locus-tag class description APJL_RS00005 PF00308 Bacterial dnaA protein APJL_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix APJL_RS00005 PF11638 DnaA N-terminal domain APJL_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain APJL_RS00010 PF02767 DNA polymerase III beta subunit, central domain APJL_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain APJL_RS00015 PF02463 RecF/RecN/SMC N terminal domain APJL_RS00020 PF00080 Copper/zinc superoxide dismutase (SODC) APJL_RS00025 PF01118 Semialdehyde dehydrogenase, NAD binding domain APJL_RS00025 PF02774 Semialdehyde dehydrogenase, dimerisation domain APJL_RS00035 PF02684 Lipid-A-disaccharide synthetase APJL_RS00040 PF01343 Peptidase family S49 APJL_RS00040 PF08496 Peptidase family S49 N-terminal APJL_RS00045 PF02381 MraZ protein, putative antitoxin-like APJL_RS00050 PF01795 MraW methylase family APJL_RS00055 PF04999 Cell division protein FtsL APJL_RS00060 PF00905 Penicillin binding protein transpeptidase domain APJL_RS00060 PF03717 Penicillin-binding Protein dimerisation domain APJL_RS00065 PF08245 Mur ligase middle domain APJL_RS00065 PF02875 Mur ligase family, glutamate ligase domain APJL_RS00065 PF01225 Mur ligase family, catalytic domain APJL_RS00070 PF08245 Mur ligase middle domain APJL_RS00070 PF02875 Mur ligase family, glutamate ligase domain APJL_RS00070 PF01225 Mur ligase family, catalytic domain APJL_RS00075 PF00953 Glycosyl transferase family 4 APJL_RS00075 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 APJL_RS00080 PF02875 Mur ligase family, glutamate ligase domain APJL_RS00080 PF08245 Mur ligase middle domain APJL_RS00085 PF01098 Cell cycle protein APJL_RS00090 PF03033 Glycosyltransferase family 28 N-terminal domain APJL_RS00090 PF04101 Glycosyltransferase family 28 C-terminal domain APJL_RS00095 PF02875 Mur ligase family, glutamate ligase domain APJL_RS00095 PF01225 Mur ligase family, catalytic domain APJL_RS00095 PF08245 Mur ligase middle domain APJL_RS00100 PF01820 D-ala D-ala ligase N-terminus APJL_RS00100 PF07478 D-ala D-ala ligase C-terminus APJL_RS00105 PF03799 Cell division protein FtsQ APJL_RS00105 PF08478 POTRA domain, FtsQ-type APJL_RS00110 PF02491 SHS2 domain inserted in FTSA APJL_RS00120 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase APJL_RS00125 PF02463 RecF/RecN/SMC N terminal domain APJL_RS00130 PF00005 ABC transporter APJL_RS00130 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APJL_RS00135 PF00528 Binding-protein-dependent transport system inner membrane component APJL_RS00135 PF12911 N-terminal TM domain of oligopeptide transport permease C APJL_RS00140 PF00528 Binding-protein-dependent transport system inner membrane component APJL_RS00145 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APJL_RS00150 PF03144 Elongation factor Tu domain 2 APJL_RS00150 PF00009 Elongation factor Tu GTP binding domain APJL_RS00150 PF16658 Class II release factor RF3, C-terminal domain APJL_RS00165 PF01195 Peptidyl-tRNA hydrolase APJL_RS00170 PF01926 50S ribosome-binding GTPase APJL_RS00170 PF06071 Protein of unknown function (DUF933) APJL_RS00185 PF05433 Glycine zipper 2TM domain APJL_RS00190 PF06185 YecM protein APJL_RS00195 PF03485 Arginyl tRNA synthetase N terminal domain APJL_RS00195 PF00750 tRNA synthetases class I (R) APJL_RS00195 PF05746 DALR anticodon binding domain APJL_RS00200 PF01018 GTP1/OBG APJL_RS00200 PF01926 50S ribosome-binding GTPase APJL_RS00205 PF10786 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) APJL_RS00210 PF00588 SpoU rRNA Methylase family APJL_RS00210 PF08032 RNA 2'-O ribose methyltransferase substrate binding APJL_RS00215 PF13091 PLD-like domain APJL_RS00220 PF08264 Anticodon-binding domain of tRNA APJL_RS00220 PF00133 tRNA synthetases class I (I, L, M and V) APJL_RS00220 PF06827 Zinc finger found in FPG and IleRS APJL_RS00225 PF01687 Riboflavin kinase APJL_RS00225 PF06574 FAD synthetase APJL_RS00230 PF13521 AAA domain APJL_RS00230 PF01467 Cytidylyltransferase-like APJL_RS00235 PF00149 Calcineurin-like phosphoesterase APJL_RS00240 PF00072 Response regulator receiver domain APJL_RS00240 PF00486 Transcriptional regulatory protein, C terminal APJL_RS00255 PF01168 Alanine racemase, N-terminal domain APJL_RS00260 PF00679 Elongation factor G C-terminus APJL_RS00260 PF00009 Elongation factor Tu GTP binding domain APJL_RS00260 PF03144 Elongation factor Tu domain 2 APJL_RS00265 PF00462 Glutaredoxin APJL_RS00270 PF03725 3' exoribonuclease family, domain 2 APJL_RS00270 PF01138 3' exoribonuclease family, domain 1 APJL_RS00275 PF08340 Domain of unknown function (DUF1732) APJL_RS00275 PF03755 YicC-like family, N-terminal region APJL_RS00280 PF01571 Aminomethyltransferase folate-binding domain APJL_RS00285 PF00037 4Fe-4S binding domain APJL_RS00290 PF00196 Bacterial regulatory proteins, luxR family APJL_RS00290 PF00072 Response regulator receiver domain APJL_RS00295 PF01170 Putative RNA methylase family UPF0020 APJL_RS00295 PF02926 THUMP domain APJL_RS00295 PF10672 S-adenosylmethionine-dependent methyltransferase APJL_RS00300 PF00588 SpoU rRNA Methylase family APJL_RS00305 PF00923 Transaldolase/Fructose-6-phosphate aldolase APJL_RS00335 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APJL_RS00340 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APJL_RS00345 PF00528 Binding-protein-dependent transport system inner membrane component APJL_RS00350 PF00528 Binding-protein-dependent transport system inner membrane component APJL_RS00350 PF12911 N-terminal TM domain of oligopeptide transport permease C APJL_RS00355 PF00005 ABC transporter APJL_RS00355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APJL_RS00360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APJL_RS00360 PF00005 ABC transporter APJL_RS00365 PF06146 Phosphate-starvation-inducible E APJL_RS00375 PF01042 Endoribonuclease L-PSP APJL_RS00380 PF01063 Amino-transferase class IV APJL_RS00385 PF00462 Glutaredoxin APJL_RS00390 PF02132 RecR protein APJL_RS00390 PF13662 Toprim domain APJL_RS00395 PF02575 YbaB/EbfC DNA-binding family APJL_RS00400 PF03544 Gram-negative bacterial TonB protein C-terminal APJL_RS00405 PF02472 Biopolymer transport protein ExbD/TolR APJL_RS00410 PF01618 MotA/TolQ/ExbB proton channel family APJL_RS00415 PF00581 Rhodanese-like domain APJL_RS00425 PF00381 PTS HPr component phosphorylation site APJL_RS00425 PF00391 PEP-utilising enzyme, mobile domain APJL_RS00425 PF05524 PEP-utilising enzyme, N-terminal APJL_RS00425 PF03610 PTS system fructose IIA component APJL_RS00430 PF02734 DAK2 domain APJL_RS00435 PF02733 Dak1 domain APJL_RS00440 PF07992 Pyridine nucleotide-disulphide oxidoreductase APJL_RS00445 PF02348 Cytidylyltransferase APJL_RS00450 PF06078 Bacterial protein of unknown function (DUF937) APJL_RS00455 PF09297 NADH pyrophosphatase zinc ribbon domain APJL_RS00455 PF00293 NUDIX domain APJL_RS00460 PF00849 RNA pseudouridylate synthase APJL_RS00470 PF04186 FxsA cytoplasmic membrane protein APJL_RS00475 PF00557 Metallopeptidase family M24 APJL_RS00480 PF01206 Sulfurtransferase TusA APJL_RS00485 PF06877 Regulator of ribonuclease activity B APJL_RS00490 PF01926 50S ribosome-binding GTPase APJL_RS00500 PF02535 ZIP Zinc transporter APJL_RS00505 PF00920 Dehydratase family APJL_RS00515 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain APJL_RS00515 PF00205 Thiamine pyrophosphate enzyme, central domain APJL_RS00515 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain APJL_RS00520 PF02335 Cytochrome c552 APJL_RS00530 PF13247 4Fe-4S dicluster domain APJL_RS00535 PF03916 Polysulphide reductase, NrfD APJL_RS00540 PF05658 Head domain of trimeric autotransporter adhesin APJL_RS00540 PF05662 Coiled stalk of trimeric autotransporter adhesin APJL_RS00540 PF03895 YadA-like membrane anchor domain APJL_RS00550 PF00860 Permease family APJL_RS00555 PF00171 Aldehyde dehydrogenase family APJL_RS00555 PF01619 Proline dehydrogenase APJL_RS00555 PF14850 DNA-binding domain of Proline dehydrogenase APJL_RS00555 PF18327 Proline utilization A proline dehydrogenase N-terminal domain APJL_RS00560 PF00474 Sodium:solute symporter family APJL_RS00565 PF01614 Bacterial transcriptional regulator APJL_RS00565 PF09339 IclR helix-turn-helix domain APJL_RS00570 PF01812 5-formyltetrahydrofolate cyclo-ligase family APJL_RS00575 PF05164 Cell division protein ZapA APJL_RS00580 PF03695 Uncharacterised protein family (UPF0149) APJL_RS00585 PF01208 Uroporphyrinogen decarboxylase (URO-D) APJL_RS00590 PF04222 Protein of unknown function (DUF416) APJL_RS00595 PF00216 Bacterial DNA-binding protein APJL_RS00600 PF00303 Thymidylate synthase APJL_RS00610 PF06968 Biotin and Thiamin Synthesis associated domain APJL_RS00610 PF04055 Radical SAM superfamily APJL_RS00615 PF00313 'Cold-shock' DNA-binding domain APJL_RS00620 PF04352 ProQ/FINO family APJL_RS00625 PF00595 PDZ domain APJL_RS00625 PF03572 Peptidase family S41 APJL_RS00625 PF17804 Tail specific protease N-terminal domain APJL_RS00625 PF11818 C-terminal domain of tail specific protease (DUF3340) APJL_RS00630 PF03734 L,D-transpeptidase catalytic domain APJL_RS00635 PF05951 Bacterial protein of unknown function (DUF882) APJL_RS00640 PF00753 Metallo-beta-lactamase superfamily APJL_RS00655 PF01230 HIT domain APJL_RS00660 PF00950 ABC 3 transport family APJL_RS00665 PF00950 ABC 3 transport family APJL_RS00670 PF01351 Ribonuclease HII APJL_RS00675 PF03193 RsgA GTPase APJL_RS00680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APJL_RS00680 PF03466 LysR substrate binding domain APJL_RS00685 PF13419 Haloacid dehalogenase-like hydrolase APJL_RS00690 PF03466 LysR substrate binding domain APJL_RS00690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APJL_RS00700 PF00710 Asparaginase, N-terminal APJL_RS00700 PF17763 Glutaminase/Asparaginase C-terminal domain APJL_RS00705 PF00117 Glutamine amidotransferase class-I APJL_RS00705 PF06418 CTP synthase N-terminus APJL_RS00710 PF10063 Uncharacterized integral membrane protein (DUF2301) APJL_RS00715 PF00694 Aconitase C-terminal domain APJL_RS00720 PF00330 Aconitase family (aconitate hydratase) APJL_RS00725 PF17853 GGDEF-like domain APJL_RS00725 PF13556 PucR C-terminal helix-turn-helix domain APJL_RS00725 PF05651 Putative sugar diacid recognition APJL_RS00730 PF02447 GntP family permease APJL_RS00735 PF02595 Glycerate kinase family APJL_RS00740 PF00708 Acylphosphatase APJL_RS00745 PF11398 Protein of unknown function (DUF2813) APJL_RS00750 PF11892 Domain of unknown function (DUF3412) APJL_RS00750 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases APJL_RS00750 PF03641 Possible lysine decarboxylase APJL_RS00755 PF01207 Dihydrouridine synthase (Dus) APJL_RS00765 PF02867 Ribonucleotide reductase, barrel domain APJL_RS00765 PF00317 Ribonucleotide reductase, all-alpha domain APJL_RS00765 PF03477 ATP cone domain APJL_RS00770 PF01106 NifU-like domain APJL_RS00770 PF01521 Iron-sulphur cluster biosynthesis APJL_RS00775 PF11973 NQRA C-terminal domain APJL_RS00775 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) APJL_RS00780 PF03116 NQR2, RnfD, RnfE family APJL_RS00785 PF04205 FMN-binding domain APJL_RS00790 PF02508 Rnf-Nqr subunit, membrane protein APJL_RS00795 PF02508 Rnf-Nqr subunit, membrane protein APJL_RS00800 PF00175 Oxidoreductase NAD-binding domain APJL_RS00800 PF00111 2Fe-2S iron-sulfur cluster binding domain APJL_RS00800 PF00970 Oxidoreductase FAD-binding domain APJL_RS00805 PF02424 ApbE family APJL_RS00810 PF04400 (Na+)-NQR maturation NqrM APJL_RS00820 PF12832 MFS_1 like family APJL_RS00825 PF03807 NADP oxidoreductase coenzyme F420-dependent APJL_RS00825 PF14748 Pyrroline-5-carboxylate reductase dimerisation APJL_RS00830 PF04381 Putative exonuclease, RdgC APJL_RS00835 PF13419 Haloacid dehalogenase-like hydrolase APJL_RS00850 PF02508 Rnf-Nqr subunit, membrane protein APJL_RS00855 PF04060 Putative Fe-S cluster APJL_RS00860 PF13375 RnfC Barrel sandwich hybrid domain APJL_RS00860 PF12838 4Fe-4S dicluster domain APJL_RS00860 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit APJL_RS00865 PF03458 UPF0126 domain APJL_RS00870 PF03116 NQR2, RnfD, RnfE family APJL_RS00875 PF04205 FMN-binding domain APJL_RS00880 PF02508 Rnf-Nqr subunit, membrane protein APJL_RS00885 PF03279 Bacterial lipid A biosynthesis acyltransferase APJL_RS00900 PF01258 Prokaryotic dksA/traR C4-type zinc finger APJL_RS00905 PF01743 Poly A polymerase head domain APJL_RS00905 PF12626 Polymerase A arginine-rich C-terminus APJL_RS00905 PF12627 Probable RNA and SrmB- binding site of polymerase A APJL_RS00910 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) APJL_RS00920 PF11739 Dicarboxylate transport APJL_RS00930 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily APJL_RS00935 PF00929 Exonuclease APJL_RS00945 PF01817 Chorismate mutase type II APJL_RS00945 PF02153 Prephenate dehydrogenase APJL_RS00950 PF00793 DAHP synthetase I family APJL_RS00955 PF01075 Glycosyltransferase family 9 (heptosyltransferase) APJL_RS00960 PF02887 Pyruvate kinase, alpha/beta domain APJL_RS00960 PF00224 Pyruvate kinase, barrel domain APJL_RS00965 PF00300 Histidine phosphatase superfamily (branch 1) APJL_RS00970 PF01207 Dihydrouridine synthase (Dus) APJL_RS00975 PF02954 Bacterial regulatory protein, Fis family APJL_RS00980 PF00209 Sodium:neurotransmitter symporter family APJL_RS00985 PF02086 D12 class N6 adenine-specific DNA methyltransferase APJL_RS00990 PF01761 3-dehydroquinate synthase APJL_RS00995 PF01202 Shikimate kinase APJL_RS01000 PF17092 Penicillin-binding protein OB-like domain APJL_RS01000 PF00912 Transglycosylase APJL_RS01000 PF00905 Penicillin binding protein transpeptidase domain APJL_RS01005 PF11104 Type IV pilus assembly protein PilM; APJL_RS01025 PF03958 Bacterial type II/III secretion system short domain APJL_RS01025 PF00263 Bacterial type II and III secretion system protein APJL_RS01030 PF01029 NusB family APJL_RS01035 PF00586 AIR synthase related protein, N-terminal domain APJL_RS01035 PF02769 AIR synthase related protein, C-terminal domain APJL_RS01040 PF04608 Phosphatidylglycerophosphatase A APJL_RS01045 PF01810 LysE type translocator APJL_RS01050 PF08032 RNA 2'-O ribose methyltransferase substrate binding APJL_RS01050 PF00588 SpoU rRNA Methylase family APJL_RS01055 PF00459 Inositol monophosphatase family APJL_RS01060 PF02779 Transketolase, pyrimidine binding domain APJL_RS01060 PF13292 1-deoxy-D-xylulose-5-phosphate synthase APJL_RS01060 PF02780 Transketolase, C-terminal domain APJL_RS01065 PF00665 Integrase core domain APJL_RS01065 PF13333 Integrase core domain APJL_RS01080 PF00464 Serine hydroxymethyltransferase APJL_RS01085 PF01513 ATP-NAD kinase APJL_RS01090 PF18019 HD domain APJL_RS01095 PF01867 CRISPR associated protein Cas1 APJL_RS01105 PF09615 CRISPR-associated protein (Cas_Csy3) APJL_RS01110 PF09614 CRISPR-associated protein (Cas_Csy2) APJL_RS01120 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) APJL_RS01120 PF02824 TGS domain APJL_RS01120 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain APJL_RS01120 PF03129 Anticodon binding domain APJL_RS01125 PF03783 Curli production assembly/transport component CsgG APJL_RS01135 PF05643 Putative bacterial lipoprotein (DUF799) APJL_RS01140 PF00707 Translation initiation factor IF-3, C-terminal domain APJL_RS01140 PF05198 Translation initiation factor IF-3, N-terminal domain APJL_RS01145 PF01632 Ribosomal protein L35 APJL_RS01150 PF00453 Ribosomal protein L20 APJL_RS01170 PF13276 HTH-like domain APJL_RS01170 PF13333 Integrase core domain APJL_RS01170 PF00665 Integrase core domain APJL_RS01175 PF00665 Integrase core domain APJL_RS01175 PF13333 Integrase core domain APJL_RS01180 PF00571 CBS domain APJL_RS01180 PF01595 Cyclin M transmembrane N-terminal domain APJL_RS01180 PF03471 Transporter associated domain APJL_RS01185 PF00849 RNA pseudouridylate synthase