locus-tag class description D1096_RS00005 PF00308 Bacterial dnaA protein D1096_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix D1096_RS00005 PF11638 DnaA N-terminal domain D1096_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain D1096_RS00010 PF02767 DNA polymerase III beta subunit, central domain D1096_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain D1096_RS00015 PF02463 RecF/RecN/SMC N terminal domain D1096_RS00020 PF00080 Copper/zinc superoxide dismutase (SODC) D1096_RS00025 PF02774 Semialdehyde dehydrogenase, dimerisation domain D1096_RS00025 PF01118 Semialdehyde dehydrogenase, NAD binding domain D1096_RS00035 PF02684 Lipid-A-disaccharide synthetase D1096_RS00040 PF01343 Peptidase family S49 D1096_RS00040 PF08496 Peptidase family S49 N-terminal D1096_RS00045 PF02381 MraZ protein, putative antitoxin-like D1096_RS00050 PF01795 MraW methylase family D1096_RS00055 PF04999 Cell division protein FtsL D1096_RS00060 PF00905 Penicillin binding protein transpeptidase domain D1096_RS00060 PF03717 Penicillin-binding Protein dimerisation domain D1096_RS00065 PF01225 Mur ligase family, catalytic domain D1096_RS00065 PF02875 Mur ligase family, glutamate ligase domain D1096_RS00065 PF08245 Mur ligase middle domain D1096_RS00070 PF01225 Mur ligase family, catalytic domain D1096_RS00070 PF02875 Mur ligase family, glutamate ligase domain D1096_RS00070 PF08245 Mur ligase middle domain D1096_RS00075 PF00953 Glycosyl transferase family 4 D1096_RS00075 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 D1096_RS00080 PF02875 Mur ligase family, glutamate ligase domain D1096_RS00080 PF08245 Mur ligase middle domain D1096_RS00085 PF01098 Cell cycle protein D1096_RS00090 PF04101 Glycosyltransferase family 28 C-terminal domain D1096_RS00090 PF03033 Glycosyltransferase family 28 N-terminal domain D1096_RS00095 PF01225 Mur ligase family, catalytic domain D1096_RS00095 PF02875 Mur ligase family, glutamate ligase domain D1096_RS00095 PF08245 Mur ligase middle domain D1096_RS00100 PF01820 D-ala D-ala ligase N-terminus D1096_RS00100 PF07478 D-ala D-ala ligase C-terminus D1096_RS00105 PF03799 Cell division protein FtsQ D1096_RS00105 PF08478 POTRA domain, FtsQ-type D1096_RS00110 PF02491 SHS2 domain inserted in FTSA D1096_RS00115 PF12327 FtsZ family, C-terminal domain D1096_RS00115 PF00091 Tubulin/FtsZ family, GTPase domain D1096_RS00120 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase D1096_RS00125 PF02463 RecF/RecN/SMC N terminal domain D1096_RS00130 PF00005 ABC transporter D1096_RS00130 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D1096_RS00135 PF00528 Binding-protein-dependent transport system inner membrane component D1096_RS00135 PF12911 N-terminal TM domain of oligopeptide transport permease C D1096_RS00140 PF00528 Binding-protein-dependent transport system inner membrane component D1096_RS00145 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D1096_RS00150 PF16658 Class II release factor RF3, C-terminal domain D1096_RS00150 PF03144 Elongation factor Tu domain 2 D1096_RS00150 PF00009 Elongation factor Tu GTP binding domain D1096_RS00165 PF01195 Peptidyl-tRNA hydrolase D1096_RS00170 PF01926 50S ribosome-binding GTPase D1096_RS00170 PF06071 Protein of unknown function (DUF933) D1096_RS00185 PF05433 Glycine zipper 2TM domain D1096_RS00190 PF06185 YecM protein D1096_RS00195 PF03485 Arginyl tRNA synthetase N terminal domain D1096_RS00195 PF05746 DALR anticodon binding domain D1096_RS00195 PF00750 tRNA synthetases class I (R) D1096_RS00200 PF01018 GTP1/OBG D1096_RS00200 PF01926 50S ribosome-binding GTPase D1096_RS00205 PF10786 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) D1096_RS00210 PF00588 SpoU rRNA Methylase family D1096_RS00210 PF08032 RNA 2'-O ribose methyltransferase substrate binding D1096_RS00215 PF13091 PLD-like domain D1096_RS00220 PF08264 Anticodon-binding domain of tRNA D1096_RS00220 PF00133 tRNA synthetases class I (I, L, M and V) D1096_RS00220 PF06827 Zinc finger found in FPG and IleRS D1096_RS00225 PF01687 Riboflavin kinase D1096_RS00225 PF06574 FAD synthetase D1096_RS00230 PF13521 AAA domain D1096_RS00230 PF01467 Cytidylyltransferase-like D1096_RS00235 PF00149 Calcineurin-like phosphoesterase D1096_RS00240 PF00072 Response regulator receiver domain D1096_RS00240 PF00486 Transcriptional regulatory protein, C terminal D1096_RS00255 PF01168 Alanine racemase, N-terminal domain D1096_RS00260 PF03144 Elongation factor Tu domain 2 D1096_RS00260 PF00679 Elongation factor G C-terminus D1096_RS00260 PF00009 Elongation factor Tu GTP binding domain D1096_RS00265 PF00462 Glutaredoxin D1096_RS00270 PF01138 3' exoribonuclease family, domain 1 D1096_RS00270 PF03725 3' exoribonuclease family, domain 2 D1096_RS00275 PF08340 Domain of unknown function (DUF1732) D1096_RS00275 PF03755 YicC-like family, N-terminal region D1096_RS00280 PF01571 Aminomethyltransferase folate-binding domain D1096_RS00285 PF00037 4Fe-4S binding domain D1096_RS00290 PF00196 Bacterial regulatory proteins, luxR family D1096_RS00290 PF00072 Response regulator receiver domain D1096_RS00295 PF01170 Putative RNA methylase family UPF0020 D1096_RS00295 PF02926 THUMP domain D1096_RS00295 PF10672 S-adenosylmethionine-dependent methyltransferase D1096_RS00300 PF00588 SpoU rRNA Methylase family D1096_RS00305 PF00923 Transaldolase/Fructose-6-phosphate aldolase D1096_RS00335 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D1096_RS00340 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D1096_RS00345 PF00528 Binding-protein-dependent transport system inner membrane component D1096_RS00350 PF00528 Binding-protein-dependent transport system inner membrane component D1096_RS00350 PF12911 N-terminal TM domain of oligopeptide transport permease C D1096_RS00355 PF00005 ABC transporter D1096_RS00355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D1096_RS00360 PF00005 ABC transporter D1096_RS00360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D1096_RS00365 PF06146 Phosphate-starvation-inducible E D1096_RS00375 PF01042 Endoribonuclease L-PSP D1096_RS00380 PF01063 Amino-transferase class IV D1096_RS00385 PF00462 Glutaredoxin D1096_RS00390 PF02132 RecR protein D1096_RS00390 PF13662 Toprim domain D1096_RS00395 PF02575 YbaB/EbfC DNA-binding family D1096_RS00400 PF03544 Gram-negative bacterial TonB protein C-terminal D1096_RS00405 PF02472 Biopolymer transport protein ExbD/TolR D1096_RS00410 PF01618 MotA/TolQ/ExbB proton channel family D1096_RS00415 PF00581 Rhodanese-like domain D1096_RS00425 PF03610 PTS system fructose IIA component D1096_RS00425 PF05524 PEP-utilising enzyme, N-terminal D1096_RS00425 PF00391 PEP-utilising enzyme, mobile domain D1096_RS00425 PF00381 PTS HPr component phosphorylation site D1096_RS00430 PF02734 DAK2 domain D1096_RS00435 PF02733 Dak1 domain D1096_RS00440 PF07992 Pyridine nucleotide-disulphide oxidoreductase D1096_RS00445 PF02348 Cytidylyltransferase D1096_RS00450 PF06078 Bacterial protein of unknown function (DUF937) D1096_RS00455 PF00293 NUDIX domain D1096_RS00455 PF09297 NADH pyrophosphatase zinc ribbon domain D1096_RS00460 PF00849 RNA pseudouridylate synthase D1096_RS00470 PF04186 FxsA cytoplasmic membrane protein D1096_RS00475 PF00557 Metallopeptidase family M24 D1096_RS00480 PF01206 Sulfurtransferase TusA D1096_RS00485 PF06877 Regulator of ribonuclease activity B D1096_RS00490 PF01926 50S ribosome-binding GTPase D1096_RS00500 PF02535 ZIP Zinc transporter D1096_RS00505 PF00920 Dehydratase family D1096_RS00515 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D1096_RS00515 PF00205 Thiamine pyrophosphate enzyme, central domain D1096_RS00515 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D1096_RS00520 PF02335 Cytochrome c552 D1096_RS00530 PF13247 4Fe-4S dicluster domain D1096_RS00535 PF03916 Polysulphide reductase, NrfD D1096_RS00540 PF05662 Coiled stalk of trimeric autotransporter adhesin D1096_RS00540 PF05658 Head domain of trimeric autotransporter adhesin D1096_RS00540 PF03895 YadA-like membrane anchor domain D1096_RS00540 PF13018 Extended Signal Peptide of Type V secretion system D1096_RS00540 PF03895 YadA-like membrane anchor domain D1096_RS00540 PF05658 Head domain of trimeric autotransporter adhesin D1096_RS00540 PF13018 Extended Signal Peptide of Type V secretion system D1096_RS00540 PF05662 Coiled stalk of trimeric autotransporter adhesin D1096_RS00545 PF00860 Permease family D1096_RS00550 PF18327 Proline utilization A proline dehydrogenase N-terminal domain D1096_RS00550 PF14850 DNA-binding domain of Proline dehydrogenase D1096_RS00550 PF01619 Proline dehydrogenase D1096_RS00550 PF00171 Aldehyde dehydrogenase family D1096_RS00555 PF00474 Sodium:solute symporter family D1096_RS00560 PF09339 IclR helix-turn-helix domain D1096_RS00560 PF01614 Bacterial transcriptional regulator D1096_RS00565 PF01812 5-formyltetrahydrofolate cyclo-ligase family D1096_RS00575 PF05164 Cell division protein ZapA D1096_RS00580 PF03695 Uncharacterised protein family (UPF0149) D1096_RS00585 PF01208 Uroporphyrinogen decarboxylase (URO-D) D1096_RS00590 PF04222 Protein of unknown function (DUF416) D1096_RS00595 PF00216 Bacterial DNA-binding protein D1096_RS00600 PF00303 Thymidylate synthase D1096_RS00610 PF06968 Biotin and Thiamin Synthesis associated domain D1096_RS00610 PF04055 Radical SAM superfamily D1096_RS00615 PF00313 'Cold-shock' DNA-binding domain D1096_RS00620 PF04352 ProQ/FINO family D1096_RS00625 PF17804 Tail specific protease N-terminal domain D1096_RS00625 PF03572 Peptidase family S41 D1096_RS00625 PF11818 C-terminal domain of tail specific protease (DUF3340) D1096_RS00625 PF00595 PDZ domain D1096_RS00630 PF03734 L,D-transpeptidase catalytic domain D1096_RS00635 PF05951 Bacterial protein of unknown function (DUF882) D1096_RS00640 PF00753 Metallo-beta-lactamase superfamily D1096_RS00655 PF01230 HIT domain D1096_RS00660 PF00950 ABC 3 transport family D1096_RS00665 PF00950 ABC 3 transport family D1096_RS00670 PF01351 Ribonuclease HII D1096_RS00675 PF03193 RsgA GTPase D1096_RS00680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1096_RS00680 PF03466 LysR substrate binding domain D1096_RS00685 PF13419 Haloacid dehalogenase-like hydrolase D1096_RS00690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1096_RS00690 PF03466 LysR substrate binding domain D1096_RS00700 PF00710 Asparaginase, N-terminal D1096_RS00700 PF17763 Glutaminase/Asparaginase C-terminal domain D1096_RS00705 PF06418 CTP synthase N-terminus D1096_RS00705 PF00117 Glutamine amidotransferase class-I D1096_RS00710 PF10063 Uncharacterized integral membrane protein (DUF2301) D1096_RS00715 PF00694 Aconitase C-terminal domain D1096_RS00720 PF00330 Aconitase family (aconitate hydratase) D1096_RS00725 PF05651 Putative sugar diacid recognition D1096_RS00725 PF17853 GGDEF-like domain D1096_RS00725 PF13556 PucR C-terminal helix-turn-helix domain D1096_RS00730 PF02447 GntP family permease D1096_RS00735 PF02595 Glycerate kinase family D1096_RS00740 PF00708 Acylphosphatase D1096_RS00745 PF11398 Protein of unknown function (DUF2813) D1096_RS00750 PF03641 Possible lysine decarboxylase D1096_RS00750 PF11892 Domain of unknown function (DUF3412) D1096_RS00750 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases D1096_RS00755 PF01207 Dihydrouridine synthase (Dus) D1096_RS00765 PF03477 ATP cone domain D1096_RS00765 PF02867 Ribonucleotide reductase, barrel domain D1096_RS00765 PF00317 Ribonucleotide reductase, all-alpha domain D1096_RS00770 PF01106 NifU-like domain D1096_RS00770 PF01521 Iron-sulphur cluster biosynthesis D1096_RS00775 PF11973 NQRA C-terminal domain D1096_RS00775 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) D1096_RS00780 PF03116 NQR2, RnfD, RnfE family D1096_RS00785 PF04205 FMN-binding domain D1096_RS00790 PF02508 Rnf-Nqr subunit, membrane protein D1096_RS00795 PF02508 Rnf-Nqr subunit, membrane protein D1096_RS00800 PF00970 Oxidoreductase FAD-binding domain D1096_RS00800 PF00111 2Fe-2S iron-sulfur cluster binding domain D1096_RS00800 PF00175 Oxidoreductase NAD-binding domain D1096_RS00805 PF02424 ApbE family D1096_RS00810 PF04400 (Na+)-NQR maturation NqrM D1096_RS00820 PF12832 MFS_1 like family D1096_RS00825 PF03807 NADP oxidoreductase coenzyme F420-dependent D1096_RS00825 PF14748 Pyrroline-5-carboxylate reductase dimerisation D1096_RS00830 PF04381 Putative exonuclease, RdgC D1096_RS00835 PF13419 Haloacid dehalogenase-like hydrolase D1096_RS00850 PF02508 Rnf-Nqr subunit, membrane protein D1096_RS00855 PF04060 Putative Fe-S cluster D1096_RS00860 PF13375 RnfC Barrel sandwich hybrid domain D1096_RS00860 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit D1096_RS00860 PF12838 4Fe-4S dicluster domain D1096_RS00865 PF03458 UPF0126 domain D1096_RS00870 PF03116 NQR2, RnfD, RnfE family D1096_RS00875 PF04205 FMN-binding domain D1096_RS00880 PF02508 Rnf-Nqr subunit, membrane protein D1096_RS00885 PF03279 Bacterial lipid A biosynthesis acyltransferase D1096_RS00900 PF01258 Prokaryotic dksA/traR C4-type zinc finger D1096_RS00905 PF12627 Probable RNA and SrmB- binding site of polymerase A D1096_RS00905 PF12626 Polymerase A arginine-rich C-terminus D1096_RS00905 PF01743 Poly A polymerase head domain D1096_RS00910 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) D1096_RS00920 PF11739 Dicarboxylate transport D1096_RS00930 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D1096_RS00935 PF00929 Exonuclease D1096_RS00945 PF01817 Chorismate mutase type II D1096_RS00945 PF02153 Prephenate dehydrogenase D1096_RS00950 PF00793 DAHP synthetase I family D1096_RS00955 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D1096_RS00960 PF00224 Pyruvate kinase, barrel domain D1096_RS00960 PF02887 Pyruvate kinase, alpha/beta domain D1096_RS00965 PF00300 Histidine phosphatase superfamily (branch 1) D1096_RS00970 PF01207 Dihydrouridine synthase (Dus) D1096_RS00975 PF02954 Bacterial regulatory protein, Fis family D1096_RS00980 PF00209 Sodium:neurotransmitter symporter family D1096_RS00985 PF02086 D12 class N6 adenine-specific DNA methyltransferase D1096_RS00990 PF01761 3-dehydroquinate synthase D1096_RS00995 PF01202 Shikimate kinase D1096_RS01000 PF17092 Penicillin-binding protein OB-like domain D1096_RS01000 PF00912 Transglycosylase D1096_RS01000 PF00905 Penicillin binding protein transpeptidase domain D1096_RS01005 PF11104 Type IV pilus assembly protein PilM; D1096_RS01025 PF00263 Bacterial type II and III secretion system protein D1096_RS01025 PF03958 Bacterial type II/III secretion system short domain D1096_RS01030 PF01029 NusB family D1096_RS01035 PF00586 AIR synthase related protein, N-terminal domain D1096_RS01035 PF02769 AIR synthase related protein, C-terminal domain D1096_RS01040 PF04608 Phosphatidylglycerophosphatase A D1096_RS01045 PF01810 LysE type translocator D1096_RS01050 PF00588 SpoU rRNA Methylase family D1096_RS01050 PF08032 RNA 2'-O ribose methyltransferase substrate binding D1096_RS01055 PF00459 Inositol monophosphatase family D1096_RS01060 PF13292 1-deoxy-D-xylulose-5-phosphate synthase D1096_RS01060 PF02779 Transketolase, pyrimidine binding domain D1096_RS01060 PF02780 Transketolase, C-terminal domain D1096_RS01070 PF00464 Serine hydroxymethyltransferase D1096_RS01075 PF01513 ATP-NAD kinase D1096_RS01080 PF18019 HD domain D1096_RS01085 PF01867 CRISPR associated protein Cas1 D1096_RS01095 PF09615 CRISPR-associated protein (Cas_Csy3) D1096_RS01100 PF09614 CRISPR-associated protein (Cas_Csy2) D1096_RS01110 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D1096_RS01110 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D1096_RS01110 PF03129 Anticodon binding domain D1096_RS01110 PF02824 TGS domain D1096_RS01115 PF03783 Curli production assembly/transport component CsgG D1096_RS01125 PF05643 Putative bacterial lipoprotein (DUF799) D1096_RS01130 PF00707 Translation initiation factor IF-3, C-terminal domain D1096_RS01130 PF05198 Translation initiation factor IF-3, N-terminal domain D1096_RS01135 PF01632 Ribosomal protein L35 D1096_RS01140 PF00453 Ribosomal protein L20 D1096_RS01160 PF01595 Cyclin M transmembrane N-terminal domain D1096_RS01160 PF00571 CBS domain D1096_RS01160 PF03471 Transporter associated domain D1096_RS01165 PF00849 RNA pseudouridylate synthase D1096_RS01170 PF00300 Histidine phosphatase superfamily (branch 1) D1096_RS01175 PF03652 Holliday junction resolvase D1096_RS01180 PF02622 Uncharacterized ACR, COG1678 D1096_RS01185 PF04452 RNA methyltransferase D1096_RS01195 PF01722 BolA-like protein D1096_RS01220 