology_term=GO:0006396,GO:0004526;gbkey=CDS;gene=rnpA;go_function=ribonuclease P activity|0004526||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010944714.1;locus_tag=D1109_RS07890;product=ribonuclease P protein component;protein_id=WP_080517101.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1624005 1624310 . + . ID=gene-D1109_RS07895;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=D1109_RS07895;old_locus_tag=D1109_07915 NZ_CP031858.1 Protein Homology CDS 1624005 1624310 . + 0 ID=cds-WP_005618389.1;Parent=gene-D1109_RS07895;Dbxref=Genbank:WP_005618389.1;Name=WP_005618389.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005602831.1;locus_tag=D1109_RS07895;product=membrane protein insertion efficiency factor YidD;protein_id=WP_005618389.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1624361 1625776 . - . ID=gene-D1109_RS07900;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=D1109_RS07900;old_locus_tag=D1109_07920 NZ_CP031858.1 Protein Homology CDS 1624361 1625776 . - 0 ID=cds-WP_005599706.1;Parent=gene-D1109_RS07900;Dbxref=Genbank:WP_005599706.1;Name=WP_005599706.1;Ontology_term=GO:0006542,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamate-ammonia ligase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018650813.1;locus_tag=D1109_RS07900;product=type I glutamate--ammonia ligase;protein_id=WP_005599706.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1626134 1626961 . - . ID=gene-D1109_RS07905;Name=cpdA;gbkey=Gene;gene=cpdA;gene_biotype=protein_coding;locus_tag=D1109_RS07905;old_locus_tag=D1109_07925 NZ_CP031858.1 Protein Homology CDS 1626134 1626961 . - 0 ID=cds-WP_005616325.1;Parent=gene-D1109_RS07905;Dbxref=Genbank:WP_005616325.1;Name=WP_005616325.1;Ontology_term=GO:0004115;gbkey=CDS;gene=cpdA;go_function=3'%2C5'-cyclic-AMP phosphodiesterase activity|0004115||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599708.1;locus_tag=D1109_RS07905;product=3'%2C5'-cyclic-AMP phosphodiesterase;protein_id=WP_005616325.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1627168 1627791 . - . ID=gene-D1109_RS07910;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=D1109_RS07910;old_locus_tag=D1109_07930 NZ_CP031858.1 Protein Homology CDS 1627168 1627791 . - 0 ID=cds-WP_005599710.1;Parent=gene-D1109_RS07910;Dbxref=Genbank:WP_005599710.1;Name=WP_005599710.1;Ontology_term=GO:0046872;gbkey=CDS;gene=nudF;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005602835.1;locus_tag=D1109_RS07910;product=ADP-ribose diphosphatase;protein_id=WP_005599710.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1627801 1628220 . - . ID=gene-D1109_RS07915;Name=psiE;gbkey=Gene;gene=psiE;gene_biotype=protein_coding;locus_tag=D1109_RS07915;old_locus_tag=D1109_07935 NZ_CP031858.1 Protein Homology CDS 1627801 1628220 . - 0 ID=cds-WP_005602837.1;Parent=gene-D1109_RS07915;Dbxref=Genbank:WP_005602837.1;Name=WP_005602837.1;gbkey=CDS;gene=psiE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599712.1;locus_tag=D1109_RS07915;product=phosphate-starvation-inducible protein PsiE;protein_id=WP_005602837.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1628213 1628941 . - . ID=gene-D1109_RS07920;Name=D1109_RS07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07920;old_locus_tag=D1109_07940 NZ_CP031858.1 Protein Homology CDS 1628213 1628941 . - 0 ID=cds-WP_005613474.1;Parent=gene-D1109_RS07920;Dbxref=Genbank:WP_005613474.1;Name=WP_005613474.1;Ontology_term=GO:0008897;gbkey=CDS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005606039.1;locus_tag=D1109_RS07920;product=4'-phosphopantetheinyl transferase superfamily protein;protein_id=WP_005613474.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1629001 1629429 . - . ID=gene-D1109_RS07925;Name=D1109_RS07925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07925;old_locus_tag=D1109_07945 NZ_CP031858.1 Protein Homology CDS 1629001 1629429 . - 0 ID=cds-WP_005606040.1;Parent=gene-D1109_RS07925;Dbxref=Genbank:WP_005606040.1;Name=WP_005606040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014992182.1;locus_tag=D1109_RS07925;product=EamA family transporter;protein_id=WP_005606040.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1629605 1630789 . + . ID=gene-D1109_RS07930;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=D1109_RS07930;old_locus_tag=D1109_07950 NZ_CP031858.1 Protein Homology CDS 1629605 1630789 . + 0 ID=cds-WP_005602843.1;Parent=gene-D1109_RS07930;Dbxref=Genbank:WP_005602843.1;Name=WP_005602843.1;Ontology_term=GO:0006814,GO:1902600,GO:0015385;gbkey=CDS;gene=nhaA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005613475.1;locus_tag=D1109_RS07930;product=Na+/H+ antiporter NhaA;protein_id=WP_005602843.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1630932 1631420 . + . ID=gene-D1109_RS07935;Name=D1109_RS07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07935;old_locus_tag=D1109_07955 NZ_CP031858.1 Protein Homology CDS 1630932 1631420 . + 0 ID=cds-WP_005618600.1;Parent=gene-D1109_RS07935;Dbxref=Genbank:WP_005618600.1;Name=WP_005618600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618600.1;locus_tag=D1109_RS07935;product=ricin-type beta-trefoil lectin domain protein;protein_id=WP_005618600.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1631456 1631890 . - . ID=gene-D1109_RS07940;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=D1109_RS07940;old_locus_tag=D1109_07960 NZ_CP031858.1 Protein Homology CDS 1631456 1631890 . - 0 ID=cds-WP_005602846.1;Parent=gene-D1109_RS07940;Dbxref=Genbank:WP_005602846.1;Name=WP_005602846.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005602846.1;locus_tag=D1109_RS07940;product=D-aminoacyl-tRNA deacylase;protein_id=WP_005602846.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1631887 1632717 . - . ID=gene-D1109_RS07945;Name=D1109_RS07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07945;old_locus_tag=D1109_07965 NZ_CP031858.1 Protein Homology CDS 1631887 1632717 . - 0 ID=cds-WP_005602848.1;Parent=gene-D1109_RS07945;Dbxref=Genbank:WP_005602848.1;Name=WP_005602848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005602848.1;locus_tag=D1109_RS07945;product=virulence factor BrkB family protein;protein_id=WP_005602848.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1632735 1633973 . - . ID=gene-D1109_RS07950;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=D1109_RS07950;old_locus_tag=D1109_07970 NZ_CP031858.1 Protein Homology CDS 1632735 1633973 . - 0 ID=cds-WP_237610974.1;Parent=gene-D1109_RS07950;Dbxref=Genbank:WP_237610974.1;Name=WP_237610974.1;Ontology_term=GO:0006561,GO:0004350;gbkey=CDS;gene=proA;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005609407.1;locus_tag=D1109_RS07950;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_237610974.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1634203 1634550 . + . ID=gene-D1109_RS07955;Name=D1109_RS07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07955 NZ_CP031858.1 Protein Homology CDS 1634203 1634550 . + 0 ID=cds-WP_005620311.1;Parent=gene-D1109_RS07955;Dbxref=Genbank:WP_005620311.1;Name=WP_005620311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618602.1;locus_tag=D1109_RS07955;product=TonB-dependent receptor plug domain-containing protein;protein_id=WP_005620311.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1634519 1635052 . + . ID=gene-D1109_RS07960;Name=D1109_RS07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07960 NZ_CP031858.1 Protein Homology CDS 1634519 1635052 . + 0 ID=cds-WP_005620313.1;Parent=gene-D1109_RS07960;Dbxref=Genbank:WP_005620313.1;Name=WP_005620313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005620313.1;locus_tag=D1109_RS07960;product=hypothetical protein;protein_id=WP_005620313.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1635146 1636402 . + . ID=gene-D1109_RS07965;Name=D1109_RS07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07965 NZ_CP031858.1 Protein Homology CDS 1635146 1636402 . + 0 ID=cds-WP_005602851.1;Parent=gene-D1109_RS07965;Dbxref=Genbank:WP_005602851.1;Name=WP_005602851.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012801.2;locus_tag=D1109_RS07965;product=TonB-dependent receptor;protein_id=WP_005602851.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1636656 1637510 . - . ID=gene-D1109_RS07970;Name=D1109_RS07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07970;old_locus_tag=D1109_07980 NZ_CP031858.1 Protein Homology CDS 1636656 1637510 . - 0 ID=cds-WP_005599729.1;Parent=gene-D1109_RS07970;Dbxref=Genbank:WP_005599729.1;Name=WP_005599729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618405.1;locus_tag=D1109_RS07970;product=transferrin-binding protein-like solute binding protein;protein_id=WP_005599729.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1637630 1638874 . - . ID=gene-D1109_RS07975;Name=D1109_RS07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS07975;old_locus_tag=D1109_07985 NZ_CP031858.1 Protein Homology CDS 1637630 1638874 . - 0 ID=cds-WP_237610975.1;Parent=gene-D1109_RS07975;Dbxref=Genbank:WP_237610975.1;Name=WP_237610975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005609409.1;locus_tag=D1109_RS07975;product=transferrin-binding protein-like solute binding protein;protein_id=WP_237610975.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1639188 1641056 . + . ID=gene-D1109_RS07980;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=D1109_RS07980;old_locus_tag=D1109_07990 NZ_CP031858.1 Protein Homology CDS 1639188 1641056 . + 0 ID=cds-WP_005602857.1;Parent=gene-D1109_RS07980;Dbxref=Genbank:WP_005602857.1;Name=WP_005602857.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017357676.1;locus_tag=D1109_RS07980;product=DNA mismatch repair endonuclease MutL;protein_id=WP_005602857.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1641258 1642313 . + . ID=gene-D1109_RS07985;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=D1109_RS07985;old_locus_tag=D1109_07995 NZ_CP031858.1 Protein Homology CDS 1641258 1642313 . + 0 ID=cds-WP_237610976.1;Parent=gene-D1109_RS07985;Dbxref=Genbank:WP_237610976.1;Name=WP_237610976.1;gbkey=CDS;gene=adhP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005602862.1;locus_tag=D1109_RS07985;product=alcohol dehydrogenase AdhP;protein_id=WP_237610976.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1642445 1643389 . + . ID=gene-D1109_RS07990;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=D1109_RS07990;old_locus_tag=D1109_08000 NZ_CP031858.1 Protein Homology CDS 1642445 1643389 . + 0 ID=cds-WP_237610977.1;Parent=gene-D1109_RS07990;Dbxref=Genbank:WP_237610977.1;Name=WP_237610977.1;Ontology_term=GO:0006400,GO:0052381;gbkey=CDS;gene=miaA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618608.1;locus_tag=D1109_RS07990;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_237610977.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1643454 1643732 . + . ID=gene-D1109_RS07995;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=D1109_RS07995;old_locus_tag=D1109_08005 NZ_CP031858.1 Protein Homology CDS 1643454 1643732 . + 0 ID=cds-WP_005599741.1;Parent=gene-D1109_RS07995;Dbxref=Genbank:WP_005599741.1;Name=WP_005599741.1;Ontology_term=GO:0006355;gbkey=CDS;gene=hfq;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005616337.1;locus_tag=D1109_RS07995;product=RNA chaperone Hfq;protein_id=WP_005599741.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1643914 1645137 . + . ID=gene-D1109_RS08000;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=D1109_RS08000;old_locus_tag=D1109_08010 NZ_CP031858.1 Protein Homology CDS 1643914 1645137 . + 0 ID=cds-WP_237610978.1;Parent=gene-D1109_RS08000;Dbxref=Genbank:WP_237610978.1;Name=WP_237610978.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618410.1;locus_tag=D1109_RS08000;product=GTPase HflX;protein_id=WP_237610978.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1645173 1645733 . - . ID=gene-D1109_RS08005;Name=D1109_RS08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08005;old_locus_tag=D1109_08015 NZ_CP031858.1 Protein Homology CDS 1645173 1645733 . - 0 ID=cds-WP_237610979.1;Parent=gene-D1109_RS08005;Dbxref=Genbank:WP_237610979.1;Name=WP_237610979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005616339.1;locus_tag=D1109_RS08005;product=TIGR00730 family Rossman fold protein;protein_id=WP_237610979.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1645796 1646119 . + . ID=gene-D1109_RS08010;Name=D1109_RS08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08010;old_locus_tag=D1109_08020 NZ_CP031858.1 Protein Homology CDS 1645796 1646119 . + 0 ID=cds-WP_012263466.1;Parent=gene-D1109_RS08010;Dbxref=Genbank:WP_012263466.1;Name=WP_012263466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014992168.1;locus_tag=D1109_RS08010;product=MazG-like family protein;protein_id=WP_012263466.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1646168 1646842 . - . ID=gene-D1109_RS08015;Name=crp;gbkey=Gene;gene=crp;gene_biotype=protein_coding;locus_tag=D1109_RS08015;old_locus_tag=D1109_08025 NZ_CP031858.1 Protein Homology CDS 1646168 1646842 . - 0 ID=cds-WP_005599747.1;Parent=gene-D1109_RS08015;Dbxref=Genbank:WP_005599747.1;Name=WP_005599747.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=crp;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010787261.1;locus_tag=D1109_RS08015;product=cAMP-activated global transcriptional regulator CRP;protein_id=WP_005599747.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1646920 1647138 . - . ID=gene-D1109_RS08020;Name=D1109_RS08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08020;old_locus_tag=D1109_08030 NZ_CP031858.1 Protein Homology CDS 1646920 1647138 . - 0 ID=cds-WP_005599748.1;Parent=gene-D1109_RS08020;Dbxref=Genbank:WP_005599748.1;Name=WP_005599748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018650836.1;locus_tag=D1109_RS08020;product=YheU family protein;protein_id=WP_005599748.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1647144 1647752 . - . ID=gene-D1109_RS08025;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;locus_tag=D1109_RS08025;old_locus_tag=D1109_08035 NZ_CP031858.1 Protein Homology CDS 1647144 1647752 . - 0 ID=cds-WP_005620316.1;Parent=gene-D1109_RS08025;Dbxref=Genbank:WP_005620316.1;Name=WP_005620316.1;Ontology_term=GO:0010974,GO:0003677;gbkey=CDS;gene=slmA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of division septum assembly|0010974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005624468.1;locus_tag=D1109_RS08025;product=nucleoid occlusion factor SlmA;protein_id=WP_005620316.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1647858 1648313 . - . ID=gene-D1109_RS08030;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=D1109_RS08030;old_locus_tag=D1109_08040 NZ_CP031858.1 Protein Homology CDS 1647858 1648313 . - 0 ID=cds-WP_005599752.1;Parent=gene-D1109_RS08030;Dbxref=Genbank:WP_005599752.1;Name=WP_005599752.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014550997.1;locus_tag=D1109_RS08030;product=dUTP diphosphatase;protein_id=WP_005599752.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1648322 1649527 . - . ID=gene-D1109_RS08035;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=D1109_RS08035;old_locus_tag=D1109_08045 NZ_CP031858.1 Protein Homology CDS 1648322 1649527 . - 0 ID=cds-WP_237610980.1;Parent=gene-D1109_RS08035;Dbxref=Genbank:WP_237610980.1;Name=WP_237610980.1;Ontology_term=GO:0015937,GO:0015939,GO:0004632,GO:0004633;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate metabolic process|0015939||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005602882.1;locus_tag=D1109_RS08035;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_237610980.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1649734 1650396 . + . ID=gene-D1109_RS08040;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=D1109_RS08040;old_locus_tag=D1109_08050 NZ_CP031858.1 Protein Homology CDS 1649734 1650396 . + 0 ID=cds-WP_005599756.1;Parent=gene-D1109_RS08040;Dbxref=Genbank:WP_005599756.1;Name=WP_005599756.1;Ontology_term=GO:0006281,GO:0003677;gbkey=CDS;gene=radC;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599756.1;locus_tag=D1109_RS08040;product=DNA repair protein RadC;protein_id=WP_005599756.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1650565 1650801 . + . ID=gene-D1109_RS08045;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=D1109_RS08045;old_locus_tag=D1109_08055 NZ_CP031858.1 Protein Homology CDS 1650565 1650801 . + 0 ID=cds-WP_005599762.1;Parent=gene-D1109_RS08045;Dbxref=Genbank:WP_005599762.1;Name=WP_005599762.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rpmB;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018677334.1;locus_tag=D1109_RS08045;product=50S ribosomal protein L28;protein_id=WP_005599762.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1650813 1650983 . + . ID=gene-D1109_RS08050;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=D1109_RS08050;old_locus_tag=D1109_08060 NZ_CP031858.1 Protein Homology CDS 1650813 1650983 . + 0 ID=cds-WP_005599764.1;Parent=gene-D1109_RS08050;Dbxref=Genbank:WP_005599764.1;Name=WP_005599764.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmG;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005624479.1;locus_tag=D1109_RS08050;product=50S ribosomal protein L33;protein_id=WP_005599764.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1651348 1651908 . + . ID=gene-D1109_RS08055;Name=D1109_RS08055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08055;old_locus_tag=D1109_08070 NZ_CP031858.1 Protein Homology CDS 1651348 1651908 . + 0 ID=cds-WP_005599767.1;Parent=gene-D1109_RS08055;Dbxref=Genbank:WP_005599767.1;Name=WP_005599767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599767.1;locus_tag=D1109_RS08055;product=hypothetical protein;protein_id=WP_005599767.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1652189 1653553 . + . ID=gene-D1109_RS08060;Name=D1109_RS08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08060;old_locus_tag=D1109_08075 NZ_CP031858.1 Protein Homology CDS 1652189 1653553 . + 0 ID=cds-WP_005599768.1;Parent=gene-D1109_RS08060;Dbxref=Genbank:WP_005599768.1;Name=WP_005599768.1;Ontology_term=GO:0009058,GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005820549.1;locus_tag=D1109_RS08060;product=diaminobutyrate--2-oxoglutarate transaminase;protein_id=WP_005599768.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1653682 1655217 . + . ID=gene-D1109_RS08065;Name=ddc;gbkey=Gene;gene=ddc;gene_biotype=protein_coding;locus_tag=D1109_RS08065;old_locus_tag=D1109_08080 NZ_CP031858.1 Protein Homology CDS 1653682 1655217 . + 0 ID=cds-WP_009874861.1;Parent=gene-D1109_RS08065;Dbxref=Genbank:WP_009874861.1;Name=WP_009874861.1;gbkey=CDS;gene=ddc;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005693296.1;locus_tag=D1109_RS08065;product=L-2%2C4-diaminobutyrate decarboxylase;protein_id=WP_009874861.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1655276 1655545 . - . ID=gene-D1109_RS08070;Name=yedF;gbkey=Gene;gene=yedF;gene_biotype=protein_coding;locus_tag=D1109_RS08070;old_locus_tag=D1109_08085 NZ_CP031858.1 Protein Homology CDS 1655276 1655545 . - 0 ID=cds-WP_005599772.1;Parent=gene-D1109_RS08070;Dbxref=Genbank:WP_005599772.1;Name=WP_005599772.1;gbkey=CDS;gene=yedF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007241376.1;locus_tag=D1109_RS08070;product=sulfurtransferase-like selenium metabolism protein YedF;protein_id=WP_005599772.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1655563 1656783 . - . ID=gene-D1109_RS08075;Name=yedE;gbkey=Gene;gene=yedE;gene_biotype=protein_coding;locus_tag=D1109_RS08075;old_locus_tag=D1109_08090 NZ_CP031858.1 Protein Homology CDS 1655563 1656783 . - 0 ID=cds-WP_005602889.1;Parent=gene-D1109_RS08075;Dbxref=Genbank:WP_005602889.1;Name=WP_005602889.1;gbkey=CDS;gene=yedE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599775.1;locus_tag=D1109_RS08075;product=selenium metabolism membrane protein YedE/FdhT;protein_id=WP_005602889.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1657079 1657411 . + . ID=gene-D1109_RS08080;Name=D1109_RS08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08080;old_locus_tag=D1109_08095 NZ_CP031858.1 Protein Homology CDS 1657079 1657411 . + 0 ID=cds-WP_005599777.1;Parent=gene-D1109_RS08080;Dbxref=Genbank:WP_005599777.1;Name=WP_005599777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018650843.1;locus_tag=D1109_RS08080;product=DUF413 domain-containing protein;protein_id=WP_005599777.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1657574 1658680 . + . ID=gene-D1109_RS08085;Name=trmA;gbkey=Gene;gene=trmA;gene_biotype=protein_coding;locus_tag=D1109_RS08085;old_locus_tag=D1109_08100 NZ_CP031858.1 Protein Homology CDS 1657574 1658680 . + 0 ID=cds-WP_237610981.1;Parent=gene-D1109_RS08085;Dbxref=Genbank:WP_237610981.1;Name=WP_237610981.1;Ontology_term=GO:0006400,GO:0030697;gbkey=CDS;gene=trmA;go_function=S-adenosylmethionine-dependent tRNA (m5U54) methyltransferase activity|0030697||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011848685.1;locus_tag=D1109_RS08085;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;protein_id=WP_237610981.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1658786 1658875 . + . ID=gene-D1109_RS08090;Name=D1109_RS08090;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS08090;old_locus_tag=D1109_08105 NZ_CP031858.1 tRNAscan-SE tRNA 1658786 1658875 . + . ID=rna-D1109_RS08090;Parent=gene-D1109_RS08090;anticodon=(pos:1658820..1658822);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS08090;product=tRNA-Ser NZ_CP031858.1 tRNAscan-SE exon 1658786 1658875 . + . ID=exon-D1109_RS08090-1;Parent=rna-D1109_RS08090;anticodon=(pos:1658820..1658822);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS08090;product=tRNA-Ser NZ_CP031858.1 RefSeq gene 1658959 1659048 . + . ID=gene-D1109_RS08095;Name=D1109_RS08095;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS08095;old_locus_tag=D1109_08110 NZ_CP031858.1 tRNAscan-SE tRNA 1658959 1659048 . + . ID=rna-D1109_RS08095;Parent=gene-D1109_RS08095;anticodon=(pos:1658993..1658995);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS08095;product=tRNA-Ser NZ_CP031858.1 tRNAscan-SE exon 1658959 1659048 . + . ID=exon-D1109_RS08095-1;Parent=rna-D1109_RS08095;anticodon=(pos:1658993..1658995);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS08095;product=tRNA-Ser NZ_CP031858.1 RefSeq gene 1659180 1660133 . - . ID=gene-D1109_RS08100;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=D1109_RS08100;old_locus_tag=D1109_08115 NZ_CP031858.1 Protein Homology CDS 1659180 1660133 . - 0 ID=cds-WP_005599781.1;Parent=gene-D1109_RS08100;Dbxref=Genbank:WP_005599781.1;Name=WP_005599781.1;gbkey=CDS;gene=corA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011199502.1;locus_tag=D1109_RS08100;product=magnesium/cobalt transporter CorA;protein_id=WP_005599781.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1660434 1661210 . + . ID=gene-D1109_RS08105;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=D1109_RS08105;old_locus_tag=D1109_08120 NZ_CP031858.1 Protein Homology CDS 1660434 1661210 . + 0 ID=cds-WP_005599783.1;Parent=gene-D1109_RS08105;Dbxref=Genbank:WP_005599783.1;Name=WP_005599783.1;Ontology_term=GO:0008168;gbkey=CDS;gene=ubiE;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599783.1;locus_tag=D1109_RS08105;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=WP_005599783.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1661236 1661868 . + . ID=gene-D1109_RS08110;Name=D1109_RS08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08110;old_locus_tag=D1109_08125 NZ_CP031858.1 Protein Homology CDS 1661236 1661868 . + 0 ID=cds-WP_237610982.1;Parent=gene-D1109_RS08110;Dbxref=Genbank:WP_237610982.1;Name=WP_237610982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005616349.1;locus_tag=D1109_RS08110;product=SCP2 sterol-binding domain-containing protein;protein_id=WP_237610982.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1661865 1663499 . + . ID=gene-D1109_RS08115;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=D1109_RS08115;old_locus_tag=D1109_08130 NZ_CP031858.1 Protein Homology CDS 1661865 1663499 . + 0 ID=cds-WP_005602896.1;Parent=gene-D1109_RS08115;Dbxref=Genbank:WP_005602896.1;Name=WP_005602896.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiB;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005602896.1;locus_tag=D1109_RS08115;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=WP_005602896.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1663591 1663821 . + . ID=gene-D1109_RS08120;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=D1109_RS08120;old_locus_tag=D1109_08135 NZ_CP031858.1 Protein Homology CDS 1663591 1663821 . + 0 ID=cds-WP_005599788.1;Parent=gene-D1109_RS08120;Dbxref=Genbank:WP_005599788.1;Name=WP_005599788.1;gbkey=CDS;gene=tatA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011199679.1;locus_tag=D1109_RS08120;product=Sec-independent protein translocase subunit TatA;protein_id=WP_005599788.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1663825 1664412 . + . ID=gene-D1109_RS08125;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=D1109_RS08125;old_locus_tag=D1109_08140 NZ_CP031858.1 Protein Homology CDS 1663825 1664412 . + 0 ID=cds-WP_005613515.1;Parent=gene-D1109_RS08125;Dbxref=Genbank:WP_005613515.1;Name=WP_005613515.1;Ontology_term=GO:0015031,GO:0015628;gbkey=CDS;gene=tatB;go_process=protein transport|0015031||IEA,protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005602897.1;locus_tag=D1109_RS08125;product=Sec-independent protein translocase protein TatB;protein_id=WP_005613515.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1664402 1665148 . + . ID=gene-D1109_RS08130;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=D1109_RS08130;old_locus_tag=D1109_08145 NZ_CP031858.1 Protein Homology CDS 1664402 1665148 . + 0 ID=cds-WP_009874641.1;Parent=gene-D1109_RS08130;Dbxref=Genbank:WP_009874641.1;Name=WP_009874641.1;Ontology_term=GO:0015628,GO:0005887;gbkey=CDS;gene=tatC;go_component=integral component of plasma membrane|0005887||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599792.1;locus_tag=D1109_RS08130;product=twin-arginine translocase subunit TatC;protein_id=WP_009874641.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1665208 1666227 . + . ID=gene-D1109_RS08135;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=D1109_RS08135;old_locus_tag=D1109_08150 NZ_CP031858.1 Protein Homology CDS 1665208 1666227 . + 0 ID=cds-WP_005618618.1;Parent=gene-D1109_RS08135;Dbxref=Genbank:WP_005618618.1;Name=WP_005618618.1;Ontology_term=GO:0033014,GO:0003824,GO:0004655,GO:0046872;gbkey=CDS;gene=hemB;go_function=catalytic activity|0003824||IEA,porphobilinogen synthase activity|0004655||IEA,metal ion binding|0046872||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005610917.1;locus_tag=D1109_RS08135;product=porphobilinogen synthase;protein_id=WP_005618618.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1666314 1666676 . + . ID=gene-D1109_RS08140;Name=D1109_RS08140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08140;old_locus_tag=D1109_08155 NZ_CP031858.1 Protein Homology CDS 1666314 1666676 . + 0 ID=cds-WP_005618620.1;Parent=gene-D1109_RS08140;Dbxref=Genbank:WP_005618620.1;Name=WP_005618620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618620.1;locus_tag=D1109_RS08140;product=hypothetical protein;protein_id=WP_005618620.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1666727 1667548 . - . ID=gene-D1109_RS08145;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=D1109_RS08145;old_locus_tag=D1109_08160 NZ_CP031858.1 Protein Homology CDS 1666727 1667548 . - 0 ID=cds-WP_009874642.1;Parent=gene-D1109_RS08145;Dbxref=Genbank:WP_009874642.1;Name=WP_009874642.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005602900.1;locus_tag=D1109_RS08145;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_009874642.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1667611 1668897 . - . ID=gene-D1109_RS08150;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=D1109_RS08150;old_locus_tag=D1109_08165 NZ_CP031858.1 Protein Homology CDS 1667611 1668897 . - 0 ID=cds-WP_005599800.1;Parent=gene-D1109_RS08150;Dbxref=Genbank:WP_005599800.1;Name=WP_005599800.1;Ontology_term=GO:0015803,GO:0015658;gbkey=CDS;gene=brnQ;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005602901.1;locus_tag=D1109_RS08150;product=branched-chain amino acid transport system II carrier protein;protein_id=WP_005599800.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1669029 1669754 . - . ID=gene-D1109_RS08155;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=D1109_RS08155;old_locus_tag=D1109_08170 NZ_CP031858.1 Protein Homology CDS 1669029 1669754 . - 0 ID=cds-WP_005602902.1;Parent=gene-D1109_RS08155;Dbxref=Genbank:WP_005602902.1;Name=WP_005602902.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599802.1;locus_tag=D1109_RS08155;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_005602902.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1669873 1670808 . - . ID=gene-D1109_RS08160;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=D1109_RS08160;old_locus_tag=D1109_08175 NZ_CP031858.1 Protein Homology CDS 1669873 1670808 . - 0 ID=cds-WP_005613520.1;Parent=gene-D1109_RS08160;Dbxref=Genbank:WP_005613520.1;Name=WP_005613520.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014990844.1;locus_tag=D1109_RS08160;product=ACP S-malonyltransferase;protein_id=WP_005613520.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1670875 1671621 . - . ID=gene-D1109_RS08165;Name=D1109_RS08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08165;old_locus_tag=D1109_08180 NZ_CP031858.1 Protein Homology CDS 1670875 1671621 . - 0 ID=cds-WP_005599805.1;Parent=gene-D1109_RS08165;Dbxref=Genbank:WP_005599805.1;Name=WP_005599805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250312.1;locus_tag=D1109_RS08165;product=epoxyqueuosine reductase QueH;protein_id=WP_005599805.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1671658 1672653 . - . ID=gene-D1109_RS08170;Name=ispB;gbkey=Gene;gene=ispB;gene_biotype=protein_coding;locus_tag=D1109_RS08170;old_locus_tag=D1109_08185 NZ_CP031858.1 Protein Homology CDS 1671658 1672653 . - 0 ID=cds-WP_005613522.1;Parent=gene-D1109_RS08170;Dbxref=Genbank:WP_005613522.1;Name=WP_005613522.1;gbkey=CDS;gene=ispB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005609423.1;locus_tag=D1109_RS08170;product=octaprenyl diphosphate synthase;protein_id=WP_005613522.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1672909 1673760 . + . ID=gene-D1109_RS08175;Name=D1109_RS08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08175;old_locus_tag=D1109_08190 NZ_CP031858.1 Protein Homology CDS 1672909 1673760 . + 0 ID=cds-WP_005618427.1;Parent=gene-D1109_RS08175;Dbxref=Genbank:WP_005618427.1;Name=WP_005618427.1;Ontology_term=GO:0006629;gbkey=CDS;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618427.1;locus_tag=D1109_RS08175;product=patatin-like phospholipase family protein;protein_id=WP_005618427.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1673924 1674475 . + . ID=gene-D1109_RS08180;Name=D1109_RS08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08180;old_locus_tag=D1109_08195 NZ_CP031858.1 Protein Homology CDS 1673924 1674475 . + 0 ID=cds-WP_005602917.1;Parent=gene-D1109_RS08180;Dbxref=Genbank:WP_005602917.1;Name=WP_005602917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005606098.1;locus_tag=D1109_RS08180;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_005602917.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1674676 1675089 . + . ID=gene-D1109_RS08185;Name=D1109_RS08185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08185;old_locus_tag=D1109_08200 NZ_CP031858.1 Protein Homology CDS 1674676 1675089 . + 0 ID=cds-WP_237610983.1;Parent=gene-D1109_RS08185;Dbxref=Genbank:WP_237610983.1;Name=WP_237610983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005613524.1;locus_tag=D1109_RS08185;product=DoxX family protein;protein_id=WP_237610983.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1675442 1675753 . + . ID=gene-D1109_RS08190;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=D1109_RS08190;old_locus_tag=D1109_08205 NZ_CP031858.1 Protein Homology CDS 1675442 1675753 . + 0 ID=cds-WP_005618624.1;Parent=gene-D1109_RS08190;Dbxref=Genbank:WP_005618624.1;Name=WP_005618624.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplU;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960603.1;locus_tag=D1109_RS08190;product=50S ribosomal protein L21;protein_id=WP_005618624.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1675774 1676031 . + . ID=gene-D1109_RS08195;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=D1109_RS08195;old_locus_tag=D1109_08210 NZ_CP031858.1 Protein Homology CDS 1675774 1676031 . + 0 ID=cds-WP_005599816.1;Parent=gene-D1109_RS08195;Dbxref=Genbank:WP_005599816.1;Name=WP_005599816.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007369914.1;locus_tag=D1109_RS08195;product=50S ribosomal protein L27;protein_id=WP_005599816.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1676066 1677055 . + . ID=gene-D1109_RS08200;Name=D1109_RS08200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08200;old_locus_tag=D1109_08215 NZ_CP031858.1 Protein Homology CDS 1676066 1677055 . + 0 ID=cds-WP_005613526.1;Parent=gene-D1109_RS08200;Dbxref=Genbank:WP_005613526.1;Name=WP_005613526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005613526.1;locus_tag=D1109_RS08200;product=DMT family transporter;protein_id=WP_005613526.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1677284 1678753 . - . ID=gene-D1109_RS08205;Name=D1109_RS08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08205;old_locus_tag=D1109_08220 NZ_CP031858.1 Protein Homology CDS 1677284 1678753 . - 0 ID=cds-WP_005599820.1;Parent=gene-D1109_RS08205;Dbxref=Genbank:WP_005599820.1;Name=WP_005599820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875468.1;locus_tag=D1109_RS08205;product=surface lipoprotein assembly modifier;protein_id=WP_005599820.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1678869 1679678 . - . ID=gene-D1109_RS08210;Name=D1109_RS08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08210;old_locus_tag=D1109_08225 NZ_CP031858.1 Protein Homology CDS 1678869 1679678 . - 0 ID=cds-WP_005602922.1;Parent=gene-D1109_RS08210;Dbxref=Genbank:WP_005602922.1;Name=WP_005602922.1;Ontology_term=GO:0008152;gbkey=CDS;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005610932.1;locus_tag=D1109_RS08210;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_005602922.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1679798 1680475 . + . ID=gene-D1109_RS08215;Name=D1109_RS08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08215;old_locus_tag=D1109_08230 NZ_CP031858.1 Protein Homology CDS 1679798 1680475 . + 0 ID=cds-WP_237610984.1;Parent=gene-D1109_RS08215;Dbxref=Genbank:WP_237610984.1;Name=WP_237610984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005606109.1;locus_tag=D1109_RS08215;product=amidophosphoribosyltransferase;protein_id=WP_237610984.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1680910 1681899 . - . ID=gene-D1109_RS08220;Name=rsmC;gbkey=Gene;gene=rsmC;gene_biotype=protein_coding;locus_tag=D1109_RS08220;old_locus_tag=D1109_08235 NZ_CP031858.1 Protein Homology CDS 1680910 1681899 . - 0 ID=cds-WP_005606597.1;Parent=gene-D1109_RS08220;Dbxref=Genbank:WP_005606597.1;Name=WP_005606597.1;Ontology_term=GO:0006364,GO:0003676,GO:0008990;gbkey=CDS;gene=rsmC;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005606597.1;locus_tag=D1109_RS08220;product=16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC;protein_id=WP_005606597.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1682004 1682426 . + . ID=gene-D1109_RS08225;Name=D1109_RS08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08225;old_locus_tag=D1109_08240 NZ_CP031858.1 Protein Homology CDS 1682004 1682426 . + 0 ID=cds-WP_005606599.1;Parent=gene-D1109_RS08225;Dbxref=Genbank:WP_005606599.1;Name=WP_005606599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005602924.1;locus_tag=D1109_RS08225;product=DNA polymerase III subunit psi;protein_id=WP_005606599.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1682419 1682856 . + . ID=gene-D1109_RS08230;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=D1109_RS08230;old_locus_tag=D1109_08245 NZ_CP031858.1 Protein Homology CDS 1682419 1682856 . + 0 ID=cds-WP_237610408.1;Parent=gene-D1109_RS08230;Dbxref=Genbank:WP_237610408.1;Name=WP_237610408.1;Ontology_term=GO:0006474,GO:0008080;gbkey=CDS;gene=rimI;go_function=N-acetyltransferase activity|0008080||IEA;go_process=N-terminal protein amino acid acetylation|0006474||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005616368.1;locus_tag=D1109_RS08230;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_237610408.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1682879 1684216 . + . ID=gene-D1109_RS08235;Name=srmB;gbkey=Gene;gene=srmB;gene_biotype=protein_coding;locus_tag=D1109_RS08235;old_locus_tag=D1109_08250 NZ_CP031858.1 Protein Homology CDS 1682879 1684216 . + 0 ID=cds-WP_237610985.1;Parent=gene-D1109_RS08235;Dbxref=Genbank:WP_237610985.1;Name=WP_237610985.1;Ontology_term=GO:0000027,GO:0003724;gbkey=CDS;gene=srmB;go_function=RNA helicase activity|0003724||IEA;go_process=ribosomal large subunit assembly|0000027||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618443.1;locus_tag=D1109_RS08235;product=ATP-dependent RNA helicase SrmB;protein_id=WP_237610985.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1684291 1684920 . + . ID=gene-D1109_RS08240;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=D1109_RS08240;old_locus_tag=D1109_08255 NZ_CP031858.1 Protein Homology CDS 1684291 1684920 . + 0 ID=cds-WP_005606603.1;Parent=gene-D1109_RS08240;Dbxref=Genbank:WP_005606603.1;Name=WP_005606603.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine-phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599834.1;locus_tag=D1109_RS08240;product=pyridoxamine 5'-phosphate oxidase;protein_id=WP_005606603.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1684992 1686629 . - . ID=gene-D1109_RS08245;Name=D1109_RS08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08245;old_locus_tag=D1109_08260 NZ_CP031858.1 Protein Homology CDS 1684992 1686629 . - 0 ID=cds-WP_237610986.1;Parent=gene-D1109_RS08245;Dbxref=Genbank:WP_237610986.1;Name=WP_237610986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005606119.1;locus_tag=D1109_RS08245;product=ABC transporter substrate-binding protein;protein_id=WP_237610986.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1686820 1688301 . - . ID=gene-D1109_RS08250;Name=D1109_RS08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08250;old_locus_tag=D1109_08265 NZ_CP031858.1 Protein Homology CDS 1686820 1688301 . - 0 ID=cds-WP_005602934.1;Parent=gene-D1109_RS08250;Dbxref=Genbank:WP_005602934.1;Name=WP_005602934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005616374.1;locus_tag=D1109_RS08250;product=aldehyde dehydrogenase family protein;protein_id=WP_005602934.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1688506 1689075 . - . ID=gene-D1109_RS08255;Name=D1109_RS08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08255;old_locus_tag=D1109_08270 NZ_CP031858.1 Protein Homology CDS 1688506 1689075 . - 0 ID=cds-WP_237610987.1;Parent=gene-D1109_RS08255;Dbxref=Genbank:WP_237610987.1;Name=WP_237610987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005613534.1;locus_tag=D1109_RS08255;product=acetate uptake transporter;protein_id=WP_237610987.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1689317 1690081 . + . ID=gene-D1109_RS08260;Name=D1109_RS08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08260;old_locus_tag=D1109_08275 NZ_CP031858.1 Protein Homology CDS 1689317 1690081 . + 0 ID=cds-WP_005613535.1;Parent=gene-D1109_RS08260;Dbxref=Genbank:WP_005613535.1;Name=WP_005613535.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005602936.1;locus_tag=D1109_RS08260;product=ATP-binding cassette domain-containing protein;protein_id=WP_005613535.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1690081 1691037 . + . ID=gene-D1109_RS08265;Name=D1109_RS08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08265;old_locus_tag=D1109_08280 NZ_CP031858.1 Protein Homology CDS 1690081 1691037 . + 0 ID=cds-WP_237610413.1;Parent=gene-D1109_RS08265;Dbxref=Genbank:WP_237610413.1;Name=WP_237610413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652608.1;locus_tag=D1109_RS08265;product=iron-siderophore ABC transporter substrate-binding protein;protein_id=WP_237610413.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1691031 1692983 . + . ID=gene-D1109_RS08270;Name=fhuB;gbkey=Gene;gene=fhuB;gene_biotype=protein_coding;locus_tag=D1109_RS08270;old_locus_tag=D1109_08285 NZ_CP031858.1 Protein Homology CDS 1691031 1692983 . + 0 ID=cds-WP_237610988.1;Parent=gene-D1109_RS08270;Dbxref=Genbank:WP_237610988.1;Name=WP_237610988.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=fhuB;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005606140.1;locus_tag=D1109_RS08270;product=Fe(3+)-hydroxamate ABC transporter permease FhuB;protein_id=WP_237610988.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1693030 1695117 . + . ID=gene-D1109_RS08275;Name=D1109_RS08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08275;old_locus_tag=D1109_08290 NZ_CP031858.1 Protein Homology CDS 1693030 1695117 . + 0 ID=cds-WP_237610989.1;Parent=gene-D1109_RS08275;Dbxref=Genbank:WP_237610989.1;Name=WP_237610989.1;Ontology_term=GO:0015891,GO:0015343,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=siderophore transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652610.1;locus_tag=D1109_RS08275;product=TonB-dependent siderophore receptor;protein_id=WP_237610989.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1695184 1695501 . + . ID=gene-D1109_RS08280;Name=D1109_RS08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08280;old_locus_tag=D1109_08295 NZ_CP031858.1 Protein Homology CDS 1695184 1695501 . + 0 ID=cds-WP_237593974.1;Parent=gene-D1109_RS08280;Dbxref=Genbank:WP_237593974.1;Name=WP_237593974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652611.1;locus_tag=D1109_RS08280;product=DUF2322 family protein;protein_id=WP_237593974.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1695591 1696448 . - . ID=gene-D1109_RS08285;Name=D1109_RS08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08285;old_locus_tag=D1109_08300 NZ_CP031858.1 Protein Homology CDS 1695591 1696448 . - 0 ID=cds-WP_005599854.1;Parent=gene-D1109_RS08285;Dbxref=Genbank:WP_005599854.1;Name=WP_005599854.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652612.1;locus_tag=D1109_RS08285;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_005599854.1;transl_table=11 NZ_CP031858.1 cmsearch sequence_feature 1696638 1696782 . + . ID=id-NZ_CP031858.1:1696638..1696782;Dbxref=RFAM:RF00514;Note=His leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 NZ_CP031858.1 RefSeq gene 1696817 1697716 . + . ID=gene-D1109_RS08290;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=D1109_RS08290;old_locus_tag=D1109_08305 NZ_CP031858.1 Protein Homology CDS 1696817 1697716 . + 0 ID=cds-WP_005599856.1;Parent=gene-D1109_RS08290;Dbxref=Genbank:WP_005599856.1;Name=WP_005599856.1;Ontology_term=GO:0000105,GO:0003879;gbkey=CDS;gene=hisG;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599856.1;locus_tag=D1109_RS08290;product=ATP phosphoribosyltransferase;protein_id=WP_005599856.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1697832 1699118 . + . ID=gene-D1109_RS08295;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=D1109_RS08295;old_locus_tag=D1109_08310 NZ_CP031858.1 Protein Homology CDS 1697832 1699118 . + 0 ID=cds-WP_237610990.1;Parent=gene-D1109_RS08295;Dbxref=Genbank:WP_237610990.1;Name=WP_237610990.1;Ontology_term=GO:0000105,GO:0004399;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015674516.1;locus_tag=D1109_RS08295;product=histidinol dehydrogenase;protein_id=WP_237610990.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1699242 1700294 . + . ID=gene-D1109_RS08300;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=D1109_RS08300;old_locus_tag=D1109_08315 NZ_CP031858.1 Protein Homology CDS 1699242 1700294 . + 0 ID=cds-WP_237610991.1;Parent=gene-D1109_RS08300;Dbxref=Genbank:WP_237610991.1;Name=WP_237610991.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618456.1;locus_tag=D1109_RS08300;product=histidinol-phosphate transaminase;protein_id=WP_237610991.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1700420 1700860 . + . ID=gene-D1109_RS08305;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=D1109_RS08305;old_locus_tag=D1109_08320 NZ_CP031858.1 Protein Homology CDS 1700420 1700860 . + 0 ID=cds-WP_237610992.1;Parent=gene-D1109_RS08305;Dbxref=Genbank:WP_237610992.1;Name=WP_237610992.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618457.1;locus_tag=D1109_RS08305;product=IS200/IS605 family transposase;protein_id=WP_237610992.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1700991 1702082 . + . ID=gene-D1109_RS08310;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=D1109_RS08310;old_locus_tag=D1109_08325 NZ_CP031858.1 Protein Homology CDS 1700991 1702082 . + 0 ID=cds-WP_005606171.1;Parent=gene-D1109_RS08310;Dbxref=Genbank:WP_005606171.1;Name=WP_005606171.1;Ontology_term=GO:0000105,GO:0004401,GO:0004424;gbkey=CDS;gene=hisB;go_function=histidinol-phosphatase activity|0004401||IEA,imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005606171.1;locus_tag=D1109_RS08310;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_005606171.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1702200 1702757 . + . ID=gene-D1109_RS08315;Name=D1109_RS08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08315;old_locus_tag=D1109_08330 NZ_CP031858.1 Protein Homology CDS 1702200 1702757 . + 0 ID=cds-WP_042655092.1;Parent=gene-D1109_RS08315;Dbxref=Genbank:WP_042655092.1;Name=WP_042655092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618640.1;locus_tag=D1109_RS08315;product=histidine phosphatase family protein;protein_id=WP_042655092.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1702878 1703684 . + . ID=gene-D1109_RS08320;Name=D1109_RS08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08320;old_locus_tag=D1109_08335 NZ_CP031858.1 Protein Homology CDS 1702878 1703684 . + 0 ID=cds-WP_197712262.1;Parent=gene-D1109_RS08320;Dbxref=Genbank:WP_197712262.1;Name=WP_197712262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005614225.1;locus_tag=D1109_RS08320;product=PDDEXK nuclease domain-containing protein;protein_id=WP_197712262.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1703810 1704400 . + . ID=gene-D1109_RS08325;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=D1109_RS08325;old_locus_tag=D1109_08340 NZ_CP031858.1 Protein Homology CDS 1703810 1704400 . + 0 ID=cds-WP_005606175.1;Parent=gene-D1109_RS08325;Dbxref=Genbank:WP_005606175.1;Name=WP_005606175.1;Ontology_term=GO:0000105,GO:0000107,GO:0016884;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA,carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005602961.1;locus_tag=D1109_RS08325;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_005606175.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1704521 1705273 . + . ID=gene-D1109_RS08330;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=D1109_RS08330;old_locus_tag=D1109_08345 NZ_CP031858.1 Protein Homology CDS 1704521 1705273 . + 0 ID=cds-WP_005606177.1;Parent=gene-D1109_RS08330;Dbxref=Genbank:WP_005606177.1;Name=WP_005606177.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015674522.1;locus_tag=D1109_RS08330;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=WP_005606177.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1705255 1706028 . + . ID=gene-D1109_RS08335;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=D1109_RS08335;old_locus_tag=D1109_08350 NZ_CP031858.1 Protein Homology CDS 1705255 1706028 . + 0 ID=cds-WP_005606179.1;Parent=gene-D1109_RS08335;Dbxref=Genbank:WP_005606179.1;Name=WP_005606179.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005624689.1;locus_tag=D1109_RS08335;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_005606179.