APJL_RS01190 PF00300 Histidine phosphatase superfamily (branch 1) APJL_RS01195 PF03652 Holliday junction resolvase APJL_RS01200 PF02622 Uncharacterized ACR, COG1678 APJL_RS01205 PF04452 RNA methyltransferase APJL_RS01215 PF01722 BolA-like protein APJL_RS01240 PF02810 SEC-C motif APJL_RS01240 PF07516 SecA Wing and Scaffold domain APJL_RS01240 PF01043 SecA preprotein cross-linking domain APJL_RS01240 PF07517 SecA DEAD-like domain APJL_RS01250 PF00293 NUDIX domain APJL_RS01255 PF01118 Semialdehyde dehydrogenase, NAD binding domain APJL_RS01260 PF00696 Amino acid kinase family APJL_RS01265 PF00202 Aminotransferase class-III APJL_RS01270 PF17483 C-lobe handle domain of Tf-binding protein B APJL_RS01270 PF01298 C-lobe and N-lobe beta barrels of Tf-binding protein B APJL_RS01270 PF17484 N-Lobe handle Tf-binding protein B APJL_RS01275 PF07715 TonB-dependent Receptor Plug Domain APJL_RS01275 PF00593 TonB dependent receptor APJL_RS01280 PF07715 TonB-dependent Receptor Plug Domain APJL_RS01280 PF00593 TonB dependent receptor APJL_RS01285 PF07498 Rho termination factor, N-terminal domain APJL_RS01285 PF07497 Rho termination factor, RNA-binding domain APJL_RS01285 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain APJL_RS01290 PF00291 Pyridoxal-phosphate dependent enzyme APJL_RS01295 PF00288 GHMP kinases N terminal domain APJL_RS01295 PF08544 GHMP kinases C terminal APJL_RS01305 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain APJL_RS01305 PF02777 Iron/manganese superoxide dismutases, C-terminal domain APJL_RS01310 PF00842 Alanine racemase, C-terminal domain APJL_RS01310 PF01168 Alanine racemase, N-terminal domain APJL_RS01315 PF13538 UvrD-like helicase C-terminal domain APJL_RS01345 PF01546 Peptidase family M20/M25/M40 APJL_RS01345 PF07687 Peptidase dimerisation domain APJL_RS01350 PF00156 Phosphoribosyl transferase domain APJL_RS01355 PF00625 Guanylate kinase APJL_RS01360 PF02321 Outer membrane efflux protein APJL_RS01365 PF03658 RnfH family Ubiquitin APJL_RS01370 PF03364 Polyketide cyclase / dehydrase and lipid transport APJL_RS01375 PF00005 ABC transporter APJL_RS01375 PF03459 TOBE domain APJL_RS01380 PF00528 Binding-protein-dependent transport system inner membrane component APJL_RS01390 PF01061 ABC-2 type transporter APJL_RS01395 PF00005 ABC transporter APJL_RS01400 PF12169 DNA polymerase III subunits gamma and tau domain III APJL_RS01400 PF12170 DNA polymerase III tau subunit V interacting with alpha APJL_RS01405 PF00156 Phosphoribosyl transferase domain APJL_RS01420 PF00291 Pyridoxal-phosphate dependent enzyme APJL_RS01425 PF04073 Aminoacyl-tRNA editing domain APJL_RS01430 PF00005 ABC transporter APJL_RS01440 PF04358 DsrC like protein APJL_RS01445 PF01027 Inhibitor of apoptosis-promoting Bax1 APJL_RS01450 PF01066 CDP-alcohol phosphatidyltransferase APJL_RS01460 PF01541 GIY-YIG catalytic domain APJL_RS01460 PF08459 UvrC Helix-hairpin-helix N-terminal APJL_RS01460 PF02151 UvrB/uvrC motif APJL_RS01465 PF01026 TatD related DNase APJL_RS01470 PF13361 UvrD-like helicase C-terminal domain APJL_RS01470 PF00580 UvrD/REP helicase N-terminal domain APJL_RS01475 PF00005 ABC transporter APJL_RS01475 PF08402 TOBE domain APJL_RS01480 PF00528 Binding-protein-dependent transport system inner membrane component APJL_RS01485 PF00528 Binding-protein-dependent transport system inner membrane component APJL_RS01495 PF17864 RuvB AAA lid domain APJL_RS01495 PF05496 Holliday junction DNA helicase RuvB P-loop domain APJL_RS01495 PF05491 RuvB C-terminal winged helix domain APJL_RS01505 PF03989 DNA gyrase C-terminal domain, beta-propeller APJL_RS01505 PF00521 DNA gyrase/topoisomerase IV, subunit A APJL_RS01510 PF12161 HsdM N-terminal domain APJL_RS01510 PF02384 N-6 DNA Methylase APJL_RS01525 PF01420 Type I restriction modification DNA specificity domain APJL_RS01535 PF18766 SWI2/SNF2 ATPase APJL_RS01535 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) APJL_RS01535 PF12008 Type I restriction and modification enzyme - subunit R C terminal APJL_RS01540 PF12848 ABC transporter APJL_RS01540 PF16326 ABC transporter C-terminal domain APJL_RS01540 PF00005 ABC transporter APJL_RS01545 PF00899 ThiF family APJL_RS01550 PF17274 Family of unknown function (DUF5339) APJL_RS01555 PF01654 Cytochrome bd terminal oxidase subunit I APJL_RS01560 PF02322 Cytochrome bd terminal oxidase subunit II APJL_RS01570 PF03061 Thioesterase superfamily APJL_RS01575 PF01618 MotA/TolQ/ExbB proton channel family APJL_RS01580 PF02472 Biopolymer transport protein ExbD/TolR APJL_RS01585 PF06519 TolA C-terminal APJL_RS01585 PF06519 TolA C-terminal APJL_RS01590 PF07676 WD40-like Beta Propeller Repeat APJL_RS01590 PF04052 TolB amino-terminal domain APJL_RS01595 PF00691 OmpA family APJL_RS01605 PF00226 DnaJ domain APJL_RS01605 PF05099 Tellurite resistance protein TerB APJL_RS01610 PF01207 Dihydrouridine synthase (Dus) APJL_RS01615 PF05128 Domain of unknown function (DUF697) APJL_RS01620 PF00005 ABC transporter APJL_RS01620 PF12848 ABC transporter APJL_RS01635 PF00899 ThiF family APJL_RS01645 PF01938 TRAM domain APJL_RS01645 PF05958 tRNA (Uracil-5-)-methyltransferase APJL_RS01650 PF13286 Phosphohydrolase-associated domain APJL_RS01650 PF01966 HD domain APJL_RS01655 PF00271 Helicase conserved C-terminal domain APJL_RS01655 PF18337 RapA N-terminal Tudor like domain APJL_RS01655 PF18339 RapA N-terminal Tudor like domain 1 APJL_RS01655 PF00176 SNF2 family N-terminal domain APJL_RS01655 PF12137 RNA polymerase recycling family C-terminal APJL_RS01660 PF00849 RNA pseudouridylate synthase APJL_RS01665 PF01510 N-acetylmuramoyl-L-alanine amidase APJL_RS01670 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ APJL_RS01675 PF00156 Phosphoribosyl transferase domain APJL_RS01680 PF01717 Cobalamin-independent synthase, Catalytic domain APJL_RS01685 PF01053 Cys/Met metabolism PLP-dependent enzyme APJL_RS01690 PF02600 Disulfide bond formation protein DsbB APJL_RS01695 PF06450 Bacterial Na+/H+ antiporter B (NhaB) APJL_RS01700 PF07840 FadR C-terminal domain APJL_RS01700 PF00392 Bacterial regulatory proteins, gntR family APJL_RS01705 PF02562 PhoH-like protein APJL_RS01715 PF00472 RF-1 domain APJL_RS01715 PF03462 PCRF domain APJL_RS01720 PF00586 AIR synthase related protein, N-terminal domain APJL_RS01720 PF02769 AIR synthase related protein, C-terminal domain APJL_RS01725 PF00293 NUDIX domain APJL_RS01730 PF01494 FAD binding domain APJL_RS01750 PF01494 FAD binding domain APJL_RS01755 PF03668 P-loop ATPase protein family APJL_RS01760 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 APJL_RS01765 PF12399 Branched-chain amino acid ATP-binding cassette transporter APJL_RS01765 PF00005 ABC transporter APJL_RS01770 PF03968 OstA-like protein APJL_RS01780 PF00311 Phosphoenolpyruvate carboxylase APJL_RS01785 PF04536 TPM domain APJL_RS01795 PF04011 LemA family APJL_RS01800 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit APJL_RS01805 PF00294 pfkB family carbohydrate kinase APJL_RS01810 PF00381 PTS HPr component phosphorylation site APJL_RS01810 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 APJL_RS01815 PF00128 Alpha amylase, catalytic domain APJL_RS01815 PF02806 Alpha amylase, C-terminal all-beta domain APJL_RS01815 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) APJL_RS01820 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) APJL_RS01820 PF18390 Glycogen debranching enzyme C-terminal domain APJL_RS01820 PF00128 Alpha amylase, catalytic domain APJL_RS01825 PF00483 Nucleotidyl transferase APJL_RS01830 PF00534 Glycosyl transferases group 1 APJL_RS01830 PF08323 Starch synthase catalytic domain APJL_RS01835 PF00343 Carbohydrate phosphorylase APJL_RS01840 PF00334 Nucleoside diphosphate kinase APJL_RS01845 PF09334 tRNA synthetases class I (M) APJL_RS01845 PF08264 Anticodon-binding domain of tRNA APJL_RS01845 PF01588 Putative tRNA binding domain APJL_RS01850 PF13378 Enolase C-terminal domain-like APJL_RS01855 PF00849 RNA pseudouridylate synthase APJL_RS01855 PF01479 S4 domain APJL_RS01860 PF07690 Major Facilitator Superfamily APJL_RS01875 PF01261 Xylose isomerase-like TIM barrel APJL_RS01880 PF00877 NlpC/P60 family APJL_RS01885 PF00717 Peptidase S24-like APJL_RS01890 PF01228 Glycine radical APJL_RS01895 PF03167 Uracil DNA glycosylase superfamily APJL_RS01900 PF04393 Protein of unknown function (DUF535) APJL_RS01905 PF00082 Subtilase family APJL_RS01905 PF03797 Autotransporter beta-domain APJL_RS01910 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold APJL_RS01910 PF00270 DEAD/DEAH box helicase APJL_RS01910 PF04408 Helicase associated domain (HA2) APJL_RS01910 PF11898 Domain of unknown function (DUF3418) APJL_RS01910 PF00271 Helicase conserved C-terminal domain APJL_RS01915 PF04284 Protein of unknown function (DUF441) APJL_RS01920 PF01025 GrpE APJL_RS01925 PF13416 Bacterial extracellular solute-binding protein APJL_RS01930 PF01554 MatE APJL_RS01935 PF13361 UvrD-like helicase C-terminal domain APJL_RS01935 PF12705 PD-(D/E)XK nuclease superfamily APJL_RS01935 PF00580 UvrD/REP helicase N-terminal domain APJL_RS01940 PF00795 Carbon-nitrogen hydrolase APJL_RS01945 PF03471 Transporter associated domain APJL_RS01945 PF00571 CBS domain APJL_RS01950 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) APJL_RS01955 PF00230 Major intrinsic protein APJL_RS01960 PF02782 FGGY family of carbohydrate kinases, C-terminal domain APJL_RS01960 PF00370 FGGY family of carbohydrate kinases, N-terminal domain APJL_RS01965 PF05362 Lon protease (S16) C-terminal proteolytic domain APJL_RS01965 PF00004 ATPase family associated with various cellular activities (AAA) APJL_RS01965 PF02190 ATP-dependent protease La (LON) substrate-binding domain APJL_RS01980 PF01266 FAD dependent oxidoreductase APJL_RS01980 PF04324 BFD-like [2Fe-2S] binding domain APJL_RS01985 PF00890 FAD binding domain APJL_RS01990 PF13183 4Fe-4S dicluster domain APJL_RS01990 PF02754 Cysteine-rich domain APJL_RS01995 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region APJL_RS01995 PF01872 RibD C-terminal domain APJL_RS02000 PF00677 Lumazine binding domain APJL_RS02005 PF00925 GTP cyclohydrolase II APJL_RS02005 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase APJL_RS02010 PF00885 6,7-dimethyl-8-ribityllumazine synthase APJL_RS02020 PF03449 Transcription elongation factor, N-terminal APJL_RS02020 PF01272 Transcription elongation factor, GreA/GreB, C-term APJL_RS02025 PF00571 CBS domain APJL_RS02025 PF01380 SIS domain APJL_RS02030 PF00883 Cytosol aminopeptidase family, catalytic domain APJL_RS02030 PF12404 Peptidase APJL_RS02035 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) APJL_RS02040 PF01758 Sodium Bile acid symporter family APJL_RS02045 PF13533 Biotin-lipoyl like APJL_RS02055 PF00682 HMGL-like APJL_RS02055 PF08502 LeuA allosteric (dimerisation) domain APJL_RS02060 PF04542 Sigma-70 region 2 APJL_RS02060 PF08281 Sigma-70, region 4 APJL_RS02065 PF03872 Anti sigma-E protein RseA, N-terminal domain APJL_RS02065 PF03873 Anti sigma-E protein RseA, C-terminal domain APJL_RS02075 PF00501 AMP-binding enzyme APJL_RS02075 PF13193 AMP-binding enzyme C-terminal domain APJL_RS02085 PF00398 Ribosomal RNA adenine dimethylase APJL_RS02090 PF00639 PPIC-type PPIASE domain APJL_RS02090 PF09312 SurA N-terminal domain APJL_RS02095 PF00156 Phosphoribosyl transferase domain APJL_RS02100 PF00294 pfkB family carbohydrate kinase APJL_RS02100 PF01467 Cytidylyltransferase-like APJL_RS02105 PF01926 50S ribosome-binding GTPase APJL_RS02105 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal APJL_RS02110 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain APJL_RS02110 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain APJL_RS02110 PF01488 Shikimate / quinate 5-dehydrogenase APJL_RS02120 PF13288 DXP reductoisomerase C-terminal domain APJL_RS02120 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase APJL_RS02120 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain APJL_RS02135 PF07977 FabA-like domain APJL_RS02140 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD APJL_RS02140 PF00132 Bacterial transferase hexapeptide (six repeats) APJL_RS02150 PF01103 Surface antigen APJL_RS02150 PF07244 Surface antigen variable number repeat APJL_RS02155 PF02163 Peptidase family M50 APJL_RS02165 PF01255 Putative undecaprenyl diphosphate synthase APJL_RS02170 PF16123 Hydroxyacylglutathione hydrolase C-terminus APJL_RS02170 PF00753 Metallo-beta-lactamase superfamily APJL_RS02175 PF00480 ROK family APJL_RS02180 PF01569 PAP2 superfamily APJL_RS02185 PF01985 CRS1 / YhbY (CRM) domain APJL_RS02190 PF00535 Glycosyl transferase family 2 APJL_RS02200 PF01075 Glycosyltransferase family 9 (heptosyltransferase) APJL_RS02205 PF00764 Arginosuccinate synthase APJL_RS02210 PF00075 RNase H APJL_RS02215 PF02674 Colicin V production protein APJL_RS02220 PF00156 Phosphoribosyl transferase domain APJL_RS02230 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase APJL_RS02230 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain APJL_RS02235 PF04355 SmpA / OmlA family APJL_RS02240 PF04245 37-kD nucleoid-associated bacterial protein APJL_RS02245 PF01042 Endoribonuclease L-PSP APJL_RS02250 PF02578 Multi-copper polyphenol oxidoreductase laccase APJL_RS02260 PF07119 Protein of unknown function (DUF1375) APJL_RS02265 PF00180 Isocitrate/isopropylmalate dehydrogenase APJL_RS02270 PF01641 SelR domain APJL_RS02275 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain APJL_RS02275 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain APJL_RS02285 PF04085 rod shape-determining protein MreC APJL_RS02290 PF04093 rod shape-determining protein MreD APJL_RS02295 PF12002 MgsA AAA+ ATPase C terminal APJL_RS02295 PF16193 AAA C-terminal domain APJL_RS02295 PF00004 ATPase family associated with various cellular activities (AAA) APJL_RS02300 PF00950 ABC 3 transport family APJL_RS02305 PF13230 Glutamine amidotransferases class-II APJL_RS02310 PF00561 alpha/beta hydrolase fold APJL_RS02315 PF02698 DUF218 domain APJL_RS02325 PF02589 LUD domain APJL_RS02330 PF13183 4Fe-4S dicluster domain APJL_RS02330 PF11870 Domain of unknown function (DUF3390) APJL_RS02330 PF02589 LUD domain APJL_RS02335 PF02754 Cysteine-rich domain APJL_RS02340 PF02652 L-lactate permease APJL_RS02345 PF00816 H-NS histone family APJL_RS02350 PF03553 Na+/H+ antiporter family APJL_RS02355 PF13407 Periplasmic binding protein domain APJL_RS02360 PF02629 CoA binding domain APJL_RS02360 PF00549 CoA-ligase APJL_RS02365 PF08442 ATP-grasp domain APJL_RS02365 PF00549 CoA-ligase APJL_RS02370 PF04393 Protein of unknown function (DUF535) APJL_RS02375 PF02817 e3 binding domain APJL_RS02375 PF00364 Biotin-requiring enzyme APJL_RS02375 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) APJL_RS02380 PF00676 Dehydrogenase E1 component APJL_RS02380 PF16078 2-oxoglutarate dehydrogenase N-terminus APJL_RS02380 PF02779 Transketolase, pyrimidine binding domain APJL_RS02380 PF16870 2-oxoglutarate dehydrogenase C-terminal APJL_RS02385 PF00005 ABC transporter APJL_RS02390 PF04225 Opacity-associated protein A LysM-like domain APJL_RS02390 PF01551 Peptidase family M23 APJL_RS02395 PF10411 Disulfide bond isomerase protein N-terminus APJL_RS02395 PF13098 Thioredoxin-like domain APJL_RS02400 PF17768 RecJ OB domain APJL_RS02400 PF02272 DHHA1 domain APJL_RS02400 PF01368 DHH family APJL_RS02405 PF01389 OmpA-like transmembrane domain APJL_RS02405 PF00691 OmpA family APJL_RS02415 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term APJL_RS02415 PF07730 Histidine kinase APJL_RS02415 PF00672 HAMP domain APJL_RS02415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APJL_RS02425 PF01725 Ham1 family APJL_RS02430 PF01906 Putative heavy-metal-binding APJL_RS02435 PF01268 Formate--tetrahydrofolate ligase APJL_RS02440 PF03692 Putative zinc- or iron-chelating