locus-tag class description D1100_RS00005 PF00308 Bacterial dnaA protein D1100_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix D1100_RS00005 PF11638 DnaA N-terminal domain D1100_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain D1100_RS00010 PF02767 DNA polymerase III beta subunit, central domain D1100_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain D1100_RS00015 PF02463 RecF/RecN/SMC N terminal domain D1100_RS00020 PF00080 Copper/zinc superoxide dismutase (SODC) D1100_RS00025 PF02774 Semialdehyde dehydrogenase, dimerisation domain D1100_RS00025 PF01118 Semialdehyde dehydrogenase, NAD binding domain D1100_RS00035 PF02684 Lipid-A-disaccharide synthetase D1100_RS00040 PF01343 Peptidase family S49 D1100_RS00040 PF08496 Peptidase family S49 N-terminal D1100_RS00045 PF02381 MraZ protein, putative antitoxin-like D1100_RS00050 PF01795 MraW methylase family D1100_RS00055 PF04999 Cell division protein FtsL D1100_RS00060 PF00905 Penicillin binding protein transpeptidase domain D1100_RS00060 PF03717 Penicillin-binding Protein dimerisation domain D1100_RS00065 PF01225 Mur ligase family, catalytic domain D1100_RS00065 PF02875 Mur ligase family, glutamate ligase domain D1100_RS00065 PF08245 Mur ligase middle domain D1100_RS00070 PF01225 Mur ligase family, catalytic domain D1100_RS00070 PF02875 Mur ligase family, glutamate ligase domain D1100_RS00070 PF08245 Mur ligase middle domain D1100_RS00075 PF00953 Glycosyl transferase family 4 D1100_RS00075 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 D1100_RS00080 PF02875 Mur ligase family, glutamate ligase domain D1100_RS00080 PF08245 Mur ligase middle domain D1100_RS00085 PF01098 Cell cycle protein D1100_RS00090 PF04101 Glycosyltransferase family 28 C-terminal domain D1100_RS00090 PF03033 Glycosyltransferase family 28 N-terminal domain D1100_RS00095 PF01225 Mur ligase family, catalytic domain D1100_RS00095 PF02875 Mur ligase family, glutamate ligase domain D1100_RS00095 PF08245 Mur ligase middle domain D1100_RS00100 PF01820 D-ala D-ala ligase N-terminus D1100_RS00100 PF07478 D-ala D-ala ligase C-terminus D1100_RS00105 PF03799 Cell division protein FtsQ D1100_RS00105 PF08478 POTRA domain, FtsQ-type D1100_RS00110 PF02491 SHS2 domain inserted in FTSA D1100_RS00115 PF12327 FtsZ family, C-terminal domain D1100_RS00115 PF00091 Tubulin/FtsZ family, GTPase domain D1100_RS00120 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase D1100_RS00125 PF02463 RecF/RecN/SMC N terminal domain D1100_RS00130 PF00005 ABC transporter D1100_RS00130 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D1100_RS00135 PF00528 Binding-protein-dependent transport system inner membrane component D1100_RS00135 PF12911 N-terminal TM domain of oligopeptide transport permease C D1100_RS00140 PF00528 Binding-protein-dependent transport system inner membrane component D1100_RS00145 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D1100_RS00150 PF16658 Class II release factor RF3, C-terminal domain D1100_RS00150 PF03144 Elongation factor Tu domain 2 D1100_RS00150 PF00009 Elongation factor Tu GTP binding domain D1100_RS00165 PF01195 Peptidyl-tRNA hydrolase D1100_RS00170 PF01926 50S ribosome-binding GTPase D1100_RS00170 PF06071 Protein of unknown function (DUF933) D1100_RS00185 PF05433 Glycine zipper 2TM domain D1100_RS00190 PF06185 YecM protein D1100_RS00195 PF03485 Arginyl tRNA synthetase N terminal domain D1100_RS00195 PF05746 DALR anticodon binding domain D1100_RS00195 PF00750 tRNA synthetases class I (R) D1100_RS00200 PF01018 GTP1/OBG D1100_RS00200 PF01926 50S ribosome-binding GTPase D1100_RS00205 PF10786 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) D1100_RS00210 PF00588 SpoU rRNA Methylase family D1100_RS00210 PF08032 RNA 2'-O ribose methyltransferase substrate binding D1100_RS00215 PF13091 PLD-like domain D1100_RS00220 PF08264 Anticodon-binding domain of tRNA D1100_RS00220 PF00133 tRNA synthetases class I (I, L, M and V) D1100_RS00220 PF06827 Zinc finger found in FPG and IleRS D1100_RS00225 PF01687 Riboflavin kinase D1100_RS00225 PF06574 FAD synthetase D1100_RS00230 PF13521 AAA domain D1100_RS00230 PF01467 Cytidylyltransferase-like D1100_RS00235 PF00149 Calcineurin-like phosphoesterase D1100_RS00240 PF00072 Response regulator receiver domain D1100_RS00240 PF00486 Transcriptional regulatory protein, C terminal D1100_RS00255 PF01168 Alanine racemase, N-terminal domain D1100_RS00265 PF03144 Elongation factor Tu domain 2 D1100_RS00265 PF00679 Elongation factor G C-terminus D1100_RS00265 PF00009 Elongation factor Tu GTP binding domain D1100_RS00270 PF00462 Glutaredoxin D1100_RS00275 PF01138 3' exoribonuclease family, domain 1 D1100_RS00275 PF03725 3' exoribonuclease family, domain 2 D1100_RS00280 PF08340 Domain of unknown function (DUF1732) D1100_RS00280 PF03755 YicC-like family, N-terminal region D1100_RS00285 PF01571 Aminomethyltransferase folate-binding domain D1100_RS00290 PF00037 4Fe-4S binding domain D1100_RS00295 PF00196 Bacterial regulatory proteins, luxR family D1100_RS00295 PF00072 Response regulator receiver domain D1100_RS00300 PF01170 Putative RNA methylase family UPF0020 D1100_RS00300 PF02926 THUMP domain D1100_RS00300 PF10672 S-adenosylmethionine-dependent methyltransferase D1100_RS00305 PF00588 SpoU rRNA Methylase family D1100_RS00310 PF00923 Transaldolase/Fructose-6-phosphate aldolase D1100_RS00345 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D1100_RS00350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D1100_RS00355 PF00528 Binding-protein-dependent transport system inner membrane component D1100_RS00360 PF00528 Binding-protein-dependent transport system inner membrane component D1100_RS00360 PF12911 N-terminal TM domain of oligopeptide transport permease C D1100_RS00365 PF00005 ABC transporter D1100_RS00365 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D1100_RS00370 PF00005 ABC transporter D1100_RS00370 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D1100_RS00375 PF06146 Phosphate-starvation-inducible E D1100_RS00385 PF01042 Endoribonuclease L-PSP D1100_RS00390 PF01063 Amino-transferase class IV D1100_RS00395 PF00462 Glutaredoxin D1100_RS00400 PF02132 RecR protein D1100_RS00400 PF13662 Toprim domain D1100_RS00405 PF02575 YbaB/EbfC DNA-binding family D1100_RS00410 PF03544 Gram-negative bacterial TonB protein C-terminal D1100_RS00415 PF02472 Biopolymer transport protein ExbD/TolR D1100_RS00420 PF01618 MotA/TolQ/ExbB proton channel family D1100_RS00425 PF00581 Rhodanese-like domain D1100_RS00435 PF03610 PTS system fructose IIA component D1100_RS00435 PF05524 PEP-utilising enzyme, N-terminal D1100_RS00435 PF00391 PEP-utilising enzyme, mobile domain D1100_RS00435 PF00381 PTS HPr component phosphorylation site D1100_RS00440 PF02734 DAK2 domain D1100_RS00445 PF02733 Dak1 domain D1100_RS00450 PF07992 Pyridine nucleotide-disulphide oxidoreductase D1100_RS00455 PF02348 Cytidylyltransferase D1100_RS00460 PF06078 Bacterial protein of unknown function (DUF937) D1100_RS00465 PF00293 NUDIX domain D1100_RS00465 PF09297 NADH pyrophosphatase zinc ribbon domain D1100_RS00470 PF00849 RNA pseudouridylate synthase D1100_RS00480 PF04186 FxsA cytoplasmic membrane protein D1100_RS00485 PF00557 Metallopeptidase family M24 D1100_RS00490 PF01206 Sulfurtransferase TusA D1100_RS00495 PF06877 Regulator of ribonuclease activity B D1100_RS00500 PF01926 50S ribosome-binding GTPase D1100_RS00510 PF02535 ZIP Zinc transporter D1100_RS00515 PF00920 Dehydratase family D1100_RS00525 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D1100_RS00525 PF00205 Thiamine pyrophosphate enzyme, central domain D1100_RS00525 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D1100_RS00530 PF02335 Cytochrome c552 D1100_RS00540 PF13247 4Fe-4S dicluster domain D1100_RS00545 PF03916 Polysulphide reductase, NrfD D1100_RS00550 PF05662 Coiled stalk of trimeric autotransporter adhesin D1100_RS00550 PF05658 Head domain of trimeric autotransporter adhesin D1100_RS00550 PF03895 YadA-like membrane anchor domain D1100_RS00550 PF13018 Extended Signal Peptide of Type V secretion system D1100_RS00550 PF03895 YadA-like membrane anchor domain D1100_RS00550 PF05658 Head domain of trimeric autotransporter adhesin D1100_RS00550 PF13018 Extended Signal Peptide of Type V secretion system D1100_RS00550 PF05662 Coiled stalk of trimeric autotransporter adhesin D1100_RS00555 PF00860 Permease family D1100_RS00560 PF18327 Proline utilization A proline dehydrogenase N-terminal domain D1100_RS00560 PF14850 DNA-binding domain of Proline dehydrogenase D1100_RS00560 PF00171 Aldehyde dehydrogenase family D1100_RS00560 PF01619 Proline dehydrogenase D1100_RS00565 PF00474 Sodium:solute symporter family D1100_RS00570 PF09339 IclR helix-turn-helix domain D1100_RS00570 PF01614 Bacterial transcriptional regulator D1100_RS00575 PF01812 5-formyltetrahydrofolate cyclo-ligase family D1100_RS00585 PF05164 Cell division protein ZapA D1100_RS00590 PF03695 Uncharacterised protein family (UPF0149) D1100_RS00595 PF01208 Uroporphyrinogen decarboxylase (URO-D) D1100_RS00600 PF04222 Protein of unknown function (DUF416) D1100_RS00605 PF00216 Bacterial DNA-binding protein D1100_RS00610 PF00303 Thymidylate synthase D1100_RS00620 PF06968 Biotin and Thiamin Synthesis associated domain D1100_RS00620 PF04055 Radical SAM superfamily D1100_RS00625 PF00313 'Cold-shock' DNA-binding domain D1100_RS00630 PF04352 ProQ/FINO family D1100_RS00635 PF17804 Tail specific protease N-terminal domain D1100_RS00635 PF03572 Peptidase family S41 D1100_RS00635 PF11818 C-terminal domain of tail specific protease (DUF3340) D1100_RS00635 PF00595 PDZ domain D1100_RS00640 PF03734 L,D-transpeptidase catalytic domain D1100_RS00645 PF05951 Bacterial protein of unknown function (DUF882) D1100_RS00650 PF00753 Metallo-beta-lactamase superfamily D1100_RS00665 PF01230 HIT domain D1100_RS00670 PF00950 ABC 3 transport family D1100_RS00675 PF00950 ABC 3 transport family D1100_RS00680 PF01351 Ribonuclease HII D1100_RS00685 PF03193 RsgA GTPase D1100_RS00690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1100_RS00690 PF03466 LysR substrate binding domain D1100_RS00695 PF13419 Haloacid dehalogenase-like hydrolase D1100_RS00700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1100_RS00700 PF03466 LysR substrate binding domain D1100_RS00710 PF17763 Glutaminase/Asparaginase C-terminal domain D1100_RS00710 PF00710 Asparaginase, N-terminal D1100_RS00715 PF00117 Glutamine amidotransferase class-I D1100_RS00715 PF06418 CTP synthase N-terminus D1100_RS00720 PF10063 Uncharacterized integral membrane protein (DUF2301) D1100_RS00725 PF00694 Aconitase C-terminal domain D1100_RS00730 PF00330 Aconitase family (aconitate hydratase) D1100_RS00735 PF05651 Putative sugar diacid recognition D1100_RS00735 PF17853 GGDEF-like domain D1100_RS00735 PF13556 PucR C-terminal helix-turn-helix domain D1100_RS00740 PF02447 GntP family permease D1100_RS00745 PF02595 Glycerate kinase family D1100_RS00750 PF00708 Acylphosphatase D1100_RS00755 PF11398 Protein of unknown function (DUF2813) D1100_RS00760 PF11892 Domain of unknown function (DUF3412) D1100_RS00760 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases D1100_RS00760 PF03641 Possible lysine decarboxylase D1100_RS00765 PF01207 Dihydrouridine synthase (Dus) D1100_RS00775 PF02867 Ribonucleotide reductase, barrel domain D1100_RS00775 PF00317 Ribonucleotide reductase, all-alpha domain D1100_RS00775 PF03477 ATP cone domain D1100_RS00780 PF01521 Iron-sulphur cluster biosynthesis D1100_RS00780 PF01106 NifU-like domain D1100_RS00785 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) D1100_RS00785 PF11973 NQRA C-terminal domain D1100_RS00790 PF03116 NQR2, RnfD, RnfE family D1100_RS00795 PF04205 FMN-binding domain D1100_RS00800 PF02508 Rnf-Nqr subunit, membrane protein D1100_RS00805 PF02508 Rnf-Nqr subunit, membrane protein D1100_RS00810 PF00970 Oxidoreductase FAD-binding domain D1100_RS00810 PF00111 2Fe-2S iron-sulfur cluster binding domain D1100_RS00810 PF00175 Oxidoreductase NAD-binding domain D1100_RS00815 PF02424 ApbE family D1100_RS00820 PF04400 (Na+)-NQR maturation NqrM D1100_RS00830 PF12832 MFS_1 like family D1100_RS00835 PF03807 NADP oxidoreductase coenzyme F420-dependent D1100_RS00835 PF14748 Pyrroline-5-carboxylate reductase dimerisation D1100_RS00840 PF04381 Putative exonuclease, RdgC D1100_RS00845 PF13419 Haloacid dehalogenase-like hydrolase D1100_RS00865 PF00665 Integrase core domain D1100_RS00865 PF13936 Helix-turn-helix domain D1100_RS00870 PF02508 Rnf-Nqr subunit, membrane protein D1100_RS00875 PF04060 Putative Fe-S cluster D1100_RS00880 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit D1100_RS00880 PF12838 4Fe-4S dicluster domain D1100_RS00880 PF13375 RnfC Barrel sandwich hybrid domain D1100_RS00885 PF03458 UPF0126 domain D1100_RS00890 PF03116 NQR2, RnfD, RnfE family D1100_RS00895 PF04205 FMN-binding domain D1100_RS00900 PF02508 Rnf-Nqr subunit, membrane protein D1100_RS00905 PF03279 Bacterial lipid A biosynthesis acyltransferase D1100_RS00920 PF01258 Prokaryotic dksA/traR C4-type zinc finger D1100_RS00925 PF01743 Poly A polymerase head domain D1100_RS00925 PF12626 Polymerase A arginine-rich C-terminus D1100_RS00925 PF12627 Probable RNA and SrmB- binding site of polymerase A D1100_RS00930 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) D1100_RS00940 PF11739 Dicarboxylate transport D1100_RS00950 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D1100_RS00955 PF00929 Exonuclease D1100_RS00965 PF01817 Chorismate mutase type II D1100_RS00965 PF02153 Prephenate dehydrogenase D1100_RS00970 PF00793 DAHP synthetase I family D1100_RS00975 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D1100_RS00980 PF02887 Pyruvate kinase, alpha/beta domain D1100_RS00980 PF00224 Pyruvate kinase, barrel domain D1100_RS00985 PF00300 Histidine phosphatase superfamily (branch 1) D1100_RS00990 PF01207 Dihydrouridine synthase (Dus) D1100_RS00995 PF02954 Bacterial regulatory protein, Fis family D1100_RS01000 PF00209 Sodium:neurotransmitter symporter family D1100_RS01005 PF02086 D12 class N6 adenine-specific DNA methyltransferase D1100_RS01010 PF01761 3-dehydroquinate synthase D1100_RS01015 PF01202 Shikimate kinase D1100_RS01020 PF17092 Penicillin-binding protein OB-like domain D1100_RS01020 PF00912 Transglycosylase D1100_RS01020 PF00905 Penicillin binding protein transpeptidase domain D1100_RS01025 PF11104 Type IV pilus assembly protein PilM; D1100_RS01045 PF03958 Bacterial type II/III secretion system short domain D1100_RS01045 PF00263 Bacterial type II and III secretion system protein D1100_RS01050 PF01029 NusB family D1100_RS01055 PF02769 AIR synthase related protein, C-terminal domain D1100_RS01055 PF00586 AIR synthase related protein, N-terminal domain D1100_RS01060 PF04608 Phosphatidylglycerophosphatase A D1100_RS01065 PF01810 LysE type translocator D1100_RS01070 PF00588 SpoU rRNA Methylase family D1100_RS01070 PF08032 RNA 2'-O ribose methyltransferase substrate binding D1100_RS01075 PF00459 Inositol monophosphatase family D1100_RS01090 PF00464 Serine hydroxymethyltransferase D1100_RS01095 PF01513 ATP-NAD kinase D1100_RS01100 PF18019 HD domain D1100_RS01105 PF01867 CRISPR associated protein Cas1 D1100_RS01115 PF09615 CRISPR-associated protein (Cas_Csy3) D1100_RS01120 PF09614 CRISPR-associated protein (Cas_Csy2) D1100_RS01130 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D1100_RS01130 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D1100_RS01130 PF03129 Anticodon binding domain D1100_RS01130 PF02824 TGS domain D1100_RS01135 PF03783 Curli production assembly/transport component CsgG D1100_RS01145 PF05643 Putative bacterial lipoprotein (DUF799) D1100_RS01150 PF05198 Translation initiation factor IF-3, N-terminal domain D1100_RS01150 PF00707 Translation initiation factor IF-3, C-terminal domain D1100_RS01155 PF01632 Ribosomal protein L35 D1100_RS01160 PF00453 Ribosomal protein L20 D1100_RS01175 PF00571 CBS domain D1100_RS01175 PF01595 Cyclin M transmembrane N-terminal domain D1100_RS01175 PF03471 Transporter associated domain D1100_RS01180 PF00849 RNA pseudouridylate synthase D1100_RS01185 PF00300 Histidine phosphatase superfamily (branch 1) D1100_RS01190 PF03652 Holliday junction resolvase D1100_RS01195 PF02622 Uncharacterized ACR, COG1678 D1100_RS01200 PF04452 RNA methyltransferase D1100_RS01210 PF01722 BolA-like protein D1100_RS01235 PF02810 SEC-C motif D1100_RS01235 PF07517 SecA DEAD-like domain D1100_RS01235 PF07516 SecA Wing and Scaffold domain D1100_RS01235 PF01043 SecA preprotein cross-linking domain D1100_RS01245 PF00293 NUDIX domain D1100_RS01250 PF01118 Semialdehyde dehydrogenase, NAD binding domain D1100_RS01255 PF00696 Amino acid kinase family