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1706032 1707027 . + . ID=gene-D1109_RS08340;Name=D1109_RS08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08340;old_locus_tag=D1109_08355 NZ_CP031858.1 Protein Homology CDS 1706032 1707027 . + 0 ID=cds-WP_237610993.1;Parent=gene-D1109_RS08340;Dbxref=Genbank:WP_237610993.1;Name=WP_237610993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005606632.1;locus_tag=D1109_RS08340;product=FRG domain-containing protein;protein_id=WP_237610993.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1707308 1707952 . + . ID=gene-D1109_RS08345;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=D1109_RS08345;old_locus_tag=D1109_08360 NZ_CP031858.1 Protein Homology CDS 1707308 1707952 . + 0 ID=cds-WP_005606634.1;Parent=gene-D1109_RS08345;Dbxref=Genbank:WP_005606634.1;Name=WP_005606634.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005649391.1;locus_tag=D1109_RS08345;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=WP_005606634.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1708073 1708738 . + . ID=gene-D1109_RS08350;Name=D1109_RS08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08350;old_locus_tag=D1109_08365 NZ_CP031858.1 Protein Homology CDS 1708073 1708738 . + 0 ID=cds-WP_237610994.1;Parent=gene-D1109_RS08350;Dbxref=Genbank:WP_237610994.1;Name=WP_237610994.1;Ontology_term=GO:1990397;gbkey=CDS;go_process=queuosine salvage|1990397||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652624.1;locus_tag=D1109_RS08350;product=7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter;protein_id=WP_237610994.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1708845 1709651 . + . ID=gene-D1109_RS08355;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=D1109_RS08355;old_locus_tag=D1109_08370 NZ_CP031858.1 Protein Homology CDS 1708845 1709651 . + 0 ID=cds-WP_015674526.1;Parent=gene-D1109_RS08355;Dbxref=Genbank:WP_015674526.1;Name=WP_015674526.1;Ontology_term=GO:0006464;gbkey=CDS;gene=map;go_process=cellular protein modification process|0006464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874756.1;locus_tag=D1109_RS08355;product=type I methionyl aminopeptidase;protein_id=WP_015674526.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1709720 1710214 . - . ID=gene-D1109_RS08360;Name=D1109_RS08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08360;old_locus_tag=D1109_08375 NZ_CP031858.1 Protein Homology CDS 1709720 1710214 . - 0 ID=cds-WP_237610995.1;Parent=gene-D1109_RS08360;Dbxref=Genbank:WP_237610995.1;Name=WP_237610995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005602975.1;locus_tag=D1109_RS08360;product=thioredoxin family protein;protein_id=WP_237610995.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1710247 1711266 . - . ID=gene-D1109_RS08365;Name=D1109_RS08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08365;old_locus_tag=D1109_08380 NZ_CP031858.1 Protein Homology CDS 1710247 1711266 . - 0 ID=cds-WP_005618474.1;Parent=gene-D1109_RS08365;Dbxref=Genbank:WP_005618474.1;Name=WP_005618474.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005622180.1;locus_tag=D1109_RS08365;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_005618474.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1711336 1712772 . - . ID=gene-D1109_RS08370;Name=D1109_RS08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08370;old_locus_tag=D1109_08385 NZ_CP031858.1 Protein Homology CDS 1711336 1712772 . - 0 ID=cds-WP_237610996.1;Parent=gene-D1109_RS08370;Dbxref=Genbank:WP_237610996.1;Name=WP_237610996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005603139.1;locus_tag=D1109_RS08370;product=glycoside hydrolase family 32 protein;protein_id=WP_237610996.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1712826 1713749 . - . ID=gene-D1109_RS08375;Name=D1109_RS08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08375;old_locus_tag=D1109_08390 NZ_CP031858.1 Protein Homology CDS 1712826 1713749 . - 0 ID=cds-WP_126375496.1;Parent=gene-D1109_RS08375;Dbxref=Genbank:WP_126375496.1;Name=WP_126375496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005606644.1;locus_tag=D1109_RS08375;product=aminoimidazole riboside kinase;protein_id=WP_126375496.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1713894 1714973 . + . ID=gene-D1109_RS08380;Name=nirK;gbkey=Gene;gene=nirK;gene_biotype=protein_coding;locus_tag=D1109_RS08380;old_locus_tag=D1109_08395 NZ_CP031858.1 Protein Homology CDS 1713894 1714973 . + 0 ID=cds-WP_237610997.1;Parent=gene-D1109_RS08380;Dbxref=Genbank:WP_237610997.1;Name=WP_237610997.1;Ontology_term=GO:0006807,GO:0050421;gbkey=CDS;gene=nirK;go_function=nitrite reductase (NO-forming) activity|0050421||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005622175.1;locus_tag=D1109_RS08380;product=copper-containing nitrite reductase;protein_id=WP_237610997.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1715041 1716291 . - . ID=gene-D1109_RS08385;Name=lolE;gbkey=Gene;gene=lolE;gene_biotype=protein_coding;locus_tag=D1109_RS08385;old_locus_tag=D1109_08400 NZ_CP031858.1 Protein Homology CDS 1715041 1716291 . - 0 ID=cds-WP_237610998.1;Parent=gene-D1109_RS08385;Dbxref=Genbank:WP_237610998.1;Name=WP_237610998.1;Ontology_term=GO:0042953;gbkey=CDS;gene=lolE;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651448.1;locus_tag=D1109_RS08385;product=lipoprotein-releasing ABC transporter permease subunit LolE;protein_id=WP_237610998.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1716291 1716971 . - . ID=gene-D1109_RS08390;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=D1109_RS08390;old_locus_tag=D1109_08405 NZ_CP031858.1 Protein Homology CDS 1716291 1716971 . - 0 ID=cds-WP_009874752.1;Parent=gene-D1109_RS08390;Dbxref=Genbank:WP_009874752.1;Name=WP_009874752.1;Ontology_term=GO:0042953,GO:0005524,GO:0043190;gbkey=CDS;gene=lolD;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874752.1;locus_tag=D1109_RS08390;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=WP_009874752.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1717072 1718244 . - . ID=gene-D1109_RS08395;Name=D1109_RS08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08395;old_locus_tag=D1109_08410 NZ_CP031858.1 Protein Homology CDS 1717072 1718244 . - 0 ID=cds-WP_005595556.1;Parent=gene-D1109_RS08395;Dbxref=Genbank:WP_005595556.1;Name=WP_005595556.1;Ontology_term=GO:0042953,GO:0005887;gbkey=CDS;go_component=integral component of plasma membrane|0005887||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005609574.1;locus_tag=D1109_RS08395;product=lipoprotein-releasing ABC transporter permease subunit;protein_id=WP_005595556.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1718369 1719319 . - . ID=gene-D1109_RS08400;Name=D1109_RS08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08400;old_locus_tag=D1109_08415 NZ_CP031858.1 Protein Homology CDS 1718369 1719319 . - 0 ID=cds-WP_009874750.1;Parent=gene-D1109_RS08400;Dbxref=Genbank:WP_009874750.1;Name=WP_009874750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874750.1;locus_tag=D1109_RS08400;product=2-hydroxyacid dehydrogenase;protein_id=WP_009874750.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1719376 1720230 . - . ID=gene-D1109_RS08405;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=D1109_RS08405;old_locus_tag=D1109_08420 NZ_CP031858.1 Protein Homology CDS 1719376 1720230 . - 0 ID=cds-WP_012263503.1;Parent=gene-D1109_RS08405;Dbxref=Genbank:WP_012263503.1;Name=WP_012263503.1;Ontology_term=GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005595560.1;locus_tag=D1109_RS08405;product=3-deoxy-8-phosphooctulonate synthase;protein_id=WP_012263503.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1720281 1721147 . - . ID=gene-D1109_RS08410;Name=D1109_RS08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08410;old_locus_tag=D1109_08425 NZ_CP031858.1 Protein Homology CDS 1720281 1721147 . - 0 ID=cds-WP_012263504.1;Parent=gene-D1109_RS08410;Dbxref=Genbank:WP_012263504.1;Name=WP_012263504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015674537.1;locus_tag=D1109_RS08410;product=tetratricopeptide repeat protein;protein_id=WP_012263504.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1721131 1722021 . - . ID=gene-D1109_RS08415;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=D1109_RS08415;old_locus_tag=D1109_08430 NZ_CP031858.1 Protein Homology CDS 1721131 1722021 . - 0 ID=cds-WP_237610999.1;Parent=gene-D1109_RS08415;Dbxref=Genbank:WP_237610999.1;Name=WP_237610999.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005611099.1;locus_tag=D1109_RS08415;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_237610999.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1722023 1722550 . - . ID=gene-D1109_RS08420;Name=D1109_RS08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08420;old_locus_tag=D1109_08435 NZ_CP031858.1 Protein Homology CDS 1722023 1722550 . - 0 ID=cds-WP_237611000.1;Parent=gene-D1109_RS08420;Dbxref=Genbank:WP_237611000.1;Name=WP_237611000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005606662.1;locus_tag=D1109_RS08420;product=hypothetical protein;protein_id=WP_237611000.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1722613 1723695 . - . ID=gene-D1109_RS08425;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=D1109_RS08425;old_locus_tag=D1109_08440 NZ_CP031858.1 Protein Homology CDS 1722613 1723695 . - 0 ID=cds-WP_005602997.1;Parent=gene-D1109_RS08425;Dbxref=Genbank:WP_005602997.1;Name=WP_005602997.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005602997.1;locus_tag=D1109_RS08425;product=peptide chain release factor 1;protein_id=WP_005602997.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1723847 1725217 . - . ID=gene-D1109_RS08430;Name=D1109_RS08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08430;old_locus_tag=D1109_08445 NZ_CP031858.1 Protein Homology CDS 1723847 1725217 . - 0 ID=cds-WP_009874749.1;Parent=gene-D1109_RS08430;Dbxref=Genbank:WP_009874749.1;Name=WP_009874749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874749.1;locus_tag=D1109_RS08430;product=thiosulfate sulfurtransferase;protein_id=WP_009874749.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1725226 1726218 . - . ID=gene-D1109_RS08435;Name=D1109_RS08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08435;old_locus_tag=D1109_08450 NZ_CP031858.1 Protein Homology CDS 1725226 1726218 . - 0 ID=cds-WP_009874748.1;Parent=gene-D1109_RS08435;Dbxref=Genbank:WP_009874748.1;Name=WP_009874748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005611105.1;locus_tag=D1109_RS08435;product=YeeE/YedE family protein;protein_id=WP_009874748.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1726453 1727808 . + . ID=gene-D1109_RS08440;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=D1109_RS08440;old_locus_tag=D1109_08455 NZ_CP031858.1 Protein Homology CDS 1726453 1727808 . + 0 ID=cds-WP_237611001.1;Parent=gene-D1109_RS08440;Dbxref=Genbank:WP_237611001.1;Name=WP_237611001.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005609583.1;locus_tag=D1109_RS08440;product=chromosomal replication initiator protein DnaA;protein_id=WP_237611001.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1727825 1728928 . + . ID=gene-D1109_RS08445;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=D1109_RS08445;old_locus_tag=D1109_08460 NZ_CP031858.1 Protein Homology CDS 1727825 1728928 . + 0 ID=cds-WP_005595575.1;Parent=gene-D1109_RS08445;Dbxref=Genbank:WP_005595575.1;Name=WP_005595575.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651439.1;locus_tag=D1109_RS08445;product=DNA polymerase III subunit beta;protein_id=WP_005595575.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1729262 1730344 . + . ID=gene-D1109_RS08450;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=D1109_RS08450;old_locus_tag=D1109_08465 NZ_CP031858.1 Protein Homology CDS 1729262 1730344 . + 0 ID=cds-WP_043995246.1;Parent=gene-D1109_RS08450;Dbxref=Genbank:WP_043995246.1;Name=WP_043995246.1;Ontology_term=GO:0006281,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874747.1;locus_tag=D1109_RS08450;product=DNA replication/repair protein RecF;protein_id=WP_043995246.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1730400 1730972 . - . ID=gene-D1109_RS08455;Name=sodC;gbkey=Gene;gene=sodC;gene_biotype=protein_coding;locus_tag=D1109_RS08455;old_locus_tag=D1109_08470 NZ_CP031858.1 Protein Homology CDS 1730400 1730972 . - 0 ID=cds-WP_005603006.1;Parent=gene-D1109_RS08455;Dbxref=Genbank:WP_005603006.1;Name=WP_005603006.1;Ontology_term=GO:0004784;gbkey=CDS;gene=sodC;go_function=superoxide dismutase activity|0004784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005603167.1;locus_tag=D1109_RS08455;product=superoxide dismutase family protein;protein_id=WP_005603006.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1731155 1732267 . + . ID=gene-D1109_RS08460;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=D1109_RS08460;old_locus_tag=D1109_08475 NZ_CP031858.1 Protein Homology CDS 1731155 1732267 . + 0 ID=cds-WP_005595584.1;Parent=gene-D1109_RS08460;Dbxref=Genbank:WP_005595584.1;Name=WP_005595584.1;Ontology_term=GO:0009089,GO:0004073;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017357680.1;locus_tag=D1109_RS08460;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_005595584.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1732394 1733524 . - . ID=gene-D1109_RS08465;Name=D1109_RS08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08465;old_locus_tag=D1109_08480 NZ_CP031858.1 Protein Homology CDS 1732394 1733524 . - 0 ID=cds-WP_237586526.1;Parent=gene-D1109_RS08465;Dbxref=Genbank:WP_237586526.1;Name=WP_237586526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011848300.1;locus_tag=D1109_RS08465;product=porin;protein_id=WP_237586526.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1733673 1734854 . + . ID=gene-D1109_RS08470;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=D1109_RS08470;old_locus_tag=D1109_08485 NZ_CP031858.1 Protein Homology CDS 1733673 1734854 . + 0 ID=cds-WP_005603173.1;Parent=gene-D1109_RS08470;Dbxref=Genbank:WP_005603173.1;Name=WP_005603173.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012262660.1;locus_tag=D1109_RS08470;product=lipid-A-disaccharide synthase;protein_id=WP_005603173.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1734884 1735939 . + . ID=gene-D1109_RS08475;Name=sohB;gbkey=Gene;gene=sohB;gene_biotype=protein_coding;locus_tag=D1109_RS08475;old_locus_tag=D1109_08490 NZ_CP031858.1 Protein Homology CDS 1734884 1735939 . + 0 ID=cds-WP_237611002.1;Parent=gene-D1109_RS08475;Dbxref=Genbank:WP_237611002.1;Name=WP_237611002.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;gene=sohB;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005595593.1;locus_tag=D1109_RS08475;product=protease SohB;protein_id=WP_237611002.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1736174 1736632 . + . ID=gene-D1109_RS08480;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=D1109_RS08480;old_locus_tag=D1109_08495 NZ_CP031858.1 Protein Homology CDS 1736174 1736632 . + 0 ID=cds-WP_005616487.1;Parent=gene-D1109_RS08480;Dbxref=Genbank:WP_005616487.1;Name=WP_005616487.1;Ontology_term=GO:0051302,GO:0043565;gbkey=CDS;gene=mraZ;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of cell division|0051302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005616487.1;locus_tag=D1109_RS08480;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_005616487.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1736658 1737599 . + . ID=gene-D1109_RS08485;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=D1109_RS08485;old_locus_tag=D1109_08500 NZ_CP031858.1 Protein Homology CDS 1736658 1737599 . + 0 ID=cds-WP_237611003.1;Parent=gene-D1109_RS08485;Dbxref=Genbank:WP_237611003.1;Name=WP_237611003.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874743.1;locus_tag=D1109_RS08485;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_237611003.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1737612 1737926 . + . ID=gene-D1109_RS08490;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=D1109_RS08490;old_locus_tag=D1109_08505 NZ_CP031858.1 Protein Homology CDS 1737612 1737926 . + 0 ID=cds-WP_005595600.1;Parent=gene-D1109_RS08490;Dbxref=Genbank:WP_005595600.1;Name=WP_005595600.1;Ontology_term=GO:0000910,GO:0016021;gbkey=CDS;gene=ftsL;go_component=integral component of membrane|0016021||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014992125.1;locus_tag=D1109_RS08490;product=cell division protein FtsL;protein_id=WP_005595600.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1737930 1739990 . + . ID=gene-D1109_RS08495;Name=D1109_RS08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08495;old_locus_tag=D1109_08510 NZ_CP031858.1 Protein Homology CDS 1737930 1739990 . + 0 ID=cds-WP_237611004.1;Parent=gene-D1109_RS08495;Dbxref=Genbank:WP_237611004.1;Name=WP_237611004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005622210.1;locus_tag=D1109_RS08495;product=cell division protein FtsI;protein_id=WP_237611004.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1740014 1741516 . + . ID=gene-D1109_RS08500;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=D1109_RS08500;old_locus_tag=D1109_08515 NZ_CP031858.1 Protein Homology CDS 1740014 1741516 . + 0 ID=cds-WP_009874741.1;Parent=gene-D1109_RS08500;Dbxref=Genbank:WP_009874741.1;Name=WP_009874741.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016881;gbkey=CDS;gene=murE;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005603182.1;locus_tag=D1109_RS08500;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_009874741.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1741731 1743125 . + . ID=gene-D1109_RS08505;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=D1109_RS08505;old_locus_tag=D1109_08520 NZ_CP031858.1 Protein Homology CDS 1741731 1743125 . + 0 ID=cds-WP_237611005.1;Parent=gene-D1109_RS08505;Dbxref=Genbank:WP_237611005.1;Name=WP_237611005.1;Ontology_term=GO:0009058,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;gene=murF;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=biosynthetic process|0009058||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014992122.1;locus_tag=D1109_RS08505;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_237611005.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1743222 1744304 . + . ID=gene-D1109_RS08510;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=D1109_RS08510;old_locus_tag=D1109_08525 NZ_CP031858.1 Protein Homology CDS 1743222 1744304 . + 0 ID=cds-WP_237611006.1;Parent=gene-D1109_RS08510;Dbxref=Genbank:WP_237611006.1;Name=WP_237611006.1;Ontology_term=GO:0009252,GO:0008963;gbkey=CDS;gene=mraY;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010944283.1;locus_tag=D1109_RS08510;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_237611006.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1744388 1745698 . + . ID=gene-D1109_RS08515;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=D1109_RS08515;old_locus_tag=D1109_08530 NZ_CP031858.1 Protein Homology CDS 1744388 1745698 . + 0 ID=cds-WP_005595611.1;Parent=gene-D1109_RS08515;Dbxref=Genbank:WP_005595611.1;Name=WP_005595611.1;Ontology_term=GO:0009252,GO:0008764;gbkey=CDS;gene=murD;go_function=UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005606684.1;locus_tag=D1109_RS08515;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_005595611.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1745700 1746878 . + . ID=gene-D1109_RS08520;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=D1109_RS08520;old_locus_tag=D1109_08535 NZ_CP031858.1 Protein Homology CDS 1745700 1746878 . + 0 ID=cds-WP_237611007.1;Parent=gene-D1109_RS08520;Dbxref=Genbank:WP_237611007.1;Name=WP_237611007.1;Ontology_term=GO:0009252,GO:0051301,GO:0003674,GO:0016021;gbkey=CDS;gene=ftsW;go_component=integral component of membrane|0016021||IEA;go_function=molecular_function|0003674||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005595613.1;locus_tag=D1109_RS08520;product=putative lipid II flippase FtsW;protein_id=WP_237611007.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1747033 1748088 . + . ID=gene-D1109_RS08525;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=D1109_RS08525;old_locus_tag=D1109_08540 NZ_CP031858.1 Protein Homology CDS 1747033 1748088 . + 0 ID=cds-WP_005618675.1;Parent=gene-D1109_RS08525;Dbxref=Genbank:WP_005618675.1;Name=WP_005618675.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618675.1;locus_tag=D1109_RS08525;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_005618675.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1748140 1749567 . + . ID=gene-D1109_RS08530;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=D1109_RS08530;old_locus_tag=D1109_08545 NZ_CP031858.1 Protein Homology CDS 1748140 1749567 . + 0 ID=cds-WP_005595615.1;Parent=gene-D1109_RS08530;Dbxref=Genbank:WP_005595615.1;Name=WP_005595615.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018650902.1;locus_tag=D1109_RS08530;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_005595615.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1749675 1750586 . + . ID=gene-D1109_RS08535;Name=D1109_RS08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08535;old_locus_tag=D1109_08550 NZ_CP031858.1 Protein Homology CDS 1749675 1750586 . + 0 ID=cds-WP_005595616.1;Parent=gene-D1109_RS08535;Dbxref=Genbank:WP_005595616.1;Name=WP_005595616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014992116.1;locus_tag=D1109_RS08535;product=D-alanine--D-alanine ligase;protein_id=WP_005595616.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1750586 1751380 . + . ID=gene-D1109_RS08540;Name=D1109_RS08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08540;old_locus_tag=D1109_08555 NZ_CP031858.1 Protein Homology CDS 1750586 1751380 . + 0 ID=cds-WP_237611008.1;Parent=gene-D1109_RS08540;Dbxref=Genbank:WP_237611008.1;Name=WP_237611008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005622225.1;locus_tag=D1109_RS08540;product=cell division protein FtsQ/DivIB;protein_id=WP_237611008.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1751406 1752680 . + . ID=gene-D1109_RS08545;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=D1109_RS08545;old_locus_tag=D1109_08560 NZ_CP031858.1 Protein Homology CDS 1751406 1752680 . + 0 ID=cds-WP_237611009.1;Parent=gene-D1109_RS08545;Dbxref=Genbank:WP_237611009.1;Name=WP_237611009.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005603039.1;locus_tag=D1109_RS08545;product=cell division protein FtsA;protein_id=WP_237611009.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1752719 1753930 . + . ID=gene-D1109_RS08550;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=D1109_RS08550;old_locus_tag=D1109_08565 NZ_CP031858.1 Protein Homology CDS 1752719 1753930 . + 0 ID=cds-WP_005603042.1;Parent=gene-D1109_RS08550;Dbxref=Genbank:WP_005603042.1;Name=WP_005603042.1;Ontology_term=GO:0000910,GO:0003924;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005606688.1;locus_tag=D1109_RS08550;product=cell division protein FtsZ;protein_id=WP_005603042.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1753964 1754884 . + . ID=gene-D1109_RS08555;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=D1109_RS08555;old_locus_tag=D1109_08570 NZ_CP031858.1 Protein Homology CDS 1753964 1754884 . + 0 ID=cds-WP_005603044.1;Parent=gene-D1109_RS08555;Dbxref=Genbank:WP_005603044.1;Name=WP_005603044.1;Ontology_term=GO:0009245,GO:0008759;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity|0008759||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012073651.1;locus_tag=D1109_RS08555;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=WP_005603044.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1755046 1756719 . + . ID=gene-D1109_RS08560;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=D1109_RS08560;old_locus_tag=D1109_08575 NZ_CP031858.1 Protein Homology CDS 1755046 1756719 . + 0 ID=cds-WP_237593991.1;Parent=gene-D1109_RS08560;Dbxref=Genbank:WP_237593991.1;Name=WP_237593991.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005603194.1;locus_tag=D1109_RS08560;product=DNA repair protein RecN;protein_id=WP_237593991.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1756861 1758264 . - . ID=gene-D1109_RS08565;Name=D1109_RS08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08565;old_locus_tag=D1109_08580 NZ_CP031858.1 Protein Homology CDS 1756861 1758264 . - 0 ID=cds-WP_005603197.1;Parent=gene-D1109_RS08565;Dbxref=Genbank:WP_005603197.1;Name=WP_005603197.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874735.1;locus_tag=D1109_RS08565;product=ATP-binding cassette domain-containing protein;protein_id=WP_005603197.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1758264 1759049 . - . ID=gene-D1109_RS08570;Name=D1109_RS08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08570;old_locus_tag=D1109_08585 NZ_CP031858.1 Protein Homology CDS 1758264 1759049 . - 0 ID=cds-WP_005595629.1;Parent=gene-D1109_RS08570;Dbxref=Genbank:WP_005595629.1;Name=WP_005595629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014992110.1;locus_tag=D1109_RS08570;product=ABC transporter permease;protein_id=WP_005595629.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1759052 1759999 . - . ID=gene-D1109_RS08575;Name=D1109_RS08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08575;old_locus_tag=D1109_08590 NZ_CP031858.1 Protein Homology CDS 1759052 1759999 . - 0 ID=cds-WP_215578102.1;Parent=gene-D1109_RS08575;Dbxref=Genbank:WP_215578102.1;Name=WP_215578102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005611124.1;locus_tag=D1109_RS08575;product=ABC transporter permease;protein_id=WP_215578102.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1760093 1761667 . - . ID=gene-D1109_RS08580;Name=D1109_RS08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08580;old_locus_tag=D1109_08595 NZ_CP031858.1 Protein Homology CDS 1760093 1761667 . - 0 ID=cds-WP_005614255.1;Parent=gene-D1109_RS08580;Dbxref=Genbank:WP_005614255.1;Name=WP_005614255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874733.1;locus_tag=D1109_RS08580;product=ABC transporter substrate-binding protein;protein_id=WP_005614255.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1761861 1763441 . - . ID=gene-D1109_RS08585;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=D1109_RS08585;old_locus_tag=D1109_08600 NZ_CP031858.1 Protein Homology CDS 1761861 1763441 . - 0 ID=cds-WP_005595638.1;Parent=gene-D1109_RS08585;Dbxref=Genbank:WP_005595638.1;Name=WP_005595638.1;Ontology_term=GO:0006415,GO:0003747,GO:0005525;gbkey=CDS;gene=prfC;go_function=translation release factor activity|0003747||IEA,GTP binding|0005525||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005688062.1;locus_tag=D1109_RS08585;product=peptide chain release factor 3;protein_id=WP_005595638.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1763725 1764099 . + . ID=gene-D1109_RS08590;Name=D1109_RS08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08590;old_locus_tag=D1109_08605 NZ_CP031858.1 Protein Homology CDS 1763725 1764099 . + 0 ID=cds-WP_237611010.1;Parent=gene-D1109_RS08590;Dbxref=Genbank:WP_237611010.1;Name=WP_237611010.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017470.2;locus_tag=D1109_RS08590;product=DUF805 domain-containing protein;protein_id=WP_237611010.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1764146 1764661 . + . ID=gene-D1109_RS08595;Name=D1109_RS08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08595;old_locus_tag=D1109_08610 NZ_CP031858.1 Protein Homology CDS 1764146 1764661 . + 0 ID=cds-WP_215578101.1;Parent=gene-D1109_RS08595;Dbxref=Genbank:WP_215578101.1;Name=WP_215578101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005595642.1;locus_tag=D1109_RS08595;product=DUF805 domain-containing protein;protein_id=WP_215578101.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1764788 1765372 . + . ID=gene-D1109_RS08600;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=D1109_RS08600;old_locus_tag=D1109_08615 NZ_CP031858.1 Protein Homology CDS 1764788 1765372 . + 0 ID=cds-WP_005599985.1;Parent=gene-D1109_RS08600;Dbxref=Genbank:WP_005599985.1;Name=WP_005599985.1;Ontology_term=GO:0006412,GO:0004045;gbkey=CDS;gene=pth;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011199735.1;locus_tag=D1109_RS08600;product=aminoacyl-tRNA hydrolase;protein_id=WP_005599985.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1765481 1766572 . + . ID=gene-D1109_RS08605;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=D1109_RS08605;old_locus_tag=D1109_08620 NZ_CP031858.1 Protein Homology CDS 1765481 1766572 . + 0 ID=cds-WP_005618681.1;Parent=gene-D1109_RS08605;Dbxref=Genbank:WP_005618681.1;Name=WP_005618681.1;Ontology_term=GO:0005525;gbkey=CDS;gene=ychF;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005693776.1;locus_tag=D1109_RS08605;product=redox-regulated ATPase YchF;protein_id=WP_005618681.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1766644 1767081 . + . ID=gene-D1109_RS08610;Name=D1109_RS08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08610;old_locus_tag=D1109_08625 NZ_CP031858.1 Protein Homology CDS 1766644 1767081 . + 0 ID=cds-WP_237611011.1;Parent=gene-D1109_RS08610;Dbxref=Genbank:WP_237611011.1;Name=WP_237611011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005595645.1;locus_tag=D1109_RS08610;product=isoprenylcysteine carboxylmethyltransferase family protein;protein_id=WP_237611011.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1767131 1767406 . - . ID=gene-D1109_RS08615;Name=D1109_RS08615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08615;old_locus_tag=D1109_08630 NZ_CP031858.1 Protein Homology CDS 1767131 1767406 . - 0 ID=cds-WP_005599987.1;Parent=gene-D1109_RS08615;Dbxref=Genbank:WP_005599987.1;Name=WP_005599987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599987.1;locus_tag=D1109_RS08615;product=hypothetical protein;protein_id=WP_005599987.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1767437 1767901 . - . ID=gene-D1109_RS08620;Name=D1109_RS08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08620;old_locus_tag=D1109_08635 NZ_CP031858.1 Protein Homology CDS 1767437 1767901 . - 0 ID=cds-WP_005618683.1;Parent=gene-D1109_RS08620;Dbxref=Genbank:WP_005618683.1;Name=WP_005618683.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006996417.1;locus_tag=D1109_RS08620;product=glycine zipper 2TM domain-containing protein;protein_id=WP_005618683.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1767928 1768524 . - . ID=gene-D1109_RS08625;Name=D1109_RS08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08625;old_locus_tag=D1109_08640 NZ_CP031858.1 Protein Homology CDS 1767928 1768524 . - 0 ID=cds-WP_005595649.1;Parent=gene-D1109_RS08625;Dbxref=Genbank:WP_005595649.1;Name=WP_005595649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005595649.1;locus_tag=D1109_RS08625;product=VOC family protein;protein_id=WP_005595649.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1768622 1770349 . + . ID=gene-D1109_RS08630;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=D1109_RS08630;old_locus_tag=D1109_08645 NZ_CP031858.1 Protein Homology CDS 1768622 1770349 . + 0 ID=cds-WP_005595650.1;Parent=gene-D1109_RS08630;Dbxref=Genbank:WP_005595650.1;Name=WP_005595650.1;Ontology_term=GO:0006420,GO:0004814;gbkey=CDS;gene=argS;go_function=arginine-tRNA ligase activity|0004814||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011200504.1;locus_tag=D1109_RS08630;product=arginine--tRNA ligase;protein_id=WP_005595650.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1770493 1771668 . + . ID=gene-D1109_RS08635;Name=cgtA;gbkey=Gene;gene=cgtA;gene_biotype=protein_coding;locus_tag=D1109_RS08635;old_locus_tag=D1109_08650 NZ_CP031858.1 Protein Homology CDS 1770493 1771668 . + 0 ID=cds-WP_009874728.1;Parent=gene-D1109_RS08635;Dbxref=Genbank:WP_009874728.1;Name=WP_009874728.1;Ontology_term=GO:0042254,GO:0005525;gbkey=CDS;gene=cgtA;go_function=GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005622269.1;locus_tag=D1109_RS08635;product=Obg family GTPase CgtA;protein_id=WP_009874728.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1771743 1772354 . + . ID=gene-D1109_RS08640;Name=D1109_RS08640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08640;old_locus_tag=D1109_08655 NZ_CP031858.1 Protein Homology CDS 1771743 1772354 . + 0 ID=cds-WP_005595652.1;Parent=gene-D1109_RS08640;Dbxref=Genbank:WP_005595652.1;Name=WP_005595652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005603203.1;locus_tag=D1109_RS08640;product=glucose-6-phosphate 1-dehydrogenase family protein;protein_id=WP_005595652.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1772454 1773197 . - . ID=gene-D1109_RS08645;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=D1109_RS08645;old_locus_tag=D1109_08660 NZ_CP031858.1 Protein Homology CDS 1772454 1773197 . - 0 ID=cds-WP_014992094.1;Parent=gene-D1109_RS08645;Dbxref=Genbank:WP_014992094.1;Name=WP_014992094.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014992094.1;locus_tag=D1109_RS08645;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_014992094.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1773274 1774638 . - . ID=gene-D1109_RS08650;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=D1109_RS08650;old_locus_tag=D1109_08665 NZ_CP031858.1 Protein Homology CDS 1773274 1774638 . - 0 ID=cds-WP_237611012.1;Parent=gene-D1109_RS08650;Dbxref=Genbank:WP_237611012.1;Name=WP_237611012.1;Ontology_term=GO:0032049,GO:0008444;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005616526.1;locus_tag=D1109_RS08650;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_237611012.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1774790 1777606 . - . ID=gene-D1109_RS08655;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=D1109_RS08655;old_locus_tag=D1109_08670 NZ_CP031858.1 Protein Homology CDS 1774790 1777606 . - 0 ID=cds-WP_237611013.1;Parent=gene-D1109_RS08655;Dbxref=Genbank:WP_237611013.1;Name=WP_237611013.1;Ontology_term=GO:0006428,GO:0004822;gbkey=CDS;gene=ileS;go_function=isoleucine-tRNA ligase activity|0004822||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005616527.1;locus_tag=D1109_RS08655;product=isoleucine--tRNA ligase;protein_id=WP_237611013.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1777667 1778629 . - . ID=gene-D1109_RS08660;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=D1109_RS08660;old_locus_tag=D1109_08675 NZ_CP031858.1 Protein Homology CDS 1777667 1778629 . - 0 ID=cds-WP_005620383.1;Parent=gene-D1109_RS08660;Dbxref=Genbank:WP_005620383.1;Name=WP_005620383.1;Ontology_term=GO:0009231,GO:0003919,GO:0008531;gbkey=CDS;gene=ribF;go_function=FMN adenylyltransferase activity|0003919||IEA,riboflavin kinase activity|0008531||IEA;go_process=riboflavin biosynthetic process|0009231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874727.1;locus_tag=D1109_RS08660;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_005620383.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1778962 1780242 . + . ID=gene-D1109_RS08665;Name=nadR;gbkey=Gene;gene=nadR;gene_biotype=protein_coding;locus_tag=D1109_RS08665;old_locus_tag=D1109_08680 NZ_CP031858.1 Protein Homology CDS 1778962 1780242 . + 0 ID=cds-WP_005618688.1;Parent=gene-D1109_RS08665;Dbxref=Genbank:WP_005618688.1;Name=WP_005618688.1;Ontology_term=GO:0009058,GO:0000309,GO:0003677,GO:0050262;gbkey=CDS;gene=nadR;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,DNA binding|0003677||IEA,ribosylnicotinamide kinase activity|0050262||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618688.1;locus_tag=D1109_RS08665;product=multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR;protein_id=WP_005618688.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1780239 1780937 . + . ID=gene-D1109_RS08670;Name=D1109_RS08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08670;old_locus_tag=D1109_08685 NZ_CP031858.1 Protein Homology CDS 1780239 1780937 . + 0 ID=cds-WP_005595665.1;Parent=gene-D1109_RS08670;Dbxref=Genbank:WP_005595665.1;Name=WP_005595665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600000.1;locus_tag=D1109_RS08670;product=metallophosphoesterase;protein_id=WP_005595665.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1781110 1781826 . + . ID=gene-D1109_RS08675;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=D1109_RS08675;old_locus_tag=D1109_08690 NZ_CP031858.1 Protein Homology CDS 1781110 1781826 . + 0 ID=cds-WP_005595668.1;Parent=gene-D1109_RS08675;Dbxref=Genbank:WP_005595668.1;Name=WP_005595668.1;gbkey=CDS;gene=arcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005595668.1;locus_tag=D1109_RS08675;product=two-component system response regulator ArcA;protein_id=WP_005595668.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1781878 1782396 . + . ID=gene-D1109_RS08680;Name=D1109_RS08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08680;old_locus_tag=D1109_08695 NZ_CP031858.1 Protein Homology CDS 1781878 1782396 . + 0 ID=cds-WP_005595670.1;Parent=gene-D1109_RS08680;Dbxref=Genbank:WP_005595670.1;Name=WP_005595670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018650931.1;locus_tag=D1109_RS08680;product=porin family protein;protein_id=WP_005595670.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1782479 1783015 . - . ID=gene-D1109_RS08685;Name=D1109_RS08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08685;old_locus_tag=D1109_08700 NZ_CP031858.1 Protein Homology CDS 1782479 1783015 . - 0 ID=cds-WP_005600003.1;Parent=gene-D1109_RS08685;Dbxref=Genbank:WP_005600003.1;Name=WP_005600003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005603214.1;locus_tag=D1109_RS08685;product=HAD-IIIA family hydrolase;protein_id=WP_005600003.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1783070 1783765 . + . ID=gene-D1109_RS08690;Name=D1109_RS08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08690;old_locus_tag=D1109_08705 NZ_CP031858.1 Protein Homology CDS 1783070 1783765 . + 0 ID=cds-WP_237592842.1;Parent=gene-D1109_RS08690;Dbxref=Genbank:WP_237592842.1;Name=WP_237592842.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005611137.1;locus_tag=D1109_RS08690;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_237592842.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1783957 1785804 . + . ID=gene-D1109_RS08695;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=D1109_RS08695;old_locus_tag=D1109_08710 NZ_CP031858.1 Protein Homology CDS 1783957 1785804 . + 0 ID=cds-WP_005603219.1;Parent=gene-D1109_RS08695;Dbxref=Genbank:WP_005603219.1;Name=WP_005603219.1;Ontology_term=GO:0006412,GO:0006950,GO:0005525;gbkey=CDS;gene=typA;go_function=GTP binding|0005525||IEA;go_process=translation|0006412||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018650934.1;locus_tag=D1109_RS08695;product=translational GTPase TypA;protein_id=WP_005603219.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1785963 1786226 . + . ID=gene-D1109_RS08700;Name=D1109_RS08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08700;old_locus_tag=D1109_08715 NZ_CP031858.1 Protein Homology CDS 1785963 1786226 . + 0 ID=cds-WP_005595677.1;Parent=gene-D1109_RS08700;Dbxref=Genbank:WP_005595677.1;Name=WP_005595677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018650935.1;locus_tag=D1109_RS08700;product=GrxA family glutaredoxin;protein_id=WP_005595677.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1786292 1787008 . - . ID=gene-D1109_RS08705;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=D1109_RS08705;old_locus_tag=D1109_08720 NZ_CP031858.1 Protein Homology CDS 1786292 1787008 . - 0 ID=cds-WP_005600009.1;Parent=gene-D1109_RS08705;Dbxref=Genbank:WP_005600009.1;Name=WP_005600009.1;Ontology_term=GO:0008033,GO:0004549;gbkey=CDS;gene=rph;go_function=tRNA-specific ribonuclease activity|0004549||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005603221.1;locus_tag=D1109_RS08705;product=ribonuclease PH;protein_id=WP_005600009.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1787212 1788075 . + . ID=gene-D1109_RS08710;Name=D1109_RS08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08710;old_locus_tag=D1109_08725 NZ_CP031858.1 Protein Homology CDS 1787212 1788075 . + 0 ID=cds-WP_005603224.1;Parent=gene-D1109_RS08710;Dbxref=Genbank:WP_005603224.1;Name=WP_005603224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005823476.1;locus_tag=D1109_RS08710;product=YicC family protein;protein_id=WP_005603224.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1788085 1788972 . + . ID=gene-D1109_RS08715;Name=D1109_RS08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08715;old_locus_tag=D1109_08730 NZ_CP031858.1 Protein Homology CDS 1788085 1788972 . + 0 ID=cds-WP_039708896.1;Parent=gene-D1109_RS08715;Dbxref=Genbank:WP_039708896.1;Name=WP_039708896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875504.1;locus_tag=D1109_RS08715;product=folate-binding protein YgfZ;protein_id=WP_039708896.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1789022 1789282 . - . ID=gene-D1109_RS08720;Name=D1109_RS08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08720;old_locus_tag=D1109_08735 NZ_CP031858.1 Protein Homology CDS 1789022 1789282 . - 0 ID=cds-WP_005614274.1;Parent=gene-D1109_RS08720;Dbxref=Genbank:WP_005614274.1;Name=WP_005614274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001196283.1;locus_tag=D1109_RS08720;product=YfhL family 4Fe-4S dicluster ferredoxin;protein_id=WP_005614274.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1789428 1790057 . - . ID=gene-D1109_RS08725;Name=D1109_RS08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08725;old_locus_tag=D1109_08740 NZ_CP031858.1 Protein Homology CDS 1789428 1790057 . - 0 ID=cds-WP_237611014.1;Parent=gene-D1109_RS08725;Dbxref=Genbank:WP_237611014.1;Name=WP_237611014.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005622307.1;locus_tag=D1109_RS08725;product=response regulator;protein_id=WP_237611014.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1790261 1792399 . + . ID=gene-D1109_RS08730;Name=rlmKL;gbkey=Gene;gene=rlmKL;gene_biotype=protein_coding;locus_tag=D1109_RS08730;old_locus_tag=D1109_08745 NZ_CP031858.1 Protein Homology CDS 1790261 1792399 . + 0 ID=cds-WP_237611015.1;Parent=gene-D1109_RS08730;Dbxref=Genbank:WP_237611015.1;Name=WP_237611015.1;Ontology_term=GO:0031167,GO:0008990;gbkey=CDS;gene=rlmKL;go_function=rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018650943.1;locus_tag=D1109_RS08730;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;protein_id=WP_237611015.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1792457 1792936 . + . ID=gene-D1109_RS08735;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=D1109_RS08735;old_locus_tag=D1109_08750 NZ_CP031858.1 Protein Homology CDS 1792457 1792936 . + 0 ID=cds-WP_005595690.1;Parent=gene-D1109_RS08735;Dbxref=Genbank:WP_005595690.1;Name=WP_005595690.1;Ontology_term=GO:0006400,GO:0008175;gbkey=CDS;gene=trmL;go_function=tRNA methyltransferase activity|0008175||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015432117.1;locus_tag=D1109_RS08735;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WP_005595690.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1793076 1794023 . - . ID=gene-D1109_RS08740;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=D1109_RS08740;old_locus_tag=D1109_08755 NZ_CP031858.1 Protein Homology CDS 1793076 1794023 . - 0 ID=cds-WP_005595691.1;Parent=gene-D1109_RS08740;Dbxref=Genbank:WP_005595691.1;Name=WP_005595691.1;Ontology_term=GO:0006098,GO:0004801;gbkey=CDS;gene=tal;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014992075.1;locus_tag=D1109_RS08740;product=transaldolase;protein_id=WP_005595691.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1794522 1796063 . + . ID=gene-D1109_RS08745;Name=D1109_RS08745;gbkey=Gene;gene_biotype=rRNA;locus_tag=D1109_RS08745;old_locus_tag=D1109_08765 NZ_CP031858.1 cmsearch rRNA 1794522 1796063 . + . ID=rna-D1109_RS08745;Parent=gene-D1109_RS08745;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D1109_RS08745;product=16S ribosomal RNA NZ_CP031858.1 cmsearch exon 1794522 1796063 . + . ID=exon-D1109_RS08745-1;Parent=rna-D1109_RS08745;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D1109_RS08745;product=16S ribosomal RNA NZ_CP031858.1 RefSeq gene 1796146 1796222 . + . ID=gene-D1109_RS08750;Name=D1109_RS08750;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS08750;old_locus_tag=D1109_08770 NZ_CP031858.1 tRNAscan-SE tRNA 1796146 1796222 . + . ID=rna-D1109_RS08750;Parent=gene-D1109_RS08750;anticodon=(pos:1796180..1796182);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS08750;product=tRNA-Ile NZ_CP031858.1 tRNAscan-SE exon 1796146 1796222 . + . ID=exon-D1109_RS08750-1;Parent=rna-D1109_RS08750;anticodon=(pos:1796180..1796182);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS08750;product=tRNA-Ile NZ_CP031858.1 RefSeq gene 1796274 1796349 . + . ID=gene-D1109_RS08755;Name=D1109_RS08755;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS08755;old_locus_tag=D1109_08775 NZ_CP031858.1 tRNAscan-SE tRNA 1796274 1796349 . + . ID=rna-D1109_RS08755;Parent=gene-D1109_RS08755;anticodon=(pos:1796307..1796309);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS08755;product=tRNA-Ala NZ_CP031858.1 tRNAscan-SE exon 1796274 1796349 . + . ID=exon-D1109_RS08755-1;Parent=rna-D1109_RS08755;anticodon=(pos:1796307..1796309);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS08755;product=tRNA-Ala NZ_CP031858.1 RefSeq gene 1796616 1799517 . + . ID=gene-D1109_RS08760;Name=D1109_RS08760;gbkey=Gene;gene_biotype=rRNA;locus_tag=D1109_RS08760;old_locus_tag=D1109_08780 NZ_CP031858.1 cmsearch rRNA 1796616 1799517 . + . ID=rna-D1109_RS08760;Parent=gene-D1109_RS08760;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D1109_RS08760;product=23S ribosomal RNA NZ_CP031858.1 cmsearch exon 1796616 1799517 . + . ID=exon-D1109_RS08760-1;Parent=rna-D1109_RS08760;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D1109_RS08760;product=23S ribosomal RNA NZ_CP031858.1 RefSeq gene 1799677 1799792 . + . ID=gene-D1109_RS08765;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=D1109_RS08765;old_locus_tag=D1109_08785 NZ_CP031858.1 cmsearch rRNA 1799677 1799792 . + . ID=rna-D1109_RS08765;Parent=gene-D1109_RS08765;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D1109_RS08765;product=5S ribosomal RNA NZ_CP031858.1 cmsearch exon 1799677 1799792 . + . ID=exon-D1109_RS08765-1;Parent=rna-D1109_RS08765;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D1109_RS08765;product=5S ribosomal RNA NZ_CP031858.1 RefSeq gene 1799836 1799985 . - . ID=gene-D1109_RS08770;Name=D1109_RS08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08770 NZ_CP031858.1 GeneMarkS-2+ CDS 1799836 1799985 . - 0 ID=cds-WP_155114376.1;Parent=gene-D1109_RS08770;Dbxref=Genbank:WP_155114376.1;Name=WP_155114376.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=D1109_RS08770;product=hypothetical protein;protein_id=WP_155114376.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1800183 1801778 . + . ID=gene-D1109_RS08775;Name=D1109_RS08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08775;old_locus_tag=D1109_08790 NZ_CP031858.1 Protein Homology CDS 1800183 1801778 . + 0 ID=cds-WP_005603241.1;Parent=gene-D1109_RS08775;Dbxref=Genbank:WP_005603241.1;Name=WP_005603241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012262679.1;locus_tag=D1109_RS08775;product=ABC transporter substrate-binding protein;protein_id=WP_005603241.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1801946 1803547 . + . ID=gene-D1109_RS08780;Name=D1109_RS08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08780;old_locus_tag=D1109_08795 NZ_CP031858.1 Protein Homology CDS 1801946 1803547 . + 0 ID=cds-WP_011848305.1;Parent=gene-D1109_RS08780;Dbxref=Genbank:WP_011848305.1;Name=WP_011848305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005616566.1;locus_tag=D1109_RS08780;product=ABC transporter substrate-binding protein;protein_id=WP_011848305.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1803675 1804679 . + . ID=gene-D1109_RS08785;Name=D1109_RS08785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08785;old_locus_tag=D1109_08800 NZ_CP031858.1 Protein Homology CDS 1803675 1804679 . + 0 ID=cds-WP_005595696.1;Parent=gene-D1109_RS08785;Dbxref=Genbank:WP_005595696.1;Name=WP_005595696.