domain APJL_RS02445 PF00106 short chain dehydrogenase APJL_RS02450 PF00291 Pyridoxal-phosphate dependent enzyme APJL_RS02455 PF00290 Tryptophan synthase alpha chain APJL_RS02460 PF12441 CopG antitoxin of type II toxin-antitoxin system APJL_RS02470 PF00476 DNA polymerase family A APJL_RS02470 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain APJL_RS02470 PF01367 5'-3' exonuclease, C-terminal SAM fold APJL_RS02470 PF01612 3'-5' exonuclease APJL_RS02480 PF03548 Outer membrane lipoprotein carrier protein LolA APJL_RS02485 PF01371 Trp repressor protein APJL_RS02490 PF00912 Transglycosylase APJL_RS02495 PF02627 Carboxymuconolactone decarboxylase family APJL_RS02525 PF00881 Nitroreductase family APJL_RS02530 PF08443 RimK-like ATP-grasp domain APJL_RS02530 PF18030 RimK PreATP-grasp domain APJL_RS02535 PF02698 DUF218 domain APJL_RS02545 PF01386 Ribosomal L25p family APJL_RS02550 PF06226 Protein of unknown function (DUF1007) APJL_RS02555 PF03824 High-affinity nickel-transport protein APJL_RS02560 PF01235 Sodium:alanine symporter family APJL_RS02570 PF00005 ABC transporter APJL_RS02580 PF02597 ThiS family APJL_RS02590 PF06968 Biotin and Thiamin Synthesis associated domain APJL_RS02590 PF04055 Radical SAM superfamily APJL_RS02595 PF03070 TENA/THI-4/PQQC family APJL_RS02605 PF08543 Phosphomethylpyrimidine kinase APJL_RS02615 PF00009 Elongation factor Tu GTP binding domain APJL_RS02615 PF06421 GTP-binding protein LepA C-terminus APJL_RS02615 PF03144 Elongation factor Tu domain 2 APJL_RS02615 PF00679 Elongation factor G C-terminus APJL_RS02620 PF10502 Signal peptidase, peptidase S26 APJL_RS02625 PF00035 Double-stranded RNA binding motif APJL_RS02625 PF14622 Ribonuclease-III-like APJL_RS02630 PF07650 KH domain APJL_RS02630 PF01926 50S ribosome-binding GTPase APJL_RS02635 PF11967 Recombination protein O N terminal APJL_RS02635 PF02565 Recombination protein O C terminal APJL_RS02670 PF00437 Type II/IV secretion system protein APJL_RS02685 PF03958 Bacterial type II/III secretion system short domain APJL_RS02685 PF00263 Bacterial type II and III secretion system protein APJL_RS02695 PF05872 Bacterial protein of unknown function (DUF853) APJL_RS02705 PF00528 Binding-protein-dependent transport system inner membrane component APJL_RS02720 PF06472 ABC transporter transmembrane region 2 APJL_RS02720 PF00005 ABC transporter APJL_RS02725 PF00318 Ribosomal protein S2 APJL_RS02730 PF00889 Elongation factor TS APJL_RS02735 PF00884 Sulfatase APJL_RS02740 PF00696 Amino acid kinase family APJL_RS02745 PF01765 Ribosome recycling factor APJL_RS02750 PF00392 Bacterial regulatory proteins, gntR family APJL_RS02750 PF00155 Aminotransferase class I and II APJL_RS02755 PF01680 SOR/SNZ family APJL_RS02760 PF01174 SNO glutamine amidotransferase family APJL_RS02765 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region APJL_RS02770 PF00271 Helicase conserved C-terminal domain APJL_RS02770 PF00270 DEAD/DEAH box helicase APJL_RS02770 PF03880 DbpA RNA binding domain APJL_RS02780 PF01138 3' exoribonuclease family, domain 1 APJL_RS02780 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain APJL_RS02780 PF00575 S1 RNA binding domain APJL_RS02780 PF00013 KH domain APJL_RS02780 PF03725 3' exoribonuclease family, domain 2 APJL_RS02785 PF03989 DNA gyrase C-terminal domain, beta-propeller APJL_RS02785 PF00521 DNA gyrase/topoisomerase IV, subunit A APJL_RS02790 PF03882 MukF winged-helix domain APJL_RS02790 PF17193 MukF C-terminal domain APJL_RS02790 PF17192 MukF middle domain APJL_RS02795 PF04288 MukE-like family APJL_RS02800 PF16330 MukB hinge domain APJL_RS02800 PF04310 MukB N-terminal APJL_RS02805 PF07690 Major Facilitator Superfamily APJL_RS02810 PF11893 Domain of unknown function (DUF3413) APJL_RS02810 PF00884 Sulfatase APJL_RS02815 PF07208 Protein of unknown function (DUF1414) APJL_RS02820 PF00440 Bacterial regulatory proteins, tetR family APJL_RS02825 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion APJL_RS02830 PF00873 AcrB/AcrD/AcrF family APJL_RS02835 PF12804 MobA-like NTP transferase domain APJL_RS02835 PF00132 Bacterial transferase hexapeptide (six repeats) APJL_RS02845 PF08942 Domain of unknown function (DUF1919) APJL_RS02850 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain APJL_RS02850 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III APJL_RS02850 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II APJL_RS02850 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I APJL_RS02855 PF02540 NAD synthase APJL_RS02855 PF00958 GMP synthase C terminal domain APJL_RS02855 PF00117 Glutamine amidotransferase class-I APJL_RS02865 PF00571 CBS domain APJL_RS02865 PF00478 IMP dehydrogenase / GMP reductase domain APJL_RS02870 PF01728 FtsJ-like methyltransferase APJL_RS02875 PF17862 AAA+ lid domain APJL_RS02875 PF06480 FtsH Extracellular APJL_RS02875 PF01434 Peptidase family M41 APJL_RS02875 PF00004 ATPase family associated with various cellular activities (AAA) APJL_RS02880 PF03222 Tryptophan/tyrosine permease family APJL_RS02885 PF03222 Tryptophan/tyrosine permease family APJL_RS02890 PF08335 GlnD PII-uridylyltransferase APJL_RS02890 PF01966 HD domain APJL_RS02895 PF06295 Protein of unknown function (DUF1043) APJL_RS02900 PF00572 Ribosomal protein L13 APJL_RS02905 PF00380 Ribosomal protein S9/S16 APJL_RS02910 PF03883 Peroxide stress protein YaaA APJL_RS02920 PF16916 Dimerisation domain of Zinc Transporter APJL_RS02920 PF01545 Cation efflux family APJL_RS02925 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) APJL_RS02930 PF00375 Sodium:dicarboxylate symporter family APJL_RS02935 PF00881 Nitroreductase family APJL_RS02940 PF01409 tRNA synthetases class II core domain (F) APJL_RS02940 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain APJL_RS02945 PF03484 tRNA synthetase B5 domain APJL_RS02945 PF01588 Putative tRNA binding domain APJL_RS02945 PF03147 Ferredoxin-fold anticodon binding domain APJL_RS02945 PF03483 B3/4 domain APJL_RS02945 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain APJL_RS02950 PF00216 Bacterial DNA-binding protein APJL_RS02955 PF00877 NlpC/P60 family APJL_RS02960 PF00665 Integrase core domain APJL_RS02960 PF13333 Integrase core domain APJL_RS02965 PF13276 HTH-like domain APJL_RS02965 PF00665 Integrase core domain APJL_RS02965 PF13333 Integrase core domain APJL_RS02980 PF00480 ROK family APJL_RS02980 PF01047 MarR family APJL_RS02985 PF01612 3'-5' exonuclease APJL_RS02985 PF00570 HRDC domain APJL_RS02990 PF01037 Lrp/AsnC ligand binding domain APJL_RS02995 PF01580 FtsK/SpoIIIE family APJL_RS02995 PF09397 Ftsk gamma domain APJL_RS02995 PF17854 FtsK alpha domain APJL_RS02995 PF13491 4TM region of DNA translocase FtsK/SpoIIIE APJL_RS03000 PF04228 Putative neutral zinc metallopeptidase APJL_RS03005 PF00793 DAHP synthetase I family APJL_RS03010 PF00814 Glycoprotease family APJL_RS03015 PF00265 Thymidine kinase APJL_RS03020 PF06005 Cell division protein ZapB APJL_RS03025 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded APJL_RS03030 PF01784 NIF3 (NGG1p interacting factor 3) APJL_RS03035 PF00005 ABC transporter APJL_RS03035 PF02687 FtsX-like permease family APJL_RS03035 PF12704 MacB-like periplasmic core domain APJL_RS03040 PF00672 HAMP domain APJL_RS03040 PF00512 His Kinase A (phospho-acceptor) domain APJL_RS03040 PF16527 Two-component sensor protein CpxA, periplasmic domain APJL_RS03040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APJL_RS03045 PF00072 Response regulator receiver domain APJL_RS03045 PF00486 Transcriptional regulatory protein, C terminal APJL_RS03050 PF03819 MazG nucleotide pyrophosphohydrolase domain APJL_RS03055 PF17848 Acetyl-coA carboxylase zinc finger domain APJL_RS03055 PF01039 Carboxyl transferase domain APJL_RS03060 PF08245 Mur ligase middle domain APJL_RS03070 PF17384 RimP C-terminal SH3 domain APJL_RS03070 PF02576 RimP N-terminal domain APJL_RS03075 PF13184 NusA-like KH domain APJL_RS03075 PF08529 NusA N-terminal domain APJL_RS03075 PF00575 S1 RNA binding domain APJL_RS03080 PF11987 Translation-initiation factor 2 APJL_RS03080 PF00009 Elongation factor Tu GTP binding domain APJL_RS03080 PF04760 Translation initiation factor IF-2, N-terminal region APJL_RS03085 PF02033 Ribosome-binding factor A APJL_RS03090 PF16198 tRNA pseudouridylate synthase B C-terminal domain APJL_RS03090 PF01509 TruB family pseudouridylate synthase (N terminal domain) APJL_RS03090 PF09157 Pseudouridine synthase II TruB, C-terminal APJL_RS03095 PF13406 Transglycosylase SLT domain APJL_RS03100 PF07411 Domain of unknown function (DUF1508) APJL_RS03105 PF01515 Phosphate acetyl/butaryl transferase APJL_RS03105 PF07085 DRTGG domain APJL_RS03110 PF00871 Acetokinase family APJL_RS03115 PF00149 Calcineurin-like phosphoesterase APJL_RS03115 PF02872 5'-nucleotidase, C-terminal domain APJL_RS03125 PF13609 Gram-negative porin APJL_RS03135 PF00483 Nucleotidyl transferase APJL_RS03140 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain APJL_RS03140 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I APJL_RS03140 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III APJL_RS03140 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II APJL_RS03145 PF02599 Global regulator protein family APJL_RS03150 PF01411 tRNA synthetases class II (A) APJL_RS03150 PF02272 DHHA1 domain APJL_RS03150 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain APJL_RS03155 PF00582 Universal stress protein family APJL_RS03160 PF00325 Bacterial regulatory proteins, crp family APJL_RS03160 PF00027 Cyclic nucleotide-binding domain APJL_RS03165 PF04386 Stringent starvation protein B APJL_RS03170 PF00043 Glutathione S-transferase, C-terminal domain APJL_RS03170 PF02798 Glutathione S-transferase, N-terminal domain APJL_RS03175 PF00731 AIR carboxylase APJL_RS03180 PF00710 Asparaginase, N-terminal APJL_RS03180 PF17763 Glutaminase/Asparaginase C-terminal domain APJL_RS03185 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain APJL_RS03185 PF02222 ATP-grasp domain APJL_RS03190 PF00155 Aminotransferase class I and II APJL_RS03195 PF05195 Aminopeptidase P, N-terminal domain APJL_RS03195 PF00557 Metallopeptidase family M24 APJL_RS03200 PF04851 Type III restriction enzyme, res subunit APJL_RS03200 PF08774 VRR-NUC domain APJL_RS03205 PF18273 Type III R-M EcoP15I C-terminal domain APJL_RS03205 PF01555 DNA methylase APJL_RS03220 PF13635 Domain of unknown function (DUF4143) APJL_RS03220 PF13173 AAA domain APJL_RS03225 PF01850 PIN domain APJL_RS03240 PF02151 UvrB/uvrC motif APJL_RS03240 PF12344 Ultra-violet resistance protein B APJL_RS03240 PF17757 UvrB interaction domain APJL_RS03240 PF04851 Type III restriction enzyme, res subunit APJL_RS03240 PF00271 Helicase conserved C-terminal domain APJL_RS03245 PF09375 Imelysin APJL_RS03250 PF04261 Dyp-type peroxidase family APJL_RS03250 PF10518 TAT (twin-arginine translocation) pathway signal sequence APJL_RS03260 PF02811 PHP domain APJL_RS03270 PF08411 Exonuclease C-terminal APJL_RS03270 PF00929 Exonuclease APJL_RS03275 PF00654 Voltage gated chloride channel APJL_RS03280 PF01336 OB-fold nucleic acid binding domain APJL_RS03280 PF00152 tRNA synthetases class II (D, K and N) APJL_RS03285 PF04055 Radical SAM superfamily APJL_RS03295 PF09285 Elongation factor P, C-terminal APJL_RS03295 PF08207 Elongation factor P (EF-P) KOW-like domain APJL_RS03295 PF01132 Elongation factor P (EF-P) OB domain APJL_RS03300 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain APJL_RS03300 PF00749 tRNA synthetases class I (E and Q), catalytic domain APJL_RS03305 PF07690 Major Facilitator Superfamily APJL_RS03310 PF01464 Transglycosylase SLT domain APJL_RS03310 PF14718 Soluble lytic murein transglycosylase L domain APJL_RS03315 PF00156 Phosphoribosyl transferase domain APJL_RS03320 PF01053 Cys/Met metabolism PLP-dependent enzyme APJL_RS03325 PF01113 Dihydrodipicolinate reductase, N-terminus APJL_RS03325 PF05173 Dihydrodipicolinate reductase, C-terminus APJL_RS03340 PF18125 RlmM ferredoxin-like domain APJL_RS03340 PF01728 FtsJ-like methyltransferase APJL_RS03345 PF04241 Protein of unknown function (DUF423) APJL_RS03350 PF09330 D-lactate dehydrogenase, membrane binding APJL_RS03350 PF01565 FAD binding domain APJL_RS03355 PF01568 Molydopterin dinucleotide binding domain APJL_RS03355 PF18364 Molybdopterin oxidoreductase N-terminal domain APJL_RS03355 PF00384 Molybdopterin oxidoreductase APJL_RS03360 PF03264 NapC/NirT cytochrome c family, N-terminal region APJL_RS03365 PF06463 Molybdenum Cofactor Synthesis C APJL_RS03365 PF04055 Radical SAM superfamily APJL_RS03370 PF01967 MoaC family APJL_RS03375 PF02597 ThiS family APJL_RS03380 PF02391 MoaE protein APJL_RS03385 PF02130 Uncharacterized protein family UPF0054 APJL_RS03390 PF13718 GNAT acetyltransferase 2 APJL_RS03390 PF05127 Helicase APJL_RS03390 PF17176 tRNA-binding domain APJL_RS03395 PF08272 Topoisomerase I zinc-ribbon-like APJL_RS03395 PF01131 DNA topoisomerase APJL_RS03395 PF01751 Toprim domain APJL_RS03395 PF01396 Topoisomerase DNA binding C4 zinc finger APJL_RS03400 PF03466 LysR substrate binding domain APJL_RS03400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APJL_RS03405 PF00583 Acetyltransferase (GNAT) family APJL_RS03405 PF00696 Amino acid kinase family APJL_RS03410 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) APJL_RS03415 PF00155 Aminotransferase class I and II APJL_RS03420 PF01053 Cys/Met metabolism PLP-dependent enzyme APJL_RS03425 PF00266 Aminotransferase class-V APJL_RS03440 PF01555 DNA methylase APJL_RS03445 PF01418 Helix-turn-helix domain, rpiR family APJL_RS03445 PF01380 SIS domain APJL_RS03450 PF04074 YhcH/YjgK/YiaL APJL_RS03455 PF02541 Ppx/GppA phosphatase family APJL_RS03460 PF04363 Protein of unknown function (DUF496) APJL_RS03470 PF03477 ATP cone domain APJL_RS03475 PF05166 YcgL domain APJL_RS03480 PF03796 DnaB-like helicase C terminal domain APJL_RS03480 PF00772 DnaB-like helicase N terminal domain APJL_RS03485 PF01497 Periplasmic binding protein APJL_RS03490 PF01032 FecCD transport family APJL_RS03495 PF01032 FecCD transport family APJL_RS03500 PF00005 ABC transporter APJL_RS03505 PF01865 Protein of unknown function DUF47 APJL_RS03510 PF01384 Phosphate transporter family APJL_RS03515 PF08239 Bacterial SH3 domain APJL_RS03525 PF01814 Hemerythrin HHE cation binding domain APJL_RS03530 PF01702 Queuine tRNA-ribosyltransferase APJL_RS03540 PF00313 'Cold-shock' DNA-binding domain APJL_RS03550 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain APJL_RS03550 PF00205 Thiamine pyrophosphate enzyme, central domain APJL_RS03550 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain APJL_RS03555 PF10369 Small subunit of acetolactate synthase APJL_RS03560 PF01523 Putative modulator of DNA gyrase APJL_RS03565 PF04751 Protein of unknown function (DUF615) APJL_RS03570 PF04247 Invasion gene expression up-regulator, SirB APJL_RS03575 PF02441 Flavoprotein APJL_RS03580 PF04474 Protein of unknown function (DUF554) APJL_RS03590 PF01253 Translation initiation factor SUI1 APJL_RS03595 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family APJL_RS03600 PF18073 Rubredoxin metal binding domain APJL_RS03605 PF06305 Lipopolysaccharide assembly protein A domain APJL_RS03610 PF00216 Bacterial DNA-binding protein APJL_RS03615 PF00575 S1 RNA binding domain APJL_RS03620 PF02224 Cytidylate kinase APJL_RS03635 PF03840 Preprotein translocase SecG subunit APJL_RS03640 PF01751 Toprim domain APJL_RS03640 PF01131 DNA topoisomerase APJL_RS03645 PF00245 Alkaline phosphatase APJL_RS03650 PF03411 Penicillin-insensitive murein endopeptidase APJL_RS03655 PF01264 Chorismate synthase APJL_RS03660 PF00924 Mechanosensitive ion channel APJL_RS03660 PF12795 Mechanosensitive ion channel porin domain APJL_RS03660 PF12794 Mechanosensitive ion channel inner membrane domain 1 APJL_RS03665 PF12794 