PF07517 SecA DEAD-like domain D1096_RS01220 PF01043 SecA preprotein cross-linking domain D1096_RS01220 PF02810 SEC-C motif D1096_RS01220 PF07516 SecA Wing and Scaffold domain D1096_RS01230 PF00293 NUDIX domain D1096_RS01235 PF01118 Semialdehyde dehydrogenase, NAD binding domain D1096_RS01240 PF00696 Amino acid kinase family D1096_RS01245 PF00202 Aminotransferase class-III D1096_RS01250 PF17484 N-Lobe handle Tf-binding protein B D1096_RS01250 PF01298 C-lobe and N-lobe beta barrels of Tf-binding protein B D1096_RS01250 PF17483 C-lobe handle domain of Tf-binding protein B D1096_RS01255 PF07715 TonB-dependent Receptor Plug Domain D1096_RS01255 PF00593 TonB dependent receptor D1096_RS01260 PF07715 TonB-dependent Receptor Plug Domain D1096_RS01260 PF00593 TonB dependent receptor D1096_RS01265 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D1096_RS01265 PF07498 Rho termination factor, N-terminal domain D1096_RS01265 PF07497 Rho termination factor, RNA-binding domain D1096_RS01270 PF00291 Pyridoxal-phosphate dependent enzyme D1096_RS01275 PF00288 GHMP kinases N terminal domain D1096_RS01275 PF08544 GHMP kinases C terminal D1096_RS01280 PF00696 Amino acid kinase family D1096_RS01280 PF01842 ACT domain D1096_RS01280 PF13840 ACT domain D1096_RS01280 PF00742 Homoserine dehydrogenase D1096_RS01280 PF03447 Homoserine dehydrogenase, NAD binding domain D1096_RS01285 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain D1096_RS01285 PF02777 Iron/manganese superoxide dismutases, C-terminal domain D1096_RS01290 PF00842 Alanine racemase, C-terminal domain D1096_RS01290 PF01168 Alanine racemase, N-terminal domain D1096_RS01295 PF13538 UvrD-like helicase C-terminal domain D1096_RS01325 PF07687 Peptidase dimerisation domain D1096_RS01325 PF01546 Peptidase family M20/M25/M40 D1096_RS01330 PF00156 Phosphoribosyl transferase domain D1096_RS01335 PF00625 Guanylate kinase D1096_RS01340 PF02321 Outer membrane efflux protein D1096_RS01345 PF03658 RnfH family Ubiquitin D1096_RS01350 PF03364 Polyketide cyclase / dehydrase and lipid transport D1096_RS01355 PF03459 TOBE domain D1096_RS01355 PF00005 ABC transporter D1096_RS01360 PF00528 Binding-protein-dependent transport system inner membrane component D1096_RS01370 PF01061 ABC-2 type transporter D1096_RS01375 PF00005 ABC transporter D1096_RS01380 PF12169 DNA polymerase III subunits gamma and tau domain III D1096_RS01380 PF12170 DNA polymerase III tau subunit V interacting with alpha D1096_RS01385 PF00156 Phosphoribosyl transferase domain D1096_RS01400 PF01042 Endoribonuclease L-PSP D1096_RS01405 PF00291 Pyridoxal-phosphate dependent enzyme D1096_RS01410 PF04073 Aminoacyl-tRNA editing domain D1096_RS01415 PF00005 ABC transporter D1096_RS01420 PF01297 Zinc-uptake complex component A periplasmic D1096_RS01425 PF04358 DsrC like protein D1096_RS01430 PF01027 Inhibitor of apoptosis-promoting Bax1 D1096_RS01435 PF01066 CDP-alcohol phosphatidyltransferase D1096_RS01445 PF08459 UvrC Helix-hairpin-helix N-terminal D1096_RS01445 PF01541 GIY-YIG catalytic domain D1096_RS01445 PF02151 UvrB/uvrC motif D1096_RS01450 PF01026 TatD related DNase D1096_RS01455 PF00580 UvrD/REP helicase N-terminal domain D1096_RS01455 PF13361 UvrD-like helicase C-terminal domain D1096_RS01460 PF00005 ABC transporter D1096_RS01460 PF08402 TOBE domain D1096_RS01465 PF00528 Binding-protein-dependent transport system inner membrane component D1096_RS01470 PF00528 Binding-protein-dependent transport system inner membrane component D1096_RS01475 PF07499 RuvA, C-terminal domain D1096_RS01475 PF01330 RuvA N terminal domain D1096_RS01480 PF17864 RuvB AAA lid domain D1096_RS01480 PF05491 RuvB C-terminal winged helix domain D1096_RS01480 PF05496 Holliday junction DNA helicase RuvB P-loop domain D1096_RS01490 PF00521 DNA gyrase/topoisomerase IV, subunit A D1096_RS01490 PF03989 DNA gyrase C-terminal domain, beta-propeller D1096_RS01495 PF12161 HsdM N-terminal domain D1096_RS01495 PF02384 N-6 DNA Methylase D1096_RS01510 PF01420 Type I restriction modification DNA specificity domain D1096_RS01520 PF18766 SWI2/SNF2 ATPase D1096_RS01520 PF12008 Type I restriction and modification enzyme - subunit R C terminal D1096_RS01520 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) D1096_RS01525 PF00005 ABC transporter D1096_RS01525 PF16326 ABC transporter C-terminal domain D1096_RS01525 PF12848 ABC transporter D1096_RS01530 PF00899 ThiF family D1096_RS01535 PF17274 Family of unknown function (DUF5339) D1096_RS01540 PF01654 Cytochrome bd terminal oxidase subunit I D1096_RS01545 PF02322 Cytochrome bd terminal oxidase subunit II D1096_RS01560 PF03061 Thioesterase superfamily D1096_RS01565 PF01618 MotA/TolQ/ExbB proton channel family D1096_RS01570 PF02472 Biopolymer transport protein ExbD/TolR D1096_RS01575 PF06519 TolA C-terminal D1096_RS01575 PF06519 TolA C-terminal D1096_RS01580 PF07676 WD40-like Beta Propeller Repeat D1096_RS01580 PF04052 TolB amino-terminal domain D1096_RS01585 PF00691 OmpA family D1096_RS01595 PF00226 DnaJ domain D1096_RS01595 PF05099 Tellurite resistance protein TerB D1096_RS01600 PF01207 Dihydrouridine synthase (Dus) D1096_RS01605 PF05128 Domain of unknown function (DUF697) D1096_RS01610 PF00005 ABC transporter D1096_RS01610 PF12848 ABC transporter D1096_RS01620 PF00994 Probable molybdopterin binding domain D1096_RS01620 PF03454 MoeA C-terminal region (domain IV) D1096_RS01620 PF03453 MoeA N-terminal region (domain I and II) D1096_RS01625 PF00899 ThiF family D1096_RS01635 PF01938 TRAM domain D1096_RS01635 PF05958 tRNA (Uracil-5-)-methyltransferase D1096_RS01640 PF13286 Phosphohydrolase-associated domain D1096_RS01640 PF01966 HD domain D1096_RS01645 PF00271 Helicase conserved C-terminal domain D1096_RS01645 PF18339 RapA N-terminal Tudor like domain 1 D1096_RS01645 PF18337 RapA N-terminal Tudor like domain D1096_RS01645 PF12137 RNA polymerase recycling family C-terminal D1096_RS01645 PF00176 SNF2 family N-terminal domain D1096_RS01650 PF00849 RNA pseudouridylate synthase D1096_RS01655 PF01510 N-acetylmuramoyl-L-alanine amidase D1096_RS01660 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ D1096_RS01665 PF00156 Phosphoribosyl transferase domain D1096_RS01670 PF01717 Cobalamin-independent synthase, Catalytic domain D1096_RS01675 PF01053 Cys/Met metabolism PLP-dependent enzyme D1096_RS01680 PF02600 Disulfide bond formation protein DsbB D1096_RS01685 PF06450 Bacterial Na+/H+ antiporter B (NhaB) D1096_RS01690 PF07840 FadR C-terminal domain D1096_RS01690 PF00392 Bacterial regulatory proteins, gntR family D1096_RS01695 PF02562 PhoH-like protein D1096_RS01715 PF00293 NUDIX domain D1096_RS01720 PF01494 FAD binding domain D1096_RS01740 PF01494 FAD binding domain D1096_RS01745 PF03668 P-loop ATPase protein family D1096_RS01750 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D1096_RS01755 PF00005 ABC transporter D1096_RS01755 PF12399 Branched-chain amino acid ATP-binding cassette transporter D1096_RS01760 PF03968 OstA-like protein D1096_RS01770 PF00311 Phosphoenolpyruvate carboxylase D1096_RS01775 PF04536 TPM domain D1096_RS01785 PF04011 LemA family D1096_RS01790 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D1096_RS01795 PF00294 pfkB family carbohydrate kinase D1096_RS01800 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D1096_RS01800 PF00381 PTS HPr component phosphorylation site D1096_RS01805 PF02806 Alpha amylase, C-terminal all-beta domain D1096_RS01805 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D1096_RS01805 PF00128 Alpha amylase, catalytic domain D1096_RS01810 PF00128 Alpha amylase, catalytic domain D1096_RS01810 PF18390 Glycogen debranching enzyme C-terminal domain D1096_RS01810 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D1096_RS01815 PF00483 Nucleotidyl transferase D1096_RS01820 PF08323 Starch synthase catalytic domain D1096_RS01820 PF00534 Glycosyl transferases group 1 D1096_RS01825 PF00343 Carbohydrate phosphorylase D1096_RS01830 PF00334 Nucleoside diphosphate kinase D1096_RS01835 PF09334 tRNA synthetases class I (M) D1096_RS01835 PF01588 Putative tRNA binding domain D1096_RS01835 PF08264 Anticodon-binding domain of tRNA D1096_RS01840 PF13378 Enolase C-terminal domain-like D1096_RS01850 PF00849 RNA pseudouridylate synthase D1096_RS01850 PF01479 S4 domain D1096_RS01855 PF07690 Major Facilitator Superfamily D1096_RS01870 PF01261 Xylose isomerase-like TIM barrel D1096_RS01875 PF00877 NlpC/P60 family D1096_RS01880 PF00717 Peptidase S24-like D1096_RS01885 PF01228 Glycine radical D1096_RS01890 PF03167 Uracil DNA glycosylase superfamily D1096_RS01895 PF04393 Protein of unknown function (DUF535) D1096_RS01900 PF00082 Subtilase family D1096_RS01900 PF03797 Autotransporter beta-domain D1096_RS01905 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold D1096_RS01905 PF00271 Helicase conserved C-terminal domain D1096_RS01905 PF11898 Domain of unknown function (DUF3418) D1096_RS01905 PF04408 Helicase associated domain (HA2) D1096_RS01905 PF00270 DEAD/DEAH box helicase D1096_RS01910 PF04284 Protein of unknown function (DUF441) D1096_RS01915 PF01025 GrpE D1096_RS01920 PF13416 Bacterial extracellular solute-binding protein D1096_RS01925 PF01554 MatE D1096_RS01930 PF12705 PD-(D/E)XK nuclease superfamily D1096_RS01930 PF00580 UvrD/REP helicase N-terminal domain D1096_RS01930 PF13361 UvrD-like helicase C-terminal domain D1096_RS01935 PF00795 Carbon-nitrogen hydrolase D1096_RS01940 PF03471 Transporter associated domain D1096_RS01940 PF00571 CBS domain D1096_RS01945 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) D1096_RS01950 PF00230 Major intrinsic protein D1096_RS01955 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D1096_RS01955 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D1096_RS01960 PF00004 ATPase family associated with various cellular activities (AAA) D1096_RS01960 PF02190 ATP-dependent protease La (LON) substrate-binding domain D1096_RS01960 PF05362 Lon protease (S16) C-terminal proteolytic domain D1096_RS01965 PF07690 Major Facilitator Superfamily D1096_RS01970 PF03009 Glycerophosphoryl diester phosphodiesterase family D1096_RS01975 PF01266 FAD dependent oxidoreductase D1096_RS01975 PF04324 BFD-like [2Fe-2S] binding domain D1096_RS01980 PF00890 FAD binding domain D1096_RS01985 PF02754 Cysteine-rich domain D1096_RS01985 PF13183 4Fe-4S dicluster domain D1096_RS01990 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D1096_RS01990 PF01872 RibD C-terminal domain D1096_RS01995 PF00677 Lumazine binding domain D1096_RS02000 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase D1096_RS02000 PF00925 GTP cyclohydrolase II D1096_RS02005 PF00885 6,7-dimethyl-8-ribityllumazine synthase D1096_RS02015 PF03449 Transcription elongation factor, N-terminal D1096_RS02015 PF01272 Transcription elongation factor, GreA/GreB, C-term D1096_RS02020 PF01380 SIS domain D1096_RS02020 PF00571 CBS domain D1096_RS02025 PF12404 Peptidase D1096_RS02025 PF00883 Cytosol aminopeptidase family, catalytic domain D1096_RS02030 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) D1096_RS02035 PF01758 Sodium Bile acid symporter family D1096_RS02040 PF13533 Biotin-lipoyl like D1096_RS02050 PF00682 HMGL-like D1096_RS02050 PF08502 LeuA allosteric (dimerisation) domain D1096_RS02055 PF04542 Sigma-70 region 2 D1096_RS02055 PF08281 Sigma-70, region 4 D1096_RS02060 PF03873 Anti sigma-E protein RseA, C-terminal domain D1096_RS02060 PF03872 Anti sigma-E protein RseA, N-terminal domain D1096_RS02070 PF13193 AMP-binding enzyme C-terminal domain D1096_RS02070 PF00501 AMP-binding enzyme D1096_RS02080 PF00398 Ribosomal RNA adenine dimethylase D1096_RS02085 PF00639 PPIC-type PPIASE domain D1096_RS02085 PF09312 SurA N-terminal domain D1096_RS02090 PF00156 Phosphoribosyl transferase domain D1096_RS02095 PF00294 pfkB family carbohydrate kinase D1096_RS02095 PF01467 Cytidylyltransferase-like D1096_RS02100 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal D1096_RS02100 PF01926 50S ribosome-binding GTPase D1096_RS02105 PF01488 Shikimate / quinate 5-dehydrogenase D1096_RS02105 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain D1096_RS02105 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain D1096_RS02110 PF13291 ACT domain D1096_RS02110 PF04607 Region found in RelA / SpoT proteins D1096_RS02110 PF02824 TGS domain D1096_RS02115 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain D1096_RS02115 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase D1096_RS02115 PF13288 DXP reductoisomerase C-terminal domain D1096_RS02125 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 D1096_RS02125 PF00132 Bacterial transferase hexapeptide (six repeats) D1096_RS02130 PF07977 FabA-like domain D1096_RS02135 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD D1096_RS02135 PF00132 Bacterial transferase hexapeptide (six repeats) D1096_RS02145 PF01103 Surface antigen D1096_RS02145 PF07244 Surface antigen variable number repeat D1096_RS02160 PF01255 Putative undecaprenyl diphosphate synthase D1096_RS02165 PF16123 Hydroxyacylglutathione hydrolase C-terminus D1096_RS02165 PF00753 Metallo-beta-lactamase superfamily D1096_RS02170 PF00480 ROK family D1096_RS02175 PF01569 PAP2 superfamily D1096_RS02180 PF01985 CRS1 / YhbY (CRM) domain D1096_RS02185 PF00535 Glycosyl transferase family 2 D1096_RS02190 PF00768 D-alanyl-D-alanine carboxypeptidase D1096_RS02195 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D1096_RS02200 PF00764 Arginosuccinate synthase D1096_RS02205 PF00075 RNase H D1096_RS02210 PF02674 Colicin V production protein D1096_RS02215 PF00156 Phosphoribosyl transferase domain D1096_RS02225 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase D1096_RS02225 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain D1096_RS02230 PF04355 SmpA / OmlA family D1096_RS02235 PF04245 37-kD nucleoid-associated bacterial protein D1096_RS02240 PF01042 Endoribonuclease L-PSP D1096_RS02245 PF02578 Multi-copper polyphenol oxidoreductase laccase D1096_RS02255 PF07119 Protein of unknown function (DUF1375) D1096_RS02260 PF00180 Isocitrate/isopropylmalate dehydrogenase D1096_RS02265 PF01641 SelR domain D1096_RS02270 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D1096_RS02270 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D1096_RS02280 PF04085 rod shape-determining protein MreC D1096_RS02285 PF04093 rod shape-determining protein MreD D1096_RS02290 PF00004 ATPase family associated with various cellular activities (AAA) D1096_RS02290 PF16193 AAA C-terminal domain D1096_RS02290 PF12002 MgsA AAA+ ATPase C terminal D1096_RS02295 PF00950 ABC 3 transport family D1096_RS02300 PF13230 Glutamine amidotransferases class-II D1096_RS02305 PF00561 alpha/beta hydrolase fold D1096_RS02310 PF02698 DUF218 domain D1096_RS02315 PF05662 Coiled stalk of trimeric autotransporter adhesin D1096_RS02315 PF03895 YadA-like membrane anchor domain D1096_RS02315 PF15401 Tryptophan-ring motif of head of Trimeric autotransporter adhesin D1096_RS02315 PF13018 Extended Signal Peptide of Type V secretion system D1096_RS02320 PF02589 LUD domain D1096_RS02325 PF11870 Domain of unknown function (DUF3390) D1096_RS02325 PF13183 4Fe-4S dicluster domain D1096_RS02325 PF02589 LUD domain D1096_RS02330 PF02754 Cysteine-rich domain D1096_RS02335 PF02652 L-lactate permease D1096_RS02340 PF00816 H-NS histone family D1096_RS02345 PF03553 Na+/H+ antiporter family D1096_RS02350 PF13407 Periplasmic binding protein domain D1096_RS02355 PF02629 CoA binding domain D1096_RS02355 PF00549 CoA-ligase D1096_RS02360 PF08442 ATP-grasp domain D1096_RS02360 PF00549 CoA-ligase D1096_RS02365 PF04393 Protein of unknown function (DUF535) D1096_RS02370 PF02817 e3 binding domain D1096_RS02370 PF00364 Biotin-requiring enzyme D1096_RS02370 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D1096_RS02375 PF02779 Transketolase, pyrimidine binding domain D1096_RS02375 PF16870 2-oxoglutarate dehydrogenase C-terminal D1096_RS02375 PF00676 Dehydrogenase E1 component D1096_RS02375 PF16078 2-oxoglutarate dehydrogenase N-terminus D1096_RS02380 PF00005 ABC transporter D1096_RS02385 PF01551 Peptidase family M23 D1096_RS02385 PF04225 Opacity-associated protein A LysM-like domain D1096_RS02390 PF13098 Thioredoxin-like domain D1096_RS02390 PF10411 Disulfide bond isomerase protein N-terminus D1096_RS02395 PF17768 RecJ OB domain D1096_RS02395 PF02272 DHHA1 domain D1096_RS02395 PF01368 DHH family D1096_RS02400 PF00691 OmpA family D1096_RS02400 PF01389 OmpA-like transmembrane domain D1096_RS02410 PF07730 