D1100_RS01260 PF00202 Aminotransferase class-III D1100_RS01270 PF17484 N-Lobe handle Tf-binding protein B D1100_RS01270 PF17483 C-lobe handle domain of Tf-binding protein B D1100_RS01270 PF01298 C-lobe and N-lobe beta barrels of Tf-binding protein B D1100_RS01275 PF07715 TonB-dependent Receptor Plug Domain D1100_RS01275 PF00593 TonB dependent receptor D1100_RS01280 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D1100_RS01280 PF07498 Rho termination factor, N-terminal domain D1100_RS01280 PF07497 Rho termination factor, RNA-binding domain D1100_RS01285 PF00291 Pyridoxal-phosphate dependent enzyme D1100_RS01290 PF00288 GHMP kinases N terminal domain D1100_RS01290 PF08544 GHMP kinases C terminal D1100_RS01295 PF00696 Amino acid kinase family D1100_RS01295 PF01842 ACT domain D1100_RS01295 PF13840 ACT domain D1100_RS01295 PF03447 Homoserine dehydrogenase, NAD binding domain D1100_RS01295 PF00742 Homoserine dehydrogenase D1100_RS01300 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain D1100_RS01300 PF02777 Iron/manganese superoxide dismutases, C-terminal domain D1100_RS01305 PF01168 Alanine racemase, N-terminal domain D1100_RS01305 PF00842 Alanine racemase, C-terminal domain D1100_RS01310 PF13538 UvrD-like helicase C-terminal domain D1100_RS01340 PF07687 Peptidase dimerisation domain D1100_RS01340 PF01546 Peptidase family M20/M25/M40 D1100_RS01345 PF00156 Phosphoribosyl transferase domain D1100_RS01350 PF00625 Guanylate kinase D1100_RS01355 PF02321 Outer membrane efflux protein D1100_RS01360 PF03658 RnfH family Ubiquitin D1100_RS01365 PF03364 Polyketide cyclase / dehydrase and lipid transport D1100_RS01370 PF00005 ABC transporter D1100_RS01370 PF03459 TOBE domain D1100_RS01375 PF00528 Binding-protein-dependent transport system inner membrane component D1100_RS01385 PF01061 ABC-2 type transporter D1100_RS01390 PF00005 ABC transporter D1100_RS01395 PF12169 DNA polymerase III subunits gamma and tau domain III D1100_RS01395 PF12170 DNA polymerase III tau subunit V interacting with alpha D1100_RS01400 PF00156 Phosphoribosyl transferase domain D1100_RS01410 PF01042 Endoribonuclease L-PSP D1100_RS01420 PF04073 Aminoacyl-tRNA editing domain D1100_RS01425 PF00005 ABC transporter D1100_RS01430 PF01297 Zinc-uptake complex component A periplasmic D1100_RS01435 PF04358 DsrC like protein D1100_RS01440 PF01027 Inhibitor of apoptosis-promoting Bax1 D1100_RS01445 PF01066 CDP-alcohol phosphatidyltransferase D1100_RS01455 PF01541 GIY-YIG catalytic domain D1100_RS01455 PF02151 UvrB/uvrC motif D1100_RS01455 PF08459 UvrC Helix-hairpin-helix N-terminal D1100_RS01460 PF01026 TatD related DNase D1100_RS01465 PF00580 UvrD/REP helicase N-terminal domain D1100_RS01465 PF13361 UvrD-like helicase C-terminal domain D1100_RS01470 PF08402 TOBE domain D1100_RS01470 PF00005 ABC transporter D1100_RS01475 PF00528 Binding-protein-dependent transport system inner membrane component D1100_RS01480 PF00528 Binding-protein-dependent transport system inner membrane component D1100_RS01490 PF01330 RuvA N terminal domain D1100_RS01490 PF07499 RuvA, C-terminal domain D1100_RS01495 PF17864 RuvB AAA lid domain D1100_RS01495 PF05491 RuvB C-terminal winged helix domain D1100_RS01495 PF05496 Holliday junction DNA helicase RuvB P-loop domain D1100_RS01505 PF03989 DNA gyrase C-terminal domain, beta-propeller D1100_RS01505 PF00521 DNA gyrase/topoisomerase IV, subunit A D1100_RS01510 PF12161 HsdM N-terminal domain D1100_RS01510 PF02384 N-6 DNA Methylase D1100_RS01530 PF01420 Type I restriction modification DNA specificity domain D1100_RS01540 PF18766 SWI2/SNF2 ATPase D1100_RS01540 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) D1100_RS01540 PF12008 Type I restriction and modification enzyme - subunit R C terminal D1100_RS01545 PF00005 ABC transporter D1100_RS01545 PF12848 ABC transporter D1100_RS01545 PF16326 ABC transporter C-terminal domain D1100_RS01550 PF00899 ThiF family D1100_RS01555 PF17274 Family of unknown function (DUF5339) D1100_RS01560 PF01654 Cytochrome bd terminal oxidase subunit I D1100_RS01565 PF02322 Cytochrome bd terminal oxidase subunit II D1100_RS01580 PF03061 Thioesterase superfamily D1100_RS01585 PF01618 MotA/TolQ/ExbB proton channel family D1100_RS01590 PF02472 Biopolymer transport protein ExbD/TolR D1100_RS01595 PF06519 TolA C-terminal D1100_RS01595 PF06519 TolA C-terminal D1100_RS01600 PF07676 WD40-like Beta Propeller Repeat D1100_RS01600 PF04052 TolB amino-terminal domain D1100_RS01605 PF00691 OmpA family D1100_RS01615 PF00226 DnaJ domain D1100_RS01615 PF05099 Tellurite resistance protein TerB D1100_RS01620 PF01207 Dihydrouridine synthase (Dus) D1100_RS01625 PF05128 Domain of unknown function (DUF697) D1100_RS01630 PF00005 ABC transporter D1100_RS01630 PF12848 ABC transporter D1100_RS01640 PF00994 Probable molybdopterin binding domain D1100_RS01640 PF03454 MoeA C-terminal region (domain IV) D1100_RS01640 PF03453 MoeA N-terminal region (domain I and II) D1100_RS01645 PF00899 ThiF family D1100_RS01655 PF01938 TRAM domain D1100_RS01655 PF05958 tRNA (Uracil-5-)-methyltransferase D1100_RS01660 PF01966 HD domain D1100_RS01660 PF13286 Phosphohydrolase-associated domain D1100_RS01665 PF00176 SNF2 family N-terminal domain D1100_RS01665 PF18337 RapA N-terminal Tudor like domain D1100_RS01665 PF18339 RapA N-terminal Tudor like domain 1 D1100_RS01665 PF12137 RNA polymerase recycling family C-terminal D1100_RS01665 PF00271 Helicase conserved C-terminal domain D1100_RS01670 PF00849 RNA pseudouridylate synthase D1100_RS01675 PF01510 N-acetylmuramoyl-L-alanine amidase D1100_RS01680 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ D1100_RS01685 PF00156 Phosphoribosyl transferase domain D1100_RS01690 PF01717 Cobalamin-independent synthase, Catalytic domain D1100_RS01695 PF01053 Cys/Met metabolism PLP-dependent enzyme D1100_RS01700 PF02600 Disulfide bond formation protein DsbB D1100_RS01705 PF06450 Bacterial Na+/H+ antiporter B (NhaB) D1100_RS01710 PF00392 Bacterial regulatory proteins, gntR family D1100_RS01710 PF07840 FadR C-terminal domain D1100_RS01715 PF02562 PhoH-like protein D1100_RS01735 PF00293 NUDIX domain D1100_RS01740 PF01494 FAD binding domain D1100_RS01760 PF01494 FAD binding domain D1100_RS01765 PF03668 P-loop ATPase protein family D1100_RS01770 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D1100_RS01775 PF00005 ABC transporter D1100_RS01775 PF12399 Branched-chain amino acid ATP-binding cassette transporter D1100_RS01780 PF03968 OstA-like protein D1100_RS01790 PF00311 Phosphoenolpyruvate carboxylase D1100_RS01795 PF04536 TPM domain D1100_RS01805 PF04011 LemA family D1100_RS01810 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D1100_RS01815 PF00294 pfkB family carbohydrate kinase D1100_RS01820 PF00381 PTS HPr component phosphorylation site D1100_RS01820 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D1100_RS01825 PF00128 Alpha amylase, catalytic domain D1100_RS01825 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D1100_RS01825 PF02806 Alpha amylase, C-terminal all-beta domain D1100_RS01830 PF18390 Glycogen debranching enzyme C-terminal domain D1100_RS01830 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D1100_RS01830 PF00128 Alpha amylase, catalytic domain D1100_RS01835 PF00483 Nucleotidyl transferase D1100_RS01840 PF00534 Glycosyl transferases group 1 D1100_RS01840 PF08323 Starch synthase catalytic domain D1100_RS01845 PF00343 Carbohydrate phosphorylase D1100_RS01850 PF00334 Nucleoside diphosphate kinase D1100_RS01855 PF08264 Anticodon-binding domain of tRNA D1100_RS01855 PF09334 tRNA synthetases class I (M) D1100_RS01855 PF01588 Putative tRNA binding domain D1100_RS01860 PF13378 Enolase C-terminal domain-like D1100_RS01870 PF01479 S4 domain D1100_RS01870 PF00849 RNA pseudouridylate synthase D1100_RS01875 PF07690 Major Facilitator Superfamily D1100_RS01890 PF01261 Xylose isomerase-like TIM barrel D1100_RS01895 PF00877 NlpC/P60 family D1100_RS01900 PF00717 Peptidase S24-like D1100_RS01905 PF01228 Glycine radical D1100_RS01910 PF03167 Uracil DNA glycosylase superfamily D1100_RS01915 PF04393 Protein of unknown function (DUF535) D1100_RS01920 PF03797 Autotransporter beta-domain D1100_RS01920 PF00082 Subtilase family D1100_RS01925 PF00270 DEAD/DEAH box helicase D1100_RS01925 PF04408 Helicase associated domain (HA2) D1100_RS01925 PF00271 Helicase conserved C-terminal domain D1100_RS01925 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold D1100_RS01925 PF11898 Domain of unknown function (DUF3418) D1100_RS01930 PF04284 Protein of unknown function (DUF441) D1100_RS01935 PF01025 GrpE D1100_RS01940 PF13416 Bacterial extracellular solute-binding protein D1100_RS01945 PF01554 MatE D1100_RS01950 PF12705 PD-(D/E)XK nuclease superfamily D1100_RS01950 PF00580 UvrD/REP helicase N-terminal domain D1100_RS01950 PF13361 UvrD-like helicase C-terminal domain D1100_RS01955 PF00795 Carbon-nitrogen hydrolase D1100_RS01960 PF00571 CBS domain D1100_RS01960 PF03471 Transporter associated domain D1100_RS01965 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) D1100_RS01970 PF00230 Major intrinsic protein D1100_RS01975 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D1100_RS01975 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D1100_RS01980 PF05362 Lon protease (S16) C-terminal proteolytic domain D1100_RS01980 PF02190 ATP-dependent protease La (LON) substrate-binding domain D1100_RS01980 PF00004 ATPase family associated with various cellular activities (AAA) D1100_RS01985 PF07690 Major Facilitator Superfamily D1100_RS01990 PF03009 Glycerophosphoryl diester phosphodiesterase family D1100_RS01995 PF04324 BFD-like [2Fe-2S] binding domain D1100_RS01995 PF01266 FAD dependent oxidoreductase D1100_RS02000 PF00890 FAD binding domain D1100_RS02005 PF02754 Cysteine-rich domain D1100_RS02005 PF13183 4Fe-4S dicluster domain D1100_RS02010 PF01872 RibD C-terminal domain D1100_RS02010 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D1100_RS02015 PF00677 Lumazine binding domain D1100_RS02020 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase D1100_RS02020 PF00925 GTP cyclohydrolase II D1100_RS02025 PF00885 6,7-dimethyl-8-ribityllumazine synthase D1100_RS02030 PF01272 Transcription elongation factor, GreA/GreB, C-term D1100_RS02030 PF03449 Transcription elongation factor, N-terminal D1100_RS02035 PF00571 CBS domain D1100_RS02035 PF01380 SIS domain D1100_RS02040 PF00883 Cytosol aminopeptidase family, catalytic domain D1100_RS02040 PF12404 Peptidase D1100_RS02045 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) D1100_RS02050 PF01758 Sodium Bile acid symporter family D1100_RS02055 PF13533 Biotin-lipoyl like D1100_RS02065 PF08502 LeuA allosteric (dimerisation) domain D1100_RS02065 PF00682 HMGL-like D1100_RS02070 PF08281 Sigma-70, region 4 D1100_RS02070 PF04542 Sigma-70 region 2 D1100_RS02075 PF03872 Anti sigma-E protein RseA, N-terminal domain D1100_RS02075 PF03873 Anti sigma-E protein RseA, C-terminal domain D1100_RS02085 PF00501 AMP-binding enzyme D1100_RS02085 PF13193 AMP-binding enzyme C-terminal domain D1100_RS02095 PF00398 Ribosomal RNA adenine dimethylase D1100_RS02100 PF00639 PPIC-type PPIASE domain D1100_RS02100 PF09312 SurA N-terminal domain D1100_RS02105 PF00156 Phosphoribosyl transferase domain D1100_RS02110 PF00294 pfkB family carbohydrate kinase D1100_RS02110 PF01467 Cytidylyltransferase-like D1100_RS02115 PF01926 50S ribosome-binding GTPase D1100_RS02115 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal D1100_RS02120 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain D1100_RS02120 PF01488 Shikimate / quinate 5-dehydrogenase D1100_RS02120 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain D1100_RS02125 PF02824 TGS domain D1100_RS02125 PF13291 ACT domain D1100_RS02125 PF04607 Region found in RelA / SpoT proteins D1100_RS02130 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain D1100_RS02130 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase D1100_RS02130 PF13288 DXP reductoisomerase C-terminal domain D1100_RS02135 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 D1100_RS02135 PF00132 Bacterial transferase hexapeptide (six repeats) D1100_RS02140 PF07977 FabA-like domain D1100_RS02145 PF00132 Bacterial transferase hexapeptide (six repeats) D1100_RS02145 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD D1100_RS02155 PF01103 Surface antigen D1100_RS02155 PF07244 Surface antigen variable number repeat D1100_RS02160 PF02163 Peptidase family M50 D1100_RS02170 PF01255 Putative undecaprenyl diphosphate synthase D1100_RS02175 PF16123 Hydroxyacylglutathione hydrolase C-terminus D1100_RS02175 PF00753 Metallo-beta-lactamase superfamily D1100_RS02180 PF00480 ROK family D1100_RS02185 PF01569 PAP2 superfamily D1100_RS02190 PF01985 CRS1 / YhbY (CRM) domain D1100_RS02195 PF00535 Glycosyl transferase family 2 D1100_RS02200 PF00768 D-alanyl-D-alanine carboxypeptidase D1100_RS02205 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D1100_RS02210 PF00764 Arginosuccinate synthase D1100_RS02215 PF00075 RNase H D1100_RS02220 PF02674 Colicin V production protein D1100_RS02225 PF00156 Phosphoribosyl transferase domain D1100_RS02235 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain D1100_RS02235 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase D1100_RS02240 PF04355 SmpA / OmlA family D1100_RS02245 PF04245 37-kD nucleoid-associated bacterial protein D1100_RS02250 PF01042 Endoribonuclease L-PSP D1100_RS02255 PF02578 Multi-copper polyphenol oxidoreductase laccase D1100_RS02265 PF00589 Phage integrase family D1100_RS02310 PF04381 Putative exonuclease, RdgC D1100_RS02330 PF03837 RecT family D1100_RS02435 PF05106 Phage holin family (Lysis protein S) D1100_RS02440 PF00182 Chitinase class I D1100_RS02450 PF03592 Terminase small subunit D1100_RS02580 PF07119 Protein of unknown function (DUF1375) D1100_RS02585 PF00180 Isocitrate/isopropylmalate dehydrogenase D1100_RS02590 PF01641 SelR domain D1100_RS02595 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D1100_RS02595 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D1100_RS02605 PF04085 rod shape-determining protein MreC D1100_RS02610 PF04093 rod shape-determining protein MreD D1100_RS02615 PF00004 ATPase family associated with various cellular activities (AAA) D1100_RS02615 PF16193 AAA C-terminal domain D1100_RS02615 PF12002 MgsA AAA+ ATPase C terminal D1100_RS02620 PF00950 ABC 3 transport family D1100_RS02625 PF13230 Glutamine amidotransferases class-II D1100_RS02630 PF00561 alpha/beta hydrolase fold D1100_RS02635 PF02698 DUF218 domain D1100_RS02640 PF05662 Coiled stalk of trimeric autotransporter adhesin D1100_RS02640 PF05658 Head domain of trimeric autotransporter adhesin D1100_RS02640 PF03895 YadA-like membrane anchor domain D1100_RS02645 PF15401 Tryptophan-ring motif of head of Trimeric autotransporter adhesin D1100_RS02645 PF13018 Extended Signal Peptide of Type V secretion system D1100_RS02645 PF05662 Coiled stalk of trimeric autotransporter adhesin D1100_RS02645 PF03895 YadA-like membrane anchor domain D1100_RS02650 PF02589 LUD domain D1100_RS02655 PF02589 LUD domain D1100_RS02655 PF11870 Domain of unknown function (DUF3390) D1100_RS02655 PF13183 4Fe-4S dicluster domain D1100_RS02660 PF02754 Cysteine-rich domain D1100_RS02665 PF02652 L-lactate permease D1100_RS02670 PF00816 H-NS histone family D1100_RS02675 PF03553 Na+/H+ antiporter family D1100_RS02680 PF13407 Periplasmic binding protein domain D1100_RS02685 PF02629 CoA binding domain D1100_RS02685 PF00549 CoA-ligase D1100_RS02690 PF00549 CoA-ligase D1100_RS02690 PF08442 ATP-grasp domain D1100_RS02695 PF04393 Protein of unknown function (DUF535) D1100_RS02700 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D1100_RS02700 PF02817 e3 binding domain D1100_RS02700 PF00364 Biotin-requiring enzyme D1100_RS02705 PF16078 2-oxoglutarate dehydrogenase N-terminus D1100_RS02705 PF00676 Dehydrogenase E1 component D1100_RS02705 PF16870 2-oxoglutarate dehydrogenase C-terminal D1100_RS02705 PF02779 Transketolase, pyrimidine binding domain D1100_RS02710 PF00005 ABC transporter D1100_RS02715 PF01551 Peptidase family M23 D1100_RS02715 PF04225 Opacity-associated protein A LysM-like domain D1100_RS02720 PF13098 Thioredoxin-like domain D1100_RS02720 PF10411 Disulfide bond isomerase protein N-terminus D1100_RS02725 PF02272 DHHA1 domain D1100_RS02725 PF17768 RecJ OB domain D1100_RS02725 PF01368 DHH family D1100_RS02730 PF01389 OmpA-like transmembrane domain D1100_RS02730 PF00691 OmpA family D1100_RS02740 PF07730 Histidine kinase D1100_RS02740 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term D1100_RS02740 PF00672 HAMP domain D1100_RS02740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1100_RS02750 PF01725 Ham1 