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005595696.1;locus_tag=D1109_RS08785;product=ABC transporter permease subunit;protein_id=WP_005595696.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1804757 1805647 . + . ID=gene-D1109_RS08790;Name=D1109_RS08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08790;old_locus_tag=D1109_08805 NZ_CP031858.1 Protein Homology CDS 1804757 1805647 . + 0 ID=cds-WP_005595697.1;Parent=gene-D1109_RS08790;Dbxref=Genbank:WP_005595697.1;Name=WP_005595697.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875437.1;locus_tag=D1109_RS08790;product=ABC transporter permease subunit;protein_id=WP_005595697.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1805658 1806644 . + . ID=gene-D1109_RS08795;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=D1109_RS08795;old_locus_tag=D1109_08810 NZ_CP031858.1 Protein Homology CDS 1805658 1806644 . + 0 ID=cds-WP_005611156.1;Parent=gene-D1109_RS08795;Dbxref=Genbank:WP_005611156.1;Name=WP_005611156.1;Ontology_term=GO:0015833,GO:0000166,GO:0005524;gbkey=CDS;gene=dppD;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014992070.1;locus_tag=D1109_RS08795;product=dipeptide ABC transporter ATP-binding protein;protein_id=WP_005611156.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1806657 1807646 . + . ID=gene-D1109_RS08800;Name=D1109_RS08800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08800;old_locus_tag=D1109_08815 NZ_CP031858.1 Protein Homology CDS 1806657 1807646 . + 0 ID=cds-WP_009875438.1;Parent=gene-D1109_RS08800;Dbxref=Genbank:WP_009875438.1;Name=WP_009875438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005611159.1;locus_tag=D1109_RS08800;product=ABC transporter ATP-binding protein;protein_id=WP_009875438.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1807719 1808129 . - . ID=gene-D1109_RS08805;Name=psiE;gbkey=Gene;gene=psiE;gene_biotype=protein_coding;locus_tag=D1109_RS08805;old_locus_tag=D1109_08820 NZ_CP031858.1 Protein Homology CDS 1807719 1808129 . - 0 ID=cds-WP_005595704.1;Parent=gene-D1109_RS08805;Dbxref=Genbank:WP_005595704.1;Name=WP_005595704.1;gbkey=CDS;gene=psiE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005595704.1;locus_tag=D1109_RS08805;product=phosphate-starvation-inducible protein PsiE;protein_id=WP_005595704.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1808207 1808839 . - . ID=gene-D1109_RS08810;Name=D1109_RS08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08810;old_locus_tag=D1109_08825 NZ_CP031858.1 Protein Homology CDS 1808207 1808839 . - 0 ID=cds-WP_237611016.1;Parent=gene-D1109_RS08810;Dbxref=Genbank:WP_237611016.1;Name=WP_237611016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005595707.1;locus_tag=D1109_RS08810;product=hydrolase;protein_id=WP_237611016.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1808894 1809238 . - . ID=gene-D1109_RS08815;Name=D1109_RS08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08815;old_locus_tag=D1109_08830 NZ_CP031858.1 Protein Homology CDS 1808894 1809238 . - 0 ID=cds-WP_005595710.1;Parent=gene-D1109_RS08815;Dbxref=Genbank:WP_005595710.1;Name=WP_005595710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600044.1;locus_tag=D1109_RS08815;product=RidA family protein;protein_id=WP_005595710.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1809325 1810362 . - . ID=gene-D1109_RS08820;Name=D1109_RS08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08820;old_locus_tag=D1109_08835 NZ_CP031858.1 Protein Homology CDS 1809325 1810362 . - 0 ID=cds-WP_012262686.1;Parent=gene-D1109_RS08820;Dbxref=Genbank:WP_012262686.1;Name=WP_012262686.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247955.1;locus_tag=D1109_RS08820;product=branched-chain amino acid aminotransferase;protein_id=WP_012262686.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1810505 1810837 . - . ID=gene-D1109_RS08825;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=D1109_RS08825;old_locus_tag=D1109_08840 NZ_CP031858.1 Protein Homology CDS 1810505 1810837 . - 0 ID=cds-WP_005600046.1;Parent=gene-D1109_RS08825;Dbxref=Genbank:WP_005600046.1;Name=WP_005600046.1;Ontology_term=GO:0009055;gbkey=CDS;gene=grxD;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651289.1;locus_tag=D1109_RS08825;product=Grx4 family monothiol glutaredoxin;protein_id=WP_005600046.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1810909 1811514 . - . ID=gene-D1109_RS08830;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=D1109_RS08830;old_locus_tag=D1109_08845 NZ_CP031858.1 Protein Homology CDS 1810909 1811514 . - 0 ID=cds-WP_005618700.1;Parent=gene-D1109_RS08830;Dbxref=Genbank:WP_005618700.1;Name=WP_005618700.1;Ontology_term=GO:0006281,GO:0006310;gbkey=CDS;gene=recR;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015939588.1;locus_tag=D1109_RS08830;product=recombination mediator RecR;protein_id=WP_005618700.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1811585 1811914 . - . ID=gene-D1109_RS08835;Name=D1109_RS08835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08835;old_locus_tag=D1109_08850 NZ_CP031858.1 Protein Homology CDS 1811585 1811914 . - 0 ID=cds-WP_005600053.1;Parent=gene-D1109_RS08835;Dbxref=Genbank:WP_005600053.1;Name=WP_005600053.1;Ontology_term=GO:0008150,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001364632.1;locus_tag=D1109_RS08835;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_005600053.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1812083 1812949 . - . ID=gene-D1109_RS08840;Name=D1109_RS08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08840;old_locus_tag=D1109_08855 NZ_CP031858.1 Protein Homology CDS 1812083 1812949 . - 0 ID=cds-WP_009875505.1;Parent=gene-D1109_RS08840;Dbxref=Genbank:WP_009875505.1;Name=WP_009875505.1;Ontology_term=GO:0006810,GO:0015291;gbkey=CDS;go_function=secondary active transmembrane transporter activity|0015291||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005595716.1;locus_tag=D1109_RS08840;product=energy transducer TonB;protein_id=WP_009875505.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1812959 1813348 . - . ID=gene-D1109_RS08845;Name=exbD;gbkey=Gene;gene=exbD;gene_biotype=protein_coding;locus_tag=D1109_RS08845;old_locus_tag=D1109_08860 NZ_CP031858.1 Protein Homology CDS 1812959 1813348 . - 0 ID=cds-WP_005595717.1;Parent=gene-D1109_RS08845;Dbxref=Genbank:WP_005595717.1;Name=WP_005595717.1;Ontology_term=GO:0006810,GO:0015291;gbkey=CDS;gene=exbD;go_function=secondary active transmembrane transporter activity|0015291||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010944358.1;locus_tag=D1109_RS08845;product=TonB system transport protein ExbD;protein_id=WP_005595717.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1813393 1813845 . - . ID=gene-D1109_RS08850;Name=exbB;gbkey=Gene;gene=exbB;gene_biotype=protein_coding;locus_tag=D1109_RS08850;old_locus_tag=D1109_08865 NZ_CP031858.1 Protein Homology CDS 1813393 1813845 . - 0 ID=cds-WP_005595719.1;Parent=gene-D1109_RS08850;Dbxref=Genbank:WP_005595719.1;Name=WP_005595719.1;Ontology_term=GO:0006810,GO:0015078,GO:0015291,GO:0016020;gbkey=CDS;gene=exbB;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA,secondary active transmembrane transporter activity|0015291||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014992061.1;locus_tag=D1109_RS08850;product=TonB-system energizer ExbB;protein_id=WP_005595719.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1814033 1814359 . + . ID=gene-D1109_RS08855;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=D1109_RS08855;old_locus_tag=D1109_08870 NZ_CP031858.1 Protein Homology CDS 1814033 1814359 . + 0 ID=cds-WP_005595720.1;Parent=gene-D1109_RS08855;Dbxref=Genbank:WP_005595720.1;Name=WP_005595720.1;Ontology_term=GO:0004792;gbkey=CDS;gene=glpE;go_function=thiosulfate sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005595720.1;locus_tag=D1109_RS08855;product=thiosulfate sulfurtransferase GlpE;protein_id=WP_005595720.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1814403 1815248 . + . ID=gene-D1109_RS08860;Name=D1109_RS08860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08860;old_locus_tag=D1109_08875 NZ_CP031858.1 Protein Homology CDS 1814403 1815248 . + 0 ID=cds-WP_005611180.1;Parent=gene-D1109_RS08860;Dbxref=Genbank:WP_005611180.1;Name=WP_005611180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651283.1;locus_tag=D1109_RS08860;product=co-chaperone YbbN;protein_id=WP_005611180.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1815323 1815730 . - . ID=gene-D1109_RS08865;Name=dhaM;gbkey=Gene;gene=dhaM;gene_biotype=protein_coding;locus_tag=D1109_RS08865;old_locus_tag=D1109_08880 NZ_CP031858.1 Protein Homology CDS 1815323 1815730 . - 0 ID=cds-WP_005614298.1;Parent=gene-D1109_RS08865;Dbxref=Genbank:WP_005614298.1;Name=WP_005614298.1;Ontology_term=GO:0009401,GO:0019563,GO:0047324,GO:0016021;gbkey=CDS;gene=dhaM;go_component=integral component of membrane|0016021||IEA;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,glycerol catabolic process|0019563||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005614298.1;locus_tag=D1109_RS08865;product=PTS-dependent dihydroxyacetone kinase phosphotransferase subunit DhaM;protein_id=WP_005614298.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1815739 1816365 . - . ID=gene-D1109_RS08870;Name=dhaL;gbkey=Gene;gene=dhaL;gene_biotype=protein_coding;locus_tag=D1109_RS08870;old_locus_tag=D1109_08885 NZ_CP031858.1 Protein Homology CDS 1815739 1816365 . - 0 ID=cds-WP_005600065.1;Parent=gene-D1109_RS08870;Dbxref=Genbank:WP_005600065.1;Name=WP_005600065.1;Ontology_term=GO:0006071,GO:0004371;gbkey=CDS;gene=dhaL;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651281.1;locus_tag=D1109_RS08870;product=dihydroxyacetone kinase ADP-binding subunit DhaL;protein_id=WP_005600065.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1816367 1817437 . - . ID=gene-D1109_RS08875;Name=dhaK;gbkey=Gene;gene=dhaK;gene_biotype=protein_coding;locus_tag=D1109_RS08875;old_locus_tag=D1109_08890 NZ_CP031858.1 Protein Homology CDS 1816367 1817437 . - 0 ID=cds-WP_005600066.1;Parent=gene-D1109_RS08875;Dbxref=Genbank:WP_005600066.1;Name=WP_005600066.1;Ontology_term=GO:0006071,GO:0004371;gbkey=CDS;gene=dhaK;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012073177.1;locus_tag=D1109_RS08875;product=dihydroxyacetone kinase subunit DhaK;protein_id=WP_005600066.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1817607 1818560 . + . ID=gene-D1109_RS08880;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=D1109_RS08880;old_locus_tag=D1109_08895 NZ_CP031858.1 Protein Homology CDS 1817607 1818560 . + 0 ID=cds-WP_005600067.1;Parent=gene-D1109_RS08880;Dbxref=Genbank:WP_005600067.1;Name=WP_005600067.1;Ontology_term=GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase activity|0004791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005595726.1;locus_tag=D1109_RS08880;product=thioredoxin-disulfide reductase;protein_id=WP_005600067.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1818668 1819420 . + . ID=gene-D1109_RS08885;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=D1109_RS08885;old_locus_tag=D1109_08900 NZ_CP031858.1 Protein Homology CDS 1818668 1819420 . + 0 ID=cds-WP_005618701.1;Parent=gene-D1109_RS08885;Dbxref=Genbank:WP_005618701.1;Name=WP_005618701.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014992054.1;locus_tag=D1109_RS08885;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_005618701.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1819544 1819969 . + . ID=gene-D1109_RS08890;Name=D1109_RS08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08890;old_locus_tag=D1109_08905 NZ_CP031858.1 Protein Homology CDS 1819544 1819969 . + 0 ID=cds-WP_005595728.1;Parent=gene-D1109_RS08890;Dbxref=Genbank:WP_005595728.1;Name=WP_005595728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014992053.1;locus_tag=D1109_RS08890;product=YidB family protein;protein_id=WP_005595728.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1820043 1820831 . - . ID=gene-D1109_RS08895;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=D1109_RS08895;old_locus_tag=D1109_08910 NZ_CP031858.1 Protein Homology CDS 1820043 1820831 . - 0 ID=cds-WP_237611017.1;Parent=gene-D1109_RS08895;Dbxref=Genbank:WP_237611017.1;Name=WP_237611017.1;Ontology_term=GO:0000210;gbkey=CDS;gene=nudC;go_function=NAD+ diphosphatase activity|0000210||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005603260.1;locus_tag=D1109_RS08895;product=NAD(+) diphosphatase;protein_id=WP_237611017.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1820831 1821529 . - . ID=gene-D1109_RS08900;Name=D1109_RS08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08900;old_locus_tag=D1109_08915 NZ_CP031858.1 Protein Homology CDS 1820831 1821529 . - 0 ID=cds-WP_005616579.1;Parent=gene-D1109_RS08900;Dbxref=Genbank:WP_005616579.1;Name=WP_005616579.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005603262.1;locus_tag=D1109_RS08900;product=pseudouridine synthase;protein_id=WP_005616579.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1821530 1822378 . - . ID=gene-D1109_RS08905;Name=D1109_RS08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08905;old_locus_tag=D1109_08920 NZ_CP031858.1 Protein Homology CDS 1821530 1822378 . - 0 ID=cds-WP_237611018.1;Parent=gene-D1109_RS08905;Dbxref=Genbank:WP_237611018.1;Name=WP_237611018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005595732.1;locus_tag=D1109_RS08905;product=DMT family transporter;protein_id=WP_237611018.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1822378 1822842 . - . ID=gene-D1109_RS08910;Name=D1109_RS08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08910;old_locus_tag=D1109_08925 NZ_CP031858.1 Protein Homology CDS 1822378 1822842 . - 0 ID=cds-WP_005600072.1;Parent=gene-D1109_RS08910;Dbxref=Genbank:WP_005600072.1;Name=WP_005600072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005606776.1;locus_tag=D1109_RS08910;product=FxsA family protein;protein_id=WP_005600072.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1822865 1824196 . - . ID=gene-D1109_RS08915;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=D1109_RS08915;old_locus_tag=D1109_08930 NZ_CP031858.1 Protein Homology CDS 1822865 1824196 . - 0 ID=cds-WP_005606778.1;Parent=gene-D1109_RS08915;Dbxref=Genbank:WP_005606778.1;Name=WP_005606778.1;gbkey=CDS;gene=pepQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005603268.1;locus_tag=D1109_RS08915;product=Xaa-Pro dipeptidase;protein_id=WP_005606778.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1824220 1824459 . + . ID=gene-D1109_RS08920;Name=tusA;gbkey=Gene;gene=tusA;gene_biotype=protein_coding;locus_tag=D1109_RS08920;old_locus_tag=D1109_08935 NZ_CP031858.1 Protein Homology CDS 1824220 1824459 . + 0 ID=cds-WP_005603270.1;Parent=gene-D1109_RS08920;Dbxref=Genbank:WP_005603270.1;Name=WP_005603270.1;Ontology_term=GO:0002143,GO:0097163;gbkey=CDS;gene=tusA;go_function=sulfur carrier activity|0097163||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600076.1;locus_tag=D1109_RS08920;product=sulfurtransferase TusA;protein_id=WP_005603270.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1824509 1824949 . - . ID=gene-D1109_RS08925;Name=rraB;gbkey=Gene;gene=rraB;gene_biotype=protein_coding;locus_tag=D1109_RS08925;old_locus_tag=D1109_08940 NZ_CP031858.1 Protein Homology CDS 1824509 1824949 . - 0 ID=cds-WP_005595739.1;Parent=gene-D1109_RS08925;Dbxref=Genbank:WP_005595739.1;Name=WP_005595739.1;gbkey=CDS;gene=rraB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005595739.1;locus_tag=D1109_RS08925;product=ribonuclease E inhibitor RraB;protein_id=WP_005595739.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1824951 1825571 . - . ID=gene-D1109_RS08930;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=D1109_RS08930;old_locus_tag=D1109_08945 NZ_CP031858.1 Protein Homology CDS 1824951 1825571 . - 0 ID=cds-WP_237611019.1;Parent=gene-D1109_RS08930;Dbxref=Genbank:WP_237611019.1;Name=WP_237611019.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022;gbkey=CDS;gene=yihA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005624241.1;locus_tag=D1109_RS08930;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_237611019.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1825870 1826292 . - . ID=gene-D1109_RS08935;Name=D1109_RS08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08935;old_locus_tag=D1109_08950 NZ_CP031858.1 Protein Homology CDS 1825870 1826292 . - 0 ID=cds-WP_237611020.1;Parent=gene-D1109_RS08935;Dbxref=Genbank:WP_237611020.1;Name=WP_237611020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014992044.1;locus_tag=D1109_RS08935;product=DUF805 domain-containing protein;protein_id=WP_237611020.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1826330 1827160 . - . ID=gene-D1109_RS08940;Name=D1109_RS08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08940;old_locus_tag=D1109_08955 NZ_CP031858.1 Protein Homology CDS 1826330 1827160 . - 0 ID=cds-WP_237611021.1;Parent=gene-D1109_RS08940;Dbxref=Genbank:WP_237611021.1;Name=WP_237611021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618704.1;locus_tag=D1109_RS08940;product=ZIP family metal transporter;protein_id=WP_237611021.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1827311 1829146 . - . ID=gene-D1109_RS08945;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=D1109_RS08945;old_locus_tag=D1109_08960 NZ_CP031858.1 Protein Homology CDS 1827311 1829146 . - 0 ID=cds-WP_237611022.1;Parent=gene-D1109_RS08945;Dbxref=Genbank:WP_237611022.1;Name=WP_237611022.1;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600080.1;locus_tag=D1109_RS08945;product=dihydroxy-acid dehydratase;protein_id=WP_237611022.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1829263 1829481 . - . ID=gene-D1109_RS08950;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=D1109_RS08950;old_locus_tag=D1109_08965 NZ_CP031858.1 Protein Homology CDS 1829263 1829481 . - 0 ID=cds-WP_011848314.1;Parent=gene-D1109_RS08950;Dbxref=Genbank:WP_011848314.1;Name=WP_011848314.1;gbkey=CDS;gene=ilvM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005620268.1;locus_tag=D1109_RS08950;product=acetolactate synthase 2 small subunit;protein_id=WP_011848314.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1829502 1831154 . - . ID=gene-D1109_RS08955;Name=ilvG;gbkey=Gene;gene=ilvG;gene_biotype=protein_coding;locus_tag=D1109_RS08955;old_locus_tag=D1109_08970 NZ_CP031858.1 Protein Homology CDS 1829502 1831154 . - 0 ID=cds-WP_005614310.1;Parent=gene-D1109_RS08955;Dbxref=Genbank:WP_005614310.1;Name=WP_005614310.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvG;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014992040.1;locus_tag=D1109_RS08955;product=acetolactate synthase 2 catalytic subunit;protein_id=WP_005614310.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1831553 1833064 . + . ID=gene-D1109_RS08960;Name=nrfA;gbkey=Gene;gene=nrfA;gene_biotype=protein_coding;locus_tag=D1109_RS08960;old_locus_tag=D1109_08975 NZ_CP031858.1 Protein Homology CDS 1831553 1833064 . + 0 ID=cds-WP_237611023.1;Parent=gene-D1109_RS08960;Dbxref=Genbank:WP_237611023.1;Name=WP_237611023.1;Ontology_term=GO:0042279;gbkey=CDS;gene=nrfA;go_function=nitrite reductase (cytochrome%2C ammonia-forming) activity|0042279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249706.1;locus_tag=D1109_RS08960;product=ammonia-forming nitrite reductase cytochrome c552 subunit;protein_id=WP_237611023.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1833085 1833732 . + . ID=gene-D1109_RS08965;Name=nrfB;gbkey=Gene;gene=nrfB;gene_biotype=protein_coding;locus_tag=D1109_RS08965;old_locus_tag=D1109_08980 NZ_CP031858.1 Protein Homology CDS 1833085 1833732 . + 0 ID=cds-WP_005595747.1;Parent=gene-D1109_RS08965;Dbxref=Genbank:WP_005595747.1;Name=WP_005595747.1;Ontology_term=GO:0006807,GO:0042597;gbkey=CDS;gene=nrfB;go_component=periplasmic space|0042597||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005603279.1;locus_tag=D1109_RS08965;product=cytochrome c nitrite reductase pentaheme subunit;protein_id=WP_005595747.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1833732 1834409 . + . ID=gene-D1109_RS08970;Name=nrfC;gbkey=Gene;gene=nrfC;gene_biotype=protein_coding;locus_tag=D1109_RS08970;old_locus_tag=D1109_08985 NZ_CP031858.1 Protein Homology CDS 1833732 1834409 . + 0 ID=cds-WP_005618707.1;Parent=gene-D1109_RS08970;Dbxref=Genbank:WP_005618707.1;Name=WP_005618707.1;gbkey=CDS;gene=nrfC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007524349.1;locus_tag=D1109_RS08970;product=cytochrome c nitrite reductase Fe-S protein;protein_id=WP_005618707.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1834409 1835377 . + . ID=gene-D1109_RS08975;Name=nrfD;gbkey=Gene;gene=nrfD;gene_biotype=protein_coding;locus_tag=D1109_RS08975;old_locus_tag=D1109_08990 NZ_CP031858.1 Protein Homology CDS 1834409 1835377 . + 0 ID=cds-WP_237611024.1;Parent=gene-D1109_RS08975;Dbxref=Genbank:WP_237611024.1;Name=WP_237611024.1;gbkey=CDS;gene=nrfD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011848317.1;locus_tag=D1109_RS08975;product=cytochrome c nitrite reductase subunit NrfD;protein_id=WP_237611024.1;transl_table=11 NZ_CP031858.1 RefSeq pseudogene 1835665 1837812 . + . ID=gene-D1109_RS08980;Name=D1109_RS08980;end_range=1837812,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D1109_RS08980;partial=true;pseudo=true NZ_CP031858.1 Protein Homology CDS 1835665 1837812 . + 0 ID=cds-D1109_RS08980;Parent=gene-D1109_RS08980;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1837812,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024418.2;locus_tag=D1109_RS08980;partial=true;product=adhesin;pseudo=true;transl_table=11 NZ_CP031858.1 RefSeq pseudogene 1837954 1848836 . + . ID=gene-D1109_RS08985;Name=D1109_RS08985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D1109_RS08985;old_locus_tag=D1109_09000;pseudo=true NZ_CP031858.1 Protein Homology CDS 1837954 1848836 . + 0 ID=cds-D1109_RS08985;Parent=gene-D1109_RS08985;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875083.1;locus_tag=D1109_RS08985;product=YadA-like family protein;pseudo=true;transl_table=11 NZ_CP031858.1 RefSeq gene 1849074 1850303 . - . ID=gene-D1109_RS08990;Name=D1109_RS08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS08990;old_locus_tag=D1109_09005 NZ_CP031858.1 Protein Homology CDS 1849074 1850303 . - 0 ID=cds-WP_237610445.1;Parent=gene-D1109_RS08990;Dbxref=Genbank:WP_237610445.1;Name=WP_237610445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005624218.1;locus_tag=D1109_RS08990;product=NCS2 family protein;protein_id=WP_237610445.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1850462 1854067 . - . ID=gene-D1109_RS08995;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=D1109_RS08995;old_locus_tag=D1109_09010 NZ_CP031858.1 Protein Homology CDS 1850462 1854067 . - 0 ID=cds-WP_237611025.1;Parent=gene-D1109_RS08995;Dbxref=Genbank:WP_237611025.1;Name=WP_237611025.1;Ontology_term=GO:0006355,GO:0010133,GO:0003700,GO:0003842,GO:0004657,GO:0016620;gbkey=CDS;gene=putA;go_function=DNA-binding transcription factor activity|0003700||IEA,1-pyrroline-5-carboxylate dehydrogenase activity|0003842||IEA,proline dehydrogenase activity|0004657||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA,proline catabolic process to glutamate|0010133||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011848319.1;locus_tag=D1109_RS08995;product=bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA;protein_id=WP_237611025.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1854170 1855684 . - . ID=gene-D1109_RS09000;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=D1109_RS09000;old_locus_tag=D1109_09015 NZ_CP031858.1 Protein Homology CDS 1854170 1855684 . - 0 ID=cds-WP_237592860.1;Parent=gene-D1109_RS09000;Dbxref=Genbank:WP_237592860.1;Name=WP_237592860.1;Ontology_term=GO:0015824,GO:0005298,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA;go_process=proline transport|0015824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012478284.1;locus_tag=D1109_RS09000;product=sodium/proline symporter PutP;protein_id=WP_237592860.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1856259 1857044 . - . ID=gene-D1109_RS09005;Name=D1109_RS09005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09005;old_locus_tag=D1109_09020 NZ_CP031858.1 Protein Homology CDS 1856259 1857044 . - 0 ID=cds-WP_237611026.1;Parent=gene-D1109_RS09005;Dbxref=Genbank:WP_237611026.1;Name=WP_237611026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005595781.1;locus_tag=D1109_RS09005;product=IclR family transcriptional regulator;protein_id=WP_237611026.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1857041 1857616 . - . ID=gene-D1109_RS09010;Name=D1109_RS09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09010;old_locus_tag=D1109_09025 NZ_CP031858.1 Protein Homology CDS 1857041 1857616 . - 0 ID=cds-WP_237611027.1;Parent=gene-D1109_RS09010;Dbxref=Genbank:WP_237611027.1;Name=WP_237611027.1;Ontology_term=GO:0006730,GO:0030272;gbkey=CDS;go_function=5-formyltetrahydrofolate cyclo-ligase activity|0030272||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005614323.1;locus_tag=D1109_RS09010;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_237611027.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1857637 1857818 . - . ID=gene-D1109_RS09015;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=D1109_RS09015;old_locus_tag=D1109_09030 NZ_CP031858.1 cmsearch ncRNA 1857637 1857818 . - . ID=rna-D1109_RS09015;Parent=gene-D1109_RS09015;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D1109_RS09015;product=6S RNA NZ_CP031858.1 cmsearch exon 1857637 1857818 . - . ID=exon-D1109_RS09015-1;Parent=rna-D1109_RS09015;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D1109_RS09015;product=6S RNA NZ_CP031858.1 RefSeq gene 1857887 1858207 . - . ID=gene-D1109_RS09020;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=D1109_RS09020;old_locus_tag=D1109_09035 NZ_CP031858.1 Protein Homology CDS 1857887 1858207 . - 0 ID=cds-WP_005595785.1;Parent=gene-D1109_RS09020;Dbxref=Genbank:WP_005595785.1;Name=WP_005595785.1;gbkey=CDS;gene=zapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600115.1;locus_tag=D1109_RS09020;product=cell division protein ZapA;protein_id=WP_005595785.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1858285 1858836 . + . ID=gene-D1109_RS09025;Name=D1109_RS09025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09025;old_locus_tag=D1109_09040 NZ_CP031858.1 Protein Homology CDS 1858285 1858836 . + 0 ID=cds-WP_237611028.1;Parent=gene-D1109_RS09025;Dbxref=Genbank:WP_237611028.1;Name=WP_237611028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005624207.1;locus_tag=D1109_RS09025;product=UPF0149 family protein;protein_id=WP_237611028.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1858942 1860006 . + . ID=gene-D1109_RS09030;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=D1109_RS09030;old_locus_tag=D1109_09045 NZ_CP031858.1 Protein Homology CDS 1858942 1860006 . + 0 ID=cds-WP_005611232.1;Parent=gene-D1109_RS09030;Dbxref=Genbank:WP_005611232.1;Name=WP_005611232.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012262703.1;locus_tag=D1109_RS09030;product=uroporphyrinogen decarboxylase;protein_id=WP_005611232.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1860130 1860720 . + . ID=gene-D1109_RS09035;Name=D1109_RS09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09035;old_locus_tag=D1109_09050 NZ_CP031858.1 Protein Homology CDS 1860130 1860720 . + 0 ID=cds-WP_005618713.1;Parent=gene-D1109_RS09035;Dbxref=Genbank:WP_005618713.1;Name=WP_005618713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005620054.1;locus_tag=D1109_RS09035;product=DUF416 family protein;protein_id=WP_005618713.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1860856 1861128 . + . ID=gene-D1109_RS09040;Name=D1109_RS09040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09040;old_locus_tag=D1109_09055 NZ_CP031858.1 Protein Homology CDS 1860856 1861128 . + 0 ID=cds-WP_005595795.1;Parent=gene-D1109_RS09040;Dbxref=Genbank:WP_005595795.1;Name=WP_005595795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005819506.1;locus_tag=D1109_RS09040;product=HU family DNA-binding protein;protein_id=WP_005595795.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1861181 1862032 . - . ID=gene-D1109_RS09045;Name=D1109_RS09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09045;old_locus_tag=D1109_09060 NZ_CP031858.1 Protein Homology CDS 1861181 1862032 . - 0 ID=cds-WP_005595797.1;Parent=gene-D1109_RS09045;Dbxref=Genbank:WP_005595797.1;Name=WP_005595797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005701564.1;locus_tag=D1109_RS09045;product=thymidylate synthase;protein_id=WP_005595797.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1862120 1862704 . + . ID=gene-D1109_RS09050;Name=D1109_RS09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09050;old_locus_tag=D1109_09065 NZ_CP031858.1 Protein Homology CDS 1862120 1862704 . + 0 ID=cds-WP_005603308.1;Parent=gene-D1109_RS09050;Dbxref=Genbank:WP_005603308.1;Name=WP_005603308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005595799.1;locus_tag=D1109_RS09050;product=hypothetical protein;protein_id=WP_005603308.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1862800 1863810 . + . ID=gene-D1109_RS09055;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=D1109_RS09055;old_locus_tag=D1109_09070 NZ_CP031858.1 Protein Homology CDS 1862800 1863810 . + 0 ID=cds-WP_005603309.1;Parent=gene-D1109_RS09055;Dbxref=Genbank:WP_005603309.1;Name=WP_005603309.1;Ontology_term=GO:0009102,GO:0004076,GO:0051537,GO:0051539,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005603309.1;locus_tag=D1109_RS09055;product=biotin synthase BioB;protein_id=WP_005603309.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1863874 1864083 . - . ID=gene-D1109_RS09060;Name=D1109_RS09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09060;old_locus_tag=D1109_09075 NZ_CP031858.1 Protein Homology CDS 1863874 1864083 . - 0 ID=cds-WP_005595803.1;Parent=gene-D1109_RS09060;Dbxref=Genbank:WP_005595803.1;Name=WP_005595803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034825.1;locus_tag=D1109_RS09060;product=cold-shock protein;protein_id=WP_005595803.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1864446 1864994 . + . ID=gene-D1109_RS09065;Name=proQ;gbkey=Gene;gene=proQ;gene_biotype=protein_coding;locus_tag=D1109_RS09065;old_locus_tag=D1109_09080 NZ_CP031858.1 Protein Homology CDS 1864446 1864994 . + 0 ID=cds-WP_005595806.1;Parent=gene-D1109_RS09065;Dbxref=Genbank:WP_005595806.1;Name=WP_005595806.1;Ontology_term=GO:0010608,GO:0033592,GO:0034057;gbkey=CDS;gene=proQ;go_function=RNA strand annealing activity|0033592||IEA,RNA strand-exchange activity|0034057||IEA;go_process=posttranscriptional regulation of gene expression|0010608||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005595806.1;locus_tag=D1109_RS09065;product=RNA chaperone ProQ;protein_id=WP_005595806.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1865086 1867098 . + . ID=gene-D1109_RS09070;Name=prc;gbkey=Gene;gene=prc;gene_biotype=protein_coding;locus_tag=D1109_RS09070;old_locus_tag=D1109_09085 NZ_CP031858.1 Protein Homology CDS 1865086 1867098 . + 0 ID=cds-WP_005600131.1;Parent=gene-D1109_RS09070;Dbxref=Genbank:WP_005600131.1;Name=WP_005600131.1;Ontology_term=GO:0006508,GO:0005515,GO:0008236;gbkey=CDS;gene=prc;go_function=protein binding|0005515||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651227.1;locus_tag=D1109_RS09070;product=carboxy terminal-processing peptidase;protein_id=WP_005600131.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1867195 1868760 . + . ID=gene-D1109_RS09075;Name=D1109_RS09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09075;old_locus_tag=D1109_09090 NZ_CP031858.1 Protein Homology CDS 1867195 1868760 . + 0 ID=cds-WP_005600133.1;Parent=gene-D1109_RS09075;Dbxref=Genbank:WP_005600133.1;Name=WP_005600133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600133.1;locus_tag=D1109_RS09075;product=L%2CD-transpeptidase family protein;protein_id=WP_005600133.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1868932 1869486 . + . ID=gene-D1109_RS09080;Name=D1109_RS09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09080;old_locus_tag=D1109_09095 NZ_CP031858.1 Protein Homology CDS 1868932 1869486 . + 0 ID=cds-WP_005595812.1;Parent=gene-D1109_RS09080;Dbxref=Genbank:WP_005595812.1;Name=WP_005595812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651225.1;locus_tag=D1109_RS09080;product=YcbK family protein;protein_id=WP_005595812.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1869504 1870133 . + . ID=gene-D1109_RS09085;Name=D1109_RS09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09085;old_locus_tag=D1109_09100 NZ_CP031858.1 Protein Homology CDS 1869504 1870133 . + 0 ID=cds-WP_005595814.1;Parent=gene-D1109_RS09085;Dbxref=Genbank:WP_005595814.1;Name=WP_005595814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012262706.1;locus_tag=D1109_RS09085;product=MBL fold metallo-hydrolase;protein_id=WP_005595814.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1870136 1870885 . - . ID=gene-D1109_RS09090;Name=D1109_RS09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09090;old_locus_tag=D1109_09105 NZ_CP031858.1 Protein Homology CDS 1870136 1870885 . - 0 ID=cds-WP_005595816.1;Parent=gene-D1109_RS09090;Dbxref=Genbank:WP_005595816.1;Name=WP_005595816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005611235.1;locus_tag=D1109_RS09090;product=LPS biosynthesis choline kinase;protein_id=WP_005595816.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1870882 1871256 . - . ID=gene-D1109_RS09095;Name=D1109_RS09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09095;old_locus_tag=D1109_09110 NZ_CP031858.1 Protein Homology CDS 1870882 1871256 . - 0 ID=cds-WP_005595819.1;Parent=gene-D1109_RS09095;Dbxref=Genbank:WP_005595819.1;Name=WP_005595819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005595819.1;locus_tag=D1109_RS09095;product=YcfL family protein;protein_id=WP_005595819.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1871258 1871623 . - . ID=gene-D1109_RS09100;Name=hinT;gbkey=Gene;gene=hinT;gene_biotype=protein_coding;locus_tag=D1109_RS09100;old_locus_tag=D1109_09115 NZ_CP031858.1 Protein Homology CDS 1871258 1871623 . - 0 ID=cds-WP_005600139.1;Parent=gene-D1109_RS09100;Dbxref=Genbank:WP_005600139.1;Name=WP_005600139.1;gbkey=CDS;gene=hinT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600139.1;locus_tag=D1109_RS09100;product=purine nucleoside phosphoramidase;protein_id=WP_005600139.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1871695 1872525 . - . ID=gene-D1109_RS09105;Name=D1109_RS09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09105;old_locus_tag=D1109_09120 NZ_CP031858.1 Protein Homology CDS 1871695 1872525 . - 0 ID=cds-WP_237586059.1;Parent=gene-D1109_RS09105;Dbxref=Genbank:WP_237586059.1;Name=WP_237586059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600142.1;locus_tag=D1109_RS09105;product=metal ABC transporter permease;protein_id=WP_237586059.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1872518 1873372 . - . ID=gene-D1109_RS09110;Name=D1109_RS09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09110;old_locus_tag=D1109_09125 NZ_CP031858.1 Protein Homology CDS 1872518 1873372 . - 0 ID=cds-WP_005620059.1;Parent=gene-D1109_RS09110;Dbxref=Genbank:WP_005620059.1;Name=WP_005620059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012478291.1;locus_tag=D1109_RS09110;product=metal ABC transporter permease;protein_id=WP_005620059.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1873373 1873966 . - . ID=gene-D1109_RS09115;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=D1109_RS09115;old_locus_tag=D1109_09130 NZ_CP031858.1 Protein Homology CDS 1873373 1873966 . - 0 ID=cds-WP_005620061.1;Parent=gene-D1109_RS09115;Dbxref=Genbank:WP_005620061.1;Name=WP_005620061.1;Ontology_term=GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618717.1;locus_tag=D1109_RS09115;product=ribonuclease HII;protein_id=WP_005620061.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1873989 1875023 . - . ID=gene-D1109_RS09120;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=D1109_RS09120;old_locus_tag=D1109_09135 NZ_CP031858.1 Protein Homology CDS 1873989 1875023 . - 0 ID=cds-WP_005600146.1;Parent=gene-D1109_RS09120;Dbxref=Genbank:WP_005600146.1;Name=WP_005600146.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651218.1;locus_tag=D1109_RS09120;product=small ribosomal subunit biogenesis GTPase RsgA;protein_id=WP_005600146.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1875533 1876423 . + . ID=gene-D1109_RS09125;Name=D1109_RS09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09125;old_locus_tag=D1109_09140 NZ_CP031858.1 Protein Homology CDS 1875533 1876423 . + 0 ID=cds-WP_005606844.1;Parent=gene-D1109_RS09125;Dbxref=Genbank:WP_005606844.1;Name=WP_005606844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005595830.1;locus_tag=D1109_RS09125;product=transcriptional regulator GcvA;protein_id=WP_005606844.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1876423 1877103 . + . ID=gene-D1109_RS09130;Name=yjjG;gbkey=Gene;gene=yjjG;gene_biotype=protein_coding;locus_tag=D1109_RS09130;old_locus_tag=D1109_09145 NZ_CP031858.1 Protein Homology CDS 1876423 1877103 . + 0 ID=cds-WP_005600148.1;Parent=gene-D1109_RS09130;Dbxref=Genbank:WP_005600148.1;Name=WP_005600148.1;Ontology_term=GO:0008253;gbkey=CDS;gene=yjjG;go_function=5'-nucleotidase activity|0008253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600148.1;locus_tag=D1109_RS09130;product=pyrimidine 5'-nucleotidase;protein_id=WP_005600148.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1877103 1878086 . + . ID=gene-D1109_RS09135;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=D1109_RS09135;old_locus_tag=D1109_09150 NZ_CP031858.1 Protein Homology CDS 1877103 1878086 . + 0 ID=cds-WP_237611029.1;Parent=gene-D1109_RS09135;Dbxref=Genbank:WP_237611029.1;Name=WP_237611029.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cysB;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651215.1;locus_tag=D1109_RS09135;product=HTH-type transcriptional regulator CysB;protein_id=WP_237611029.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1878087 1878731 . + . ID=gene-D1109_RS09140;Name=D1109_RS09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09140;old_locus_tag=D1109_09155 NZ_CP031858.1 Protein Homology CDS 1878087 1878731 . + 0 ID=cds-WP_005600150.1;Parent=gene-D1109_RS09140;Dbxref=Genbank:WP_005600150.1;Name=WP_005600150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600150.1;locus_tag=D1109_RS09140;product=hypothetical protein;protein_id=WP_005600150.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1878810 1879859 . - . ID=gene-D1109_RS09145;Name=ansB;gbkey=Gene;gene=ansB;gene_biotype=protein_coding;locus_tag=D1109_RS09145;old_locus_tag=D1109_09160 NZ_CP031858.1 Protein Homology CDS 1878810 1879859 . - 0 ID=cds-WP_237611030.1;Parent=gene-D1109_RS09145;Dbxref=Genbank:WP_237611030.1;Name=WP_237611030.1;Ontology_term=GO:0006528,GO:0004067;gbkey=CDS;gene=ansB;go_function=asparaginase activity|0004067||IEA;go_process=asparagine metabolic process|0006528||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651213.1;locus_tag=D1109_RS09145;product=L-asparaginase 2;protein_id=WP_237611030.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1880163 1881800 . + . ID=gene-D1109_RS09150;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=D1109_RS09150;old_locus_tag=D1109_09165 NZ_CP031858.1 Protein Homology CDS 1880163 1881800 . + 0 ID=cds-WP_005606847.1;Parent=gene-D1109_RS09150;Dbxref=Genbank:WP_005606847.1;Name=WP_005606847.1;Ontology_term=GO:0009220,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005595836.1;locus_tag=D1109_RS09150;product=CTP synthase (glutamine hydrolyzing);protein_id=WP_005606847.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1881903 1882409 . + . ID=gene-D1109_RS09155;Name=D1109_RS09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09155;old_locus_tag=D1109_09170 NZ_CP031858.1 Protein Homology CDS 1881903 1882409 . + 0 ID=cds-WP_005611241.1;Parent=gene-D1109_RS09155;Dbxref=Genbank:WP_005611241.1;Name=WP_005611241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005595838.1;locus_tag=D1109_RS09155;product=DUF2301 domain-containing membrane protein;protein_id=WP_005611241.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1882455 1883057 . - . ID=gene-D1109_RS09160;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=D1109_RS09160;old_locus_tag=D1109_09175 NZ_CP031858.1 Protein Homology CDS 1882455 1883057 . - 0 ID=cds-WP_009875072.1;Parent=gene-D1109_RS09160;Dbxref=Genbank:WP_009875072.1;Name=WP_009875072.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005595839.1;locus_tag=D1109_RS09160;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_009875072.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1883068 1884477 . - . ID=gene-D1109_RS09165;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=D1109_RS09165;old_locus_tag=D1109_09180 NZ_CP031858.1 Protein Homology CDS 1883068 1884477 . - 0 ID=cds-WP_005611245.1;Parent=gene-D1109_RS09165;Dbxref=Genbank:WP_005611245.1;Name=WP_005611245.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991992.1;locus_tag=D1109_RS09165;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_005611245.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1884819 1885934 . + . ID=gene-D1109_RS09170;Name=D1109_RS09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09170;old_locus_tag=D1109_09185 NZ_CP031858.1 Protein Homology CDS 1884819 1885934 . + 0 ID=cds-WP_011848322.1;Parent=gene-D1109_RS09170;Dbxref=Genbank:WP_011848322.1;Name=WP_011848322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011848322.1;locus_tag=D1109_RS09170;product=helix-turn-helix domain-containing protein;protein_id=WP_011848322.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1886062 1887324 . + . ID=gene-D1109_RS09175;Name=D1109_RS09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09175;old_locus_tag=D1109_09190 NZ_CP031858.1 Protein Homology CDS 1886062 1887324 . + 0 ID=cds-WP_009875070.1;Parent=gene-D1109_RS09175;Dbxref=Genbank:WP_009875070.1;Name=WP_009875070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875070.1;locus_tag=D1109_RS09175;product=GntP family permease;protein_id=WP_009875070.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1887335 1888468 . + . ID=gene-D1109_RS09180;Name=D1109_RS09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09180;old_locus_tag=D1109_09195 NZ_CP031858.1 Protein Homology CDS 1887335 1888468 . + 0 ID=cds-WP_237594028.1;Parent=gene-D1109_RS09180;Dbxref=Genbank:WP_237594028.1;Name=WP_237594028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991988.1;locus_tag=D1109_RS09180;product=glycerate kinase;protein_id=WP_237594028.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1888487 1888759 . + . ID=gene-D1109_RS09185;Name=D1109_RS09185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09185;old_locus_tag=D1109_09200 NZ_CP031858.1 Protein Homology CDS 1888487 1888759 . + 0 ID=cds-WP_005595852.1;Parent=gene-D1109_RS09185;Dbxref=Genbank:WP_005595852.1;Name=WP_005595852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991987.1;locus_tag=D1109_RS09185;product=acylphosphatase;protein_id=WP_005595852.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1888830 1890389 . - . ID=gene-D1109_RS09190;Name=D1109_RS09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09190;old_locus_tag=D1109_09205 NZ_CP031858.1 Protein Homology CDS 1888830 1890389 . - 0 ID=cds-WP_005611255.1;Parent=gene-D1109_RS09190;Dbxref=Genbank:WP_005611255.1;Name=WP_005611255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618726.1;locus_tag=D1109_RS09190;product=DUF2813 domain-containing protein;protein_id=WP_005611255.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1890393 1891772 . - . ID=gene-D1109_RS09195;Name=ppnN;gbkey=Gene;gene=ppnN;gene_biotype=protein_coding;locus_tag=D1109_RS09195;old_locus_tag=D1109_09210 NZ_CP031858.1 Protein Homology CDS 1890393 1891772 . - 0 ID=cds-WP_237611031.1;Parent=gene-D1109_RS09195;Dbxref=Genbank:WP_237611031.1;Name=WP_237611031.1;gbkey=CDS;gene=ppnN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012262714.1;locus_tag=D1109_RS09195;product=nucleotide 5'-monophosphate nucleosidase PpnN;protein_id=WP_237611031.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1891832 1892821 . - . ID=gene-D1109_RS09200;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=D1109_RS09200;old_locus_tag=D1109_09215 NZ_CP031858.1 Protein Homology CDS 1891832 1892821 . - 0 ID=cds-WP_009875066.1;Parent=gene-D1109_RS09200;Dbxref=Genbank:WP_009875066.1;Name=WP_009875066.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusA;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875066.1;locus_tag=D1109_RS09200;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=WP_009875066.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1893162 1894139 . + . ID=gene-D1109_RS09205;Name=D1109_RS09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09205;old_locus_tag=D1109_09220 NZ_CP031858.1 Protein Homology CDS 1893162 1894139 . + 0 ID=cds-WP_005600172.1;Parent=gene-D1109_RS09205;Dbxref=Genbank:WP_005600172.1;Name=WP_005600172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251753.1;locus_tag=D1109_RS09205;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=WP_005600172.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1894126 1895790 . + . ID=gene-D1109_RS09210;Name=D1109_RS09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09210;old_locus_tag=D1109_09225 NZ_CP031858.1 Protein Homology CDS 1894126 1895790 . + 0 ID=cds-WP_005600174.1;Parent=gene-D1109_RS09210;Dbxref=Genbank:WP_005600174.1;Name=WP_005600174.1;Ontology_term=GO:0004748;gbkey=CDS;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651197.1;locus_tag=D1109_RS09210;product=ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_005600174.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1895950 1897283 . + . ID=gene-D1109_RS09215;Name=D1109_RS09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09215;old_locus_tag=D1109_09230 NZ_CP031858.1 Protein Homology CDS 1895950 1896403 . + 0 ID=cds-WP_237611032.1;Parent=gene-D1109_RS09215;Dbxref=Genbank:WP_237611032.1;Name=WP_237611032.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612109.1;locus_tag=D1109_RS09215;product=IS3 family transposase;protein_id=WP_237611032.1;transl_table=11 NZ_CP031858.1 Protein Homology CDS 1896403 1897283 . + 2 ID=cds-WP_237611032.1;Parent=gene-D1109_RS09215;Dbxref=Genbank:WP_237611032.1;Name=WP_237611032.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612109.1;locus_tag=D1109_RS09215;product=IS3 family transposase;protein_id=WP_237611032.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1897347 1897946 . - . ID=gene-D1109_RS09220;Name=nfuA;gbkey=Gene;gene=nfuA;gene_biotype=protein_coding;locus_tag=D1109_RS09220;old_locus_tag=D1109_09235 NZ_CP031858.1 Protein Homology CDS 1897347 1897946 . - 0 ID=cds-WP_237611033.1;Parent=gene-D1109_RS09220;Dbxref=Genbank:WP_237611033.1;Name=WP_237611033.1;Ontology_term=GO:0016226,GO:0051604,GO:0051539;gbkey=CDS;gene=nfuA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010944401.1;locus_tag=D1109_RS09220;product=Fe-S biogenesis protein NfuA;protein_id=WP_237611033.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1898401 1899750 . + . ID=gene-D1109_RS09225;Name=D1109_RS09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09225;old_locus_tag=D1109_09240 NZ_CP031858.1 Protein Homology CDS 1898401 1899750 . + 0 ID=cds-WP_237611034.1;Parent=gene-D1109_RS09225;Dbxref=Genbank:WP_237611034.1;Name=WP_237611034.1;Ontology_term=GO:0006814,GO:0016655;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005595863.1;locus_tag=D1109_RS09225;product=Na(+)-translocating NADH-quinone reductase subunit A;protein_id=WP_237611034.