Histidine kinase D1096_RS02410 PF00672 HAMP domain D1096_RS02410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1096_RS02410 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term D1096_RS02420 PF01725 Ham1 family D1096_RS02425 PF01906 Putative heavy-metal-binding D1096_RS02430 PF01268 Formate--tetrahydrofolate ligase D1096_RS02435 PF03692 Putative zinc- or iron-chelating domain D1096_RS02440 PF00106 short chain dehydrogenase D1096_RS02445 PF00291 Pyridoxal-phosphate dependent enzyme D1096_RS02450 PF00290 Tryptophan synthase alpha chain D1096_RS02455 PF12441 CopG antitoxin of type II toxin-antitoxin system D1096_RS02465 PF00476 DNA polymerase family A D1096_RS02465 PF01612 3'-5' exonuclease D1096_RS02465 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain D1096_RS02465 PF01367 5'-3' exonuclease, C-terminal SAM fold D1096_RS02480 PF03548 Outer membrane lipoprotein carrier protein LolA D1096_RS02485 PF01371 Trp repressor protein D1096_RS02490 PF00912 Transglycosylase D1096_RS02495 PF02627 Carboxymuconolactone decarboxylase family D1096_RS02525 PF00881 Nitroreductase family D1096_RS02530 PF08443 RimK-like ATP-grasp domain D1096_RS02530 PF18030 RimK PreATP-grasp domain D1096_RS02535 PF02698 DUF218 domain D1096_RS02540 PF01515 Phosphate acetyl/butaryl transferase D1096_RS02540 PF03949 Malic enzyme, NAD binding domain D1096_RS02540 PF00390 Malic enzyme, N-terminal domain D1096_RS02545 PF01386 Ribosomal L25p family D1096_RS02555 PF06226 Protein of unknown function (DUF1007) D1096_RS02560 PF03824 High-affinity nickel-transport protein D1096_RS02565 PF01235 Sodium:alanine symporter family D1096_RS02580 PF02597 ThiS family D1096_RS02590 PF06968 Biotin and Thiamin Synthesis associated domain D1096_RS02590 PF04055 Radical SAM superfamily D1096_RS02595 PF03070 TENA/THI-4/PQQC family D1096_RS02615 PF06421 GTP-binding protein LepA C-terminus D1096_RS02615 PF03144 Elongation factor Tu domain 2 D1096_RS02615 PF00679 Elongation factor G C-terminus D1096_RS02615 PF00009 Elongation factor Tu GTP binding domain D1096_RS02620 PF10502 Signal peptidase, peptidase S26 D1096_RS02625 PF00035 Double-stranded RNA binding motif D1096_RS02625 PF14622 Ribonuclease-III-like D1096_RS02630 PF07650 KH domain D1096_RS02630 PF01926 50S ribosome-binding GTPase D1096_RS02635 PF02565 Recombination protein O C terminal D1096_RS02635 PF11967 Recombination protein O N terminal D1096_RS02660 PF05872 Bacterial protein of unknown function (DUF853) D1096_RS02670 PF00528 Binding-protein-dependent transport system inner membrane component D1096_RS02685 PF00318 Ribosomal protein S2 D1096_RS02690 PF00889 Elongation factor TS D1096_RS02695 PF00884 Sulfatase D1096_RS02700 PF00696 Amino acid kinase family D1096_RS02705 PF01765 Ribosome recycling factor D1096_RS02710 PF00155 Aminotransferase class I and II D1096_RS02710 PF00392 Bacterial regulatory proteins, gntR family D1096_RS02715 PF01680 SOR/SNZ family D1096_RS02720 PF01174 SNO glutamine amidotransferase family D1096_RS02725 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D1096_RS02730 PF03880 DbpA RNA binding domain D1096_RS02730 PF00271 Helicase conserved C-terminal domain D1096_RS02730 PF00270 DEAD/DEAH box helicase D1096_RS02740 PF00575 S1 RNA binding domain D1096_RS02740 PF01138 3' exoribonuclease family, domain 1 D1096_RS02740 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain D1096_RS02740 PF00013 KH domain D1096_RS02740 PF03725 3' exoribonuclease family, domain 2 D1096_RS02745 PF03989 DNA gyrase C-terminal domain, beta-propeller D1096_RS02745 PF00521 DNA gyrase/topoisomerase IV, subunit A D1096_RS02750 PF17192 MukF middle domain D1096_RS02750 PF03882 MukF winged-helix domain D1096_RS02750 PF17193 MukF C-terminal domain D1096_RS02755 PF04288 MukE-like family D1096_RS02760 PF04310 MukB N-terminal D1096_RS02760 PF16330 MukB hinge domain D1096_RS02765 PF07690 Major Facilitator Superfamily D1096_RS02770 PF11893 Domain of unknown function (DUF3413) D1096_RS02770 PF00884 Sulfatase D1096_RS02775 PF07208 Protein of unknown function (DUF1414) D1096_RS02780 PF00440 Bacterial regulatory proteins, tetR family D1096_RS02785 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D1096_RS02790 PF00873 AcrB/AcrD/AcrF family D1096_RS02795 PF12804 MobA-like NTP transferase domain D1096_RS02795 PF00132 Bacterial transferase hexapeptide (six repeats) D1096_RS02805 PF08942 Domain of unknown function (DUF1919) D1096_RS02810 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D1096_RS02810 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D1096_RS02810 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D1096_RS02810 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D1096_RS02815 PF02540 NAD synthase D1096_RS02815 PF00958 GMP synthase C terminal domain D1096_RS02815 PF00117 Glutamine amidotransferase class-I D1096_RS02825 PF00478 IMP dehydrogenase / GMP reductase domain D1096_RS02825 PF00571 CBS domain D1096_RS02830 PF01728 FtsJ-like methyltransferase D1096_RS02835 PF06480 FtsH Extracellular D1096_RS02835 PF01434 Peptidase family M41 D1096_RS02835 PF17862 AAA+ lid domain D1096_RS02835 PF00004 ATPase family associated with various cellular activities (AAA) D1096_RS02840 PF03222 Tryptophan/tyrosine permease family D1096_RS02845 PF03222 Tryptophan/tyrosine permease family D1096_RS02850 PF08335 GlnD PII-uridylyltransferase D1096_RS02850 PF01966 HD domain D1096_RS02855 PF06295 Protein of unknown function (DUF1043) D1096_RS02860 PF00572 Ribosomal protein L13 D1096_RS02865 PF00380 Ribosomal protein S9/S16 D1096_RS02870 PF03883 Peroxide stress protein YaaA D1096_RS02880 PF16916 Dimerisation domain of Zinc Transporter D1096_RS02880 PF01545 Cation efflux family D1096_RS02885 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) D1096_RS02890 PF00375 Sodium:dicarboxylate symporter family D1096_RS02895 PF00881 Nitroreductase family D1096_RS02900 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain D1096_RS02900 PF01409 tRNA synthetases class II core domain (F) D1096_RS02905 PF03483 B3/4 domain D1096_RS02905 PF03484 tRNA synthetase B5 domain D1096_RS02905 PF03147 Ferredoxin-fold anticodon binding domain D1096_RS02905 PF01588 Putative tRNA binding domain D1096_RS02905 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain D1096_RS02910 PF00216 Bacterial DNA-binding protein D1096_RS02915 PF00877 NlpC/P60 family D1096_RS02930 PF01047 MarR family D1096_RS02930 PF00480 ROK family D1096_RS02935 PF00570 HRDC domain D1096_RS02935 PF01612 3'-5' exonuclease D1096_RS02940 PF01037 Lrp/AsnC ligand binding domain D1096_RS02945 PF09397 Ftsk gamma domain D1096_RS02945 PF17854 FtsK alpha domain D1096_RS02945 PF13491 4TM region of DNA translocase FtsK/SpoIIIE D1096_RS02945 PF01580 FtsK/SpoIIIE family D1096_RS02950 PF04228 Putative neutral zinc metallopeptidase D1096_RS02955 PF00793 DAHP synthetase I family D1096_RS02960 PF00814 Glycoprotease family D1096_RS02965 PF00265 Thymidine kinase D1096_RS02970 PF06005 Cell division protein ZapB D1096_RS02975 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded D1096_RS02980 PF01784 NIF3 (NGG1p interacting factor 3) D1096_RS02985 PF12704 MacB-like periplasmic core domain D1096_RS02985 PF02687 FtsX-like permease family D1096_RS02985 PF00005 ABC transporter D1096_RS02990 PF00512 His Kinase A (phospho-acceptor) domain D1096_RS02990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1096_RS02990 PF00672 HAMP domain D1096_RS02990 PF16527 Two-component sensor protein CpxA, periplasmic domain D1096_RS02995 PF00072 Response regulator receiver domain D1096_RS02995 PF00486 Transcriptional regulatory protein, C terminal D1096_RS03000 PF03819 MazG nucleotide pyrophosphohydrolase domain D1096_RS03005 PF17848 Acetyl-coA carboxylase zinc finger domain D1096_RS03005 PF01039 Carboxyl transferase domain D1096_RS03010 PF08245 Mur ligase middle domain D1096_RS03020 PF02576 RimP N-terminal domain D1096_RS03020 PF17384 RimP C-terminal SH3 domain D1096_RS03025 PF13184 NusA-like KH domain D1096_RS03025 PF08529 NusA N-terminal domain D1096_RS03025 PF00575 S1 RNA binding domain D1096_RS03030 PF00009 Elongation factor Tu GTP binding domain D1096_RS03030 PF11987 Translation-initiation factor 2 D1096_RS03030 PF04760 Translation initiation factor IF-2, N-terminal region D1096_RS03035 PF02033 Ribosome-binding factor A D1096_RS03040 PF09157 Pseudouridine synthase II TruB, C-terminal D1096_RS03040 PF01509 TruB family pseudouridylate synthase (N terminal domain) D1096_RS03040 PF16198 tRNA pseudouridylate synthase B C-terminal domain D1096_RS03045 PF13406 Transglycosylase SLT domain D1096_RS03050 PF07411 Domain of unknown function (DUF1508) D1096_RS03055 PF07085 DRTGG domain D1096_RS03055 PF01515 Phosphate acetyl/butaryl transferase D1096_RS03060 PF00871 Acetokinase family D1096_RS03065 PF02872 5'-nucleotidase, C-terminal domain D1096_RS03065 PF00149 Calcineurin-like phosphoesterase D1096_RS03075 PF13609 Gram-negative porin D1096_RS03085 PF00483 Nucleotidyl transferase D1096_RS03090 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D1096_RS03090 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D1096_RS03090 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D1096_RS03090 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D1096_RS03095 PF02599 Global regulator protein family D1096_RS03100 PF02272 DHHA1 domain D1096_RS03100 PF01411 tRNA synthetases class II (A) D1096_RS03100 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D1096_RS03105 PF00582 Universal stress protein family D1096_RS03110 PF00325 Bacterial regulatory proteins, crp family D1096_RS03110 PF00027 Cyclic nucleotide-binding domain D1096_RS03115 PF04386 Stringent starvation protein B D1096_RS03120 PF00043 Glutathione S-transferase, C-terminal domain D1096_RS03120 PF02798 Glutathione S-transferase, N-terminal domain D1096_RS03125 PF00731 AIR carboxylase D1096_RS03130 PF17763 Glutaminase/Asparaginase C-terminal domain D1096_RS03130 PF00710 Asparaginase, N-terminal D1096_RS03135 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain D1096_RS03135 PF02222 ATP-grasp domain D1096_RS03140 PF00155 Aminotransferase class I and II D1096_RS03145 PF00557 Metallopeptidase family M24 D1096_RS03145 PF05195 Aminopeptidase P, N-terminal domain D1096_RS03150 PF04851 Type III restriction enzyme, res subunit D1096_RS03150 PF08774 VRR-NUC domain D1096_RS03155 PF01555 DNA methylase D1096_RS03155 PF18273 Type III R-M EcoP15I C-terminal domain D1096_RS03170 PF13635 Domain of unknown function (DUF4143) D1096_RS03170 PF13173 AAA domain D1096_RS03175 PF01850 PIN domain D1096_RS03190 PF17757 UvrB interaction domain D1096_RS03190 PF12344 Ultra-violet resistance protein B D1096_RS03190 PF02151 UvrB/uvrC motif D1096_RS03190 PF04851 Type III restriction enzyme, res subunit D1096_RS03190 PF00271 Helicase conserved C-terminal domain D1096_RS03195 PF09375 Imelysin D1096_RS03200 PF10518 TAT (twin-arginine translocation) pathway signal sequence D1096_RS03200 PF04261 Dyp-type peroxidase family D1096_RS03210 PF02811 PHP domain D1096_RS03220 PF00929 Exonuclease D1096_RS03220 PF08411 Exonuclease C-terminal D1096_RS03225 PF00654 Voltage gated chloride channel D1096_RS03230 PF00152 tRNA synthetases class II (D, K and N) D1096_RS03230 PF01336 OB-fold nucleic acid binding domain D1096_RS03235 PF04055 Radical SAM superfamily D1096_RS03245 PF01132 Elongation factor P (EF-P) OB domain D1096_RS03245 PF08207 Elongation factor P (EF-P) KOW-like domain D1096_RS03245 PF09285 Elongation factor P, C-terminal D1096_RS03250 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain D1096_RS03250 PF00749 tRNA synthetases class I (E and Q), catalytic domain D1096_RS03260 PF07690 Major Facilitator Superfamily D1096_RS03265 PF01464 Transglycosylase SLT domain D1096_RS03265 PF14718 Soluble lytic murein transglycosylase L domain D1096_RS03270 PF00156 Phosphoribosyl transferase domain D1096_RS03275 PF01053 Cys/Met metabolism PLP-dependent enzyme D1096_RS03280 PF05173 Dihydrodipicolinate reductase, C-terminus D1096_RS03280 PF01113 Dihydrodipicolinate reductase, N-terminus D1096_RS03295 PF01728 FtsJ-like methyltransferase D1096_RS03295 PF18125 RlmM ferredoxin-like domain D1096_RS03300 PF04241 Protein of unknown function (DUF423) D1096_RS03305 PF01565 FAD binding domain D1096_RS03305 PF09330 D-lactate dehydrogenase, membrane binding D1096_RS03310 PF01568 Molydopterin dinucleotide binding domain D1096_RS03310 PF18364 Molybdopterin oxidoreductase N-terminal domain D1096_RS03310 PF00384 Molybdopterin oxidoreductase D1096_RS03315 PF03264 NapC/NirT cytochrome c family, N-terminal region D1096_RS03320 PF04055 Radical SAM superfamily D1096_RS03320 PF06463 Molybdenum Cofactor Synthesis C D1096_RS03325 PF01967 MoaC family D1096_RS03330 PF02597 ThiS family D1096_RS03335 PF02391 MoaE protein D1096_RS03340 PF02130 Uncharacterized protein family UPF0054 D1096_RS03345 PF17176 tRNA-binding domain D1096_RS03345 PF05127 Helicase D1096_RS03345 PF13718 GNAT acetyltransferase 2 D1096_RS03350 PF01131 DNA topoisomerase D1096_RS03350 PF08272 Topoisomerase I zinc-ribbon-like D1096_RS03350 PF01751 Toprim domain D1096_RS03350 PF01396 Topoisomerase DNA binding C4 zinc finger D1096_RS03355 PF03466 LysR substrate binding domain D1096_RS03355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1096_RS03360 PF00583 Acetyltransferase (GNAT) family D1096_RS03360 PF00696 Amino acid kinase family D1096_RS03365 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D1096_RS03370 PF00155 Aminotransferase class I and II D1096_RS03375 PF01053 Cys/Met metabolism PLP-dependent enzyme D1096_RS03380 PF00266 Aminotransferase class-V D1096_RS03395 PF01555 DNA methylase D1096_RS03400 PF01380 SIS domain D1096_RS03400 PF01418 Helix-turn-helix domain, rpiR family D1096_RS03405 PF04074 YhcH/YjgK/YiaL D1096_RS03410 PF02541 Ppx/GppA phosphatase family D1096_RS03415 PF04363 Protein of unknown function (DUF496) D1096_RS03420 PF00696 Amino acid kinase family D1096_RS03420 PF01842 ACT domain D1096_RS03425 PF03477 ATP cone domain D1096_RS03430 PF05166 YcgL domain D1096_RS03435 PF00772 DnaB-like helicase N terminal domain D1096_RS03435 PF03796 DnaB-like helicase C terminal domain D1096_RS03440 PF01497 Periplasmic binding protein D1096_RS03445 PF01032 FecCD transport family D1096_RS03450 PF01032 FecCD transport family D1096_RS03455 PF00005 ABC transporter D1096_RS03460 PF01865 Protein of unknown function DUF47 D1096_RS03465 PF01384 Phosphate transporter family D1096_RS03470 PF08239 Bacterial SH3 domain D1096_RS03480 PF01814 Hemerythrin HHE cation binding domain D1096_RS03485 PF01702 Queuine tRNA-ribosyltransferase D1096_RS03495 PF00313 'Cold-shock' DNA-binding domain D1096_RS03500 PF00484 Carbonic anhydrase D1096_RS03505 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D1096_RS03505 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D1096_RS03505 PF00205 Thiamine pyrophosphate enzyme, central domain D1096_RS03510 PF10369 Small subunit of acetolactate synthase D1096_RS03515 PF01523 Putative modulator of DNA gyrase D1096_RS03520 PF04751 Protein of unknown function (DUF615) D1096_RS03525 PF04247 Invasion gene expression up-regulator, SirB D1096_RS03530 PF02441 Flavoprotein D1096_RS03535 PF04474 Protein of unknown function (DUF554) D1096_RS03545 PF01253 Translation initiation factor SUI1 D1096_RS03550 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family D1096_RS03555 PF18073 Rubredoxin metal binding domain D1096_RS03560 PF06305 Lipopolysaccharide assembly protein A domain D1096_RS03565 PF00216 Bacterial DNA-binding protein D1096_RS03570 PF00575 S1 RNA binding domain D1096_RS03575 PF02224 Cytidylate kinase D1096_RS03580 PF13180 PDZ domain D1096_RS03590 PF03840 Preprotein translocase SecG subunit D1096_RS03595 PF01751 Toprim domain D1096_RS03595 PF01131 DNA topoisomerase D1096_RS03600 PF00245 Alkaline phosphatase D1096_RS03605 PF03411 Penicillin-insensitive murein endopeptidase D1096_RS03610 PF01264 Chorismate synthase D1096_RS03615 PF12794 Mechanosensitive ion channel inner membrane domain 1 D1096_RS03615 PF12795 Mechanosensitive ion channel porin domain D1096_RS03615 PF00924 Mechanosensitive ion channel D1096_RS03620 PF12794 Mechanosensitive ion channel inner membrane domain 1 D1096_RS03620 PF12795 Mechanosensitive ion channel porin domain D1096_RS03620 PF00924 Mechanosensitive ion channel D1096_RS03625 PF00501 AMP-binding enzyme D1096_RS03630 PF03925 SeqA protein C-terminal domain D1096_RS03630 PF17206 SeqA protein N-terminal domain D1096_RS03635 PF00561 alpha/beta