family D1100_RS02755 PF01906 Putative heavy-metal-binding D1100_RS02760 PF01268 Formate--tetrahydrofolate ligase D1100_RS02765 PF03692 Putative zinc- or iron-chelating domain D1100_RS02770 PF00106 short chain dehydrogenase D1100_RS02775 PF00291 Pyridoxal-phosphate dependent enzyme D1100_RS02780 PF00290 Tryptophan synthase alpha chain D1100_RS02785 PF12441 CopG antitoxin of type II toxin-antitoxin system D1100_RS02795 PF01367 5'-3' exonuclease, C-terminal SAM fold D1100_RS02795 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain D1100_RS02795 PF01612 3'-5' exonuclease D1100_RS02795 PF00476 DNA polymerase family A D1100_RS02810 PF03548 Outer membrane lipoprotein carrier protein LolA D1100_RS02815 PF01371 Trp repressor protein D1100_RS02820 PF00912 Transglycosylase D1100_RS02825 PF02627 Carboxymuconolactone decarboxylase family D1100_RS02855 PF00881 Nitroreductase family D1100_RS02860 PF08443 RimK-like ATP-grasp domain D1100_RS02860 PF18030 RimK PreATP-grasp domain D1100_RS02865 PF02698 DUF218 domain D1100_RS02870 PF00390 Malic enzyme, N-terminal domain D1100_RS02870 PF03949 Malic enzyme, NAD binding domain D1100_RS02870 PF01515 Phosphate acetyl/butaryl transferase D1100_RS02875 PF01386 Ribosomal L25p family D1100_RS02885 PF06226 Protein of unknown function (DUF1007) D1100_RS02890 PF03824 High-affinity nickel-transport protein D1100_RS02895 PF01235 Sodium:alanine symporter family D1100_RS02905 PF00528 Binding-protein-dependent transport system inner membrane component D1100_RS02910 PF00899 ThiF family D1100_RS02925 PF03070 TENA/THI-4/PQQC family D1100_RS02930 PF09084 NMT1/THI5 like D1100_RS02945 PF00679 Elongation factor G C-terminus D1100_RS02945 PF00009 Elongation factor Tu GTP binding domain D1100_RS02945 PF03144 Elongation factor Tu domain 2 D1100_RS02945 PF06421 GTP-binding protein LepA C-terminus D1100_RS02950 PF10502 Signal peptidase, peptidase S26 D1100_RS02955 PF00035 Double-stranded RNA binding motif D1100_RS02955 PF14622 Ribonuclease-III-like D1100_RS02960 PF07650 KH domain D1100_RS02960 PF01926 50S ribosome-binding GTPase D1100_RS02965 PF02565 Recombination protein O C terminal D1100_RS02965 PF11967 Recombination protein O N terminal D1100_RS03000 PF00437 Type II/IV secretion system protein D1100_RS03015 PF03958 Bacterial type II/III secretion system short domain D1100_RS03015 PF00263 Bacterial type II and III secretion system protein D1100_RS03030 PF13936 Helix-turn-helix domain D1100_RS03030 PF00665 Integrase core domain D1100_RS03035 PF00271 Helicase conserved C-terminal domain D1100_RS03035 PF00270 DEAD/DEAH box helicase D1100_RS03045 PF05872 Bacterial protein of unknown function (DUF853) D1100_RS03055 PF00528 Binding-protein-dependent transport system inner membrane component D1100_RS03070 PF00318 Ribosomal protein S2 D1100_RS03075 PF00889 Elongation factor TS D1100_RS03080 PF00884 Sulfatase D1100_RS03085 PF00696 Amino acid kinase family D1100_RS03090 PF01765 Ribosome recycling factor D1100_RS03095 PF00155 Aminotransferase class I and II D1100_RS03095 PF00392 Bacterial regulatory proteins, gntR family D1100_RS03100 PF01680 SOR/SNZ family D1100_RS03105 PF01174 SNO glutamine amidotransferase family D1100_RS03110 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D1100_RS03115 PF03880 DbpA RNA binding domain D1100_RS03115 PF00270 DEAD/DEAH box helicase D1100_RS03115 PF00271 Helicase conserved C-terminal domain D1100_RS03125 PF00013 KH domain D1100_RS03125 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain D1100_RS03125 PF01138 3' exoribonuclease family, domain 1 D1100_RS03125 PF03725 3' exoribonuclease family, domain 2 D1100_RS03125 PF00575 S1 RNA binding domain D1100_RS03130 PF03989 DNA gyrase C-terminal domain, beta-propeller D1100_RS03130 PF00521 DNA gyrase/topoisomerase IV, subunit A D1100_RS03140 PF17192 MukF middle domain D1100_RS03140 PF17193 MukF C-terminal domain D1100_RS03140 PF03882 MukF winged-helix domain D1100_RS03145 PF04288 MukE-like family D1100_RS03150 PF16330 MukB hinge domain D1100_RS03150 PF04310 MukB N-terminal D1100_RS03155 PF00145 C-5 cytosine-specific DNA methylase D1100_RS03165 PF03852 DNA mismatch endonuclease Vsr D1100_RS03175 PF00884 Sulfatase D1100_RS03175 PF11893 Domain of unknown function (DUF3413) D1100_RS03180 PF07208 Protein of unknown function (DUF1414) D1100_RS03185 PF00440 Bacterial regulatory proteins, tetR family D1100_RS03190 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D1100_RS03195 PF00873 AcrB/AcrD/AcrF family D1100_RS03200 PF12804 MobA-like NTP transferase domain D1100_RS03200 PF00132 Bacterial transferase hexapeptide (six repeats) D1100_RS03210 PF08942 Domain of unknown function (DUF1919) D1100_RS03215 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D1100_RS03215 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D1100_RS03215 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D1100_RS03215 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D1100_RS03220 PF00958 GMP synthase C terminal domain D1100_RS03220 PF02540 NAD synthase D1100_RS03220 PF00117 Glutamine amidotransferase class-I D1100_RS03230 PF00478 IMP dehydrogenase / GMP reductase domain D1100_RS03230 PF00571 CBS domain D1100_RS03235 PF01728 FtsJ-like methyltransferase D1100_RS03240 PF00004 ATPase family associated with various cellular activities (AAA) D1100_RS03240 PF06480 FtsH Extracellular D1100_RS03240 PF01434 Peptidase family M41 D1100_RS03240 PF17862 AAA+ lid domain D1100_RS03245 PF03222 Tryptophan/tyrosine permease family D1100_RS03250 PF03222 Tryptophan/tyrosine permease family D1100_RS03255 PF08335 GlnD PII-uridylyltransferase D1100_RS03255 PF01966 HD domain D1100_RS03260 PF06295 Protein of unknown function (DUF1043) D1100_RS03265 PF00572 Ribosomal protein L13 D1100_RS03270 PF00380 Ribosomal protein S9/S16 D1100_RS03275 PF03883 Peroxide stress protein YaaA D1100_RS03285 PF16916 Dimerisation domain of Zinc Transporter D1100_RS03285 PF01545 Cation efflux family D1100_RS03290 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) D1100_RS03295 PF00375 Sodium:dicarboxylate symporter family D1100_RS03300 PF00881 Nitroreductase family D1100_RS03305 PF01409 tRNA synthetases class II core domain (F) D1100_RS03305 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain D1100_RS03310 PF01588 Putative tRNA binding domain D1100_RS03310 PF03147 Ferredoxin-fold anticodon binding domain D1100_RS03310 PF03484 tRNA synthetase B5 domain D1100_RS03310 PF03483 B3/4 domain D1100_RS03310 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain D1100_RS03315 PF00216 Bacterial DNA-binding protein D1100_RS03320 PF00877 NlpC/P60 family D1100_RS03335 PF00480 ROK family D1100_RS03335 PF01047 MarR family D1100_RS03340 PF00570 HRDC domain D1100_RS03340 PF01612 3'-5' exonuclease D1100_RS03345 PF01037 Lrp/AsnC ligand binding domain D1100_RS03350 PF01580 FtsK/SpoIIIE family D1100_RS03350 PF09397 Ftsk gamma domain D1100_RS03350 PF17854 FtsK alpha domain D1100_RS03350 PF13491 4TM region of DNA translocase FtsK/SpoIIIE D1100_RS03355 PF04228 Putative neutral zinc metallopeptidase D1100_RS03360 PF00793 DAHP synthetase I family D1100_RS03365 PF00814 Glycoprotease family D1100_RS03370 PF00265 Thymidine kinase D1100_RS03375 PF06005 Cell division protein ZapB D1100_RS03380 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded D1100_RS03385 PF01784 NIF3 (NGG1p interacting factor 3) D1100_RS03390 PF00005 ABC transporter D1100_RS03390 PF02687 FtsX-like permease family D1100_RS03390 PF12704 MacB-like periplasmic core domain D1100_RS03395 PF16527 Two-component sensor protein CpxA, periplasmic domain D1100_RS03395 PF00672 HAMP domain D1100_RS03395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1100_RS03395 PF00512 His Kinase A (phospho-acceptor) domain D1100_RS03400 PF00072 Response regulator receiver domain D1100_RS03400 PF00486 Transcriptional regulatory protein, C terminal D1100_RS03405 PF03819 MazG nucleotide pyrophosphohydrolase domain D1100_RS03410 PF17848 Acetyl-coA carboxylase zinc finger domain D1100_RS03410 PF01039 Carboxyl transferase domain D1100_RS03415 PF08245 Mur ligase middle domain D1100_RS03425 PF17384 RimP C-terminal SH3 domain D1100_RS03425 PF02576 RimP N-terminal domain D1100_RS03430 PF08529 NusA N-terminal domain D1100_RS03430 PF00575 S1 RNA binding domain D1100_RS03430 PF13184 NusA-like KH domain D1100_RS03435 PF00009 Elongation factor Tu GTP binding domain D1100_RS03435 PF11987 Translation-initiation factor 2 D1100_RS03435 PF04760 Translation initiation factor IF-2, N-terminal region D1100_RS03440 PF02033 Ribosome-binding factor A D1100_RS03445 PF01509 TruB family pseudouridylate synthase (N terminal domain) D1100_RS03445 PF09157 Pseudouridine synthase II TruB, C-terminal D1100_RS03445 PF16198 tRNA pseudouridylate synthase B C-terminal domain D1100_RS03450 PF13406 Transglycosylase SLT domain D1100_RS03455 PF07411 Domain of unknown function (DUF1508) D1100_RS03460 PF07085 DRTGG domain D1100_RS03460 PF01515 Phosphate acetyl/butaryl transferase D1100_RS03465 PF00871 Acetokinase family D1100_RS03470 PF02872 5'-nucleotidase, C-terminal domain D1100_RS03470 PF00149 Calcineurin-like phosphoesterase D1100_RS03480 PF13609 Gram-negative porin D1100_RS03490 PF00483 Nucleotidyl transferase D1100_RS03495 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D1100_RS03495 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D1100_RS03495 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D1100_RS03495 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D1100_RS03500 PF02599 Global regulator protein family D1100_RS03505 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D1100_RS03505 PF01411 tRNA synthetases class II (A) D1100_RS03505 PF02272 DHHA1 domain D1100_RS03510 PF00582 Universal stress protein family D1100_RS03515 PF00325 Bacterial regulatory proteins, crp family D1100_RS03515 PF00027 Cyclic nucleotide-binding domain D1100_RS03520 PF04386 Stringent starvation protein B D1100_RS03525 PF02798 Glutathione S-transferase, N-terminal domain D1100_RS03525 PF00043 Glutathione S-transferase, C-terminal domain D1100_RS03530 PF00731 AIR carboxylase D1100_RS03535 PF17763 Glutaminase/Asparaginase C-terminal domain D1100_RS03535 PF00710 Asparaginase, N-terminal D1100_RS03540 PF02222 ATP-grasp domain D1100_RS03540 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain D1100_RS03545 PF00155 Aminotransferase class I and II D1100_RS03550 PF00557 Metallopeptidase family M24 D1100_RS03550 PF05195 Aminopeptidase P, N-terminal domain D1100_RS03555 PF13635 Domain of unknown function (DUF4143) D1100_RS03555 PF13173 AAA domain D1100_RS03560 PF01850 PIN domain D1100_RS03570 PF17757 UvrB interaction domain D1100_RS03570 PF12344 Ultra-violet resistance protein B D1100_RS03570 PF02151 UvrB/uvrC motif D1100_RS03570 PF04851 Type III restriction enzyme, res subunit D1100_RS03570 PF00271 Helicase conserved C-terminal domain D1100_RS03575 PF09375 Imelysin D1100_RS03580 PF10518 TAT (twin-arginine translocation) pathway signal sequence D1100_RS03580 PF04261 Dyp-type peroxidase family D1100_RS03590 PF02811 PHP domain D1100_RS03600 PF00929 Exonuclease D1100_RS03600 PF08411 Exonuclease C-terminal D1100_RS03605 PF00654 Voltage gated chloride channel D1100_RS03610 PF01336 OB-fold nucleic acid binding domain D1100_RS03610 PF00152 tRNA synthetases class II (D, K and N) D1100_RS03615 PF04055 Radical SAM superfamily D1100_RS03625 PF01132 Elongation factor P (EF-P) OB domain D1100_RS03625 PF08207 Elongation factor P (EF-P) KOW-like domain D1100_RS03625 PF09285 Elongation factor P, C-terminal D1100_RS03630 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain D1100_RS03630 PF00749 tRNA synthetases class I (E and Q), catalytic domain D1100_RS03635 PF07690 Major Facilitator Superfamily D1100_RS03640 PF01464 Transglycosylase SLT domain D1100_RS03640 PF14718 Soluble lytic murein transglycosylase L domain D1100_RS03645 PF00156 Phosphoribosyl transferase domain D1100_RS03650 PF01053 Cys/Met metabolism PLP-dependent enzyme D1100_RS03655 PF05173 Dihydrodipicolinate reductase, C-terminus D1100_RS03655 PF01113 Dihydrodipicolinate reductase, N-terminus D1100_RS03670 PF01728 FtsJ-like methyltransferase D1100_RS03670 PF18125 RlmM ferredoxin-like domain D1100_RS03675 PF04241 Protein of unknown function (DUF423) D1100_RS03680 PF01565 FAD binding domain D1100_RS03680 PF09330 D-lactate dehydrogenase, membrane binding D1100_RS03685 PF01568 Molydopterin dinucleotide binding domain D1100_RS03685 PF18364 Molybdopterin oxidoreductase N-terminal domain D1100_RS03685 PF00384 Molybdopterin oxidoreductase D1100_RS03690 PF03264 NapC/NirT cytochrome c family, N-terminal region D1100_RS03695 PF04055 Radical SAM superfamily D1100_RS03695 PF06463 Molybdenum Cofactor Synthesis C D1100_RS03700 PF01967 MoaC family D1100_RS03705 PF02597 ThiS family D1100_RS03710 PF02391 MoaE protein D1100_RS03715 PF02130 Uncharacterized protein family UPF0054 D1100_RS03720 PF17176 tRNA-binding domain D1100_RS03720 PF05127 Helicase D1100_RS03720 PF13718 GNAT acetyltransferase 2 D1100_RS03725 PF01396 Topoisomerase DNA binding C4 zinc finger D1100_RS03725 PF01131 DNA topoisomerase D1100_RS03725 PF01751 Toprim domain D1100_RS03725 PF08272 Topoisomerase I zinc-ribbon-like D1100_RS03730 PF03466 LysR substrate binding domain D1100_RS03730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1100_RS03735 PF00583 Acetyltransferase (GNAT) family D1100_RS03735 PF00696 Amino acid kinase family D1100_RS03740 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D1100_RS03745 PF00155 Aminotransferase class I and II D1100_RS03750 PF01053 Cys/Met metabolism PLP-dependent enzyme D1100_RS03755 PF00266 Aminotransferase class-V D1100_RS03760 PF00176 SNF2 family N-terminal domain D1100_RS03760 PF00271 Helicase conserved C-terminal domain D1100_RS03770 PF01555 DNA methylase D1100_RS03775 PF01380 SIS domain D1100_RS03775 PF01418 Helix-turn-helix domain, rpiR family D1100_RS03780 PF04074 YhcH/YjgK/YiaL D1100_RS03785 PF02541 Ppx/GppA phosphatase family D1100_RS03790 PF04363 Protein of unknown function (DUF496) D1100_RS03795 PF00696 Amino acid kinase family D1100_RS03795 PF01842 ACT domain D1100_RS03800 PF03477 ATP cone domain D1100_RS03805 PF05166 YcgL domain D1100_RS03810 PF03796 DnaB-like helicase C terminal domain D1100_RS03810 PF00772 DnaB-like helicase N terminal domain D1100_RS03815 PF01497 Periplasmic binding protein D1100_RS03820 PF01032 FecCD transport family D1100_RS03825 PF01032 FecCD transport family D1100_RS03830 PF00005 ABC transporter D1100_RS03835 PF01865 Protein of unknown function DUF47 D1100_RS03840 PF01384 Phosphate transporter family D1100_RS03845 PF08239 Bacterial SH3 domain D1100_RS03855 PF01814 Hemerythrin HHE cation binding domain D1100_RS03860 PF01702 Queuine tRNA-ribosyltransferase D1100_RS03870 PF00313 'Cold-shock' DNA-binding domain D1100_RS03875 PF00484 Carbonic anhydrase D1100_RS03880 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D1100_RS03880 PF00205 Thiamine pyrophosphate enzyme, central domain D1100_RS03880 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D1100_RS03885 PF10369 Small subunit of acetolactate synthase D1100_RS03890 PF01523 Putative modulator of DNA gyrase D1100_RS03895 PF04751 Protein of unknown function (DUF615) D1100_RS03900 PF04247 Invasion gene expression up-regulator, SirB D1100_RS03905 PF02441 Flavoprotein D1100_RS03910 PF04474 Protein of unknown function (DUF554) D1100_RS03920 PF01253 Translation initiation factor SUI1 D1100_RS03925 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family D1100_RS03930 PF18073 Rubredoxin metal binding domain D1100_RS03935 PF06305 Lipopolysaccharide assembly protein A domain D1100_RS03940 PF00216 Bacterial DNA-binding protein D1100_RS03945 PF00575 S1 RNA binding domain D1100_RS03950 PF02224 Cytidylate kinase D1100_RS03955 PF13180 PDZ domain D1100_RS03965 PF03840 Preprotein translocase SecG subunit D1100_RS03970 PF01751 Toprim domain D1100_RS03970 PF01131 DNA topoisomerase D1100_RS03975 PF00245 Alkaline phosphatase D1100_RS03980 PF03411 Penicillin-insensitive murein endopeptidase D1100_RS03985 PF01264 Chorismate synthase D1100_RS03990 PF12794 Mechanosensitive ion channel inner membrane domain 1 D1100_RS03990 PF12795 Mechanosensitive ion channel porin domain D1100_RS03990 PF00924 Mechanosensitive ion channel D1100_RS03995 PF12795 Mechanosensitive ion channel porin domain D1100_RS03995 PF12794 Mechanosensitive ion channel inner membrane domain 1 D1100_RS03995 PF00924 Mechanosensitive ion channel D1100_RS04000 PF00501 AMP-binding enzyme D1100_RS04005 PF03925 SeqA protein C-terminal domain D1100_RS04005 PF17206 SeqA protein N-terminal domain D1100_RS04010 PF00561 alpha/beta hydrolase fold D1100_RS04015 PF13649 Methyltransferase domain