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1899755 1900987 . + . ID=gene-D1109_RS09230;Name=D1109_RS09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09230;old_locus_tag=D1109_09245 NZ_CP031858.1 Protein Homology CDS 1899755 1900987 . + 0 ID=cds-WP_005600179.1;Parent=gene-D1109_RS09230;Dbxref=Genbank:WP_005600179.1;Name=WP_005600179.1;Ontology_term=GO:0022904,GO:0055085,GO:0010181,GO:0016655,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=FMN binding|0010181||IEA,oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=respiratory electron transport chain|0022904||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010944403.1;locus_tag=D1109_RS09230;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit B;protein_id=WP_005600179.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1900990 1901763 . + . ID=gene-D1109_RS09235;Name=D1109_RS09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09235;old_locus_tag=D1109_09250 NZ_CP031858.1 Protein Homology CDS 1900990 1901763 . + 0 ID=cds-WP_005595866.1;Parent=gene-D1109_RS09235;Dbxref=Genbank:WP_005595866.1;Name=WP_005595866.1;Ontology_term=GO:0006814,GO:0010181,GO:0016655,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=FMN binding|0010181||IEA,oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651192.1;locus_tag=D1109_RS09235;product=Na(+)-translocating NADH-quinone reductase subunit C;protein_id=WP_005595866.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1901763 1902386 . + . ID=gene-D1109_RS09240;Name=D1109_RS09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09240;old_locus_tag=D1109_09255 NZ_CP031858.1 Protein Homology CDS 1901763 1902386 . + 0 ID=cds-WP_005595868.1;Parent=gene-D1109_RS09240;Dbxref=Genbank:WP_005595868.1;Name=WP_005595868.1;Ontology_term=GO:0016655,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010786252.1;locus_tag=D1109_RS09240;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit D;protein_id=WP_005595868.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1902388 1902984 . + . ID=gene-D1109_RS09245;Name=nqrE;gbkey=Gene;gene=nqrE;gene_biotype=protein_coding;locus_tag=D1109_RS09245;old_locus_tag=D1109_09260 NZ_CP031858.1 Protein Homology CDS 1902388 1902984 . + 0 ID=cds-WP_005595869.1;Parent=gene-D1109_RS09245;Dbxref=Genbank:WP_005595869.1;Name=WP_005595869.1;Ontology_term=GO:0006814,GO:0016655;gbkey=CDS;gene=nqrE;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005529392.1;locus_tag=D1109_RS09245;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit E;protein_id=WP_005595869.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1902995 1904224 . + . ID=gene-D1109_RS09250;Name=nqrF;gbkey=Gene;gene=nqrF;gene_biotype=protein_coding;locus_tag=D1109_RS09250;old_locus_tag=D1109_09265 NZ_CP031858.1 Protein Homology CDS 1902995 1904224 . + 0 ID=cds-WP_005595870.1;Parent=gene-D1109_RS09250;Dbxref=Genbank:WP_005595870.1;Name=WP_005595870.1;Ontology_term=GO:0006814,GO:0016655;gbkey=CDS;gene=nqrF;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651191.1;locus_tag=D1109_RS09250;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit F;protein_id=WP_005595870.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1904431 1905462 . + . ID=gene-D1109_RS09255;Name=D1109_RS09255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09255;old_locus_tag=D1109_09270 NZ_CP031858.1 Protein Homology CDS 1904431 1905462 . + 0 ID=cds-WP_005600183.1;Parent=gene-D1109_RS09255;Dbxref=Genbank:WP_005600183.1;Name=WP_005600183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005614378.1;locus_tag=D1109_RS09255;product=FAD:protein FMN transferase;protein_id=WP_005600183.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1905476 1905721 . + . ID=gene-D1109_RS09260;Name=nqrM;gbkey=Gene;gene=nqrM;gene_biotype=protein_coding;locus_tag=D1109_RS09260;old_locus_tag=D1109_09275 NZ_CP031858.1 Protein Homology CDS 1905476 1905721 . + 0 ID=cds-WP_005595875.1;Parent=gene-D1109_RS09260;Dbxref=Genbank:WP_005595875.1;Name=WP_005595875.1;gbkey=CDS;gene=nqrM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250397.1;locus_tag=D1109_RS09260;product=(Na+)-NQR maturation NqrM;protein_id=WP_005595875.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1905950 1907119 . + . ID=gene-D1109_RS09265;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=D1109_RS09265;old_locus_tag=D1109_09280 NZ_CP031858.1 Protein Homology CDS 1905950 1907119 . + 0 ID=cds-WP_005600185.1;Parent=gene-D1109_RS09265;Dbxref=Genbank:WP_005600185.1;Name=WP_005600185.1;Ontology_term=GO:0002143,GO:0006396,GO:0004808,GO:0016783;gbkey=CDS;gene=mnmA;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity|0004808||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651188.1;locus_tag=D1109_RS09265;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_005600185.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1907193 1908347 . - . ID=gene-D1109_RS09270;Name=D1109_RS09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09270;old_locus_tag=D1109_09285 NZ_CP031858.1 Protein Homology CDS 1907193 1908347 . - 0 ID=cds-WP_237611035.1;Parent=gene-D1109_RS09270;Dbxref=Genbank:WP_237611035.1;Name=WP_237611035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005606869.1;locus_tag=D1109_RS09270;product=3-phenylpropionate MFS transporter;protein_id=WP_237611035.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1908344 1909162 . - . ID=gene-D1109_RS09275;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=D1109_RS09275;old_locus_tag=D1109_09290 NZ_CP031858.1 Protein Homology CDS 1908344 1909162 . - 0 ID=cds-WP_005616631.1;Parent=gene-D1109_RS09275;Dbxref=Genbank:WP_005616631.1;Name=WP_005616631.1;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875061.1;locus_tag=D1109_RS09275;product=pyrroline-5-carboxylate reductase;protein_id=WP_005616631.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1909337 1910245 . + . ID=gene-D1109_RS09280;Name=rdgC;gbkey=Gene;gene=rdgC;gene_biotype=protein_coding;locus_tag=D1109_RS09280;old_locus_tag=D1109_09295 NZ_CP031858.1 Protein Homology CDS 1909337 1910245 . + 0 ID=cds-WP_012478296.1;Parent=gene-D1109_RS09280;Dbxref=Genbank:WP_012478296.1;Name=WP_012478296.1;Ontology_term=GO:0006310;gbkey=CDS;gene=rdgC;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991970.1;locus_tag=D1109_RS09280;product=recombination-associated protein RdgC;protein_id=WP_012478296.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1910255 1910860 . + . ID=gene-D1109_RS09285;Name=D1109_RS09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09285;old_locus_tag=D1109_09300 NZ_CP031858.1 Protein Homology CDS 1910255 1910860 . + 0 ID=cds-WP_005616637.1;Parent=gene-D1109_RS09285;Dbxref=Genbank:WP_005616637.1;Name=WP_005616637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005606873.1;locus_tag=D1109_RS09285;product=beta-phosphoglucomutase family hydrolase;protein_id=WP_005616637.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1911025 1912398 . - . ID=gene-D1109_RS09290;Name=D1109_RS09290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09290;old_locus_tag=D1109_09305 NZ_CP031858.1 Protein Homology CDS 1911025 1912398 . - 0 ID=cds-WP_005606875.1;Parent=gene-D1109_RS09290;Dbxref=Genbank:WP_005606875.1;Name=WP_005606875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005606875.1;locus_tag=D1109_RS09290;product=P-loop NTPase fold protein;protein_id=WP_005606875.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1912528 1914309 . - . ID=gene-D1109_RS09295;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=D1109_RS09295;old_locus_tag=D1109_09310 NZ_CP031858.1 Protein Homology CDS 1912528 1914309 . - 0 ID=cds-WP_005616639.1;Parent=gene-D1109_RS09295;Dbxref=Genbank:WP_005616639.1;Name=WP_005616639.1;gbkey=CDS;gene=nrdD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005611280.1;locus_tag=D1109_RS09295;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=WP_005616639.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1914314 1914781 . - . ID=gene-D1109_RS09300;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=D1109_RS09300;old_locus_tag=D1109_09315 NZ_CP031858.1 Protein Homology CDS 1914314 1914781 . - 0 ID=cds-WP_005616641.1;Parent=gene-D1109_RS09300;Dbxref=Genbank:WP_005616641.1;Name=WP_005616641.1;Ontology_term=GO:0009265,GO:0008998,GO:0043364,GO:0051536;gbkey=CDS;gene=nrdG;go_function=ribonucleoside-triphosphate reductase activity|0008998||IEA,glycyl-radical enzyme activating activity|0043364||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=2'-deoxyribonucleotide biosynthetic process|0009265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875058.1;locus_tag=D1109_RS09300;product=anaerobic ribonucleoside-triphosphate reductase activating protein;protein_id=WP_005616641.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1915163 1915744 . + . ID=gene-D1109_RS09305;Name=rsxA;gbkey=Gene;gene=rsxA;gene_biotype=protein_coding;locus_tag=D1109_RS09305;old_locus_tag=D1109_09320 NZ_CP031858.1 Protein Homology CDS 1915163 1915744 . + 0 ID=cds-WP_005616643.1;Parent=gene-D1109_RS09305;Dbxref=Genbank:WP_005616643.1;Name=WP_005616643.1;Ontology_term=GO:0022900,GO:0016020;gbkey=CDS;gene=rsxA;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007525505.1;locus_tag=D1109_RS09305;product=electron transport complex subunit RsxA;protein_id=WP_005616643.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1915744 1916355 . + . ID=gene-D1109_RS09310;Name=rsxB;gbkey=Gene;gene=rsxB;gene_biotype=protein_coding;locus_tag=D1109_RS09310;old_locus_tag=D1109_09325 NZ_CP031858.1 Protein Homology CDS 1915744 1916355 . + 0 ID=cds-WP_237611036.1;Parent=gene-D1109_RS09310;Dbxref=Genbank:WP_237611036.1;Name=WP_237611036.1;Ontology_term=GO:0022900,GO:0009055,GO:0051536;gbkey=CDS;gene=rsxB;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005595899.1;locus_tag=D1109_RS09310;product=electron transport complex subunit RsxB;protein_id=WP_237611036.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1916348 1918672 . + . ID=gene-D1109_RS09315;Name=rsxC;gbkey=Gene;gene=rsxC;gene_biotype=protein_coding;locus_tag=D1109_RS09315;old_locus_tag=D1109_09330 NZ_CP031858.1 Protein Homology CDS 1916348 1918672 . + 0 ID=cds-WP_237611037.1;Parent=gene-D1109_RS09315;Dbxref=Genbank:WP_237611037.1;Name=WP_237611037.1;Ontology_term=GO:0009055,GO:0051539,GO:0016020;gbkey=CDS;gene=rsxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005616647.1;locus_tag=D1109_RS09315;product=electron transport complex subunit RsxC;protein_id=WP_237611037.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1918665 1919309 . + . ID=gene-D1109_RS09320;Name=D1109_RS09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09320;old_locus_tag=D1109_09335 NZ_CP031858.1 Protein Homology CDS 1918665 1919309 . + 0 ID=cds-WP_005611285.1;Parent=gene-D1109_RS09320;Dbxref=Genbank:WP_005611285.1;Name=WP_005611285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005595904.1;locus_tag=D1109_RS09320;product=trimeric intracellular cation channel family protein;protein_id=WP_005611285.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1919329 1920375 . + . ID=gene-D1109_RS09325;Name=rsxD;gbkey=Gene;gene=rsxD;gene_biotype=protein_coding;locus_tag=D1109_RS09325;old_locus_tag=D1109_09340 NZ_CP031858.1 Protein Homology CDS 1919329 1920375 . + 0 ID=cds-WP_237611038.1;Parent=gene-D1109_RS09325;Dbxref=Genbank:WP_237611038.1;Name=WP_237611038.1;Ontology_term=GO:0022900,GO:0055085,GO:0016021;gbkey=CDS;gene=rsxD;go_component=integral component of membrane|0016021||IEA;go_process=electron transport chain|0022900||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012478298.1;locus_tag=D1109_RS09325;product=electron transport complex subunit RsxD;protein_id=WP_237611038.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1920375 1921007 . + . ID=gene-D1109_RS09330;Name=rsxG;gbkey=Gene;gene=rsxG;gene_biotype=protein_coding;locus_tag=D1109_RS09330;old_locus_tag=D1109_09345 NZ_CP031858.1 Protein Homology CDS 1920375 1921007 . + 0 ID=cds-WP_237611039.1;Parent=gene-D1109_RS09330;Dbxref=Genbank:WP_237611039.1;Name=WP_237611039.1;Ontology_term=GO:0022900,GO:0009055,GO:0010181,GO:0016020;gbkey=CDS;gene=rsxG;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600201.1;locus_tag=D1109_RS09330;product=electron transport complex subunit RsxG;protein_id=WP_237611039.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1921019 1921705 . + . ID=gene-D1109_RS09335;Name=D1109_RS09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09335;old_locus_tag=D1109_09350 NZ_CP031858.1 Protein Homology CDS 1921019 1921705 . + 0 ID=cds-WP_005600203.1;Parent=gene-D1109_RS09335;Dbxref=Genbank:WP_005600203.1;Name=WP_005600203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005624031.1;locus_tag=D1109_RS09335;product=electron transport complex subunit E;protein_id=WP_005600203.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1921714 1922670 . + . ID=gene-D1109_RS09340;Name=lpxM;gbkey=Gene;gene=lpxM;gene_biotype=protein_coding;gene_synonym=msbB;locus_tag=D1109_RS09340;old_locus_tag=D1109_09355 NZ_CP031858.1 Protein Homology CDS 1921714 1922670 . + 0 ID=cds-WP_005620549.1;Parent=gene-D1109_RS09340;Dbxref=Genbank:WP_005620549.1;Name=WP_005620549.1;Note=LpxM is lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase%2C an enzyme characterized in Escherichia coli and involved in biosynthesis of the form of lipid A found in that species and some closely related species.;Ontology_term=GO:0009245,GO:0016746;gbkey=CDS;gene=lpxM;go_function=acyltransferase activity|0016746||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005620549.1;locus_tag=D1109_RS09340;product=lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase;protein_id=WP_005620549.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1922730 1923716 . - . ID=gene-D1109_RS09345;Name=D1109_RS09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09345;old_locus_tag=D1109_09360 NZ_CP031858.1 Protein Homology CDS 1922730 1923716 . - 0 ID=cds-WP_005595914.1;Parent=gene-D1109_RS09345;Dbxref=Genbank:WP_005595914.1;Name=WP_005595914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651611.1;locus_tag=D1109_RS09345;product=amidohydrolase family protein;protein_id=WP_005595914.1;transl_table=11 NZ_CP031858.1 cmsearch riboswitch 1923993 1924089 . + . ID=id-NZ_CP031858.1:1923993..1924089;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP031858.1 RefSeq gene 1924158 1925123 . + . ID=gene-D1109_RS09350;Name=thiB;gbkey=Gene;gene=thiB;gene_biotype=protein_coding;locus_tag=D1109_RS09350;old_locus_tag=D1109_09365 NZ_CP031858.1 Protein Homology CDS 1924158 1925123 . + 0 ID=cds-WP_005600219.1;Parent=gene-D1109_RS09350;Dbxref=Genbank:WP_005600219.1;Name=WP_005600219.1;Ontology_term=GO:0015888,GO:0030974,GO:0030975,GO:0030976,GO:0048502,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=thiB;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=thiamine binding|0030975||IEA,thiamine pyrophosphate binding|0030976||IEA,ABC-type thiamine transporter activity|0048502||IEA;go_process=thiamine transport|0015888||IEA,thiamine pyrophosphate transmembrane transport|0030974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600219.1;locus_tag=D1109_RS09350;product=thiamine ABC transporter substrate binding subunit;protein_id=WP_005600219.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1925330 1925779 . + . ID=gene-D1109_RS09355;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=D1109_RS09355;old_locus_tag=D1109_09370 NZ_CP031858.1 Protein Homology CDS 1925330 1925779 . + 0 ID=cds-WP_005595916.1;Parent=gene-D1109_RS09355;Dbxref=Genbank:WP_005595916.1;Name=WP_005595916.1;Ontology_term=GO:0006355,GO:0019899;gbkey=CDS;gene=dksA;go_function=enzyme binding|0019899||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005595916.1;locus_tag=D1109_RS09355;product=RNA polymerase-binding protein DksA;protein_id=WP_005595916.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1925922 1927454 . + . ID=gene-D1109_RS09360;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=D1109_RS09360;old_locus_tag=D1109_09375 NZ_CP031858.1 Protein Homology CDS 1925922 1927454 . + 0 ID=cds-WP_237611040.1;Parent=gene-D1109_RS09360;Dbxref=Genbank:WP_237611040.1;Name=WP_237611040.1;Ontology_term=GO:0006378,GO:0004652;gbkey=CDS;gene=pcnB;go_function=polynucleotide adenylyltransferase activity|0004652||IEA;go_process=mRNA polyadenylation|0006378||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005603400.1;locus_tag=D1109_RS09360;product=polynucleotide adenylyltransferase PcnB;protein_id=WP_237611040.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1927524 1927994 . + . ID=gene-D1109_RS09365;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=D1109_RS09365;old_locus_tag=D1109_09380 NZ_CP031858.1 Protein Homology CDS 1927524 1927994 . + 0 ID=cds-WP_237611495.1;Parent=gene-D1109_RS09365;Dbxref=Genbank:WP_237611495.1;Name=WP_237611495.1;Ontology_term=GO:0009396,GO:0003848;gbkey=CDS;gene=folK;go_function=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity|0003848||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005620554.1;locus_tag=D1109_RS09365;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_237611495.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1928029 1928250 . - . ID=gene-D1109_RS09370;Name=D1109_RS09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09370;old_locus_tag=D1109_09385 NZ_CP031858.1 Protein Homology CDS 1928029 1928250 . - 0 ID=cds-WP_005595920.1;Parent=gene-D1109_RS09370;Dbxref=Genbank:WP_005595920.1;Name=WP_005595920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005606896.1;locus_tag=D1109_RS09370;product=YnbE family lipoprotein;protein_id=WP_005595920.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1928247 1930976 . - . ID=gene-D1109_RS09375;Name=D1109_RS09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09375;old_locus_tag=D1109_09390 NZ_CP031858.1 Protein Homology CDS 1928247 1930976 . - 0 ID=cds-WP_237611041.1;Parent=gene-D1109_RS09375;Dbxref=Genbank:WP_237611041.1;Name=WP_237611041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005606898.1;locus_tag=D1109_RS09375;product=YdbH family protein;protein_id=WP_237611041.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1930976 1931800 . - . ID=gene-D1109_RS09380;Name=D1109_RS09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09380;old_locus_tag=D1109_09395 NZ_CP031858.1 Protein Homology CDS 1930976 1931800 . - 0 ID=cds-WP_237611042.1;Parent=gene-D1109_RS09380;Dbxref=Genbank:WP_237611042.1;Name=WP_237611042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005624419.1;locus_tag=D1109_RS09380;product=hypothetical protein;protein_id=WP_237611042.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1931894 1932301 . + . ID=gene-D1109_RS09385;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=D1109_RS09385;old_locus_tag=D1109_09400 NZ_CP031858.1 Protein Homology CDS 1931894 1932301 . + 0 ID=cds-WP_009875026.1;Parent=gene-D1109_RS09385;Dbxref=Genbank:WP_009875026.1;Name=WP_009875026.1;Ontology_term=GO:0005975,GO:0051596,GO:0004462;gbkey=CDS;gene=gloA;go_function=lactoylglutathione lyase activity|0004462||IEA;go_process=carbohydrate metabolic process|0005975||IEA,methylglyoxal catabolic process|0051596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875026.1;locus_tag=D1109_RS09385;product=lactoylglutathione lyase;protein_id=WP_009875026.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1932441 1933097 . + . ID=gene-D1109_RS09390;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=protein_coding;locus_tag=D1109_RS09390;old_locus_tag=D1109_09405 NZ_CP031858.1 Protein Homology CDS 1932441 1933097 . + 0 ID=cds-WP_005606905.1;Parent=gene-D1109_RS09390;Dbxref=Genbank:WP_005606905.1;Name=WP_005606905.1;Ontology_term=GO:0006364,GO:0042780,GO:0016896;gbkey=CDS;gene=rnt;go_function=exoribonuclease activity%2C producing 5'-phosphomonoesters|0016896||IEA;go_process=rRNA processing|0006364||IEA,tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005595932.1;locus_tag=D1109_RS09390;product=ribonuclease T;protein_id=WP_005606905.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1933188 1934465 . - . ID=gene-D1109_RS09395;Name=D1109_RS09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09395;old_locus_tag=D1109_09410 NZ_CP031858.1 Protein Homology CDS 1933188 1934465 . - 0 ID=cds-WP_005614397.1;Parent=gene-D1109_RS09395;Dbxref=Genbank:WP_005614397.1;Name=WP_005614397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005614397.1;locus_tag=D1109_RS09395;product=divalent metal cation transporter;protein_id=WP_005614397.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1935041 1936162 . - . ID=gene-D1109_RS09400;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=D1109_RS09400;old_locus_tag=D1109_09415 NZ_CP031858.1 Protein Homology CDS 1935041 1936162 . - 0 ID=cds-WP_005595936.1;Parent=gene-D1109_RS09400;Dbxref=Genbank:WP_005595936.1;Name=WP_005595936.1;Ontology_term=GO:0006571,GO:0046417,GO:0004106,GO:0004665,GO:0008977;gbkey=CDS;gene=tyrA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydrogenase (NADP+) activity|0004665||IEA,prephenate dehydrogenase (NAD+) activity|0008977||IEA;go_process=tyrosine biosynthetic process|0006571||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875025.1;locus_tag=D1109_RS09400;product=bifunctional chorismate mutase/prephenate dehydrogenase;protein_id=WP_005595936.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1936275 1937336 . - . ID=gene-D1109_RS09405;Name=D1109_RS09405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09405;old_locus_tag=D1109_09420 NZ_CP031858.1 Protein Homology CDS 1936275 1937336 . - 0 ID=cds-WP_005600235.1;Parent=gene-D1109_RS09405;Dbxref=Genbank:WP_005600235.1;Name=WP_005600235.1;Ontology_term=GO:0009423,GO:0003849;gbkey=CDS;go_function=3-deoxy-7-phosphoheptulonate synthase activity|0003849||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600235.1;locus_tag=D1109_RS09405;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=WP_005600235.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1937378 1938424 . - . ID=gene-D1109_RS09410;Name=D1109_RS09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09410;old_locus_tag=D1109_09425 NZ_CP031858.1 Protein Homology CDS 1937378 1938424 . - 0 ID=cds-WP_237611043.1;Parent=gene-D1109_RS09410;Dbxref=Genbank:WP_237611043.1;Name=WP_237611043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600238.1;locus_tag=D1109_RS09410;product=glycosyltransferase family 9 protein;protein_id=WP_237611043.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1938512 1939951 . - . ID=gene-D1109_RS09415;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=D1109_RS09415;old_locus_tag=D1109_09430 NZ_CP031858.1 Protein Homology CDS 1938512 1939951 . - 0 ID=cds-WP_005618753.1;Parent=gene-D1109_RS09415;Dbxref=Genbank:WP_005618753.1;Name=WP_005618753.1;Ontology_term=GO:0006096,GO:0004743;gbkey=CDS;gene=pyk;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005818583.1;locus_tag=D1109_RS09415;product=pyruvate kinase;protein_id=WP_005618753.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1940083 1940574 . + . ID=gene-D1109_RS09420;Name=sixA;gbkey=Gene;gene=sixA;gene_biotype=protein_coding;locus_tag=D1109_RS09420;old_locus_tag=D1109_09435 NZ_CP031858.1 Protein Homology CDS 1940083 1940574 . + 0 ID=cds-WP_237611044.1;Parent=gene-D1109_RS09420;Dbxref=Genbank:WP_237611044.1;Name=WP_237611044.1;Ontology_term=GO:0000160,GO:0101006;gbkey=CDS;gene=sixA;go_function=protein histidine phosphatase activity|0101006||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005595945.1;locus_tag=D1109_RS09420;product=phosphohistidine phosphatase SixA;protein_id=WP_237611044.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1940797 1941759 . + . ID=gene-D1109_RS09425;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=D1109_RS09425;old_locus_tag=D1109_09440 NZ_CP031858.1 Protein Homology CDS 1940797 1941759 . + 0 ID=cds-WP_237611045.1;Parent=gene-D1109_RS09425;Dbxref=Genbank:WP_237611045.1;Name=WP_237611045.1;Ontology_term=GO:0008033,GO:0003824,GO:0016491,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=catalytic activity|0003824||IEA,oxidoreductase activity|0016491||IEA,tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005611312.1;locus_tag=D1109_RS09425;product=tRNA dihydrouridine synthase DusB;protein_id=WP_237611045.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1941787 1942083 . + . ID=gene-D1109_RS09430;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=D1109_RS09430;old_locus_tag=D1109_09445 NZ_CP031858.1 Protein Homology CDS 1941787 1942083 . + 0 ID=cds-WP_005595953.1;Parent=gene-D1109_RS09430;Dbxref=Genbank:WP_005595953.1;Name=WP_005595953.1;gbkey=CDS;gene=fis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011199710.1;locus_tag=D1109_RS09430;product=DNA-binding transcriptional regulator Fis;protein_id=WP_005595953.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1942148 1943506 . - . ID=gene-D1109_RS09435;Name=D1109_RS09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09435;old_locus_tag=D1109_09450 NZ_CP031858.1 Protein Homology CDS 1942148 1943506 . - 0 ID=cds-WP_237611046.1;Parent=gene-D1109_RS09435;Dbxref=Genbank:WP_237611046.1;Name=WP_237611046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005603424.1;locus_tag=D1109_RS09435;product=sodium-dependent transporter;protein_id=WP_237611046.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1943571 1944404 . - . ID=gene-D1109_RS09440;Name=D1109_RS09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09440;old_locus_tag=D1109_09455 NZ_CP031858.1 Protein Homology CDS 1943571 1944404 . - 0 ID=cds-WP_005600245.1;Parent=gene-D1109_RS09440;Dbxref=Genbank:WP_005600245.1;Name=WP_005600245.1;Ontology_term=GO:0006306,GO:0009007;gbkey=CDS;go_function=site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA methylation|0006306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005595957.1;locus_tag=D1109_RS09440;product=Dam family site-specific DNA-(adenine-N6)-methyltransferase;protein_id=WP_005600245.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1944397 1945497 . - . ID=gene-D1109_RS09445;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=D1109_RS09445;old_locus_tag=D1109_09460 NZ_CP031858.1 Protein Homology CDS 1944397 1945497 . - 0 ID=cds-WP_039708936.1;Parent=gene-D1109_RS09445;Dbxref=Genbank:WP_039708936.1;Name=WP_039708936.1;Ontology_term=GO:0009423,GO:0003856;gbkey=CDS;gene=aroB;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005611318.1;locus_tag=D1109_RS09445;product=3-dehydroquinate synthase;protein_id=WP_039708936.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1945571 1946092 . - . ID=gene-D1109_RS09450;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=D1109_RS09450;old_locus_tag=D1109_09465 NZ_CP031858.1 Protein Homology CDS 1945571 1946092 . - 0 ID=cds-WP_005618763.1;Parent=gene-D1109_RS09450;Dbxref=Genbank:WP_005618763.1;Name=WP_005618763.1;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005710312.1;locus_tag=D1109_RS09450;product=shikimate kinase AroK;protein_id=WP_005618763.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1946354 1948921 . - . ID=gene-D1109_RS09455;Name=D1109_RS09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09455;old_locus_tag=D1109_09470 NZ_CP031858.1 Protein Homology CDS 1946354 1948921 . - 0 ID=cds-WP_237592889.1;Parent=gene-D1109_RS09455;Dbxref=Genbank:WP_237592889.1;Name=WP_237592889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005614417.1;locus_tag=D1109_RS09455;product=penicillin-binding protein 1A;protein_id=WP_237592889.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1949060 1949740 . + . ID=gene-D1109_RS09460;Name=D1109_RS09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09460;old_locus_tag=D1109_09475 NZ_CP031858.1 Protein Homology CDS 1949060 1949740 . + 0 ID=cds-WP_237611047.1;Parent=gene-D1109_RS09460;Dbxref=Genbank:WP_237611047.1;Name=WP_237611047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875022.1;locus_tag=D1109_RS09460;product=pilus assembly protein PilM;protein_id=WP_237611047.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1949722 1950243 . + . ID=gene-D1109_RS09465;Name=D1109_RS09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09465;old_locus_tag=D1109_09480 NZ_CP031858.1 Protein Homology CDS 1949722 1950243 . + 0 ID=cds-WP_237611048.1;Parent=gene-D1109_RS09465;Dbxref=Genbank:WP_237611048.1;Name=WP_237611048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005595970.1;locus_tag=D1109_RS09465;product=hypothetical protein;protein_id=WP_237611048.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1950342 1950773 . + . ID=gene-D1109_RS09470;Name=D1109_RS09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09470;old_locus_tag=D1109_09485 NZ_CP031858.1 Protein Homology CDS 1950342 1950773 . + 0 ID=cds-WP_005595972.1;Parent=gene-D1109_RS09470;Dbxref=Genbank:WP_005595972.1;Name=WP_005595972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875020.1;locus_tag=D1109_RS09470;product=hypothetical protein;protein_id=WP_005595972.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1950766 1951170 . + . ID=gene-D1109_RS09475;Name=D1109_RS09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09475;old_locus_tag=D1109_09490 NZ_CP031858.1 Protein Homology CDS 1950766 1951170 . + 0 ID=cds-WP_237611049.1;Parent=gene-D1109_RS09475;Dbxref=Genbank:WP_237611049.1;Name=WP_237611049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005595974.1;locus_tag=D1109_RS09475;product=hypothetical protein;protein_id=WP_237611049.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1951182 1952480 . + . ID=gene-D1109_RS09480;Name=pilQ;gbkey=Gene;gene=pilQ;gene_biotype=protein_coding;locus_tag=D1109_RS09480;old_locus_tag=D1109_09495 NZ_CP031858.1 Protein Homology CDS 1951182 1952480 . + 0 ID=cds-WP_005613635.1;Parent=gene-D1109_RS09480;Dbxref=Genbank:WP_005613635.1;Name=WP_005613635.1;Ontology_term=GO:0009297,GO:0009306;gbkey=CDS;gene=pilQ;go_process=pilus assembly|0009297||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005614439.1;locus_tag=D1109_RS09480;product=type IV pilus secretin PilQ;protein_id=WP_005613635.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1952606 1953019 . + . ID=gene-D1109_RS09485;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=D1109_RS09485;old_locus_tag=D1109_09500 NZ_CP031858.1 Protein Homology CDS 1952606 1953019 . + 0 ID=cds-WP_237611050.1;Parent=gene-D1109_RS09485;Dbxref=Genbank:WP_237611050.1;Name=WP_237611050.1;Ontology_term=GO:0006355;gbkey=CDS;gene=nusB;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652638.1;locus_tag=D1109_RS09485;product=transcription antitermination factor NusB;protein_id=WP_237611050.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1953084 1954049 . + . ID=gene-D1109_RS09490;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=D1109_RS09490;old_locus_tag=D1109_09505 NZ_CP031858.1 Protein Homology CDS 1953084 1954049 . + 0 ID=cds-WP_005618774.1;Parent=gene-D1109_RS09490;Dbxref=Genbank:WP_005618774.1;Name=WP_005618774.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012478303.1;locus_tag=D1109_RS09490;product=thiamine-phosphate kinase;protein_id=WP_005618774.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1954062 1954535 . + . ID=gene-D1109_RS09495;Name=D1109_RS09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09495;old_locus_tag=D1109_09510 NZ_CP031858.1 Protein Homology CDS 1954062 1954535 . + 0 ID=cds-WP_005595983.1;Parent=gene-D1109_RS09495;Dbxref=Genbank:WP_005595983.1;Name=WP_005595983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005595983.1;locus_tag=D1109_RS09495;product=phosphatidylglycerophosphatase A;protein_id=WP_005595983.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1954544 1955170 . + . ID=gene-D1109_RS09500;Name=D1109_RS09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09500;old_locus_tag=D1109_09515 NZ_CP031858.1 Protein Homology CDS 1954544 1955170 . + 0 ID=cds-WP_237611051.1;Parent=gene-D1109_RS09500;Dbxref=Genbank:WP_237611051.1;Name=WP_237611051.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005606921.1;locus_tag=D1109_RS09500;product=LysE family transporter;protein_id=WP_237611051.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1955232 1956269 . - . ID=gene-D1109_RS09505;Name=D1109_RS09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09505;old_locus_tag=D1109_09520 NZ_CP031858.1 Protein Homology CDS 1955232 1956269 . - 0 ID=cds-WP_237611052.1;Parent=gene-D1109_RS09505;Dbxref=Genbank:WP_237611052.1;Name=WP_237611052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005603442.1;locus_tag=D1109_RS09505;product=rRNA methyltransferase;protein_id=WP_237611052.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1956435 1957247 . + . ID=gene-D1109_RS09510;Name=suhB;gbkey=Gene;gene=suhB;gene_biotype=protein_coding;locus_tag=D1109_RS09510;old_locus_tag=D1109_09525 NZ_CP031858.1 Protein Homology CDS 1956435 1957247 . + 0 ID=cds-WP_005595989.1;Parent=gene-D1109_RS09510;Dbxref=Genbank:WP_005595989.1;Name=WP_005595989.1;Ontology_term=GO:0046854,GO:0046855,GO:0008934;gbkey=CDS;gene=suhB;go_function=inositol monophosphate 1-phosphatase activity|0008934||IEA;go_process=phosphatidylinositol phosphate biosynthetic process|0046854||IEA,inositol phosphate dephosphorylation|0046855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010944457.1;locus_tag=D1109_RS09510;product=inositol-1-monophosphatase;protein_id=WP_005595989.1;transl_table=11 NZ_CP031858.1 RefSeq pseudogene 1957368 1959215 . + . ID=gene-D1109_RS09515;Name=dxs;end_range=1959215,.;gbkey=Gene;gene=dxs;gene_biotype=pseudogene;locus_tag=D1109_RS09515;old_locus_tag=D1109_09530;partial=true;pseudo=true NZ_CP031858.1 Protein Homology CDS 1957368 1959215 . + 0 ID=cds-D1109_RS09515;Parent=gene-D1109_RS09515;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661;end_range=1959215,.;gbkey=CDS;gene=dxs;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010944458.1;locus_tag=D1109_RS09515;partial=true;product=1-deoxy-D-xylulose-5-phosphate synthase;pseudo=true;transl_table=11 NZ_CP031858.1 RefSeq gene 1959332 1960665 . - . ID=gene-D1109_RS09520;Name=D1109_RS09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09520;old_locus_tag=D1109_09535 NZ_CP031858.1 Protein Homology CDS 1960212 1960665 . - 0 ID=cds-WP_237611053.1;Parent=gene-D1109_RS09520;Dbxref=Genbank:WP_237611053.1;Name=WP_237611053.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612109.1;locus_tag=D1109_RS09520;product=IS3 family transposase;protein_id=WP_237611053.1;transl_table=11 NZ_CP031858.1 Protein Homology CDS 1959332 1960212 . - 2 ID=cds-WP_237611053.1;Parent=gene-D1109_RS09520;Dbxref=Genbank:WP_237611053.1;Name=WP_237611053.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612109.1;locus_tag=D1109_RS09520;product=IS3 family transposase;protein_id=WP_237611053.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1960754 1962019 . - . ID=gene-D1109_RS09525;Name=D1109_RS09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09525;old_locus_tag=D1109_09540 NZ_CP031858.1 Protein Homology CDS 1960754 1962019 . - 0 ID=cds-WP_005596003.1;Parent=gene-D1109_RS09525;Dbxref=Genbank:WP_005596003.1;Name=WP_005596003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005631268.1;locus_tag=D1109_RS09525;product=serine hydroxymethyltransferase;protein_id=WP_005596003.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1962250 1963137 . - . ID=gene-D1109_RS09530;Name=D1109_RS09530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09530;old_locus_tag=D1109_09545 NZ_CP031858.1 Protein Homology CDS 1962250 1963137 . - 0 ID=cds-WP_005603453.1;Parent=gene-D1109_RS09530;Dbxref=Genbank:WP_005603453.1;Name=WP_005603453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005603453.1;locus_tag=D1109_RS09530;product=NAD(+) kinase;protein_id=WP_005603453.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1963228 1966575 . - . ID=gene-D1109_RS09535;Name=cas3f;gbkey=Gene;gene=cas3f;gene_biotype=protein_coding;locus_tag=D1109_RS09535;old_locus_tag=D1109_09550 NZ_CP031858.1 Protein Homology CDS 1963228 1966575 . - 0 ID=cds-WP_237611054.1;Parent=gene-D1109_RS09535;Dbxref=Genbank:WP_237611054.1;Name=WP_237611054.1;Ontology_term=GO:0043571,GO:0004386;gbkey=CDS;gene=cas3f;go_function=helicase activity|0004386||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005616678.1;locus_tag=D1109_RS09535;product=type I-F CRISPR-associated helicase Cas3f;protein_id=WP_237611054.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1966572 1967528 . - . ID=gene-D1109_RS09540;Name=cas1f;gbkey=Gene;gene=cas1f;gene_biotype=protein_coding;locus_tag=D1109_RS09540;old_locus_tag=D1109_09555 NZ_CP031858.1 Protein Homology CDS 1966572 1967528 . - 0 ID=cds-WP_005600274.1;Parent=gene-D1109_RS09540;Dbxref=Genbank:WP_005600274.1;Name=WP_005600274.1;Ontology_term=GO:0043571,GO:0004520;gbkey=CDS;gene=cas1f;go_function=endodeoxyribonuclease activity|0004520||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005603457.1;locus_tag=D1109_RS09540;product=type I-F CRISPR-associated endonuclease Cas1f;protein_id=WP_005600274.1;transl_table=11 NZ_CP031858.1 RefSeq direct_repeat 1967565 1968313 . + . ID=id-NZ_CP031858.1:1967565..1968313;gbkey=repeat_region;inference=COORDINATES: alignment:pilercr:v1.02;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=1967625..1967652;rpt_unit_seq=tttctaagctgcctatacggcagtgaag NZ_CP031858.1 RefSeq gene 1968456 1969025 . - . ID=gene-D1109_RS09545;Name=cas6f;gbkey=Gene;gene=cas6f;gene_biotype=protein_coding;locus_tag=D1109_RS09545;old_locus_tag=D1109_09560 NZ_CP031858.1 Protein Homology CDS 1968456 1969025 . - 0 ID=cds-WP_005600275.1;Parent=gene-D1109_RS09545;Dbxref=Genbank:WP_005600275.1;Name=WP_005600275.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas6f;go_function=endoribonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005616685.1;locus_tag=D1109_RS09545;product=type I-F CRISPR-associated endoribonuclease Cas6/Csy4;protein_id=WP_005600275.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1969028 1970023 . - . ID=gene-D1109_RS09550;Name=csy3;gbkey=Gene;gene=csy3;gene_biotype=protein_coding;locus_tag=D1109_RS09550;old_locus_tag=D1109_09565 NZ_CP031858.1 Protein Homology CDS 1969028 1970023 . - 0 ID=cds-WP_237611055.1;Parent=gene-D1109_RS09550;Dbxref=Genbank:WP_237611055.1;Name=WP_237611055.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=csy3;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012262738.1;locus_tag=D1109_RS09550;product=type I-F CRISPR-associated protein Csy3;protein_id=WP_237611055.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1970025 1970984 . - . ID=gene-D1109_RS09555;Name=csy2;gbkey=Gene;gene=csy2;gene_biotype=protein_coding;locus_tag=D1109_RS09555;old_locus_tag=D1109_09570 NZ_CP031858.1 Protein Homology CDS 1970025 1970984 . - 0 ID=cds-WP_237611056.1;Parent=gene-D1109_RS09555;Dbxref=Genbank:WP_237611056.1;Name=WP_237611056.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=csy2;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005606941.1;locus_tag=D1109_RS09555;product=type I-F CRISPR-associated protein Csy2;protein_id=WP_237611056.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1970981 1972330 . - . ID=gene-D1109_RS09560;Name=csy1;gbkey=Gene;gene=csy1;gene_biotype=protein_coding;locus_tag=D1109_RS09560;old_locus_tag=D1109_09575 NZ_CP031858.1 Protein Homology CDS 1970981 1972330 . - 0 ID=cds-WP_237611057.1;Parent=gene-D1109_RS09560;Dbxref=Genbank:WP_237611057.1;Name=WP_237611057.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=csy1;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005616691.1;locus_tag=D1109_RS09560;product=type I-F CRISPR-associated protein Csy1;protein_id=WP_237611057.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1972778 1974709 . + . ID=gene-D1109_RS09565;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=D1109_RS09565;old_locus_tag=D1109_09580 NZ_CP031858.1 Protein Homology CDS 1972778 1974709 . + 0 ID=cds-WP_237611058.1;Parent=gene-D1109_RS09565;Dbxref=Genbank:WP_237611058.1;Name=WP_237611058.1;Ontology_term=GO:0006435,GO:0004829;gbkey=CDS;gene=thrS;go_function=threonine-tRNA ligase activity|0004829||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011200229.1;locus_tag=D1109_RS09565;product=threonine--tRNA ligase;protein_id=WP_237611058.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1974851 1975525 . + . ID=gene-D1109_RS09570;Name=D1109_RS09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09570;old_locus_tag=D1109_09585 NZ_CP031858.1 Protein Homology CDS 1974851 1975525 . + 0 ID=cds-WP_005596031.1;Parent=gene-D1109_RS09570;Dbxref=Genbank:WP_005596031.1;Name=WP_005596031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596031.1;locus_tag=D1109_RS09570;product=CsgG/HfaB family protein;protein_id=WP_005596031.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1975535 1975882 . + . ID=gene-D1109_RS09575;Name=D1109_RS09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09575;old_locus_tag=D1109_09590 NZ_CP031858.1 Protein Homology CDS 1975535 1975882 . + 0 ID=cds-WP_011848337.1;Parent=gene-D1109_RS09575;Dbxref=Genbank:WP_011848337.1;Name=WP_011848337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011848337.1;locus_tag=D1109_RS09575;product=DUF4810 domain-containing protein;protein_id=WP_011848337.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1975894 1976553 . + . ID=gene-D1109_RS09580;Name=D1109_RS09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09580;old_locus_tag=D1109_09595 NZ_CP031858.1 Protein Homology CDS 1975894 1976553 . + 0 ID=cds-WP_005620909.1;Parent=gene-D1109_RS09580;Dbxref=Genbank:WP_005620909.1;Name=WP_005620909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596036.1;locus_tag=D1109_RS09580;product=DUF799 domain-containing protein;protein_id=WP_005620909.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1976768 1977310 . + . ID=gene-D1109_RS09585;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=D1109_RS09585;old_locus_tag=D1109_09600 NZ_CP031858.1 Protein Homology CDS 1976768 1977310 . + 0 ID=cds-WP_080515067.1;Parent=gene-D1109_RS09585;Dbxref=Genbank:WP_080515067.1;Name=WP_080515067.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010869182.1;locus_tag=D1109_RS09585;product=translation initiation factor IF-3;protein_id=WP_080515067.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1977559 1977756 . + . ID=gene-D1109_RS09590;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=D1109_RS09590;old_locus_tag=D1109_09605 NZ_CP031858.1 Protein Homology CDS 1977559 1977756 . + 0 ID=cds-WP_005596065.1;Parent=gene-D1109_RS09590;Dbxref=Genbank:WP_005596065.1;Name=WP_005596065.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmI;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708231.1;locus_tag=D1109_RS09590;product=50S ribosomal protein L35;protein_id=WP_005596065.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1977824 1978177 . + . ID=gene-D1109_RS09595;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=D1109_RS09595;old_locus_tag=D1109_09610 NZ_CP031858.1 Protein Homology CDS 1977824 1978177 . + 0 ID=cds-WP_005596075.1;Parent=gene-D1109_RS09595;Dbxref=Genbank:WP_005596075.1;Name=WP_005596075.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplT;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013745267.1;locus_tag=D1109_RS09595;product=50S ribosomal protein L20;protein_id=WP_005596075.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1978466 1978762 . + . ID=gene-D1109_RS09600;Name=D1109_RS09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09600 NZ_CP031858.1 GeneMarkS-2+ CDS 1978466 1978762 . + 0 ID=cds-WP_005611361.1;Parent=gene-D1109_RS09600;Dbxref=Genbank:WP_005611361.1;Name=WP_005611361.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=D1109_RS09600;product=hypothetical protein;protein_id=WP_005611361.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1978795 1979088 . + . ID=gene-D1109_RS09605;Name=D1109_RS09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09605;old_locus_tag=D1109_09620 NZ_CP031858.1 Protein Homology CDS 1978795 1979088 . + 0 ID=cds-WP_237611059.1;Parent=gene-D1109_RS09605;Dbxref=Genbank:WP_237611059.1;Name=WP_237611059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875007.1;locus_tag=D1109_RS09605;product=hypothetical protein;protein_id=WP_237611059.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1979145 1980440 . - . ID=gene-D1109_RS09610;Name=D1109_RS09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09610;old_locus_tag=D1109_09625 NZ_CP031858.1 Protein Homology CDS 1979145 1980440 . - 0 ID=cds-WP_005600282.1;Parent=gene-D1109_RS09610;Dbxref=Genbank:WP_005600282.1;Name=WP_005600282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005611362.1;locus_tag=D1109_RS09610;product=hemolysin family protein;protein_id=WP_005600282.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1980484 1981134 . - . ID=gene-D1109_RS09615;Name=D1109_RS09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09615;old_locus_tag=D1109_09630 NZ_CP031858.1 Protein Homology CDS 1980484 1981134 . - 0 ID=cds-WP_005596082.1;Parent=gene-D1109_RS09615;Dbxref=Genbank:WP_005596082.1;Name=WP_005596082.1;Ontology_term=GO:0001522,GO:0004730;gbkey=CDS;go_function=pseudouridylate synthase activity|0004730||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005614494.1;locus_tag=D1109_RS09615;product=TIGR01621 family pseudouridine synthase;protein_id=WP_005596082.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1981184 1981816 . + . ID=gene-D1109_RS09620;Name=D1109_RS09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09620;old_locus_tag=D1109_09635 NZ_CP031858.1 Protein Homology CDS 1981184 1981816 . + 0 ID=cds-WP_005596084.1;Parent=gene-D1109_RS09620;Dbxref=Genbank:WP_005596084.1;Name=WP_005596084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596084.1;locus_tag=D1109_RS09620;product=histidine phosphatase family protein;protein_id=WP_005596084.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1981883 1982296 . - . ID=gene-D1109_RS09625;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=D1109_RS09625;old_locus_tag=D1109_09640 NZ_CP031858.1 Protein Homology CDS 1981883 1982296 . - 0 ID=cds-WP_005596085.1;Parent=gene-D1109_RS09625;Dbxref=Genbank:WP_005596085.1;Name=WP_005596085.1;Ontology_term=GO:0008150,GO:0003674;gbkey=CDS;gene=ruvX;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005623441.1;locus_tag=D1109_RS09625;product=Holliday junction resolvase RuvX;protein_id=WP_005596085.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1982349 1982909 . - . ID=gene-D1109_RS09630;Name=D1109_RS09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09630;old_locus_tag=D1109_09645 NZ_CP031858.1 Protein Homology CDS 1982349 1982909 . - 0 ID=cds-WP_005596086.1;Parent=gene-D1109_RS09630;Dbxref=Genbank:WP_005596086.1;Name=WP_005596086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991139.1;locus_tag=D1109_RS09630;product=YqgE/AlgH family protein;protein_id=WP_005596086.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1982909 1983640 . - . ID=gene-D1109_RS09635;Name=rsmE;gbkey=Gene;gene=rsmE;gene_biotype=protein_coding;locus_tag=D1109_RS09635;old_locus_tag=D1109_09650 NZ_CP031858.1 Protein Homology CDS 1982909 1983640 . - 0 ID=cds-WP_005600286.1;Parent=gene-D1109_RS09635;Dbxref=Genbank:WP_005600286.1;Name=WP_005600286.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rsmE;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007524366.1;locus_tag=D1109_RS09635;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_005600286.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1983815 1984405 . - . ID=gene-D1109_RS09640;Name=D1109_RS09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09640;old_locus_tag=D1109_09655 NZ_CP031858.1 Protein Homology CDS 1983815 1984405 . - 0 ID=cds-WP_005596088.1;Parent=gene-D1109_RS09640;Dbxref=Genbank:WP_005596088.1;Name=WP_005596088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012262747.1;locus_tag=D1109_RS09640;product=YajG family lipoprotein;protein_id=WP_005596088.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1984534 1984845 . + . ID=gene-D1109_RS09645;Name=D1109_RS09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09645;old_locus_tag=D1109_09660 NZ_CP031858.1 Protein Homology CDS 1984534 1984845 . + 0 ID=cds-WP_005596090.1;Parent=gene-D1109_RS09645;Dbxref=Genbank:WP_005596090.1;Name=WP_005596090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600288.1;locus_tag=D1109_RS09645;product=BolA/IbaG family iron-sulfur metabolism protein;protein_id=WP_005596090.