Mechanosensitive ion channel inner membrane domain 1 APJL_RS03665 PF00924 Mechanosensitive ion channel APJL_RS03665 PF12795 Mechanosensitive ion channel porin domain APJL_RS03670 PF00501 AMP-binding enzyme APJL_RS03675 PF03925 SeqA protein C-terminal domain APJL_RS03675 PF17206 SeqA protein N-terminal domain APJL_RS03680 PF00561 alpha/beta hydrolase fold APJL_RS03685 PF13649 Methyltransferase domain APJL_RS03705 PF00773 RNB domain APJL_RS03705 PF00575 S1 RNA binding domain APJL_RS03705 PF08206 Ribonuclease B OB domain APJL_RS03710 PF03788 LrgA family APJL_RS03715 PF04172 LrgB-like family APJL_RS03720 PF00149 Calcineurin-like phosphoesterase APJL_RS03730 PF03889 Alternative ribosome-rescue factor A APJL_RS03735 PF13649 Methyltransferase domain APJL_RS03740 PF01594 AI-2E family transporter APJL_RS03745 PF01933 Uncharacterised protein family UPF0052 APJL_RS03750 PF02547 Queuosine biosynthesis protein APJL_RS03755 PF13567 Domain of unknown function (DUF4131) APJL_RS03755 PF00753 Metallo-beta-lactamase superfamily APJL_RS03755 PF03772 Competence protein APJL_RS03760 PF00375 Sodium:dicarboxylate symporter family APJL_RS03770 PF01219 Prokaryotic diacylglycerol kinase APJL_RS03775 PF00149 Calcineurin-like phosphoesterase APJL_RS03775 PF02872 5'-nucleotidase, C-terminal domain APJL_RS03800 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain APJL_RS03800 PF07992 Pyridine nucleotide-disulphide oxidoreductase APJL_RS03805 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) APJL_RS03805 PF02817 e3 binding domain APJL_RS03805 PF00364 Biotin-requiring enzyme APJL_RS03810 PF17831 Pyruvate dehydrogenase E1 component middle domain APJL_RS03810 PF00456 Transketolase, thiamine diphosphate binding domain APJL_RS03815 PF01180 Dihydroorotate dehydrogenase APJL_RS03820 PF14572 Phosphoribosyl synthetase-associated domain APJL_RS03820 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase APJL_RS03825 PF00288 GHMP kinases N terminal domain APJL_RS03825 PF08544 GHMP kinases C terminal APJL_RS03830 PF03550 Outer membrane lipoprotein LolB APJL_RS03835 PF00664 ABC transporter transmembrane region APJL_RS03835 PF00005 ABC transporter APJL_RS03840 PF04172 LrgB-like family APJL_RS03850 PF13307 Helicase C-terminal domain APJL_RS03850 PF06733 DEAD_2 APJL_RS03860 PF17760 UvrA interaction domain APJL_RS03860 PF17755 UvrA DNA-binding domain APJL_RS03865 PF00436 Single-strand binding protein family APJL_RS03895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APJL_RS03895 PF03466 LysR substrate binding domain APJL_RS03900 PF03060 Nitronate monooxygenase APJL_RS03915 PF04237 YjbR APJL_RS03920 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APJL_RS03920 PF00005 ABC transporter APJL_RS03925 PF00528 Binding-protein-dependent transport system inner membrane component APJL_RS03925 PF12911 N-terminal TM domain of oligopeptide transport permease C APJL_RS03930 PF00528 Binding-protein-dependent transport system inner membrane component APJL_RS03935 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APJL_RS03940 PF18024 Helix-turn-helix domain APJL_RS03940 PF00158 Sigma-54 interaction domain APJL_RS03945 PF13580 SIS domain APJL_RS03950 PF01293 Phosphoenolpyruvate carboxykinase APJL_RS03955 PF04977 Septum formation initiator APJL_RS03960 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase APJL_RS03965 PF02542 YgbB family APJL_RS03970 PF00884 Sulfatase APJL_RS03975 PF00111 2Fe-2S iron-sulfur cluster binding domain APJL_RS03975 PF03476 MOSC N-terminal beta barrel domain APJL_RS03975 PF03473 MOSC domain APJL_RS03980 PF02609 Exonuclease VII small subunit APJL_RS03985 PF00348 Polyprenyl synthetase APJL_RS03995 PF00152 tRNA synthetases class II (D, K and N) APJL_RS03995 PF01336 OB-fold nucleic acid binding domain APJL_RS04000 PF00575 S1 RNA binding domain APJL_RS04000 PF10150 Ribonuclease E/G family APJL_RS04005 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding APJL_RS04005 PF18381 YcaO cyclodehydratase C-terminal domain APJL_RS04010 PF08774 VRR-NUC domain APJL_RS04010 PF04851 Type III restriction enzyme, res subunit APJL_RS04015 PF01555 DNA methylase APJL_RS04015 PF18273 Type III R-M EcoP15I C-terminal domain APJL_RS04020 PF08003 Protein of unknown function (DUF1698) APJL_RS04030 PF03562 MltA specific insert domain APJL_RS04030 PF06725 3D domain APJL_RS04050 PF00576 HIUase/Transthyretin family APJL_RS04055 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family APJL_RS04055 PF00356 Bacterial regulatory proteins, lacI family APJL_RS04060 PF09335 SNARE associated Golgi protein APJL_RS04065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APJL_RS04065 PF00986 DNA gyrase B subunit, carboxyl terminus APJL_RS04065 PF00204 DNA gyrase B APJL_RS04065 PF18053 DNA gyrase B subunit insert domain APJL_RS04065 PF01751 Toprim domain APJL_RS04070 PF01040 UbiA prenyltransferase family APJL_RS04075 PF00455 DeoR C terminal sensor domain APJL_RS04075 PF08220 DeoR-like helix-turn-helix domain APJL_RS04080 PF08328 Adenylosuccinate lyase C-terminal APJL_RS04080 PF00206 Lyase APJL_RS04085 PF04356 Protein of unknown function (DUF489) APJL_RS04090 PF00664 ABC transporter transmembrane region APJL_RS04090 PF00005 ABC transporter APJL_RS04095 PF00664 ABC transporter transmembrane region APJL_RS04095 PF00005 ABC transporter APJL_RS04100 PF04357 TamB, inner membrane protein subunit of TAM complex APJL_RS04105 PF01103 Surface antigen APJL_RS04105 PF17243 POTRA domain TamA domain 1 APJL_RS04110 PF04748 Divergent polysaccharide deacetylase APJL_RS04115 PF01551 Peptidase family M23 APJL_RS04120 PF00300 Histidine phosphatase superfamily (branch 1) APJL_RS04125 PF01810 LysE type translocator APJL_RS04130 PF00485 Phosphoribulokinase / Uridine kinase family APJL_RS04135 PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) APJL_RS04140 PF00440 Bacterial regulatory proteins, tetR family APJL_RS04140 PF14278 Transcriptional regulator C-terminal region APJL_RS04145 PF13533 Biotin-lipoyl like APJL_RS04150 PF00005 ABC transporter APJL_RS04160 PF02321 Outer membrane efflux protein APJL_RS04165 PF02233 NAD(P) transhydrogenase beta subunit APJL_RS04170 PF01262 Alanine dehydrogenase/PNT, C-terminal domain APJL_RS04170 PF05222 Alanine dehydrogenase/PNT, N-terminal domain APJL_RS04170 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch APJL_RS04175 PF00588 SpoU rRNA Methylase family APJL_RS04190 PF14489 QueF-like protein APJL_RS04190 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term APJL_RS04200 PF00578 AhpC/TSA family APJL_RS04210 PF04055 Radical SAM superfamily APJL_RS04210 PF06969 HemN C-terminal domain APJL_RS04215 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APJL_RS04220 PF00528 Binding-protein-dependent transport system inner membrane component APJL_RS04225 PF00005 ABC transporter APJL_RS04225 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APJL_RS04230 PF00005 ABC transporter APJL_RS04230 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APJL_RS04235 PF00890 FAD binding domain APJL_RS04235 PF02910 Fumarate reductase flavoprotein C-term APJL_RS04240 PF01717 Cobalamin-independent synthase, Catalytic domain APJL_RS04245 PF02219 Methylenetetrahydrofolate reductase APJL_RS04250 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APJL_RS04255 PF03222 Tryptophan/tyrosine permease family APJL_RS04260 PF03313 Serine dehydratase alpha chain APJL_RS04260 PF03315 Serine dehydratase beta chain APJL_RS04265 PF01266 FAD dependent oxidoreductase APJL_RS04265 PF05430 S-adenosyl-L-methionine-dependent methyltransferase APJL_RS04270 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase APJL_RS04270 PF00218 Indole-3-glycerol phosphate synthase APJL_RS04275 PF02661 Fic/DOC family APJL_RS04275 PF12728 Helix-turn-helix domain APJL_RS04280 PF04287 tRNA pseudouridine synthase C APJL_RS04285 PF00849 RNA pseudouridylate synthase APJL_RS04295 PF01928 CYTH domain APJL_RS04300 PF04317 YcjX-like family, DUF463 APJL_RS04305 PF01668 SmpB protein APJL_RS04310 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) APJL_RS04310 PF02403 Seryl-tRNA synthetase N-terminal domain APJL_RS04315 PF01546 Peptidase family M20/M25/M40 APJL_RS04315 PF07687 Peptidase dimerisation domain APJL_RS04320 PF03606 C4-dicarboxylate anaerobic carrier APJL_RS04325 PF03575 Peptidase family S51 APJL_RS04330 PF08264 Anticodon-binding domain of tRNA APJL_RS04330 PF00133 tRNA synthetases class I (I, L, M and V) APJL_RS04330 PF13603 Leucyl-tRNA synthetase, Domain 2 APJL_RS04335 PF04390 Lipopolysaccharide-assembly APJL_RS04340 PF06144 DNA polymerase III, delta subunit APJL_RS04340 PF14840 Processivity clamp loader gamma complex DNA pol III C-term APJL_RS04345 PF03884 DNA gyrase inhibitor YacG APJL_RS04350 PF01121 Dephospho-CoA kinase APJL_RS04360 PF00482 Type II secretion system (T2SS), protein F APJL_RS04365 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain APJL_RS04365 PF00437 Type II/IV secretion system protein APJL_RS04370 PF07963 Prokaryotic N-terminal methylation motif APJL_RS04375 PF18073 Rubredoxin metal binding domain APJL_RS04385 PF00186 Dihydrofolate reductase APJL_RS04390 PF00696 Amino acid kinase family APJL_RS04390 PF01472 PUA domain APJL_RS04395 PF01925 Sulfite exporter TauE/SafE APJL_RS04405 PF00108 Thiolase, N-terminal domain APJL_RS04405 PF02803 Thiolase, C-terminal domain APJL_RS04410 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain APJL_RS04410 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain APJL_RS04410 PF00378 Enoyl-CoA hydratase/isomerase APJL_RS04425 PF02634 FdhD/NarQ family APJL_RS04430 PF00384 Molybdopterin oxidoreductase APJL_RS04430 PF04879 Molybdopterin oxidoreductase Fe4S4 domain APJL_RS04430 PF01568 Molydopterin dinucleotide binding domain APJL_RS04435 PF04879 Molybdopterin oxidoreductase Fe4S4 domain APJL_RS04435 PF01568 Molydopterin dinucleotide binding domain APJL_RS04435 PF00384 Molybdopterin oxidoreductase APJL_RS04440 PF13247 4Fe-4S dicluster domain APJL_RS04440 PF09163 Formate dehydrogenase N, transmembrane APJL_RS04445 PF01292 Prokaryotic cytochrome b561 APJL_RS04450 PF04216 Protein involved in formate dehydrogenase formation APJL_RS04465 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain APJL_RS04465 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain APJL_RS04475 PF00701 Dihydrodipicolinate synthetase family APJL_RS04480 PF03279 Bacterial lipid A biosynthesis acyltransferase APJL_RS04485 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein APJL_RS04490 PF01416 tRNA pseudouridine synthase APJL_RS04495 PF01227 GTP cyclohydrolase I APJL_RS04510 PF12464 Maltose acetyltransferase APJL_RS04510 PF00132 Bacterial transferase hexapeptide (six repeats) APJL_RS04515 PF02129 X-Pro dipeptidyl-peptidase (S15 family) APJL_RS04520 PF03466 LysR substrate binding domain APJL_RS04520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APJL_RS04525 PF03180 NLPA lipoprotein APJL_RS04530 PF03180 NLPA lipoprotein APJL_RS04535 PF00528 Binding-protein-dependent transport system inner membrane component APJL_RS04540 PF09383 NIL domain APJL_RS04540 PF00005 ABC transporter APJL_RS04545 PF01406 tRNA synthetases class I (C) catalytic domain APJL_RS04545 PF09190 DALR domain APJL_RS04550 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD APJL_RS04565 PF13333 Integrase core domain APJL_RS04565 PF00665 Integrase core domain APJL_RS04570 PF07715 TonB-dependent Receptor Plug Domain APJL_RS04570 PF00593 TonB dependent receptor APJL_RS04585 PF04384 Iron-sulphur cluster assembly APJL_RS04590 PF00111 2Fe-2S iron-sulfur cluster binding domain APJL_RS04595 PF00012 Hsp70 protein APJL_RS04600 PF10946 Protein of unknown function DUF2625 APJL_RS04610 PF07743 HSCB C-terminal oligomerisation domain APJL_RS04615 PF01521 Iron-sulphur cluster biosynthesis APJL_RS04620 PF01592 NifU-like N terminal domain APJL_RS04625 PF00266 Aminotransferase class-V APJL_RS04630 PF02082 Transcriptional regulator APJL_RS04635 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) APJL_RS04640 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain APJL_RS04640 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain APJL_RS04645 PF00072 Response regulator receiver domain APJL_RS04645 PF00512 His Kinase A (phospho-acceptor) domain APJL_RS04645 PF18415 Histidine kinase receptor ArcB trans-membrane domain APJL_RS04645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APJL_RS04645 PF00989 PAS fold APJL_RS04645 PF01627 Hpt domain APJL_RS04655 PF01713 Smr domain APJL_RS04665 PF08241 Methyltransferase domain APJL_RS04670 PF04301 Protein of unknown function (DUF452) APJL_RS04675 PF00155 Aminotransferase class I and II APJL_RS04680 PF00202 Aminotransferase class-III APJL_RS04685 PF05175 Methyltransferase small domain APJL_RS04690 PF03449 Transcription elongation factor, N-terminal APJL_RS04690 PF01272 Transcription elongation factor, GreA/GreB, C-term APJL_RS04695 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family APJL_RS04725 PF06114 IrrE N-terminal-like domain APJL_RS04730 PF01381 Helix-turn-helix APJL_RS04750 PF03412 Peptidase C39 family APJL_RS04750 PF00005 ABC transporter APJL_RS04750 PF00664 ABC transporter transmembrane region APJL_RS04755 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) APJL_RS04755 PF02382 N-terminal domain in RTX protein APJL_RS04755 PF08339 RTX C-terminal domain APJL_RS04760 PF02794 RTX toxin acyltransferase family APJL_RS04765 PF05127 Helicase APJL_RS04765 PF17176 tRNA-binding domain APJL_RS04765 PF13718 GNAT acetyltransferase 2 APJL_RS04770 PF02130 Uncharacterized protein family UPF0054 APJL_RS04775 PF02142 MGS-like domain APJL_RS04775 PF01808 AICARFT/IMPCHase bienzyme APJL_RS04810 PF13018 Extended Signal Peptide of Type V secretion system APJL_RS04810 PF05860 haemagglutination activity domain APJL_RS04810 PF04829 Pre-toxin domain with VENN motif APJL_RS04810 PF13332 Hemagglutinin repeat APJL_RS04815 PF17287 POTRA domain APJL_RS04815 PF08479 POTRA domain, ShlB-type APJL_RS04815 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB APJL_RS04820 PF03968 OstA-like protein APJL_RS04820 PF04453 LPS transport system D APJL_RS04825 PF06969 HemN C-terminal domain APJL_RS04825 PF04055 Radical SAM superfamily APJL_RS04835 PF04220 Der GTPase activator (YihI) APJL_RS04840 PF02080 TrkA-C domain APJL_RS04840 PF06826 Predicted Permease Membrane Region APJL_RS04845 PF03616 Sodium/glutamate symporter APJL_RS04850 PF06062 Uncharacterised protein family (UPF0231) APJL_RS04855 PF03710 Glutamate-ammonia ligase adenylyltransferase APJL_RS04855 PF08335 GlnD PII-uridylyltransferase APJL_RS04860 PF03795 YCII-related domain APJL_RS04865 PF03061 Thioesterase superfamily APJL_RS04870 PF04279 Intracellular septation protein A APJL_RS04880 PF04217 Protein of unknown function, DUF412 APJL_RS04885 PF01171 PP-loop family APJL_RS04890 PF03553 Na+/H+ antiporter family APJL_RS04890 PF13726 Na+-H+ antiporter family APJL_RS04895 PF03372 Endonuclease/Exonuclease/phosphatase family APJL_RS04900 PF03466 LysR substrate binding domain APJL_RS04900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APJL_RS04920 PF01197 Ribosomal protein L31 APJL_RS04925 PF02780 Transketolase, C-terminal domain APJL_RS04925 PF00456 Transketolase, thiamine diphosphate binding domain APJL_RS04925 PF02779 Transketolase, pyrimidine binding domain APJL_RS04930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APJL_RS04930 PF00183 Hsp90 protein APJL_RS04935 PF06628 Catalase-related immune-responsive APJL_RS04935 PF00199 Catalase APJL_RS04945 PF13333 Integrase core domain APJL_RS04945 PF00665 Integrase core domain APJL_RS04950 PF00149 Calcineurin-like phosphoesterase APJL_RS04955 PF03477 ATP cone domain APJL_RS04955 PF02867 Ribonucleotide reductase, barrel domain APJL_RS04955 PF00317 Ribonucleotide reductase, all-alpha domain APJL_RS04960 PF00268 