hydrolase fold D1096_RS03640 PF13649 Methyltransferase domain D1096_RS03660 PF00773 RNB domain D1096_RS03660 PF08206 Ribonuclease B OB domain D1096_RS03660 PF00575 S1 RNA binding domain D1096_RS03665 PF03788 LrgA family D1096_RS03670 PF04172 LrgB-like family D1096_RS03675 PF00149 Calcineurin-like phosphoesterase D1096_RS03685 PF03889 Alternative ribosome-rescue factor A D1096_RS03690 PF13649 Methyltransferase domain D1096_RS03695 PF01594 AI-2E family transporter D1096_RS03700 PF01933 Uncharacterised protein family UPF0052 D1096_RS03705 PF02547 Queuosine biosynthesis protein D1096_RS03710 PF03772 Competence protein D1096_RS03710 PF13567 Domain of unknown function (DUF4131) D1096_RS03710 PF00753 Metallo-beta-lactamase superfamily D1096_RS03715 PF00375 Sodium:dicarboxylate symporter family D1096_RS03720 PF01219 Prokaryotic diacylglycerol kinase D1096_RS03725 PF02872 5'-nucleotidase, C-terminal domain D1096_RS03725 PF00149 Calcineurin-like phosphoesterase D1096_RS03750 PF07992 Pyridine nucleotide-disulphide oxidoreductase D1096_RS03750 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D1096_RS03755 PF00364 Biotin-requiring enzyme D1096_RS03755 PF02817 e3 binding domain D1096_RS03755 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D1096_RS03760 PF00456 Transketolase, thiamine diphosphate binding domain D1096_RS03760 PF17831 Pyruvate dehydrogenase E1 component middle domain D1096_RS03765 PF01180 Dihydroorotate dehydrogenase D1096_RS03770 PF14572 Phosphoribosyl synthetase-associated domain D1096_RS03770 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase D1096_RS03775 PF00288 GHMP kinases N terminal domain D1096_RS03775 PF08544 GHMP kinases C terminal D1096_RS03780 PF03550 Outer membrane lipoprotein LolB D1096_RS03785 PF00005 ABC transporter D1096_RS03785 PF00664 ABC transporter transmembrane region D1096_RS03790 PF04172 LrgB-like family D1096_RS03800 PF06733 DEAD_2 D1096_RS03800 PF13307 Helicase C-terminal domain D1096_RS03810 PF17755 UvrA DNA-binding domain D1096_RS03810 PF17760 UvrA interaction domain D1096_RS03815 PF00436 Single-strand binding protein family D1096_RS03850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1096_RS03850 PF03466 LysR substrate binding domain D1096_RS03855 PF03060 Nitronate monooxygenase D1096_RS03870 PF07690 Major Facilitator Superfamily D1096_RS03875 PF04237 YjbR D1096_RS03880 PF00005 ABC transporter D1096_RS03880 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D1096_RS03885 PF00528 Binding-protein-dependent transport system inner membrane component D1096_RS03885 PF12911 N-terminal TM domain of oligopeptide transport permease C D1096_RS03890 PF00528 Binding-protein-dependent transport system inner membrane component D1096_RS03895 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D1096_RS03900 PF18024 Helix-turn-helix domain D1096_RS03900 PF00158 Sigma-54 interaction domain D1096_RS03905 PF13580 SIS domain D1096_RS03910 PF01293 Phosphoenolpyruvate carboxykinase D1096_RS03915 PF04977 Septum formation initiator D1096_RS03920 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase D1096_RS03925 PF02542 YgbB family D1096_RS03935 PF00884 Sulfatase D1096_RS03940 PF03476 MOSC N-terminal beta barrel domain D1096_RS03940 PF00111 2Fe-2S iron-sulfur cluster binding domain D1096_RS03940 PF03473 MOSC domain D1096_RS03945 PF02609 Exonuclease VII small subunit D1096_RS03950 PF00348 Polyprenyl synthetase D1096_RS03960 PF00152 tRNA synthetases class II (D, K and N) D1096_RS03960 PF01336 OB-fold nucleic acid binding domain D1096_RS03965 PF10150 Ribonuclease E/G family D1096_RS03965 PF00575 S1 RNA binding domain D1096_RS03970 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding D1096_RS03970 PF18381 YcaO cyclodehydratase C-terminal domain D1096_RS03975 PF08774 VRR-NUC domain D1096_RS03975 PF04851 Type III restriction enzyme, res subunit D1096_RS03980 PF01555 DNA methylase D1096_RS03980 PF18273 Type III R-M EcoP15I C-terminal domain D1096_RS03985 PF08003 Protein of unknown function (DUF1698) D1096_RS03995 PF06725 3D domain D1096_RS03995 PF03562 MltA specific insert domain D1096_RS04005 PF02601 Exonuclease VII, large subunit D1096_RS04005 PF13742 OB-fold nucleic acid binding domain D1096_RS04015 PF00576 HIUase/Transthyretin family D1096_RS04020 PF00356 Bacterial regulatory proteins, lacI family D1096_RS04020 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D1096_RS04025 PF09335 SNARE associated Golgi protein D1096_RS04030 PF01751 Toprim domain D1096_RS04030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1096_RS04030 PF18053 DNA gyrase B subunit insert domain D1096_RS04030 PF00986 DNA gyrase B subunit, carboxyl terminus D1096_RS04030 PF00204 DNA gyrase B D1096_RS04035 PF01040 UbiA prenyltransferase family D1096_RS04040 PF08220 DeoR-like helix-turn-helix domain D1096_RS04040 PF00455 DeoR C terminal sensor domain D1096_RS04045 PF00206 Lyase D1096_RS04045 PF08328 Adenylosuccinate lyase C-terminal D1096_RS04050 PF04356 Protein of unknown function (DUF489) D1096_RS04055 PF00005 ABC transporter D1096_RS04055 PF00664 ABC transporter transmembrane region D1096_RS04060 PF00005 ABC transporter D1096_RS04060 PF00664 ABC transporter transmembrane region D1096_RS04065 PF04357 TamB, inner membrane protein subunit of TAM complex D1096_RS04070 PF17243 POTRA domain TamA domain 1 D1096_RS04070 PF01103 Surface antigen D1096_RS04075 PF04748 Divergent polysaccharide deacetylase D1096_RS04080 PF01551 Peptidase family M23 D1096_RS04085 PF00300 Histidine phosphatase superfamily (branch 1) D1096_RS04090 PF01810 LysE type translocator D1096_RS04095 PF00485 Phosphoribulokinase / Uridine kinase family D1096_RS04100 PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) D1096_RS04105 PF00440 Bacterial regulatory proteins, tetR family D1096_RS04105 PF14278 Transcriptional regulator C-terminal region D1096_RS04110 PF13533 Biotin-lipoyl like D1096_RS04115 PF00005 ABC transporter D1096_RS04125 PF02321 Outer membrane efflux protein D1096_RS04130 PF02233 NAD(P) transhydrogenase beta subunit D1096_RS04135 PF05222 Alanine dehydrogenase/PNT, N-terminal domain D1096_RS04135 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch D1096_RS04135 PF01262 Alanine dehydrogenase/PNT, C-terminal domain D1096_RS04140 PF00588 SpoU rRNA Methylase family D1096_RS04155 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term D1096_RS04155 PF14489 QueF-like protein D1096_RS04165 PF00578 AhpC/TSA family D1096_RS04175 PF04055 Radical SAM superfamily D1096_RS04175 PF06969 HemN C-terminal domain D1096_RS04180 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D1096_RS04185 PF00528 Binding-protein-dependent transport system inner membrane component D1096_RS04190 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D1096_RS04190 PF00005 ABC transporter D1096_RS04195 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D1096_RS04195 PF00005 ABC transporter D1096_RS04200 PF02910 Fumarate reductase flavoprotein C-term D1096_RS04200 PF00890 FAD binding domain D1096_RS04205 PF01717 Cobalamin-independent synthase, Catalytic domain D1096_RS04210 PF02219 Methylenetetrahydrofolate reductase D1096_RS04215 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D1096_RS04220 PF03222 Tryptophan/tyrosine permease family D1096_RS04225 PF03315 Serine dehydratase beta chain D1096_RS04225 PF03313 Serine dehydratase alpha chain D1096_RS04230 PF01266 FAD dependent oxidoreductase D1096_RS04230 PF05430 S-adenosyl-L-methionine-dependent methyltransferase D1096_RS04235 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase D1096_RS04235 PF00218 Indole-3-glycerol phosphate synthase D1096_RS04240 PF12728 Helix-turn-helix domain D1096_RS04240 PF02661 Fic/DOC family D1096_RS04245 PF04287 tRNA pseudouridine synthase C D1096_RS04250 PF00849 RNA pseudouridylate synthase D1096_RS04255 PF03701 Uncharacterised protein family (UPF0181) D1096_RS04265 PF01928 CYTH domain D1096_RS04270 PF04317 YcjX-like family, DUF463 D1096_RS04275 PF01668 SmpB protein D1096_RS04280 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D1096_RS04280 PF02403 Seryl-tRNA synthetase N-terminal domain D1096_RS04285 PF01546 Peptidase family M20/M25/M40 D1096_RS04285 PF07687 Peptidase dimerisation domain D1096_RS04290 PF03606 C4-dicarboxylate anaerobic carrier D1096_RS04295 PF03575 Peptidase family S51 D1096_RS04300 PF00133 tRNA synthetases class I (I, L, M and V) D1096_RS04300 PF08264 Anticodon-binding domain of tRNA D1096_RS04300 PF13603 Leucyl-tRNA synthetase, Domain 2 D1096_RS04305 PF04390 Lipopolysaccharide-assembly D1096_RS04310 PF14840 Processivity clamp loader gamma complex DNA pol III C-term D1096_RS04310 PF06144 DNA polymerase III, delta subunit D1096_RS04315 PF03884 DNA gyrase inhibitor YacG D1096_RS04320 PF01121 Dephospho-CoA kinase D1096_RS04330 PF00482 Type II secretion system (T2SS), protein F D1096_RS04335 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain D1096_RS04335 PF00437 Type II/IV secretion system protein D1096_RS04340 PF07963 Prokaryotic N-terminal methylation motif D1096_RS04345 PF18073 Rubredoxin metal binding domain D1096_RS04355 PF00186 Dihydrofolate reductase D1096_RS04360 PF01472 PUA domain D1096_RS04360 PF00696 Amino acid kinase family D1096_RS04365 PF01925 Sulfite exporter TauE/SafE D1096_RS04370 PF00730 HhH-GPD superfamily base excision DNA repair protein D1096_RS04370 PF00633 Helix-hairpin-helix motif D1096_RS04370 PF10576 Iron-sulfur binding domain of endonuclease III D1096_RS04375 PF00108 Thiolase, N-terminal domain D1096_RS04375 PF02803 Thiolase, C-terminal domain D1096_RS04380 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D1096_RS04380 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D1096_RS04380 PF00378 Enoyl-CoA hydratase/isomerase D1096_RS04395 PF02634 FdhD/NarQ family D1096_RS04405 PF13247 4Fe-4S dicluster domain D1096_RS04405 PF09163 Formate dehydrogenase N, transmembrane D1096_RS04410 PF01292 Prokaryotic cytochrome b561 D1096_RS04415 PF04216 Protein involved in formate dehydrogenase formation D1096_RS04430 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain D1096_RS04430 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain D1096_RS04440 PF00701 Dihydrodipicolinate synthetase family D1096_RS04445 PF03279 Bacterial lipid A biosynthesis acyltransferase D1096_RS04450 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein D1096_RS04455 PF01416 tRNA pseudouridine synthase D1096_RS04460 PF01227 GTP cyclohydrolase I D1096_RS04475 PF12464 Maltose acetyltransferase D1096_RS04475 PF00132 Bacterial transferase hexapeptide (six repeats) D1096_RS04480 PF02129 X-Pro dipeptidyl-peptidase (S15 family) D1096_RS04485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1096_RS04485 PF03466 LysR substrate binding domain D1096_RS04490 PF03180 NLPA lipoprotein D1096_RS04495 PF03180 NLPA lipoprotein D1096_RS04500 PF00528 Binding-protein-dependent transport system inner membrane component D1096_RS04505 PF09383 NIL domain D1096_RS04505 PF00005 ABC transporter D1096_RS04510 PF01406 tRNA synthetases class I (C) catalytic domain D1096_RS04510 PF09190 DALR domain D1096_RS04515 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D1096_RS04520 PF12627 Probable RNA and SrmB- binding site of polymerase A D1096_RS04520 PF01743 Poly A polymerase head domain D1096_RS04520 PF01966 HD domain D1096_RS04530 PF07715 TonB-dependent Receptor Plug Domain D1096_RS04530 PF00593 TonB dependent receptor D1096_RS04545 PF04384 Iron-sulphur cluster assembly D1096_RS04550 PF00111 2Fe-2S iron-sulfur cluster binding domain D1096_RS04555 PF00012 Hsp70 protein D1096_RS04560 PF10946 Protein of unknown function DUF2625 D1096_RS04570 PF07743 HSCB C-terminal oligomerisation domain D1096_RS04575 PF01521 Iron-sulphur cluster biosynthesis D1096_RS04580 PF01592 NifU-like N terminal domain D1096_RS04585 PF00266 Aminotransferase class-V D1096_RS04590 PF02082 Transcriptional regulator D1096_RS04595 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) D1096_RS04600 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain D1096_RS04600 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain D1096_RS04605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1096_RS04605 PF00512 His Kinase A (phospho-acceptor) domain D1096_RS04605 PF18415 Histidine kinase receptor ArcB trans-membrane domain D1096_RS04605 PF01627 Hpt domain D1096_RS04605 PF00072 Response regulator receiver domain D1096_RS04605 PF00989 PAS fold D1096_RS04615 PF01713 Smr domain D1096_RS04625 PF08241 Methyltransferase domain D1096_RS04630 PF04301 Protein of unknown function (DUF452) D1096_RS04635 PF00155 Aminotransferase class I and II D1096_RS04640 PF00202 Aminotransferase class-III D1096_RS04645 PF05175 Methyltransferase small domain D1096_RS04650 PF03449 Transcription elongation factor, N-terminal D1096_RS04650 PF01272 Transcription elongation factor, GreA/GreB, C-term D1096_RS04655 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family D1096_RS04685 PF06114 IrrE N-terminal-like domain D1096_RS04690 PF01381 Helix-turn-helix D1096_RS04715 PF08339 RTX C-terminal domain D1096_RS04715 PF02382 N-terminal domain in RTX protein D1096_RS04715 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) D1096_RS04720 PF02794 RTX toxin acyltransferase family D1096_RS04725 PF17176 tRNA-binding domain D1096_RS04725 PF05127 Helicase D1096_RS04725 PF13718 GNAT acetyltransferase 2 D1096_RS04730 PF02130 Uncharacterized protein family UPF0054 D1096_RS04735 PF02142 MGS-like domain D1096_RS04735 PF01808 AICARFT/IMPCHase bienzyme D1096_RS04770 PF17287 POTRA domain D1096_RS04770 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB D1096_RS04770 PF08479 POTRA domain, ShlB-type D1096_RS04775 PF03968 OstA-like protein D1096_RS04775 PF04453 LPS transport system D D1096_RS04780 PF04055 Radical SAM superfamily D1096_RS04780 PF06969 HemN C-terminal domain D1096_RS04790 PF04220 Der GTPase activator (YihI) D1096_RS04795 PF02080 TrkA-C domain D1096_RS04795 PF06826 Predicted Permease Membrane Region D1096_RS04800 PF03616 Sodium/glutamate symporter D1096_RS04805 PF06062 Uncharacterised protein family (UPF0231) D1096_RS04810 PF03710 Glutamate-ammonia ligase adenylyltransferase D1096_RS04810 PF08335 GlnD PII-uridylyltransferase D1096_RS04815 PF03795 YCII-related domain D1096_RS04820 PF03061 Thioesterase superfamily D1096_RS04825 PF04279 Intracellular septation protein A D1096_RS04835 PF04217 Protein of unknown function, DUF412 D1096_RS04840 PF01171 PP-loop family D1096_RS04845 PF13726 Na+-H+ antiporter family D1096_RS04845 PF03553 Na+/H+ antiporter family D1096_RS04850 PF03372 Endonuclease/Exonuclease/phosphatase family D1096_RS04855 PF03466 LysR substrate binding domain D1096_RS04855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1096_RS04875 PF01197 Ribosomal protein L31 D1096_RS04880 PF00456 Transketolase, thiamine diphosphate binding domain D1096_RS04880 PF02780 Transketolase, C-terminal domain D1096_RS04880 PF02779 Transketolase, pyrimidine binding domain D1096_RS04885 PF00183 Hsp90 protein D1096_RS04885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1096_RS04890 PF06628 Catalase-related immune-responsive D1096_RS04890 PF00199 Catalase D1096_RS04905 PF00149 Calcineurin-like phosphoesterase D1096_RS04910 PF03477 ATP cone domain D1096_RS04910 PF02867 Ribonucleotide reductase, barrel domain D1096_RS04910 PF00317 Ribonucleotide reductase, all-alpha domain D1096_RS04915 PF00268 Ribonucleotide reductase, small chain D1096_RS04920 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain D1096_RS04920 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain D1096_RS04925 PF00288 GHMP kinases N terminal domain D1096_RS04925 PF08544 GHMP kinases C terminal D1096_RS04925 PF10509 Galactokinase galactose-binding signature D1096_RS04930 PF01263 Aldose 1-epimerase D1096_RS04935 PF02836 Glycosyl hydrolases family 2, TIM barrel domain D1096_RS04935 PF00703 Glycosyl hydrolases family 2 D1096_RS04935 PF16353 Domain of unknown function(DUF4981) D1096_RS04935 PF02929 Beta galactosidase small chain D1096_RS04935 PF02837 Glycosyl hydrolases family 2, sugar binding domain D1096_RS04940 PF06594 Haemolysin-type calcium binding protein related domain D1096_RS04940 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) D1096_RS04955 PF10609 NUBPL iron-transfer P-loop NTPase D1096_RS04965 PF01914 MarC family integral membrane protein D1096_RS04970 PF13145 PPIC-type PPIASE domain D1096_RS04975 PF00999 Sodium/hydrogen exchanger family D1096_RS04980 PF00312 Ribosomal