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1984957 1985046 . + . ID=gene-D1109_RS09650;Name=D1109_RS09650;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS09650;old_locus_tag=D1109_09665 NZ_CP031858.1 tRNAscan-SE tRNA 1984957 1985046 . + . ID=rna-D1109_RS09650;Parent=gene-D1109_RS09650;anticodon=(pos:1984991..1984993);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS09650;product=tRNA-Ser NZ_CP031858.1 tRNAscan-SE exon 1984957 1985046 . + . ID=exon-D1109_RS09650-1;Parent=rna-D1109_RS09650;anticodon=(pos:1984991..1984993);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS09650;product=tRNA-Ser NZ_CP031858.1 RefSeq gene 1985238 1985612 . - . ID=gene-D1109_RS09655;Name=D1109_RS09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09655;old_locus_tag=D1109_09670 NZ_CP031858.1 Protein Homology CDS 1985238 1985612 . - 0 ID=cds-WP_005603483.1;Parent=gene-D1109_RS09655;Dbxref=Genbank:WP_005603483.1;Name=WP_005603483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600290.1;locus_tag=D1109_RS09655;product=copper resistance protein NlpE;protein_id=WP_005603483.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1985632 1985940 . - . ID=gene-D1109_RS09660;Name=D1109_RS09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09660;old_locus_tag=D1109_09675 NZ_CP031858.1 Protein Homology CDS 1985632 1985940 . - 0 ID=cds-WP_009875331.1;Parent=gene-D1109_RS09660;Dbxref=Genbank:WP_009875331.1;Name=WP_009875331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875331.1;locus_tag=D1109_RS09660;product=DciA family protein;protein_id=WP_009875331.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1986043 1986369 . + . ID=gene-D1109_RS09665;Name=secM;gbkey=Gene;gene=secM;gene_biotype=protein_coding;locus_tag=D1109_RS09665;old_locus_tag=D1109_09680 NZ_CP031858.1 Protein Homology CDS 1986043 1986369 . + 0 ID=cds-WP_005600295.1;Parent=gene-D1109_RS09665;Dbxref=Genbank:WP_005600295.1;Name=WP_005600295.1;gbkey=CDS;gene=secM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600295.1;locus_tag=D1109_RS09665;product=secA translation cis-regulator SecM;protein_id=WP_005600295.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1986478 1989195 . + . ID=gene-D1109_RS09670;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=D1109_RS09670;old_locus_tag=D1109_09685 NZ_CP031858.1 Protein Homology CDS 1986478 1989195 . + 0 ID=cds-WP_005600297.1;Parent=gene-D1109_RS09670;Dbxref=Genbank:WP_005600297.1;Name=WP_005600297.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005616700.1;locus_tag=D1109_RS09670;product=preprotein translocase subunit SecA;protein_id=WP_005600297.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1989325 1990512 . + . ID=gene-D1109_RS09675;Name=D1109_RS09675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09675;old_locus_tag=D1109_09690 NZ_CP031858.1 Protein Homology CDS 1989325 1990512 . + 0 ID=cds-WP_237611060.1;Parent=gene-D1109_RS09675;Dbxref=Genbank:WP_237611060.1;Name=WP_237611060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005614500.1;locus_tag=D1109_RS09675;product=glycosyltransferase;protein_id=WP_237611060.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1990509 1990907 . + . ID=gene-D1109_RS09680;Name=mutT;gbkey=Gene;gene=mutT;gene_biotype=protein_coding;locus_tag=D1109_RS09680;old_locus_tag=D1109_09695 NZ_CP031858.1 Protein Homology CDS 1990509 1990907 . + 0 ID=cds-WP_005596097.1;Parent=gene-D1109_RS09680;Dbxref=Genbank:WP_005596097.1;Name=WP_005596097.1;Ontology_term=GO:0006281,GO:0016818;gbkey=CDS;gene=mutT;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005611366.1;locus_tag=D1109_RS09680;product=8-oxo-dGTP diphosphatase MutT;protein_id=WP_005596097.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1991142 1992086 . + . ID=gene-D1109_RS09685;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=D1109_RS09685;old_locus_tag=D1109_09700 NZ_CP031858.1 Protein Homology CDS 1991142 1992086 . + 0 ID=cds-WP_005619064.1;Parent=gene-D1109_RS09685;Dbxref=Genbank:WP_005619064.1;Name=WP_005619064.1;Ontology_term=GO:0006592,GO:0003942;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991060.1;locus_tag=D1109_RS09685;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_005619064.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1992116 1992970 . + . ID=gene-D1109_RS09690;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=D1109_RS09690;old_locus_tag=D1109_09705 NZ_CP031858.1 Protein Homology CDS 1992116 1992970 . + 0 ID=cds-WP_005596099.1;Parent=gene-D1109_RS09690;Dbxref=Genbank:WP_005596099.1;Name=WP_005596099.1;Ontology_term=GO:0006592,GO:0003991;gbkey=CDS;gene=argB;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005611371.1;locus_tag=D1109_RS09690;product=acetylglutamate kinase;protein_id=WP_005596099.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1992984 1994165 . + . ID=gene-D1109_RS09695;Name=D1109_RS09695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09695;old_locus_tag=D1109_09710 NZ_CP031858.1 Protein Homology CDS 1992984 1994165 . + 0 ID=cds-WP_005606954.1;Parent=gene-D1109_RS09695;Dbxref=Genbank:WP_005606954.1;Name=WP_005606954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596100.1;locus_tag=D1109_RS09695;product=aspartate aminotransferase family protein;protein_id=WP_005606954.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1994379 1996088 . + . ID=gene-D1109_RS09700;Name=D1109_RS09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09700;old_locus_tag=D1109_09715 NZ_CP031858.1 Protein Homology CDS 1994379 1996088 . + 0 ID=cds-WP_237611061.1;Parent=gene-D1109_RS09700;Dbxref=Genbank:WP_237611061.1;Name=WP_237611061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600303.1;locus_tag=D1109_RS09700;product=transferrin-binding protein-like solute binding protein;protein_id=WP_237611061.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1996103 1998892 . + . ID=gene-D1109_RS09705;Name=D1109_RS09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09705;old_locus_tag=D1109_09720 NZ_CP031858.1 Protein Homology CDS 1996103 1998892 . + 0 ID=cds-WP_237611062.1;Parent=gene-D1109_RS09705;Dbxref=Genbank:WP_237611062.1;Name=WP_237611062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596103.1;locus_tag=D1109_RS09705;product=lactoferrin/transferrin family TonB-dependent receptor;protein_id=WP_237611062.1;transl_table=11 NZ_CP031858.1 RefSeq gene 1998940 2000202 . - . ID=gene-D1109_RS09710;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=D1109_RS09710;old_locus_tag=D1109_09725 NZ_CP031858.1 Protein Homology CDS 1998940 2000202 . - 0 ID=cds-WP_005596104.1;Parent=gene-D1109_RS09710;Dbxref=Genbank:WP_005596104.1;Name=WP_005596104.1;Ontology_term=GO:0006353,GO:0004386,GO:0008186;gbkey=CDS;gene=rho;go_function=helicase activity|0004386||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription%2C termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017492510.1;locus_tag=D1109_RS09710;product=transcription termination factor Rho;protein_id=WP_005596104.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2000400 2001350 . - . ID=gene-D1109_RS09715;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=D1109_RS09715;old_locus_tag=D1109_09730 NZ_CP031858.1 Protein Homology CDS 2000400 2001350 . - 0 ID=cds-WP_005600305.1;Parent=gene-D1109_RS09715;Dbxref=Genbank:WP_005600305.1;Name=WP_005600305.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005614516.1;locus_tag=D1109_RS09715;product=cysteine synthase A;protein_id=WP_005600305.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2001562 2002512 . - . ID=gene-D1109_RS09720;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=D1109_RS09720;old_locus_tag=D1109_09735 NZ_CP031858.1 Protein Homology CDS 2001562 2002512 . - 0 ID=cds-WP_005596106.1;Parent=gene-D1109_RS09720;Dbxref=Genbank:WP_005596106.1;Name=WP_005596106.1;Ontology_term=GO:0009088,GO:0004413;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005603495.1;locus_tag=D1109_RS09720;product=homoserine kinase;protein_id=WP_005596106.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2002512 2004968 . - . ID=gene-D1109_RS09725;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=D1109_RS09725;old_locus_tag=D1109_09740 NZ_CP031858.1 Protein Homology CDS 2002512 2004968 . - 0 ID=cds-WP_005596107.1;Parent=gene-D1109_RS09725;Dbxref=Genbank:WP_005596107.1;Name=WP_005596107.1;Ontology_term=GO:0008652,GO:0009067,GO:0004072,GO:0004412,GO:0050661;gbkey=CDS;gene=thrA;go_function=aspartate kinase activity|0004072||IEA,homoserine dehydrogenase activity|0004412||IEA,NADP binding|0050661||IEA;go_process=cellular amino acid biosynthetic process|0008652||IEA,aspartate family amino acid biosynthetic process|0009067||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005603497.1;locus_tag=D1109_RS09725;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=WP_005596107.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2005378 2006019 . + . ID=gene-D1109_RS09730;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=protein_coding;locus_tag=D1109_RS09730;old_locus_tag=D1109_09745 NZ_CP031858.1 Protein Homology CDS 2005378 2006019 . + 0 ID=cds-WP_237611063.1;Parent=gene-D1109_RS09730;Dbxref=Genbank:WP_237611063.1;Name=WP_237611063.1;Ontology_term=GO:0006801,GO:0004784;gbkey=CDS;gene=sodA;go_function=superoxide dismutase activity|0004784||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005708524.1;locus_tag=D1109_RS09730;product=superoxide dismutase [Mn];protein_id=WP_237611063.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2006107 2007231 . - . ID=gene-D1109_RS09735;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=D1109_RS09735;old_locus_tag=D1109_09750 NZ_CP031858.1 Protein Homology CDS 2006107 2007231 . - 0 ID=cds-WP_011848339.1;Parent=gene-D1109_RS09735;Dbxref=Genbank:WP_011848339.1;Name=WP_011848339.1;Ontology_term=GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011848339.1;locus_tag=D1109_RS09735;product=alanine racemase;protein_id=WP_011848339.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2007352 2009289 . + . ID=gene-D1109_RS09740;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=D1109_RS09740;old_locus_tag=D1109_09755 NZ_CP031858.1 Protein Homology CDS 2007352 2009289 . + 0 ID=cds-WP_009875339.1;Parent=gene-D1109_RS09740;Dbxref=Genbank:WP_009875339.1;Name=WP_009875339.1;Ontology_term=GO:0006281,GO:0006310,GO:0008854,GO:0009338;gbkey=CDS;gene=recD;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600309.1;locus_tag=D1109_RS09740;product=exodeoxyribonuclease V subunit alpha;protein_id=WP_009875339.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2009637 2011178 . + . ID=gene-D1109_RS09745;Name=D1109_RS09745;gbkey=Gene;gene_biotype=rRNA;locus_tag=D1109_RS09745;old_locus_tag=D1109_09760 NZ_CP031858.1 cmsearch rRNA 2009637 2011178 . + . ID=rna-D1109_RS09745;Parent=gene-D1109_RS09745;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D1109_RS09745;product=16S ribosomal RNA NZ_CP031858.1 cmsearch exon 2009637 2011178 . + . ID=exon-D1109_RS09745-1;Parent=rna-D1109_RS09745;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D1109_RS09745;product=16S ribosomal RNA NZ_CP031858.1 RefSeq gene 2011331 2011406 . + . ID=gene-D1109_RS09750;Name=D1109_RS09750;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS09750;old_locus_tag=D1109_09765 NZ_CP031858.1 tRNAscan-SE tRNA 2011331 2011406 . + . ID=rna-D1109_RS09750;Parent=gene-D1109_RS09750;anticodon=(pos:2011365..2011367);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS09750;product=tRNA-Glu NZ_CP031858.1 tRNAscan-SE exon 2011331 2011406 . + . ID=exon-D1109_RS09750-1;Parent=rna-D1109_RS09750;anticodon=(pos:2011365..2011367);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS09750;product=tRNA-Glu NZ_CP031858.1 RefSeq gene 2011625 2014525 . + . ID=gene-D1109_RS09755;Name=D1109_RS09755;gbkey=Gene;gene_biotype=rRNA;locus_tag=D1109_RS09755;old_locus_tag=D1109_09770 NZ_CP031858.1 cmsearch rRNA 2011625 2014525 . + . ID=rna-D1109_RS09755;Parent=gene-D1109_RS09755;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D1109_RS09755;product=23S ribosomal RNA NZ_CP031858.1 cmsearch exon 2011625 2014525 . + . ID=exon-D1109_RS09755-1;Parent=rna-D1109_RS09755;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D1109_RS09755;product=23S ribosomal RNA NZ_CP031858.1 RefSeq gene 2014685 2014800 . + . ID=gene-D1109_RS09760;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=D1109_RS09760;old_locus_tag=D1109_09775 NZ_CP031858.1 cmsearch rRNA 2014685 2014800 . + . ID=rna-D1109_RS09760;Parent=gene-D1109_RS09760;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D1109_RS09760;product=5S ribosomal RNA NZ_CP031858.1 cmsearch exon 2014685 2014800 . + . ID=exon-D1109_RS09760-1;Parent=rna-D1109_RS09760;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D1109_RS09760;product=5S ribosomal RNA NZ_CP031858.1 RefSeq gene 2015158 2016612 . - . ID=gene-D1109_RS09765;Name=D1109_RS09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09765;old_locus_tag=D1109_09780 NZ_CP031858.1 Protein Homology CDS 2015158 2016612 . - 0 ID=cds-WP_005618992.1;Parent=gene-D1109_RS09765;Dbxref=Genbank:WP_005618992.1;Name=WP_005618992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005606969.1;locus_tag=D1109_RS09765;product=aminoacyl-histidine dipeptidase;protein_id=WP_005618992.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2016785 2017258 . + . ID=gene-D1109_RS09770;Name=gpt;gbkey=Gene;gene=gpt;gene_biotype=protein_coding;locus_tag=D1109_RS09770;old_locus_tag=D1109_09785 NZ_CP031858.1 Protein Homology CDS 2016785 2017258 . + 0 ID=cds-WP_005600318.1;Parent=gene-D1109_RS09770;Dbxref=Genbank:WP_005600318.1;Name=WP_005600318.1;Ontology_term=GO:0009116,GO:0000310;gbkey=CDS;gene=gpt;go_function=xanthine phosphoribosyltransferase activity|0000310||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596130.1;locus_tag=D1109_RS09770;product=xanthine phosphoribosyltransferase;protein_id=WP_005600318.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2017342 2017962 . + . ID=gene-D1109_RS09775;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=D1109_RS09775;old_locus_tag=D1109_09790 NZ_CP031858.1 Protein Homology CDS 2017342 2017962 . + 0 ID=cds-WP_005596134.1;Parent=gene-D1109_RS09775;Dbxref=Genbank:WP_005596134.1;Name=WP_005596134.1;Ontology_term=GO:0015949,GO:0004385;gbkey=CDS;gene=gmk;go_function=guanylate kinase activity|0004385||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596134.1;locus_tag=D1109_RS09775;product=guanylate kinase;protein_id=WP_005596134.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2018064 2019458 . + . ID=gene-D1109_RS09780;Name=D1109_RS09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09780;old_locus_tag=D1109_09795 NZ_CP031858.1 Protein Homology CDS 2018064 2019458 . + 0 ID=cds-WP_005596137.1;Parent=gene-D1109_RS09780;Dbxref=Genbank:WP_005596137.1;Name=WP_005596137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596137.1;locus_tag=D1109_RS09780;product=TolC family protein;protein_id=WP_005596137.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2019506 2019802 . - . ID=gene-D1109_RS09785;Name=D1109_RS09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09785;old_locus_tag=D1109_09800 NZ_CP031858.1 Protein Homology CDS 2019506 2019802 . - 0 ID=cds-WP_005596139.1;Parent=gene-D1109_RS09785;Dbxref=Genbank:WP_005596139.1;Name=WP_005596139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991075.1;locus_tag=D1109_RS09785;product=RnfH family protein;protein_id=WP_005596139.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2019795 2020229 . - . ID=gene-D1109_RS09790;Name=D1109_RS09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09790;old_locus_tag=D1109_09805 NZ_CP031858.1 Protein Homology CDS 2019795 2020229 . - 0 ID=cds-WP_005596141.1;Parent=gene-D1109_RS09790;Dbxref=Genbank:WP_005596141.1;Name=WP_005596141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596141.1;locus_tag=D1109_RS09790;product=type II toxin-antitoxin system RatA family toxin;protein_id=WP_005596141.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2020277 2021332 . - . ID=gene-D1109_RS09795;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=D1109_RS09795;old_locus_tag=D1109_09810 NZ_CP031858.1 Protein Homology CDS 2020277 2021332 . - 0 ID=cds-WP_009875448.1;Parent=gene-D1109_RS09795;Dbxref=Genbank:WP_009875448.1;Name=WP_009875448.1;Ontology_term=GO:0015689,GO:0005524,GO:0015098,GO:0016020;gbkey=CDS;gene=modC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875448.1;locus_tag=D1109_RS09795;product=molybdenum ABC transporter ATP-binding protein ModC;protein_id=WP_009875448.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2021336 2022025 . - . ID=gene-D1109_RS09800;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=D1109_RS09800;old_locus_tag=D1109_09815 NZ_CP031858.1 Protein Homology CDS 2021336 2022025 . - 0 ID=cds-WP_005596144.1;Parent=gene-D1109_RS09800;Dbxref=Genbank:WP_005596144.1;Name=WP_005596144.1;Ontology_term=GO:0015689,GO:0015098,GO:0016021;gbkey=CDS;gene=modB;go_component=integral component of membrane|0016021||IEA;go_function=molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600322.1;locus_tag=D1109_RS09800;product=molybdate ABC transporter permease subunit;protein_id=WP_005596144.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2022085 2022843 . - . ID=gene-D1109_RS09805;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=D1109_RS09805;old_locus_tag=D1109_09820 NZ_CP031858.1 Protein Homology CDS 2022085 2022843 . - 0 ID=cds-WP_005606979.1;Parent=gene-D1109_RS09805;Dbxref=Genbank:WP_005606979.1;Name=WP_005606979.1;Ontology_term=GO:0015689;gbkey=CDS;gene=modA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596146.1;locus_tag=D1109_RS09805;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_005606979.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2022939 2023700 . - . ID=gene-D1109_RS09810;Name=D1109_RS09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09810;old_locus_tag=D1109_09825 NZ_CP031858.1 Protein Homology CDS 2022939 2023700 . - 0 ID=cds-WP_005603512.1;Parent=gene-D1109_RS09810;Dbxref=Genbank:WP_005603512.1;Name=WP_005603512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007523083.1;locus_tag=D1109_RS09810;product=ABC transporter permease;protein_id=WP_005603512.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2023704 2024612 . - . ID=gene-D1109_RS09815;Name=D1109_RS09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09815;old_locus_tag=D1109_09830 NZ_CP031858.1 Protein Homology CDS 2023704 2024612 . - 0 ID=cds-WP_005596150.1;Parent=gene-D1109_RS09815;Dbxref=Genbank:WP_005596150.1;Name=WP_005596150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596150.1;locus_tag=D1109_RS09815;product=ABC transporter ATP-binding protein;protein_id=WP_005596150.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2024612 2026678 . - . ID=gene-D1109_RS09820;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=D1109_RS09820;old_locus_tag=D1109_09835 NZ_CP031858.1 Protein Homology CDS 2024612 2026678 . - 0 ID=cds-WP_009875447.1;Parent=gene-D1109_RS09820;Dbxref=Genbank:WP_009875447.1;Name=WP_009875447.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596152.1;locus_tag=D1109_RS09820;product=DNA polymerase III subunit gamma/tau;protein_id=WP_009875447.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2026727 2027266 . - . ID=gene-D1109_RS09825;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=D1109_RS09825;old_locus_tag=D1109_09840 NZ_CP031858.1 Protein Homology CDS 2026727 2027266 . - 0 ID=cds-WP_005596155.1;Parent=gene-D1109_RS09825;Dbxref=Genbank:WP_005596155.1;Name=WP_005596155.1;Ontology_term=GO:0006168,GO:0003999;gbkey=CDS;gene=apt;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991082.1;locus_tag=D1109_RS09825;product=adenine phosphoribosyltransferase;protein_id=WP_005596155.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2027467 2028099 . + . ID=gene-D1109_RS09830;Name=D1109_RS09830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09830;old_locus_tag=D1109_09845 NZ_CP031858.1 Protein Homology CDS 2027467 2028099 . + 0 ID=cds-WP_005611380.1;Parent=gene-D1109_RS09830;Dbxref=Genbank:WP_005611380.1;Name=WP_005611380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005603518.1;locus_tag=D1109_RS09830;product=helix-turn-helix transcriptional regulator;protein_id=WP_005611380.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2028099 2028461 . + . ID=gene-D1109_RS09835;Name=D1109_RS09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09835;old_locus_tag=D1109_09850 NZ_CP031858.1 Protein Homology CDS 2028099 2028461 . + 0 ID=cds-WP_005600331.1;Parent=gene-D1109_RS09835;Dbxref=Genbank:WP_005600331.1;Name=WP_005600331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600331.1;locus_tag=D1109_RS09835;product=RidA family protein;protein_id=WP_005600331.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2028472 2029524 . + . ID=gene-D1109_RS09840;Name=D1109_RS09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09840;old_locus_tag=D1109_09855 NZ_CP031858.1 Protein Homology CDS 2028472 2029524 . + 0 ID=cds-WP_005611382.1;Parent=gene-D1109_RS09840;Dbxref=Genbank:WP_005611382.1;Name=WP_005611382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875445.1;locus_tag=D1109_RS09840;product=threonine synthase;protein_id=WP_005611382.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2029539 2030030 . + . ID=gene-D1109_RS09845;Name=D1109_RS09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09845;old_locus_tag=D1109_09860 NZ_CP031858.1 Protein Homology CDS 2029539 2030030 . + 0 ID=cds-WP_005596163.1;Parent=gene-D1109_RS09845;Dbxref=Genbank:WP_005596163.1;Name=WP_005596163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596163.1;locus_tag=D1109_RS09845;product=YbaK/prolyl-tRNA synthetase associated domain-containing protein;protein_id=WP_005596163.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2030141 2030896 . - . ID=gene-D1109_RS09850;Name=D1109_RS09850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09850;old_locus_tag=D1109_09865 NZ_CP031858.1 Protein Homology CDS 2030141 2030896 . - 0 ID=cds-WP_237611064.1;Parent=gene-D1109_RS09850;Dbxref=Genbank:WP_237611064.1;Name=WP_237611064.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596165.1;locus_tag=D1109_RS09850;product=ATP-binding cassette domain-containing protein;protein_id=WP_237611064.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2030898 2031731 . - . ID=gene-D1109_RS09855;Name=D1109_RS09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09855;old_locus_tag=D1109_09870 NZ_CP031858.1 Protein Homology CDS 2030898 2031731 . - 0 ID=cds-WP_231944218.1;Parent=gene-D1109_RS09855;Dbxref=Genbank:WP_231944218.1;Name=WP_231944218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010945595.1;locus_tag=D1109_RS09855;product=metal ABC transporter substrate-binding protein;protein_id=WP_231944218.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2031861 2032196 . - . ID=gene-D1109_RS09860;Name=D1109_RS09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09860;old_locus_tag=D1109_09875 NZ_CP031858.1 Protein Homology CDS 2031861 2032196 . - 0 ID=cds-WP_005614530.1;Parent=gene-D1109_RS09860;Dbxref=Genbank:WP_005614530.1;Name=WP_005614530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005614530.1;locus_tag=D1109_RS09860;product=TusE/DsrC/DsvC family sulfur relay protein;protein_id=WP_005614530.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2032248 2032913 . - . ID=gene-D1109_RS09865;Name=D1109_RS09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09865;old_locus_tag=D1109_09880 NZ_CP031858.1 Protein Homology CDS 2032248 2032913 . - 0 ID=cds-WP_005606991.1;Parent=gene-D1109_RS09865;Dbxref=Genbank:WP_005606991.1;Name=WP_005606991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011848341.1;locus_tag=D1109_RS09865;product=Bax inhibitor-1 family protein;protein_id=WP_005606991.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2033095 2033646 . + . ID=gene-D1109_RS09870;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=D1109_RS09870;old_locus_tag=D1109_09885 NZ_CP031858.1 Protein Homology CDS 2033095 2033646 . + 0 ID=cds-WP_005619923.1;Parent=gene-D1109_RS09870;Dbxref=Genbank:WP_005619923.1;Name=WP_005619923.1;Ontology_term=GO:0008654,GO:0008444;gbkey=CDS;gene=pgsA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253707.1;locus_tag=D1109_RS09870;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_005619923.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2033766 2035736 . + . ID=gene-D1109_RS09875;Name=D1109_RS09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09875;old_locus_tag=D1109_09890 NZ_CP031858.1 Protein Homology CDS 2033766 2035736 . + 0 ID=cds-WP_005596175.1;Parent=gene-D1109_RS09875;Dbxref=Genbank:WP_005596175.1;Name=WP_005596175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596175.1;locus_tag=D1109_RS09875;product=TonB-dependent receptor;protein_id=WP_005596175.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2035889 2037721 . + . ID=gene-D1109_RS09880;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=D1109_RS09880;old_locus_tag=D1109_09895 NZ_CP031858.1 Protein Homology CDS 2035889 2037721 . + 0 ID=cds-WP_237611065.1;Parent=gene-D1109_RS09880;Dbxref=Genbank:WP_237611065.1;Name=WP_237611065.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005611386.1;locus_tag=D1109_RS09880;product=excinuclease ABC subunit UvrC;protein_id=WP_237611065.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2037790 2038542 . + . ID=gene-D1109_RS09885;Name=D1109_RS09885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09885;old_locus_tag=D1109_09900 NZ_CP031858.1 Protein Homology CDS 2037790 2038542 . + 0 ID=cds-WP_237611066.1;Parent=gene-D1109_RS09885;Dbxref=Genbank:WP_237611066.1;Name=WP_237611066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005616725.1;locus_tag=D1109_RS09885;product=TatD family hydrolase;protein_id=WP_237611066.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2038679 2040697 . - . ID=gene-D1109_RS09890;Name=rep;gbkey=Gene;gene=rep;gene_biotype=protein_coding;locus_tag=D1109_RS09890;old_locus_tag=D1109_09905 NZ_CP031858.1 Protein Homology CDS 2038679 2040697 . - 0 ID=cds-WP_005596184.1;Parent=gene-D1109_RS09890;Dbxref=Genbank:WP_005596184.1;Name=WP_005596184.1;Ontology_term=GO:0006310,GO:0003678;gbkey=CDS;gene=rep;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600347.1;locus_tag=D1109_RS09890;product=DNA helicase Rep;protein_id=WP_005596184.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2041031 2042146 . + . ID=gene-D1109_RS09895;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=D1109_RS09895;old_locus_tag=D1109_09910 NZ_CP031858.1 Protein Homology CDS 2041031 2042146 . + 0 ID=cds-WP_005600350.1;Parent=gene-D1109_RS09895;Dbxref=Genbank:WP_005600350.1;Name=WP_005600350.1;Ontology_term=GO:0015846,GO:0005524,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=potA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596185.1;locus_tag=D1109_RS09895;product=spermidine/putrescine ABC transporter ATP-binding protein PotA;protein_id=WP_005600350.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2042133 2042999 . + . ID=gene-D1109_RS09900;Name=potB;gbkey=Gene;gene=potB;gene_biotype=protein_coding;locus_tag=D1109_RS09900;old_locus_tag=D1109_09915 NZ_CP031858.1 Protein Homology CDS 2042133 2042999 . + 0 ID=cds-WP_005603539.1;Parent=gene-D1109_RS09900;Dbxref=Genbank:WP_005603539.1;Name=WP_005603539.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005698572.1;locus_tag=D1109_RS09900;product=spermidine/putrescine ABC transporter permease PotB;protein_id=WP_005603539.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2042999 2043766 . + . ID=gene-D1109_RS09905;Name=potC;gbkey=Gene;gene=potC;gene_biotype=protein_coding;locus_tag=D1109_RS09905;old_locus_tag=D1109_09920 NZ_CP031858.1 Protein Homology CDS 2042999 2043766 . + 0 ID=cds-WP_039708954.1;Parent=gene-D1109_RS09905;Dbxref=Genbank:WP_039708954.1;Name=WP_039708954.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005822687.1;locus_tag=D1109_RS09905;product=spermidine/putrescine ABC transporter permease PotC;protein_id=WP_039708954.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2043903 2044508 . + . ID=gene-D1109_RS09910;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=D1109_RS09910;old_locus_tag=D1109_09925 NZ_CP031858.1 Protein Homology CDS 2043903 2044508 . + 0 ID=cds-WP_005600357.1;Parent=gene-D1109_RS09910;Dbxref=Genbank:WP_005600357.1;Name=WP_005600357.1;Ontology_term=GO:0006310,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=four-way junction helicase activity|0009378||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005686751.1;locus_tag=D1109_RS09910;product=Holliday junction branch migration protein RuvA;protein_id=WP_005600357.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2044527 2045531 . + . ID=gene-D1109_RS09915;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=D1109_RS09915;old_locus_tag=D1109_09930 NZ_CP031858.1 Protein Homology CDS 2044527 2045531 . + 0 ID=cds-WP_005600359.1;Parent=gene-D1109_RS09915;Dbxref=Genbank:WP_005600359.1;Name=WP_005600359.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652076.1;locus_tag=D1109_RS09915;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_005600359.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2045588 2046292 . - . ID=gene-D1109_RS09920;Name=ubiG;gbkey=Gene;gene=ubiG;gene_biotype=protein_coding;locus_tag=D1109_RS09920;old_locus_tag=D1109_09935 NZ_CP031858.1 Protein Homology CDS 2045588 2046292 . - 0 ID=cds-WP_237611067.1;Parent=gene-D1109_RS09920;Dbxref=Genbank:WP_237611067.1;Name=WP_237611067.1;Ontology_term=GO:0006744,GO:0008689;gbkey=CDS;gene=ubiG;go_function=3-demethylubiquinone-9 3-O-methyltransferase activity|0008689||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005607008.1;locus_tag=D1109_RS09920;product=bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG;protein_id=WP_237611067.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2046472 2049162 . + . ID=gene-D1109_RS09925;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=D1109_RS09925;old_locus_tag=D1109_09940 NZ_CP031858.1 Protein Homology CDS 2046472 2049162 . + 0 ID=cds-WP_009874680.1;Parent=gene-D1109_RS09925;Dbxref=Genbank:WP_009874680.1;Name=WP_009874680.1;Ontology_term=GO:0006265,GO:0003916,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrA;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005611398.1;locus_tag=D1109_RS09925;product=DNA topoisomerase (ATP-hydrolyzing) subunit A;protein_id=WP_009874680.1;transl_table=11 NZ_CP031858.1 RefSeq pseudogene 2049259 2050806 . + . ID=gene-D1109_RS09930;Name=D1109_RS09930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D1109_RS09930;old_locus_tag=D1109_09945;pseudo=true NZ_CP031858.1 Protein Homology CDS 2049259 2050806 . + 0 ID=cds-D1109_RS09930;Parent=gene-D1109_RS09930;Note=internal stop;Ontology_term=GO:0006306,GO:0009307,GO:0009007,GO:0015666;gbkey=CDS;go_function=site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA,restriction endodeoxyribonuclease activity|0015666||IEA;go_process=DNA methylation|0006306||IEA,DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596198.1;locus_tag=D1109_RS09930;product=type I restriction-modification system subunit M;pseudo=true;transl_table=11 NZ_CP031858.1 RefSeq pseudogene 2050808 2051125 . + . ID=gene-D1109_RS09935;Name=D1109_RS09935;end_range=2051125,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D1109_RS09935;old_locus_tag=D1109_09950;partial=true;pseudo=true NZ_CP031858.1 Protein Homology CDS 2050808 2051125 . + 0 ID=cds-D1109_RS09935;Parent=gene-D1109_RS09935;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2051125,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250903.1;locus_tag=D1109_RS09935;partial=true;product=Bro-N domain-containing protein;pseudo=true;transl_table=11 NZ_CP031858.1 RefSeq gene 2051295 2052389 . + . ID=gene-D1109_RS09940;Name=D1109_RS09940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09940;old_locus_tag=D1109_09955 NZ_CP031858.1 Protein Homology CDS 2051295 2052389 . + 0 ID=cds-WP_237611068.1;Parent=gene-D1109_RS09940;Dbxref=Genbank:WP_237611068.1;Name=WP_237611068.1;Ontology_term=GO:0006304;gbkey=CDS;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874676.1;locus_tag=D1109_RS09940;product=restriction endonuclease subunit S;protein_id=WP_237611068.1;transl_table=11 NZ_CP031858.1 RefSeq pseudogene 2052395 2053510 . + . ID=gene-D1109_RS09945;Name=D1109_RS09945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D1109_RS09945;old_locus_tag=D1109_09960;pseudo=true NZ_CP031858.1 Protein Homology CDS 2052395 2053510 . + 0 ID=cds-D1109_RS09945;Parent=gene-D1109_RS09945;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012262764.1;locus_tag=D1109_RS09945;product=anticodon nuclease;pseudo=true;transl_table=11 NZ_CP031858.1 RefSeq gene 2053516 2056650 . + . ID=gene-D1109_RS09950;Name=D1109_RS09950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09950;old_locus_tag=D1109_09965 NZ_CP031858.1 Protein Homology CDS 2053516 2056650 . + 0 ID=cds-WP_237611069.1;Parent=gene-D1109_RS09950;Dbxref=Genbank:WP_237611069.1;Name=WP_237611069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005607020.1;locus_tag=D1109_RS09950;product=type I restriction endonuclease subunit R;protein_id=WP_237611069.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2056669 2058612 . + . ID=gene-D1109_RS09955;Name=D1109_RS09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09955;old_locus_tag=D1109_09970 NZ_CP031858.1 Protein Homology CDS 2056669 2058612 . + 0 ID=cds-WP_215577663.1;Parent=gene-D1109_RS09955;Dbxref=Genbank:WP_215577663.1;Name=WP_215577663.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600393.1;locus_tag=D1109_RS09955;product=ABC transporter ATP-binding protein;protein_id=WP_215577663.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2058612 2059376 . + . ID=gene-D1109_RS09960;Name=tcdA;gbkey=Gene;gene=tcdA;gene_biotype=protein_coding;locus_tag=D1109_RS09960;old_locus_tag=D1109_09975 NZ_CP031858.1 Protein Homology CDS 2058612 2059376 . + 0 ID=cds-WP_215577664.1;Parent=gene-D1109_RS09960;Dbxref=Genbank:WP_215577664.1;Name=WP_215577664.1;Ontology_term=GO:0008641;gbkey=CDS;gene=tcdA;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874672.1;locus_tag=D1109_RS09960;product=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;protein_id=WP_215577664.1;transl_table=11 NZ_CP031858.1 RefSeq pseudogene 2059453 2060794 . - . ID=gene-D1109_RS09965;Name=D1109_RS09965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D1109_RS09965;old_locus_tag=D1109_09980;pseudo=true NZ_CP031858.1 Protein Homology CDS 2059453 2060794 . - 0 ID=cds-D1109_RS09965;Parent=gene-D1109_RS09965;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612109.1;locus_tag=D1109_RS09965;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP031858.1 RefSeq gene 2060882 2061214 . - . ID=gene-D1109_RS09970;Name=D1109_RS09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09970;old_locus_tag=D1109_09985 NZ_CP031858.1 Protein Homology CDS 2060882 2061214 . - 0 ID=cds-WP_005596205.1;Parent=gene-D1109_RS09970;Dbxref=Genbank:WP_005596205.1;Name=WP_005596205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596205.1;locus_tag=D1109_RS09970;product=DUF5339 domain-containing protein;protein_id=WP_005596205.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2061670 2063220 . + . ID=gene-D1109_RS09975;Name=D1109_RS09975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09975;old_locus_tag=D1109_09990 NZ_CP031858.1 Protein Homology CDS 2061670 2063220 . + 0 ID=cds-WP_005596207.1;Parent=gene-D1109_RS09975;Dbxref=Genbank:WP_005596207.1;Name=WP_005596207.1;Ontology_term=GO:0070069;gbkey=CDS;go_component=cytochrome complex|0070069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010945563.1;locus_tag=D1109_RS09975;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_005596207.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2063234 2064370 . + . ID=gene-D1109_RS09980;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=D1109_RS09980;old_locus_tag=D1109_09995 NZ_CP031858.1 Protein Homology CDS 2063234 2064370 . + 0 ID=cds-WP_005603563.1;Parent=gene-D1109_RS09980;Dbxref=Genbank:WP_005603563.1;Name=WP_005603563.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010945562.1;locus_tag=D1109_RS09980;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_005603563.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2064383 2064481 . + . ID=gene-D1109_RS09985;Name=D1109_RS09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS09985;old_locus_tag=D1109_10000 NZ_CP031858.1 Protein Homology CDS 2064383 2064481 . + 0 ID=cds-WP_005619000.1;Parent=gene-D1109_RS09985;Dbxref=Genbank:WP_005619000.1;Name=WP_005619000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249838.1;locus_tag=D1109_RS09985;product=cytochrome bd oxidase small subunit%2C CydX/CbdX family;protein_id=WP_005619000.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2064493 2064795 . + . ID=gene-D1109_RS09990;Name=ybgE;gbkey=Gene;gene=ybgE;gene_biotype=protein_coding;locus_tag=D1109_RS09990;old_locus_tag=D1109_10005 NZ_CP031858.1 Protein Homology CDS 2064493 2064795 . + 0 ID=cds-WP_012262767.1;Parent=gene-D1109_RS09990;Dbxref=Genbank:WP_012262767.1;Name=WP_012262767.1;gbkey=CDS;gene=ybgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012262767.1;locus_tag=D1109_RS09990;product=cyd operon protein YbgE;protein_id=WP_012262767.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2064938 2065327 . + . ID=gene-D1109_RS09995;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;locus_tag=D1109_RS09995;old_locus_tag=D1109_10010 NZ_CP031858.1 Protein Homology CDS 2064938 2065327 . + 0 ID=cds-WP_005619001.1;Parent=gene-D1109_RS09995;Dbxref=Genbank:WP_005619001.1;Name=WP_005619001.1;Ontology_term=GO:0005515,GO:0047617;gbkey=CDS;gene=ybgC;go_function=protein binding|0005515||IEA,acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991828.1;locus_tag=D1109_RS09995;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_005619001.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2065362 2066042 . + . ID=gene-D1109_RS10000;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=D1109_RS10000;old_locus_tag=D1109_10015 NZ_CP031858.1 Protein Homology CDS 2065362 2066042 . + 0 ID=cds-WP_005600402.1;Parent=gene-D1109_RS10000;Dbxref=Genbank:WP_005600402.1;Name=WP_005600402.1;Ontology_term=GO:1902600,GO:0015078,GO:0005887;gbkey=CDS;gene=tolQ;go_component=integral component of plasma membrane|0005887||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596212.1;locus_tag=D1109_RS10000;product=protein TolQ;protein_id=WP_005600402.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2066119 2066559 . + . ID=gene-D1109_RS10005;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=D1109_RS10005;old_locus_tag=D1109_10020 NZ_CP031858.1 Protein Homology CDS 2066119 2066559 . + 0 ID=cds-WP_005600403.1;Parent=gene-D1109_RS10005;Dbxref=Genbank:WP_005600403.1;Name=WP_005600403.1;gbkey=CDS;gene=tolR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596213.1;locus_tag=D1109_RS10005;product=colicin uptake protein TolR;protein_id=WP_005600403.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2066575 2067870 . + . ID=gene-D1109_RS10010;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=D1109_RS10010;old_locus_tag=D1109_10025 NZ_CP031858.1 Protein Homology CDS 2066575 2067870 . + 0 ID=cds-WP_237611070.1;Parent=gene-D1109_RS10010;Dbxref=Genbank:WP_237611070.1;Name=WP_237611070.1;Ontology_term=GO:0006810,GO:0005215,GO:0031237;gbkey=CDS;gene=tolA;go_component=intrinsic component of periplasmic side of plasma membrane|0031237||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012478322.1;locus_tag=D1109_RS10010;product=cell envelope integrity protein TolA;protein_id=WP_237611070.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2067888 2069168 . + . ID=gene-D1109_RS10015;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=D1109_RS10015;old_locus_tag=D1109_10030 NZ_CP031858.1 Protein Homology CDS 2067888 2069168 . + 0 ID=cds-WP_005596216.1;Parent=gene-D1109_RS10015;Dbxref=Genbank:WP_005596216.1;Name=WP_005596216.1;Ontology_term=GO:0006810,GO:0005215,GO:0030288;gbkey=CDS;gene=tolB;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991826.1;locus_tag=D1109_RS10015;product=Tol-Pal system beta propeller repeat protein TolB;protein_id=WP_005596216.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2069195 2069653 . + . ID=gene-D1109_RS10020;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=D1109_RS10020;old_locus_tag=D1109_10035 NZ_CP031858.1 Protein Homology CDS 2069195 2069653 . + 0 ID=cds-WP_005596217.1;Parent=gene-D1109_RS10020;Dbxref=Genbank:WP_005596217.1;Name=WP_005596217.1;Ontology_term=GO:0009279;gbkey=CDS;gene=pal;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596217.1;locus_tag=D1109_RS10020;product=peptidoglycan-associated lipoprotein Pal;protein_id=WP_005596217.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2069750 2070637 . + . ID=gene-D1109_RS10025;Name=D1109_RS10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10025;old_locus_tag=D1109_10040 NZ_CP031858.1 Protein Homology CDS 2069750 2070637 . + 0 ID=cds-WP_237611071.1;Parent=gene-D1109_RS10025;Dbxref=Genbank:WP_237611071.1;Name=WP_237611071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005609755.1;locus_tag=D1109_RS10025;product=DMT family transporter;protein_id=WP_237611071.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2070717 2071577 . + . ID=gene-D1109_RS10030;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=D1109_RS10030;old_locus_tag=D1109_10045 NZ_CP031858.1 Protein Homology CDS 2070717 2071577 . + 0 ID=cds-WP_237611072.1;Parent=gene-D1109_RS10030;Dbxref=Genbank:WP_237611072.1;Name=WP_237611072.1;Ontology_term=GO:0051087;gbkey=CDS;gene=djlA;go_function=chaperone binding|0051087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005609757.1;locus_tag=D1109_RS10030;product=co-chaperone DjlA;protein_id=WP_237611072.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2071662 2072624 . + . ID=gene-D1109_RS10035;Name=dusC;gbkey=Gene;gene=dusC;gene_biotype=protein_coding;locus_tag=D1109_RS10035;old_locus_tag=D1109_10050 NZ_CP031858.1 Protein Homology CDS 2071662 2072624 . + 0 ID=cds-WP_237611073.1;Parent=gene-D1109_RS10035;Dbxref=Genbank:WP_237611073.1;Name=WP_237611073.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusC;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005619002.1;locus_tag=D1109_RS10035;product=tRNA dihydrouridine(16) synthase DusC;protein_id=WP_237611073.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2072676 2073722 . + . ID=gene-D1109_RS10040;Name=D1109_RS10040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10040;old_locus_tag=D1109_10055 NZ_CP031858.1 Protein Homology CDS 2072676 2073722 . + 0 ID=cds-WP_043995267.1;Parent=gene-D1109_RS10040;Dbxref=Genbank:WP_043995267.1;Name=WP_043995267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652043.1;locus_tag=D1109_RS10040;product=YcjF family protein;protein_id=WP_043995267.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2073919 2075835 . - . ID=gene-D1109_RS10045;Name=D1109_RS10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10045;old_locus_tag=D1109_10060 NZ_CP031858.1 Protein Homology CDS 2073919 2075835 . - 0 ID=cds-WP_237611074.1;Parent=gene-D1109_RS10045;Dbxref=Genbank:WP_237611074.1;Name=WP_237611074.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005616773.1;locus_tag=D1109_RS10045;product=ABC transporter ATP-binding protein;protein_id=WP_237611074.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2075996 2076238 . + . ID=gene-D1109_RS10050;Name=D1109_RS10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10050;old_locus_tag=D1109_10065 NZ_CP031858.1 Protein Homology CDS 2075996 2076238 . + 0 ID=cds-WP_017357736.1;Parent=gene-D1109_RS10050;Dbxref=Genbank:WP_017357736.1;Name=WP_017357736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017357736.1;locus_tag=D1109_RS10050;product=hypothetical protein;protein_id=WP_017357736.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2076426 2077667 . + . ID=gene-D1109_RS10055;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;locus_tag=D1109_RS10055;old_locus_tag=D1109_10070 NZ_CP031858.1 Protein Homology CDS 2076426 2077667 . + 0 ID=cds-WP_005600413.1;Parent=gene-D1109_RS10055;Dbxref=Genbank:WP_005600413.1;Name=WP_005600413.1;Ontology_term=GO:0006777,GO:0032324;gbkey=CDS;gene=moeA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA,molybdopterin cofactor biosynthetic process|0032324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596228.1;locus_tag=D1109_RS10055;product=molybdopterin molybdotransferase MoeA;protein_id=WP_005600413.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2077677 2078477 . + . ID=gene-D1109_RS10060;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=D1109_RS10060;old_locus_tag=D1109_10075 NZ_CP031858.1 Protein Homology CDS 2077677 2078477 . + 0 ID=cds-WP_237611075.1;Parent=gene-D1109_RS10060;Dbxref=Genbank:WP_237611075.1;Name=WP_237611075.1;Ontology_term=GO:0006777,GO:0008641;gbkey=CDS;gene=moeB;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005614570.1;locus_tag=D1109_RS10060;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=WP_237611075.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2078516 2078591 . + . ID=gene-D1109_RS10065;Name=D1109_RS10065;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS10065;old_locus_tag=D1109_10080 NZ_CP031858.1 tRNAscan-SE tRNA 2078516 2078591 . + . ID=rna-D1109_RS10065;Parent=gene-D1109_RS10065;anticodon=(pos:2078549..2078551);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS10065;product=tRNA-Asn NZ_CP031858.1 tRNAscan-SE exon 2078516 2078591 . + . ID=exon-D1109_RS10065-1;Parent=rna-D1109_RS10065;anticodon=(pos:2078549..2078551);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS10065;product=tRNA-Asn NZ_CP031858.1 RefSeq gene 2078820 2080148 . - . ID=gene-D1109_RS10070;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=D1109_RS10070;old_locus_tag=D1109_10085 NZ_CP031858.1 Protein Homology CDS 2078820 2080148 . - 0 ID=cds-WP_237611076.1;Parent=gene-D1109_RS10070;Dbxref=Genbank:WP_237611076.1;Name=WP_237611076.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmD;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600415.1;locus_tag=D1109_RS10070;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_237611076.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2080206 2081531 . + . ID=gene-D1109_RS10075;Name=D1109_RS10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10075;old_locus_tag=D1109_10090 NZ_CP031858.1 Protein Homology CDS 2080206 2081531 . + 0 ID=cds-WP_237611077.1;Parent=gene-D1109_RS10075;Dbxref=Genbank:WP_237611077.1;Name=WP_237611077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596233.1;locus_tag=D1109_RS10075;product=deoxyguanosinetriphosphate triphosphohydrolase family protein;protein_id=WP_237611077.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2081703 2084612 . + . ID=gene-D1109_RS10080;Name=rapA;gbkey=Gene;gene=rapA;gene_biotype=protein_coding;locus_tag=D1109_RS10080;old_locus_tag=D1109_10095 NZ_CP031858.1 Protein Homology CDS 2081703 2084612 . + 0 ID=cds-WP_005616776.1;Parent=gene-D1109_RS10080;Dbxref=Genbank:WP_005616776.1;Name=WP_005616776.1;Ontology_term=GO:0006355,GO:0005524,GO:0016817,GO:0140658;gbkey=CDS;gene=rapA;go_function=ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides|0016817||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005607060.1;locus_tag=D1109_RS10080;product=RNA polymerase-associated protein RapA;protein_id=WP_005616776.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2084728 2085396 . + . ID=gene-D1109_RS10085;Name=rluA;gbkey=Gene;gene=rluA;gene_biotype=protein_coding;locus_tag=D1109_RS10085;old_locus_tag=D1109_10100 NZ_CP031858.1 Protein Homology CDS 2084728 2085396 . + 0 ID=cds-WP_005619004.1;Parent=gene-D1109_RS10085;Dbxref=Genbank:WP_005619004.1;Name=WP_005619004.1;Ontology_term=GO:0001522,GO:0009451,GO:0009982;gbkey=CDS;gene=rluA;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005619004.1;locus_tag=D1109_RS10085;product=bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA;protein_id=WP_005619004.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2085592 2086140 . - . ID=gene-D1109_RS10090;Name=ampD;gbkey=Gene;gene=ampD;gene_biotype=protein_coding;locus_tag=D1109_RS10090;old_locus_tag=D1109_10105 NZ_CP031858.1 Protein Homology CDS 2085592 2086140 . - 0 ID=cds-WP_005596240.1;Parent=gene-D1109_RS10090;Dbxref=Genbank:WP_005596240.1;Name=WP_005596240.