D1100_RS04035 PF00575 S1 RNA binding domain D1100_RS04035 PF00773 RNB domain D1100_RS04035 PF08206 Ribonuclease B OB domain D1100_RS04040 PF03788 LrgA family D1100_RS04045 PF04172 LrgB-like family D1100_RS04050 PF00149 Calcineurin-like phosphoesterase D1100_RS04060 PF00589 Phage integrase family D1100_RS04060 PF13356 Arm DNA-binding domain D1100_RS04115 PF03354 Phage Terminase D1100_RS04160 PF03889 Alternative ribosome-rescue factor A D1100_RS04165 PF13649 Methyltransferase domain D1100_RS04170 PF01594 AI-2E family transporter D1100_RS04175 PF01933 Uncharacterised protein family UPF0052 D1100_RS04180 PF02547 Queuosine biosynthesis protein D1100_RS04185 PF13567 Domain of unknown function (DUF4131) D1100_RS04185 PF00753 Metallo-beta-lactamase superfamily D1100_RS04185 PF03772 Competence protein D1100_RS04190 PF00375 Sodium:dicarboxylate symporter family D1100_RS04195 PF01219 Prokaryotic diacylglycerol kinase D1100_RS04200 PF02872 5'-nucleotidase, C-terminal domain D1100_RS04200 PF00149 Calcineurin-like phosphoesterase D1100_RS04220 PF07992 Pyridine nucleotide-disulphide oxidoreductase D1100_RS04220 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D1100_RS04225 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D1100_RS04225 PF00364 Biotin-requiring enzyme D1100_RS04225 PF02817 e3 binding domain D1100_RS04230 PF17831 Pyruvate dehydrogenase E1 component middle domain D1100_RS04230 PF00456 Transketolase, thiamine diphosphate binding domain D1100_RS04235 PF01180 Dihydroorotate dehydrogenase D1100_RS04240 PF14572 Phosphoribosyl synthetase-associated domain D1100_RS04240 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase D1100_RS04245 PF00288 GHMP kinases N terminal domain D1100_RS04245 PF08544 GHMP kinases C terminal D1100_RS04250 PF03550 Outer membrane lipoprotein LolB D1100_RS04255 PF00664 ABC transporter transmembrane region D1100_RS04255 PF00005 ABC transporter D1100_RS04260 PF04172 LrgB-like family D1100_RS04270 PF06733 DEAD_2 D1100_RS04270 PF13307 Helicase C-terminal domain D1100_RS04280 PF17755 UvrA DNA-binding domain D1100_RS04280 PF17760 UvrA interaction domain D1100_RS04285 PF00436 Single-strand binding protein family D1100_RS04310 PF00873 AcrB/AcrD/AcrF family D1100_RS04325 PF00679 Elongation factor G C-terminus D1100_RS04325 PF14492 Elongation Factor G, domain II D1100_RS04325 PF00009 Elongation factor Tu GTP binding domain D1100_RS04325 PF03764 Elongation factor G, domain IV D1100_RS04335 PF07731 Multicopper oxidase D1100_RS04335 PF07732 Multicopper oxidase D1100_RS04335 PF10518 TAT (twin-arginine translocation) pathway signal sequence D1100_RS04335 PF00394 Multicopper oxidase D1100_RS04390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1100_RS04390 PF03466 LysR substrate binding domain D1100_RS04395 PF03060 Nitronate monooxygenase D1100_RS04405 PF04237 YjbR D1100_RS04410 PF00005 ABC transporter D1100_RS04410 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D1100_RS04415 PF12911 N-terminal TM domain of oligopeptide transport permease C D1100_RS04415 PF00528 Binding-protein-dependent transport system inner membrane component D1100_RS04420 PF00528 Binding-protein-dependent transport system inner membrane component D1100_RS04425 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D1100_RS04430 PF18024 Helix-turn-helix domain D1100_RS04430 PF00158 Sigma-54 interaction domain D1100_RS04435 PF13580 SIS domain D1100_RS04440 PF01293 Phosphoenolpyruvate carboxykinase D1100_RS04445 PF04977 Septum formation initiator D1100_RS04450 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase D1100_RS04455 PF02542 YgbB family D1100_RS04465 PF00884 Sulfatase D1100_RS04470 PF00111 2Fe-2S iron-sulfur cluster binding domain D1100_RS04470 PF03473 MOSC domain D1100_RS04470 PF03476 MOSC N-terminal beta barrel domain D1100_RS04475 PF02609 Exonuclease VII small subunit D1100_RS04480 PF00348 Polyprenyl synthetase D1100_RS04490 PF01336 OB-fold nucleic acid binding domain D1100_RS04490 PF00152 tRNA synthetases class II (D, K and N) D1100_RS04495 PF00575 S1 RNA binding domain D1100_RS04495 PF10150 Ribonuclease E/G family D1100_RS04500 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding D1100_RS04500 PF18381 YcaO cyclodehydratase C-terminal domain D1100_RS04505 PF08003 Protein of unknown function (DUF1698) D1100_RS04515 PF06725 3D domain D1100_RS04515 PF03562 MltA specific insert domain D1100_RS04525 PF02601 Exonuclease VII, large subunit D1100_RS04525 PF13742 OB-fold nucleic acid binding domain D1100_RS04535 PF00576 HIUase/Transthyretin family D1100_RS04540 PF00356 Bacterial regulatory proteins, lacI family D1100_RS04540 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D1100_RS04545 PF09335 SNARE associated Golgi protein D1100_RS04550 PF00986 DNA gyrase B subunit, carboxyl terminus D1100_RS04550 PF18053 DNA gyrase B subunit insert domain D1100_RS04550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1100_RS04550 PF01751 Toprim domain D1100_RS04550 PF00204 DNA gyrase B D1100_RS04555 PF01040 UbiA prenyltransferase family D1100_RS04560 PF08220 DeoR-like helix-turn-helix domain D1100_RS04560 PF00455 DeoR C terminal sensor domain D1100_RS04565 PF08328 Adenylosuccinate lyase C-terminal D1100_RS04565 PF00206 Lyase D1100_RS04570 PF04356 Protein of unknown function (DUF489) D1100_RS04575 PF00005 ABC transporter D1100_RS04575 PF00664 ABC transporter transmembrane region D1100_RS04580 PF00005 ABC transporter D1100_RS04580 PF00664 ABC transporter transmembrane region D1100_RS04585 PF04357 TamB, inner membrane protein subunit of TAM complex D1100_RS04590 PF17243 POTRA domain TamA domain 1 D1100_RS04590 PF01103 Surface antigen D1100_RS04595 PF04748 Divergent polysaccharide deacetylase D1100_RS04600 PF01551 Peptidase family M23 D1100_RS04605 PF00300 Histidine phosphatase superfamily (branch 1) D1100_RS04610 PF01810 LysE type translocator D1100_RS04615 PF00485 Phosphoribulokinase / Uridine kinase family D1100_RS04620 PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) D1100_RS04625 PF14278 Transcriptional regulator C-terminal region D1100_RS04625 PF00440 Bacterial regulatory proteins, tetR family D1100_RS04630 PF13533 Biotin-lipoyl like D1100_RS04635 PF00005 ABC transporter D1100_RS04645 PF02321 Outer membrane efflux protein D1100_RS04650 PF02233 NAD(P) transhydrogenase beta subunit D1100_RS04655 PF05222 Alanine dehydrogenase/PNT, N-terminal domain D1100_RS04655 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch D1100_RS04655 PF01262 Alanine dehydrogenase/PNT, C-terminal domain D1100_RS04660 PF00588 SpoU rRNA Methylase family D1100_RS04665 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term D1100_RS04665 PF14489 QueF-like protein D1100_RS04675 PF00578 AhpC/TSA family D1100_RS04680 PF06969 HemN C-terminal domain D1100_RS04680 PF04055 Radical SAM superfamily D1100_RS04685 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D1100_RS04690 PF00528 Binding-protein-dependent transport system inner membrane component D1100_RS04695 PF00005 ABC transporter D1100_RS04695 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D1100_RS04700 PF00005 ABC transporter D1100_RS04700 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D1100_RS04705 PF00890 FAD binding domain D1100_RS04710 PF01717 Cobalamin-independent synthase, Catalytic domain D1100_RS04715 PF02219 Methylenetetrahydrofolate reductase D1100_RS04720 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D1100_RS04725 PF03222 Tryptophan/tyrosine permease family D1100_RS04730 PF03315 Serine dehydratase beta chain D1100_RS04730 PF03313 Serine dehydratase alpha chain D1100_RS04735 PF05430 S-adenosyl-L-methionine-dependent methyltransferase D1100_RS04735 PF01266 FAD dependent oxidoreductase D1100_RS04740 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase D1100_RS04740 PF00218 Indole-3-glycerol phosphate synthase D1100_RS04745 PF12728 Helix-turn-helix domain D1100_RS04745 PF02661 Fic/DOC family D1100_RS04750 PF04287 tRNA pseudouridine synthase C D1100_RS04755 PF00849 RNA pseudouridylate synthase D1100_RS04760 PF03701 Uncharacterised protein family (UPF0181) D1100_RS04770 PF01928 CYTH domain D1100_RS04775 PF04317 YcjX-like family, DUF463 D1100_RS04780 PF01668 SmpB protein D1100_RS04785 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D1100_RS04785 PF02403 Seryl-tRNA synthetase N-terminal domain D1100_RS04790 PF01546 Peptidase family M20/M25/M40 D1100_RS04790 PF07687 Peptidase dimerisation domain D1100_RS04795 PF03606 C4-dicarboxylate anaerobic carrier D1100_RS04800 PF03575 Peptidase family S51 D1100_RS04805 PF08264 Anticodon-binding domain of tRNA D1100_RS04805 PF13603 Leucyl-tRNA synthetase, Domain 2 D1100_RS04805 PF00133 tRNA synthetases class I (I, L, M and V) D1100_RS04810 PF04390 Lipopolysaccharide-assembly D1100_RS04815 PF06144 DNA polymerase III, delta subunit D1100_RS04815 PF14840 Processivity clamp loader gamma complex DNA pol III C-term D1100_RS04820 PF03884 DNA gyrase inhibitor YacG D1100_RS04825 PF01121 Dephospho-CoA kinase D1100_RS04835 PF00482 Type II secretion system (T2SS), protein F D1100_RS04840 PF00437 Type II/IV secretion system protein D1100_RS04840 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain D1100_RS04845 PF07963 Prokaryotic N-terminal methylation motif D1100_RS04850 PF18073 Rubredoxin metal binding domain D1100_RS04860 PF00186 Dihydrofolate reductase D1100_RS04865 PF01472 PUA domain D1100_RS04865 PF00696 Amino acid kinase family D1100_RS04870 PF01925 Sulfite exporter TauE/SafE D1100_RS04875 PF00730 HhH-GPD superfamily base excision DNA repair protein D1100_RS04875 PF00633 Helix-hairpin-helix motif D1100_RS04875 PF10576 Iron-sulfur binding domain of endonuclease III D1100_RS04880 PF00108 Thiolase, N-terminal domain D1100_RS04880 PF02803 Thiolase, C-terminal domain D1100_RS04885 PF00378 Enoyl-CoA hydratase/isomerase D1100_RS04885 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D1100_RS04885 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D1100_RS04900 PF02634 FdhD/NarQ family D1100_RS04910 PF13247 4Fe-4S dicluster domain D1100_RS04910 PF09163 Formate dehydrogenase N, transmembrane D1100_RS04915 PF01292 Prokaryotic cytochrome b561 D1100_RS04920 PF04216 Protein involved in formate dehydrogenase formation D1100_RS04935 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain D1100_RS04935 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain D1100_RS04945 PF00701 Dihydrodipicolinate synthetase family D1100_RS04950 PF03279 Bacterial lipid A biosynthesis acyltransferase D1100_RS04955 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein D1100_RS04960 PF01416 tRNA pseudouridine synthase D1100_RS04965 PF01227 GTP cyclohydrolase I D1100_RS04980 PF12464 Maltose acetyltransferase D1100_RS04980 PF14602 Hexapeptide repeat of succinyl-transferase D1100_RS04990 PF03466 LysR substrate binding domain D1100_RS04990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1100_RS04995 PF03180 NLPA lipoprotein D1100_RS05000 PF03180 NLPA lipoprotein D1100_RS05005 PF00528 Binding-protein-dependent transport system inner membrane component D1100_RS05010 PF09383 NIL domain D1100_RS05010 PF00005 ABC transporter D1100_RS05015 PF09190 DALR domain D1100_RS05015 PF01406 tRNA synthetases class I (C) catalytic domain D1100_RS05020 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D1100_RS05025 PF12627 Probable RNA and SrmB- binding site of polymerase A D1100_RS05025 PF01743 Poly A polymerase head domain D1100_RS05025 PF01966 HD domain D1100_RS05035 PF00593 TonB dependent receptor D1100_RS05035 PF07715 TonB-dependent Receptor Plug Domain D1100_RS05050 PF04384 Iron-sulphur cluster assembly D1100_RS05055 PF00111 2Fe-2S iron-sulfur cluster binding domain D1100_RS05060 PF00012 Hsp70 protein D1100_RS05065 PF10946 Protein of unknown function DUF2625 D1100_RS05075 PF07743 HSCB C-terminal oligomerisation domain D1100_RS05080 PF01521 Iron-sulphur cluster biosynthesis D1100_RS05085 PF01592 NifU-like N terminal domain D1100_RS05090 PF00266 Aminotransferase class-V D1100_RS05095 PF02082 Transcriptional regulator D1100_RS05100 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) D1100_RS05105 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain D1100_RS05105 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain D1100_RS05110 PF18415 Histidine kinase receptor ArcB trans-membrane domain D1100_RS05110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1100_RS05110 PF01627 Hpt domain D1100_RS05110 PF00989 PAS fold D1100_RS05110 PF00072 Response regulator receiver domain D1100_RS05110 PF00512 His Kinase A (phospho-acceptor) domain D1100_RS05120 PF01713 Smr domain D1100_RS05130 PF08241 Methyltransferase domain D1100_RS05135 PF04301 Protein of unknown function (DUF452) D1100_RS05140 PF00155 Aminotransferase class I and II D1100_RS05145 PF00202 Aminotransferase class-III D1100_RS05150 PF05175 Methyltransferase small domain D1100_RS05155 PF01272 Transcription elongation factor, GreA/GreB, C-term D1100_RS05155 PF03449 Transcription elongation factor, N-terminal D1100_RS05160 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family D1100_RS05185 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) D1100_RS05185 PF02382 N-terminal domain in RTX protein D1100_RS05185 PF08339 RTX C-terminal domain D1100_RS05190 PF02794 RTX toxin acyltransferase family D1100_RS05195 PF17176 tRNA-binding domain D1100_RS05195 PF05127 Helicase D1100_RS05195 PF13718 GNAT acetyltransferase 2 D1100_RS05200 PF02142 MGS-like domain D1100_RS05200 PF01808 AICARFT/IMPCHase bienzyme D1100_RS05225 PF04829 Pre-toxin domain with VENN motif D1100_RS05225 PF05860 haemagglutination activity domain D1100_RS05225 PF13332 Hemagglutinin repeat D1100_RS05225 PF13018 Extended Signal Peptide of Type V secretion system D1100_RS05235 PF03968 OstA-like protein D1100_RS05235 PF04453 LPS transport system D D1100_RS05240 PF04055 Radical SAM superfamily D1100_RS05240 PF06969 HemN C-terminal domain D1100_RS05250 PF04220 Der GTPase activator (YihI) D1100_RS05260 PF00665 Integrase core domain D1100_RS05260 PF13936 Helix-turn-helix domain D1100_RS05270 PF03616 Sodium/glutamate symporter D1100_RS05275 PF06062 Uncharacterised protein family (UPF0231) D1100_RS05280 PF08335 GlnD PII-uridylyltransferase D1100_RS05280 PF03710 Glutamate-ammonia ligase adenylyltransferase D1100_RS05285 PF03795 YCII-related domain D1100_RS05290 PF03061 Thioesterase superfamily D1100_RS05295 PF04279 Intracellular septation protein A D1100_RS05305 PF04217 Protein of unknown function, DUF412 D1100_RS05310 PF01171 PP-loop family D1100_RS05315 PF13726 Na+-H+ antiporter family D1100_RS05315 PF03553 Na+/H+ antiporter family D1100_RS05320 PF03372 Endonuclease/Exonuclease/phosphatase family D1100_RS05325 PF03466 LysR substrate binding domain D1100_RS05325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1100_RS05345 PF01197 Ribosomal protein L31 D1100_RS05350 PF02779 Transketolase, pyrimidine binding domain D1100_RS05350 PF02780 Transketolase, C-terminal domain D1100_RS05350 PF00456 Transketolase, thiamine diphosphate binding domain D1100_RS05355 PF00183 Hsp90 protein D1100_RS05355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1100_RS05360 PF00199 Catalase D1100_RS05360 PF06628 Catalase-related immune-responsive D1100_RS05375 PF00149 Calcineurin-like phosphoesterase D1100_RS05380 PF03477 ATP cone domain D1100_RS05380 PF02867 Ribonucleotide reductase, barrel domain D1100_RS05380 PF00317 Ribonucleotide reductase, all-alpha domain D1100_RS05385 PF00268 Ribonucleotide reductase, small chain D1100_RS05390 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain D1100_RS05390 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain D1100_RS05395 PF00288 GHMP kinases N terminal domain D1100_RS05395 PF08544 GHMP kinases C terminal D1100_RS05395 PF10509 Galactokinase galactose-binding signature D1100_RS05400 PF01263 Aldose 1-epimerase D1100_RS05405 PF02837 Glycosyl hydrolases family 2, sugar binding domain D1100_RS05405 PF02836 Glycosyl hydrolases family 2, TIM barrel domain D1100_RS05405 PF00703 Glycosyl hydrolases family 2 D1100_RS05405 PF16353 Domain of unknown function(DUF4981) D1100_RS05405 PF02929 Beta galactosidase small chain D1100_RS05430 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) D1100_RS05430 PF06594 Haemolysin-type calcium binding protein related domain D1100_RS05440 PF10609 NUBPL iron-transfer P-loop NTPase D1100_RS05450 PF01914 MarC family integral membrane protein D1100_RS05455 PF13145 PPIC-type PPIASE domain D1100_RS05460 PF00999 Sodium/hydrogen exchanger family D1100_RS05465 PF00312 Ribosomal protein S15 D1100_RS05470 PF05661 Protein of unknown function (DUF808) D1100_RS05475 PF07219 HemY protein N-terminus D1100_RS05480 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase D1100_RS05485 PF02602 Uroporphyrinogen-III synthase HemD D1100_RS05490 PF03900 Porphobilinogen deaminase, C-terminal domain D1100_RS05490 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain D1100_RS05495 PF00465 Iron-containing alcohol dehydrogenase D1100_RS05495 PF00171 Aldehyde dehydrogenase family D1100_RS05500 PF00118 TCP-1/cpn60 chaperonin family D1100_RS05505 PF00166 Chaperonin 10 Kd subunit D1100_RS05510 PF01048 Phosphorylase superfamily D1100_RS05515 PF01791 DeoC/LacD family aldolase D1100_RS05520 PF01773 Na+ dependent nucleoside transporter N-terminus D1100_RS05520 PF07670 Nucleoside recognition D1100_RS05520 PF07662 Na+ dependent nucleoside transporter C-terminus D1100_RS05530 PF01081 KDPG and KHG aldolase D1100_RS05535 PF00294 pfkB family carbohydrate kinase D1100_RS05540 PF02614 Glucuronate isomerase D1100_RS05550 PF00392 Bacterial regulatory proteins, gntR family D1100_RS05550 PF07729 FCD domain D1100_RS05560 PF01641 SelR domain D1100_RS05560 PF01625 Peptide methionine sulfoxide reductase D1100_RS05565 PF00535 Glycosyl transferase family 2 D1100_RS05570 PF00535 Glycosyl transferase family 2 D1100_RS05580 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) D1100_RS05590 PF04230 Polysaccharide pyruvyl transferase D1100_RS05595 PF02698 DUF218 domain D1100_RS05600 PF00270 DEAD/DEAH box helicase D1100_RS05600 PF17764 3′ DNA-binding domain (3′BD) D1100_RS05600 PF18074 Primosomal protein N C-terminal domain D1100_RS05600 PF18319 PriA DNA helicase Cys-rich region (CRR) domain D1100_RS05600 PF00271 Helicase conserved C-terminal domain D1100_RS05605 PF01817 Chorismate mutase type II D1100_RS05605 PF00800 Prephenate dehydratase D1100_RS05610 PF01432 Peptidase family M3 D1100_RS05615 PF04055 Radical SAM superfamily D1100_RS05620 PF01228 Glycine radical D1100_RS05620 PF02901 Pyruvate formate lyase-like D1100_RS05625 PF01226 Formate/nitrite transporter D1100_RS05635 PF01435 Peptidase family M48 D1100_RS05640 PF00817 impB/mucB/samB family D1100_RS05640 PF11799 impB/mucB/samB family C-terminal domain D1100_RS05640 PF11798 IMS family HHH motif D1100_RS05645 PF03956 Lysine exporter LysO D1100_RS05650 PF00425 chorismate binding enzyme D1100_RS05655 PF00155 Aminotransferase class I and II D1100_RS05660 PF00892 EamA-like transporter family D1100_RS05665 PF00892 EamA-like transporter family D1100_RS05670 PF01810 LysE type translocator D1100_RS05675 PF07715 TonB-dependent Receptor Plug Domain D1100_RS05675 PF04886 PT repeat D1100_RS05675 PF00593 TonB dependent receptor D1100_RS05680 PF01243 Pyridoxamine 5'-phosphate oxidase D1100_RS05690 PF03918 Cytochrome C biogenesis protein D1100_RS05695 PF08534 Redoxin D1100_RS05700 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal D1100_RS05700 PF01578 Cytochrome C assembly protein D1100_RS05705 PF00999 Sodium/hydrogen exchanger family D1100_RS05705 PF02254 TrkA-N domain D1100_RS05710 PF12633 Adenylate cyclase NT domain D1100_RS05710 PF01295 Adenylate cyclase, class-I D1100_RS05715 PF00109 Beta-ketoacyl synthase, N-terminal domain D1100_RS05715 PF02801 Beta-ketoacyl synthase, C-terminal domain D1100_RS05725 PF04076 Bacterial OB fold (BOF) protein D1100_RS05745 PF00486 Transcriptional regulatory protein, C terminal D1100_RS05745 PF00072 Response regulator receiver domain D1100_RS05750 PF00512 His Kinase A (phospho-acceptor) domain D1100_RS05750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1100_RS05750 PF08521 Two-component sensor kinase N-terminal D1100_RS05755 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) D1100_RS05760 PF02699 Preprotein translocase subunit D1100_RS05765 PF02355 Protein export membrane protein D1100_RS05765 PF13721 SecD export protein N-terminal TM region D1100_RS05765 PF07549 SecD/SecF GG Motif D1100_RS05770 PF07549 SecD/SecF GG Motif D1100_RS05770 PF02355 Protein export membrane protein D1100_RS05775 PF00210 Ferritin-like domain D1100_RS05780 PF00210 Ferritin-like domain D1100_RS05785 PF00860 Permease family D1100_RS05790 PF02545 Maf-like protein D1100_RS05800 PF02568 Thiamine biosynthesis protein (ThiI) D1100_RS05800 PF02926 THUMP domain D1100_RS05805 PF00709 Adenylosuccinate synthetase D1100_RS05810 PF01145 SPFH domain / Band 7 family D1100_RS05815 PF01145 SPFH domain / Band 7 family D1100_RS05820 PF00085 Thioredoxin D1100_RS05825 PF00860 Permease family D1100_RS05830 PF00438 S-adenosylmethionine synthetase, N-terminal domain D1100_RS05830 PF02772 S-adenosylmethionine synthetase, central domain D1100_RS05830 PF02773 S-adenosylmethionine synthetase, C-terminal domain D1100_RS05840 PF13520 Amino acid permease D1100_RS05845 PF13520 Amino acid permease D1100_RS05855 PF07687 Peptidase dimerisation domain D1100_RS05855 PF01546 Peptidase family M20/M25/M40 D1100_RS05860 PF03922 OmpW family D1100_RS05865 PF10431 C-terminal, D2-small domain, of ClpB protein D1100_RS05865 PF02861 Clp amino terminal domain, pathogenicity island component D1100_RS05865 PF17871 AAA lid domain D1100_RS05865 PF07724 AAA domain (Cdc48 subfamily) D1100_RS05865 PF00004 ATPase family associated with various cellular activities (AAA) D1100_RS05870 PF01758 Sodium Bile acid symporter family D1100_RS05875 PF03960 ArsC family D1100_RS05885 PF00206 Lyase D1100_RS05885 PF10415 Fumarase C C-terminus D1100_RS05895 PF02769 AIR synthase related protein, C-terminal domain D1100_RS05895 PF00586 AIR synthase related protein, N-terminal domain D1100_RS05900 PF07501 G5 domain D1100_RS05900 PF00746 LPXTG cell wall anchor motif D1100_RS05900 PF04650 YSIRK type signal peptide D1100_RS05900 PF00728 Glycosyl hydrolase family 20, catalytic domain D1100_RS05905 PF06508 Queuosine biosynthesis protein QueC D1100_RS05910 PF01242 6-pyruvoyl tetrahydropterin synthase D1100_RS05915 PF04055 Radical SAM superfamily D1100_RS05930 PF00883 Cytosol aminopeptidase family, catalytic domain D1100_RS05930 PF02789 Cytosol aminopeptidase family, N-terminal domain D1100_RS05940 PF03739 Lipopolysaccharide export system permease LptF/LptG D1100_RS05945 PF03739 Lipopolysaccharide export system permease LptF/LptG D1100_RS05950 PF07733 Bacterial DNA polymerase III alpha NTPase domain D1100_RS05950 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D1100_RS05950 PF14579 Helix-hairpin-helix motif D1100_RS05950 PF02811 PHP domain D1100_RS05950 PF01336 OB-fold nucleic acid binding domain D1100_RS05970 PF02222 ATP-grasp domain D1100_RS05970 PF01370 NAD dependent epimerase/dehydratase family D1100_RS05975 PF01553 Acyltransferase D1100_RS05980 PF00717 Peptidase S24-like D1100_RS05980 PF01726 LexA DNA binding domain D1100_RS05985 PF02976 DNA mismatch repair enzyme MutH D1100_RS05990 PF03741 Integral membrane protein TerC family D1100_RS05995 PF00933 Glycosyl hydrolase family 3 N terminal domain D1100_RS06000 PF05958 tRNA (Uracil-5-)-methyltransferase D1100_RS06005 PF03952 Enolase, N-terminal domain D1100_RS06005 PF00113 Enolase, C-terminal TIM barrel domain D1100_RS06010 PF00293 NUDIX domain D1100_RS06015 PF10008 Uncharacterized protein conserved in bacteria (DUF2251) D1100_RS06020 PF00271 Helicase conserved C-terminal domain D1100_RS06020 PF16124 RecQ zinc-binding D1100_RS06020 PF09382 RQC domain D1100_RS06020 PF00270 DEAD/DEAH box helicase D1100_RS06020 PF00570 HRDC domain D1100_RS06025 PF01491 Frataxin-like domain D1100_RS06035 PF00814 Glycoprotease family D1100_RS06040 PF13525 Outer membrane lipoprotein D1100_RS06045 PF00849 RNA pseudouridylate synthase D1100_RS06045 PF01479 S4 domain D1100_RS06050 PF14256 YwiC-like protein D1100_RS06055 PF00365 Phosphofructokinase D1100_RS06060 PF00266 Aminotransferase class-V D1100_RS06065 PF00565 Staphylococcal nuclease homologue D1100_RS06070 PF01235 Sodium:alanine symporter family D1100_RS06075 PF01594 AI-2E family transporter D1100_RS06085 PF01136 Peptidase family U32 D1100_RS06085 PF16325 Peptidase family U32 C-terminal domain D1100_RS06090 PF04932 O-Antigen ligase D1100_RS06095 PF00534 Glycosyl transferases group 1 D1100_RS06095 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) D1100_RS06100 PF01467 Cytidylyltransferase-like D1100_RS06105 PF00929 Exonuclease D1100_RS06110 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE D1100_RS06115 PF01476 LysM domain D1100_RS06115 PF01520 N-acetylmuramoyl-L-alanine amidase D1100_RS06120 PF00342 Phosphoglucose isomerase D1100_RS06125 PF04380 Membrane fusogenic activity D1100_RS06150 PF08501 Shikimate dehydrogenase substrate binding domain D1100_RS06150 PF01488 Shikimate / quinate 5-dehydrogenase D1100_RS06150 PF18317 Shikimate 5'-dehydrogenase C-terminal domain D1100_RS06155 PF01300 Telomere recombination D1100_RS06160 PF01396 Topoisomerase DNA binding C4 zinc finger D1100_RS06165 PF04266 ASCH domain D1100_RS06170 PF02631 RecX family D1100_RS06175 PF00154 recA bacterial DNA recombination protein D1100_RS06180 PF01063 Amino-transferase class IV D1100_RS06185 PF00425 chorismate binding enzyme D1100_RS06190 PF02646 RmuC family D1100_RS06195 PF00117 Glutamine amidotransferase class-I D1100_RS06200 PF03625 Domain of unknown function DUF302 D1100_RS06200 PF02537 CrcB-like protein, Camphor Resistance (CrcB) D1100_RS06205 PF00152 tRNA synthetases class II (D, K and N) D1100_RS06205 PF02938 GAD domain D1100_RS06205 PF01336 OB-fold nucleic acid binding domain D1100_RS06210 PF00293 NUDIX domain D1100_RS06215 PF01709 Transcriptional regulator D1100_RS06225 PF02075 Crossover junction endodeoxyribonuclease RuvC D1100_RS06230 PF05193 Peptidase M16 inactive domain D1100_RS06230 PF00675 Insulinase (Peptidase family M16) D1100_RS06235 PF01717 Cobalamin-independent synthase, Catalytic domain D1100_RS06235 PF08267 Cobalamin-independent synthase, N-terminal domain D1100_RS06240 PF00939 Sodium:sulfate symporter transmembrane region D1100_RS06245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1100_RS06245 PF03466 LysR substrate binding domain D1100_RS06250 PF01298 C-lobe and N-lobe beta barrels of Tf-binding protein B D1100_RS06255 PF00849 RNA pseudouridylate synthase D1100_RS06255 PF01479 S4 domain D1100_RS06260 PF01300 Telomere recombination D1100_RS06270 PF04261 Dyp-type peroxidase family D1100_RS06275 PF00425 chorismate binding enzyme D1100_RS06275 PF04715 Anthranilate synthase component I, N terminal region D1100_RS06280 PF00117 Glutamine amidotransferase class-I D1100_RS06285 PF02885 Glycosyl transferase family, helical bundle domain D1100_RS06285 PF00591 Glycosyl transferase family, a/b domain D1100_RS06290 PF08241 Methyltransferase domain D1100_RS06295 PF16036 Chalcone isomerase-like D1100_RS06300 PF04325 Protein of unknown function (DUF465) D1100_RS06305 PF03948 Ribosomal protein L9, C-terminal domain D1100_RS06305 PF01281 Ribosomal protein L9, N-terminal domain D1100_RS06310 PF01084 Ribosomal protein S18 D1100_RS06315 PF00436 Single-strand binding protein family D1100_RS06320 PF01250 Ribosomal protein S6 D1100_RS06325 PF02844 Phosphoribosylglycinamide synthetase, N domain D1100_RS06325 PF02843 Phosphoribosylglycinamide synthetase, C domain D1100_RS06325 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain D1100_RS06330 PF04973 Nicotinamide mononucleotide transporter D1100_RS06335 PF09976 Tetratricopeptide repeat-like domain D1100_RS06340 PF13393 Histidyl-tRNA synthetase D1100_RS06340 PF03129 Anticodon binding domain D1100_RS06345 PF04551 GcpE protein D1100_RS06350 PF13464 Domain of unknown function (DUF4115) D1100_RS06355 PF00916 Sulfate permease family D1100_RS06355 PF01740 STAS domain D1100_RS06360 PF00206 Lyase D1100_RS06360 PF14698 Argininosuccinate lyase C-terminal D1100_RS06365 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D1100_RS06365 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D1100_RS06370 PF00999 Sodium/hydrogen exchanger family D1100_RS06370 PF02254 TrkA-N domain D1100_RS06380 PF03466 LysR substrate binding domain D1100_RS06380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1100_RS06395 PF12833 Helix-turn-helix domain D1100_RS06395 PF06719 AraC-type transcriptional regulator N-terminus D1100_RS06400 PF03466 LysR substrate binding domain D1100_RS06400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1100_RS06405 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D1100_RS06415 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D1100_RS06415 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D1100_RS06420 PF00881 Nitroreductase family D1100_RS06425 PF01914 MarC family integral membrane protein D1100_RS06435 PF00756 Putative esterase D1100_RS06440 PF02798 Glutathione S-transferase, N-terminal domain D1100_RS06455 PF00107 Zinc-binding dehydrogenase D1100_RS06455 PF08240 Alcohol dehydrogenase GroES-like domain D1100_RS06460 PF02028 BCCT, betaine/carnitine/choline family transporter D1100_RS06475 PF03595 Voltage-dependent anion channel D1100_RS06480 PF13419 Haloacid dehalogenase-like hydrolase D1100_RS06490 PF00005 ABC transporter D1100_RS06490 PF00664 ABC transporter transmembrane region D1100_RS06495 PF02664 S-Ribosylhomocysteinase (LuxS) D1100_RS06500 PF02470 MlaD protein D1100_RS06505 PF01475 Ferric uptake regulator family D1100_RS06510 PF00258 Flavodoxin D1100_RS06515 PF01402 Ribbon-helix-helix protein, copG family D1100_RS06520 PF04073 Aminoacyl-tRNA editing domain D1100_RS06530 PF00860 Permease family D1100_RS06535 PF02635 DsrE/DsrF-like family D1100_RS06545 PF01176 Translation initiation factor 1A / IF-1 D1100_RS06550 PF10144 Bacterial virulence factor haemolysin D1100_RS06555 PF18429 Domain of unknown function (DUF5609) D1100_RS06560 PF04461 Protein of unknown function (DUF520) D1100_RS06570 PF00343 Carbohydrate phosphorylase D1100_RS06575 PF17874 MalT-like TPR region D1100_RS06575 PF00196 Bacterial regulatory proteins, luxR family D1100_RS06580 PF07148 Maltose operon periplasmic protein precursor (MalM) D1100_RS06585 PF02264 LamB porin D1100_RS06590 PF00005 ABC transporter D1100_RS06590 PF17912 MalK OB fold domain D1100_RS06595 PF01547 Bacterial extracellular solute-binding protein D1100_RS06600 PF00528 Binding-protein-dependent transport system inner membrane component D1100_RS06600 PF14785 Maltose transport system permease protein MalF P2 domain D1100_RS06605 PF00528 Binding-protein-dependent transport system inner membrane component D1100_RS06610 PF02446 4-alpha-glucanotransferase D1100_RS06615 PF02554 Carbon starvation protein CstA D1100_RS06620 PF01026 TatD related DNase D1100_RS06625 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D1100_RS06625 PF07992 Pyridine nucleotide-disulphide oxidoreductase D1100_RS06630 PF03350 Uncharacterized protein family, UPF0114 D1100_RS06635 PF00881 Nitroreductase family D1100_RS06650 PF00005 ABC transporter D1100_RS06655 PF01116 Fructose-bisphosphate aldolase class-II D1100_RS06660 PF00162 Phosphoglycerate kinase D1100_RS06665 PF00939 Sodium:sulfate symporter transmembrane region D1100_RS06670 PF00939 Sodium:sulfate symporter transmembrane region D1100_RS06675 PF00939 Sodium:sulfate symporter transmembrane region D1100_RS06680 PF00204 DNA gyrase B D1100_RS06680 PF00986 DNA gyrase B subunit, carboxyl terminus D1100_RS06680 PF01751 Toprim domain D1100_RS06680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1100_RS06685 PF00512 His Kinase A (phospho-acceptor) domain D1100_RS06685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1100_RS06690 PF00486 Transcriptional regulatory protein, C terminal D1100_RS06690 PF00072 Response regulator receiver domain D1100_RS06695 PF00005 ABC transporter D1100_RS06700 PF00528 Binding-protein-dependent transport system inner membrane component D1100_RS06705 PF00528 Binding-protein-dependent transport system inner membrane component D1100_RS06710 PF12849 PBP superfamily domain D1100_RS06715 PF00376 MerR family regulatory protein D1100_RS06715 PF09278 MerR, DNA binding D1100_RS06725 PF00403 Heavy-metal-associated domain D1100_RS06730 PF00403 Heavy-metal-associated domain D1100_RS06735 PF00106 short chain dehydrogenase D1100_RS06740 PF00881 Nitroreductase family D1100_RS06745 PF01343 Peptidase family S49 D1100_RS06750 PF00445 Ribonuclease T2 family D1100_RS06755 PF10263 SprT-like family D1100_RS06755 PF17283 SprT-like zinc ribbon domain D1100_RS06760 PF07992 Pyridine nucleotide-disulphide oxidoreductase D1100_RS06765 PF09371 Tex-like protein N-terminal domain D1100_RS06765 PF00575 S1 RNA binding domain D1100_RS06765 PF17674 HHH domain D1100_RS06765 PF16921 Tex protein YqgF-like domain D1100_RS06775 PF04055 Radical SAM superfamily D1100_RS06800 PF00749 tRNA synthetases class I (E and Q), catalytic domain D1100_RS06810 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system D1100_RS06815 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system D1100_RS06820 PF03966 Trm112p-like protein D1100_RS06825 PF02606 Tetraacyldisaccharide-1-P 