protein S15 D1096_RS04985 PF05661 Protein of unknown function (DUF808) D1096_RS04990 PF07219 HemY protein N-terminus D1096_RS04995 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase D1096_RS05000 PF02602 Uroporphyrinogen-III synthase HemD D1096_RS05005 PF03900 Porphobilinogen deaminase, C-terminal domain D1096_RS05005 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain D1096_RS05010 PF00171 Aldehyde dehydrogenase family D1096_RS05010 PF00465 Iron-containing alcohol dehydrogenase D1096_RS05015 PF00118 TCP-1/cpn60 chaperonin family D1096_RS05020 PF00166 Chaperonin 10 Kd subunit D1096_RS05025 PF01048 Phosphorylase superfamily D1096_RS05030 PF01791 DeoC/LacD family aldolase D1096_RS05035 PF07670 Nucleoside recognition D1096_RS05035 PF07662 Na+ dependent nucleoside transporter C-terminus D1096_RS05035 PF01773 Na+ dependent nucleoside transporter N-terminus D1096_RS05045 PF01081 KDPG and KHG aldolase D1096_RS05050 PF00294 pfkB family carbohydrate kinase D1096_RS05055 PF02614 Glucuronate isomerase D1096_RS05065 PF07729 FCD domain D1096_RS05065 PF00392 Bacterial regulatory proteins, gntR family D1096_RS05075 PF01641 SelR domain D1096_RS05075 PF01625 Peptide methionine sulfoxide reductase D1096_RS05080 PF00535 Glycosyl transferase family 2 D1096_RS05085 PF00535 Glycosyl transferase family 2 D1096_RS05095 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) D1096_RS05105 PF04230 Polysaccharide pyruvyl transferase D1096_RS05110 PF02698 DUF218 domain D1096_RS05115 PF18319 PriA DNA helicase Cys-rich region (CRR) domain D1096_RS05115 PF18074 Primosomal protein N C-terminal domain D1096_RS05115 PF17764 3′ DNA-binding domain (3′BD) D1096_RS05115 PF00271 Helicase conserved C-terminal domain D1096_RS05115 PF00270 DEAD/DEAH box helicase D1096_RS05120 PF00800 Prephenate dehydratase D1096_RS05120 PF01817 Chorismate mutase type II D1096_RS05125 PF01432 Peptidase family M3 D1096_RS05130 PF04055 Radical SAM superfamily D1096_RS05135 PF02901 Pyruvate formate lyase-like D1096_RS05135 PF01228 Glycine radical D1096_RS05140 PF01226 Formate/nitrite transporter D1096_RS05150 PF01435 Peptidase family M48 D1096_RS05155 PF11799 impB/mucB/samB family C-terminal domain D1096_RS05155 PF00817 impB/mucB/samB family D1096_RS05155 PF11798 IMS family HHH motif D1096_RS05160 PF03956 Lysine exporter LysO D1096_RS05165 PF00425 chorismate binding enzyme D1096_RS05170 PF00155 Aminotransferase class I and II D1096_RS05175 PF00892 EamA-like transporter family D1096_RS05180 PF00892 EamA-like transporter family D1096_RS05185 PF01810 LysE type translocator D1096_RS05190 PF04886 PT repeat D1096_RS05190 PF07715 TonB-dependent Receptor Plug Domain D1096_RS05190 PF00593 TonB dependent receptor D1096_RS05195 PF01243 Pyridoxamine 5'-phosphate oxidase D1096_RS05205 PF03918 Cytochrome C biogenesis protein D1096_RS05210 PF08534 Redoxin D1096_RS05215 PF01578 Cytochrome C assembly protein D1096_RS05215 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal D1096_RS05220 PF00999 Sodium/hydrogen exchanger family D1096_RS05220 PF02254 TrkA-N domain D1096_RS05225 PF12633 Adenylate cyclase NT domain D1096_RS05225 PF01295 Adenylate cyclase, class-I D1096_RS05230 PF00109 Beta-ketoacyl synthase, N-terminal domain D1096_RS05230 PF02801 Beta-ketoacyl synthase, C-terminal domain D1096_RS05240 PF04076 Bacterial OB fold (BOF) protein D1096_RS05255 PF00486 Transcriptional regulatory protein, C terminal D1096_RS05255 PF00072 Response regulator receiver domain D1096_RS05260 PF00512 His Kinase A (phospho-acceptor) domain D1096_RS05260 PF08521 Two-component sensor kinase N-terminal D1096_RS05260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1096_RS05265 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) D1096_RS05270 PF02699 Preprotein translocase subunit D1096_RS05275 PF02355 Protein export membrane protein D1096_RS05275 PF13721 SecD export protein N-terminal TM region D1096_RS05275 PF07549 SecD/SecF GG Motif D1096_RS05280 PF02355 Protein export membrane protein D1096_RS05280 PF07549 SecD/SecF GG Motif D1096_RS05285 PF00210 Ferritin-like domain D1096_RS05290 PF00210 Ferritin-like domain D1096_RS05295 PF00860 Permease family D1096_RS05300 PF02545 Maf-like protein D1096_RS05310 PF02926 THUMP domain D1096_RS05310 PF02568 Thiamine biosynthesis protein (ThiI) D1096_RS05315 PF00709 Adenylosuccinate synthetase D1096_RS05320 PF01145 SPFH domain / Band 7 family D1096_RS05325 PF01145 SPFH domain / Band 7 family D1096_RS05330 PF00085 Thioredoxin D1096_RS05335 PF00860 Permease family D1096_RS05340 PF00438 S-adenosylmethionine synthetase, N-terminal domain D1096_RS05340 PF02772 S-adenosylmethionine synthetase, central domain D1096_RS05340 PF02773 S-adenosylmethionine synthetase, C-terminal domain D1096_RS05350 PF13520 Amino acid permease D1096_RS05355 PF13520 Amino acid permease D1096_RS05365 PF07687 Peptidase dimerisation domain D1096_RS05365 PF01546 Peptidase family M20/M25/M40 D1096_RS05370 PF03922 OmpW family D1096_RS05375 PF00004 ATPase family associated with various cellular activities (AAA) D1096_RS05375 PF17871 AAA lid domain D1096_RS05375 PF10431 C-terminal, D2-small domain, of ClpB protein D1096_RS05375 PF07724 AAA domain (Cdc48 subfamily) D1096_RS05375 PF02861 Clp amino terminal domain, pathogenicity island component D1096_RS05380 PF01758 Sodium Bile acid symporter family D1096_RS05385 PF03960 ArsC family D1096_RS05395 PF00206 Lyase D1096_RS05395 PF10415 Fumarase C C-terminus D1096_RS05405 PF00586 AIR synthase related protein, N-terminal domain D1096_RS05405 PF02769 AIR synthase related protein, C-terminal domain D1096_RS05410 PF07501 G5 domain D1096_RS05410 PF00746 LPXTG cell wall anchor motif D1096_RS05410 PF04650 YSIRK type signal peptide D1096_RS05410 PF00728 Glycosyl hydrolase family 20, catalytic domain D1096_RS05415 PF06508 Queuosine biosynthesis protein QueC D1096_RS05420 PF01242 6-pyruvoyl tetrahydropterin synthase D1096_RS05425 PF04055 Radical SAM superfamily D1096_RS05440 PF02789 Cytosol aminopeptidase family, N-terminal domain D1096_RS05440 PF00883 Cytosol aminopeptidase family, catalytic domain D1096_RS05450 PF03739 Lipopolysaccharide export system permease LptF/LptG D1096_RS05455 PF03739 Lipopolysaccharide export system permease LptF/LptG D1096_RS05460 PF01336 OB-fold nucleic acid binding domain D1096_RS05460 PF14579 Helix-hairpin-helix motif D1096_RS05460 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D1096_RS05460 PF07733 Bacterial DNA polymerase III alpha NTPase domain D1096_RS05460 PF02811 PHP domain D1096_RS05480 PF01370 NAD dependent epimerase/dehydratase family D1096_RS05480 PF02222 ATP-grasp domain D1096_RS05485 PF01553 Acyltransferase D1096_RS05490 PF00717 Peptidase S24-like D1096_RS05490 PF01726 LexA DNA binding domain D1096_RS05495 PF02976 DNA mismatch repair enzyme MutH D1096_RS05500 PF03741 Integral membrane protein TerC family D1096_RS05505 PF00933 Glycosyl hydrolase family 3 N terminal domain D1096_RS05510 PF05958 tRNA (Uracil-5-)-methyltransferase D1096_RS05515 PF00113 Enolase, C-terminal TIM barrel domain D1096_RS05515 PF03952 Enolase, N-terminal domain D1096_RS05520 PF00293 NUDIX domain D1096_RS05525 PF10008 Uncharacterized protein conserved in bacteria (DUF2251) D1096_RS05530 PF00270 DEAD/DEAH box helicase D1096_RS05530 PF00570 HRDC domain D1096_RS05530 PF16124 RecQ zinc-binding D1096_RS05530 PF09382 RQC domain D1096_RS05530 PF00271 Helicase conserved C-terminal domain D1096_RS05535 PF01491 Frataxin-like domain D1096_RS05545 PF00814 Glycoprotease family D1096_RS05550 PF13525 Outer membrane lipoprotein D1096_RS05555 PF01479 S4 domain D1096_RS05555 PF00849 RNA pseudouridylate synthase D1096_RS05560 PF14256 YwiC-like protein D1096_RS05565 PF00365 Phosphofructokinase D1096_RS05570 PF00266 Aminotransferase class-V D1096_RS05575 PF00565 Staphylococcal nuclease homologue D1096_RS05580 PF01235 Sodium:alanine symporter family D1096_RS05585 PF01594 AI-2E family transporter D1096_RS05595 PF16325 Peptidase family U32 C-terminal domain D1096_RS05595 PF01136 Peptidase family U32 D1096_RS05600 PF04932 O-Antigen ligase D1096_RS05605 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) D1096_RS05605 PF00534 Glycosyl transferases group 1 D1096_RS05610 PF01467 Cytidylyltransferase-like D1096_RS05615 PF00929 Exonuclease D1096_RS05620 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE D1096_RS05625 PF01520 N-acetylmuramoyl-L-alanine amidase D1096_RS05625 PF01476 LysM domain D1096_RS05630 PF00342 Phosphoglucose isomerase D1096_RS05635 PF04380 Membrane fusogenic activity D1096_RS05660 PF18317 Shikimate 5'-dehydrogenase C-terminal domain D1096_RS05660 PF01488 Shikimate / quinate 5-dehydrogenase D1096_RS05660 PF08501 Shikimate dehydrogenase substrate binding domain D1096_RS05665 PF01300 Telomere recombination D1096_RS05670 PF01396 Topoisomerase DNA binding C4 zinc finger D1096_RS05675 PF04266 ASCH domain D1096_RS05680 PF02631 RecX family D1096_RS05685 PF00154 recA bacterial DNA recombination protein D1096_RS05690 PF01063 Amino-transferase class IV D1096_RS05695 PF00425 chorismate binding enzyme D1096_RS05700 PF02646 RmuC family D1096_RS05705 PF00117 Glutamine amidotransferase class-I D1096_RS05710 PF03625 Domain of unknown function DUF302 D1096_RS05710 PF02537 CrcB-like protein, Camphor Resistance (CrcB) D1096_RS05715 PF02938 GAD domain D1096_RS05715 PF01336 OB-fold nucleic acid binding domain D1096_RS05715 PF00152 tRNA synthetases class II (D, K and N) D1096_RS05720 PF00293 NUDIX domain D1096_RS05725 PF01709 Transcriptional regulator D1096_RS05735 PF02075 Crossover junction endodeoxyribonuclease RuvC D1096_RS05740 PF05193 Peptidase M16 inactive domain D1096_RS05740 PF00675 Insulinase (Peptidase family M16) D1096_RS05745 PF01717 Cobalamin-independent synthase, Catalytic domain D1096_RS05745 PF08267 Cobalamin-independent synthase, N-terminal domain D1096_RS05750 PF00939 Sodium:sulfate symporter transmembrane region D1096_RS05755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1096_RS05755 PF03466 LysR substrate binding domain D1096_RS05760 PF01298 C-lobe and N-lobe beta barrels of Tf-binding protein B D1096_RS05765 PF01479 S4 domain D1096_RS05765 PF00849 RNA pseudouridylate synthase D1096_RS05770 PF01300 Telomere recombination D1096_RS05775 PF04261 Dyp-type peroxidase family D1096_RS05780 PF04715 Anthranilate synthase component I, N terminal region D1096_RS05780 PF00425 chorismate binding enzyme D1096_RS05785 PF00117 Glutamine amidotransferase class-I D1096_RS05790 PF00591 Glycosyl transferase family, a/b domain D1096_RS05790 PF02885 Glycosyl transferase family, helical bundle domain D1096_RS05795 PF08241 Methyltransferase domain D1096_RS05800 PF16036 Chalcone isomerase-like D1096_RS05805 PF04325 Protein of unknown function (DUF465) D1096_RS05810 PF01281 Ribosomal protein L9, N-terminal domain D1096_RS05810 PF03948 Ribosomal protein L9, C-terminal domain D1096_RS05815 PF01084 Ribosomal protein S18 D1096_RS05820 PF00436 Single-strand binding protein family D1096_RS05825 PF01250 Ribosomal protein S6 D1096_RS05830 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain D1096_RS05830 PF02844 Phosphoribosylglycinamide synthetase, N domain D1096_RS05830 PF02843 Phosphoribosylglycinamide synthetase, C domain D1096_RS05835 PF04973 Nicotinamide mononucleotide transporter D1096_RS05840 PF09976 Tetratricopeptide repeat-like domain D1096_RS05845 PF03129 Anticodon binding domain D1096_RS05845 PF13393 Histidyl-tRNA synthetase D1096_RS05850 PF04551 GcpE protein D1096_RS05855 PF13464 Domain of unknown function (DUF4115) D1096_RS05860 PF01740 STAS domain D1096_RS05860 PF00916 Sulfate permease family D1096_RS05865 PF14698 Argininosuccinate lyase C-terminal D1096_RS05865 PF00206 Lyase D1096_RS05870 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D1096_RS05870 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D1096_RS05875 PF02254 TrkA-N domain D1096_RS05875 PF00999 Sodium/hydrogen exchanger family D1096_RS05885 PF03466 LysR substrate binding domain D1096_RS05885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1096_RS05900 PF12833 Helix-turn-helix domain D1096_RS05900 PF06719 AraC-type transcriptional regulator N-terminus D1096_RS05905 PF03466 LysR substrate binding domain D1096_RS05905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1096_RS05915 PF00296 Luciferase-like monooxygenase D1096_RS05920 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D1096_RS05920 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D1096_RS05925 PF00881 Nitroreductase family D1096_RS05930 PF01914 MarC family integral membrane protein D1096_RS05940 PF00756 Putative esterase D1096_RS05945 PF02798 Glutathione S-transferase, N-terminal domain D1096_RS05960 PF08240 Alcohol dehydrogenase GroES-like domain D1096_RS05960 PF00107 Zinc-binding dehydrogenase D1096_RS05965 PF02028 BCCT, betaine/carnitine/choline family transporter D1096_RS05980 PF03595 Voltage-dependent anion channel D1096_RS05985 PF13419 Haloacid dehalogenase-like hydrolase D1096_RS05995 PF00005 ABC transporter D1096_RS05995 PF00664 ABC transporter transmembrane region D1096_RS06000 PF02664 S-Ribosylhomocysteinase (LuxS) D1096_RS06005 PF02470 MlaD protein D1096_RS06010 PF01475 Ferric uptake regulator family D1096_RS06015 PF00258 Flavodoxin D1096_RS06020 PF01402 Ribbon-helix-helix protein, copG family D1096_RS06025 PF04073 Aminoacyl-tRNA editing domain D1096_RS06035 PF00860 Permease family D1096_RS06040 PF02635 DsrE/DsrF-like family D1096_RS06050 PF01176 Translation initiation factor 1A / IF-1 D1096_RS06055 PF10144 Bacterial virulence factor haemolysin D1096_RS06060 PF18429 Domain of unknown function (DUF5609) D1096_RS06065 PF04461 Protein of unknown function (DUF520) D1096_RS06075 PF00343 Carbohydrate phosphorylase D1096_RS06080 PF00196 Bacterial regulatory proteins, luxR family D1096_RS06080 PF17874 MalT-like TPR region D1096_RS06085 PF07148 Maltose operon periplasmic protein precursor (MalM) D1096_RS06090 PF02264 LamB porin D1096_RS06095 PF17912 MalK OB fold domain D1096_RS06095 PF00005 ABC transporter D1096_RS06100 PF01547 Bacterial extracellular solute-binding protein D1096_RS06105 PF00528 Binding-protein-dependent transport system inner membrane component D1096_RS06105 PF14785 Maltose transport system permease protein MalF P2 domain D1096_RS06110 PF00528 Binding-protein-dependent transport system inner membrane component D1096_RS06115 PF02446 4-alpha-glucanotransferase D1096_RS06120 PF02554 Carbon starvation protein CstA D1096_RS06125 PF01026 TatD related DNase D1096_RS06130 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D1096_RS06130 PF07992 Pyridine nucleotide-disulphide oxidoreductase D1096_RS06135 PF03350 Uncharacterized protein family, UPF0114 D1096_RS06140 PF00881 Nitroreductase family D1096_RS06155 PF00005 ABC transporter D1096_RS06160 PF01116 Fructose-bisphosphate aldolase class-II D1096_RS06165 PF00162 Phosphoglycerate kinase D1096_RS06170 PF00939 Sodium:sulfate symporter transmembrane region D1096_RS06175 PF00939 Sodium:sulfate symporter transmembrane region D1096_RS06180 PF00939 Sodium:sulfate symporter transmembrane region D1096_RS06185 PF00204 DNA gyrase B D1096_RS06185 PF01751 Toprim domain D1096_RS06185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1096_RS06185 PF00986 DNA gyrase B subunit, carboxyl terminus D1096_RS06190 PF00512 His Kinase A (phospho-acceptor) domain D1096_RS06190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1096_RS06195 PF00486 Transcriptional regulatory protein, C terminal D1096_RS06195 PF00072 Response regulator receiver domain D1096_RS06200 PF00005 ABC transporter D1096_RS06205 PF00528 Binding-protein-dependent transport system inner membrane component D1096_RS06210 PF00528 Binding-protein-dependent transport system inner membrane component D1096_RS06215 PF12849 PBP superfamily domain D1096_RS06220 PF09278 MerR, DNA binding D1096_RS06220 PF00376 MerR family regulatory protein D1096_RS06230 PF00403 Heavy-metal-associated domain D1096_RS06235 PF00403 Heavy-metal-associated domain D1096_RS06240 PF00106 short chain dehydrogenase D1096_RS06245 PF00881 Nitroreductase family D1096_RS06250 PF01343 Peptidase family S49 D1096_RS06255 PF00445 Ribonuclease T2 family D1096_RS06260 PF17283 SprT-like zinc ribbon domain D1096_RS06260 PF10263 SprT-like family D1096_RS06265 PF07992 Pyridine nucleotide-disulphide oxidoreductase D1096_RS06270 PF17674 HHH domain D1096_RS06270 PF16921 Tex protein YqgF-like domain D1096_RS06270 PF09371 Tex-like protein N-terminal domain D1096_RS06270 