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=ampD;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596240.1;locus_tag=D1109_RS10090;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;protein_id=WP_005596240.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2086261 2087103 . + . ID=gene-D1109_RS10095;Name=D1109_RS10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10095;old_locus_tag=D1109_10110 NZ_CP031858.1 Protein Homology CDS 2086261 2087103 . + 0 ID=cds-WP_005596243.1;Parent=gene-D1109_RS10095;Dbxref=Genbank:WP_005596243.1;Name=WP_005596243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001300574.1;locus_tag=D1109_RS10095;product=23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ;protein_id=WP_005596243.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2087190 2087831 . + . ID=gene-D1109_RS10100;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=D1109_RS10100;old_locus_tag=D1109_10115 NZ_CP031858.1 Protein Homology CDS 2087190 2087831 . + 0 ID=cds-WP_237611078.1;Parent=gene-D1109_RS10100;Dbxref=Genbank:WP_237611078.1;Name=WP_237611078.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596245.1;locus_tag=D1109_RS10100;product=orotate phosphoribosyltransferase;protein_id=WP_237611078.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2087970 2089058 . + . ID=gene-D1109_RS10105;Name=D1109_RS10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10105;old_locus_tag=D1109_10120 NZ_CP031858.1 Protein Homology CDS 2087970 2089058 . + 0 ID=cds-WP_005596247.1;Parent=gene-D1109_RS10105;Dbxref=Genbank:WP_005596247.1;Name=WP_005596247.1;Ontology_term=GO:0009086,GO:0003871;gbkey=CDS;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005607068.1;locus_tag=D1109_RS10105;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_005596247.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2089187 2090227 . - . ID=gene-D1109_RS10110;Name=D1109_RS10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10110;old_locus_tag=D1109_10125 NZ_CP031858.1 Protein Homology CDS 2089187 2090227 . - 0 ID=cds-WP_005603118.1-4;Parent=gene-D1109_RS10110;Dbxref=Genbank:WP_005603118.1;Name=WP_005603118.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015587011.1;locus_tag=D1109_RS10110;product=IS481 family transposase;protein_id=WP_005603118.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2090347 2090646 . + . ID=gene-D1109_RS10115;Name=D1109_RS10115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10115;old_locus_tag=D1109_10130 NZ_CP031858.1 Protein Homology CDS 2090347 2090646 . + 0 ID=cds-WP_005597646.1;Parent=gene-D1109_RS10115;Dbxref=Genbank:WP_005597646.1;Name=WP_005597646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874852.1;locus_tag=D1109_RS10115;product=hypothetical protein;protein_id=WP_005597646.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2091058 2092179 . + . ID=gene-D1109_RS10120;Name=D1109_RS10120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10120;old_locus_tag=D1109_10135 NZ_CP031858.1 Protein Homology CDS 2091058 2092179 . + 0 ID=cds-WP_005597644.1;Parent=gene-D1109_RS10120;Dbxref=Genbank:WP_005597644.1;Name=WP_005597644.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005608124.1;locus_tag=D1109_RS10120;product=IS1595 family transposase;protein_id=WP_005597644.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2092498 2092767 . + . ID=gene-D1109_RS10125;Name=D1109_RS10125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10125;old_locus_tag=D1109_10140 NZ_CP031858.1 Protein Homology CDS 2092498 2092767 . + 0 ID=cds-WP_005597642.1;Parent=gene-D1109_RS10125;Dbxref=Genbank:WP_005597642.1;Name=WP_005597642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005601284.1;locus_tag=D1109_RS10125;product=N-acetyltransferase;protein_id=WP_005597642.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2092804 2094246 . - . ID=gene-D1109_RS10130;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=D1109_RS10130;old_locus_tag=D1109_10145 NZ_CP031858.1 Protein Homology CDS 2092804 2094246 . - 0 ID=cds-WP_237611079.1;Parent=gene-D1109_RS10130;Dbxref=Genbank:WP_237611079.1;Name=WP_237611079.1;Ontology_term=GO:0006508,GO:0004185;gbkey=CDS;gene=dacB;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005615286.1;locus_tag=D1109_RS10130;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_237611079.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2094330 2094806 . + . ID=gene-D1109_RS10135;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=D1109_RS10135;old_locus_tag=D1109_10150 NZ_CP031858.1 Protein Homology CDS 2094330 2094806 . + 0 ID=cds-WP_005608118.1;Parent=gene-D1109_RS10135;Dbxref=Genbank:WP_005608118.1;Name=WP_005608118.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription%2C elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651790.1;locus_tag=D1109_RS10135;product=transcription elongation factor GreA;protein_id=WP_005608118.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2094888 2095832 . - . ID=gene-D1109_RS10140;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=D1109_RS10140;old_locus_tag=D1109_10155 NZ_CP031858.1 Protein Homology CDS 2094888 2095832 . - 0 ID=cds-WP_005604610.1;Parent=gene-D1109_RS10140;Dbxref=Genbank:WP_005604610.1;Name=WP_005604610.1;Ontology_term=GO:0018364,GO:0042273,GO:0008276,GO:0008757;gbkey=CDS;gene=prmB;go_function=protein methyltransferase activity|0008276||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=peptidyl-glutamine methylation|0018364||IEA,ribosomal large subunit biogenesis|0042273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597635.1;locus_tag=D1109_RS10140;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=WP_005604610.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2095923 2097221 . + . ID=gene-D1109_RS10145;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=D1109_RS10145;old_locus_tag=D1109_10160 NZ_CP031858.1 Protein Homology CDS 2095923 2097221 . + 0 ID=cds-WP_009874853.1;Parent=gene-D1109_RS10145;Dbxref=Genbank:WP_009874853.1;Name=WP_009874853.1;Ontology_term=GO:0009102,GO:0004015,GO:0030170;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651788.1;locus_tag=D1109_RS10145;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_009874853.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2097248 2098411 . + . ID=gene-D1109_RS10150;Name=D1109_RS10150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10150;old_locus_tag=D1109_10165 NZ_CP031858.1 Protein Homology CDS 2097248 2098411 . + 0 ID=cds-WP_005601277.1;Parent=gene-D1109_RS10150;Dbxref=Genbank:WP_005601277.1;Name=WP_005601277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005710988.1;locus_tag=D1109_RS10150;product=8-amino-7-oxononanoate synthase;protein_id=WP_005601277.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2098421 2099080 . + . ID=gene-D1109_RS10155;Name=D1109_RS10155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10155;old_locus_tag=D1109_10170 NZ_CP031858.1 Protein Homology CDS 2098421 2099080 . + 0 ID=cds-WP_005601275.1;Parent=gene-D1109_RS10155;Dbxref=Genbank:WP_005601275.1;Name=WP_005601275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597628.1;locus_tag=D1109_RS10155;product=DUF452 family protein;protein_id=WP_005601275.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2099068 2099838 . + . ID=gene-D1109_RS10160;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=D1109_RS10160;old_locus_tag=D1109_10175 NZ_CP031858.1 Protein Homology CDS 2099068 2099838 . + 0 ID=cds-WP_005601273.1;Parent=gene-D1109_RS10160;Dbxref=Genbank:WP_005601273.1;Name=WP_005601273.1;Ontology_term=GO:0009102,GO:0008171;gbkey=CDS;gene=bioC;go_function=O-methyltransferase activity|0008171||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005601273.1;locus_tag=D1109_RS10160;product=malonyl-ACP O-methyltransferase BioC;protein_id=WP_005601273.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2099838 2100482 . + . ID=gene-D1109_RS10165;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=D1109_RS10165;old_locus_tag=D1109_10180 NZ_CP031858.1 Protein Homology CDS 2099838 2100482 . + 0 ID=cds-WP_005604607.1;Parent=gene-D1109_RS10165;Dbxref=Genbank:WP_005604607.1;Name=WP_005604607.1;Ontology_term=GO:0009102,GO:0004141;gbkey=CDS;gene=bioD;go_function=dethiobiotin synthase activity|0004141||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604607.1;locus_tag=D1109_RS10165;product=dethiobiotin synthase;protein_id=WP_005604607.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2100472 2101014 . + . ID=gene-D1109_RS10170;Name=smrB;gbkey=Gene;gene=smrB;gene_biotype=protein_coding;locus_tag=D1109_RS10170;old_locus_tag=D1109_10185 NZ_CP031858.1 Protein Homology CDS 2100472 2101014 . + 0 ID=cds-WP_005597623.1;Parent=gene-D1109_RS10170;Dbxref=Genbank:WP_005597623.1;Name=WP_005597623.1;gbkey=CDS;gene=smrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597623.1;locus_tag=D1109_RS10170;product=endonuclease SmrB;protein_id=WP_005597623.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2101130 2101993 . + . ID=gene-D1109_RS10175;Name=D1109_RS10175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10175;old_locus_tag=D1109_10190 NZ_CP031858.1 Protein Homology CDS 2101130 2101993 . + 0 ID=cds-WP_005597621.1;Parent=gene-D1109_RS10175;Dbxref=Genbank:WP_005597621.1;Name=WP_005597621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651782.1;locus_tag=D1109_RS10175;product=membrane protein;protein_id=WP_005597621.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2102099 2103949 . + . ID=gene-D1109_RS10180;Name=D1109_RS10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10180;old_locus_tag=D1109_10195 NZ_CP031858.1 Protein Homology CDS 2102099 2103949 . + 0 ID=cds-WP_237611080.1;Parent=gene-D1109_RS10180;Dbxref=Genbank:WP_237611080.1;Name=WP_237611080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874855.1;locus_tag=D1109_RS10180;product=ATP-binding protein;protein_id=WP_237611080.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2103969 2104532 . - . ID=gene-D1109_RS10185;Name=D1109_RS10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10185;old_locus_tag=D1109_10200 NZ_CP031858.1 Protein Homology CDS 2103969 2104532 . - 0 ID=cds-WP_005604606.1;Parent=gene-D1109_RS10185;Dbxref=Genbank:WP_005604606.1;Name=WP_005604606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604606.1;locus_tag=D1109_RS10185;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_005604606.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2104618 2106099 . - . ID=gene-D1109_RS10190;Name=D1109_RS10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10190;old_locus_tag=D1109_10205 NZ_CP031858.1 Protein Homology CDS 2104618 2106099 . - 0 ID=cds-WP_005612286.1;Parent=gene-D1109_RS10190;Dbxref=Genbank:WP_005612286.1;Name=WP_005612286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597616.1;locus_tag=D1109_RS10190;product=outer membrane protein transport protein;protein_id=WP_005612286.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2106589 2107041 . + . ID=gene-D1109_RS10195;Name=D1109_RS10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10195;old_locus_tag=D1109_10210 NZ_CP031858.1 Protein Homology CDS 2106589 2107041 . + 0 ID=cds-WP_005612284.1;Parent=gene-D1109_RS10195;Dbxref=Genbank:WP_005612284.1;Name=WP_005612284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651778.1;locus_tag=D1109_RS10195;product=Rrf2 family transcriptional regulator;protein_id=WP_005612284.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2107096 2108322 . + . ID=gene-D1109_RS10200;Name=D1109_RS10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10200;old_locus_tag=D1109_10215 NZ_CP031858.1 Protein Homology CDS 2107096 2108322 . + 0 ID=cds-WP_005612282.1;Parent=gene-D1109_RS10200;Dbxref=Genbank:WP_005612282.1;Name=WP_005612282.1;Ontology_term=GO:0044571,GO:0030170,GO:0031071;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=[2Fe-2S] cluster assembly|0044571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597612.1;locus_tag=D1109_RS10200;product=IscS subfamily cysteine desulfurase;protein_id=WP_005612282.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2108455 2108838 . + . ID=gene-D1109_RS10205;Name=iscU;gbkey=Gene;gene=iscU;gene_biotype=protein_coding;locus_tag=D1109_RS10205;old_locus_tag=D1109_10220 NZ_CP031858.1 Protein Homology CDS 2108455 2108838 . + 0 ID=cds-WP_005597611.1;Parent=gene-D1109_RS10205;Dbxref=Genbank:WP_005597611.1;Name=WP_005597611.1;Ontology_term=GO:0016226,GO:0005198;gbkey=CDS;gene=iscU;go_function=structural molecule activity|0005198||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248383.1;locus_tag=D1109_RS10205;product=Fe-S cluster assembly scaffold IscU;protein_id=WP_005597611.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2108980 2109303 . + . ID=gene-D1109_RS10210;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=D1109_RS10210;old_locus_tag=D1109_10225 NZ_CP031858.1 Protein Homology CDS 2108980 2109303 . + 0 ID=cds-WP_005597607.1;Parent=gene-D1109_RS10210;Dbxref=Genbank:WP_005597607.1;Name=WP_005597607.1;gbkey=CDS;gene=iscA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012340699.1;locus_tag=D1109_RS10210;product=iron-sulfur cluster assembly protein IscA;protein_id=WP_005597607.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2109313 2109834 . + . ID=gene-D1109_RS10215;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=D1109_RS10215;old_locus_tag=D1109_10230 NZ_CP031858.1 Protein Homology CDS 2109313 2109834 . + 0 ID=cds-WP_237611081.1;Parent=gene-D1109_RS10215;Dbxref=Genbank:WP_237611081.1;Name=WP_237611081.1;gbkey=CDS;gene=hscB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604604.1;locus_tag=D1109_RS10215;product=Fe-S protein assembly co-chaperone HscB;protein_id=WP_237611081.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2109882 2110334 . + . ID=gene-D1109_RS10220;Name=D1109_RS10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10220;old_locus_tag=D1109_10235 NZ_CP031858.1 Protein Homology CDS 2109882 2110334 . + 0 ID=cds-WP_237586321.1;Parent=gene-D1109_RS10220;Dbxref=Genbank:WP_237586321.1;Name=WP_237586321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874857.1;locus_tag=D1109_RS10220;product=DMT family transporter;protein_id=WP_237586321.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2110362 2110994 . + . ID=gene-D1109_RS10225;Name=D1109_RS10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10225;old_locus_tag=D1109_10240 NZ_CP031858.1 Protein Homology CDS 2110362 2110994 . + 0 ID=cds-WP_237586320.1;Parent=gene-D1109_RS10225;Dbxref=Genbank:WP_237586320.1;Name=WP_237586320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651773.1;locus_tag=D1109_RS10225;product=DUF2625 domain-containing protein;protein_id=WP_237586320.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2111113 2112966 . + . ID=gene-D1109_RS10230;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=D1109_RS10230;old_locus_tag=D1109_10245 NZ_CP031858.1 Protein Homology CDS 2111113 2112966 . + 0 ID=cds-WP_009874858.1;Parent=gene-D1109_RS10230;Dbxref=Genbank:WP_009874858.1;Name=WP_009874858.1;Ontology_term=GO:0006457,GO:0005515;gbkey=CDS;gene=hscA;go_function=protein binding|0005515||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991187.1;locus_tag=D1109_RS10230;product=Fe-S protein assembly chaperone HscA;protein_id=WP_009874858.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2113087 2113428 . + . ID=gene-D1109_RS10235;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;locus_tag=D1109_RS10235;old_locus_tag=D1109_10250 NZ_CP031858.1 Protein Homology CDS 2113087 2113428 . + 0 ID=cds-WP_005619225.1;Parent=gene-D1109_RS10235;Dbxref=Genbank:WP_005619225.1;Name=WP_005619225.1;Ontology_term=GO:0016226;gbkey=CDS;gene=fdx;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006717450.1;locus_tag=D1109_RS10235;product=ISC system 2Fe-2S type ferredoxin;protein_id=WP_005619225.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2113428 2113622 . + . ID=gene-D1109_RS10240;Name=iscX;gbkey=Gene;gene=iscX;gene_biotype=protein_coding;locus_tag=D1109_RS10240;old_locus_tag=D1109_10255 NZ_CP031858.1 Protein Homology CDS 2113428 2113622 . + 0 ID=cds-WP_237611082.1;Parent=gene-D1109_RS10240;Dbxref=Genbank:WP_237611082.1;Name=WP_237611082.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=iscX;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005656371.1;locus_tag=D1109_RS10240;product=Fe-S cluster assembly protein IscX;protein_id=WP_237611082.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2114648 2116063 . - . ID=gene-D1109_RS10245;Name=D1109_RS10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10245;old_locus_tag=D1109_10270 NZ_CP031858.1 Protein Homology CDS 2114648 2116063 . - 0 ID=cds-WP_005608089.1;Parent=gene-D1109_RS10245;Dbxref=Genbank:WP_005608089.1;Name=WP_005608089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604600.1;locus_tag=D1109_RS10245;product=surface lipoprotein assembly modifier;protein_id=WP_005608089.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2116119 2117375 . - . ID=gene-D1109_RS10250;Name=D1109_RS10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10250;old_locus_tag=D1109_10275 NZ_CP031858.1 Protein Homology CDS 2116119 2117375 . - 0 ID=cds-WP_009874639.1;Parent=gene-D1109_RS10250;Dbxref=Genbank:WP_009874639.1;Name=WP_009874639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991188.1;locus_tag=D1109_RS10250;product=membrane protein;protein_id=WP_009874639.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2117562 2119910 . + . ID=gene-D1109_RS10255;Name=D1109_RS10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10255;old_locus_tag=D1109_10280 NZ_CP031858.1 Protein Homology CDS 2117562 2119910 . + 0 ID=cds-WP_005604598.1;Parent=gene-D1109_RS10255;Dbxref=Genbank:WP_005604598.1;Name=WP_005604598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005612269.1;locus_tag=D1109_RS10255;product=TonB-dependent receptor;protein_id=WP_005604598.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2119956 2121289 . - . ID=gene-D1109_RS10260;Name=D1109_RS10260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10260;old_locus_tag=D1109_10285 NZ_CP031858.1 Protein Homology CDS 2120836 2121289 . - 0 ID=cds-WP_237611083.1;Parent=gene-D1109_RS10260;Dbxref=Genbank:WP_237611083.1;Name=WP_237611083.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612109.1;locus_tag=D1109_RS10260;product=IS3 family transposase;protein_id=WP_237611083.1;transl_table=11 NZ_CP031858.1 Protein Homology CDS 2119956 2120836 . - 2 ID=cds-WP_237611083.1;Parent=gene-D1109_RS10260;Dbxref=Genbank:WP_237611083.1;Name=WP_237611083.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612109.1;locus_tag=D1109_RS10260;product=IS3 family transposase;protein_id=WP_237611083.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2121361 2122596 . - . ID=gene-D1109_RS10265;Name=D1109_RS10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10265;old_locus_tag=D1109_10290 NZ_CP031858.1 Protein Homology CDS 2121361 2122596 . - 0 ID=cds-WP_005597568.1;Parent=gene-D1109_RS10265;Dbxref=Genbank:WP_005597568.1;Name=WP_005597568.1;Ontology_term=GO:0001680,GO:0004810,GO:0005524;gbkey=CDS;go_function=tRNA adenylyltransferase activity|0004810||IEA,ATP binding|0005524||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597568.1;locus_tag=D1109_RS10265;product=multifunctional CCA addition/repair protein;protein_id=WP_005597568.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2122700 2123209 . - . ID=gene-D1109_RS10270;Name=D1109_RS10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10270;old_locus_tag=D1109_10295 NZ_CP031858.1 Protein Homology CDS 2122700 2123209 . - 0 ID=cds-WP_005597566.1;Parent=gene-D1109_RS10270;Dbxref=Genbank:WP_005597566.1;Name=WP_005597566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651768.1;locus_tag=D1109_RS10270;product=peptidylprolyl isomerase;protein_id=WP_005597566.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2123354 2124733 . + . ID=gene-D1109_RS10275;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=D1109_RS10275;old_locus_tag=D1109_10300 NZ_CP031858.1 Protein Homology CDS 2123354 2124733 . + 0 ID=cds-WP_237611084.1;Parent=gene-D1109_RS10275;Dbxref=Genbank:WP_237611084.1;Name=WP_237611084.1;Ontology_term=GO:0006423,GO:0004817;gbkey=CDS;gene=cysS;go_function=cysteine-tRNA ligase activity|0004817||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597564.1;locus_tag=D1109_RS10275;product=cysteine--tRNA ligase;protein_id=WP_237611084.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2124931 2125965 . + . ID=gene-D1109_RS10280;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=D1109_RS10280;old_locus_tag=D1109_10310 NZ_CP031858.1 Protein Homology CDS 2124931 2125965 . + 0 ID=cds-WP_005608070.1;Parent=gene-D1109_RS10280;Dbxref=Genbank:WP_005608070.1;Name=WP_005608070.1;Ontology_term=GO:0048473,GO:0005524,GO:0033232,GO:0009898,GO:0055052;gbkey=CDS;gene=metN;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-methionine transporter activity|0033232||IEA;go_process=D-methionine transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991200.1;locus_tag=D1109_RS10280;product=methionine ABC transporter ATP-binding protein MetN;protein_id=WP_005608070.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2125955 2126632 . + . ID=gene-D1109_RS10285;Name=D1109_RS10285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10285;old_locus_tag=D1109_10315 NZ_CP031858.1 Protein Homology CDS 2125955 2126632 . + 0 ID=cds-WP_005612252.1;Parent=gene-D1109_RS10285;Dbxref=Genbank:WP_005612252.1;Name=WP_005612252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597560.1;locus_tag=D1109_RS10285;product=ABC transporter permease;protein_id=WP_005612252.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2126658 2127479 . + . ID=gene-D1109_RS10290;Name=D1109_RS10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10290;old_locus_tag=D1109_10320 NZ_CP031858.1 Protein Homology CDS 2126658 2127479 . + 0 ID=cds-WP_237611085.1;Parent=gene-D1109_RS10290;Dbxref=Genbank:WP_237611085.1;Name=WP_237611085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874634.1;locus_tag=D1109_RS10290;product=MetQ/NlpA family lipoprotein;protein_id=WP_237611085.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2127593 2128411 . + . ID=gene-D1109_RS10295;Name=D1109_RS10295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10295;old_locus_tag=D1109_10325 NZ_CP031858.1 Protein Homology CDS 2127593 2128411 . + 0 ID=cds-WP_237611086.1;Parent=gene-D1109_RS10295;Dbxref=Genbank:WP_237611086.1;Name=WP_237611086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604593.1;locus_tag=D1109_RS10295;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_237611086.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2128466 2129350 . - . ID=gene-D1109_RS10300;Name=D1109_RS10300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10300;old_locus_tag=D1109_10330 NZ_CP031858.1 Protein Homology CDS 2128466 2129350 . - 0 ID=cds-WP_237611087.1;Parent=gene-D1109_RS10300;Dbxref=Genbank:WP_237611087.1;Name=WP_237611087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005601245.1;locus_tag=D1109_RS10300;product=LysR family transcriptional regulator;protein_id=WP_237611087.1;transl_table=11 NZ_CP031858.1 RefSeq pseudogene 2129509 2130644 . + . ID=gene-D1109_RS10305;Name=D1109_RS10305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D1109_RS10305;old_locus_tag=D1109_10335;pseudo=true NZ_CP031858.1 Protein Homology CDS 2129509 2130644 . + 0 ID=cds-D1109_RS10305;Parent=gene-D1109_RS10305;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263020.1;locus_tag=D1109_RS10305;product=alpha/beta hydrolase;pseudo=true;transl_table=11 NZ_CP031858.1 RefSeq gene 2130729 2131301 . + . ID=gene-D1109_RS10310;Name=D1109_RS10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10310;old_locus_tag=D1109_10340 NZ_CP031858.1 Protein Homology CDS 2130729 2131301 . + 0 ID=cds-WP_237611088.1;Parent=gene-D1109_RS10310;Dbxref=Genbank:WP_237611088.1;Name=WP_237611088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597444.1;locus_tag=D1109_RS10310;product=sugar O-acetyltransferase;protein_id=WP_237611088.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2131360 2131698 . + . ID=gene-D1109_RS10315;Name=D1109_RS10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10315;old_locus_tag=D1109_10345 NZ_CP031858.1 Protein Homology CDS 2131360 2131698 . + 0 ID=cds-WP_237611496.1;Parent=gene-D1109_RS10315;Dbxref=Genbank:WP_237611496.1;Name=WP_237611496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017357653.1;locus_tag=D1109_RS10315;product=cyclophilin-like fold protein;protein_id=WP_237611496.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2131777 2132481 . - . ID=gene-D1109_RS10320;Name=D1109_RS10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10320;old_locus_tag=D1109_10350 NZ_CP031858.1 Protein Homology CDS 2131777 2132481 . - 0 ID=cds-WP_237611089.1;Parent=gene-D1109_RS10320;Dbxref=Genbank:WP_237611089.1;Name=WP_237611089.1;Ontology_term=GO:0016773;gbkey=CDS;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005617398.1;locus_tag=D1109_RS10320;product=3-deoxy-D-manno-octulosonic acid kinase;protein_id=WP_237611089.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2132582 2133238 . + . ID=gene-D1109_RS10325;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=D1109_RS10325;old_locus_tag=D1109_10355 NZ_CP031858.1 Protein Homology CDS 2132582 2133238 . + 0 ID=cds-WP_005601234.1;Parent=gene-D1109_RS10325;Dbxref=Genbank:WP_005601234.1;Name=WP_005601234.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005601234.1;locus_tag=D1109_RS10325;product=GTP cyclohydrolase I FolE;protein_id=WP_005601234.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2133317 2134105 . + . ID=gene-D1109_RS10330;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=D1109_RS10330;old_locus_tag=D1109_10360 NZ_CP031858.1 Protein Homology CDS 2133317 2134105 . + 0 ID=cds-WP_009874627.1;Parent=gene-D1109_RS10330;Dbxref=Genbank:WP_009874627.1;Name=WP_009874627.1;Ontology_term=GO:0006400,GO:0009982;gbkey=CDS;gene=truA;go_function=pseudouridine synthase activity|0009982||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011848489.1;locus_tag=D1109_RS10330;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_009874627.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2134164 2134478 . - . ID=gene-D1109_RS10335;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=D1109_RS10335;old_locus_tag=D1109_10365 NZ_CP031858.1 Protein Homology CDS 2134164 2134478 . - 0 ID=cds-WP_005597433.1;Parent=gene-D1109_RS10335;Dbxref=Genbank:WP_005597433.1;Name=WP_005597433.1;Ontology_term=GO:0009386,GO:0045182,GO:0005840,GO:0022626;gbkey=CDS;gene=raiA;go_component=ribosome|0005840||IEA,cytosolic ribosome|0022626||IEA;go_function=translation regulator activity|0045182||IEA;go_process=translational attenuation|0009386||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597433.1;locus_tag=D1109_RS10335;product=ribosome-associated translation inhibitor RaiA;protein_id=WP_005597433.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2134643 2135584 . + . ID=gene-D1109_RS10340;Name=D1109_RS10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10340;old_locus_tag=D1109_10370 NZ_CP031858.1 Protein Homology CDS 2134643 2135584 . + 0 ID=cds-WP_237611090.1;Parent=gene-D1109_RS10340;Dbxref=Genbank:WP_237611090.1;Name=WP_237611090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604585.1;locus_tag=D1109_RS10340;product=LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferasee;protein_id=WP_237611090.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2135743 2136630 . + . ID=gene-D1109_RS10345;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=D1109_RS10345;old_locus_tag=D1109_10375 NZ_CP031858.1 Protein Homology CDS 2135743 2136630 . + 0 ID=cds-WP_011848488.1;Parent=gene-D1109_RS10345;Dbxref=Genbank:WP_011848488.1;Name=WP_011848488.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991214.1;locus_tag=D1109_RS10345;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_011848488.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2136728 2138266 . - . ID=gene-D1109_RS10350;Name=D1109_RS10350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10350;old_locus_tag=D1109_10380 NZ_CP031858.1 Protein Homology CDS 2136728 2138266 . - 0 ID=cds-WP_237611091.1;Parent=gene-D1109_RS10350;Dbxref=Genbank:WP_237611091.1;Name=WP_237611091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874624.1;locus_tag=D1109_RS10350;product=OFA family MFS transporter;protein_id=WP_237611091.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2138411 2139268 . - . ID=gene-D1109_RS10355;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=D1109_RS10355;old_locus_tag=D1109_10385 NZ_CP031858.1 Protein Homology CDS 2138411 2139268 . - 0 ID=cds-WP_237611092.1;Parent=gene-D1109_RS10355;Dbxref=Genbank:WP_237611092.1;Name=WP_237611092.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991216.1;locus_tag=D1109_RS10355;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_237611092.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2139457 2139533 . + . ID=gene-D1109_RS10360;Name=D1109_RS10360;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS10360;old_locus_tag=D1109_10390 NZ_CP031858.1 tRNAscan-SE tRNA 2139457 2139533 . + . ID=rna-D1109_RS10360;Parent=gene-D1109_RS10360;anticodon=(pos:2139491..2139493);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS10360;product=tRNA-Pro NZ_CP031858.1 tRNAscan-SE exon 2139457 2139533 . + . ID=exon-D1109_RS10360-1;Parent=rna-D1109_RS10360;anticodon=(pos:2139491..2139493);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS10360;product=tRNA-Pro NZ_CP031858.1 RefSeq gene 2139579 2139655 . + . ID=gene-D1109_RS10365;Name=D1109_RS10365;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS10365;old_locus_tag=D1109_10395 NZ_CP031858.1 tRNAscan-SE tRNA 2139579 2139655 . + . ID=rna-D1109_RS10365;Parent=gene-D1109_RS10365;anticodon=(pos:2139613..2139615);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS10365;product=tRNA-Arg NZ_CP031858.1 tRNAscan-SE exon 2139579 2139655 . + . ID=exon-D1109_RS10365-1;Parent=rna-D1109_RS10365;anticodon=(pos:2139613..2139615);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS10365;product=tRNA-Arg NZ_CP031858.1 RefSeq gene 2139874 2140791 . - . ID=gene-D1109_RS10370;Name=fdhE;gbkey=Gene;gene=fdhE;gene_biotype=protein_coding;locus_tag=D1109_RS10370;old_locus_tag=D1109_10405 NZ_CP031858.1 Protein Homology CDS 2139874 2140791 . - 0 ID=cds-WP_237611093.1;Parent=gene-D1109_RS10370;Dbxref=Genbank:WP_237611093.1;Name=WP_237611093.1;gbkey=CDS;gene=fdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005622482.1;locus_tag=D1109_RS10370;product=formate dehydrogenase accessory protein FdhE;protein_id=WP_237611093.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2140901 2141572 . - . ID=gene-D1109_RS10375;Name=D1109_RS10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10375;old_locus_tag=D1109_10410 NZ_CP031858.1 Protein Homology CDS 2140901 2141572 . - 0 ID=cds-WP_237611094.1;Parent=gene-D1109_RS10375;Dbxref=Genbank:WP_237611094.1;Name=WP_237611094.1;Ontology_term=GO:0009061,GO:0008863,GO:0009055,GO:0009326;gbkey=CDS;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597421.1;locus_tag=D1109_RS10375;product=formate dehydrogenase subunit gamma;protein_id=WP_237611094.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2141565 2142464 . - . ID=gene-D1109_RS10380;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=D1109_RS10380;old_locus_tag=D1109_10415 NZ_CP031858.1 Protein Homology CDS 2141565 2142464 . - 0 ID=cds-WP_005601225.1;Parent=gene-D1109_RS10380;Dbxref=Genbank:WP_005601225.1;Name=WP_005601225.1;Ontology_term=GO:0045333,GO:0008863;gbkey=CDS;gene=fdxH;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=cellular respiration|0045333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604568.1;locus_tag=D1109_RS10380;product=formate dehydrogenase subunit beta;protein_id=WP_005601225.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2142464 2145523 . - . ID=gene-D1109_RS10385;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=D1109_RS10385;old_locus_tag=D1109_10420 NZ_CP031858.1 Protein Homology CDS 2142464 2145523 . - 0 ID=cds-WP_237611095.1;Parent=gene-D1109_RS10385;Dbxref=Genbank:WP_237611095.1;Name=WP_237611095.1;Ontology_term=GO:0015942,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014550636.1;locus_tag=D1109_RS10385;product=formate dehydrogenase-N subunit alpha;protein_id=WP_237611095.1;transl_except=(pos:complement(2144936..2144938)%2Caa:Sec);transl_table=11 NZ_CP031858.1 RefSeq gene 2145942 2146748 . + . ID=gene-D1109_RS10390;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=D1109_RS10390;old_locus_tag=D1109_10425 NZ_CP031858.1 Protein Homology CDS 2145942 2146748 . + 0 ID=cds-WP_237611096.1;Parent=gene-D1109_RS10390;Dbxref=Genbank:WP_237611096.1;Name=WP_237611096.1;Ontology_term=GO:0009061,GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005608043.1;locus_tag=D1109_RS10390;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_237611096.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2146750 2147682 . + . ID=gene-D1109_RS10395;Name=D1109_RS10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10395;old_locus_tag=D1109_10430 NZ_CP031858.1 Protein Homology CDS 2146750 2147682 . + 0 ID=cds-WP_005601223.1;Parent=gene-D1109_RS10395;Dbxref=Genbank:WP_005601223.1;Name=WP_005601223.1;Ontology_term=GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005601223.1;locus_tag=D1109_RS10395;product=AEC family transporter;protein_id=WP_005601223.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2147765 2149180 . - . ID=gene-D1109_RS10400;Name=D1109_RS10400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10400;old_locus_tag=D1109_10435 NZ_CP031858.1 Protein Homology CDS 2147765 2149180 . - 0 ID=cds-WP_237611097.1;Parent=gene-D1109_RS10400;Dbxref=Genbank:WP_237611097.1;Name=WP_237611097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005612219.1;locus_tag=D1109_RS10400;product=YdgA family protein;protein_id=WP_237611097.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2149271 2151388 . - . ID=gene-D1109_RS10405;Name=D1109_RS10405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10405;old_locus_tag=D1109_10440 NZ_CP031858.1 Protein Homology CDS 2149271 2151388 . - 0 ID=cds-WP_237611098.1;Parent=gene-D1109_RS10405;Dbxref=Genbank:WP_237611098.1;Name=WP_237611098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597407.1;locus_tag=D1109_RS10405;product=3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein;protein_id=WP_237611098.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2151398 2152702 . - . ID=gene-D1109_RS10410;Name=D1109_RS10410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10410;old_locus_tag=D1109_10445 NZ_CP031858.1 Protein Homology CDS 2151398 2152702 . - 0 ID=cds-WP_005601217.1;Parent=gene-D1109_RS10410;Dbxref=Genbank:WP_005601217.1;Name=WP_005601217.1;Ontology_term=GO:0006631,GO:0003985;gbkey=CDS;go_function=acetyl-CoA C-acetyltransferase activity|0003985||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263011.1;locus_tag=D1109_RS10410;product=acetyl-CoA C-acyltransferase;protein_id=WP_005601217.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2152912 2153544 . - . ID=gene-D1109_RS10415;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=D1109_RS10415;old_locus_tag=D1109_10450 NZ_CP031858.1 Protein Homology CDS 2152912 2153544 . - 0 ID=cds-WP_005597404.1;Parent=gene-D1109_RS10415;Dbxref=Genbank:WP_005597404.1;Name=WP_005597404.1;Ontology_term=GO:0006284,GO:0003906;gbkey=CDS;gene=nth;go_function=DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005721589.1;locus_tag=D1109_RS10415;product=endonuclease III;protein_id=WP_005597404.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2153545 2154321 . - . ID=gene-D1109_RS10420;Name=D1109_RS10420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10420;old_locus_tag=D1109_10455 NZ_CP031858.1 Protein Homology CDS 2153545 2154321 . - 0 ID=cds-WP_005597402.1;Parent=gene-D1109_RS10420;Dbxref=Genbank:WP_005597402.1;Name=WP_005597402.1;Ontology_term=GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597402.1;locus_tag=D1109_RS10420;product=TSUP family transporter;protein_id=WP_005597402.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2154334 2155425 . - . ID=gene-D1109_RS10425;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=D1109_RS10425;old_locus_tag=D1109_10460 NZ_CP031858.1 Protein Homology CDS 2154334 2155425 . - 0 ID=cds-WP_005601213.1;Parent=gene-D1109_RS10425;Dbxref=Genbank:WP_005601213.1;Name=WP_005601213.1;Ontology_term=GO:0006561,GO:0004349;gbkey=CDS;gene=proB;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005601213.1;locus_tag=D1109_RS10425;product=glutamate 5-kinase;protein_id=WP_005601213.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2155512 2156000 . + . ID=gene-D1109_RS10430;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=D1109_RS10430;old_locus_tag=D1109_10465 NZ_CP031858.1 Protein Homology CDS 2155512 2156000 . + 0 ID=cds-WP_005597400.1;Parent=gene-D1109_RS10430;Dbxref=Genbank:WP_005597400.1;Name=WP_005597400.1;Ontology_term=GO:0046654;gbkey=CDS;gene=folA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597400.1;locus_tag=D1109_RS10430;product=type 3 dihydrofolate reductase;protein_id=WP_005597400.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2156127 2156360 . + . ID=gene-D1109_RS10435;Name=D1109_RS10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10435;old_locus_tag=D1109_10470 NZ_CP031858.1 Protein Homology CDS 2156127 2156360 . + 0 ID=cds-WP_005597399.1;Parent=gene-D1109_RS10435;Dbxref=Genbank:WP_005597399.1;Name=WP_005597399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597399.1;locus_tag=D1109_RS10435;product=YgjV family protein;protein_id=WP_005597399.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2156404 2157783 . - . ID=gene-D1109_RS10440;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=D1109_RS10440;old_locus_tag=D1109_10475 NZ_CP031858.1 Protein Homology CDS 2156404 2157783 . - 0 ID=cds-WP_005601211.1;Parent=gene-D1109_RS10440;Dbxref=Genbank:WP_005601211.1;Name=WP_005601211.1;Ontology_term=GO:0006281,GO:0005524;gbkey=CDS;gene=radA;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991736.1;locus_tag=D1109_RS10440;product=DNA repair protein RadA;protein_id=WP_005601211.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2157965 2158411 . + . ID=gene-D1109_RS10445;Name=D1109_RS10445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10445;old_locus_tag=D1109_10480 NZ_CP031858.1 Protein Homology CDS 2157965 2158411 . + 0 ID=cds-WP_237611099.1;Parent=gene-D1109_RS10445;Dbxref=Genbank:WP_237611099.1;Name=WP_237611099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597397.1;locus_tag=D1109_RS10445;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_237611099.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2158429 2159823 . + . ID=gene-D1109_RS10450;Name=D1109_RS10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10450;old_locus_tag=D1109_10485 NZ_CP031858.1 Protein Homology CDS 2158429 2159823 . + 0 ID=cds-WP_005601209.1;Parent=gene-D1109_RS10450;Dbxref=Genbank:WP_005601209.1;Name=WP_005601209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005615186.1;locus_tag=D1109_RS10450;product=GspE/PulE family protein;protein_id=WP_005601209.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2159807 2161012 . + . ID=gene-D1109_RS10455;Name=D1109_RS10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10455;old_locus_tag=D1109_10490 NZ_CP031858.1 Protein Homology CDS 2159807 2161012 . + 0 ID=cds-WP_237611100.1;Parent=gene-D1109_RS10455;Dbxref=Genbank:WP_237611100.1;Name=WP_237611100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011848486.1;locus_tag=D1109_RS10455;product=type II secretion system F family protein;protein_id=WP_237611100.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2161009 2161674 . + . ID=gene-D1109_RS10460;Name=D1109_RS10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10460;old_locus_tag=D1109_10495 NZ_CP031858.1 Protein Homology CDS 2161009 2161674 . + 0 ID=cds-WP_005601204.1;Parent=gene-D1109_RS10460;Dbxref=Genbank:WP_005601204.1;Name=WP_005601204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005601204.1;locus_tag=D1109_RS10460;product=prepilin peptidase;protein_id=WP_005601204.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2161696 2162334 . + . ID=gene-D1109_RS10465;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=D1109_RS10465;old_locus_tag=D1109_10500 NZ_CP031858.1 Protein Homology CDS 2161696 2162334 . + 0 ID=cds-WP_115586748.1;Parent=gene-D1109_RS10465;Dbxref=Genbank:WP_115586748.1;Name=WP_115586748.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140;gbkey=CDS;gene=coaE;go_function=dephospho-CoA kinase activity|0004140||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874616.1;locus_tag=D1109_RS10465;product=dephospho-CoA kinase;protein_id=WP_115586748.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2162316 2162504 . + . ID=gene-D1109_RS10470;Name=yacG;gbkey=Gene;gene=yacG;gene_biotype=protein_coding;locus_tag=D1109_RS10470;old_locus_tag=D1109_10505 NZ_CP031858.1 Protein Homology CDS 2162316 2162504 . + 0 ID=cds-WP_115589824.1;Parent=gene-D1109_RS10470;Dbxref=Genbank:WP_115589824.1;Name=WP_115589824.1;Ontology_term=GO:0006355;gbkey=CDS;gene=yacG;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005623139.1;locus_tag=D1109_RS10470;product=DNA gyrase inhibitor YacG;protein_id=WP_115589824.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2162581 2163606 . - . ID=gene-D1109_RS10475;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=D1109_RS10475;old_locus_tag=D1109_10510 NZ_CP031858.1 Protein Homology CDS 2162581 2163606 . - 0 ID=cds-WP_005612206.1;Parent=gene-D1109_RS10475;Dbxref=Genbank:WP_005612206.1;Name=WP_005612206.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=holA;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005623136.1;locus_tag=D1109_RS10475;product=DNA polymerase III subunit delta;protein_id=WP_005612206.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2163715 2164209 . - . ID=gene-D1109_RS10480;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=D1109_RS10480;old_locus_tag=D1109_10515 NZ_CP031858.1 Protein Homology CDS 2163715 2164209 . - 0 ID=cds-WP_005597385.1;Parent=gene-D1109_RS10480;Dbxref=Genbank:WP_005597385.1;Name=WP_005597385.1;Ontology_term=GO:0019867;gbkey=CDS;gene=lptE;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651848.1;locus_tag=D1109_RS10480;product=LPS assembly lipoprotein LptE;protein_id=WP_005597385.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2164309 2166894 . - . ID=gene-D1109_RS10485;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=D1109_RS10485;old_locus_tag=D1109_10520 NZ_CP031858.1 Protein Homology CDS 2164309 2166894 . - 0 ID=cds-WP_005601197.1;Parent=gene-D1109_RS10485;Dbxref=Genbank:WP_005601197.1;Name=WP_005601197.1;Ontology_term=GO:0006429,GO:0004823;gbkey=CDS;gene=leuS;go_function=leucine-tRNA ligase activity|0004823||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005601197.1;locus_tag=D1109_RS10485;product=leucine--tRNA ligase;protein_id=WP_005601197.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2167145 2167849 . + . ID=gene-D1109_RS10490;Name=pepE;gbkey=Gene;gene=pepE;gene_biotype=protein_coding;locus_tag=D1109_RS10490;old_locus_tag=D1109_10525 NZ_CP031858.1 Protein Homology CDS 2167145 2167849 . + 0 ID=cds-WP_005612204.1;Parent=gene-D1109_RS10490;Dbxref=Genbank:WP_005612204.1;Name=WP_005612204.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=pepE;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005617371.1;locus_tag=D1109_RS10490;product=dipeptidase PepE;protein_id=WP_005612204.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2167860 2169152 . + . ID=gene-D1109_RS10495;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=D1109_RS10495;old_locus_tag=D1109_10530 NZ_CP031858.1 Protein Homology CDS 2167860 2169152 . + 0 ID=cds-WP_005597377.1;Parent=gene-D1109_RS10495;Dbxref=Genbank:WP_005597377.1;Name=WP_005597377.1;Ontology_term=GO:0015740,GO:0015556,GO:0016021;gbkey=CDS;gene=dcuC;go_component=integral component of membrane|0016021||IEA;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011200725.1;locus_tag=D1109_RS10495;product=C4-dicarboxylate transporter DcuC;protein_id=WP_005597377.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2169246 2170514 . + . ID=gene-D1109_RS10500;Name=D1109_RS10500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10500;old_locus_tag=D1109_10535 NZ_CP031858.1 Protein Homology CDS 2169246 2170514 . + 0 ID=cds-WP_043991820.1;Parent=gene-D1109_RS10500;Dbxref=Genbank:WP_043991820.1;Name=WP_043991820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005620707.1;locus_tag=D1109_RS10500;product=M20 family metallo-hydrolase;protein_id=WP_043991820.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2170585 2171892 . - . ID=gene-D1109_RS10505;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=D1109_RS10505;old_locus_tag=D1109_10540 NZ_CP031858.1 Protein Homology CDS 2170585 2171892 . - 0 ID=cds-WP_237611101.1;Parent=gene-D1109_RS10505;Dbxref=Genbank:WP_237611101.1;Name=WP_237611101.1;Ontology_term=GO:0006434,GO:0004828;gbkey=CDS;gene=serS;go_function=serine-tRNA ligase activity|0004828||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874613.1;locus_tag=D1109_RS10505;product=serine--tRNA ligase;protein_id=WP_237611101.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2172010 2172489 . - . ID=gene-D1109_RS10510;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=D1109_RS10510;old_locus_tag=D1109_10545 NZ_CP031858.1 Protein Homology CDS 2172010 2172489 . - 0 ID=cds-WP_005601189.1;Parent=gene-D1109_RS10510;Dbxref=Genbank:WP_005601189.1;Name=WP_005601189.1;gbkey=CDS;gene=smpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248414.1;locus_tag=D1109_RS10510;product=SsrA-binding protein SmpB;protein_id=WP_005601189.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2172623 2174032 . - . ID=gene-D1109_RS10515;Name=D1109_RS10515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10515;old_locus_tag=D1109_10550 NZ_CP031858.1 Protein Homology CDS 2172623 2174032 . - 0 ID=cds-WP_012478448.1;Parent=gene-D1109_RS10515;Dbxref=Genbank:WP_012478448.1;Name=WP_012478448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651853.1;locus_tag=D1109_RS10515;product=YcjX family protein;protein_id=WP_012478448.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2174100 2174939 . + . ID=gene-D1109_RS10520;Name=D1109_RS10520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10520;old_locus_tag=D1109_10555 NZ_CP031858.1 Protein Homology CDS 2174100 2174939 . + 0 ID=cds-WP_237611102.1;Parent=gene-D1109_RS10520;Dbxref=Genbank:WP_237611102.1;Name=WP_237611102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005615178.1;locus_tag=D1109_RS10520;product=CYTH domain-containing protein;protein_id=WP_237611102.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2174984 2175436 . - . ID=gene-D1109_RS10525;Name=D1109_RS10525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10525;old_locus_tag=D1109_10560 NZ_CP031858.1 Protein Homology CDS 2174984 2175436 . - 0 ID=cds-WP_005601182.1;Parent=gene-D1109_RS10525;Dbxref=Genbank:WP_005601182.1;Name=WP_005601182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005612197.1;locus_tag=D1109_RS10525;product=hypothetical protein;protein_id=WP_005601182.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2175433 2175597 . - . ID=gene-D1109_RS10530;Name=D1109_RS10530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10530;old_locus_tag=D1109_10565 NZ_CP031858.1 Protein Homology CDS 2175433 2175597 . - 0 ID=cds-WP_005608004.1;Parent=gene-D1109_RS10530;Dbxref=Genbank:WP_005608004.1;Name=WP_005608004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005623110.1;locus_tag=D1109_RS10530;product=YoaH family protein;protein_id=WP_005608004.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2175599 2176342 . - . ID=gene-D1109_RS10535;Name=truC;gbkey=Gene;gene=truC;gene_biotype=protein_coding;locus_tag=D1109_RS10535;old_locus_tag=D1109_10570 NZ_CP031858.1 Protein Homology CDS 2175599 2176342 . - 0 ID=cds-WP_237611103.1;Parent=gene-D1109_RS10535;Dbxref=Genbank:WP_237611103.1;Name=WP_237611103.