Ribonucleotide reductase, small chain APJL_RS04965 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain APJL_RS04965 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain APJL_RS04970 PF00288 GHMP kinases N terminal domain APJL_RS04970 PF10509 Galactokinase galactose-binding signature APJL_RS04970 PF08544 GHMP kinases C terminal APJL_RS04975 PF01263 Aldose 1-epimerase APJL_RS04980 PF00703 Glycosyl hydrolases family 2 APJL_RS04980 PF16353 Domain of unknown function(DUF4981) APJL_RS04980 PF02929 Beta galactosidase small chain APJL_RS04980 PF02837 Glycosyl hydrolases family 2, sugar binding domain APJL_RS04980 PF02836 Glycosyl hydrolases family 2, TIM barrel domain APJL_RS04995 PF10609 NUBPL iron-transfer P-loop NTPase APJL_RS05005 PF01914 MarC family integral membrane protein APJL_RS05010 PF13145 PPIC-type PPIASE domain APJL_RS05015 PF00999 Sodium/hydrogen exchanger family APJL_RS05020 PF00312 Ribosomal protein S15 APJL_RS05025 PF05661 Protein of unknown function (DUF808) APJL_RS05030 PF07219 HemY protein N-terminus APJL_RS05035 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase APJL_RS05040 PF02602 Uroporphyrinogen-III synthase HemD APJL_RS05045 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain APJL_RS05045 PF03900 Porphobilinogen deaminase, C-terminal domain APJL_RS05050 PF00171 Aldehyde dehydrogenase family APJL_RS05050 PF00465 Iron-containing alcohol dehydrogenase APJL_RS05055 PF00118 TCP-1/cpn60 chaperonin family APJL_RS05060 PF00166 Chaperonin 10 Kd subunit APJL_RS05065 PF01048 Phosphorylase superfamily APJL_RS05070 PF01791 DeoC/LacD family aldolase APJL_RS05075 PF01773 Na+ dependent nucleoside transporter N-terminus APJL_RS05075 PF07662 Na+ dependent nucleoside transporter C-terminus APJL_RS05075 PF07670 Nucleoside recognition APJL_RS05085 PF01081 KDPG and KHG aldolase APJL_RS05090 PF00294 pfkB family carbohydrate kinase APJL_RS05095 PF02614 Glucuronate isomerase APJL_RS05100 PF01055 Glycosyl hydrolases family 31 APJL_RS05100 PF16338 Domain of unknown function (DUF4968) APJL_RS05100 PF13802 Galactose mutarotase-like APJL_RS05100 PF17137 Domain of unknown function (DUF5110) APJL_RS05105 PF00392 Bacterial regulatory proteins, gntR family APJL_RS05105 PF07729 FCD domain APJL_RS05115 PF01625 Peptide methionine sulfoxide reductase APJL_RS05115 PF01641 SelR domain APJL_RS05120 PF00535 Glycosyl transferase family 2 APJL_RS05125 PF00535 Glycosyl transferase family 2 APJL_RS05135 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) APJL_RS05145 PF04230 Polysaccharide pyruvyl transferase APJL_RS05150 PF02698 DUF218 domain APJL_RS05155 PF18319 PriA DNA helicase Cys-rich region (CRR) domain APJL_RS05155 PF00271 Helicase conserved C-terminal domain APJL_RS05155 PF00270 DEAD/DEAH box helicase APJL_RS05155 PF17764 3′ DNA-binding domain (3′BD) APJL_RS05155 PF18074 Primosomal protein N C-terminal domain APJL_RS05160 PF01817 Chorismate mutase type II APJL_RS05160 PF00800 Prephenate dehydratase APJL_RS05165 PF01432 Peptidase family M3 APJL_RS05170 PF04055 Radical SAM superfamily APJL_RS05175 PF02901 Pyruvate formate lyase-like APJL_RS05175 PF01228 Glycine radical APJL_RS05180 PF01226 Formate/nitrite transporter APJL_RS05190 PF01435 Peptidase family M48 APJL_RS05195 PF00817 impB/mucB/samB family APJL_RS05195 PF11798 IMS family HHH motif APJL_RS05195 PF11799 impB/mucB/samB family C-terminal domain APJL_RS05200 PF03956 Lysine exporter LysO APJL_RS05205 PF00425 chorismate binding enzyme APJL_RS05210 PF00155 Aminotransferase class I and II APJL_RS05215 PF00892 EamA-like transporter family APJL_RS05220 PF00892 EamA-like transporter family APJL_RS05225 PF01810 LysE type translocator APJL_RS05230 PF04886 PT repeat APJL_RS05230 PF07715 TonB-dependent Receptor Plug Domain APJL_RS05230 PF00593 TonB dependent receptor APJL_RS05235 PF01243 Pyridoxamine 5'-phosphate oxidase APJL_RS05245 PF03918 Cytochrome C biogenesis protein APJL_RS05250 PF08534 Redoxin APJL_RS05255 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal APJL_RS05255 PF01578 Cytochrome C assembly protein APJL_RS05260 PF02254 TrkA-N domain APJL_RS05260 PF00999 Sodium/hydrogen exchanger family APJL_RS05265 PF01295 Adenylate cyclase, class-I APJL_RS05265 PF12633 Adenylate cyclase NT domain APJL_RS05270 PF02801 Beta-ketoacyl synthase, C-terminal domain APJL_RS05270 PF00109 Beta-ketoacyl synthase, N-terminal domain APJL_RS05280 PF13333 Integrase core domain APJL_RS05280 PF00665 Integrase core domain APJL_RS05285 PF04076 Bacterial OB fold (BOF) protein APJL_RS05300 PF00486 Transcriptional regulatory protein, C terminal APJL_RS05300 PF00072 Response regulator receiver domain APJL_RS05305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APJL_RS05305 PF08521 Two-component sensor kinase N-terminal APJL_RS05305 PF00512 His Kinase A (phospho-acceptor) domain APJL_RS05310 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) APJL_RS05315 PF02699 Preprotein translocase subunit APJL_RS05320 PF13721 SecD export protein N-terminal TM region APJL_RS05320 PF07549 SecD/SecF GG Motif APJL_RS05320 PF02355 Protein export membrane protein APJL_RS05325 PF02355 Protein export membrane protein APJL_RS05325 PF07549 SecD/SecF GG Motif APJL_RS05330 PF00210 Ferritin-like domain APJL_RS05335 PF00210 Ferritin-like domain APJL_RS05340 PF00860 Permease family APJL_RS05345 PF02545 Maf-like protein APJL_RS05355 PF02926 THUMP domain APJL_RS05355 PF02568 Thiamine biosynthesis protein (ThiI) APJL_RS05360 PF00709 Adenylosuccinate synthetase APJL_RS05365 PF01145 SPFH domain / Band 7 family APJL_RS05370 PF01145 SPFH domain / Band 7 family APJL_RS05375 PF00085 Thioredoxin APJL_RS05380 PF00860 Permease family APJL_RS05385 PF00438 S-adenosylmethionine synthetase, N-terminal domain APJL_RS05385 PF02773 S-adenosylmethionine synthetase, C-terminal domain APJL_RS05385 PF02772 S-adenosylmethionine synthetase, central domain APJL_RS05395 PF13520 Amino acid permease APJL_RS05400 PF13520 Amino acid permease APJL_RS05410 PF07687 Peptidase dimerisation domain APJL_RS05410 PF01546 Peptidase family M20/M25/M40 APJL_RS05415 PF03922 OmpW family APJL_RS05420 PF10431 C-terminal, D2-small domain, of ClpB protein APJL_RS05420 PF17871 AAA lid domain APJL_RS05420 PF07724 AAA domain (Cdc48 subfamily) APJL_RS05420 PF00004 ATPase family associated with various cellular activities (AAA) APJL_RS05420 PF02861 Clp amino terminal domain, pathogenicity island component APJL_RS05425 PF01758 Sodium Bile acid symporter family APJL_RS05430 PF03960 ArsC family APJL_RS05440 PF00206 Lyase APJL_RS05440 PF10415 Fumarase C C-terminus APJL_RS05450 PF00586 AIR synthase related protein, N-terminal domain APJL_RS05450 PF02769 AIR synthase related protein, C-terminal domain APJL_RS05455 PF00746 LPXTG cell wall anchor motif APJL_RS05455 PF04650 YSIRK type signal peptide APJL_RS05455 PF00728 Glycosyl hydrolase family 20, catalytic domain APJL_RS05455 PF07501 G5 domain APJL_RS05460 PF06508 Queuosine biosynthesis protein QueC APJL_RS05465 PF01242 6-pyruvoyl tetrahydropterin synthase APJL_RS05470 PF04055 Radical SAM superfamily APJL_RS05485 PF00883 Cytosol aminopeptidase family, catalytic domain APJL_RS05485 PF02789 Cytosol aminopeptidase family, N-terminal domain APJL_RS05495 PF03739 Lipopolysaccharide export system permease LptF/LptG APJL_RS05500 PF03739 Lipopolysaccharide export system permease LptF/LptG APJL_RS05505 PF01336 OB-fold nucleic acid binding domain APJL_RS05505 PF02811 PHP domain APJL_RS05505 PF14579 Helix-hairpin-helix motif APJL_RS05505 PF17657 Bacterial DNA polymerase III alpha subunit finger domain APJL_RS05505 PF07733 Bacterial DNA polymerase III alpha NTPase domain APJL_RS05510 PF01370 NAD dependent epimerase/dehydratase family APJL_RS05510 PF02222 ATP-grasp domain APJL_RS05525 PF01370 NAD dependent epimerase/dehydratase family APJL_RS05525 PF02222 ATP-grasp domain APJL_RS05530 PF01553 Acyltransferase APJL_RS05535 PF00717 Peptidase S24-like APJL_RS05535 PF01726 LexA DNA binding domain APJL_RS05540 PF02976 DNA mismatch repair enzyme MutH APJL_RS05545 PF03741 Integral membrane protein TerC family APJL_RS05550 PF00933 Glycosyl hydrolase family 3 N terminal domain APJL_RS05555 PF05958 tRNA (Uracil-5-)-methyltransferase APJL_RS05560 PF03952 Enolase, N-terminal domain APJL_RS05560 PF00113 Enolase, C-terminal TIM barrel domain APJL_RS05565 PF00293 NUDIX domain APJL_RS05570 PF10008 Uncharacterized protein conserved in bacteria (DUF2251) APJL_RS05575 PF09382 RQC domain APJL_RS05575 PF00271 Helicase conserved C-terminal domain APJL_RS05575 PF00270 DEAD/DEAH box helicase APJL_RS05575 PF16124 RecQ zinc-binding APJL_RS05575 PF00570 HRDC domain APJL_RS05580 PF01491 Frataxin-like domain APJL_RS05585 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) APJL_RS05590 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) APJL_RS05595 PF00814 Glycoprotease family APJL_RS05600 PF13525 Outer membrane lipoprotein APJL_RS05605 PF00849 RNA pseudouridylate synthase APJL_RS05605 PF01479 S4 domain APJL_RS05610 PF14256 YwiC-like protein APJL_RS05615 PF00365 Phosphofructokinase APJL_RS05620 PF00266 Aminotransferase class-V APJL_RS05625 PF00565 Staphylococcal nuclease homologue APJL_RS05630 PF01235 Sodium:alanine symporter family APJL_RS05635 PF01594 AI-2E family transporter APJL_RS05645 PF16325 Peptidase family U32 C-terminal domain APJL_RS05645 PF01136 Peptidase family U32 APJL_RS05650 PF04932 O-Antigen ligase APJL_RS05655 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) APJL_RS05655 PF00534 Glycosyl transferases group 1 APJL_RS05660 PF01467 Cytidylyltransferase-like APJL_RS05665 PF00929 Exonuclease APJL_RS05670 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE APJL_RS05675 PF01520 N-acetylmuramoyl-L-alanine amidase APJL_RS05675 PF01476 LysM domain APJL_RS05680 PF00342 Phosphoglucose isomerase APJL_RS05685 PF04380 Membrane fusogenic activity APJL_RS05710 PF01488 Shikimate / quinate 5-dehydrogenase APJL_RS05710 PF18317 Shikimate 5'-dehydrogenase C-terminal domain APJL_RS05710 PF08501 Shikimate dehydrogenase substrate binding domain APJL_RS05715 PF01300 Telomere recombination APJL_RS05720 PF01396 Topoisomerase DNA binding C4 zinc finger APJL_RS05725 PF04266 ASCH domain APJL_RS05735 PF00154 recA bacterial DNA recombination protein APJL_RS05740 PF01063 Amino-transferase class IV APJL_RS05745 PF00425 chorismate binding enzyme APJL_RS05750 PF02646 RmuC family APJL_RS05755 PF00117 Glutamine amidotransferase class-I APJL_RS05760 PF02537 CrcB-like protein, Camphor Resistance (CrcB) APJL_RS05760 PF03625 Domain of unknown function DUF302 APJL_RS05765 PF02938 GAD domain APJL_RS05765 PF01336 OB-fold nucleic acid binding domain APJL_RS05765 PF00152 tRNA synthetases class II (D, K and N) APJL_RS05770 PF00293 NUDIX domain APJL_RS05775 PF01709 Transcriptional regulator APJL_RS05785 PF02075 Crossover junction endodeoxyribonuclease RuvC APJL_RS05790 PF00675 Insulinase (Peptidase family M16) APJL_RS05790 PF05193 Peptidase M16 inactive domain APJL_RS05795 PF08267 Cobalamin-independent synthase, N-terminal domain APJL_RS05795 PF01717 Cobalamin-independent synthase, Catalytic domain APJL_RS05800 PF00939 Sodium:sulfate symporter transmembrane region APJL_RS05805 PF03466 LysR substrate binding domain APJL_RS05805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APJL_RS05810 PF01298 C-lobe and N-lobe beta barrels of Tf-binding protein B APJL_RS05815 PF01479 S4 domain APJL_RS05815 PF00849 RNA pseudouridylate synthase APJL_RS05820 PF01300 Telomere recombination APJL_RS05830 PF04261 Dyp-type peroxidase family APJL_RS05835 PF00425 chorismate binding enzyme APJL_RS05835 PF04715 Anthranilate synthase component I, N terminal region APJL_RS05840 PF00117 Glutamine amidotransferase class-I APJL_RS05845 PF00591 Glycosyl transferase family, a/b domain APJL_RS05845 PF02885 Glycosyl transferase family, helical bundle domain APJL_RS05850 PF08241 Methyltransferase domain APJL_RS05855 PF16036 Chalcone isomerase-like APJL_RS05860 PF04325 Protein of unknown function (DUF465) APJL_RS05865 PF01281 Ribosomal protein L9, N-terminal domain APJL_RS05865 PF03948 Ribosomal protein L9, C-terminal domain APJL_RS05870 PF01084 Ribosomal protein S18 APJL_RS05875 PF00436 Single-strand binding protein family APJL_RS05880 PF01250 Ribosomal protein S6 APJL_RS05885 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain APJL_RS05885 PF02843 Phosphoribosylglycinamide synthetase, C domain APJL_RS05885 PF02844 Phosphoribosylglycinamide synthetase, N domain APJL_RS05890 PF04973 Nicotinamide mononucleotide transporter APJL_RS05895 PF09976 Tetratricopeptide repeat-like domain APJL_RS05900 PF03129 Anticodon binding domain APJL_RS05900 PF13393 Histidyl-tRNA synthetase APJL_RS05905 PF04551 GcpE protein APJL_RS05910 PF13464 Domain of unknown function (DUF4115) APJL_RS05915 PF01740 STAS domain APJL_RS05915 PF00916 Sulfate permease family APJL_RS05920 PF14698 Argininosuccinate lyase C-terminal APJL_RS05920 PF00206 Lyase APJL_RS05925 PF01408 Oxidoreductase family, NAD-binding Rossmann fold APJL_RS05925 PF02894 Oxidoreductase family, C-terminal alpha/beta domain APJL_RS05930 PF00999 Sodium/hydrogen exchanger family APJL_RS05930 PF02254 TrkA-N domain APJL_RS05945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APJL_RS05945 PF03466 LysR substrate binding domain APJL_RS05960 PF06719 AraC-type transcriptional regulator N-terminus APJL_RS05960 PF12833 Helix-turn-helix domain APJL_RS05965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APJL_RS05965 PF03466 LysR substrate binding domain APJL_RS05970 PF00724 NADH:flavin oxidoreductase / NADH oxidase family APJL_RS05975 PF00296 Luciferase-like monooxygenase APJL_RS05980 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase APJL_RS05980 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase APJL_RS05985 PF00881 Nitroreductase family APJL_RS05990 PF01914 MarC family integral membrane protein APJL_RS06000 PF00756 Putative esterase APJL_RS06005 PF02798 Glutathione S-transferase, N-terminal domain APJL_RS06020 PF08240 Alcohol dehydrogenase GroES-like domain APJL_RS06020 PF00107 Zinc-binding dehydrogenase APJL_RS06025 PF02028 BCCT, betaine/carnitine/choline family transporter APJL_RS06040 PF03595 Voltage-dependent anion channel APJL_RS06045 PF13419 Haloacid dehalogenase-like hydrolase APJL_RS06055 PF00664 ABC transporter transmembrane region APJL_RS06055 PF00005 ABC transporter APJL_RS06060 PF02664 S-Ribosylhomocysteinase (LuxS) APJL_RS06065 PF02470 MlaD protein APJL_RS06070 PF01475 Ferric uptake regulator family APJL_RS06075 PF00258 Flavodoxin APJL_RS06080 PF01402 Ribbon-helix-helix protein, copG family APJL_RS06085 PF04073 Aminoacyl-tRNA editing domain APJL_RS06095 PF00860 Permease family APJL_RS06100 PF02635 DsrE/DsrF-like family APJL_RS06110 PF01176 Translation initiation factor 1A / IF-1 APJL_RS06115 PF10144 Bacterial virulence factor haemolysin APJL_RS06120 PF18429 Domain of unknown function (DUF5609) APJL_RS06125 PF04461 Protein of unknown function (DUF520) APJL_RS06135 PF00343 Carbohydrate phosphorylase APJL_RS06140 PF17874 MalT-like TPR region APJL_RS06140 PF00196 Bacterial regulatory proteins, luxR family APJL_RS06145 PF07148 Maltose operon periplasmic protein precursor (MalM) APJL_RS06150 PF02264 LamB porin APJL_RS06155 PF17912 MalK OB fold domain APJL_RS06155 PF00005 ABC transporter APJL_RS06160 PF01547 Bacterial extracellular solute-binding protein APJL_RS06165 PF14785 Maltose transport system permease protein MalF P2 domain APJL_RS06165 PF00528 Binding-protein-dependent transport system inner membrane component APJL_RS06170 PF00528 Binding-protein-dependent transport system inner membrane component APJL_RS06175 PF02446 4-alpha-glucanotransferase APJL_RS06180 PF02554 Carbon starvation protein CstA APJL_RS06185 PF01026 TatD related DNase APJL_RS06190 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain APJL_RS06190 PF07992 Pyridine nucleotide-disulphide oxidoreductase APJL_RS06195 PF03350 Uncharacterized protein family, UPF0114 APJL_RS06200 PF00881 Nitroreductase family APJL_RS06215 PF00005 ABC transporter APJL_RS06220 PF01116 Fructose-bisphosphate aldolase class-II APJL_RS06225 PF00162 Phosphoglycerate kinase APJL_RS06230 PF00939 Sodium:sulfate symporter transmembrane region APJL_RS06235 PF00939 Sodium:sulfate symporter transmembrane region APJL_RS06240 PF00939 Sodium:sulfate symporter transmembrane region APJL_RS06245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APJL_RS06245 PF00986 DNA gyrase B subunit, carboxyl terminus APJL_RS06245 PF01751 Toprim domain APJL_RS06245 PF00204 DNA gyrase B APJL_RS06250 PF00512 His Kinase A (phospho-acceptor) domain APJL_RS06250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APJL_RS06255 PF00486 Transcriptional regulatory protein, C terminal APJL_RS06255 PF00072 Response regulator receiver domain APJL_RS06260 PF00005 ABC transporter APJL_RS06265 PF00528 Binding-protein-dependent transport system inner membrane component APJL_RS06270 PF00528 Binding-protein-dependent transport system inner membrane component APJL_RS06275 PF12849 PBP superfamily domain APJL_RS06280 PF00376 MerR family regulatory protein APJL_RS06280 PF09278 MerR, DNA binding APJL_RS06290 PF00403 Heavy-metal-associated domain APJL_RS06295 PF00403 Heavy-metal-associated domain APJL_RS06300 PF00106 short chain dehydrogenase APJL_RS06305 PF00881 Nitroreductase family APJL_RS06310 PF01343 Peptidase family S49 APJL_RS06315 PF00445 Ribonuclease T2 family APJL_RS06320 PF17283 SprT-like zinc ribbon domain APJL_RS06320 PF10263 SprT-like family APJL_RS06325 PF07992 Pyridine nucleotide-disulphide oxidoreductase APJL_RS06330 PF00575 S1 RNA binding domain APJL_RS06330 PF09371 Tex-like protein N-terminal domain APJL_RS06330 PF16921 Tex protein YqgF-like domain APJL_RS06330 PF17674 HHH domain APJL_RS06340 PF04055 Radical SAM superfamily APJL_RS06365 PF00749 tRNA synthetases class I (E and Q), catalytic domain APJL_RS06375 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system APJL_RS06380 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system APJL_RS06385 PF03966 Trm112p-like protein APJL_RS06390 PF02606 Tetraacyldisaccharide-1-P 4'-kinase APJL_RS06395 PF07724 AAA domain (Cdc48 subfamily) APJL_RS06395 PF10431 C-terminal, D2-small domain, of ClpB protein APJL_RS06395 PF06689 ClpX C4-type zinc finger APJL_RS06400 PF00574 Clp protease APJL_RS06405 PF02657 Fe-S metabolism associated domain APJL_RS06420 PF00929 Exonuclease APJL_RS06425 PF12848 ABC transporter APJL_RS06425 PF00005 ABC transporter APJL_RS06430 PF02627 Carboxymuconolactone decarboxylase family APJL_RS06445 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) APJL_RS06450 PF01722 BolA-like protein APJL_RS06460 PF05494 MlaC protein APJL_RS06465 PF02470 MlaD protein APJL_RS06470 PF02405 Permease MlaE APJL_RS06475 PF00005 ABC transporter APJL_RS06480 PF00595 PDZ domain APJL_RS06485 PF01370 NAD dependent epimerase/dehydratase family APJL_RS06485 PF08338 Domain of unknown function (DUF1731) APJL_RS06490 PF01316 Arginine repressor, DNA binding domain APJL_RS06490 PF02863 Arginine repressor, C-terminal domain APJL_RS06495 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain APJL_RS06495 PF00056 lactate/malate dehydrogenase, NAD binding domain APJL_RS06505 PF05191 Adenylate kinase, active site lid APJL_RS06515 PF07690 Major Facilitator Superfamily APJL_RS06520 PF01370 NAD dependent epimerase/dehydratase family APJL_RS06525 PF00533 BRCA1 C Terminus (BRCT) domain APJL_RS06525 PF12826 Helix-hairpin-helix motif APJL_RS06525 PF03119 NAD-dependent DNA ligase C4 zinc finger domain APJL_RS06525 PF03120 NAD-dependent DNA ligase OB-fold domain APJL_RS06525 PF01653 NAD-dependent DNA ligase adenylation domain APJL_RS06530 PF04354 ZipA, C-terminal FtsZ-binding domain APJL_RS06545 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain APJL_RS06545 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase APJL_RS06555 PF01177 Asp/Glu/Hydantoin racemase APJL_RS06560 PF07690 Major Facilitator Superfamily APJL_RS06565 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase APJL_RS06570 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain APJL_RS06570 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain APJL_RS06575 PF00459 Inositol monophosphatase family APJL_RS06580 PF00293 NUDIX domain APJL_RS06585 PF01479 S4 domain APJL_RS06590 PF01430 Hsp33 protein APJL_RS06595 PF03605 Anaerobic c4-dicarboxylate membrane transporter APJL_RS06600 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain APJL_RS06600 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain APJL_RS06605 PF00696 Amino acid kinase family APJL_RS06610 PF00367 phosphotransferase system, EIIB APJL_RS06610 PF02378 Phosphotransferase system, EIIC APJL_RS06615 PF00005 ABC transporter APJL_RS06620 PF00528 Binding-protein-dependent transport system inner membrane component APJL_RS06625 PF00381 PTS HPr component phosphorylation site APJL_RS06630 PF02896 PEP-utilising enzyme, TIM barrel domain APJL_RS06630 PF00391 PEP-utilising enzyme, mobile domain APJL_RS06630 PF05524 PEP-utilising enzyme, N-terminal APJL_RS06635 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 APJL_RS06640 PF00919 Uncharacterized protein family UPF0004 APJL_RS06640 PF01938 TRAM domain APJL_RS06640 PF04055 Radical SAM superfamily APJL_RS06645 PF13361 UvrD-like helicase C-terminal domain APJL_RS06645 PF00580 UvrD/REP helicase N-terminal domain APJL_RS06650 PF02492 CobW/HypB/UreG, nucleotide-binding domain APJL_RS06655 PF01924 Hydrogenase formation hypA family APJL_RS06660 PF02769 AIR synthase related protein, C-terminal domain APJL_RS06660 PF00586 AIR synthase related protein, N-terminal domain APJL_RS06665 PF13533 Biotin-lipoyl like APJL_RS06670 PF00005 ABC transporter APJL_RS06670 PF00664 ABC transporter transmembrane region APJL_RS06670 PF03412 Peptidase C39 family APJL_RS06675 PF02382 N-terminal domain in RTX protein APJL_RS06675 PF08339 RTX C-terminal domain APJL_RS06675 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) APJL_RS06680 PF02794 RTX toxin acyltransferase family APJL_RS06685 PF07503 HypF finger APJL_RS06685 PF01300 Telomere recombination APJL_RS06685 PF17788 HypF Kae1-like domain APJL_RS06685 PF00708 Acylphosphatase APJL_RS06690 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal APJL_RS06690 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit APJL_RS06695 PF13247 4Fe-4S dicluster domain APJL_RS06700 PF03916 Polysulphide reductase, NrfD APJL_RS06705 PF00374 Nickel-dependent hydrogenase APJL_RS06710 PF01750 Hydrogenase maturation protease APJL_RS06715 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE APJL_RS06720 PF01455 HupF/HypC family APJL_RS06725 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA APJL_RS06760 PF17757 UvrB interaction domain APJL_RS06760 PF02559 CarD-like/TRCF domain APJL_RS06760 PF03461 TRCF domain APJL_RS06760 PF00270 DEAD/DEAH box helicase APJL_RS06760 PF00271 Helicase conserved C-terminal domain APJL_RS06765 PF01433 Peptidase family M1 domain APJL_RS06765 PF11940 Domain of unknown function (DUF3458) Ig-like fold APJL_RS06765 PF17432 Domain of unknown function (DUF3458_C) ARM repeats APJL_RS06770 PF02660 Glycerol-3-phosphate acyltransferase APJL_RS06775 PF02152 Dihydroneopterin aldolase APJL_RS06780 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region APJL_RS06780 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region APJL_RS06785 PF18075 FtsX extracellular domain APJL_RS06790 PF00005 ABC transporter APJL_RS06795 PF00448 SRP54-type protein, GTPase domain APJL_RS06795 PF02881 SRP54-type protein, helical bundle domain APJL_RS06805 PF04269 Protein of unknown function, DUF440 APJL_RS06810 PF01613 Flavin reductase like domain APJL_RS06815 PF09313 Domain of unknown function (DUF1971) APJL_RS06815 PF03848 Tellurite resistance protein TehB APJL_RS06820 PF00528 Binding-protein-dependent transport system inner membrane component APJL_RS06825 PF00528 Binding-protein-dependent transport system inner membrane component APJL_RS06830 PF00497 Bacterial extracellular solute-binding proteins, family 3 APJL_RS06835 PF00005 ABC transporter APJL_RS06840 PF01161 Phosphatidylethanolamine-binding protein APJL_RS06845 PF01699 Sodium/calcium exchanger protein APJL_RS06850 PF01381 Helix-turn-helix APJL_RS06860 PF02683 Cytochrome C biogenesis protein transmembrane region APJL_RS06860 PF11412 Disulphide bond corrector protein DsbC APJL_RS06860 PF13098 Thioredoxin-like domain APJL_RS06865 PF04315 Elongation factor P hydroxylase APJL_RS06870 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases APJL_RS06875 PF04348 LppC putative lipoprotein APJL_RS06880 PF02021 Uncharacterised protein family UPF0102 APJL_RS06885 PF13580 SIS domain APJL_RS06890 PF04972 BON domain APJL_RS06895 PF01464 Transglycosylase SLT domain APJL_RS06895 PF00497 Bacterial extracellular solute-binding proteins, family 3 APJL_RS06915 PF01578 Cytochrome C assembly protein APJL_RS06915 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal APJL_RS06920 PF03100 CcmE APJL_RS06925 PF04995 Heme exporter protein D (CcmD) APJL_RS06930 PF01578 Cytochrome C assembly protein APJL_RS06935 PF03379 CcmB protein APJL_RS06940 PF00005 ABC transporter APJL_RS06945 PF00308 Bacterial dnaA protein APJL_RS06980 PF04277 Oxaloacetate decarboxylase, gamma chain APJL_RS06985 PF00682 HMGL-like APJL_RS06985 PF00364 Biotin-requiring enzyme APJL_RS06985 PF02436 Conserved carboxylase domain APJL_RS06990 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit APJL_RS06995 PF08274 PhnA Zinc-Ribbon APJL_RS06995 PF03831 PhnA domain APJL_RS07000 PF14376 Haem-binding domain APJL_RS07000 PF00034 Cytochrome c APJL_RS07000 PF03150 Di-haem cytochrome c peroxidase APJL_RS07005 PF02594 Uncharacterised ACR, YggU family COG1872 APJL_RS07010 PF02325 YGGT family APJL_RS07015 PF04320 Protein with unknown function (DUF469) APJL_RS07020 PF02390 Putative methyltransferase APJL_RS07025 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III APJL_RS07025 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal APJL_RS07030 PF02504 Fatty acid synthesis protein APJL_RS07035 PF01783 Ribosomal L32p protein family APJL_RS07040 PF02620 Large ribosomal RNA subunit accumulation protein YceD APJL_RS07045 PF01578 Cytochrome C assembly protein APJL_RS07050 PF03471 Transporter associated domain APJL_RS07050 PF00571 CBS domain APJL_RS07050 PF01595 Cyclin M transmembrane N-terminal domain APJL_RS07055 PF00209 Sodium:neurotransmitter symporter family APJL_RS07065 PF03610 PTS system fructose IIA component APJL_RS07065 PF03830 PTS system sorbose subfamily IIB component APJL_RS07070 PF03609 PTS system sorbose-specific iic component APJL_RS07075 PF03613 PTS system mannose/fructose/sorbose family IID component APJL_RS07080 PF06173 Protein of unknown function (DUF986) APJL_RS07085 PF01238 Phosphomannose isomerase type I APJL_RS07100 PF00528 Binding-protein-dependent transport system inner membrane component APJL_RS07105 PF00005 ABC transporter APJL_RS07105 PF08402 TOBE domain APJL_RS07110 PF08245 Mur ligase middle domain APJL_RS07110 PF02875 Mur ligase family, glutamate ligase domain APJL_RS07110 PF01225 Mur ligase family, catalytic domain APJL_RS07115 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain APJL_RS07125 PF03144 Elongation factor Tu domain 2 APJL_RS07125 PF03143 Elongation factor Tu C-terminal domain APJL_RS07125 PF00009 Elongation factor Tu GTP binding domain APJL_RS07135 PF00177 Ribosomal protein S7p/S5e APJL_RS07140 PF00164 Ribosomal protein S12/S23 APJL_RS07145 PF01075 Glycosyltransferase family 9 (heptosyltransferase) APJL_RS07150 PF01075 Glycosyltransferase family 9 (heptosyltransferase) APJL_RS07160 PF08525 Opacity-associated protein A N-terminal motif APJL_RS07160 PF04225 Opacity-associated protein A LysM-like domain APJL_RS07170 PF02666 Phosphatidylserine decarboxylase APJL_RS07175 PF08463 EcoEI R protein C-terminal APJL_RS07175 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) APJL_RS07175 PF04851 Type III restriction enzyme, res subunit APJL_RS07175 PF00271 Helicase conserved C-terminal domain APJL_RS07180 PF12161 HsdM N-terminal domain APJL_RS07180 PF02384 N-6 DNA Methylase APJL_RS07190 PF01420 Type I restriction modification DNA specificity domain APJL_RS07195 PF00589 Phage integrase family APJL_RS07195 PF02899 Phage integrase, N-terminal SAM-like domain APJL_RS07205 PF18419 ATP-grasp-like domain APJL_RS07205 PF04262 Glutamate-cysteine ligase APJL_RS07205 PF02655 ATP-grasp domain APJL_RS07215 PF03222 Tryptophan/tyrosine permease family APJL_RS07220 PF04175 Protein of unknown function (DUF406) APJL_RS07230 PF00501 AMP-binding enzyme APJL_RS07235 PF06039 Malate:quinone oxidoreductase (Mqo) APJL_RS07255 PF02653 Branched-chain amino acid transport system / permease component APJL_RS07260 PF00005 ABC transporter APJL_RS07265 PF13407 Periplasmic binding protein domain APJL_RS07270 PF01389 OmpA-like transmembrane domain APJL_RS07270 PF00691 OmpA family APJL_RS07275 PF01565 FAD binding domain APJL_RS07275 PF02913 FAD linked oxidases, C-terminal domain APJL_RS07275 PF13183 4Fe-4S dicluster domain APJL_RS07280 PF03061 Thioesterase superfamily APJL_RS07285 PF14849 YidC periplasmic domain APJL_RS07285 PF02096 60Kd inner membrane protein APJL_RS07290 PF03264 NapC/NirT cytochrome c family, N-terminal region APJL_RS07295 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) APJL_RS07300 PF12801 4Fe-4S binding domain APJL_RS07300 PF12837 4Fe-4S binding domain APJL_RS07305 PF12800 4Fe-4S binding domain APJL_RS07305 PF12838 4Fe-4S dicluster domain APJL_RS07310 PF10518 TAT (twin-arginine translocation) pathway signal sequence APJL_RS07310 PF04879 Molybdopterin oxidoreductase Fe4S4 domain APJL_RS07310 PF00384 Molybdopterin oxidoreductase APJL_RS07310 PF01568 Molydopterin dinucleotide binding domain APJL_RS07320 PF12838 4Fe-4S dicluster domain APJL_RS07320 PF13187 4Fe-4S dicluster domain APJL_RS07325 PF02525 Flavodoxin-like fold APJL_RS07330 PF13333 Integrase core domain APJL_RS07330 PF00665 Integrase core domain APJL_RS07345 PF10150 Ribonuclease E/G family APJL_RS07345 PF00575 S1 RNA binding domain APJL_RS07345 PF12111 Polyribonucleotide phosphorylase C terminal APJL_RS07355 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family APJL_RS07360 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase APJL_RS07365 PF01297 Zinc-uptake complex component A periplasmic APJL_RS07375 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain APJL_RS07375 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain APJL_RS07380 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) APJL_RS07385 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain APJL_RS07385 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III APJL_RS07385 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II APJL_RS07385 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I APJL_RS07390 PF00585 C-terminal regulatory domain of Threonine dehydratase APJL_RS07390 PF00291 Pyridoxal-phosphate dependent enzyme APJL_RS07395 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase APJL_RS07400 PF00230 Major intrinsic protein APJL_RS07410 PF01980 tRNA-methyltransferase O APJL_RS07410 PF18389 TrmO C-terminal domain APJL_RS07415 PF17761 DUF1016 N-terminal domain APJL_RS07415 PF06250 YhcG PDDEXK nuclease domain APJL_RS07420 PF01040 UbiA prenyltransferase family APJL_RS07425 PF01521 Iron-sulphur cluster biosynthesis APJL_RS07440 PF13439 Glycosyltransferase Family 4 APJL_RS07440 PF00534 Glycosyl transferases group 1 APJL_RS07460 PF01943 Polysaccharide biosynthesis protein APJL_RS07465 PF03275 UDP-galactopyranose mutase APJL_RS07470 