4'-kinase D1100_RS06830 PF07724 AAA domain (Cdc48 subfamily) D1100_RS06830 PF10431 C-terminal, D2-small domain, of ClpB protein D1100_RS06830 PF06689 ClpX C4-type zinc finger D1100_RS06835 PF00574 Clp protease D1100_RS06840 PF02657 Fe-S metabolism associated domain D1100_RS06855 PF00929 Exonuclease D1100_RS06860 PF00005 ABC transporter D1100_RS06860 PF12848 ABC transporter D1100_RS06865 PF02627 Carboxymuconolactone decarboxylase family D1100_RS06880 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D1100_RS06885 PF01722 BolA-like protein D1100_RS06895 PF05494 MlaC protein D1100_RS06900 PF02470 MlaD protein D1100_RS06905 PF02405 Permease MlaE D1100_RS06910 PF00005 ABC transporter D1100_RS06915 PF00595 PDZ domain D1100_RS06920 PF01370 NAD dependent epimerase/dehydratase family D1100_RS06920 PF08338 Domain of unknown function (DUF1731) D1100_RS06925 PF01316 Arginine repressor, DNA binding domain D1100_RS06925 PF02863 Arginine repressor, C-terminal domain D1100_RS06930 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain D1100_RS06930 PF00056 lactate/malate dehydrogenase, NAD binding domain D1100_RS06940 PF05191 Adenylate kinase, active site lid D1100_RS06950 PF07690 Major Facilitator Superfamily D1100_RS06955 PF01370 NAD dependent epimerase/dehydratase family D1100_RS06960 PF00533 BRCA1 C Terminus (BRCT) domain D1100_RS06960 PF01653 NAD-dependent DNA ligase adenylation domain D1100_RS06960 PF03120 NAD-dependent DNA ligase OB-fold domain D1100_RS06960 PF03119 NAD-dependent DNA ligase C4 zinc finger domain D1100_RS06960 PF12826 Helix-hairpin-helix motif D1100_RS06965 PF04354 ZipA, C-terminal FtsZ-binding domain D1100_RS06980 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain D1100_RS06980 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D1100_RS06990 PF01177 Asp/Glu/Hydantoin racemase D1100_RS06995 PF07690 Major Facilitator Superfamily D1100_RS07000 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase D1100_RS07005 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain D1100_RS07005 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain D1100_RS07010 PF00459 Inositol monophosphatase family D1100_RS07015 PF00293 NUDIX domain D1100_RS07020 PF01479 S4 domain D1100_RS07025 PF01430 Hsp33 protein D1100_RS07030 PF03605 Anaerobic c4-dicarboxylate membrane transporter D1100_RS07035 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D1100_RS07035 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D1100_RS07040 PF00696 Amino acid kinase family D1100_RS07045 PF00367 phosphotransferase system, EIIB D1100_RS07045 PF02378 Phosphotransferase system, EIIC D1100_RS07050 PF00005 ABC transporter D1100_RS07055 PF00528 Binding-protein-dependent transport system inner membrane component D1100_RS07060 PF00381 PTS HPr component phosphorylation site D1100_RS07065 PF00391 PEP-utilising enzyme, mobile domain D1100_RS07065 PF02896 PEP-utilising enzyme, TIM barrel domain D1100_RS07065 PF05524 PEP-utilising enzyme, N-terminal D1100_RS07070 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 D1100_RS07075 PF01938 TRAM domain D1100_RS07075 PF04055 Radical SAM superfamily D1100_RS07075 PF00919 Uncharacterized protein family UPF0004 D1100_RS07080 PF13361 UvrD-like helicase C-terminal domain D1100_RS07080 PF00580 UvrD/REP helicase N-terminal domain D1100_RS07085 PF02492 CobW/HypB/UreG, nucleotide-binding domain D1100_RS07090 PF01924 Hydrogenase formation hypA family D1100_RS07095 PF02769 AIR synthase related protein, C-terminal domain D1100_RS07095 PF00586 AIR synthase related protein, N-terminal domain D1100_RS07100 PF07503 HypF finger D1100_RS07100 PF01300 Telomere recombination D1100_RS07100 PF17788 HypF Kae1-like domain D1100_RS07100 PF00708 Acylphosphatase D1100_RS07105 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit D1100_RS07105 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal D1100_RS07110 PF13247 4Fe-4S dicluster domain D1100_RS07115 PF03916 Polysulphide reductase, NrfD D1100_RS07120 PF00374 Nickel-dependent hydrogenase D1100_RS07125 PF01750 Hydrogenase maturation protease D1100_RS07130 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE D1100_RS07135 PF01455 HupF/HypC family D1100_RS07140 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA D1100_RS07175 PF17757 UvrB interaction domain D1100_RS07175 PF03461 TRCF domain D1100_RS07175 PF00271 Helicase conserved C-terminal domain D1100_RS07175 PF00270 DEAD/DEAH box helicase D1100_RS07175 PF02559 CarD-like/TRCF domain D1100_RS07180 PF17432 Domain of unknown function (DUF3458_C) ARM repeats D1100_RS07180 PF01433 Peptidase family M1 domain D1100_RS07180 PF11940 Domain of unknown function (DUF3458) Ig-like fold D1100_RS07185 PF02660 Glycerol-3-phosphate acyltransferase D1100_RS07190 PF02152 Dihydroneopterin aldolase D1100_RS07195 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region D1100_RS07195 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D1100_RS07200 PF18075 FtsX extracellular domain D1100_RS07205 PF00005 ABC transporter D1100_RS07210 PF02881 SRP54-type protein, helical bundle domain D1100_RS07210 PF00448 SRP54-type protein, GTPase domain D1100_RS07220 PF04269 Protein of unknown function, DUF440 D1100_RS07225 PF01613 Flavin reductase like domain D1100_RS07230 PF03848 Tellurite resistance protein TehB D1100_RS07230 PF09313 Domain of unknown function (DUF1971) D1100_RS07235 PF00528 Binding-protein-dependent transport system inner membrane component D1100_RS07240 PF00528 Binding-protein-dependent transport system inner membrane component D1100_RS07245 PF00497 Bacterial extracellular solute-binding proteins, family 3 D1100_RS07250 PF00005 ABC transporter D1100_RS07255 PF01161 Phosphatidylethanolamine-binding protein D1100_RS07260 PF01699 Sodium/calcium exchanger protein D1100_RS07265 PF01381 Helix-turn-helix D1100_RS07275 PF11412 Disulphide bond corrector protein DsbC D1100_RS07275 PF02683 Cytochrome C biogenesis protein transmembrane region D1100_RS07275 PF13098 Thioredoxin-like domain D1100_RS07280 PF04315 Elongation factor P hydroxylase D1100_RS07285 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D1100_RS07290 PF04348 LppC putative lipoprotein D1100_RS07295 PF02021 Uncharacterised protein family UPF0102 D1100_RS07300 PF13580 SIS domain D1100_RS07305 PF04972 BON domain D1100_RS07315 PF01464 Transglycosylase SLT domain D1100_RS07315 PF00497 Bacterial extracellular solute-binding proteins, family 3 D1100_RS07335 PF01578 Cytochrome C assembly protein D1100_RS07335 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal D1100_RS07340 PF03100 CcmE D1100_RS07345 PF04995 Heme exporter protein D (CcmD) D1100_RS07350 PF01578 Cytochrome C assembly protein D1100_RS07355 PF03379 CcmB protein D1100_RS07360 PF00005 ABC transporter D1100_RS07365 PF00308 Bacterial dnaA protein D1100_RS07390 PF01177 Asp/Glu/Hydantoin racemase D1100_RS07395 PF04345 Chorismate lyase D1100_RS07400 PF01048 Phosphorylase superfamily D1100_RS07405 PF01037 Lrp/AsnC ligand binding domain D1100_RS07405 PF13404 AsnC-type helix-turn-helix domain D1100_RS07410 PF03590 Aspartate-ammonia ligase D1100_RS07430 PF07690 Major Facilitator Superfamily D1100_RS07435 PF04545 Sigma-70, region 4 D1100_RS07435 PF04542 Sigma-70 region 2 D1100_RS07435 PF00140 Sigma-70 factor, region 1.2 D1100_RS07440 PF01794 Ferric reductase like transmembrane component D1100_RS07445 PF00174 Oxidoreductase molybdopterin binding domain D1100_RS07450 PF08281 Sigma-70, region 4 D1100_RS07450 PF04542 Sigma-70 region 2 D1100_RS07460 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D1100_RS07460 PF03129 Anticodon binding domain D1100_RS07460 PF04073 Aminoacyl-tRNA editing domain D1100_RS07475 PF00271 Helicase conserved C-terminal domain D1100_RS07475 PF17191 RecG wedge domain D1100_RS07475 PF00270 DEAD/DEAH box helicase D1100_RS07480 PF01192 RNA polymerase Rpb6 D1100_RS07485 PF02824 TGS domain D1100_RS07485 PF13291 ACT domain D1100_RS07485 PF04607 Region found in RelA / SpoT proteins D1100_RS07490 PF00378 Enoyl-CoA hydratase/isomerase D1100_RS07495 PF14814 Bifunctional transglycosylase second domain D1100_RS07495 PF00912 Transglycosylase D1100_RS07495 PF00905 Penicillin binding protein transpeptidase domain D1100_RS07500 PF00444 Ribosomal protein L36 D1100_RS07505 PF01197 Ribosomal protein L31 D1100_RS07510 PF00834 Ribulose-phosphate 3 epimerase family D1100_RS07515 PF00550 Phosphopantetheine attachment site D1100_RS07535 PF02618 YceG-like family D1100_RS07540 PF02223 Thymidylate kinase D1100_RS07545 PF09115 DNA polymerase III, delta subunit, C terminal D1100_RS07550 PF06629 MltA-interacting protein MipA D1100_RS07555 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D1100_RS07560 PF02687 FtsX-like permease family D1100_RS07560 PF12704 MacB-like periplasmic core domain D1100_RS07560 PF00005 ABC transporter D1100_RS07570 PF01026 TatD related DNase D1100_RS07575 PF07509 Protein of unknown function (DUF1523) D1100_RS07580 PF00149 Calcineurin-like phosphoesterase D1100_RS07585 PF00535 Glycosyl transferase family 2 D1100_RS07590 PF04304 Protein of unknown function (DUF454) D1100_RS07595 PF02899 Phage integrase, N-terminal SAM-like domain D1100_RS07595 PF00589 Phage integrase family D1100_RS07600 PF17347 Family of unknown function (DUF5377) D1100_RS07605 PF08241 Methyltransferase domain D1100_RS07610 PF05746 DALR anticodon binding domain D1100_RS07610 PF02092 Glycyl-tRNA synthetase beta subunit D1100_RS07620 PF04480 Protein of unknown function (DUF559) D1100_RS07625 PF02091 Glycyl-tRNA synthetase alpha subunit D1100_RS07635 PF01568 Molydopterin dinucleotide binding domain D1100_RS07635 PF18364 Molybdopterin oxidoreductase N-terminal domain D1100_RS07635 PF00384 Molybdopterin oxidoreductase D1100_RS07640 PF02613 Nitrate reductase delta subunit D1100_RS07655 PF00127 Copper binding proteins, plastocyanin/azurin family D1100_RS07660 PF00005 ABC transporter D1100_RS07665 PF01032 FecCD transport family D1100_RS07670 PF01497 Periplasmic binding protein D1100_RS07675 PF08007 Cupin superfamily protein D1100_RS07680 PF01245 Ribosomal protein L19 D1100_RS07685 PF01746 tRNA (Guanine-1)-methyltransferase D1100_RS07690 PF05239 PRC-barrel domain D1100_RS07690 PF01782 RimM N-terminal domain D1100_RS07695 PF00886 Ribosomal protein S16 D1100_RS07700 PF01196 Ribosomal protein L17 D1100_RS07705 PF01000 RNA polymerase Rpb3/RpoA insert domain D1100_RS07705 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain D1100_RS07705 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain D1100_RS07710 PF00163 Ribosomal protein S4/S9 N-terminal domain D1100_RS07710 PF01479 S4 domain D1100_RS07715 PF00411 Ribosomal protein S11 D1100_RS07720 PF00416 Ribosomal protein S13/S18 D1100_RS07725 PF00444 Ribosomal protein L36 D1100_RS07730 PF00344 SecY translocase D1100_RS07735 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A D1100_RS07740 PF00327 Ribosomal protein L30p/L7e D1100_RS07745 PF00333 Ribosomal protein S5, N-terminal domain D1100_RS07745 PF03719 Ribosomal protein S5, C-terminal domain D1100_RS07750 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast D1100_RS07755 PF00347 Ribosomal protein L6 D1100_RS07760 PF00410 Ribosomal protein S8 D1100_RS07765 PF00253 Ribosomal protein S14p/S29e D1100_RS07770 PF00281 Ribosomal protein L5 D1100_RS07770 PF00673 ribosomal L5P family C-terminus D1100_RS07775 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 D1100_RS07775 PF00467 KOW motif D1100_RS07780 PF00238 Ribosomal protein L14p/L23e D1100_RS07785 PF00366 Ribosomal protein S17 D1100_RS07790 PF00831 Ribosomal L29 protein D1100_RS07795 PF00252 Ribosomal protein L16p/L10e D1100_RS07800 PF07650 KH domain D1100_RS07800 PF00189 Ribosomal protein S3, C-terminal domain D1100_RS07805 PF00237 Ribosomal protein L22p/L17e D1100_RS07810 PF00203 Ribosomal protein S19 D1100_RS07815 PF00181 Ribosomal Proteins L2, RNA binding domain D1100_RS07815 PF03947 Ribosomal Proteins L2, C-terminal domain D1100_RS07820 PF00276 Ribosomal protein L23 D1100_RS07825 PF00573 Ribosomal protein L4/L1 family D1100_RS07830 PF00297 Ribosomal protein L3 D1100_RS07835 PF00338 Ribosomal protein S10p/S20e D1100_RS07845 PF00206 Lyase D1100_RS07845 PF10415 Fumarase C C-terminus D1100_RS07850 PF01979 Amidohydrolase family D1100_RS07855 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase D1100_RS07860 PF00701 Dihydrodipicolinate synthetase family D1100_RS07865 PF00480 ROK family D1100_RS07870 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase D1100_RS07875 PF02348 Cytidylyltransferase D1100_RS07875 PF13472 GDSL-like Lipase/Acylhydrolase family D1100_RS07880 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D1100_RS07880 PF16582 Middle domain of thiamine pyrophosphate D1100_RS07880 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D1100_RS07885 PF00561 alpha/beta hydrolase fold D1100_RS07895 PF13335 Magnesium chelatase, subunit ChlI C-terminal D1100_RS07895 PF01078 Magnesium chelatase, subunit ChlI D1100_RS07900 PF01381 Helix-turn-helix D1100_RS07905 PF01494 FAD binding domain D1100_RS07910 PF00149 Calcineurin-like phosphoesterase D1100_RS07910 PF02872 5'-nucleotidase, C-terminal domain D1100_RS07925 PF00448 SRP54-type protein, GTPase domain D1100_RS07925 PF02881 SRP54-type protein, helical bundle domain D1100_RS07925 PF02978 Signal peptide binding domain D1100_RS07945 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D1100_RS07945 PF00529 HlyD membrane-fusion protein of T1SS D1100_RS07950 PF03412 Peptidase C39 family D1100_RS07950 PF00005 ABC transporter D1100_RS07950 PF00664 ABC transporter transmembrane region D1100_RS07970 PF00589 Phage integrase family D1100_RS07970 PF02899 Phage integrase, N-terminal SAM-like domain D1100_RS07980 PF00772 DnaB-like helicase N terminal domain D1100_RS07980 PF03796 DnaB-like helicase C terminal domain D1100_RS08010 PF01464 Transglycosylase SLT domain D1100_RS08010 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain D1100_RS08015 PF04362 Bacterial Fe(2+) trafficking D1100_RS08020 PF14815 NUDIX domain D1100_RS08020 PF00730 HhH-GPD superfamily base excision DNA repair protein D1100_RS08025 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D1100_RS08030 PF17746 SfsA N-terminal OB domain D1100_RS08030 PF03749 Sugar fermentation stimulation protein RE domain D1100_RS08035 PF00227 Proteasome subunit D1100_RS08040 PF10431 C-terminal, D2-small domain, of ClpB protein D1100_RS08040 PF07724 AAA domain (Cdc48 subfamily) D1100_RS08040 PF00004 ATPase family associated with various cellular activities (AAA) D1100_RS08060 PF01850 PIN domain D1100_RS08065 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin D1100_RS08075 PF04998 RNA polymerase Rpb1, domain 5 D1100_RS08075 PF05000 RNA polymerase Rpb1, domain 4 D1100_RS08075 PF04983 RNA polymerase Rpb1, domain 3 D1100_RS08075 PF00623 RNA polymerase Rpb1, domain 2 D1100_RS08075 PF04997 RNA polymerase Rpb1, domain 1 D1100_RS08080 PF04561 RNA polymerase Rpb2, domain 2 D1100_RS08080 PF04563 RNA polymerase beta subunit D1100_RS08080 PF04560 RNA polymerase Rpb2, domain 7 D1100_RS08080 PF00562 RNA polymerase Rpb2, domain 6 D1100_RS08080 PF10385 RNA polymerase beta subunit external 1 domain D1100_RS08080 PF04565 RNA polymerase Rpb2, domain 3 D1100_RS08110 PF16320 Ribosomal protein L7/L12 dimerisation domain D1100_RS08110 PF00542 Ribosomal protein L7/L12 C-terminal domain D1100_RS08115 PF00466 Ribosomal protein L10 D1100_RS08120 PF00687 Ribosomal protein L1p/L10e family D1100_RS08125 PF03946 Ribosomal protein L11, N-terminal domain D1100_RS08125 PF00298 Ribosomal protein L11, RNA binding domain D1100_RS08130 PF00467 KOW motif D1100_RS08130 PF02357 Transcription termination factor nusG D1100_RS08135 PF00584 SecE/Sec61-gamma subunits of protein translocation complex D1100_RS08145 PF03611 PTS system sugar-specific permease component D1100_RS08150 PF03169 OPT oligopeptide transporter protein D1100_RS08155 PF17782 DprA winged helix domain D1100_RS08155 PF02481 DNA recombination-mediator protein A D1100_RS08160 PF01327 Polypeptide deformylase D1100_RS08165 PF01370 NAD dependent epimerase/dehydratase family D1100_RS08170 PF04575 Protein of unknown function (DUF560) D1100_RS08190 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D1100_RS08190 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase D1100_RS08195 PF00596 Class II Aldolase and Adducin N-terminal domain D1100_RS08200 PF01261 Xylose isomerase-like TIM barrel D1100_RS08205 PF08220 DeoR-like helix-turn-helix domain D1100_RS08205 PF00455 DeoR C terminal sensor domain D1100_RS08215 PF03611 PTS system sugar-specific permease component D1100_RS08220 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D1100_RS08225 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family