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=truC;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874610.1;locus_tag=D1109_RS10535;product=tRNA pseudouridine(65) synthase TruC;protein_id=WP_237611103.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2176343 2176654 . - . ID=gene-D1109_RS10540;Name=D1109_RS10540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10540;old_locus_tag=D1109_10575 NZ_CP031858.1 Protein Homology CDS 2176343 2176654 . - 0 ID=cds-WP_237611104.1;Parent=gene-D1109_RS10540;Dbxref=Genbank:WP_237611104.1;Name=WP_237611104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005623108.1;locus_tag=D1109_RS10540;product=YqcC family protein;protein_id=WP_237611104.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2176662 2177351 . - . ID=gene-D1109_RS10545;Name=D1109_RS10545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10545;old_locus_tag=D1109_10580 NZ_CP031858.1 Protein Homology CDS 2176662 2177351 . - 0 ID=cds-WP_237611105.1;Parent=gene-D1109_RS10545;Dbxref=Genbank:WP_237611105.1;Name=WP_237611105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005601177.1;locus_tag=D1109_RS10545;product=Fic family protein;protein_id=WP_237611105.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2177505 2178914 . + . ID=gene-D1109_RS10550;Name=trpCF;gbkey=Gene;gene=trpCF;gene_biotype=protein_coding;locus_tag=D1109_RS10550;old_locus_tag=D1109_10585 NZ_CP031858.1 Protein Homology CDS 2177505 2178914 . + 0 ID=cds-WP_237611106.1;Parent=gene-D1109_RS10550;Dbxref=Genbank:WP_237611106.1;Name=WP_237611106.1;Ontology_term=GO:0006568,GO:0004425,GO:0004640;gbkey=CDS;gene=trpCF;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA,phosphoribosylanthranilate isomerase activity|0004640||IEA;go_process=tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597365.1;locus_tag=D1109_RS10550;product=bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF;protein_id=WP_237611106.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2179126 2181129 . + . ID=gene-D1109_RS10555;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;locus_tag=D1109_RS10555;old_locus_tag=D1109_10590 NZ_CP031858.1 Protein Homology CDS 2179126 2181129 . + 0 ID=cds-WP_237611107.1;Parent=gene-D1109_RS10555;Dbxref=Genbank:WP_237611107.1;Name=WP_237611107.1;Ontology_term=GO:0008033,GO:0004808;gbkey=CDS;gene=mnmC;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity|0004808||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604515.1;locus_tag=D1109_RS10555;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;protein_id=WP_237611107.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2181308 2182687 . - . ID=gene-D1109_RS10560;Name=D1109_RS10560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10560;old_locus_tag=D1109_10595 NZ_CP031858.1 Protein Homology CDS 2181308 2182687 . - 0 ID=cds-WP_009874606.1;Parent=gene-D1109_RS10560;Dbxref=Genbank:WP_009874606.1;Name=WP_009874606.1;Ontology_term=GO:0009063,GO:0003941,GO:0051539;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=cellular amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000626422.1;locus_tag=D1109_RS10560;product=L-serine ammonia-lyase;protein_id=WP_009874606.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2182783 2184012 . - . ID=gene-D1109_RS10565;Name=D1109_RS10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10565;old_locus_tag=D1109_10600 NZ_CP031858.1 Protein Homology CDS 2182783 2184012 . - 0 ID=cds-WP_005607980.1;Parent=gene-D1109_RS10565;Dbxref=Genbank:WP_005607980.1;Name=WP_005607980.1;Ontology_term=GO:0006865,GO:0015171,GO:0005887;gbkey=CDS;go_component=integral component of plasma membrane|0005887||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005601171.1;locus_tag=D1109_RS10565;product=serine/threonine transporter;protein_id=WP_005607980.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2184369 2185964 . + . ID=gene-D1109_RS10570;Name=D1109_RS10570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10570;old_locus_tag=D1109_10605 NZ_CP031858.1 Protein Homology CDS 2184369 2185964 . + 0 ID=cds-WP_237611108.1;Parent=gene-D1109_RS10570;Dbxref=Genbank:WP_237611108.1;Name=WP_237611108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248978.1;locus_tag=D1109_RS10570;product=ABC transporter substrate-binding protein;protein_id=WP_237611108.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2186242 2187123 . - . ID=gene-D1109_RS10575;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=D1109_RS10575;old_locus_tag=D1109_10610 NZ_CP031858.1 Protein Homology CDS 2186242 2187123 . - 0 ID=cds-WP_005613911.1;Parent=gene-D1109_RS10575;Dbxref=Genbank:WP_005613911.1;Name=WP_005613911.1;Ontology_term=GO:0009086,GO:0004489;gbkey=CDS;gene=metF;go_function=methylenetetrahydrofolate reductase (NAD(P)H) activity|0004489||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005607973.1;locus_tag=D1109_RS10575;product=methylenetetrahydrofolate reductase;protein_id=WP_005613911.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2187343 2188500 . + . ID=gene-D1109_RS10580;Name=D1109_RS10580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10580;old_locus_tag=D1109_10615 NZ_CP031858.1 Protein Homology CDS 2187343 2188500 . + 0 ID=cds-WP_237611109.1;Parent=gene-D1109_RS10580;Dbxref=Genbank:WP_237611109.1;Name=WP_237611109.1;Ontology_term=GO:0009086,GO:0003871;gbkey=CDS;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005607970.1;locus_tag=D1109_RS10580;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_237611109.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2188562 2190160 . - . ID=gene-D1109_RS10585;Name=D1109_RS10585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10585;old_locus_tag=D1109_10620 NZ_CP031858.1 Protein Homology CDS 2188562 2190160 . - 0 ID=cds-WP_237611110.1;Parent=gene-D1109_RS10585;Dbxref=Genbank:WP_237611110.1;Name=WP_237611110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597352.1;locus_tag=D1109_RS10585;product=FAD-binding protein;protein_id=WP_237611110.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2190212 2191018 . - . ID=gene-D1109_RS10590;Name=D1109_RS10590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10590;old_locus_tag=D1109_10625 NZ_CP031858.1 Protein Homology CDS 2190212 2191018 . - 0 ID=cds-WP_005615163.1;Parent=gene-D1109_RS10590;Dbxref=Genbank:WP_005615163.1;Name=WP_005615163.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005623096.1;locus_tag=D1109_RS10590;product=ATP-binding cassette domain-containing protein;protein_id=WP_005615163.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2191022 2192995 . - . ID=gene-D1109_RS10595;Name=D1109_RS10595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10595;old_locus_tag=D1109_10630 NZ_CP031858.1 Protein Homology CDS 2191022 2192995 . - 0 ID=cds-WP_237611111.1;Parent=gene-D1109_RS10595;Dbxref=Genbank:WP_237611111.1;Name=WP_237611111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005615161.1;locus_tag=D1109_RS10595;product=dipeptide/oligopeptide/nickel ABC transporter permease/ATP-binding protein;protein_id=WP_237611111.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2192995 2193948 . - . ID=gene-D1109_RS10600;Name=D1109_RS10600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10600;old_locus_tag=D1109_10635 NZ_CP031858.1 Protein Homology CDS 2192995 2193948 . - 0 ID=cds-WP_237611112.1;Parent=gene-D1109_RS10600;Dbxref=Genbank:WP_237611112.1;Name=WP_237611112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651869.1;locus_tag=D1109_RS10600;product=ABC transporter permease;protein_id=WP_237611112.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2194047 2195621 . - . ID=gene-D1109_RS10605;Name=D1109_RS10605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10605;old_locus_tag=D1109_10640 NZ_CP031858.1 Protein Homology CDS 2194047 2195621 . - 0 ID=cds-WP_039709121.1;Parent=gene-D1109_RS10605;Dbxref=Genbank:WP_039709121.1;Name=WP_039709121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012262992.1;locus_tag=D1109_RS10605;product=ABC transporter substrate-binding protein;protein_id=WP_039709121.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2195884 2197041 . + . ID=gene-D1109_RS10610;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=D1109_RS10610;old_locus_tag=D1109_10645 NZ_CP031858.1 Protein Homology CDS 2195884 2197041 . + 0 ID=cds-WP_237611113.1;Parent=gene-D1109_RS10610;Dbxref=Genbank:WP_237611113.1;Name=WP_237611113.1;Ontology_term=GO:0006779,GO:0051989;gbkey=CDS;gene=hemW;go_function=coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604493.1;locus_tag=D1109_RS10610;product=radical SAM family heme chaperone HemW;protein_id=WP_237611113.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2197116 2197586 . + . ID=gene-D1109_RS10615;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=D1109_RS10615;old_locus_tag=D1109_10650 NZ_CP031858.1 Protein Homology CDS 2197116 2197586 . + 0 ID=cds-WP_005597335.1;Parent=gene-D1109_RS10615;Dbxref=Genbank:WP_005597335.1;Name=WP_005597335.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875410.1;locus_tag=D1109_RS10615;product=thioredoxin-dependent thiol peroxidase;protein_id=WP_005597335.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2197586 2198134 . + . ID=gene-D1109_RS10620;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=D1109_RS10620;old_locus_tag=D1109_10655 NZ_CP031858.1 Protein Homology CDS 2197586 2198134 . + 0 ID=cds-WP_100068944.1;Parent=gene-D1109_RS10620;Dbxref=Genbank:WP_100068944.1;Name=WP_100068944.1;Ontology_term=GO:0005975,GO:0016791;gbkey=CDS;gene=gmhB;go_function=phosphatase activity|0016791||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248298.1;locus_tag=D1109_RS10620;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=WP_100068944.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2198147 2198986 . + . ID=gene-D1109_RS10625;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=D1109_RS10625;old_locus_tag=D1109_10660 NZ_CP031858.1 Protein Homology CDS 2198147 2198986 . + 0 ID=cds-WP_005597325.1;Parent=gene-D1109_RS10625;Dbxref=Genbank:WP_005597325.1;Name=WP_005597325.1;Note=Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;Ontology_term=GO:0008616,GO:0033739,GO:0043867;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA,7-cyano-7-deazaguanine tRNA-ribosyltransferase activity|0043867||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005623076.1;locus_tag=D1109_RS10625;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=WP_005597325.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2199032 2199763 . - . ID=gene-D1109_RS10630;Name=trmJ;gbkey=Gene;gene=trmJ;gene_biotype=protein_coding;locus_tag=D1109_RS10630;old_locus_tag=D1109_10665 NZ_CP031858.1 Protein Homology CDS 2199032 2199763 . - 0 ID=cds-WP_215577617.1;Parent=gene-D1109_RS10630;Dbxref=Genbank:WP_215577617.1;Name=WP_215577617.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=trmJ;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005610136.1;locus_tag=D1109_RS10630;product=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;protein_id=WP_215577617.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2199968 2201506 . + . ID=gene-D1109_RS10635;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=D1109_RS10635;old_locus_tag=D1109_10670 NZ_CP031858.1 Protein Homology CDS 2199968 2201506 . + 0 ID=cds-WP_005601151.1;Parent=gene-D1109_RS10635;Dbxref=Genbank:WP_005601151.1;Name=WP_005601151.1;Ontology_term=GO:0008750;gbkey=CDS;gene=pntA;go_function=NAD(P)+ transhydrogenase (AB-specific) activity|0008750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007525314.1;locus_tag=D1109_RS10635;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;protein_id=WP_005601151.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2201517 2202965 . + . ID=gene-D1109_RS10640;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=D1109_RS10640;old_locus_tag=D1109_10675 NZ_CP031858.1 Protein Homology CDS 2201517 2202965 . + 0 ID=cds-WP_005597319.1;Parent=gene-D1109_RS10640;Dbxref=Genbank:WP_005597319.1;Name=WP_005597319.1;Ontology_term=GO:0008750,GO:0050661,GO:0016021;gbkey=CDS;gene=pntB;go_component=integral component of membrane|0016021||IEA;go_function=NAD(P)+ transhydrogenase (AB-specific) activity|0008750||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597319.1;locus_tag=D1109_RS10640;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;protein_id=WP_005597319.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2203043 2204437 . - . ID=gene-D1109_RS10645;Name=D1109_RS10645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10645;old_locus_tag=D1109_10680 NZ_CP031858.1 Protein Homology CDS 2203043 2204437 . - 0 ID=cds-WP_237593608.1;Parent=gene-D1109_RS10645;Dbxref=Genbank:WP_237593608.1;Name=WP_237593608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604476.1;locus_tag=D1109_RS10645;product=TolC family protein;protein_id=WP_237593608.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2204454 2205578 . - . ID=gene-D1109_RS10650;Name=D1109_RS10650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10650;old_locus_tag=D1109_10685 NZ_CP031858.1 Protein Homology CDS 2204454 2205578 . - 0 ID=cds-WP_237611114.1;Parent=gene-D1109_RS10650;Dbxref=Genbank:WP_237611114.1;Name=WP_237611114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651879.1;locus_tag=D1109_RS10650;product=ABC transporter permease;protein_id=WP_237611114.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2205580 2208321 . - . ID=gene-D1109_RS10655;Name=rbbA;gbkey=Gene;gene=rbbA;gene_biotype=protein_coding;locus_tag=D1109_RS10655;old_locus_tag=D1109_10690 NZ_CP031858.1 Protein Homology CDS 2205580 2208321 . - 0 ID=cds-WP_237611115.1;Parent=gene-D1109_RS10655;Dbxref=Genbank:WP_237611115.1;Name=WP_237611115.1;Ontology_term=GO:0055085,GO:0005524,GO:0042626,GO:0016021,GO:0043190;gbkey=CDS;gene=rbbA;go_component=integral component of membrane|0016021||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005607931.1;locus_tag=D1109_RS10655;product=ribosome-associated ATPase/putative transporter RbbA;protein_id=WP_237611115.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2208325 2209386 . - . ID=gene-D1109_RS10660;Name=D1109_RS10660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10660;old_locus_tag=D1109_10695 NZ_CP031858.1 Protein Homology CDS 2208325 2209386 . - 0 ID=cds-WP_005601141.1;Parent=gene-D1109_RS10660;Dbxref=Genbank:WP_005601141.1;Name=WP_005601141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597313.1;locus_tag=D1109_RS10660;product=HlyD family efflux transporter periplasmic adaptor subunit;protein_id=WP_005601141.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2209527 2210081 . + . ID=gene-D1109_RS10665;Name=D1109_RS10665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10665;old_locus_tag=D1109_10700 NZ_CP031858.1 Protein Homology CDS 2209527 2210081 . + 0 ID=cds-WP_005601137.1;Parent=gene-D1109_RS10665;Dbxref=Genbank:WP_005601137.1;Name=WP_005601137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597312.1;locus_tag=D1109_RS10665;product=TetR/AcrR family transcriptional regulator;protein_id=WP_005601137.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2210150 2210734 . - . ID=gene-D1109_RS10670;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=D1109_RS10670;old_locus_tag=D1109_10705 NZ_CP031858.1 Protein Homology CDS 2210150 2210734 . - 0 ID=cds-WP_005597311.1;Parent=gene-D1109_RS10670;Dbxref=Genbank:WP_005597311.1;Name=WP_005597311.1;Ontology_term=GO:0009394,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=2'-deoxyribonucleotide metabolic process|0009394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651883.1;locus_tag=D1109_RS10670;product=dCTP deaminase;protein_id=WP_005597311.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2210743 2211396 . - . ID=gene-D1109_RS10675;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=D1109_RS10675;old_locus_tag=D1109_10710 NZ_CP031858.1 Protein Homology CDS 2210743 2211396 . - 0 ID=cds-WP_005597310.1;Parent=gene-D1109_RS10675;Dbxref=Genbank:WP_005597310.1;Name=WP_005597310.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005601135.1;locus_tag=D1109_RS10675;product=uridine kinase;protein_id=WP_005597310.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2211514 2212149 . + . ID=gene-D1109_RS10680;Name=D1109_RS10680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10680;old_locus_tag=D1109_10715 NZ_CP031858.1 Protein Homology CDS 2211514 2212149 . + 0 ID=cds-WP_237611116.1;Parent=gene-D1109_RS10680;Dbxref=Genbank:WP_237611116.1;Name=WP_237611116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005620726.1;locus_tag=D1109_RS10680;product=LysE/ArgO family amino acid transporter;protein_id=WP_237611116.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2212233 2212916 . - . ID=gene-D1109_RS10685;Name=D1109_RS10685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10685;old_locus_tag=D1109_10720 NZ_CP031858.1 Protein Homology CDS 2212233 2212916 . - 0 ID=cds-WP_005597307.1;Parent=gene-D1109_RS10685;Dbxref=Genbank:WP_005597307.1;Name=WP_005597307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011201466.1;locus_tag=D1109_RS10685;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_005597307.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2213086 2214294 . + . ID=gene-D1109_RS10690;Name=envC;gbkey=Gene;gene=envC;gene_biotype=protein_coding;locus_tag=D1109_RS10690;old_locus_tag=D1109_10725 NZ_CP031858.1 Protein Homology CDS 2213086 2214294 . + 0 ID=cds-WP_005617342.1;Parent=gene-D1109_RS10690;Dbxref=Genbank:WP_005617342.1;Name=WP_005617342.1;gbkey=CDS;gene=envC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005607926.1;locus_tag=D1109_RS10690;product=murein hydrolase activator EnvC;protein_id=WP_005617342.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2214294 2215142 . + . ID=gene-D1109_RS10695;Name=D1109_RS10695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10695;old_locus_tag=D1109_10730 NZ_CP031858.1 Protein Homology CDS 2214294 2215142 . + 0 ID=cds-WP_005601127.1;Parent=gene-D1109_RS10695;Dbxref=Genbank:WP_005601127.1;Name=WP_005601127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597304.1;locus_tag=D1109_RS10695;product=divergent polysaccharide deacetylase family protein;protein_id=WP_005601127.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2215158 2216984 . + . ID=gene-D1109_RS10700;Name=D1109_RS10700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10700;old_locus_tag=D1109_10735 NZ_CP031858.1 Protein Homology CDS 2215158 2216984 . + 0 ID=cds-WP_237611117.1;Parent=gene-D1109_RS10700;Dbxref=Genbank:WP_237611117.1;Name=WP_237611117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012262982.1;locus_tag=D1109_RS10700;product=autotransporter assembly complex protein TamA;protein_id=WP_237611117.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2217045 2221004 . + . ID=gene-D1109_RS10705;Name=D1109_RS10705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10705;old_locus_tag=D1109_10740 NZ_CP031858.1 Protein Homology CDS 2217045 2221004 . + 0 ID=cds-WP_237611118.1;Parent=gene-D1109_RS10705;Dbxref=Genbank:WP_237611118.1;Name=WP_237611118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005613905.1;locus_tag=D1109_RS10705;product=translocation/assembly module TamB;protein_id=WP_237611118.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2221164 2222906 . + . ID=gene-D1109_RS10710;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=D1109_RS10710;old_locus_tag=D1109_10745 NZ_CP031858.1 Protein Homology CDS 2221164 2222906 . + 0 ID=cds-WP_005615140.1;Parent=gene-D1109_RS10710;Dbxref=Genbank:WP_005615140.1;Name=WP_005615140.1;Ontology_term=GO:0042883,GO:0005524,GO:0140359,GO:0016021;gbkey=CDS;gene=cydD;go_component=integral component of membrane|0016021||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=cysteine transport|0042883||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597296.1;locus_tag=D1109_RS10710;product=cysteine/glutathione ABC transporter permease/ATP-binding protein CydD;protein_id=WP_005615140.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2222917 2224584 . + . ID=gene-D1109_RS10715;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=D1109_RS10715;old_locus_tag=D1109_10750 NZ_CP031858.1 Protein Homology CDS 2222917 2224584 . + 0 ID=cds-WP_237611119.1;Parent=gene-D1109_RS10715;Dbxref=Genbank:WP_237611119.1;Name=WP_237611119.1;Ontology_term=GO:0034775,GO:0045454,GO:0005524,GO:0042626,GO:0140359,GO:0016021;gbkey=CDS;gene=cydC;go_component=integral component of membrane|0016021||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=glutathione transmembrane transport|0034775||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875381.1;locus_tag=D1109_RS10715;product=cysteine/glutathione ABC transporter ATP-binding protein/permease CydC;protein_id=WP_237611119.1;transl_table=11 NZ_CP031858.1 RefSeq pseudogene 2224749 2225381 . + . ID=gene-D1109_RS10720;Name=hflD;gbkey=Gene;gene=hflD;gene_biotype=pseudogene;locus_tag=D1109_RS10720;old_locus_tag=D1109_10755;pseudo=true NZ_CP031858.1 Protein Homology CDS 2224749 2225381 . + 0 ID=cds-D1109_RS10720;Parent=gene-D1109_RS10720;Note=internal stop;gbkey=CDS;gene=hflD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005601117.1;locus_tag=D1109_RS10720;product=high frequency lysogenization protein HflD;pseudo=true;transl_table=11 NZ_CP031858.1 RefSeq gene 2225438 2226805 . + . ID=gene-D1109_RS10725;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=D1109_RS10725;old_locus_tag=D1109_10760 NZ_CP031858.1 Protein Homology CDS 2225438 2226805 . + 0 ID=cds-WP_005615138.1;Parent=gene-D1109_RS10725;Dbxref=Genbank:WP_005615138.1;Name=WP_005615138.1;Ontology_term=GO:0006188,GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=IMP biosynthetic process|0006188||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651895.1;locus_tag=D1109_RS10725;product=adenylosuccinate lyase;protein_id=WP_005615138.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2226873 2227634 . + . ID=gene-D1109_RS10730;Name=D1109_RS10730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10730;old_locus_tag=D1109_10765 NZ_CP031858.1 Protein Homology CDS 2226873 2227634 . + 0 ID=cds-WP_005597287.1;Parent=gene-D1109_RS10730;Dbxref=Genbank:WP_005597287.1;Name=WP_005597287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012262976.1;locus_tag=D1109_RS10730;product=DeoR/GlpR family transcriptional regulator;protein_id=WP_005597287.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2227634 2228515 . + . ID=gene-D1109_RS10735;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=D1109_RS10735;old_locus_tag=D1109_10770 NZ_CP031858.1 Protein Homology CDS 2227634 2228515 . + 0 ID=cds-WP_005601109.1;Parent=gene-D1109_RS10735;Dbxref=Genbank:WP_005601109.1;Name=WP_005601109.1;Ontology_term=GO:0006744,GO:0008412;gbkey=CDS;gene=ubiA;go_function=4-hydroxybenzoate octaprenyltransferase activity|0008412||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991685.1;locus_tag=D1109_RS10735;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_005601109.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2228728 2231160 . + . ID=gene-D1109_RS10740;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=D1109_RS10740;old_locus_tag=D1109_10775 NZ_CP031858.1 Protein Homology CDS 2228728 2231160 . + 0 ID=cds-WP_005597283.1;Parent=gene-D1109_RS10740;Dbxref=Genbank:WP_005597283.1;Name=WP_005597283.1;Ontology_term=GO:0006265,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrB;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651898.1;locus_tag=D1109_RS10740;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_005597283.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2231260 2231862 . - . ID=gene-D1109_RS10745;Name=D1109_RS10745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10745;old_locus_tag=D1109_10780 NZ_CP031858.1 Protein Homology CDS 2231260 2231862 . - 0 ID=cds-WP_005597281.1;Parent=gene-D1109_RS10745;Dbxref=Genbank:WP_005597281.1;Name=WP_005597281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005617335.1;locus_tag=D1109_RS10745;product=DedA family protein;protein_id=WP_005597281.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2231885 2232895 . - . ID=gene-D1109_RS10750;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=D1109_RS10750;old_locus_tag=D1109_10785 NZ_CP031858.1 Protein Homology CDS 2231885 2232895 . - 0 ID=cds-WP_005612138.1;Parent=gene-D1109_RS10750;Dbxref=Genbank:WP_005612138.1;Name=WP_005612138.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005601105.1;locus_tag=D1109_RS10750;product=HTH-type transcriptional repressor PurR;protein_id=WP_005612138.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2233094 2233507 . + . ID=gene-D1109_RS10755;Name=uraH;gbkey=Gene;gene=uraH;gene_biotype=protein_coding;locus_tag=D1109_RS10755;old_locus_tag=D1109_10790 NZ_CP031858.1 Protein Homology CDS 2233094 2233507 . + 0 ID=cds-WP_005601104.1;Parent=gene-D1109_RS10755;Dbxref=Genbank:WP_005601104.1;Name=WP_005601104.1;Ontology_term=GO:0019628;gbkey=CDS;gene=uraH;go_process=urate catabolic process|0019628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005539234.1;locus_tag=D1109_RS10755;product=hydroxyisourate hydrolase;protein_id=WP_005601104.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2233548 2233633 . - . ID=gene-D1109_RS10760;Name=D1109_RS10760;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS10760;old_locus_tag=D1109_10795 NZ_CP031858.1 tRNAscan-SE tRNA 2233548 2233633 . - . ID=rna-D1109_RS10760;Parent=gene-D1109_RS10760;anticodon=(pos:complement(2233597..2233599));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS10760;product=tRNA-Leu NZ_CP031858.1 tRNAscan-SE exon 2233548 2233633 . - . ID=exon-D1109_RS10760-1;Parent=rna-D1109_RS10760;anticodon=(pos:complement(2233597..2233599));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS10760;product=tRNA-Leu NZ_CP031858.1 RefSeq gene 2233883 2235436 . - . ID=gene-D1109_RS10765;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=D1109_RS10765;old_locus_tag=D1109_10800 NZ_CP031858.1 Protein Homology CDS 2233883 2235436 . - 0 ID=cds-WP_043880776.1;Parent=gene-D1109_RS10765;Dbxref=Genbank:WP_043880776.1;Name=WP_043880776.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005607769.1;locus_tag=D1109_RS10765;product=exodeoxyribonuclease VII large subunit;protein_id=WP_043880776.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2235471 2235547 . - . ID=gene-D1109_RS10770;Name=D1109_RS10770;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS10770;old_locus_tag=D1109_10805 NZ_CP031858.1 tRNAscan-SE tRNA 2235471 2235547 . - . ID=rna-D1109_RS10770;Parent=gene-D1109_RS10770;anticodon=(pos:complement(2235511..2235513));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS10770;product=tRNA-Met NZ_CP031858.1 tRNAscan-SE exon 2235471 2235547 . - . ID=exon-D1109_RS10770-1;Parent=rna-D1109_RS10770;anticodon=(pos:complement(2235511..2235513));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS10770;product=tRNA-Met NZ_CP031858.1 RefSeq gene 2235752 2236849 . + . ID=gene-D1109_RS10775;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=D1109_RS10775;old_locus_tag=D1109_10810 NZ_CP031858.1 Protein Homology CDS 2235752 2236849 . + 0 ID=cds-WP_005597277.1;Parent=gene-D1109_RS10775;Dbxref=Genbank:WP_005597277.1;Name=WP_005597277.1;Ontology_term=GO:0009254,GO:0004553,GO:0019867;gbkey=CDS;gene=mltA;go_component=outer membrane|0019867||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597277.1;locus_tag=D1109_RS10775;product=murein transglycosylase A;protein_id=WP_005597277.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2236916 2237251 . - . ID=gene-D1109_RS10780;Name=D1109_RS10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10780;old_locus_tag=D1109_10815 NZ_CP031858.1 Protein Homology CDS 2236916 2237251 . - 0 ID=cds-WP_009875481.1;Parent=gene-D1109_RS10780;Dbxref=Genbank:WP_009875481.1;Name=WP_009875481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005620777.1;locus_tag=D1109_RS10780;product=hypothetical protein;protein_id=WP_009875481.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2237397 2238359 . - . ID=gene-D1109_RS10785;Name=cmoB;gbkey=Gene;gene=cmoB;gene_biotype=protein_coding;locus_tag=D1109_RS10785;old_locus_tag=D1109_10820 NZ_CP031858.1 Protein Homology CDS 2237397 2238359 . - 0 ID=cds-WP_005601096.1;Parent=gene-D1109_RS10785;Dbxref=Genbank:WP_005601096.1;Name=WP_005601096.1;Ontology_term=GO:0002098,GO:0016765;gbkey=CDS;gene=cmoB;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005707797.1;locus_tag=D1109_RS10785;product=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;protein_id=WP_005601096.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2238569 2240416 . + . ID=gene-D1109_RS10790;Name=D1109_RS10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10790;old_locus_tag=D1109_10825 NZ_CP031858.1 Protein Homology CDS 2238569 2240416 . + 0 ID=cds-WP_012262973.1;Parent=gene-D1109_RS10790;Dbxref=Genbank:WP_012262973.1;Name=WP_012262973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991660.1;locus_tag=D1109_RS10790;product=site-specific DNA-methyltransferase;protein_id=WP_012262973.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2240555 2243167 . + . ID=gene-D1109_RS10795;Name=D1109_RS10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10795;old_locus_tag=D1109_10830 NZ_CP031858.1 Protein Homology CDS 2240555 2243167 . + 0 ID=cds-WP_237611120.1;Parent=gene-D1109_RS10795;Dbxref=Genbank:WP_237611120.1;Name=WP_237611120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005612131.1;locus_tag=D1109_RS10795;product=DEAD/DEAH box helicase family protein;protein_id=WP_237611120.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2243200 2244963 . - . ID=gene-D1109_RS10800;Name=D1109_RS10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10800;old_locus_tag=D1109_10835 NZ_CP031858.1 Protein Homology CDS 2243200 2244963 . - 0 ID=cds-WP_005601083.1;Parent=gene-D1109_RS10800;Dbxref=Genbank:WP_005601083.1;Name=WP_005601083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875484.1;locus_tag=D1109_RS10800;product=30S ribosomal protein S12 methylthiotransferase accessory protein YcaO;protein_id=WP_005601083.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2245193 2246668 . + . ID=gene-D1109_RS10805;Name=rng;gbkey=Gene;gene=rng;gene_biotype=protein_coding;locus_tag=D1109_RS10805;old_locus_tag=D1109_10840 NZ_CP031858.1 Protein Homology CDS 2245193 2246668 . + 0 ID=cds-WP_039709105.1;Parent=gene-D1109_RS10805;Dbxref=Genbank:WP_039709105.1;Name=WP_039709105.1;Ontology_term=GO:0006396,GO:0004540;gbkey=CDS;gene=rng;go_function=ribonuclease activity|0004540||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005610087.1;locus_tag=D1109_RS10805;product=ribonuclease G;protein_id=WP_039709105.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2246803 2248305 . + . ID=gene-D1109_RS10810;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=D1109_RS10810;old_locus_tag=D1109_10845 NZ_CP031858.1 Protein Homology CDS 2246803 2248305 . + 0 ID=cds-WP_005601076.1;Parent=gene-D1109_RS10810;Dbxref=Genbank:WP_005601076.1;Name=WP_005601076.1;Ontology_term=GO:0006430,GO:0004824;gbkey=CDS;gene=lysS;go_function=lysine-tRNA ligase activity|0004824||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012054447.1;locus_tag=D1109_RS10810;product=lysine--tRNA ligase;protein_id=WP_005601076.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2248406 2248750 . + . ID=gene-D1109_RS10815;Name=D1109_RS10815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10815;old_locus_tag=D1109_10850 NZ_CP031858.1 Protein Homology CDS 2248406 2248750 . + 0 ID=cds-WP_005597263.1;Parent=gene-D1109_RS10815;Dbxref=Genbank:WP_005597263.1;Name=WP_005597263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991655.1;locus_tag=D1109_RS10815;product=DMT family protein;protein_id=WP_005597263.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2248834 2249727 . - . ID=gene-D1109_RS10820;Name=ispA;gbkey=Gene;gene=ispA;gene_biotype=protein_coding;locus_tag=D1109_RS10820;old_locus_tag=D1109_10855 NZ_CP031858.1 Protein Homology CDS 2248834 2249727 . - 0 ID=cds-WP_005597262.1;Parent=gene-D1109_RS10820;Dbxref=Genbank:WP_005597262.1;Name=WP_005597262.1;gbkey=CDS;gene=ispA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005617324.1;locus_tag=D1109_RS10820;product=(2E%2C6E)-farnesyl diphosphate synthase;protein_id=WP_005597262.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2249736 2249960 . - . ID=gene-D1109_RS10825;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=D1109_RS10825;old_locus_tag=D1109_10860 NZ_CP031858.1 Protein Homology CDS 2249736 2249960 . - 0 ID=cds-WP_005597261.1;Parent=gene-D1109_RS10825;Dbxref=Genbank:WP_005597261.1;Name=WP_005597261.1;gbkey=CDS;gene=xseB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597261.1;locus_tag=D1109_RS10825;product=exodeoxyribonuclease VII small subunit;protein_id=WP_005597261.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2250105 2250893 . + . ID=gene-D1109_RS10830;Name=D1109_RS10830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10830;old_locus_tag=D1109_10865 NZ_CP031858.1 Protein Homology CDS 2250105 2250893 . + 0 ID=cds-WP_005597260.1;Parent=gene-D1109_RS10830;Dbxref=Genbank:WP_005597260.1;Name=WP_005597260.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991652.1;locus_tag=D1109_RS10830;product=MOSC domain-containing protein;protein_id=WP_005597260.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2250931 2252907 . + . ID=gene-D1109_RS10835;Name=D1109_RS10835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10835;old_locus_tag=D1109_10870 NZ_CP031858.1 Protein Homology CDS 2250931 2252907 . + 0 ID=cds-WP_005597259.1;Parent=gene-D1109_RS10835;Dbxref=Genbank:WP_005597259.1;Name=WP_005597259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011848470.1;locus_tag=D1109_RS10835;product=LTA synthase family protein;protein_id=WP_005597259.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2253067 2253164 . - . ID=gene-D1109_RS10840;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=D1109_RS10840;old_locus_tag=D1109_10875 NZ_CP031858.1 cmsearch SRP_RNA 2253067 2253164 . - . ID=rna-D1109_RS10840;Parent=gene-D1109_RS10840;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D1109_RS10840;product=signal recognition particle sRNA small type NZ_CP031858.1 cmsearch exon 2253067 2253164 . - . ID=exon-D1109_RS10840-1;Parent=rna-D1109_RS10840;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D1109_RS10840;product=signal recognition particle sRNA small type NZ_CP031858.1 RefSeq gene 2253576 2254052 . - . ID=gene-D1109_RS10845;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=D1109_RS10845;old_locus_tag=D1109_10880 NZ_CP031858.1 Protein Homology CDS 2253576 2254052 . - 0 ID=cds-WP_005604392.1;Parent=gene-D1109_RS10845;Dbxref=Genbank:WP_005604392.1;Name=WP_005604392.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005687916.1;locus_tag=D1109_RS10845;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_005604392.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2254049 2254735 . - . ID=gene-D1109_RS10850;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=D1109_RS10850;old_locus_tag=D1109_10885 NZ_CP031858.1 Protein Homology CDS 2254049 2254735 . - 0 ID=cds-WP_005597257.1;Parent=gene-D1109_RS10850;Dbxref=Genbank:WP_005597257.1;Name=WP_005597257.1;Ontology_term=GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604389.1;locus_tag=D1109_RS10850;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_005597257.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2254751 2255029 . - . ID=gene-D1109_RS10855;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=D1109_RS10855;old_locus_tag=D1109_10890 NZ_CP031858.1 Protein Homology CDS 2254751 2255029 . - 0 ID=cds-WP_005597256.1;Parent=gene-D1109_RS10855;Dbxref=Genbank:WP_005597256.1;Name=WP_005597256.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597256.1;locus_tag=D1109_RS10855;product=cell division protein FtsB;protein_id=WP_005597256.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2255302 2256912 . + . ID=gene-D1109_RS10860;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=D1109_RS10860;old_locus_tag=D1109_10895 NZ_CP031858.1 Protein Homology CDS 2255302 2256912 . + 0 ID=cds-WP_005601066.1;Parent=gene-D1109_RS10860;Dbxref=Genbank:WP_005601066.1;Name=WP_005601066.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991341.1;locus_tag=D1109_RS10860;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WP_005601066.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2257122 2257910 . - . ID=gene-D1109_RS10865;Name=D1109_RS10865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10865;old_locus_tag=D1109_10905 NZ_CP031858.1 Protein Homology CDS 2257122 2257910 . - 0 ID=cds-WP_237593842.1;Parent=gene-D1109_RS10865;Dbxref=Genbank:WP_237593842.1;Name=WP_237593842.1;Ontology_term=GO:0006313;gbkey=CDS;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618583.1;locus_tag=D1109_RS10865;product=transposase;protein_id=WP_237593842.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2258225 2258809 . - . ID=gene-D1109_RS10870;Name=lpcA;gbkey=Gene;gene=lpcA;gene_biotype=protein_coding;locus_tag=D1109_RS10870;old_locus_tag=D1109_10915 NZ_CP031858.1 Protein Homology CDS 2258225 2258809 . - 0 ID=cds-WP_005597254.1;Parent=gene-D1109_RS10870;Dbxref=Genbank:WP_005597254.1;Name=WP_005597254.1;Ontology_term=GO:1901135,GO:0008968;gbkey=CDS;gene=lpcA;go_function=D-sedoheptulose 7-phosphate isomerase activity|0008968||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013527809.1;locus_tag=D1109_RS10870;product=D-sedoheptulose 7-phosphate isomerase;protein_id=WP_005597254.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2259014 2260162 . + . ID=gene-D1109_RS10875;Name=D1109_RS10875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10875;old_locus_tag=D1109_10920 NZ_CP031858.1 Protein Homology CDS 2259014 2260162 . + 0 ID=cds-WP_005617319.1;Parent=gene-D1109_RS10875;Dbxref=Genbank:WP_005617319.1;Name=WP_005617319.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005615123.1;locus_tag=D1109_RS10875;product=sigma 54-interacting transcriptional regulator;protein_id=WP_005617319.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2260172 2261869 . + . ID=gene-D1109_RS10880;Name=D1109_RS10880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10880;old_locus_tag=D1109_10925 NZ_CP031858.1 Protein Homology CDS 2260172 2261869 . + 0 ID=cds-WP_005597244.1;Parent=gene-D1109_RS10880;Dbxref=Genbank:WP_005597244.1;Name=WP_005597244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017357662.1;locus_tag=D1109_RS10880;product=ABC transporter substrate-binding protein;protein_id=WP_005597244.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2261869 2262831 . + . ID=gene-D1109_RS10885;Name=D1109_RS10885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10885;old_locus_tag=D1109_10930 NZ_CP031858.1 Protein Homology CDS 2261869 2262831 . + 0 ID=cds-WP_005597242.1;Parent=gene-D1109_RS10885;Dbxref=Genbank:WP_005597242.1;Name=WP_005597242.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005617316.1;locus_tag=D1109_RS10885;product=ABC transporter permease subunit;protein_id=WP_005597242.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2262821 2263708 . + . ID=gene-D1109_RS10890;Name=D1109_RS10890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10890;old_locus_tag=D1109_10935 NZ_CP031858.1 Protein Homology CDS 2262821 2263708 . + 0 ID=cds-WP_005597240.1;Parent=gene-D1109_RS10890;Dbxref=Genbank:WP_005597240.1;Name=WP_005597240.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597240.1;locus_tag=D1109_RS10890;product=ABC transporter permease subunit;protein_id=WP_005597240.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2263722 2264759 . + . ID=gene-D1109_RS10895;Name=D1109_RS10895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10895;old_locus_tag=D1109_10940 NZ_CP031858.1 Protein Homology CDS 2263722 2264759 . + 0 ID=cds-WP_005612122.1;Parent=gene-D1109_RS10895;Dbxref=Genbank:WP_005612122.1;Name=WP_005612122.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604383.1;locus_tag=D1109_RS10895;product=ATP-binding cassette domain-containing protein;protein_id=WP_005612122.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2264843 2265610 . + . ID=gene-D1109_RS10900;Name=D1109_RS10900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10900;old_locus_tag=D1109_10945 NZ_CP031858.1 Protein Homology CDS 2264843 2265610 . + 0 ID=cds-WP_005597234.1;Parent=gene-D1109_RS10900;Dbxref=Genbank:WP_005597234.1;Name=WP_005597234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597234.1;locus_tag=D1109_RS10900;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_005597234.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2265653 2267017 . - . ID=gene-D1109_RS10905;Name=D1109_RS10905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10905;old_locus_tag=D1109_10950 NZ_CP031858.1 Protein Homology CDS 2265653 2267017 . - 0 ID=cds-WP_237611121.1;Parent=gene-D1109_RS10905;Dbxref=Genbank:WP_237611121.1;Name=WP_237611121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005601059.1;locus_tag=D1109_RS10905;product=MFS transporter;protein_id=WP_237611121.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2267555 2268529 . - . ID=gene-D1109_RS10910;Name=D1109_RS10910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10910;old_locus_tag=D1109_10955 NZ_CP031858.1 Protein Homology CDS 2267555 2268529 . - 0 ID=cds-WP_237611122.1;Parent=gene-D1109_RS10910;Dbxref=Genbank:WP_237611122.1;Name=WP_237611122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991648.1;locus_tag=D1109_RS10910;product=nitronate monooxygenase;protein_id=WP_237611122.1;transl_table=11 NZ_CP031858.1 RefSeq pseudogene 2268634 2269514 . + . ID=gene-D1109_RS10915;Name=D1109_RS10915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D1109_RS10915;old_locus_tag=D1109_10960;pseudo=true NZ_CP031858.1 Protein Homology CDS 2268634 2269514 . + 0 ID=cds-D1109_RS10915;Parent=gene-D1109_RS10915;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991647.1;locus_tag=D1109_RS10915;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP031858.1 RefSeq gene 2269822 2271114 . + . ID=gene-D1109_RS10920;Name=D1109_RS10920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10920;old_locus_tag=D1109_10965 NZ_CP031858.1 Protein Homology CDS 2269822 2271114 . + 0 ID=cds-WP_237611123.1;Parent=gene-D1109_RS10920;Dbxref=Genbank:WP_237611123.1;Name=WP_237611123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874894.1;locus_tag=D1109_RS10920;product=ATP-binding protein;protein_id=WP_237611123.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2271215 2272303 . + . ID=gene-D1109_RS10925;Name=D1109_RS10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10925;old_locus_tag=D1109_10970 NZ_CP031858.1 Protein Homology CDS 2271215 2272303 . + 0 ID=cds-WP_005618943.1;Parent=gene-D1109_RS10925;Dbxref=Genbank:WP_005618943.1;Name=WP_005618943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618943.1;locus_tag=D1109_RS10925;product=hypothetical protein;protein_id=WP_005618943.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2272300 2272728 . + . ID=gene-D1109_RS10930;Name=D1109_RS10930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10930;old_locus_tag=D1109_10975 NZ_CP031858.1 Protein Homology CDS 2272300 2272728 . + 0 ID=cds-WP_005618945.1;Parent=gene-D1109_RS10930;Dbxref=Genbank:WP_005618945.1;Name=WP_005618945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618945.1;locus_tag=D1109_RS10930;product=DUF6521 family protein;protein_id=WP_005618945.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2272725 2273657 . + . ID=gene-D1109_RS10935;Name=D1109_RS10935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10935 NZ_CP031858.1 GeneMarkS-2+ CDS 2272725 2273657 . + 0 ID=cds-WP_237611124.1;Parent=gene-D1109_RS10935;Dbxref=Genbank:WP_237611124.1;Name=WP_237611124.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=D1109_RS10935;product=hypothetical protein;protein_id=WP_237611124.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2273614 2274714 . + . ID=gene-D1109_RS10940;Name=D1109_RS10940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10940 NZ_CP031858.1 Protein Homology CDS 2273614 2274714 . + 0 ID=cds-WP_237611125.1;Parent=gene-D1109_RS10940;Dbxref=Genbank:WP_237611125.1;Name=WP_237611125.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023946.2;locus_tag=D1109_RS10940;product=DUF3732 domain-containing protein;protein_id=WP_237611125.1;transl_table=11 NZ_CP031858.1 RefSeq pseudogene 2274878 2274979 . - . ID=gene-D1109_RS10945;Name=D1109_RS10945;end_range=2274979,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D1109_RS10945;old_locus_tag=D1109_10985;partial=true;pseudo=true NZ_CP031858.1 Protein Homology CDS 2274878 2274979 . - 0 ID=cds-D1109_RS10945;Parent=gene-D1109_RS10945;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2274979,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005631031.1;locus_tag=D1109_RS10945;partial=true;product=alcohol dehydrogenase;pseudo=true;transl_table=11 NZ_CP031858.1 RefSeq gene 2275038 2275856 . + . ID=gene-D1109_RS10950;Name=D1109_RS10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10950;old_locus_tag=D1109_10990 NZ_CP031858.1 Protein Homology CDS 2275038 2275856 . + 0 ID=cds-WP_005601047.1;Parent=gene-D1109_RS10950;Dbxref=Genbank:WP_005601047.1;Name=WP_005601047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012262961.1;locus_tag=D1109_RS10950;product=GIY-YIG nuclease family protein;protein_id=WP_005601047.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2276021 2276545 . - . ID=gene-D1109_RS10955;Name=D1109_RS10955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10955;old_locus_tag=D1109_10995 NZ_CP031858.1 Protein Homology CDS 2276021 2276545 . - 0 ID=cds-WP_005601045.1;Parent=gene-D1109_RS10955;Dbxref=Genbank:WP_005601045.1;Name=WP_005601045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000168322.1;locus_tag=D1109_RS10955;product=single-stranded DNA-binding protein;protein_id=WP_005601045.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2276696 2279524 . + . ID=gene-D1109_RS10960;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=D1109_RS10960;old_locus_tag=D1109_11000 NZ_CP031858.1 Protein Homology CDS 2276696 2279524 . + 0 ID=cds-WP_005601043.1;Parent=gene-D1109_RS10960;Dbxref=Genbank:WP_005601043.1;Name=WP_005601043.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005612043.1;locus_tag=D1109_RS10960;product=excinuclease ABC subunit UvrA;protein_id=WP_005601043.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2279663 2279875 . - . ID=gene-D1109_RS10965;Name=D1109_RS10965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10965;old_locus_tag=D1109_11005 NZ_CP031858.1 Protein Homology CDS 2279663 2279875 . - 0 ID=cds-WP_005597221.1;Parent=gene-D1109_RS10965;Dbxref=Genbank:WP_005597221.1;Name=WP_005597221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005615108.1;locus_tag=D1109_RS10965;product=hypothetical protein;protein_id=WP_005597221.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2279997 2281919 . + . ID=gene-D1109_RS10970;Name=D1109_RS10970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10970;old_locus_tag=D1109_11010 NZ_CP031858.1 Protein Homology CDS 2279997 2281919 . + 0 ID=cds-WP_237611126.1;Parent=gene-D1109_RS10970;Dbxref=Genbank:WP_237611126.1;Name=WP_237611126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005601041.1;locus_tag=D1109_RS10970;product=ATP-dependent DNA helicase;protein_id=WP_237611126.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2281986 2282345 . + . ID=gene-D1109_RS10975;Name=D1109_RS10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10975;old_locus_tag=D1109_11015 NZ_CP031858.1 Protein Homology CDS 2281986 2282345 . + 0 ID=cds-WP_005601040.1;Parent=gene-D1109_RS10975;Dbxref=Genbank:WP_005601040.1;Name=WP_005601040.1;Ontology_term=GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005601040.1;locus_tag=D1109_RS10975;product=CidA/LrgA family protein;protein_id=WP_005601040.