PF02397 Bacterial sugar transferase APJL_RS07475 PF01757 Acyltransferase family APJL_RS07490 PF16363 GDP-mannose 4,6 dehydratase APJL_RS07495 PF01165 Ribosomal protein S21 APJL_RS07500 PF08275 DNA primase catalytic core, N-terminal domain APJL_RS07500 PF10410 DnaB-helicase binding domain of primase APJL_RS07500 PF08278 DNA primase DnaG DnaB-binding APJL_RS07500 PF01807 CHC2 zinc finger APJL_RS07505 PF04542 Sigma-70 region 2 APJL_RS07505 PF00140 Sigma-70 factor, region 1.2 APJL_RS07505 PF04539 Sigma-70 region 3 APJL_RS07505 PF03979 Sigma-70 factor, region 1.1 APJL_RS07505 PF04545 Sigma-70, region 4 APJL_RS07505 PF04546 Sigma-70, non-essential region APJL_RS07510 PF01479 S4 domain APJL_RS07510 PF00579 tRNA synthetases class I (W and Y) APJL_RS07520 PF00575 S1 RNA binding domain APJL_RS07520 PF08206 Ribonuclease B OB domain APJL_RS07520 PF00773 RNB domain APJL_RS07520 PF17876 Cold shock domain APJL_RS07520 PF08461 Ribonuclease R winged-helix domain APJL_RS07525 PF00578 AhpC/TSA family APJL_RS07530 PF00440 Bacterial regulatory proteins, tetR family APJL_RS07535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APJL_RS07535 PF03466 LysR substrate binding domain APJL_RS07540 PF08534 Redoxin APJL_RS07540 PF00462 Glutaredoxin APJL_RS07555 PF08543 Phosphomethylpyrimidine kinase APJL_RS07565 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit APJL_RS07570 PF07732 Multicopper oxidase APJL_RS07570 PF07731 Multicopper oxidase APJL_RS07575 PF01553 Acyltransferase APJL_RS07580 PF08534 Redoxin APJL_RS07585 PF01926 50S ribosome-binding GTPase APJL_RS07585 PF10396 GTP-binding protein TrmE N-terminus APJL_RS07585 PF12631 MnmE helical domain APJL_RS07590 PF05167 Uncharacterised ACR (DUF711) APJL_RS07600 PF17954 Quercetinase C-terminal cupin domain APJL_RS07600 PF02678 Pirin APJL_RS07605 PF00210 Ferritin-like domain APJL_RS07620 PF12805 FUSC-like inner membrane protein yccS APJL_RS07625 PF02142 MGS-like domain APJL_RS07630 PF00291 Pyridoxal-phosphate dependent enzyme APJL_RS07630 PF14821 Threonine synthase N terminus APJL_RS07640 PF00665 Integrase core domain APJL_RS07640 PF13333 Integrase core domain APJL_RS07645 PF08264 Anticodon-binding domain of tRNA APJL_RS07645 PF00133 tRNA synthetases class I (I, L, M and V) APJL_RS07645 PF10458 Valyl tRNA synthetase tRNA binding arm APJL_RS07655 PF13673 Acetyltransferase (GNAT) domain APJL_RS07660 PF04364 DNA polymerase III chi subunit, HolC APJL_RS07665 PF01476 LysM domain APJL_RS07670 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase APJL_RS07670 PF05698 Bacterial trigger factor protein (TF) C-terminus APJL_RS07670 PF05697 Bacterial trigger factor protein (TF) APJL_RS07675 PF00581 Rhodanese-like domain APJL_RS07680 PF02556 Preprotein translocase subunit SecB APJL_RS07685 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus APJL_RS07685 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus APJL_RS07690 PF00132 Bacterial transferase hexapeptide (six repeats) APJL_RS07690 PF06426 Serine acetyltransferase, N-terminal APJL_RS07695 PF03143 Elongation factor Tu C-terminal domain APJL_RS07695 PF03144 Elongation factor Tu domain 2 APJL_RS07695 PF00009 Elongation factor Tu GTP binding domain APJL_RS07720 PF00485 Phosphoribulokinase / Uridine kinase family APJL_RS07725 PF08534 Redoxin APJL_RS07730 PF03918 Cytochrome C biogenesis protein APJL_RS07735 PF03918 Cytochrome C biogenesis protein APJL_RS07740 PF00994 Probable molybdopterin binding domain APJL_RS07745 PF00543 Nitrogen regulatory protein P-II APJL_RS07750 PF01252 Signal peptidase (SPase) II APJL_RS07755 PF02401 LytB protein APJL_RS07760 PF03937 Flavinator of succinate dehydrogenase APJL_RS07770 PF04055 Radical SAM superfamily APJL_RS07775 PF00043 Glutathione S-transferase, C-terminal domain APJL_RS07775 PF02798 Glutathione S-transferase, N-terminal domain APJL_RS07780 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain APJL_RS07780 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain APJL_RS07790 PF02313 Fumarate reductase subunit D APJL_RS07795 PF02300 Fumarate reductase subunit C APJL_RS07800 PF13183 4Fe-4S dicluster domain APJL_RS07800 PF13085 2Fe-2S iron-sulfur cluster binding domain APJL_RS07805 PF00890 FAD binding domain APJL_RS07805 PF02910 Fumarate reductase flavoprotein C-term APJL_RS07810 PF00152 tRNA synthetases class II (D, K and N) APJL_RS07815 PF01678 Diaminopimelate epimerase APJL_RS07820 PF03605 Anaerobic c4-dicarboxylate membrane transporter APJL_RS07825 PF02537 CrcB-like protein, Camphor Resistance (CrcB) APJL_RS07835 PF03702 Anhydro-N-acetylmuramic acid kinase APJL_RS07840 PF01380 SIS domain APJL_RS07860 PF01523 Putative modulator of DNA gyrase APJL_RS07865 PF01171 PP-loop family APJL_RS07865 PF09179 TilS substrate binding domain APJL_RS07865 PF11734 TilS substrate C-terminal domain APJL_RS07875 PF02899 Phage integrase, N-terminal SAM-like domain APJL_RS07875 PF00589 Phage integrase family APJL_RS07930 PF03808 Glycosyl transferase WecB/TagA/CpsF family APJL_RS07935 PF06899 WzyE protein, O-antigen assembly polymerase APJL_RS07940 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 APJL_RS07945 PF03063 Prismane/CO dehydrogenase family APJL_RS07950 PF00175 Oxidoreductase NAD-binding domain APJL_RS07950 PF00111 2Fe-2S iron-sulfur cluster binding domain APJL_RS07950 PF00970 Oxidoreductase FAD-binding domain APJL_RS07955 PF01943 Polysaccharide biosynthesis protein APJL_RS07960 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family APJL_RS07970 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain APJL_RS07970 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain APJL_RS07970 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain APJL_RS07975 PF02350 UDP-N-acetylglucosamine 2-epimerase APJL_RS07985 PF00953 Glycosyl transferase family 4 APJL_RS07990 PF00202 Aminotransferase class-III APJL_RS08000 PF03023 Lipid II flippase MurJ APJL_RS08005 PF01649 Ribosomal protein S20 APJL_RS08010 PF02080 TrkA-C domain APJL_RS08010 PF02254 TrkA-N domain APJL_RS08015 PF01029 NusB family APJL_RS08015 PF01189 16S rRNA methyltransferase RsmB/F APJL_RS08020 PF09106 Elongation factor SelB, winged helix APJL_RS08020 PF00009 Elongation factor Tu GTP binding domain APJL_RS08020 PF09107 Elongation factor SelB, winged helix APJL_RS08020 PF03144 Elongation factor Tu domain 2 APJL_RS08025 PF03841 L-seryl-tRNA selenium transferase APJL_RS08035 PF00258 Flavodoxin APJL_RS08040 PF00370 FGGY family of carbohydrate kinases, N-terminal domain APJL_RS08040 PF02782 FGGY family of carbohydrate kinases, C-terminal domain APJL_RS08055 PF07715 TonB-dependent Receptor Plug Domain APJL_RS08055 PF00593 TonB dependent receptor APJL_RS08060 PF01298 C-lobe and N-lobe beta barrels of Tf-binding protein B APJL_RS08060 PF17483 C-lobe handle domain of Tf-binding protein B APJL_RS08060 PF17484 N-Lobe handle Tf-binding protein B APJL_RS08065 PF02472 Biopolymer transport protein ExbD/TolR APJL_RS08070 PF01618 MotA/TolQ/ExbB proton channel family APJL_RS08080 PF03956 Lysine exporter LysO APJL_RS08085 PF02615 Malate/L-lactate dehydrogenase APJL_RS08090 PF02615 Malate/L-lactate dehydrogenase APJL_RS08100 PF17311 Family of unknown function (DUF5358) APJL_RS08125 PF01467 Cytidylyltransferase-like APJL_RS08135 PF02563 Polysaccharide biosynthesis/export protein APJL_RS08145 PF01061 ABC-2 type transporter APJL_RS08150 PF00005 ABC transporter APJL_RS08155 PF00005 ABC transporter APJL_RS08160 PF02911 Formyl transferase, C-terminal domain APJL_RS08160 PF00551 Formyl transferase APJL_RS08170 PF09186 Domain of unknown function (DUF1949) APJL_RS08170 PF01205 Uncharacterized protein family UPF0029 APJL_RS08175 PF02386 Cation transport protein APJL_RS08180 PF12724 Flavodoxin domain APJL_RS08185 PF01741 Large-conductance mechanosensitive channel, MscL APJL_RS08190 PF04055 Radical SAM superfamily APJL_RS08195 PF03099 Biotin/lipoate A/B protein ligase family APJL_RS08200 PF04359 Protein of unknown function (DUF493) APJL_RS08205 PF00768 D-alanyl-D-alanine carboxypeptidase APJL_RS08205 PF07943 Penicillin-binding protein 5, C-terminal domain APJL_RS08210 PF03330 Lytic transglycolase APJL_RS08215 PF01098 Cell cycle protein APJL_RS08220 PF03717 Penicillin-binding Protein dimerisation domain APJL_RS08220 PF00905 Penicillin binding protein transpeptidase domain APJL_RS08225 PF02590 Predicted SPOUT methyltransferase APJL_RS08235 PF01624 MutS domain I APJL_RS08235 PF05188 MutS domain II APJL_RS08235 PF05192 MutS domain III APJL_RS08235 PF05190 MutS family domain IV APJL_RS08235 PF00488 MutS domain V APJL_RS08240 PF00005 ABC transporter APJL_RS08245 PF00528 Binding-protein-dependent transport system inner membrane component APJL_RS08250 PF03313 Serine dehydratase alpha chain APJL_RS08255 PF04405 Domain of Unknown function (DUF542) APJL_RS08255 PF01814 Hemerythrin HHE cation binding domain APJL_RS08260 PF00893 Small Multidrug Resistance protein APJL_RS08265 PF04175 Protein of unknown function (DUF406) APJL_RS08280 PF01774 UreD urease accessory protein APJL_RS08285 PF02492 CobW/HypB/UreG, nucleotide-binding domain APJL_RS08290 PF01730 UreF APJL_RS08295 PF05194 UreE urease accessory protein, C-terminal domain APJL_RS08295 PF02814 UreE urease accessory protein, N-terminal domain APJL_RS08305 PF01979 Amidohydrolase family APJL_RS08305 PF00449 Urease alpha-subunit, N-terminal domain APJL_RS08310 PF00699 Urease beta subunit APJL_RS08315 PF00547 Urease, gamma subunit APJL_RS08325 PF00005 ABC transporter APJL_RS08335 PF01891 Cobalt uptake substrate-specific transmembrane region APJL_RS08345 PF10670 Domain of unknown function (DUF4198) APJL_RS08350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APJL_RS08350 PF03466 LysR substrate binding domain APJL_RS08360 PF03600 Citrate transporter APJL_RS08360 PF02080 TrkA-C domain APJL_RS08365 PF05068 Mannitol repressor APJL_RS08370 PF01232 Mannitol dehydrogenase Rossmann domain APJL_RS08370 PF08125 Mannitol dehydrogenase C-terminal domain APJL_RS08375 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 APJL_RS08375 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit APJL_RS08375 PF02378 Phosphotransferase system, EIIC APJL_RS08380 PF01380 SIS domain APJL_RS08385 PF00455 DeoR C terminal sensor domain APJL_RS08385 PF08220 DeoR-like helix-turn-helix domain APJL_RS08400 PF18071 HMW1C N-terminal APJL_RS08400 PF18254 HMW1 domain 2 APJL_RS08405 PF18693 TRAM domain APJL_RS08405 PF04055 Radical SAM superfamily APJL_RS08405 PF00919 Uncharacterized protein family UPF0004 APJL_RS08410 PF01048 Phosphorylase superfamily APJL_RS08420 PF04102 SlyX APJL_RS08425 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase APJL_RS08425 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase APJL_RS08430 PF08348 YheO-like PAS domain APJL_RS08430 PF13309 HTH domain APJL_RS08435 PF02635 DsrE/DsrF-like family APJL_RS08440 PF02635 DsrE/DsrF-like family APJL_RS08445 PF04077 DsrH like protein APJL_RS08475 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain APJL_RS08480 PF02874 ATP synthase alpha/beta family, beta-barrel domain APJL_RS08480 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain APJL_RS08485 PF00231 ATP synthase APJL_RS08490 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain APJL_RS08490 PF00306 ATP synthase alpha/beta chain, C terminal domain APJL_RS08490 PF02874 ATP synthase alpha/beta family, beta-barrel domain APJL_RS08495 PF00213 ATP synthase delta (OSCP) subunit APJL_RS08500 PF00430 ATP synthase B/B' CF(0) APJL_RS08505 PF00137 ATP synthase subunit C APJL_RS08510 PF00119 ATP synthase A chain APJL_RS08520 PF02527 rRNA small subunit methyltransferase G APJL_RS08525 PF01134 Glucose inhibited division protein A APJL_RS08525 PF13932 GidA associated domain APJL_RS08535 PF00497 Bacterial extracellular solute-binding proteins, family 3 APJL_RS08540 PF02810 SEC-C motif APJL_RS08550 PF03613 PTS system mannose/fructose/sorbose family IID component APJL_RS08555 PF03609 PTS system sorbose-specific iic component APJL_RS08560 PF03830 PTS system sorbose subfamily IIB component APJL_RS08560 PF03610 PTS system fructose IIA component APJL_RS08565 PF02447 GntP family permease APJL_RS08570 PF01202 Shikimate kinase APJL_RS08575 PF00356 Bacterial regulatory proteins, lacI family APJL_RS08575 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family APJL_RS08580 PF00356 Bacterial regulatory proteins, lacI family APJL_RS08585 PF05025 RbsD / FucU transport protein family APJL_RS08590 PF00005 ABC transporter APJL_RS08595 PF02653 Branched-chain amino acid transport system / permease component APJL_RS08600 PF13407 Periplasmic binding protein domain APJL_RS08605 PF00294 pfkB family carbohydrate kinase APJL_RS08610 PF00384 Molybdopterin oxidoreductase APJL_RS08610 PF01568 Molydopterin dinucleotide binding domain APJL_RS08610 PF04879 Molybdopterin oxidoreductase Fe4S4 domain APJL_RS08615 PF12800 4Fe-4S binding domain APJL_RS08615 PF13247 4Fe-4S dicluster domain APJL_RS08620 PF04976 DMSO reductase anchor subunit (DmsC) APJL_RS08625 PF02613 Nitrate reductase delta subunit APJL_RS08630 PF12838 4Fe-4S dicluster domain APJL_RS08630 PF00037 4Fe-4S binding domain APJL_RS08655 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain APJL_RS08655 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal APJL_RS08655 PF02769 AIR synthase related protein, C-terminal domain APJL_RS08660 PF00455 DeoR C terminal sensor domain APJL_RS08660 PF08220 DeoR-like helix-turn-helix domain APJL_RS08665 PF02952 L-fucose isomerase, C-terminal domain APJL_RS08665 PF07882 L-fucose isomerase, second N-terminal domain APJL_RS08665 PF07881 L-fucose isomerase, first N-terminal domain APJL_RS08670 PF02782 FGGY family of carbohydrate kinases, C-terminal domain APJL_RS08670 PF00370 FGGY family of carbohydrate kinases, N-terminal domain APJL_RS08675 PF05025 RbsD / FucU transport protein family APJL_RS08680 PF00596 Class II Aldolase and Adducin N-terminal domain APJL_RS08685 PF07690 Major Facilitator Superfamily APJL_RS08690 PF00465 Iron-containing alcohol dehydrogenase APJL_RS08695 PF07274 Protein of unknown function (DUF1440) APJL_RS08700 PF00528 Binding-protein-dependent transport system inner membrane component APJL_RS08705 PF00528 Binding-protein-dependent transport system inner membrane component APJL_RS08710 PF00005 ABC transporter APJL_RS08715 PF00497 Bacterial extracellular solute-binding proteins, family 3 APJL_RS08720 PF05159 Capsule polysaccharide biosynthesis protein APJL_RS08725 PF05159 Capsule polysaccharide biosynthesis protein APJL_RS08735 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family APJL_RS08740 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 APJL_RS08745 PF03611 PTS system sugar-specific permease component APJL_RS08755 PF08220 DeoR-like helix-turn-helix domain APJL_RS08755 PF00455 DeoR C terminal sensor domain APJL_RS08760 PF01261 Xylose isomerase-like TIM barrel APJL_RS08765 PF00596 Class II Aldolase and Adducin N-terminal domain APJL_RS08790 PF04575 Protein of unknown function (DUF560) APJL_RS08795 PF01370 NAD dependent epimerase/dehydratase family APJL_RS08800 PF01327 Polypeptide deformylase APJL_RS08805 PF02481 DNA recombination-mediator protein A APJL_RS08805 PF17782 DprA winged helix domain APJL_RS08810 PF03169 OPT oligopeptide transporter protein APJL_RS08815 PF03611 PTS system sugar-specific permease component APJL_RS08825 PF00584 SecE/Sec61-gamma subunits of protein translocation complex APJL_RS08830 PF02357 Transcription termination factor nusG APJL_RS08830 PF00467 KOW motif APJL_RS08835 PF00298 Ribosomal protein L11, RNA binding domain APJL_RS08835 PF03946 Ribosomal protein L11, N-terminal domain APJL_RS08840 PF00687 Ribosomal protein L1p/L10e family APJL_RS08850 PF16320 Ribosomal protein L7/L12 dimerisation domain APJL_RS08850 PF00542 Ribosomal protein L7/L12 C-terminal domain APJL_RS08885 