PF00575 S1 RNA binding domain D1096_RS06280 PF04055 Radical SAM superfamily D1096_RS06305 PF00749 tRNA synthetases class I (E and Q), catalytic domain D1096_RS06315 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system D1096_RS06320 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system D1096_RS06325 PF03966 Trm112p-like protein D1096_RS06330 PF02606 Tetraacyldisaccharide-1-P 4'-kinase D1096_RS06335 PF06689 ClpX C4-type zinc finger D1096_RS06335 PF10431 C-terminal, D2-small domain, of ClpB protein D1096_RS06335 PF07724 AAA domain (Cdc48 subfamily) D1096_RS06340 PF00574 Clp protease D1096_RS06345 PF02657 Fe-S metabolism associated domain D1096_RS06360 PF00929 Exonuclease D1096_RS06365 PF00005 ABC transporter D1096_RS06365 PF12848 ABC transporter D1096_RS06370 PF02627 Carboxymuconolactone decarboxylase family D1096_RS06385 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D1096_RS06390 PF01722 BolA-like protein D1096_RS06400 PF05494 MlaC protein D1096_RS06405 PF02470 MlaD protein D1096_RS06410 PF02405 Permease MlaE D1096_RS06415 PF00005 ABC transporter D1096_RS06420 PF00595 PDZ domain D1096_RS06425 PF01370 NAD dependent epimerase/dehydratase family D1096_RS06425 PF08338 Domain of unknown function (DUF1731) D1096_RS06430 PF01316 Arginine repressor, DNA binding domain D1096_RS06430 PF02863 Arginine repressor, C-terminal domain D1096_RS06435 PF00056 lactate/malate dehydrogenase, NAD binding domain D1096_RS06435 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain D1096_RS06445 PF05191 Adenylate kinase, active site lid D1096_RS06455 PF07690 Major Facilitator Superfamily D1096_RS06460 PF01370 NAD dependent epimerase/dehydratase family D1096_RS06465 PF01653 NAD-dependent DNA ligase adenylation domain D1096_RS06465 PF03120 NAD-dependent DNA ligase OB-fold domain D1096_RS06465 PF03119 NAD-dependent DNA ligase C4 zinc finger domain D1096_RS06465 PF12826 Helix-hairpin-helix motif D1096_RS06465 PF00533 BRCA1 C Terminus (BRCT) domain D1096_RS06470 PF04354 ZipA, C-terminal FtsZ-binding domain D1096_RS06485 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain D1096_RS06485 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D1096_RS06495 PF01177 Asp/Glu/Hydantoin racemase D1096_RS06500 PF07690 Major Facilitator Superfamily D1096_RS06505 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase D1096_RS06510 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain D1096_RS06510 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain D1096_RS06515 PF00459 Inositol monophosphatase family D1096_RS06520 PF00293 NUDIX domain D1096_RS06525 PF01479 S4 domain D1096_RS06530 PF01430 Hsp33 protein D1096_RS06535 PF03605 Anaerobic c4-dicarboxylate membrane transporter D1096_RS06540 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D1096_RS06540 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D1096_RS06545 PF00696 Amino acid kinase family D1096_RS06550 PF02378 Phosphotransferase system, EIIC D1096_RS06550 PF00367 phosphotransferase system, EIIB D1096_RS06555 PF00005 ABC transporter D1096_RS06560 PF00528 Binding-protein-dependent transport system inner membrane component D1096_RS06565 PF00381 PTS HPr component phosphorylation site D1096_RS06570 PF00391 PEP-utilising enzyme, mobile domain D1096_RS06570 PF02896 PEP-utilising enzyme, TIM barrel domain D1096_RS06570 PF05524 PEP-utilising enzyme, N-terminal D1096_RS06575 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 D1096_RS06580 PF00919 Uncharacterized protein family UPF0004 D1096_RS06580 PF01938 TRAM domain D1096_RS06580 PF04055 Radical SAM superfamily D1096_RS06585 PF00580 UvrD/REP helicase N-terminal domain D1096_RS06585 PF13361 UvrD-like helicase C-terminal domain D1096_RS06590 PF02492 CobW/HypB/UreG, nucleotide-binding domain D1096_RS06595 PF01924 Hydrogenase formation hypA family D1096_RS06600 PF00586 AIR synthase related protein, N-terminal domain D1096_RS06600 PF02769 AIR synthase related protein, C-terminal domain D1096_RS06605 PF13533 Biotin-lipoyl like D1096_RS06610 PF00664 ABC transporter transmembrane region D1096_RS06610 PF00005 ABC transporter D1096_RS06610 PF03412 Peptidase C39 family D1096_RS06615 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) D1096_RS06615 PF02382 N-terminal domain in RTX protein D1096_RS06615 PF08339 RTX C-terminal domain D1096_RS06620 PF02794 RTX toxin acyltransferase family D1096_RS06625 PF07503 HypF finger D1096_RS06625 PF01300 Telomere recombination D1096_RS06625 PF00708 Acylphosphatase D1096_RS06625 PF17788 HypF Kae1-like domain D1096_RS06630 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit D1096_RS06630 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal D1096_RS06635 PF13247 4Fe-4S dicluster domain D1096_RS06640 PF03916 Polysulphide reductase, NrfD D1096_RS06645 PF00374 Nickel-dependent hydrogenase D1096_RS06650 PF01750 Hydrogenase maturation protease D1096_RS06655 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE D1096_RS06660 PF01455 HupF/HypC family D1096_RS06665 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA D1096_RS06700 PF17757 UvrB interaction domain D1096_RS06700 PF03461 TRCF domain D1096_RS06700 PF00271 Helicase conserved C-terminal domain D1096_RS06700 PF00270 DEAD/DEAH box helicase D1096_RS06700 PF02559 CarD-like/TRCF domain D1096_RS06705 PF11940 Domain of unknown function (DUF3458) Ig-like fold D1096_RS06705 PF01433 Peptidase family M1 domain D1096_RS06705 PF17432 Domain of unknown function (DUF3458_C) ARM repeats D1096_RS06710 PF02660 Glycerol-3-phosphate acyltransferase D1096_RS06715 PF02152 Dihydroneopterin aldolase D1096_RS06720 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region D1096_RS06720 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D1096_RS06725 PF18075 FtsX extracellular domain D1096_RS06730 PF00005 ABC transporter D1096_RS06735 PF02881 SRP54-type protein, helical bundle domain D1096_RS06735 PF00448 SRP54-type protein, GTPase domain D1096_RS06745 PF04269 Protein of unknown function, DUF440 D1096_RS06750 PF01613 Flavin reductase like domain D1096_RS06755 PF09313 Domain of unknown function (DUF1971) D1096_RS06755 PF03848 Tellurite resistance protein TehB D1096_RS06760 PF00528 Binding-protein-dependent transport system inner membrane component D1096_RS06765 PF00528 Binding-protein-dependent transport system inner membrane component D1096_RS06770 PF00497 Bacterial extracellular solute-binding proteins, family 3 D1096_RS06775 PF00005 ABC transporter D1096_RS06780 PF01161 Phosphatidylethanolamine-binding protein D1096_RS06785 PF01699 Sodium/calcium exchanger protein D1096_RS06790 PF01381 Helix-turn-helix D1096_RS06800 PF13098 Thioredoxin-like domain D1096_RS06800 PF02683 Cytochrome C biogenesis protein transmembrane region D1096_RS06800 PF11412 Disulphide bond corrector protein DsbC D1096_RS06805 PF04315 Elongation factor P hydroxylase D1096_RS06810 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D1096_RS06815 PF04348 LppC putative lipoprotein D1096_RS06820 PF02021 Uncharacterised protein family UPF0102 D1096_RS06825 PF13580 SIS domain D1096_RS06830 PF04972 BON domain D1096_RS06840 PF00497 Bacterial extracellular solute-binding proteins, family 3 D1096_RS06840 PF01464 Transglycosylase SLT domain D1096_RS06860 PF01578 Cytochrome C assembly protein D1096_RS06860 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal D1096_RS06865 PF03100 CcmE D1096_RS06870 PF04995 Heme exporter protein D (CcmD) D1096_RS06875 PF01578 Cytochrome C assembly protein D1096_RS06880 PF03379 CcmB protein D1096_RS06885 PF00005 ABC transporter D1096_RS06890 PF00308 Bacterial dnaA protein D1096_RS06920 PF04277 Oxaloacetate decarboxylase, gamma chain D1096_RS06925 PF02436 Conserved carboxylase domain D1096_RS06925 PF00682 HMGL-like D1096_RS06925 PF00364 Biotin-requiring enzyme D1096_RS06930 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit D1096_RS06935 PF03831 PhnA domain D1096_RS06935 PF08274 PhnA Zinc-Ribbon D1096_RS06940 PF03150 Di-haem cytochrome c peroxidase D1096_RS06940 PF00034 Cytochrome c D1096_RS06940 PF14376 Haem-binding domain D1096_RS06945 PF02594 Uncharacterised ACR, YggU family COG1872 D1096_RS06950 PF02325 YGGT family D1096_RS06955 PF04320 Protein with unknown function (DUF469) D1096_RS06960 PF02390 Putative methyltransferase D1096_RS06965 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal D1096_RS06965 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D1096_RS06970 PF02504 Fatty acid synthesis protein D1096_RS06975 PF01783 Ribosomal L32p protein family D1096_RS06980 PF02620 Large ribosomal RNA subunit accumulation protein YceD D1096_RS06985 PF01578 Cytochrome C assembly protein D1096_RS06990 PF00571 CBS domain D1096_RS06990 PF01595 Cyclin M transmembrane N-terminal domain D1096_RS06990 PF03471 Transporter associated domain D1096_RS06995 PF00209 Sodium:neurotransmitter symporter family D1096_RS07010 PF03609 PTS system sorbose-specific iic component D1096_RS07015 PF03613 PTS system mannose/fructose/sorbose family IID component D1096_RS07020 PF06173 Protein of unknown function (DUF986) D1096_RS07025 PF01238 Phosphomannose isomerase type I D1096_RS07040 PF00528 Binding-protein-dependent transport system inner membrane component D1096_RS07045 PF08402 TOBE domain D1096_RS07045 PF00005 ABC transporter D1096_RS07050 PF01225 Mur ligase family, catalytic domain D1096_RS07050 PF02875 Mur ligase family, glutamate ligase domain D1096_RS07050 PF08245 Mur ligase middle domain D1096_RS07055 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain D1096_RS07065 PF03143 Elongation factor Tu C-terminal domain D1096_RS07065 PF03144 Elongation factor Tu domain 2 D1096_RS07065 PF00009 Elongation factor Tu GTP binding domain D1096_RS07070 PF00679 Elongation factor G C-terminus D1096_RS07070 PF14492 Elongation Factor G, domain II D1096_RS07070 PF03764 Elongation factor G, domain IV D1096_RS07070 PF00009 Elongation factor Tu GTP binding domain D1096_RS07070 PF03144 Elongation factor Tu domain 2 D1096_RS07075 PF00177 Ribosomal protein S7p/S5e D1096_RS07080 PF00164 Ribosomal protein S12/S23 D1096_RS07085 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D1096_RS07090 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D1096_RS07100 PF08525 Opacity-associated protein A N-terminal motif D1096_RS07100 PF04225 Opacity-associated protein A LysM-like domain D1096_RS07110 PF02666 Phosphatidylserine decarboxylase D1096_RS07115 PF08463 EcoEI R protein C-terminal D1096_RS07115 PF00271 Helicase conserved C-terminal domain D1096_RS07115 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) D1096_RS07115 PF04851 Type III restriction enzyme, res subunit D1096_RS07120 PF12161 HsdM N-terminal domain D1096_RS07120 PF02384 N-6 DNA Methylase D1096_RS07130 PF01420 Type I restriction modification DNA specificity domain D1096_RS07135 PF02899 Phage integrase, N-terminal SAM-like domain D1096_RS07135 PF00589 Phage integrase family D1096_RS07145 PF02655 ATP-grasp domain D1096_RS07145 PF18419 ATP-grasp-like domain D1096_RS07145 PF04262 Glutamate-cysteine ligase D1096_RS07155 PF03222 Tryptophan/tyrosine permease family D1096_RS07160 PF04175 Protein of unknown function (DUF406) D1096_RS07170 PF00501 AMP-binding enzyme D1096_RS07175 PF06039 Malate:quinone oxidoreductase (Mqo) D1096_RS07195 PF02653 Branched-chain amino acid transport system / permease component D1096_RS07200 PF00005 ABC transporter D1096_RS07205 PF13407 Periplasmic binding protein domain D1096_RS07210 PF00691 OmpA family D1096_RS07210 PF01389 OmpA-like transmembrane domain D1096_RS07215 PF13183 4Fe-4S dicluster domain D1096_RS07215 PF01565 FAD binding domain D1096_RS07215 PF02913 FAD linked oxidases, C-terminal domain D1096_RS07220 PF03061 Thioesterase superfamily D1096_RS07225 PF02096 60Kd inner membrane protein D1096_RS07225 PF14849 YidC periplasmic domain D1096_RS07230 PF03264 NapC/NirT cytochrome c family, N-terminal region D1096_RS07235 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) D1096_RS07240 PF12801 4Fe-4S binding domain D1096_RS07240 PF12837 4Fe-4S binding domain D1096_RS07245 PF12800 4Fe-4S binding domain D1096_RS07245 PF12838 4Fe-4S dicluster domain D1096_RS07250 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D1096_RS07250 PF01568 Molydopterin dinucleotide binding domain D1096_RS07250 PF10518 TAT (twin-arginine translocation) pathway signal sequence D1096_RS07250 PF00384 Molybdopterin oxidoreductase D1096_RS07260 PF12838 4Fe-4S dicluster domain D1096_RS07260 PF13187 4Fe-4S dicluster domain D1096_RS07265 PF02525 Flavodoxin-like fold D1096_RS07280 PF00575 S1 RNA binding domain D1096_RS07280 PF10150 Ribonuclease E/G family D1096_RS07280 PF12111 Polyribonucleotide phosphorylase C terminal D1096_RS07290 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family D1096_RS07295 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase D1096_RS07300 PF01297 Zinc-uptake complex component A periplasmic D1096_RS07310 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D1096_RS07310 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D1096_RS07315 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) D1096_RS07320 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D1096_RS07320 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D1096_RS07320 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D1096_RS07320 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D1096_RS07325 PF00291 Pyridoxal-phosphate dependent enzyme D1096_RS07325 PF00585 C-terminal regulatory domain of Threonine dehydratase D1096_RS07330 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D1096_RS07340 PF00230 Major intrinsic protein D1096_RS07350 PF18389 TrmO C-terminal domain D1096_RS07350 PF01980 tRNA-methyltransferase O D1096_RS07355 PF06250 YhcG PDDEXK nuclease domain D1096_RS07355 PF17761 DUF1016 N-terminal domain D1096_RS07360 PF01040 UbiA prenyltransferase family D1096_RS07365 PF01521 Iron-sulphur cluster biosynthesis D1096_RS07380 PF00534 Glycosyl transferases group 1 D1096_RS07380 PF13439 Glycosyltransferase Family 4 D1096_RS07400 PF01943 Polysaccharide biosynthesis protein D1096_RS07405 PF03275 UDP-galactopyranose mutase D1096_RS07410 PF02397 Bacterial sugar transferase D1096_RS07415 PF01757 Acyltransferase family D1096_RS07430 PF16363 GDP-mannose 4,6 dehydratase D1096_RS07435 PF01165 Ribosomal protein S21 D1096_RS07440 PF10410 DnaB-helicase binding domain of primase D1096_RS07440 PF08278 DNA primase DnaG DnaB-binding D1096_RS07440 PF08275 DNA primase catalytic core, N-terminal domain D1096_RS07440 PF01807 CHC2 zinc finger D1096_RS07445 PF04546 Sigma-70, non-essential region D1096_RS07445 PF03979 Sigma-70 factor, region 1.1 D1096_RS07445 PF00140 Sigma-70 factor, region 1.2 D1096_RS07445 PF04542 Sigma-70 region 2 D1096_RS07445 PF04545 Sigma-70, region 4 D1096_RS07445 PF04539 Sigma-70 region 3 D1096_RS07450 PF01479 S4 domain D1096_RS07450 PF00579 tRNA synthetases class I (W and Y) D1096_RS07460 PF00575 S1 RNA binding domain D1096_RS07460 PF17876 Cold shock domain D1096_RS07460 PF08461 Ribonuclease R winged-helix domain D1096_RS07460 PF08206 Ribonuclease B OB domain D1096_RS07460 PF00773 RNB domain D1096_RS07465 PF00578 AhpC/TSA family D1096_RS07470 PF00440 Bacterial regulatory proteins, tetR family D1096_RS07475 PF03466 LysR substrate binding domain D1096_RS07475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1096_RS07480 PF00462 Glutaredoxin D1096_RS07480 PF08534 Redoxin D1096_RS07490 PF08543 Phosphomethylpyrimidine kinase D1096_RS07500 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit D1096_RS07505 PF07731 Multicopper oxidase D1096_RS07505 PF07732 Multicopper oxidase D1096_RS07510 PF01553 Acyltransferase D1096_RS07515 PF08534 Redoxin D1096_RS07520 PF10396 GTP-binding protein TrmE N-terminus D1096_RS07520 PF12631 MnmE helical domain D1096_RS07520 PF01926 50S ribosome-binding GTPase D1096_RS07525 PF05167 Uncharacterised ACR (DUF711) D1096_RS07535 PF17954 Quercetinase C-terminal cupin domain D1096_RS07535 PF02678 Pirin D1096_RS07540 PF00210 Ferritin-like domain D1096_RS07555 PF12805 FUSC-like inner membrane protein yccS D1096_RS07560 PF02142 MGS-like domain D1096_RS07565 PF14821 Threonine synthase N terminus D1096_RS07565 PF00291 Pyridoxal-phosphate dependent enzyme D1096_RS07575 PF08264 Anticodon-binding domain of tRNA D1096_RS07575 PF10458 Valyl tRNA synthetase tRNA binding arm D1096_RS07575 PF00133 tRNA synthetases class I (I, L, M and V) D1096_RS07590 PF13673 Acetyltransferase (GNAT) domain D1096_RS07595 PF04364 DNA polymerase