D1100_RS08235 PF05159 Capsule polysaccharide biosynthesis protein D1100_RS08240 PF05159 Capsule polysaccharide biosynthesis protein D1100_RS08245 PF00497 Bacterial extracellular solute-binding proteins, family 3 D1100_RS08250 PF00005 ABC transporter D1100_RS08255 PF00528 Binding-protein-dependent transport system inner membrane component D1100_RS08260 PF00528 Binding-protein-dependent transport system inner membrane component D1100_RS08265 PF07274 Protein of unknown function (DUF1440) D1100_RS08270 PF00465 Iron-containing alcohol dehydrogenase D1100_RS08275 PF07690 Major Facilitator Superfamily D1100_RS08280 PF00596 Class II Aldolase and Adducin N-terminal domain D1100_RS08285 PF05025 RbsD / FucU transport protein family D1100_RS08290 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D1100_RS08290 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D1100_RS08295 PF02952 L-fucose isomerase, C-terminal domain D1100_RS08295 PF07881 L-fucose isomerase, first N-terminal domain D1100_RS08295 PF07882 L-fucose isomerase, second N-terminal domain D1100_RS08300 PF08220 DeoR-like helix-turn-helix domain D1100_RS08300 PF00455 DeoR C terminal sensor domain D1100_RS08305 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal D1100_RS08305 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain D1100_RS08305 PF02769 AIR synthase related protein, C-terminal domain D1100_RS08330 PF12838 4Fe-4S dicluster domain D1100_RS08330 PF00037 4Fe-4S binding domain D1100_RS08335 PF02613 Nitrate reductase delta subunit D1100_RS08340 PF04976 DMSO reductase anchor subunit (DmsC) D1100_RS08345 PF13247 4Fe-4S dicluster domain D1100_RS08345 PF12800 4Fe-4S binding domain D1100_RS08350 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D1100_RS08350 PF01568 Molydopterin dinucleotide binding domain D1100_RS08350 PF00384 Molybdopterin oxidoreductase D1100_RS08355 PF00294 pfkB family carbohydrate kinase D1100_RS08360 PF13407 Periplasmic binding protein domain D1100_RS08365 PF02653 Branched-chain amino acid transport system / permease component D1100_RS08370 PF00005 ABC transporter D1100_RS08375 PF05025 RbsD / FucU transport protein family D1100_RS08380 PF00356 Bacterial regulatory proteins, lacI family D1100_RS08385 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D1100_RS08385 PF00356 Bacterial regulatory proteins, lacI family D1100_RS08390 PF01202 Shikimate kinase D1100_RS08395 PF02447 GntP family permease D1100_RS08400 PF03830 PTS system sorbose subfamily IIB component D1100_RS08400 PF03610 PTS system fructose IIA component D1100_RS08405 PF03609 PTS system sorbose-specific iic component D1100_RS08410 PF03613 PTS system mannose/fructose/sorbose family IID component D1100_RS08420 PF02810 SEC-C motif D1100_RS08425 PF00497 Bacterial extracellular solute-binding proteins, family 3 D1100_RS08435 PF01134 Glucose inhibited division protein A D1100_RS08435 PF13932 GidA associated domain D1100_RS08440 PF02527 rRNA small subunit methyltransferase G D1100_RS08450 PF00119 ATP synthase A chain D1100_RS08455 PF00137 ATP synthase subunit C D1100_RS08460 PF00430 ATP synthase B/B' CF(0) D1100_RS08465 PF00213 ATP synthase delta (OSCP) subunit D1100_RS08470 PF00306 ATP synthase alpha/beta chain, C terminal domain D1100_RS08470 PF02874 ATP synthase alpha/beta family, beta-barrel domain D1100_RS08470 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D1100_RS08475 PF00231 ATP synthase D1100_RS08480 PF02874 ATP synthase alpha/beta family, beta-barrel domain D1100_RS08480 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D1100_RS08485 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain D1100_RS08520 PF04077 DsrH like protein D1100_RS08525 PF02635 DsrE/DsrF-like family D1100_RS08530 PF02635 DsrE/DsrF-like family D1100_RS08535 PF08348 YheO-like PAS domain D1100_RS08535 PF13309 HTH domain D1100_RS08540 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D1100_RS08540 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase D1100_RS08545 PF04102 SlyX D1100_RS08555 PF01048 Phosphorylase superfamily D1100_RS08560 PF18693 TRAM domain D1100_RS08560 PF04055 Radical SAM superfamily D1100_RS08560 PF00919 Uncharacterized protein family UPF0004 D1100_RS08565 PF18071 HMW1C N-terminal D1100_RS08565 PF18254 HMW1 domain 2 D1100_RS08580 PF08220 DeoR-like helix-turn-helix domain D1100_RS08580 PF00455 DeoR C terminal sensor domain D1100_RS08585 PF01380 SIS domain D1100_RS08590 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D1100_RS08590 PF02378 Phosphotransferase system, EIIC D1100_RS08590 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D1100_RS08595 PF01232 Mannitol dehydrogenase Rossmann domain D1100_RS08595 PF08125 Mannitol dehydrogenase C-terminal domain D1100_RS08600 PF05068 Mannitol repressor D1100_RS08605 PF03600 Citrate transporter D1100_RS08605 PF02080 TrkA-C domain D1100_RS08615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1100_RS08615 PF03466 LysR substrate binding domain D1100_RS08620 PF10670 Domain of unknown function (DUF4198) D1100_RS08630 PF01891 Cobalt uptake substrate-specific transmembrane region D1100_RS08640 PF00005 ABC transporter D1100_RS08650 PF00547 Urease, gamma subunit D1100_RS08655 PF00699 Urease beta subunit D1100_RS08660 PF00449 Urease alpha-subunit, N-terminal domain D1100_RS08660 PF01979 Amidohydrolase family D1100_RS08670 PF02814 UreE urease accessory protein, N-terminal domain D1100_RS08670 PF05194 UreE urease accessory protein, C-terminal domain D1100_RS08675 PF01730 UreF D1100_RS08680 PF02492 CobW/HypB/UreG, nucleotide-binding domain D1100_RS08685 PF01774 UreD urease accessory protein D1100_RS08700 PF04175 Protein of unknown function (DUF406) D1100_RS08705 PF00893 Small Multidrug Resistance protein D1100_RS08710 PF01814 Hemerythrin HHE cation binding domain D1100_RS08710 PF04405 Domain of Unknown function (DUF542) D1100_RS08715 PF03313 Serine dehydratase alpha chain D1100_RS08720 PF00528 Binding-protein-dependent transport system inner membrane component D1100_RS08725 PF00005 ABC transporter D1100_RS08730 PF05188 MutS domain II D1100_RS08730 PF05192 MutS domain III D1100_RS08730 PF05190 MutS family domain IV D1100_RS08730 PF00488 MutS domain V D1100_RS08730 PF01624 MutS domain I D1100_RS08740 PF02590 Predicted SPOUT methyltransferase D1100_RS08745 PF03717 Penicillin-binding Protein dimerisation domain D1100_RS08745 PF00905 Penicillin binding protein transpeptidase domain D1100_RS08750 PF01098 Cell cycle protein D1100_RS08755 PF03330 Lytic transglycolase D1100_RS08760 PF00768 D-alanyl-D-alanine carboxypeptidase D1100_RS08760 PF07943 Penicillin-binding protein 5, C-terminal domain D1100_RS08765 PF04359 Protein of unknown function (DUF493) D1100_RS08770 PF03099 Biotin/lipoate A/B protein ligase family D1100_RS08775 PF04055 Radical SAM superfamily D1100_RS08780 PF01741 Large-conductance mechanosensitive channel, MscL D1100_RS08785 PF12724 Flavodoxin domain D1100_RS08790 PF02386 Cation transport protein D1100_RS08795 PF01205 Uncharacterized protein family UPF0029 D1100_RS08795 PF09186 Domain of unknown function (DUF1949) D1100_RS08805 PF00551 Formyl transferase D1100_RS08805 PF02911 Formyl transferase, C-terminal domain D1100_RS08810 PF00005 ABC transporter D1100_RS08815 PF00005 ABC transporter D1100_RS08820 PF01061 ABC-2 type transporter D1100_RS08830 PF02563 Polysaccharide biosynthesis/export protein D1100_RS08840 PF01467 Cytidylyltransferase-like D1100_RS08850 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase D1100_RS08860 PF17311 Family of unknown function (DUF5358) D1100_RS08870 PF02615 Malate/L-lactate dehydrogenase D1100_RS08885 PF01618 MotA/TolQ/ExbB proton channel family D1100_RS08890 PF02472 Biopolymer transport protein ExbD/TolR D1100_RS08895 PF01298 C-lobe and N-lobe beta barrels of Tf-binding protein B D1100_RS08895 PF17483 C-lobe handle domain of Tf-binding protein B D1100_RS08895 PF17484 N-Lobe handle Tf-binding protein B D1100_RS08900 PF00593 TonB dependent receptor D1100_RS08900 PF07715 TonB-dependent Receptor Plug Domain D1100_RS08915 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D1100_RS08915 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D1100_RS08920 PF00258 Flavodoxin D1100_RS08930 PF03841 L-seryl-tRNA selenium transferase D1100_RS08930 PF12390 Selenocysteine synthase N terminal D1100_RS08935 PF00009 Elongation factor Tu GTP binding domain D1100_RS08935 PF09107 Elongation factor SelB, winged helix D1100_RS08935 PF09106 Elongation factor SelB, winged helix D1100_RS08935 PF03144 Elongation factor Tu domain 2 D1100_RS08940 PF01029 NusB family D1100_RS08940 PF01189 16S rRNA methyltransferase RsmB/F D1100_RS08945 PF02254 TrkA-N domain D1100_RS08945 PF02080 TrkA-C domain D1100_RS08950 PF01649 Ribosomal protein S20 D1100_RS08955 PF03023 Lipid II flippase MurJ D1100_RS08965 PF00202 Aminotransferase class-III D1100_RS08970 PF00953 Glycosyl transferase family 4 D1100_RS08980 PF02350 UDP-N-acetylglucosamine 2-epimerase D1100_RS08985 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D1100_RS08985 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D1100_RS08985 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D1100_RS08995 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family D1100_RS09000 PF01943 Polysaccharide biosynthesis protein D1100_RS09005 PF00970 Oxidoreductase FAD-binding domain D1100_RS09005 PF00175 Oxidoreductase NAD-binding domain D1100_RS09005 PF00111 2Fe-2S iron-sulfur cluster binding domain D1100_RS09010 PF03063 Prismane/CO dehydrogenase family D1100_RS09015 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 D1100_RS09020 PF06899 WzyE protein, O-antigen assembly polymerase D1100_RS09025 PF03808 Glycosyl transferase WecB/TagA/CpsF family D1100_RS09085 PF02899 Phage integrase, N-terminal SAM-like domain D1100_RS09085 PF00589 Phage integrase family D1100_RS09095 PF01171 PP-loop family D1100_RS09095 PF11734 TilS substrate C-terminal domain D1100_RS09095 PF09179 TilS substrate binding domain D1100_RS09100 PF01523 Putative modulator of DNA gyrase D1100_RS09120 PF01380 SIS domain D1100_RS09125 PF03702 Anhydro-N-acetylmuramic acid kinase D1100_RS09135 PF02537 CrcB-like protein, Camphor Resistance (CrcB) D1100_RS09140 PF03605 Anaerobic c4-dicarboxylate membrane transporter D1100_RS09145 PF01678 Diaminopimelate epimerase D1100_RS09150 PF00152 tRNA synthetases class II (D, K and N) D1100_RS09155 PF00890 FAD binding domain D1100_RS09155 PF02910 Fumarate reductase flavoprotein C-term D1100_RS09160 PF13085 2Fe-2S iron-sulfur cluster binding domain D1100_RS09160 PF13183 4Fe-4S dicluster domain D1100_RS09165 PF02300 Fumarate reductase subunit C D1100_RS09170 PF02313 Fumarate reductase subunit D D1100_RS09180 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain D1100_RS09180 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D1100_RS09185 PF00043 Glutathione S-transferase, C-terminal domain D1100_RS09185 PF02798 Glutathione S-transferase, N-terminal domain D1100_RS09190 PF04055 Radical SAM superfamily D1100_RS09200 PF03937 Flavinator of succinate dehydrogenase D1100_RS09205 PF02401 LytB protein D1100_RS09210 PF01252 Signal peptidase (SPase) II D1100_RS09215 PF00543 Nitrogen regulatory protein P-II D1100_RS09220 PF00994 Probable molybdopterin binding domain D1100_RS09225 PF03918 Cytochrome C biogenesis protein D1100_RS09230 PF03918 Cytochrome C biogenesis protein D1100_RS09235 PF08534 Redoxin D1100_RS09240 PF00485 Phosphoribulokinase / Uridine kinase family D1100_RS09265 PF03143 Elongation factor Tu C-terminal domain D1100_RS09265 PF03144 Elongation factor Tu domain 2 D1100_RS09265 PF00009 Elongation factor Tu GTP binding domain D1100_RS09270 PF06426 Serine acetyltransferase, N-terminal D1100_RS09270 PF00132 Bacterial transferase hexapeptide (six repeats) D1100_RS09275 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus D1100_RS09275 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus D1100_RS09280 PF02556 Preprotein translocase subunit SecB D1100_RS09285 PF00581 Rhodanese-like domain D1100_RS09290 PF05697 Bacterial trigger factor protein (TF) D1100_RS09290 PF05698 Bacterial trigger factor protein (TF) C-terminus D1100_RS09290 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D1100_RS09295 PF01476 LysM domain D1100_RS09300 PF04364 DNA polymerase III chi subunit, HolC D1100_RS09305 PF13673 Acetyltransferase (GNAT) domain D1100_RS09320 PF10458 Valyl tRNA synthetase tRNA binding arm D1100_RS09320 PF00133 tRNA synthetases class I (I, L, M and V) D1100_RS09320 PF08264 Anticodon-binding domain of tRNA D1100_RS09330 PF14821 Threonine synthase N terminus D1100_RS09330 PF00291 Pyridoxal-phosphate dependent enzyme D1100_RS09335 PF02142 MGS-like domain D1100_RS09340 PF12805 FUSC-like inner membrane protein yccS D1100_RS09355 PF00210 Ferritin-like domain D1100_RS09360 PF02678 Pirin D1100_RS09360 PF17954 Quercetinase C-terminal cupin domain D1100_RS09370 PF05167 Uncharacterised ACR (DUF711) D1100_RS09375 PF12631 MnmE helical domain D1100_RS09375 PF10396 GTP-binding protein TrmE N-terminus D1100_RS09375 PF01926 50S ribosome-binding GTPase D1100_RS09380 PF08534 Redoxin D1100_RS09385 PF01553 Acyltransferase D1100_RS09390 PF07732 Multicopper oxidase D1100_RS09390 PF07731 Multicopper oxidase D1100_RS09395 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit D1100_RS09405 PF08543 Phosphomethylpyrimidine kinase D1100_RS09425 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D1100_RS09425 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D1100_RS09430 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) D1100_RS09435 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D1100_RS09435 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D1100_RS09435 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D1100_RS09435 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D1100_RS09440 PF00585 C-terminal regulatory domain of Threonine dehydratase D1100_RS09440 PF00291 Pyridoxal-phosphate dependent enzyme D1100_RS09445 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D1100_RS09455 PF00230 Major intrinsic protein D1100_RS09465 PF01980 tRNA-methyltransferase O D1100_RS09465 PF18389 TrmO C-terminal domain D1100_RS09470 PF06250 YhcG PDDEXK nuclease domain D1100_RS09470 PF17761 DUF1016 N-terminal domain D1100_RS09475 PF01040 UbiA prenyltransferase family D1100_RS09480 PF01521 Iron-sulphur cluster biosynthesis D1100_RS09490 PF16363 GDP-mannose 4,6 dehydratase D1100_RS09495 PF00483 Nucleotidyl transferase D1100_RS09500 PF04321 RmlD substrate binding domain D1100_RS09505 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase D1100_RS09515 PF00535 Glycosyl transferase family 2 D1100_RS09520 PF00535 Glycosyl transferase family 2 D1100_RS09530 PF00535 Glycosyl transferase family 2 D1100_RS09535 PF02397 Bacterial sugar transferase D1100_RS09540 PF01165 Ribosomal protein S21 D1100_RS09545 PF08278 DNA primase DnaG DnaB-binding D1100_RS09545 PF08275 DNA primase catalytic core, N-terminal domain D1100_RS09545 PF01807 CHC2 zinc finger D1100_RS09545 PF10410 DnaB-helicase binding domain of primase D1100_RS09550 PF04546 Sigma-70, non-essential region D1100_RS09550 PF03979 Sigma-70 factor, region 1.1 D1100_RS09550 PF00140 Sigma-70 factor, region 1.2 D1100_RS09550 PF04542 Sigma-70 region 2 D1100_RS09550 PF04539 Sigma-70 region 3 D1100_RS09550 PF04545 Sigma-70, region 4 D1100_RS09555 PF01479 S4 domain D1100_RS09555 PF00579 tRNA synthetases class I (W and Y) D1100_RS09565 PF17876 Cold shock domain D1100_RS09565 PF00773 RNB domain D1100_RS09565 PF00575 S1 RNA binding domain D1100_RS09565 PF08206 Ribonuclease B OB domain D1100_RS09565 PF08461 Ribonuclease R winged-helix domain D1100_RS09570 PF00578 AhpC/TSA family D1100_RS09575 PF00440 Bacterial regulatory proteins, tetR family D1100_RS09580 PF03466 LysR substrate binding domain D1100_RS09580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1100_RS09585 PF00462 Glutaredoxin D1100_RS09585 PF08534 Redoxin D1100_RS09595 PF01297 Zinc-uptake complex component A periplasmic D1100_RS09600 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase D1100_RS09605 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family D1100_RS09615 PF12111 Polyribonucleotide phosphorylase C terminal D1100_RS09615 PF10150 Ribonuclease E/G family D1100_RS09615 PF00575 S1 RNA binding domain D1100_RS09630 PF02525 Flavodoxin-like fold D1100_RS09635 PF13187 4Fe-4S dicluster domain D1100_RS09635 PF12838 4Fe-4S dicluster domain D1100_RS09645 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D1100_RS09645 PF00384 Molybdopterin oxidoreductase D1100_RS09645 PF01568 Molydopterin dinucleotide binding domain D1100_RS09645 PF10518 TAT (twin-arginine translocation) pathway signal sequence D1100_RS09650 PF12838 