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2282355 2283041 . + . ID=gene-D1109_RS10980;Name=D1109_RS10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS10980;old_locus_tag=D1109_11020 NZ_CP031858.1 Protein Homology CDS 2282355 2283041 . + 0 ID=cds-WP_005601038.1;Parent=gene-D1109_RS10980;Dbxref=Genbank:WP_005601038.1;Name=WP_005601038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597218.1;locus_tag=D1109_RS10980;product=CidB/LrgB family autolysis modulator;protein_id=WP_005601038.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2283146 2284894 . + . ID=gene-D1109_RS10985;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=D1109_RS10985;old_locus_tag=D1109_11025 NZ_CP031858.1 Protein Homology CDS 2283146 2284894 . + 0 ID=cds-WP_005615103.1;Parent=gene-D1109_RS10985;Dbxref=Genbank:WP_005615103.1;Name=WP_005615103.1;Ontology_term=GO:0055085,GO:0005524,GO:0034040,GO:0140359,GO:0016021;gbkey=CDS;gene=msbA;go_component=integral component of membrane|0016021||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled lipid transmembrane transporter activity|0034040||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012262957.1;locus_tag=D1109_RS10985;product=lipid A ABC transporter ATP-binding protein/permease MsbA;protein_id=WP_005615103.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2285023 2285655 . + . ID=gene-D1109_RS10990;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=D1109_RS10990;old_locus_tag=D1109_11030 NZ_CP031858.1 Protein Homology CDS 2285023 2285655 . + 0 ID=cds-WP_005597216.1;Parent=gene-D1109_RS10990;Dbxref=Genbank:WP_005597216.1;Name=WP_005597216.1;Ontology_term=GO:0009306,GO:0008320;gbkey=CDS;gene=lolB;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597216.1;locus_tag=D1109_RS10990;product=lipoprotein insertase outer membrane protein LolB;protein_id=WP_005597216.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2285665 2286522 . + . ID=gene-D1109_RS10995;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=D1109_RS10995;old_locus_tag=D1109_11035 NZ_CP031858.1 Protein Homology CDS 2285665 2286522 . + 0 ID=cds-WP_005612040.1;Parent=gene-D1109_RS10995;Dbxref=Genbank:WP_005612040.1;Name=WP_005612040.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604345.1;locus_tag=D1109_RS10995;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_005612040.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2286534 2287484 . + . ID=gene-D1109_RS11000;Name=D1109_RS11000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS11000;old_locus_tag=D1109_11040 NZ_CP031858.1 Protein Homology CDS 2286534 2287484 . + 0 ID=cds-WP_005597212.1;Parent=gene-D1109_RS11000;Dbxref=Genbank:WP_005597212.1;Name=WP_005597212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010945436.1;locus_tag=D1109_RS11000;product=ribose-phosphate pyrophosphokinase;protein_id=WP_005597212.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2287558 2288565 . + . ID=gene-D1109_RS11005;Name=pyrD;gbkey=Gene;gene=pyrD;gene_biotype=protein_coding;locus_tag=D1109_RS11005;old_locus_tag=D1109_11045 NZ_CP031858.1 Protein Homology CDS 2287558 2288565 . + 0 ID=cds-WP_237611127.1;Parent=gene-D1109_RS11005;Dbxref=Genbank:WP_237611127.1;Name=WP_237611127.1;Ontology_term=GO:0006222,GO:0004152,GO:0016020;gbkey=CDS;gene=pyrD;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=UMP biosynthetic process|0006222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017357663.1;locus_tag=D1109_RS11005;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WP_237611127.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2288920 2291574 . + . ID=gene-D1109_RS11010;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=D1109_RS11010;old_locus_tag=D1109_11050 NZ_CP031858.1 Protein Homology CDS 2288920 2291574 . + 0 ID=cds-WP_005597210.1;Parent=gene-D1109_RS11010;Dbxref=Genbank:WP_005597210.1;Name=WP_005597210.1;Ontology_term=GO:0006086,GO:0004738,GO:0045250;gbkey=CDS;gene=aceE;go_component=cytosolic pyruvate dehydrogenase complex|0045250||IEA;go_function=pyruvate dehydrogenase activity|0004738||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005628834.1;locus_tag=D1109_RS11010;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WP_005597210.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2291634 2293532 . + . ID=gene-D1109_RS11015;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=D1109_RS11015;old_locus_tag=D1109_11055 NZ_CP031858.1 Protein Homology CDS 2291634 2293532 . + 0 ID=cds-WP_237611128.1;Parent=gene-D1109_RS11015;Dbxref=Genbank:WP_237611128.1;Name=WP_237611128.1;Ontology_term=GO:0006096,GO:0004742,GO:0045254;gbkey=CDS;gene=aceF;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=dihydrolipoyllysine-residue acetyltransferase activity|0004742||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618949.1;locus_tag=D1109_RS11015;product=pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase;protein_id=WP_237611128.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2293628 2295052 . + . ID=gene-D1109_RS11020;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=D1109_RS11020;old_locus_tag=D1109_11060 NZ_CP031858.1 Protein Homology CDS 2293628 2295052 . + 0 ID=cds-WP_005607699.1;Parent=gene-D1109_RS11020;Dbxref=Genbank:WP_005607699.1;Name=WP_005607699.1;Ontology_term=GO:0006096,GO:0045454,GO:0051068,GO:0004148;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase activity|0004148||IEA;go_process=glycolytic process|0006096||IEA,cell redox homeostasis|0045454||IEA,dihydrolipoamide metabolic process|0051068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011272714.1;locus_tag=D1109_RS11020;product=dihydrolipoyl dehydrogenase;protein_id=WP_005607699.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2295312 2295387 . + . ID=gene-D1109_RS11025;Name=D1109_RS11025;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS11025;old_locus_tag=D1109_11065 NZ_CP031858.1 tRNAscan-SE tRNA 2295312 2295387 . + . ID=rna-D1109_RS11025;Parent=gene-D1109_RS11025;anticodon=(pos:2295345..2295347);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS11025;product=tRNA-Gly NZ_CP031858.1 tRNAscan-SE exon 2295312 2295387 . + . ID=exon-D1109_RS11025-1;Parent=rna-D1109_RS11025;anticodon=(pos:2295345..2295347);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS11025;product=tRNA-Gly NZ_CP031858.1 RefSeq gene 2295405 2295478 . + . ID=gene-D1109_RS11030;Name=D1109_RS11030;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS11030;old_locus_tag=D1109_11070 NZ_CP031858.1 tRNAscan-SE tRNA 2295405 2295478 . + . ID=rna-D1109_RS11030;Parent=gene-D1109_RS11030;anticodon=(pos:2295437..2295439);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS11030;product=tRNA-Cys NZ_CP031858.1 tRNAscan-SE exon 2295405 2295478 . + . ID=exon-D1109_RS11030-1;Parent=rna-D1109_RS11030;anticodon=(pos:2295437..2295439);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS11030;product=tRNA-Cys NZ_CP031858.1 RefSeq gene 2295761 2296138 . - . ID=gene-D1109_RS11035;Name=D1109_RS11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS11035;old_locus_tag=D1109_11075 NZ_CP031858.1 Protein Homology CDS 2295761 2296138 . - 0 ID=cds-WP_009874884.1;Parent=gene-D1109_RS11035;Dbxref=Genbank:WP_009874884.1;Name=WP_009874884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012262955.1;locus_tag=D1109_RS11035;product=hypothetical protein;protein_id=WP_009874884.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2296267 2296566 . - . ID=gene-D1109_RS11040;Name=D1109_RS11040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS11040;old_locus_tag=D1109_11080 NZ_CP031858.1 Protein Homology CDS 2296267 2296566 . - 0 ID=cds-WP_005597207.1;Parent=gene-D1109_RS11040;Dbxref=Genbank:WP_005597207.1;Name=WP_005597207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597207.1;locus_tag=D1109_RS11040;product=DUF4298 domain-containing protein;protein_id=WP_005597207.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2296645 2298288 . - . ID=gene-D1109_RS11045;Name=ushA;gbkey=Gene;gene=ushA;gene_biotype=protein_coding;locus_tag=D1109_RS11045;old_locus_tag=D1109_11085 NZ_CP031858.1 Protein Homology CDS 2296645 2298288 . - 0 ID=cds-WP_005607695.1;Parent=gene-D1109_RS11045;Dbxref=Genbank:WP_005607695.1;Name=WP_005607695.1;Ontology_term=GO:0009166,GO:0000166,GO:0046872;gbkey=CDS;gene=ushA;go_function=nucleotide binding|0000166||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597203.1;locus_tag=D1109_RS11045;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA;protein_id=WP_005607695.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2298369 2298731 . - . ID=gene-D1109_RS11050;Name=D1109_RS11050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS11050;old_locus_tag=D1109_11090 NZ_CP031858.1 Protein Homology CDS 2298369 2298731 . - 0 ID=cds-WP_005597201.1;Parent=gene-D1109_RS11050;Dbxref=Genbank:WP_005597201.1;Name=WP_005597201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005615092.1;locus_tag=D1109_RS11050;product=diacylglycerol kinase;protein_id=WP_005597201.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2298980 2300194 . + . ID=gene-D1109_RS11055;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=protein_coding;locus_tag=D1109_RS11055;old_locus_tag=D1109_11095 NZ_CP031858.1 Protein Homology CDS 2298980 2300194 . + 0 ID=cds-WP_005597199.1;Parent=gene-D1109_RS11055;Dbxref=Genbank:WP_005597199.1;Name=WP_005597199.1;Ontology_term=GO:0015826,GO:0032329,GO:0015293,GO:0016021;gbkey=CDS;gene=sstT;go_component=integral component of membrane|0016021||IEA;go_function=symporter activity|0015293||IEA;go_process=threonine transport|0015826||IEA,serine transport|0032329||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005615089.1;locus_tag=D1109_RS11055;product=serine/threonine transporter SstT;protein_id=WP_005597199.1;transl_table=11 NZ_CP031858.1 RefSeq pseudogene 2300294 2302589 . + . ID=gene-D1109_RS11060;Name=D1109_RS11060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D1109_RS11060;old_locus_tag=D1109_11100;pseudo=true NZ_CP031858.1 Protein Homology CDS 2300294 2302589 . + 0 ID=cds-D1109_RS11060;Parent=gene-D1109_RS11060;Note=frameshifted;Ontology_term=GO:0009290,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=DNA import into cell involved in transformation|0009290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005607692.1;locus_tag=D1109_RS11060;product=DNA internalization-related competence protein ComEC/Rec2;pseudo=true;transl_table=11 NZ_CP031858.1 RefSeq gene 2302624 2303709 . - . ID=gene-D1109_RS11065;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=D1109_RS11065;old_locus_tag=D1109_11105 NZ_CP031858.1 Protein Homology CDS 2302624 2303709 . - 0 ID=cds-WP_009874882.1;Parent=gene-D1109_RS11065;Dbxref=Genbank:WP_009874882.1;Name=WP_009874882.1;Ontology_term=GO:0006400,GO:0008616,GO:0051075;gbkey=CDS;gene=queA;go_function=S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity|0051075||IEA;go_process=tRNA modification|0006400||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005601009.1;locus_tag=D1109_RS11065;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_009874882.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2303757 2304686 . - . ID=gene-D1109_RS11070;Name=yvcK;gbkey=Gene;gene=yvcK;gene_biotype=protein_coding;locus_tag=D1109_RS11070;old_locus_tag=D1109_11110 NZ_CP031858.1 Protein Homology CDS 2303757 2304686 . - 0 ID=cds-WP_005612036.1;Parent=gene-D1109_RS11070;Dbxref=Genbank:WP_005612036.1;Name=WP_005612036.1;gbkey=CDS;gene=yvcK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005612036.1;locus_tag=D1109_RS11070;product=uridine diphosphate-N-acetylglucosamine-binding protein YvcK;protein_id=WP_005612036.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2304716 2305777 . - . ID=gene-D1109_RS11075;Name=D1109_RS11075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS11075;old_locus_tag=D1109_11115 NZ_CP031858.1 Protein Homology CDS 2304716 2305777 . - 0 ID=cds-WP_005612034.1;Parent=gene-D1109_RS11075;Dbxref=Genbank:WP_005612034.1;Name=WP_005612034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604294.1;locus_tag=D1109_RS11075;product=AI-2E family transporter;protein_id=WP_005612034.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2305836 2306591 . - . ID=gene-D1109_RS11080;Name=D1109_RS11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS11080;old_locus_tag=D1109_11120 NZ_CP031858.1 Protein Homology CDS 2305836 2306591 . - 0 ID=cds-WP_009874881.1;Parent=gene-D1109_RS11080;Dbxref=Genbank:WP_009874881.1;Name=WP_009874881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874881.1;locus_tag=D1109_RS11080;product=class I SAM-dependent methyltransferase;protein_id=WP_009874881.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2306759 2307001 . + . ID=gene-D1109_RS11085;Name=D1109_RS11085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS11085;old_locus_tag=D1109_11125 NZ_CP031858.1 Protein Homology CDS 2306759 2307001 . + 0 ID=cds-WP_005601001.1;Parent=gene-D1109_RS11085;Dbxref=Genbank:WP_005601001.1;Name=WP_005601001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597192.1;locus_tag=D1109_RS11085;product=ribosome alternative rescue factor ArfA;protein_id=WP_005601001.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2307050 2307126 . - . ID=gene-D1109_RS11090;Name=D1109_RS11090;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS11090;old_locus_tag=D1109_11130 NZ_CP031858.1 tRNAscan-SE tRNA 2307050 2307126 . - . ID=rna-D1109_RS11090;Parent=gene-D1109_RS11090;anticodon=(pos:complement(2307090..2307092));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS11090;product=tRNA-Val NZ_CP031858.1 tRNAscan-SE exon 2307050 2307126 . - . ID=exon-D1109_RS11090-1;Parent=rna-D1109_RS11090;anticodon=(pos:complement(2307090..2307092));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS11090;product=tRNA-Val NZ_CP031858.1 RefSeq gene 2307190 2308002 . - . ID=gene-D1109_RS11095;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=D1109_RS11095;old_locus_tag=D1109_11135 NZ_CP031858.1 Protein Homology CDS 2307190 2308002 . - 0 ID=cds-WP_011848461.1;Parent=gene-D1109_RS11095;Dbxref=Genbank:WP_011848461.1;Name=WP_011848461.1;Ontology_term=GO:0006139,GO:0008803;gbkey=CDS;gene=apaH;go_function=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity|0008803||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991397.1;locus_tag=D1109_RS11095;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH;protein_id=WP_011848461.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2308027 2308713 . - . ID=gene-D1109_RS11100;Name=D1109_RS11100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS11100;old_locus_tag=D1109_11140 NZ_CP031858.1 Protein Homology CDS 2308027 2308713 . - 0 ID=cds-WP_005617247.1;Parent=gene-D1109_RS11100;Dbxref=Genbank:WP_005617247.1;Name=WP_005617247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604287.1;locus_tag=D1109_RS11100;product=LrgB family protein;protein_id=WP_005617247.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2308710 2309081 . - . ID=gene-D1109_RS11105;Name=D1109_RS11105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS11105;old_locus_tag=D1109_11145 NZ_CP031858.1 Protein Homology CDS 2308710 2309081 . - 0 ID=cds-WP_005597186.1;Parent=gene-D1109_RS11105;Dbxref=Genbank:WP_005597186.1;Name=WP_005597186.1;Ontology_term=GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604285.1;locus_tag=D1109_RS11105;product=CidA/LrgA family protein;protein_id=WP_005597186.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2309156 2311132 . - . ID=gene-D1109_RS11110;Name=D1109_RS11110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS11110;old_locus_tag=D1109_11150 NZ_CP031858.1 Protein Homology CDS 2309156 2311132 . - 0 ID=cds-WP_237611129.1;Parent=gene-D1109_RS11110;Dbxref=Genbank:WP_237611129.1;Name=WP_237611129.1;Ontology_term=GO:0006401,GO:0008859;gbkey=CDS;go_function=exoribonuclease II activity|0008859||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005617246.1;locus_tag=D1109_RS11110;product=exoribonuclease II;protein_id=WP_237611129.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2311264 2311542 . - . ID=gene-D1109_RS11115;Name=D1109_RS11115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS11115;old_locus_tag=D1109_11155 NZ_CP031858.1 Protein Homology CDS 2311264 2311542 . - 0 ID=cds-WP_005612024.1;Parent=gene-D1109_RS11115;Dbxref=Genbank:WP_005612024.1;Name=WP_005612024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604279.1;locus_tag=D1109_RS11115;product=BrnA antitoxin family protein;protein_id=WP_005612024.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2311517 2311795 . - . ID=gene-D1109_RS11120;Name=D1109_RS11120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS11120;old_locus_tag=D1109_11160 NZ_CP031858.1 Protein Homology CDS 2311517 2311795 . - 0 ID=cds-WP_005600991.1;Parent=gene-D1109_RS11120;Dbxref=Genbank:WP_005600991.1;Name=WP_005600991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012262949.1;locus_tag=D1109_RS11120;product=BrnT family toxin;protein_id=WP_005600991.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2311990 2312778 . - . ID=gene-D1109_RS11125;Name=D1109_RS11125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS11125;old_locus_tag=D1109_11165 NZ_CP031858.1 Protein Homology CDS 2311990 2312778 . - 0 ID=cds-WP_237611130.1;Parent=gene-D1109_RS11125;Dbxref=Genbank:WP_237611130.1;Name=WP_237611130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018356566.1;locus_tag=D1109_RS11125;product=SDR family oxidoreductase;protein_id=WP_237611130.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2312982 2313707 . - . ID=gene-D1109_RS11130;Name=cmoA;gbkey=Gene;gene=cmoA;gene_biotype=protein_coding;locus_tag=D1109_RS11130;old_locus_tag=D1109_11170 NZ_CP031858.1 Protein Homology CDS 2312982 2313707 . - 0 ID=cds-WP_005615038.1;Parent=gene-D1109_RS11130;Dbxref=Genbank:WP_005615038.1;Name=WP_005615038.1;Ontology_term=GO:0006400,GO:0008168;gbkey=CDS;gene=cmoA;go_function=methyltransferase activity|0008168||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005607644.1;locus_tag=D1109_RS11130;product=carboxy-S-adenosyl-L-methionine synthase CmoA;protein_id=WP_005615038.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2313715 2314500 . - . ID=gene-D1109_RS11135;Name=D1109_RS11135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS11135;old_locus_tag=D1109_11175 NZ_CP031858.1 Protein Homology CDS 2313715 2314500 . - 0 ID=cds-WP_005607642.1;Parent=gene-D1109_RS11135;Dbxref=Genbank:WP_005607642.1;Name=WP_005607642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652876.1;locus_tag=D1109_RS11135;product=alpha/beta fold hydrolase;protein_id=WP_005607642.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2314624 2315184 . + . ID=gene-D1109_RS11140;Name=seqA;gbkey=Gene;gene=seqA;gene_biotype=protein_coding;locus_tag=D1109_RS11140;old_locus_tag=D1109_11180 NZ_CP031858.1 Protein Homology CDS 2314624 2315184 . + 0 ID=cds-WP_005597175.1;Parent=gene-D1109_RS11140;Dbxref=Genbank:WP_005597175.1;Name=WP_005597175.1;Ontology_term=GO:0032297,GO:0003677;gbkey=CDS;gene=seqA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-dependent DNA replication initiation|0032297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012262946.1;locus_tag=D1109_RS11140;product=replication initiation negative regulator SeqA;protein_id=WP_005597175.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2315202 2316632 . + . ID=gene-D1109_RS11145;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=D1109_RS11145;old_locus_tag=D1109_11185 NZ_CP031858.1 Protein Homology CDS 2315202 2316632 . + 0 ID=cds-WP_005597173.1;Parent=gene-D1109_RS11145;Dbxref=Genbank:WP_005597173.1;Name=WP_005597173.1;Ontology_term=GO:0009234,GO:0005524,GO:0008756;gbkey=CDS;gene=menE;go_function=ATP binding|0005524||IEA,o-succinylbenzoate-CoA ligase activity|0008756||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005615034.1;locus_tag=D1109_RS11145;product=o-succinylbenzoate--CoA ligase;protein_id=WP_005597173.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2316613 2319957 . + . ID=gene-D1109_RS11150;Name=mscK;gbkey=Gene;gene=mscK;gene_biotype=protein_coding;locus_tag=D1109_RS11150;old_locus_tag=D1109_11190 NZ_CP031858.1 Protein Homology CDS 2316613 2319957 . + 0 ID=cds-WP_237611131.1;Parent=gene-D1109_RS11150;Dbxref=Genbank:WP_237611131.1;Name=WP_237611131.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscK;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600984.1;locus_tag=D1109_RS11150;product=mechanosensitive channel MscK;protein_id=WP_237611131.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2319975 2323283 . + . ID=gene-D1109_RS11155;Name=mscK;gbkey=Gene;gene=mscK;gene_biotype=protein_coding;locus_tag=D1109_RS11155;old_locus_tag=D1109_11195 NZ_CP031858.1 Protein Homology CDS 2319975 2323283 . + 0 ID=cds-WP_237611132.1;Parent=gene-D1109_RS11155;Dbxref=Genbank:WP_237611132.1;Name=WP_237611132.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscK;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604270.1;locus_tag=D1109_RS11155;product=mechanosensitive channel MscK;protein_id=WP_237611132.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2323305 2324387 . + . ID=gene-D1109_RS11160;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=D1109_RS11160;old_locus_tag=D1109_11200 NZ_CP031858.1 Protein Homology CDS 2323305 2324387 . + 0 ID=cds-WP_005613846.1;Parent=gene-D1109_RS11160;Dbxref=Genbank:WP_005613846.1;Name=WP_005613846.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012072711.1;locus_tag=D1109_RS11160;product=chorismate synthase;protein_id=WP_005613846.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2324482 2325312 . + . ID=gene-D1109_RS11165;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=D1109_RS11165;old_locus_tag=D1109_11205 NZ_CP031858.1 Protein Homology CDS 2324482 2325312 . + 0 ID=cds-WP_005618960.1;Parent=gene-D1109_RS11165;Dbxref=Genbank:WP_005618960.1;Name=WP_005618960.1;Ontology_term=GO:0006508,GO:0004252,GO:0030288;gbkey=CDS;gene=mepA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012478426.1;locus_tag=D1109_RS11165;product=penicillin-insensitive murein endopeptidase;protein_id=WP_005618960.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2325361 2326806 . - . ID=gene-D1109_RS11170;Name=D1109_RS11170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS11170;old_locus_tag=D1109_11210 NZ_CP031858.1 Protein Homology CDS 2325361 2326806 . - 0 ID=cds-WP_237611133.1;Parent=gene-D1109_RS11170;Dbxref=Genbank:WP_237611133.1;Name=WP_237611133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005607636.1;locus_tag=D1109_RS11170;product=alkaline phosphatase;protein_id=WP_237611133.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2326989 2328905 . + . ID=gene-D1109_RS11175;Name=D1109_RS11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS11175;old_locus_tag=D1109_11215 NZ_CP031858.1 Protein Homology CDS 2326989 2328905 . + 0 ID=cds-WP_237611134.1;Parent=gene-D1109_RS11175;Dbxref=Genbank:WP_237611134.1;Name=WP_237611134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875554.1;locus_tag=D1109_RS11175;product=DNA topoisomerase III;protein_id=WP_237611134.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2329037 2329363 . + . ID=gene-D1109_RS11180;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=D1109_RS11180;old_locus_tag=D1109_11220 NZ_CP031858.1 Protein Homology CDS 2329037 2329363 . + 0 ID=cds-WP_005597146.1;Parent=gene-D1109_RS11180;Dbxref=Genbank:WP_005597146.1;Name=WP_005597146.1;Ontology_term=GO:0043952,GO:0015450,GO:0005887;gbkey=CDS;gene=secG;go_component=integral component of plasma membrane|0005887||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597146.1;locus_tag=D1109_RS11180;product=preprotein translocase subunit SecG;protein_id=WP_005597146.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2329382 2329467 . + . ID=gene-D1109_RS11185;Name=D1109_RS11185;gbkey=Gene;gene_biotype=tRNA;locus_tag=D1109_RS11185;old_locus_tag=D1109_11225 NZ_CP031858.1 tRNAscan-SE tRNA 2329382 2329467 . + . ID=rna-D1109_RS11185;Parent=gene-D1109_RS11185;anticodon=(pos:2329416..2329418);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS11185;product=tRNA-Leu NZ_CP031858.1 tRNAscan-SE exon 2329382 2329467 . + . ID=exon-D1109_RS11185-1;Parent=rna-D1109_RS11185;anticodon=(pos:2329416..2329418);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.7;locus_tag=D1109_RS11185;product=tRNA-Leu NZ_CP031858.1 RefSeq gene 2329612 2330643 . + . ID=gene-D1109_RS11190;Name=degS;gbkey=Gene;gene=degS;gene_biotype=protein_coding;locus_tag=D1109_RS11190;old_locus_tag=D1109_11230 NZ_CP031858.1 Protein Homology CDS 2329612 2330643 . + 0 ID=cds-WP_005600971.1;Parent=gene-D1109_RS11190;Dbxref=Genbank:WP_005600971.1;Name=WP_005600971.1;Ontology_term=GO:0008236,GO:0045152,GO:0030288;gbkey=CDS;gene=degS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=serine-type peptidase activity|0008236||IEA,antisigma factor binding|0045152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597144.1;locus_tag=D1109_RS11190;product=outer membrane-stress sensor serine endopeptidase DegS;protein_id=WP_005600971.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2330673 2331347 . + . ID=gene-D1109_RS11195;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=D1109_RS11195;old_locus_tag=D1109_11235 NZ_CP031858.1 Protein Homology CDS 2330673 2331347 . + 0 ID=cds-WP_005607632.1;Parent=gene-D1109_RS11195;Dbxref=Genbank:WP_005607632.1;Name=WP_005607632.1;Ontology_term=GO:0015949,GO:0004127;gbkey=CDS;gene=cmk;go_function=cytidylate kinase activity|0004127||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253657.1;locus_tag=D1109_RS11195;product=(d)CMP kinase;protein_id=WP_005607632.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2331444 2333108 . + . ID=gene-D1109_RS11200;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=D1109_RS11200;old_locus_tag=D1109_11240 NZ_CP031858.1 Protein Homology CDS 2331444 2333108 . + 0 ID=cds-WP_005618961.1;Parent=gene-D1109_RS11200;Dbxref=Genbank:WP_005618961.1;Name=WP_005618961.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsA;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006717605.1;locus_tag=D1109_RS11200;product=30S ribosomal protein S1;protein_id=WP_005618961.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2333182 2333463 . + . ID=gene-D1109_RS11205;Name=D1109_RS11205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS11205;old_locus_tag=D1109_11245 NZ_CP031858.1 Protein Homology CDS 2333182 2333463 . + 0 ID=cds-WP_005597138.1;Parent=gene-D1109_RS11205;Dbxref=Genbank:WP_005597138.1;Name=WP_005597138.1;Ontology_term=GO:0006310,GO:0006355,GO:0003677,GO:0005694;gbkey=CDS;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of transcription%2C DNA-templated|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597138.1;locus_tag=D1109_RS11205;product=integration host factor subunit beta;protein_id=WP_005597138.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2333532 2333822 . + . ID=gene-D1109_RS11210;Name=D1109_RS11210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS11210;old_locus_tag=D1109_11250 NZ_CP031858.1 Protein Homology CDS 2333532 2333822 . + 0 ID=cds-WP_005597136.1;Parent=gene-D1109_RS11210;Dbxref=Genbank:WP_005597136.1;Name=WP_005597136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991418.1;locus_tag=D1109_RS11210;product=LapA family protein;protein_id=WP_005597136.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2333822 2335018 . + . ID=gene-D1109_RS11215;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=protein_coding;locus_tag=D1109_RS11215;old_locus_tag=D1109_11255 NZ_CP031858.1 Protein Homology CDS 2333822 2335018 . + 0 ID=cds-WP_043995082.1;Parent=gene-D1109_RS11215;Dbxref=Genbank:WP_043995082.1;Name=WP_043995082.1;gbkey=CDS;gene=lapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618962.1;locus_tag=D1109_RS11215;product=lipopolysaccharide assembly protein LapB;protein_id=WP_043995082.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2335043 2335735 . + . ID=gene-D1109_RS11220;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=D1109_RS11220;old_locus_tag=D1109_11260 NZ_CP031858.1 Protein Homology CDS 2335043 2335735 . + 0 ID=cds-WP_005597131.1;Parent=gene-D1109_RS11220;Dbxref=Genbank:WP_005597131.1;Name=WP_005597131.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991420.1;locus_tag=D1109_RS11220;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_005597131.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2335815 2336126 . + . ID=gene-D1109_RS11225;Name=yciH;gbkey=Gene;gene=yciH;gene_biotype=protein_coding;locus_tag=D1109_RS11225;old_locus_tag=D1109_11265 NZ_CP031858.1 Protein Homology CDS 2335815 2336126 . + 0 ID=cds-WP_005597129.1;Parent=gene-D1109_RS11225;Dbxref=Genbank:WP_005597129.1;Name=WP_005597129.1;gbkey=CDS;gene=yciH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597129.1;locus_tag=D1109_RS11225;product=stress response translation initiation inhibitor YciH;protein_id=WP_005597129.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2336199 2336648 . - . ID=gene-D1109_RS11230;Name=D1109_RS11230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS11230;old_locus_tag=D1109_11270 NZ_CP031858.1 Protein Homology CDS 2336199 2336648 . - 0 ID=cds-WP_005597127.1;Parent=gene-D1109_RS11230;Dbxref=Genbank:WP_005597127.1;Name=WP_005597127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875496.1;locus_tag=D1109_RS11230;product=hypothetical protein;protein_id=WP_005597127.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2336695 2337408 . - . ID=gene-D1109_RS11235;Name=D1109_RS11235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS11235;old_locus_tag=D1109_11275 NZ_CP031858.1 Protein Homology CDS 2336695 2337408 . - 0 ID=cds-WP_005615012.1;Parent=gene-D1109_RS11235;Dbxref=Genbank:WP_005615012.1;Name=WP_005615012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651968.1;locus_tag=D1109_RS11235;product=DUF554 domain-containing protein;protein_id=WP_005615012.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2337411 2337983 . - . ID=gene-D1109_RS11240;Name=D1109_RS11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS11240;old_locus_tag=D1109_11280 NZ_CP031858.1 Protein Homology CDS 2337411 2337983 . - 0 ID=cds-WP_237611135.1;Parent=gene-D1109_RS11240;Dbxref=Genbank:WP_237611135.1;Name=WP_237611135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991424.1;locus_tag=D1109_RS11240;product=UbiX family flavin prenyltransferase;protein_id=WP_237611135.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2338043 2338414 . - . ID=gene-D1109_RS11245;Name=D1109_RS11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS11245;old_locus_tag=D1109_11285 NZ_CP031858.1 Protein Homology CDS 2338043 2338414 . - 0 ID=cds-WP_005617218.1;Parent=gene-D1109_RS11245;Dbxref=Genbank:WP_005617218.1;Name=WP_005617218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005622983.1;locus_tag=D1109_RS11245;product=SirB2 family protein;protein_id=WP_005617218.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2338459 2338989 . - . ID=gene-D1109_RS11250;Name=D1109_RS11250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS11250;old_locus_tag=D1109_11290 NZ_CP031858.1 Protein Homology CDS 2338459 2338989 . - 0 ID=cds-WP_005607621.1;Parent=gene-D1109_RS11250;Dbxref=Genbank:WP_005607621.1;Name=WP_005607621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604242.1;locus_tag=D1109_RS11250;product=ribosome-associated protein;protein_id=WP_005607621.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2339097 2340446 . + . ID=gene-D1109_RS11255;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=D1109_RS11255;old_locus_tag=D1109_11295 NZ_CP031858.1 Protein Homology CDS 2339097 2340446 . + 0 ID=cds-WP_005597118.1;Parent=gene-D1109_RS11255;Dbxref=Genbank:WP_005597118.1;Name=WP_005597118.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=pmbA;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991427.1;locus_tag=D1109_RS11255;product=metalloprotease PmbA;protein_id=WP_005597118.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2340716 2341207 . - . ID=gene-D1109_RS11260;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=D1109_RS11260;old_locus_tag=D1109_11300 NZ_CP031858.1 Protein Homology CDS 2340716 2341207 . - 0 ID=cds-WP_005597116.1;Parent=gene-D1109_RS11260;Dbxref=Genbank:WP_005597116.1;Name=WP_005597116.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005647229.1;locus_tag=D1109_RS11260;product=acetolactate synthase small subunit;protein_id=WP_005597116.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2341200 2342924 . - . ID=gene-D1109_RS11265;Name=D1109_RS11265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS11265;old_locus_tag=D1109_11305 NZ_CP031858.1 Protein Homology CDS 2341200 2342924 . - 0 ID=cds-WP_005597115.1;Parent=gene-D1109_RS11265;Dbxref=Genbank:WP_005597115.1;Name=WP_005597115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651963.1;locus_tag=D1109_RS11265;product=acetolactate synthase 3 large subunit;protein_id=WP_005597115.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2343242 2343958 . - . ID=gene-D1109_RS11270;Name=can;gbkey=Gene;gene=can;gene_biotype=protein_coding;locus_tag=D1109_RS11270;old_locus_tag=D1109_11310 NZ_CP031858.1 Protein Homology CDS 2343242 2343958 . - 0 ID=cds-WP_005597113.1;Parent=gene-D1109_RS11270;Dbxref=Genbank:WP_005597113.1;Name=WP_005597113.1;Ontology_term=GO:0015976;gbkey=CDS;gene=can;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597113.1;locus_tag=D1109_RS11270;product=carbonate dehydratase;protein_id=WP_005597113.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2344076 2344282 . - . ID=gene-D1109_RS11275;Name=cspD;gbkey=Gene;gene=cspD;gene_biotype=protein_coding;locus_tag=D1109_RS11275;old_locus_tag=D1109_11315 NZ_CP031858.1 Protein Homology CDS 2344076 2344282 . - 0 ID=cds-WP_005597111.1;Parent=gene-D1109_RS11275;Dbxref=Genbank:WP_005597111.1;Name=WP_005597111.1;Ontology_term=GO:0008156,GO:0009409;gbkey=CDS;gene=cspD;go_process=negative regulation of DNA replication|0008156||IEA,response to cold|0009409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597111.1;locus_tag=D1109_RS11275;product=cold shock domain-containing protein CspD;protein_id=WP_005597111.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2344390 2344962 . - . ID=gene-D1109_RS11280;Name=D1109_RS11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS11280;old_locus_tag=D1109_11320 NZ_CP031858.1 Protein Homology CDS 2344390 2344962 . - 0 ID=cds-WP_005620830.1;Parent=gene-D1109_RS11280;Dbxref=Genbank:WP_005620830.1;Name=WP_005620830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005620830.1;locus_tag=D1109_RS11280;product=DUF1439 domain-containing protein;protein_id=WP_005620830.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2345285 2346433 . + . ID=gene-D1109_RS11285;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=D1109_RS11285;old_locus_tag=D1109_11325 NZ_CP031858.1 Protein Homology CDS 2345285 2346433 . + 0 ID=cds-WP_005611994.1;Parent=gene-D1109_RS11285;Dbxref=Genbank:WP_005611994.1;Name=WP_005611994.1;Ontology_term=GO:0006400,GO:0008479;gbkey=CDS;gene=tgt;go_function=queuine tRNA-ribosyltransferase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651956.1;locus_tag=D1109_RS11285;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_005611994.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2346688 2347407 . - . ID=gene-D1109_RS11290;Name=D1109_RS11290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS11290;old_locus_tag=D1109_11330 NZ_CP031858.1 Protein Homology CDS 2346688 2347407 . - 0 ID=cds-WP_237611136.1-2;Parent=gene-D1109_RS11290;Dbxref=Genbank:WP_237611136.1;Name=WP_237611136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005822938.1;locus_tag=D1109_RS11290;product=helix-turn-helix domain-containing protein;protein_id=WP_237611136.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2347602 2347871 . + . ID=gene-D1109_RS11295;Name=D1109_RS11295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS11295;old_locus_tag=D1109_11335 NZ_CP031858.1 Protein Homology CDS 2347602 2347871 . + 0 ID=cds-WP_237611137.1-2;Parent=gene-D1109_RS11295;Dbxref=Genbank:WP_237611137.1;Name=WP_237611137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005822937.1;locus_tag=D1109_RS11295;product=transcriptional regulator;protein_id=WP_237611137.1;transl_table=11 NZ_CP031858.1 RefSeq pseudogene 2347881 2349850 . + . ID=gene-D1109_RS11300;Name=D1109_RS11300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D1109_RS11300;old_locus_tag=D1109_11340;pseudo=true NZ_CP031858.1 Protein Homology CDS 2347881 2349850 . + 0 ID=cds-D1109_RS11300;Parent=gene-D1109_RS11300;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005606443.1;locus_tag=D1109_RS11300;product=Mu transposase C-terminal domain-containing protein;pseudo=true;transl_table=11 NZ_CP031858.1 RefSeq pseudogene 2349860 2350740 . + . ID=gene-D1109_RS11305;Name=D1109_RS11305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D1109_RS11305;old_locus_tag=D1109_11345;pseudo=true NZ_CP031858.1 Protein Homology CDS 2349860 2350740 . + 0 ID=cds-D1109_RS11305;Parent=gene-D1109_RS11305;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005659430.1;locus_tag=D1109_RS11305;product=AAA family ATPase;pseudo=true;transl_table=11 NZ_CP031858.1 RefSeq gene 2350756 2351001 . + . ID=gene-D1109_RS11310;Name=D1109_RS11310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS11310;old_locus_tag=D1109_11350 NZ_CP031858.1 GeneMarkS-2+ CDS 2350756 2351001 . + 0 ID=cds-WP_111750133.1-2;Parent=gene-D1109_RS11310;Dbxref=Genbank:WP_111750133.1;Name=WP_111750133.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=D1109_RS11310;product=hypothetical protein;protein_id=WP_111750133.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2351012 2351209 . + . ID=gene-D1109_RS11315;Name=D1109_RS11315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS11315;old_locus_tag=D1109_11355 NZ_CP031858.1 Protein Homology CDS 2351012 2351209 . + 0 ID=cds-WP_237611138.1-2;Parent=gene-D1109_RS11315;Dbxref=Genbank:WP_237611138.1;Name=WP_237611138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652733.1;locus_tag=D1109_RS11315;product=hypothetical protein;protein_id=WP_237611138.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2351206 2351550 . + . ID=gene-D1109_RS11320;Name=D1109_RS11320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS11320;old_locus_tag=D1109_11360 NZ_CP031858.1 Protein Homology CDS 2351206 2351550 . + 0 ID=cds-WP_237611139.1;Parent=gene-D1109_RS11320;Dbxref=Genbank:WP_237611139.1;Name=WP_237611139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652734.1;locus_tag=D1109_RS11320;product=hypothetical protein;protein_id=WP_237611139.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2351560 2351847 . + . ID=gene-D1109_RS11325;Name=D1109_RS11325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS11325;old_locus_tag=D1109_11365 NZ_CP031858.1 Protein Homology CDS 2351560 2351847 . + 0 ID=cds-WP_237611140.1-2;Parent=gene-D1109_RS11325;Dbxref=Genbank:WP_237611140.1;Name=WP_237611140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652735.1;locus_tag=D1109_RS11325;product=hypothetical protein;protein_id=WP_237611140.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2351819 2352043 . + . ID=gene-D1109_RS11330;Name=D1109_RS11330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS11330;old_locus_tag=D1109_11370 NZ_CP031858.1 Protein Homology CDS 2351819 2352043 . + 0 ID=cds-WP_237611141.1-2;Parent=gene-D1109_RS11330;Dbxref=Genbank:WP_237611141.1;Name=WP_237611141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005640647.1;locus_tag=D1109_RS11330;product=hypothetical protein;protein_id=WP_237611141.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2352046 2352663 . + . ID=gene-D1109_RS11335;Name=D1109_RS11335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS11335;old_locus_tag=D1109_11375 NZ_CP031858.1 Protein Homology CDS 2352046 2352663 . + 0 ID=cds-WP_237611142.1-2;Parent=gene-D1109_RS11335;Dbxref=Genbank:WP_237611142.1;Name=WP_237611142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651996.1;locus_tag=D1109_RS11335;product=DUF3164 family protein;protein_id=WP_237611142.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2352732 2352944 . + . ID=gene-D1109_RS11340;Name=D1109_RS11340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS11340;old_locus_tag=D1109_11380 NZ_CP031858.1 Protein Homology CDS 2352732 2352944 . + 0 ID=cds-WP_237611143.1-2;Parent=gene-D1109_RS11340;Dbxref=Genbank:WP_237611143.1;Name=WP_237611143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651997.1;locus_tag=D1109_RS11340;product=hypothetical protein;protein_id=WP_237611143.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2352955 2353344 . + . ID=gene-D1109_RS11345;Name=D1109_RS11345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS11345;old_locus_tag=D1109_11385 NZ_CP031858.1 Protein Homology CDS 2352955 2353344 . + 0 ID=cds-WP_237611144.1-2;Parent=gene-D1109_RS11345;Dbxref=Genbank:WP_237611144.1;Name=WP_237611144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249673.1;locus_tag=D1109_RS11345;product=hypothetical protein;protein_id=WP_237611144.1;transl_table=11 NZ_CP031858.1 RefSeq pseudogene 2353685 2354250 . + . ID=gene-D1109_RS11350;Name=D1109_RS11350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D1109_RS11350;old_locus_tag=D1109_11390;pseudo=true NZ_CP031858.1 Protein Homology CDS 2353685 2354250 . + 0 ID=cds-D1109_RS11350;Parent=gene-D1109_RS11350;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251272.1;locus_tag=D1109_RS11350;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP031858.1 RefSeq pseudogene 2354234 2354657 . + . ID=gene-D1109_RS11355;Name=D1109_RS11355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D1109_RS11355;old_locus_tag=D1109_11395;pseudo=true NZ_CP031858.1 Protein Homology CDS 2354234 2354657 . + 0 ID=cds-D1109_RS11355;Parent=gene-D1109_RS11355;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652740.1;locus_tag=D1109_RS11355;product=regulatory protein GemA;pseudo=true;transl_table=11 NZ_CP031858.1 RefSeq gene 2354973 2355533 . + . ID=gene-D1109_RS11360;Name=D1109_RS11360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS11360;old_locus_tag=D1109_11400 NZ_CP031858.1 Protein Homology CDS 2354973 2355533 . + 0 ID=cds-WP_237611145.1;Parent=gene-D1109_RS11360;Dbxref=Genbank:WP_237611145.1;Name=WP_237611145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005758691.1;locus_tag=D1109_RS11360;product=antA/AntB antirepressor family protein;protein_id=WP_237611145.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2355577 2355726 . + . ID=gene-D1109_RS11365;Name=D1109_RS11365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS11365;old_locus_tag=D1109_11405 NZ_CP031858.1 GeneMarkS-2+ CDS 2355577 2355726 . + 0 ID=cds-WP_237611146.1;Parent=gene-D1109_RS11365;Dbxref=Genbank:WP_237611146.1;Name=WP_237611146.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=D1109_RS11365;product=hypothetical protein;protein_id=WP_237611146.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2356278 2356421 . + . ID=gene-D1109_RS11370;Name=D1109_RS11370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS11370 NZ_CP031858.1 GeneMarkS-2+ CDS 2356278 2356421 . + 0 ID=cds-WP_237611147.1-2;Parent=gene-D1109_RS11370;Dbxref=Genbank:WP_237611147.1;Name=WP_237611147.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=D1109_RS11370;product=hypothetical protein;protein_id=WP_237611147.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2356537 2356962 . + . ID=gene-D1109_RS11375;Name=D1109_RS11375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS11375;old_locus_tag=D1109_11415 NZ_CP031858.1 Protein Homology CDS 2356537 2356962 . + 0 ID=cds-WP_126374502.1-2;Parent=gene-D1109_RS11375;Dbxref=Genbank:WP_126374502.1;Name=WP_126374502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652745.1;locus_tag=D1109_RS11375;product=mor transcription activator family protein;protein_id=WP_126374502.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2357049 2357594 . + . ID=gene-D1109_RS11380;Name=D1109_RS11380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS11380;old_locus_tag=D1109_11420 NZ_CP031858.1 Protein Homology CDS 2357049 2357594 . + 0 ID=cds-WP_237611148.1-2;Parent=gene-D1109_RS11380;Dbxref=Genbank:WP_237611148.1;Name=WP_237611148.1;Ontology_term=GO:0009253;gbkey=CDS;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018346172.1;locus_tag=D1109_RS11380;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_237611148.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2357597 2357818 . + . ID=gene-D1109_RS11385;Name=D1109_RS11385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS11385;old_locus_tag=D1109_11425 NZ_CP031858.1 Protein Homology CDS 2357597 2357818 . + 0 ID=cds-WP_237611149.1-2;Parent=gene-D1109_RS11385;Dbxref=Genbank:WP_237611149.1;Name=WP_237611149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652747.1;locus_tag=D1109_RS11385;product=DUF2644 domain-containing protein;protein_id=WP_237611149.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2357818 2358207 . + . ID=gene-D1109_RS11390;Name=D1109_RS11390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS11390;old_locus_tag=D1109_11430 NZ_CP031858.1 Protein Homology CDS 2357818 2358207 . + 0 ID=cds-WP_237611150.1-2;Parent=gene-D1109_RS11390;Dbxref=Genbank:WP_237611150.1;Name=WP_237611150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652748.1;locus_tag=D1109_RS11390;product=DUF2681 domain-containing protein;protein_id=WP_237611150.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2358219 2358374 . + . ID=gene-D1109_RS11395;Name=D1109_RS11395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS11395 NZ_CP031858.1 Protein Homology CDS 2358219 2358374 . + 0 ID=cds-WP_237611151.1-2;Parent=gene-D1109_RS11395;Dbxref=Genbank:WP_237611151.1;Name=WP_237611151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652749.1;locus_tag=D1109_RS11395;product=hypothetical protein;protein_id=WP_237611151.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2358367 2358624 . + . ID=gene-D1109_RS11400;Name=D1109_RS11400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS11400;old_locus_tag=D1109_11435 NZ_CP031858.1 Protein Homology CDS 2358367 2358624 . + 0 ID=cds-WP_237611152.1-2;Parent=gene-D1109_RS11400;Dbxref=Genbank:WP_237611152.1;Name=WP_237611152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005822915.1;locus_tag=D1109_RS11400;product=hypothetical protein;protein_id=WP_237611152.1;transl_table=11 NZ_CP031858.1 RefSeq gene 2358624 2358878 . + . ID=gene-D1109_RS11405;Name=D1109_RS11405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D1109_RS11405;old_locus_tag=D1109_11440 NZ_CP031858.1 Protein Homology CDS 2358624 2358878 . + 0 ID=cds-WP_039196635.1-2;Parent=gene-D1109_RS11405;Dbxref=Genbank:WP_039196635.1;Name=WP_039196635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005606393.1;locus_tag=D1109_RS11405;product=hypothetical protein;protein_id=WP_039196635.1;transl_table=11 NZ_CP031858.1 RefSeq pseudogene 2358888 2359387 . + . ID=gene-D1109_RS11410;Name=D1109_RS11410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D1109_RS11410;old_locus_tag=D1109_11445;pseudo=true NZ_CP031858.1 Protein Homology CDS 2358888 2359387 . + 0 ID=cds-D1109_RS11410;Parent=gene-D1109_RS11410;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652752.1;locus_tag=D1109_RS11410;product=DUF1804 family protein;pseudo=true;transl_table=11 NZ_CP031858.1 RefSeq pseudogene 2359567 2361158 . + . ID=gene-D1109_RS11415;Name=terL;gbkey=Gene;gene=terL;gene_biotype=pseudogene;locus_tag=D1109_RS11415;old_locus_tag=D1109_11450;pseudo=true NZ_CP031858.1 Protein Homology CDS 2359567 2361158 . + 0 ID=cds-D1109_RS11415;Parent=gene-D1109_RS11415;Note=frameshifted;gbkey=CDS;gene=terL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248652.1;locus_tag=D1109_RS11415;product=phage terminase large subunit;pseudo=true;transl_table=11 NZ_CP031858.1 RefSeq pseudogene 2361204 2361731 . + . ID=gene-D1109_RS00005;Name=D1109_RS00005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D1109_RS00005;old_locus_tag=D1109_00005;partial=true;pseudo=true NZ_CP031858.1 Protein Homology CDS 2361204 2361731 . + 0 ID=cds-D1109_RS00005;Parent=gene-D1109_RS00005;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005642602.1;locus_tag=D1109_RS00005;partial=true;product=DUF935 domain-containing protein;pseudo=true;transl_table=11 ###