III chi subunit, HolC D1096_RS07600 PF01476 LysM domain D1096_RS07605 PF05697 Bacterial trigger factor protein (TF) D1096_RS07605 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D1096_RS07605 PF05698 Bacterial trigger factor protein (TF) C-terminus D1096_RS07610 PF00581 Rhodanese-like domain D1096_RS07615 PF02556 Preprotein translocase subunit SecB D1096_RS07620 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus D1096_RS07620 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus D1096_RS07625 PF00132 Bacterial transferase hexapeptide (six repeats) D1096_RS07625 PF06426 Serine acetyltransferase, N-terminal D1096_RS07630 PF03143 Elongation factor Tu C-terminal domain D1096_RS07630 PF00009 Elongation factor Tu GTP binding domain D1096_RS07630 PF03144 Elongation factor Tu domain 2 D1096_RS07655 PF00485 Phosphoribulokinase / Uridine kinase family D1096_RS07660 PF08534 Redoxin D1096_RS07665 PF03918 Cytochrome C biogenesis protein D1096_RS07670 PF03918 Cytochrome C biogenesis protein D1096_RS07675 PF00994 Probable molybdopterin binding domain D1096_RS07680 PF00543 Nitrogen regulatory protein P-II D1096_RS07685 PF01252 Signal peptidase (SPase) II D1096_RS07690 PF02401 LytB protein D1096_RS07695 PF03937 Flavinator of succinate dehydrogenase D1096_RS07705 PF04055 Radical SAM superfamily D1096_RS07710 PF02798 Glutathione S-transferase, N-terminal domain D1096_RS07710 PF00043 Glutathione S-transferase, C-terminal domain D1096_RS07715 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain D1096_RS07715 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D1096_RS07725 PF02313 Fumarate reductase subunit D D1096_RS07730 PF02300 Fumarate reductase subunit C D1096_RS07735 PF13183 4Fe-4S dicluster domain D1096_RS07735 PF13085 2Fe-2S iron-sulfur cluster binding domain D1096_RS07740 PF00890 FAD binding domain D1096_RS07740 PF02910 Fumarate reductase flavoprotein C-term D1096_RS07745 PF00152 tRNA synthetases class II (D, K and N) D1096_RS07750 PF01678 Diaminopimelate epimerase D1096_RS07755 PF03605 Anaerobic c4-dicarboxylate membrane transporter D1096_RS07760 PF02537 CrcB-like protein, Camphor Resistance (CrcB) D1096_RS07770 PF03702 Anhydro-N-acetylmuramic acid kinase D1096_RS07775 PF01380 SIS domain D1096_RS07795 PF01523 Putative modulator of DNA gyrase D1096_RS07800 PF09179 TilS substrate binding domain D1096_RS07800 PF01171 PP-loop family D1096_RS07800 PF11734 TilS substrate C-terminal domain D1096_RS07810 PF00589 Phage integrase family D1096_RS07810 PF02899 Phage integrase, N-terminal SAM-like domain D1096_RS07870 PF03808 Glycosyl transferase WecB/TagA/CpsF family D1096_RS07875 PF06899 WzyE protein, O-antigen assembly polymerase D1096_RS07880 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 D1096_RS07885 PF03063 Prismane/CO dehydrogenase family D1096_RS07890 PF00970 Oxidoreductase FAD-binding domain D1096_RS07890 PF00111 2Fe-2S iron-sulfur cluster binding domain D1096_RS07890 PF00175 Oxidoreductase NAD-binding domain D1096_RS07895 PF01943 Polysaccharide biosynthesis protein D1096_RS07900 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family D1096_RS07910 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D1096_RS07910 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D1096_RS07910 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D1096_RS07915 PF02350 UDP-N-acetylglucosamine 2-epimerase D1096_RS07925 PF00953 Glycosyl transferase family 4 D1096_RS07930 PF00202 Aminotransferase class-III D1096_RS07940 PF03023 Lipid II flippase MurJ D1096_RS07945 PF01649 Ribosomal protein S20 D1096_RS07950 PF02254 TrkA-N domain D1096_RS07950 PF02080 TrkA-C domain D1096_RS07955 PF01029 NusB family D1096_RS07955 PF01189 16S rRNA methyltransferase RsmB/F D1096_RS07960 PF09107 Elongation factor SelB, winged helix D1096_RS07960 PF09106 Elongation factor SelB, winged helix D1096_RS07960 PF03144 Elongation factor Tu domain 2 D1096_RS07960 PF00009 Elongation factor Tu GTP binding domain D1096_RS07965 PF03841 L-seryl-tRNA selenium transferase D1096_RS07975 PF00258 Flavodoxin D1096_RS07980 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D1096_RS07980 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D1096_RS07995 PF00593 TonB dependent receptor D1096_RS07995 PF07715 TonB-dependent Receptor Plug Domain D1096_RS08000 PF17484 N-Lobe handle Tf-binding protein B D1096_RS08000 PF17483 C-lobe handle domain of Tf-binding protein B D1096_RS08000 PF01298 C-lobe and N-lobe beta barrels of Tf-binding protein B D1096_RS08005 PF02472 Biopolymer transport protein ExbD/TolR D1096_RS08010 PF01618 MotA/TolQ/ExbB proton channel family D1096_RS08035 PF17311 Family of unknown function (DUF5358) D1096_RS08050 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase D1096_RS08060 PF01467 Cytidylyltransferase-like D1096_RS08070 PF02563 Polysaccharide biosynthesis/export protein D1096_RS08080 PF01061 ABC-2 type transporter D1096_RS08085 PF00005 ABC transporter D1096_RS08090 PF00005 ABC transporter D1096_RS08095 PF00551 Formyl transferase D1096_RS08095 PF02911 Formyl transferase, C-terminal domain D1096_RS08105 PF01205 Uncharacterized protein family UPF0029 D1096_RS08105 PF09186 Domain of unknown function (DUF1949) D1096_RS08110 PF02386 Cation transport protein D1096_RS08115 PF12724 Flavodoxin domain D1096_RS08120 PF01741 Large-conductance mechanosensitive channel, MscL D1096_RS08125 PF04055 Radical SAM superfamily D1096_RS08130 PF03099 Biotin/lipoate A/B protein ligase family D1096_RS08135 PF04359 Protein of unknown function (DUF493) D1096_RS08140 PF00768 D-alanyl-D-alanine carboxypeptidase D1096_RS08140 PF07943 Penicillin-binding protein 5, C-terminal domain D1096_RS08145 PF03330 Lytic transglycolase D1096_RS08150 PF01098 Cell cycle protein D1096_RS08155 PF03717 Penicillin-binding Protein dimerisation domain D1096_RS08155 PF00905 Penicillin binding protein transpeptidase domain D1096_RS08160 PF02590 Predicted SPOUT methyltransferase D1096_RS08170 PF00488 MutS domain V D1096_RS08170 PF05190 MutS family domain IV D1096_RS08170 PF05188 MutS domain II D1096_RS08170 PF01624 MutS domain I D1096_RS08170 PF05192 MutS domain III D1096_RS08175 PF00005 ABC transporter D1096_RS08185 PF03313 Serine dehydratase alpha chain D1096_RS08190 PF01814 Hemerythrin HHE cation binding domain D1096_RS08190 PF04405 Domain of Unknown function (DUF542) D1096_RS08195 PF00893 Small Multidrug Resistance protein D1096_RS08200 PF04175 Protein of unknown function (DUF406) D1096_RS08215 PF01774 UreD urease accessory protein D1096_RS08220 PF02492 CobW/HypB/UreG, nucleotide-binding domain D1096_RS08225 PF01730 UreF D1096_RS08230 PF05194 UreE urease accessory protein, C-terminal domain D1096_RS08230 PF02814 UreE urease accessory protein, N-terminal domain D1096_RS08240 PF00449 Urease alpha-subunit, N-terminal domain D1096_RS08240 PF01979 Amidohydrolase family D1096_RS08245 PF00699 Urease beta subunit D1096_RS08250 PF00547 Urease, gamma subunit D1096_RS08260 PF00005 ABC transporter D1096_RS08270 PF01891 Cobalt uptake substrate-specific transmembrane region D1096_RS08280 PF10670 Domain of unknown function (DUF4198) D1096_RS08285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1096_RS08285 PF03466 LysR substrate binding domain D1096_RS08295 PF03600 Citrate transporter D1096_RS08295 PF02080 TrkA-C domain D1096_RS08300 PF05068 Mannitol repressor D1096_RS08305 PF08125 Mannitol dehydrogenase C-terminal domain D1096_RS08305 PF01232 Mannitol dehydrogenase Rossmann domain D1096_RS08310 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D1096_RS08310 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D1096_RS08310 PF02378 Phosphotransferase system, EIIC D1096_RS08315 PF01380 SIS domain D1096_RS08320 PF00455 DeoR C terminal sensor domain D1096_RS08320 PF08220 DeoR-like helix-turn-helix domain D1096_RS08335 PF18071 HMW1C N-terminal D1096_RS08335 PF18254 HMW1 domain 2 D1096_RS08340 PF04055 Radical SAM superfamily D1096_RS08340 PF00919 Uncharacterized protein family UPF0004 D1096_RS08340 PF18693 TRAM domain D1096_RS08345 PF01048 Phosphorylase superfamily D1096_RS08355 PF04102 SlyX D1096_RS08360 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D1096_RS08360 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase D1096_RS08365 PF13309 HTH domain D1096_RS08365 PF08348 YheO-like PAS domain D1096_RS08370 PF02635 DsrE/DsrF-like family D1096_RS08375 PF02635 DsrE/DsrF-like family D1096_RS08380 PF04077 DsrH like protein D1096_RS08405 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain D1096_RS08410 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D1096_RS08410 PF02874 ATP synthase alpha/beta family, beta-barrel domain D1096_RS08415 PF00231 ATP synthase D1096_RS08420 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D1096_RS08420 PF00306 ATP synthase alpha/beta chain, C terminal domain D1096_RS08420 PF02874 ATP synthase alpha/beta family, beta-barrel domain D1096_RS08425 PF00213 ATP synthase delta (OSCP) subunit D1096_RS08430 PF00430 ATP synthase B/B' CF(0) D1096_RS08435 PF00137 ATP synthase subunit C D1096_RS08440 PF00119 ATP synthase A chain D1096_RS08450 PF02527 rRNA small subunit methyltransferase G D1096_RS08455 PF01134 Glucose inhibited division protein A D1096_RS08455 PF13932 GidA associated domain D1096_RS08465 PF00497 Bacterial extracellular solute-binding proteins, family 3 D1096_RS08470 PF02810 SEC-C motif D1096_RS08480 PF03613 PTS system mannose/fructose/sorbose family IID component D1096_RS08485 PF03609 PTS system sorbose-specific iic component D1096_RS08490 PF03830 PTS system sorbose subfamily IIB component D1096_RS08490 PF03610 PTS system fructose IIA component D1096_RS08495 PF02447 GntP family permease D1096_RS08500 PF01202 Shikimate kinase D1096_RS08505 PF00356 Bacterial regulatory proteins, lacI family D1096_RS08505 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D1096_RS08510 PF00356 Bacterial regulatory proteins, lacI family D1096_RS08515 PF05025 RbsD / FucU transport protein family D1096_RS08520 PF00005 ABC transporter D1096_RS08525 PF02653 Branched-chain amino acid transport system / permease component D1096_RS08530 PF13407 Periplasmic binding protein domain D1096_RS08535 PF00294 pfkB family carbohydrate kinase D1096_RS08540 PF01568 Molydopterin dinucleotide binding domain D1096_RS08540 PF00384 Molybdopterin oxidoreductase D1096_RS08540 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D1096_RS08545 PF13247 4Fe-4S dicluster domain D1096_RS08545 PF12800 4Fe-4S binding domain D1096_RS08550 PF04976 DMSO reductase anchor subunit (DmsC) D1096_RS08555 PF02613 Nitrate reductase delta subunit D1096_RS08560 PF00037 4Fe-4S binding domain D1096_RS08560 PF12838 4Fe-4S dicluster domain D1096_RS08580 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal D1096_RS08580 PF02769 AIR synthase related protein, C-terminal domain D1096_RS08580 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain D1096_RS08585 PF08220 DeoR-like helix-turn-helix domain D1096_RS08585 PF00455 DeoR C terminal sensor domain D1096_RS08590 PF02952 L-fucose isomerase, C-terminal domain D1096_RS08590 PF07881 L-fucose isomerase, first N-terminal domain D1096_RS08590 PF07882 L-fucose isomerase, second N-terminal domain D1096_RS08595 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D1096_RS08595 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D1096_RS08600 PF05025 RbsD / FucU transport protein family D1096_RS08605 PF00596 Class II Aldolase and Adducin N-terminal domain D1096_RS08610 PF07690 Major Facilitator Superfamily D1096_RS08615 PF00465 Iron-containing alcohol dehydrogenase D1096_RS08620 PF07274 Protein of unknown function (DUF1440) D1096_RS08625 PF00528 Binding-protein-dependent transport system inner membrane component D1096_RS08630 PF00528 Binding-protein-dependent transport system inner membrane component D1096_RS08635 PF00005 ABC transporter D1096_RS08640 PF00497 Bacterial extracellular solute-binding proteins, family 3 D1096_RS08645 PF05159 Capsule polysaccharide biosynthesis protein D1096_RS08650 PF05159 Capsule polysaccharide biosynthesis protein D1096_RS08660 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family D1096_RS08665 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D1096_RS08670 PF03611 PTS system sugar-specific permease component D1096_RS08680 PF00455 DeoR C terminal sensor domain D1096_RS08680 PF08220 DeoR-like helix-turn-helix domain D1096_RS08685 PF01261 Xylose isomerase-like TIM barrel D1096_RS08690 PF00596 Class II Aldolase and Adducin N-terminal domain D1096_RS08695 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D1096_RS08695 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase D1096_RS08715 PF04575 Protein of unknown function (DUF560) D1096_RS08720 PF01370 NAD dependent epimerase/dehydratase family D1096_RS08725 PF01327 Polypeptide deformylase D1096_RS08730 PF17782 DprA winged helix domain D1096_RS08730 PF02481 DNA recombination-mediator protein A D1096_RS08735 PF03169 OPT oligopeptide transporter protein D1096_RS08740 PF03611 PTS system sugar-specific permease component D1096_RS08750 PF00584 SecE/Sec61-gamma subunits of protein translocation complex D1096_RS08755 PF02357 Transcription termination factor nusG D1096_RS08755 PF00467 KOW motif D1096_RS08760 PF03946 Ribosomal protein L11, N-terminal domain D1096_RS08760 PF00298 Ribosomal protein L11, RNA binding domain D1096_RS08765 PF00687 Ribosomal protein L1p/L10e family D1096_RS08770 PF00466 Ribosomal protein L10 D1096_RS08775 PF00542 Ribosomal protein L7/L12 C-terminal domain D1096_RS08775 PF16320 Ribosomal protein L7/L12 dimerisation domain D1096_RS08810 PF04560 RNA polymerase Rpb2, domain 7 D1096_RS08810 PF04565 RNA polymerase Rpb2, domain 3 D1096_RS08810 PF00562 RNA polymerase Rpb2, domain 6 D1096_RS08810 PF10385 RNA polymerase beta subunit external 1 domain D1096_RS08810 PF04561 RNA polymerase Rpb2, domain 2 D1096_RS08810 PF04563 RNA polymerase beta subunit D1096_RS08815 PF04997 RNA polymerase Rpb1, domain 1 D1096_RS08815 PF04983 RNA polymerase Rpb1, domain 3 D1096_RS08815 PF05000 RNA polymerase Rpb1, domain 4 D1096_RS08815 PF04998 RNA polymerase Rpb1, domain 5 D1096_RS08815 PF00623 RNA polymerase Rpb1, domain 2 D1096_RS08835 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin D1096_RS08840 PF01850 PIN domain D1096_RS08860 PF00004 ATPase family associated with various cellular activities (AAA) D1096_RS08860 PF07724 AAA domain (Cdc48 subfamily) D1096_RS08860 PF10431 C-terminal, D2-small domain, of ClpB protein D1096_RS08865 PF00227 Proteasome subunit D1096_RS08870 PF03749 Sugar fermentation stimulation protein RE domain D1096_RS08870 PF17746 SfsA N-terminal OB domain D1096_RS08875 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D1096_RS08880 PF00730 HhH-GPD superfamily base excision DNA repair protein D1096_RS08880 PF14815 NUDIX domain D1096_RS08885 PF04362 Bacterial Fe(2+) trafficking D1096_RS08890 PF01464 Transglycosylase SLT domain D1096_RS08890 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain D1096_RS08915 PF02978 Signal peptide binding domain D1096_RS08915 PF00448 SRP54-type protein, GTPase domain D1096_RS08915 PF02881 SRP54-type protein, helical bundle domain D1096_RS08920 PF02872 5'-nucleotidase, C-terminal domain D1096_RS08920 PF00149 Calcineurin-like phosphoesterase D1096_RS08925 PF01494 FAD binding domain D1096_RS08930 PF01381 Helix-turn-helix D1096_RS08935 PF01078 Magnesium chelatase, subunit ChlI D1096_RS08935 PF13335 Magnesium chelatase, subunit ChlI C-terminal D1096_RS08945 PF00561 alpha/beta hydrolase fold D1096_RS08950 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D1096_RS08950 PF16582 Middle domain of thiamine pyrophosphate D1096_RS08950 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D1096_RS08955 PF02348 Cytidylyltransferase D1096_RS08955 PF13472 GDSL-like Lipase/Acylhydrolase family D1096_RS08960 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase D1096_RS08965 PF00480 ROK family D1096_RS08970 PF00701 Dihydrodipicolinate synthetase family D1096_RS08975 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase D1096_RS08980 PF01979 Amidohydrolase family D1096_RS08985 PF00206 Lyase D1096_RS08985 PF10415 Fumarase C C-terminus D1096_RS08995 PF00338 Ribosomal protein S10p/S20e D1096_RS09000 PF00297 Ribosomal protein L3 D1096_RS09005 PF00573 Ribosomal protein L4/L1 family D1096_RS09010 PF00276 Ribosomal protein L23 D1096_RS09015 PF00181 Ribosomal Proteins L2, RNA binding domain D1096_RS09015 PF03947 Ribosomal Proteins L2, C-terminal domain