4Fe-4S dicluster domain D1100_RS09650 PF12800 4Fe-4S binding domain D1100_RS09655 PF12837 4Fe-4S binding domain D1100_RS09655 PF12801 4Fe-4S binding domain D1100_RS09660 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) D1100_RS09665 PF03264 NapC/NirT cytochrome c family, N-terminal region D1100_RS09670 PF14849 YidC periplasmic domain D1100_RS09670 PF02096 60Kd inner membrane protein D1100_RS09675 PF03061 Thioesterase superfamily D1100_RS09680 PF13183 4Fe-4S dicluster domain D1100_RS09680 PF01565 FAD binding domain D1100_RS09680 PF02913 FAD linked oxidases, C-terminal domain D1100_RS09685 PF00691 OmpA family D1100_RS09685 PF01389 OmpA-like transmembrane domain D1100_RS09690 PF13407 Periplasmic binding protein domain D1100_RS09695 PF00005 ABC transporter D1100_RS09700 PF02653 Branched-chain amino acid transport system / permease component D1100_RS09720 PF06039 Malate:quinone oxidoreductase (Mqo) D1100_RS09725 PF00501 AMP-binding enzyme D1100_RS09730 PF00248 Aldo/keto reductase family D1100_RS09735 PF04175 Protein of unknown function (DUF406) D1100_RS09740 PF03222 Tryptophan/tyrosine permease family D1100_RS09750 PF04262 Glutamate-cysteine ligase D1100_RS09750 PF18419 ATP-grasp-like domain D1100_RS09750 PF02655 ATP-grasp domain D1100_RS09755 PF01420 Type I restriction modification DNA specificity domain D1100_RS09760 PF00589 Phage integrase family D1100_RS09760 PF02899 Phage integrase, N-terminal SAM-like domain D1100_RS09765 PF01420 Type I restriction modification DNA specificity domain D1100_RS09775 PF12161 HsdM N-terminal domain D1100_RS09775 PF02384 N-6 DNA Methylase D1100_RS09780 PF08463 EcoEI R protein C-terminal D1100_RS09780 PF00271 Helicase conserved C-terminal domain D1100_RS09780 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) D1100_RS09780 PF04851 Type III restriction enzyme, res subunit D1100_RS09785 PF02666 Phosphatidylserine decarboxylase D1100_RS09795 PF08525 Opacity-associated protein A N-terminal motif D1100_RS09795 PF04225 Opacity-associated protein A LysM-like domain D1100_RS09805 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D1100_RS09810 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D1100_RS09815 PF00164 Ribosomal protein S12/S23 D1100_RS09820 PF00177 Ribosomal protein S7p/S5e D1100_RS09825 PF00679 Elongation factor G C-terminus D1100_RS09825 PF14492 Elongation Factor G, domain II D1100_RS09825 PF03764 Elongation factor G, domain IV D1100_RS09825 PF00009 Elongation factor Tu GTP binding domain D1100_RS09825 PF03144 Elongation factor Tu domain 2 D1100_RS09830 PF03143 Elongation factor Tu C-terminal domain D1100_RS09830 PF00009 Elongation factor Tu GTP binding domain D1100_RS09830 PF03144 Elongation factor Tu domain 2 D1100_RS09840 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain D1100_RS09845 PF01225 Mur ligase family, catalytic domain D1100_RS09845 PF08245 Mur ligase middle domain D1100_RS09845 PF02875 Mur ligase family, glutamate ligase domain D1100_RS09850 PF00005 ABC transporter D1100_RS09850 PF08402 TOBE domain D1100_RS09855 PF00528 Binding-protein-dependent transport system inner membrane component D1100_RS09865 PF02382 N-terminal domain in RTX protein D1100_RS09865 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) D1100_RS09865 PF08339 RTX C-terminal domain D1100_RS09870 PF03412 Peptidase C39 family D1100_RS09870 PF00005 ABC transporter D1100_RS09870 PF00664 ABC transporter transmembrane region D1100_RS09885 PF01238 Phosphomannose isomerase type I D1100_RS09890 PF06173 Protein of unknown function (DUF986) D1100_RS09895 PF03613 PTS system mannose/fructose/sorbose family IID component D1100_RS09900 PF03609 PTS system sorbose-specific iic component D1100_RS09905 PF03610 PTS system fructose IIA component D1100_RS09905 PF03830 PTS system sorbose subfamily IIB component D1100_RS09915 PF00209 Sodium:neurotransmitter symporter family D1100_RS09920 PF00571 CBS domain D1100_RS09920 PF03471 Transporter associated domain D1100_RS09920 PF01595 Cyclin M transmembrane N-terminal domain D1100_RS09925 PF01578 Cytochrome C assembly protein D1100_RS09930 PF02620 Large ribosomal RNA subunit accumulation protein YceD D1100_RS09935 PF01783 Ribosomal L32p protein family D1100_RS09940 PF02504 Fatty acid synthesis protein D1100_RS09945 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D1100_RS09945 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal D1100_RS09950 PF02390 Putative methyltransferase D1100_RS09955 PF04320 Protein with unknown function (DUF469) D1100_RS09960 PF02325 YGGT family D1100_RS09965 PF02594 Uncharacterised ACR, YggU family COG1872 D1100_RS09970 PF03150 Di-haem cytochrome c peroxidase D1100_RS09970 PF00034 Cytochrome c D1100_RS09970 PF14376 Haem-binding domain D1100_RS09975 PF03831 PhnA domain D1100_RS09975 PF08274 PhnA Zinc-Ribbon D1100_RS09980 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit D1100_RS09985 PF02436 Conserved carboxylase domain D1100_RS09985 PF00682 HMGL-like D1100_RS09985 PF00364 Biotin-requiring enzyme D1100_RS09990 PF04277 Oxaloacetate decarboxylase, gamma chain D1100_RS10020 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D1100_RS10020 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D1100_RS10025 PF00667 FAD binding domain D1100_RS10025 PF00258 Flavodoxin D1100_RS10025 PF00175 Oxidoreductase NAD-binding domain D1100_RS10030 PF00009 Elongation factor Tu GTP binding domain D1100_RS10035 PF01507 Phosphoadenosine phosphosulfate reductase family D1100_RS10040 PF01507 Phosphoadenosine phosphosulfate reductase family D1100_RS10045 PF10414 Sirohaem synthase dimerisation region D1100_RS10045 PF14824 Sirohaem biosynthesis protein central D1100_RS10045 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D1100_RS10055 PF00528 Binding-protein-dependent transport system inner membrane component D1100_RS10060 PF00528 Binding-protein-dependent transport system inner membrane component D1100_RS10065 PF12857 TOBE-like domain D1100_RS10065 PF17850 CysA C-terminal regulatory domain D1100_RS10065 PF00005 ABC transporter D1100_RS10070 PF01070 FMN-dependent dehydrogenase D1100_RS10075 PF08279 HTH domain D1100_RS10075 PF03099 Biotin/lipoate A/B protein ligase family D1100_RS10075 PF02237 Biotin protein ligase C terminal domain D1100_RS10080 PF01565 FAD binding domain D1100_RS10080 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain D1100_RS10085 PF00691 OmpA family D1100_RS10085 PF01389 OmpA-like transmembrane domain D1100_RS10090 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain D1100_RS10090 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain D1100_RS10095 PF04403 Paraquat-inducible protein A D1100_RS10100 PF01841 Transglutaminase-like superfamily D1100_RS10110 PF00403 Heavy-metal-associated domain D1100_RS10115 PF00465 Iron-containing alcohol dehydrogenase D1100_RS10120 PF03466 LysR substrate binding domain D1100_RS10120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1100_RS10125 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal D1100_RS10125 PF00132 Bacterial transferase hexapeptide (six repeats) D1100_RS10125 PF14602 Hexapeptide repeat of succinyl-transferase D1100_RS10130 PF01220 Dehydroquinase class II D1100_RS10135 PF04488 Glycosyltransferase sugar-binding region containing DXD motif D1100_RS10140 PF00364 Biotin-requiring enzyme D1100_RS10145 PF02785 Biotin carboxylase C-terminal domain D1100_RS10145 PF00289 Biotin carboxylase, N-terminal domain D1100_RS10145 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D1100_RS10150 PF12804 MobA-like NTP transferase domain D1100_RS10155 PF06288 Protein of unknown function (DUF1040) D1100_RS10160 PF01323 DSBA-like thioredoxin domain D1100_RS10165 PF05036 Sporulation related domain D1100_RS10165 PF05036 Sporulation related domain D1100_RS10170 PF04445 Putative SAM-dependent methyltransferase D1100_RS10175 PF02557 D-alanyl-D-alanine carboxypeptidase D1100_RS10180 PF07687 Peptidase dimerisation domain D1100_RS10180 PF01546 Peptidase family M20/M25/M40 D1100_RS10185 PF03960 ArsC family D1100_RS10195 PF00809 Pterin binding enzyme D1100_RS10200 PF00849 RNA pseudouridylate synthase D1100_RS10200 PF01479 S4 domain D1100_RS10210 PF00924 Mechanosensitive ion channel D1100_RS10210 PF05552 Conserved TM helix D1100_RS10215 PF02785 Biotin carboxylase C-terminal domain D1100_RS10215 PF00289 Biotin carboxylase, N-terminal domain D1100_RS10215 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D1100_RS10225 PF16187 Middle or third domain of peptidase_M16 D1100_RS10225 PF05193 Peptidase M16 inactive domain D1100_RS10225 PF00675 Insulinase (Peptidase family M16) D1100_RS10230 PF17946 RecC C-terminal domain D1100_RS10255 PF07977 FabA-like domain D1100_RS10260 PF05362 Lon protease (S16) C-terminal proteolytic domain D1100_RS10260 PF13654 AAA domain D1100_RS10265 PF17414 MatP C-terminal ribbon-helix-helix domain D1100_RS10265 PF06303 MatP N-terminal domain D1100_RS10270 PF00579 tRNA synthetases class I (W and Y) D1100_RS10275 PF13419 Haloacid dehalogenase-like hydrolase D1100_RS10285 PF01790 Prolipoprotein diacylglyceryl transferase D1100_RS10290 PF01925 Sulfite exporter TauE/SafE D1100_RS10295 PF00293 NUDIX domain D1100_RS10305 PF00719 Inorganic pyrophosphatase D1100_RS10310 PF05175 Methyltransferase small domain D1100_RS10315 PF03737 Aldolase/RraA D1100_RS10320 PF01226 Formate/nitrite transporter D1100_RS10340 PF00226 DnaJ domain D1100_RS10340 PF00684 DnaJ central domain D1100_RS10340 PF01556 DnaJ C terminal domain D1100_RS10345 PF00012 Hsp70 protein D1100_RS10350 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D1100_RS10350 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D1100_RS10360 PF13407 Periplasmic binding protein domain D1100_RS10365 PF00005 ABC transporter D1100_RS10370 PF02653 Branched-chain amino acid transport system / permease component D1100_RS10375 PF12833 Helix-turn-helix domain D1100_RS10380 PF01431 Peptidase family M13 D1100_RS10380 PF05649 Peptidase family M13 D1100_RS10385 PF10571 Uncharacterised protein family UPF0547 D1100_RS10390 PF00474 Sodium:solute symporter family D1100_RS10395 PF06196 Protein of unknown function (DUF997) D1100_RS10400 PF01340 Met Apo-repressor, MetJ D1100_RS10405 PF04333 MlaA lipoprotein D1100_RS10410 PF01263 Aldose 1-epimerase D1100_RS10425 PF01522 Polysaccharide deacetylase D1100_RS10425 PF14883 Hypothetical glycosyl hydrolase family 13 D1100_RS10430 PF00535 Glycosyl transferase family 2 D1100_RS10440 PF00121 Triosephosphate isomerase D1100_RS10445 PF01142 tRNA pseudouridine synthase D (TruD) D1100_RS10450 PF01975 Survival protein SurE D1100_RS10455 PF09335 SNARE associated Golgi protein D1100_RS10470 PF01476 LysM domain D1100_RS10470 PF01551 Peptidase family M23 D1100_RS10475 PF03352 Methyladenine glycosylase D1100_RS10485 PF07670 Nucleoside recognition D1100_RS10490 PF07670 Nucleoside recognition D1100_RS10495 PF00762 Ferrochelatase D1100_RS10500 PF00468 Ribosomal protein L34 D1100_RS10505 PF00825 Ribonuclease P D1100_RS10510 PF01809 Putative membrane protein insertion efficiency factor D1100_RS10515 PF03951 Glutamine synthetase, beta-Grasp domain D1100_RS10515 PF00120 Glutamine synthetase, catalytic domain D1100_RS10520 PF00149 Calcineurin-like phosphoesterase D1100_RS10525 PF00293 NUDIX domain D1100_RS10530 PF06146 Phosphate-starvation-inducible E D1100_RS10535 PF01648 4'-phosphopantetheinyl transferase superfamily D1100_RS10540 PF00892 EamA-like transporter family D1100_RS10545 PF06965 Na+/H+ antiporter 1 D1100_RS10555 PF02580 D-Tyr-tRNA(Tyr) deacylase D1100_RS10560 PF03631 Virulence factor BrkB D1100_RS10565 PF00171 Aldehyde dehydrogenase family D1100_RS10575 PF07715 TonB-dependent Receptor Plug Domain D1100_RS10575 PF00593 TonB dependent receptor D1100_RS10595 PF01119 DNA mismatch repair protein, C-terminal domain D1100_RS10595 PF08676 MutL C terminal dimerisation domain D1100_RS10600 PF08240 Alcohol dehydrogenase GroES-like domain D1100_RS10600 PF00107 Zinc-binding dehydrogenase D1100_RS10610 PF17209 Hfq protein D1100_RS10615 PF01926 50S ribosome-binding GTPase D1100_RS10615 PF16360 GTP-binding GTPase Middle Region D1100_RS10615 PF13167 GTP-binding GTPase N-terminal D1100_RS10620 PF03641 Possible lysine decarboxylase D1100_RS10625 PF03819 MazG nucleotide pyrophosphohydrolase domain D1100_RS10630 PF00027 Cyclic nucleotide-binding domain D1100_RS10630 PF13545 Crp-like helix-turn-helix domain D1100_RS10635 PF06794 Uncharacterised protein family (UPF0270) D1100_RS10640 PF00440 Bacterial regulatory proteins, tetR family D1100_RS10645 PF00692 dUTPase D1100_RS10650 PF02441 Flavoprotein D1100_RS10650 PF04127 DNA / pantothenate metabolism flavoprotein D1100_RS10655 PF04002 RadC-like JAB domain D1100_RS10660 PF00830 Ribosomal L28 family D1100_RS10665 PF00471 Ribosomal protein L33 D1100_RS10675 PF00202 Aminotransferase class-III D1100_RS10680 PF00282 Pyridoxal-dependent decarboxylase conserved domain D1100_RS10685 PF01206 Sulfurtransferase TusA D1100_RS10690 PF04143 Sulphur transport D1100_RS10695 PF04219 Protein of unknown function, DUF D1100_RS10700 PF05958 tRNA (Uracil-5-)-methyltransferase D1100_RS10715 PF01544 CorA-like Mg2+ transporter protein D1100_RS10720 PF01209 ubiE/COQ5 methyltransferase family D1100_RS10730 PF03109 ABC1 family D1100_RS10735 PF02416 mttA/Hcf106 family D1100_RS10745 PF00902 Sec-independent protein translocase protein (TatC) D1100_RS10750 PF00490 Delta-aminolevulinic acid dehydratase D1100_RS10760 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain D1100_RS10760 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain D1100_RS10760 PF06827 Zinc finger found in FPG and IleRS D1100_RS10765 PF05525 Branched-chain amino acid transport protein D1100_RS10775 PF00698 Acyl transferase domain D1100_RS10780 PF02677 Epoxyqueuosine reductase QueH D1100_RS10785 PF00348 Polyprenyl synthetase D1100_RS10795 PF03358 NADPH-dependent FMN reductase D1100_RS10800 PF07681 DoxX D1100_RS10805 PF00829 Ribosomal prokaryotic L21 protein D1100_RS10810 PF01016 Ribosomal L27 protein D1100_RS10815 PF00892 EamA-like transporter family D1100_RS10820 PF04575 Protein of unknown function (DUF560) D1100_RS10825 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D1100_RS10830 PF00156 Phosphoribosyl transferase domain D1100_RS10835 PF08468 Methyltransferase small domain N-terminal D1100_RS10835 PF05175 Methyltransferase small domain D1100_RS10845 PF00583 Acetyltransferase (GNAT) family D1100_RS10850 PF00271 Helicase conserved C-terminal domain D1100_RS10850 PF00270 DEAD/DEAH box helicase D1100_RS10855 PF01243 Pyridoxamine 5'-phosphate oxidase D1100_RS10855 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region D1100_RS10860 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D1100_RS10865 PF00171 Aldehyde dehydrogenase family D1100_RS10870 PF01184 GPR1/FUN34/yaaH family D1100_RS10875 PF00005 ABC transporter D1100_RS10880 PF01497 Periplasmic binding protein D1100_RS10885 PF01032 FecCD transport family D1100_RS10890 PF07715 TonB-dependent Receptor Plug Domain D1100_RS10890 PF00593 TonB dependent receptor D1100_RS10900 PF01259 SAICAR synthetase D1100_RS10905 PF08029 HisG, C-terminal domain D1100_RS10905 PF01634 ATP phosphoribosyltransferase D1100_RS10910 PF00815 Histidinol dehydrogenase D1100_RS10915 PF00155 Aminotransferase class I and II D1100_RS10925 PF00475 Imidazoleglycerol-phosphate dehydratase D1100_RS10935 PF00117 Glutamine amidotransferase class-I D1100_RS10940 PF00977 Histidine biosynthesis protein D1100_RS10945 PF00977 Histidine biosynthesis protein D1100_RS10950 PF01502 Phosphoribosyl-AMP cyclohydrolase D1100_RS10950 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase D1100_RS10955 PF02592 Putative vitamin uptake transporter D1100_RS10960 PF00557 Metallopeptidase family M24 D1100_RS10970 PF00356 Bacterial regulatory proteins, lacI family D1100_RS10970 PF13407 Periplasmic binding protein domain D1100_RS10975 PF08244 Glycosyl hydrolases family 32 C terminal D1100_RS10975 PF00251 Glycosyl hydrolases family 32 N-terminal domain D1100_RS10980 PF00294 pfkB family carbohydrate kinase D1100_RS10985 PF07732 Multicopper oxidase D1100_RS10990 PF12704 MacB-like periplasmic core domain D1100_RS10990 PF02687 FtsX-like permease family D1100_RS10995 PF00005 ABC transporter D1100_RS11000 PF02687 FtsX-like permease family D1100_RS11000 PF12704 MacB-like periplasmic core domain D1100_RS11005 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D1100_RS11005 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D1100_RS11010 PF00793 DAHP synthetase I family D1100_RS11015 PF13369 Transglutaminase-like superfamily D1100_RS11020 PF13847 Methyltransferase domain D1100_RS11020 PF17827 PrmC N-terminal domain D1100_RS11030 PF03462 PCRF domain D1100_RS11030 PF00472 RF-1 domain