D1096_RS09020 PF00203 Ribosomal protein S19 D1096_RS09025 PF00237 Ribosomal protein L22p/L17e D1096_RS09030 PF07650 KH domain D1096_RS09030 PF00189 Ribosomal protein S3, C-terminal domain D1096_RS09035 PF00252 Ribosomal protein L16p/L10e D1096_RS09040 PF00831 Ribosomal L29 protein D1096_RS09045 PF00366 Ribosomal protein S17 D1096_RS09050 PF00238 Ribosomal protein L14p/L23e D1096_RS09055 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 D1096_RS09060 PF00673 ribosomal L5P family C-terminus D1096_RS09060 PF00281 Ribosomal protein L5 D1096_RS09065 PF00253 Ribosomal protein S14p/S29e D1096_RS09070 PF00410 Ribosomal protein S8 D1096_RS09075 PF00347 Ribosomal protein L6 D1096_RS09080 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast D1096_RS09085 PF00333 Ribosomal protein S5, N-terminal domain D1096_RS09085 PF03719 Ribosomal protein S5, C-terminal domain D1096_RS09090 PF00327 Ribosomal protein L30p/L7e D1096_RS09095 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A D1096_RS09100 PF00344 SecY translocase D1096_RS09105 PF00444 Ribosomal protein L36 D1096_RS09110 PF00416 Ribosomal protein S13/S18 D1096_RS09115 PF00411 Ribosomal protein S11 D1096_RS09120 PF00163 Ribosomal protein S4/S9 N-terminal domain D1096_RS09120 PF01479 S4 domain D1096_RS09125 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain D1096_RS09125 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain D1096_RS09125 PF01000 RNA polymerase Rpb3/RpoA insert domain D1096_RS09130 PF01196 Ribosomal protein L17 D1096_RS09135 PF00886 Ribosomal protein S16 D1096_RS09140 PF01782 RimM N-terminal domain D1096_RS09140 PF05239 PRC-barrel domain D1096_RS09145 PF01746 tRNA (Guanine-1)-methyltransferase D1096_RS09150 PF01245 Ribosomal protein L19 D1096_RS09155 PF08007 Cupin superfamily protein D1096_RS09160 PF01497 Periplasmic binding protein D1096_RS09165 PF01032 FecCD transport family D1096_RS09170 PF00005 ABC transporter D1096_RS09175 PF00127 Copper binding proteins, plastocyanin/azurin family D1096_RS09190 PF02613 Nitrate reductase delta subunit D1096_RS09195 PF00384 Molybdopterin oxidoreductase D1096_RS09195 PF18364 Molybdopterin oxidoreductase N-terminal domain D1096_RS09195 PF01568 Molydopterin dinucleotide binding domain D1096_RS09205 PF02091 Glycyl-tRNA synthetase alpha subunit D1096_RS09210 PF04480 Protein of unknown function (DUF559) D1096_RS09220 PF05746 DALR anticodon binding domain D1096_RS09220 PF02092 Glycyl-tRNA synthetase beta subunit D1096_RS09225 PF17347 Family of unknown function (DUF5377) D1096_RS09230 PF00589 Phage integrase family D1096_RS09230 PF02899 Phage integrase, N-terminal SAM-like domain D1096_RS09235 PF04304 Protein of unknown function (DUF454) D1096_RS09245 PF00149 Calcineurin-like phosphoesterase D1096_RS09250 PF07509 Protein of unknown function (DUF1523) D1096_RS09255 PF01026 TatD related DNase D1096_RS09260 PF00005 ABC transporter D1096_RS09260 PF02687 FtsX-like permease family D1096_RS09260 PF12704 MacB-like periplasmic core domain D1096_RS09265 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D1096_RS09270 PF06629 MltA-interacting protein MipA D1096_RS09275 PF09115 DNA polymerase III, delta subunit, C terminal D1096_RS09280 PF02223 Thymidylate kinase D1096_RS09285 PF02618 YceG-like family D1096_RS09305 PF00550 Phosphopantetheine attachment site D1096_RS09310 PF00834 Ribulose-phosphate 3 epimerase family D1096_RS09315 PF01197 Ribosomal protein L31 D1096_RS09320 PF00444 Ribosomal protein L36 D1096_RS09325 PF00905 Penicillin binding protein transpeptidase domain D1096_RS09325 PF14814 Bifunctional transglycosylase second domain D1096_RS09325 PF00912 Transglycosylase D1096_RS09330 PF00378 Enoyl-CoA hydratase/isomerase D1096_RS09335 PF13291 ACT domain D1096_RS09335 PF04607 Region found in RelA / SpoT proteins D1096_RS09335 PF02824 TGS domain D1096_RS09340 PF01192 RNA polymerase Rpb6 D1096_RS09345 PF00270 DEAD/DEAH box helicase D1096_RS09345 PF00271 Helicase conserved C-terminal domain D1096_RS09345 PF17191 RecG wedge domain D1096_RS09360 PF03129 Anticodon binding domain D1096_RS09360 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D1096_RS09360 PF04073 Aminoacyl-tRNA editing domain D1096_RS09370 PF08281 Sigma-70, region 4 D1096_RS09370 PF04542 Sigma-70 region 2 D1096_RS09375 PF00174 Oxidoreductase molybdopterin binding domain D1096_RS09380 PF01794 Ferric reductase like transmembrane component D1096_RS09385 PF04545 Sigma-70, region 4 D1096_RS09385 PF04542 Sigma-70 region 2 D1096_RS09385 PF00140 Sigma-70 factor, region 1.2 D1096_RS09390 PF07690 Major Facilitator Superfamily D1096_RS09410 PF03590 Aspartate-ammonia ligase D1096_RS09415 PF01037 Lrp/AsnC ligand binding domain D1096_RS09415 PF13404 AsnC-type helix-turn-helix domain D1096_RS09420 PF01048 Phosphorylase superfamily D1096_RS09425 PF04345 Chorismate lyase D1096_RS09430 PF01177 Asp/Glu/Hydantoin racemase D1096_RS09460 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D1096_RS09460 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D1096_RS09470 PF00009 Elongation factor Tu GTP binding domain D1096_RS09475 PF01507 Phosphoadenosine phosphosulfate reductase family D1096_RS09480 PF01507 Phosphoadenosine phosphosulfate reductase family D1096_RS09485 PF14824 Sirohaem biosynthesis protein central D1096_RS09485 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D1096_RS09485 PF10414 Sirohaem synthase dimerisation region D1096_RS09495 PF00528 Binding-protein-dependent transport system inner membrane component D1096_RS09500 PF00528 Binding-protein-dependent transport system inner membrane component D1096_RS09505 PF17850 CysA C-terminal regulatory domain D1096_RS09505 PF12857 TOBE-like domain D1096_RS09505 PF00005 ABC transporter D1096_RS09510 PF01070 FMN-dependent dehydrogenase D1096_RS09515 PF03099 Biotin/lipoate A/B protein ligase family D1096_RS09515 PF02237 Biotin protein ligase C terminal domain D1096_RS09515 PF08279 HTH domain D1096_RS09520 PF01565 FAD binding domain D1096_RS09520 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain D1096_RS09525 PF01389 OmpA-like transmembrane domain D1096_RS09525 PF00691 OmpA family D1096_RS09535 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain D1096_RS09535 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain D1096_RS09540 PF04403 Paraquat-inducible protein A D1096_RS09545 PF01841 Transglutaminase-like superfamily D1096_RS09555 PF00403 Heavy-metal-associated domain D1096_RS09560 PF00465 Iron-containing alcohol dehydrogenase D1096_RS09565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1096_RS09565 PF03466 LysR substrate binding domain D1096_RS09570 PF00132 Bacterial transferase hexapeptide (six repeats) D1096_RS09570 PF14602 Hexapeptide repeat of succinyl-transferase D1096_RS09570 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal D1096_RS09575 PF01220 Dehydroquinase class II D1096_RS09580 PF04488 Glycosyltransferase sugar-binding region containing DXD motif D1096_RS09585 PF00364 Biotin-requiring enzyme D1096_RS09590 PF02785 Biotin carboxylase C-terminal domain D1096_RS09590 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D1096_RS09590 PF00289 Biotin carboxylase, N-terminal domain D1096_RS09595 PF12804 MobA-like NTP transferase domain D1096_RS09600 PF06288 Protein of unknown function (DUF1040) D1096_RS09605 PF01323 DSBA-like thioredoxin domain D1096_RS09615 PF05036 Sporulation related domain D1096_RS09615 PF05036 Sporulation related domain D1096_RS09620 PF04445 Putative SAM-dependent methyltransferase D1096_RS09625 PF02557 D-alanyl-D-alanine carboxypeptidase D1096_RS09630 PF07687 Peptidase dimerisation domain D1096_RS09630 PF01546 Peptidase family M20/M25/M40 D1096_RS09635 PF03960 ArsC family D1096_RS09645 PF00809 Pterin binding enzyme D1096_RS09650 PF01479 S4 domain D1096_RS09650 PF00849 RNA pseudouridylate synthase D1096_RS09660 PF05552 Conserved TM helix D1096_RS09660 PF00924 Mechanosensitive ion channel D1096_RS09665 PF02785 Biotin carboxylase C-terminal domain D1096_RS09665 PF00289 Biotin carboxylase, N-terminal domain D1096_RS09665 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D1096_RS09675 PF00675 Insulinase (Peptidase family M16) D1096_RS09675 PF05193 Peptidase M16 inactive domain D1096_RS09675 PF16187 Middle or third domain of peptidase_M16 D1096_RS09680 PF17946 RecC C-terminal domain D1096_RS09705 PF07977 FabA-like domain D1096_RS09710 PF13654 AAA domain D1096_RS09710 PF05362 Lon protease (S16) C-terminal proteolytic domain D1096_RS09715 PF06303 MatP N-terminal domain D1096_RS09715 PF17414 MatP C-terminal ribbon-helix-helix domain D1096_RS09720 PF00579 tRNA synthetases class I (W and Y) D1096_RS09725 PF13419 Haloacid dehalogenase-like hydrolase D1096_RS09735 PF01790 Prolipoprotein diacylglyceryl transferase D1096_RS09740 PF01925 Sulfite exporter TauE/SafE D1096_RS09745 PF00293 NUDIX domain D1096_RS09755 PF00719 Inorganic pyrophosphatase D1096_RS09760 PF05175 Methyltransferase small domain D1096_RS09765 PF03737 Aldolase/RraA D1096_RS09770 PF01226 Formate/nitrite transporter D1096_RS09790 PF00226 DnaJ domain D1096_RS09790 PF01556 DnaJ C terminal domain D1096_RS09790 PF00684 DnaJ central domain D1096_RS09795 PF00012 Hsp70 protein D1096_RS09800 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D1096_RS09800 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D1096_RS09810 PF13407 Periplasmic binding protein domain D1096_RS09815 PF00005 ABC transporter D1096_RS09820 PF02653 Branched-chain amino acid transport system / permease component D1096_RS09825 PF12833 Helix-turn-helix domain D1096_RS09830 PF05649 Peptidase family M13 D1096_RS09830 PF01431 Peptidase family M13 D1096_RS09835 PF10571 Uncharacterised protein family UPF0547 D1096_RS09840 PF00474 Sodium:solute symporter family D1096_RS09845 PF06196 Protein of unknown function (DUF997) D1096_RS09850 PF01340 Met Apo-repressor, MetJ D1096_RS09855 PF04333 MlaA lipoprotein D1096_RS09860 PF01263 Aldose 1-epimerase D1096_RS09875 PF14883 Hypothetical glycosyl hydrolase family 13 D1096_RS09875 PF01522 Polysaccharide deacetylase D1096_RS09880 PF00535 Glycosyl transferase family 2 D1096_RS09890 PF00121 Triosephosphate isomerase D1096_RS09895 PF01142 tRNA pseudouridine synthase D (TruD) D1096_RS09900 PF01975 Survival protein SurE D1096_RS09905 PF09335 SNARE associated Golgi protein D1096_RS09920 PF01551 Peptidase family M23 D1096_RS09920 PF01476 LysM domain D1096_RS09925 PF03352 Methyladenine glycosylase D1096_RS09935 PF07670 Nucleoside recognition D1096_RS09940 PF07670 Nucleoside recognition D1096_RS09945 PF00762 Ferrochelatase D1096_RS09950 PF00468 Ribosomal protein L34 D1096_RS09955 PF00825 Ribonuclease P D1096_RS09960 PF01809 Putative membrane protein insertion efficiency factor D1096_RS09965 PF00120 Glutamine synthetase, catalytic domain D1096_RS09965 PF03951 Glutamine synthetase, beta-Grasp domain D1096_RS09970 PF00149 Calcineurin-like phosphoesterase D1096_RS09975 PF00293 NUDIX domain D1096_RS09980 PF06146 Phosphate-starvation-inducible E D1096_RS09985 PF01648 4'-phosphopantetheinyl transferase superfamily D1096_RS09990 PF00892 EamA-like transporter family D1096_RS09995 PF06965 Na+/H+ antiporter 1 D1096_RS10005 PF02580 D-Tyr-tRNA(Tyr) deacylase D1096_RS10010 PF03631 Virulence factor BrkB D1096_RS10015 PF00171 Aldehyde dehydrogenase family D1096_RS10025 PF00593 TonB dependent receptor D1096_RS10025 PF07715 TonB-dependent Receptor Plug Domain D1096_RS10045 PF01119 DNA mismatch repair protein, C-terminal domain D1096_RS10045 PF08676 MutL C terminal dimerisation domain D1096_RS10050 PF08240 Alcohol dehydrogenase GroES-like domain D1096_RS10050 PF00107 Zinc-binding dehydrogenase D1096_RS10060 PF17209 Hfq protein D1096_RS10065 PF16360 GTP-binding GTPase Middle Region D1096_RS10065 PF13167 GTP-binding GTPase N-terminal D1096_RS10065 PF01926 50S ribosome-binding GTPase D1096_RS10070 PF03641 Possible lysine decarboxylase D1096_RS10075 PF03819 MazG nucleotide pyrophosphohydrolase domain D1096_RS10080 PF13545 Crp-like helix-turn-helix domain D1096_RS10080 PF00027 Cyclic nucleotide-binding domain D1096_RS10085 PF06794 Uncharacterised protein family (UPF0270) D1096_RS10090 PF00440 Bacterial regulatory proteins, tetR family D1096_RS10095 PF00692 dUTPase D1096_RS10100 PF04127 DNA / pantothenate metabolism flavoprotein D1096_RS10100 PF02441 Flavoprotein D1096_RS10105 PF04002 RadC-like JAB domain D1096_RS10110 PF00830 Ribosomal L28 family D1096_RS10115 PF00471 Ribosomal protein L33 D1096_RS10125 PF00202 Aminotransferase class-III D1096_RS10130 PF00282 Pyridoxal-dependent decarboxylase conserved domain D1096_RS10135 PF01206 Sulfurtransferase TusA D1096_RS10140 PF04143 Sulphur transport D1096_RS10145 PF04219 Protein of unknown function, DUF D1096_RS10150 PF05958 tRNA (Uracil-5-)-methyltransferase D1096_RS10165 PF01544 CorA-like Mg2+ transporter protein D1096_RS10170 PF01209 ubiE/COQ5 methyltransferase family D1096_RS10180 PF03109 ABC1 family D1096_RS10185 PF02416 mttA/Hcf106 family D1096_RS10195 PF00902 Sec-independent protein translocase protein (TatC) D1096_RS10200 PF00490 Delta-aminolevulinic acid dehydratase D1096_RS10210 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain D1096_RS10210 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain D1096_RS10210 PF06827 Zinc finger found in FPG and IleRS D1096_RS10215 PF05525 Branched-chain amino acid transport protein D1096_RS10225 PF00698 Acyl transferase domain D1096_RS10230 PF02677 Epoxyqueuosine reductase QueH D1096_RS10235 PF00348 Polyprenyl synthetase D1096_RS10245 PF03358 NADPH-dependent FMN reductase D1096_RS10250 PF07681 DoxX D1096_RS10255 PF00829 Ribosomal prokaryotic L21 protein D1096_RS10260 PF01016 Ribosomal L27 protein D1096_RS10265 PF00892 EamA-like transporter family D1096_RS10270 PF04575 Protein of unknown function (DUF560) D1096_RS10275 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D1096_RS10280 PF00156 Phosphoribosyl transferase domain D1096_RS10285 PF08468 Methyltransferase small domain N-terminal D1096_RS10285 PF05175 Methyltransferase small domain D1096_RS10295 PF00583 Acetyltransferase (GNAT) family D1096_RS10300 PF00271 Helicase conserved C-terminal domain D1096_RS10300 PF00270 DEAD/DEAH box helicase D1096_RS10305 PF01243 Pyridoxamine 5'-phosphate oxidase D1096_RS10305 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region D1096_RS10310 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D1096_RS10315 PF00171 Aldehyde dehydrogenase family D1096_RS10320 PF01184 GPR1/FUN34/yaaH family D1096_RS10325 PF00005 ABC transporter D1096_RS10330 PF01497 Periplasmic binding protein D1096_RS10335 PF01032 FecCD transport family D1096_RS10340 PF07715 TonB-dependent Receptor Plug Domain D1096_RS10340 PF00593 TonB dependent receptor D1096_RS10350 PF01259 SAICAR synthetase D1096_RS10355 PF01634 ATP phosphoribosyltransferase D1096_RS10355 PF08029 HisG, C-terminal domain D1096_RS10360 PF00815 Histidinol dehydrogenase D1096_RS10365 PF00155 Aminotransferase class I and II D1096_RS10375 PF00475 Imidazoleglycerol-phosphate dehydratase D1096_RS10385 PF00117 Glutamine amidotransferase class-I D1096_RS10390 PF00977 Histidine biosynthesis protein D1096_RS10395 PF00977 Histidine biosynthesis protein D1096_RS10400 PF01502 Phosphoribosyl-AMP cyclohydrolase D1096_RS10400 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase D1096_RS10405 PF02592 Putative vitamin uptake transporter D1096_RS10410 PF00557 Metallopeptidase family M24 D1096_RS10425 PF13407 Periplasmic binding protein domain D1096_RS10425 PF00356 Bacterial regulatory proteins, lacI family D1096_RS10430 PF08244 Glycosyl hydrolases family 32 C terminal D1096_RS10430 PF00251 Glycosyl hydrolases family 32 N-terminal domain D1096_RS10435 PF00294 pfkB family carbohydrate kinase D1096_RS10440 PF07732 Multicopper oxidase D1096_RS10445 PF02687 FtsX-like permease family D1096_RS10445 PF12704 MacB-like periplasmic core domain D1096_RS10450 PF00005 ABC transporter D1096_RS10455 PF02687 FtsX-like permease family D1096_RS10455 PF12704 MacB-like periplasmic core domain D1096_RS10460 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D1096_RS10460 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D1096_RS10465 PF00793 DAHP synthetase I family D1096_RS10470 PF13369 Transglutaminase-like superfamily D1096_RS10475 PF13847 Methyltransferase domain D1096_RS10475 PF17827 PrmC N-terminal domain D1096_RS10485 PF03462 PCRF domain D1096_RS10485 PF00472 RF-1 domain D1096_RS10490 PF00581 Rhodanese-like domain D1096_RS10495 PF04143 Sulphur transport