PF04565 RNA polymerase Rpb2, domain 3 APJL_RS08885 PF00562 RNA polymerase Rpb2, domain 6 APJL_RS08885 PF04561 RNA polymerase Rpb2, domain 2 APJL_RS08885 PF04560 RNA polymerase Rpb2, domain 7 APJL_RS08885 PF10385 RNA polymerase beta subunit external 1 domain APJL_RS08885 PF04563 RNA polymerase beta subunit APJL_RS08890 PF04983 RNA polymerase Rpb1, domain 3 APJL_RS08890 PF00623 RNA polymerase Rpb1, domain 2 APJL_RS08890 PF04997 RNA polymerase Rpb1, domain 1 APJL_RS08890 PF05000 RNA polymerase Rpb1, domain 4 APJL_RS08890 PF04998 RNA polymerase Rpb1, domain 5 APJL_RS08905 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin APJL_RS08910 PF01850 PIN domain APJL_RS08930 PF10431 C-terminal, D2-small domain, of ClpB protein APJL_RS08930 PF07724 AAA domain (Cdc48 subfamily) APJL_RS08930 PF00004 ATPase family associated with various cellular activities (AAA) APJL_RS08935 PF00227 Proteasome subunit APJL_RS08940 PF17746 SfsA N-terminal OB domain APJL_RS08940 PF03749 Sugar fermentation stimulation protein RE domain APJL_RS08945 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily APJL_RS08950 PF14815 NUDIX domain APJL_RS08950 PF00730 HhH-GPD superfamily base excision DNA repair protein APJL_RS08955 PF04362 Bacterial Fe(2+) trafficking APJL_RS08960 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain APJL_RS08960 PF01464 Transglycosylase SLT domain APJL_RS08985 PF00448 SRP54-type protein, GTPase domain APJL_RS08985 PF02881 SRP54-type protein, helical bundle domain APJL_RS08985 PF02978 Signal peptide binding domain APJL_RS08990 PF00149 Calcineurin-like phosphoesterase APJL_RS08990 PF02872 5'-nucleotidase, C-terminal domain APJL_RS08995 PF01494 FAD binding domain APJL_RS09000 PF01381 Helix-turn-helix APJL_RS09005 PF13335 Magnesium chelatase, subunit ChlI C-terminal APJL_RS09005 PF01078 Magnesium chelatase, subunit ChlI APJL_RS09015 PF00561 alpha/beta hydrolase fold APJL_RS09020 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain APJL_RS09020 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain APJL_RS09020 PF16582 Middle domain of thiamine pyrophosphate APJL_RS09025 PF13472 GDSL-like Lipase/Acylhydrolase family APJL_RS09025 PF02348 Cytidylyltransferase APJL_RS09030 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase APJL_RS09035 PF00480 ROK family APJL_RS09040 PF00701 Dihydrodipicolinate synthetase family APJL_RS09045 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase APJL_RS09050 PF01979 Amidohydrolase family APJL_RS09055 PF10415 Fumarase C C-terminus APJL_RS09055 PF00206 Lyase APJL_RS09065 PF00338 Ribosomal protein S10p/S20e APJL_RS09070 PF00297 Ribosomal protein L3 APJL_RS09075 PF00573 Ribosomal protein L4/L1 family APJL_RS09080 PF00276 Ribosomal protein L23 APJL_RS09085 PF00181 Ribosomal Proteins L2, RNA binding domain APJL_RS09085 PF03947 Ribosomal Proteins L2, C-terminal domain APJL_RS09090 PF00203 Ribosomal protein S19 APJL_RS09095 PF00237 Ribosomal protein L22p/L17e APJL_RS09100 PF00189 Ribosomal protein S3, C-terminal domain APJL_RS09100 PF07650 KH domain APJL_RS09105 PF00252 Ribosomal protein L16p/L10e APJL_RS09110 PF00831 Ribosomal L29 protein APJL_RS09115 PF00366 Ribosomal protein S17 APJL_RS09120 PF00238 Ribosomal protein L14p/L23e APJL_RS09125 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 APJL_RS09130 PF00673 ribosomal L5P family C-terminus APJL_RS09130 PF00281 Ribosomal protein L5 APJL_RS09135 PF00253 Ribosomal protein S14p/S29e APJL_RS09140 PF00410 Ribosomal protein S8 APJL_RS09145 PF00347 Ribosomal protein L6 APJL_RS09150 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast APJL_RS09155 PF00333 Ribosomal protein S5, N-terminal domain APJL_RS09155 PF03719 Ribosomal protein S5, C-terminal domain APJL_RS09160 PF00327 Ribosomal protein L30p/L7e APJL_RS09165 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A APJL_RS09170 PF00344 SecY translocase APJL_RS09175 PF00444 Ribosomal protein L36 APJL_RS09180 PF00416 Ribosomal protein S13/S18 APJL_RS09185 PF00411 Ribosomal protein S11 APJL_RS09190 PF00163 Ribosomal protein S4/S9 N-terminal domain APJL_RS09190 PF01479 S4 domain APJL_RS09195 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain APJL_RS09195 PF01000 RNA polymerase Rpb3/RpoA insert domain APJL_RS09195 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain APJL_RS09200 PF01196 Ribosomal protein L17 APJL_RS09205 PF00886 Ribosomal protein S16 APJL_RS09210 PF01782 RimM N-terminal domain APJL_RS09210 PF05239 PRC-barrel domain APJL_RS09215 PF01746 tRNA (Guanine-1)-methyltransferase APJL_RS09220 PF01245 Ribosomal protein L19 APJL_RS09225 PF08007 Cupin superfamily protein APJL_RS09230 PF01497 Periplasmic binding protein APJL_RS09235 PF01032 FecCD transport family APJL_RS09240 PF00005 ABC transporter APJL_RS09245 PF00127 Copper binding proteins, plastocyanin/azurin family APJL_RS09260 PF02613 Nitrate reductase delta subunit APJL_RS09265 PF00384 Molybdopterin oxidoreductase APJL_RS09265 PF18364 Molybdopterin oxidoreductase N-terminal domain APJL_RS09265 PF01568 Molydopterin dinucleotide binding domain APJL_RS09275 PF02091 Glycyl-tRNA synthetase alpha subunit APJL_RS09280 PF04480 Protein of unknown function (DUF559) APJL_RS09290 PF05746 DALR anticodon binding domain APJL_RS09290 PF02092 Glycyl-tRNA synthetase beta subunit APJL_RS09295 PF17347 Family of unknown function (DUF5377) APJL_RS09300 PF02899 Phage integrase, N-terminal SAM-like domain APJL_RS09300 PF00589 Phage integrase family APJL_RS09305 PF04304 Protein of unknown function (DUF454) APJL_RS09315 PF00149 Calcineurin-like phosphoesterase APJL_RS09320 PF07509 Protein of unknown function (DUF1523) APJL_RS09325 PF01026 TatD related DNase APJL_RS09335 PF00005 ABC transporter APJL_RS09335 PF02687 FtsX-like permease family APJL_RS09335 PF12704 MacB-like periplasmic core domain APJL_RS09340 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion APJL_RS09345 PF06629 MltA-interacting protein MipA APJL_RS09350 PF09115 DNA polymerase III, delta subunit, C terminal APJL_RS09355 PF02223 Thymidylate kinase APJL_RS09360 PF02618 YceG-like family APJL_RS09380 PF00550 Phosphopantetheine attachment site APJL_RS09385 PF00834 Ribulose-phosphate 3 epimerase family APJL_RS09390 PF01197 Ribosomal protein L31 APJL_RS09395 PF00444 Ribosomal protein L36 APJL_RS09400 PF00912 Transglycosylase APJL_RS09400 PF14814 Bifunctional transglycosylase second domain APJL_RS09400 PF00905 Penicillin binding protein transpeptidase domain APJL_RS09405 PF00378 Enoyl-CoA hydratase/isomerase APJL_RS09410 PF13291 ACT domain APJL_RS09410 PF02824 TGS domain APJL_RS09410 PF04607 Region found in RelA / SpoT proteins APJL_RS09415 PF01192 RNA polymerase Rpb6 APJL_RS09420 PF00270 DEAD/DEAH box helicase APJL_RS09420 PF00271 Helicase conserved C-terminal domain APJL_RS09420 PF17191 RecG wedge domain APJL_RS09435 PF04073 Aminoacyl-tRNA editing domain APJL_RS09435 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) APJL_RS09435 PF03129 Anticodon binding domain APJL_RS09445 PF04542 Sigma-70 region 2 APJL_RS09445 PF08281 Sigma-70, region 4 APJL_RS09450 PF00174 Oxidoreductase molybdopterin binding domain APJL_RS09455 PF01794 Ferric reductase like transmembrane component APJL_RS09460 PF04545 Sigma-70, region 4 APJL_RS09460 PF00140 Sigma-70 factor, region 1.2 APJL_RS09460 PF04542 Sigma-70 region 2 APJL_RS09465 PF07690 Major Facilitator Superfamily APJL_RS09480 PF03590 Aspartate-ammonia ligase APJL_RS09485 PF13404 AsnC-type helix-turn-helix domain APJL_RS09485 PF01037 Lrp/AsnC ligand binding domain APJL_RS09490 PF01048 Phosphorylase superfamily APJL_RS09495 PF04345 Chorismate lyase APJL_RS09500 PF01177 Asp/Glu/Hydantoin racemase APJL_RS09530 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain APJL_RS09530 PF01077 Nitrite and sulphite reductase 4Fe-4S domain APJL_RS09535 PF00175 Oxidoreductase NAD-binding domain APJL_RS09535 PF00258 Flavodoxin APJL_RS09535 PF00667 FAD binding domain APJL_RS09540 PF00009 Elongation factor Tu GTP binding domain APJL_RS09545 PF01507 Phosphoadenosine phosphosulfate reductase family APJL_RS09550 PF01507 Phosphoadenosine phosphosulfate reductase family APJL_RS09555 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases APJL_RS09555 PF14824 Sirohaem biosynthesis protein central APJL_RS09555 PF10414 Sirohaem synthase dimerisation region APJL_RS09565 PF00528 Binding-protein-dependent transport system inner membrane component APJL_RS09570 PF00528 Binding-protein-dependent transport system inner membrane component APJL_RS09575 PF12857 TOBE-like domain APJL_RS09575 PF17850 CysA C-terminal regulatory domain APJL_RS09575 PF00005 ABC transporter APJL_RS09580 PF01070 FMN-dependent dehydrogenase APJL_RS09585 PF08279 HTH domain APJL_RS09585 PF02237 Biotin protein ligase C terminal domain APJL_RS09585 PF03099 Biotin/lipoate A/B protein ligase family APJL_RS09590 PF01565 FAD binding domain APJL_RS09590 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain APJL_RS09595 PF01389 OmpA-like transmembrane domain APJL_RS09595 PF00691 OmpA family APJL_RS09605 PF13333 Integrase core domain APJL_RS09605 PF00665 Integrase core domain APJL_RS09610 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain APJL_RS09610 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain APJL_RS09615 PF04403 Paraquat-inducible protein A APJL_RS09620 PF01841 Transglutaminase-like superfamily APJL_RS09630 PF00403 Heavy-metal-associated domain APJL_RS09635 PF00465 Iron-containing alcohol dehydrogenase APJL_RS09640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APJL_RS09640 PF03466 LysR substrate binding domain APJL_RS09645 PF14602 Hexapeptide repeat of succinyl-transferase APJL_RS09645 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal APJL_RS09645 PF00132 Bacterial transferase hexapeptide (six repeats) APJL_RS09650 PF01220 Dehydroquinase class II APJL_RS09655 PF04488 Glycosyltransferase sugar-binding region containing DXD motif APJL_RS09660 PF00364 Biotin-requiring enzyme APJL_RS09665 PF02785 Biotin carboxylase C-terminal domain APJL_RS09665 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain APJL_RS09665 PF00289 Biotin carboxylase, N-terminal domain APJL_RS09670 PF12804 MobA-like NTP transferase domain APJL_RS09675 PF06288 Protein of unknown function (DUF1040) APJL_RS09680 PF01323 DSBA-like thioredoxin domain APJL_RS09690 PF05036 Sporulation related domain APJL_RS09690 PF05036 Sporulation related domain APJL_RS09695 PF04445 Putative SAM-dependent methyltransferase APJL_RS09700 PF02557 D-alanyl-D-alanine carboxypeptidase APJL_RS09705 PF01546 Peptidase family M20/M25/M40 APJL_RS09705 PF07687 Peptidase dimerisation domain APJL_RS09710 PF03960 ArsC family APJL_RS09720 PF00809 Pterin binding enzyme APJL_RS09725 PF00849 RNA pseudouridylate synthase APJL_RS09725 PF01479 S4 domain APJL_RS09735 PF05552 Conserved TM helix APJL_RS09735 PF00924 Mechanosensitive ion channel APJL_RS09740 PF02785 Biotin carboxylase C-terminal domain APJL_RS09740 PF00289 Biotin carboxylase, N-terminal domain APJL_RS09740 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain APJL_RS09750 PF00675 Insulinase (Peptidase family M16) APJL_RS09750 PF16187 Middle or third domain of peptidase_M16 APJL_RS09750 PF05193 Peptidase M16 inactive domain APJL_RS09755 PF17946 RecC C-terminal domain APJL_RS09780 PF07977 FabA-like domain APJL_RS09785 PF05362 Lon protease (S16) C-terminal proteolytic domain APJL_RS09785 PF13654 AAA domain APJL_RS09790 PF17414 MatP C-terminal ribbon-helix-helix domain APJL_RS09790 PF06303 MatP N-terminal domain APJL_RS09795 PF00579 tRNA synthetases class I (W and Y) APJL_RS09800 PF13419 Haloacid dehalogenase-like hydrolase APJL_RS09810 PF01790 Prolipoprotein diacylglyceryl transferase APJL_RS09815 PF01925 Sulfite exporter TauE/SafE APJL_RS09820 PF00293 NUDIX domain APJL_RS09830 PF00719 Inorganic pyrophosphatase APJL_RS09840 PF03737 Aldolase/RraA APJL_RS09845 PF01226 Formate/nitrite transporter APJL_RS09855 PF13333 Integrase core domain APJL_RS09855 PF00665 Integrase core domain APJL_RS09870 PF00684 DnaJ central domain APJL_RS09870 PF01556 DnaJ C terminal domain APJL_RS09870 PF00226 DnaJ domain APJL_RS09875 PF00012 Hsp70 protein APJL_RS09880 PF00370 FGGY family of carbohydrate kinases, N-terminal domain APJL_RS09880 PF02782 FGGY family of carbohydrate kinases, C-terminal domain APJL_RS09890 PF13407 Periplasmic binding protein domain APJL_RS09895 PF00005 ABC transporter APJL_RS09900 PF02653 Branched-chain amino acid transport system / permease component APJL_RS09905 PF12833 Helix-turn-helix domain APJL_RS09910 PF01431 Peptidase family M13 APJL_RS09910 PF05649 Peptidase family M13 APJL_RS09915 PF10571 Uncharacterised protein family UPF0547 APJL_RS09920 PF00474 Sodium:solute symporter family APJL_RS09925 PF06196 Protein of unknown function (DUF997) APJL_RS09930 PF01340 Met Apo-repressor, MetJ APJL_RS09935 PF04333 MlaA lipoprotein APJL_RS09940 PF01263 Aldose 1-epimerase APJL_RS09955 PF01522 Polysaccharide deacetylase APJL_RS09955 PF14883 Hypothetical glycosyl hydrolase family 13 APJL_RS09960 PF00535 Glycosyl transferase family 2 APJL_RS09970 PF00121 Triosephosphate isomerase APJL_RS09975 PF01142 tRNA pseudouridine synthase D (TruD) APJL_RS09980 PF01975 Survival protein SurE APJL_RS09985 PF09335 SNARE associated Golgi protein APJL_RS10000 PF01476 LysM domain APJL_RS10000 PF01551 Peptidase family M23 APJL_RS10005 PF03352 Methyladenine glycosylase APJL_RS10015 PF07670 Nucleoside recognition APJL_RS10020 PF07670 Nucleoside recognition APJL_RS10025 PF00762 Ferrochelatase APJL_RS10030 PF00468 Ribosomal protein L34 APJL_RS10035 PF00825 Ribonuclease P APJL_RS10040 PF01809 Putative membrane protein insertion efficiency factor APJL_RS10045 PF03951 Glutamine synthetase, beta-Grasp domain APJL_RS10045 PF00120 Glutamine synthetase, catalytic domain APJL_RS10050 PF00149 Calcineurin-like phosphoesterase APJL_RS10055 PF00293 NUDIX domain APJL_RS10060 PF06146 Phosphate-starvation-inducible E APJL_RS10065 PF01648 4'-phosphopantetheinyl transferase superfamily APJL_RS10070 PF00892 EamA-like transporter family APJL_RS10075 PF06965 Na+/H+ antiporter 1 APJL_RS10085 PF02580 D-Tyr-tRNA(Tyr) deacylase APJL_RS10090 PF03631 Virulence factor BrkB APJL_RS10095 PF00171 Aldehyde dehydrogenase family APJL_RS10125 PF01119 DNA mismatch repair protein, C-terminal domain APJL_RS10125 PF08676 MutL C terminal dimerisation domain APJL_RS10130 PF00107 Zinc-binding dehydrogenase APJL_RS10130 PF08240 Alcohol dehydrogenase GroES-like domain APJL_RS10140 PF17209 Hfq protein APJL_RS10145 PF13167 GTP-binding GTPase N-terminal APJL_RS10145 PF16360 GTP-binding GTPase Middle Region APJL_RS10145 PF01926 50S ribosome-binding GTPase APJL_RS10150 PF03641 Possible lysine decarboxylase APJL_RS10155 PF03819 MazG nucleotide pyrophosphohydrolase domain APJL_RS10160 PF13545 Crp-like helix-turn-helix domain APJL_RS10160 PF00027 Cyclic nucleotide-binding domain APJL_RS10165 PF06794 Uncharacterised protein family (UPF0270) APJL_RS10170 PF00440 Bacterial regulatory proteins, tetR family APJL_RS10175 PF00692 dUTPase APJL_RS10180 PF02441 Flavoprotein APJL_RS10180 PF04127 DNA / pantothenate metabolism flavoprotein APJL_RS10185 PF04002 RadC-like JAB domain APJL_RS10190 PF00830 Ribosomal L28 family APJL_RS10195 PF00471 Ribosomal protein L33 APJL_RS10210 PF00202 Aminotransferase class-III APJL_RS10215 PF00282 Pyridoxal-dependent decarboxylase conserved domain APJL_RS10220 PF01206 Sulfurtransferase TusA APJL_RS10225 PF04143 Sulphur transport APJL_RS10230 PF04219 Protein of unknown function, DUF APJL_RS10235 PF05958 tRNA (Uracil-5-)-methyltransferase APJL_RS10250 PF01544 CorA-like Mg2+ transporter protein APJL_RS10255 PF01209 ubiE/COQ5 methyltransferase family APJL_RS10265 PF03109 ABC1 family APJL_RS10270 PF02416 mttA/Hcf106 family APJL_RS10280 PF00902 Sec-independent protein translocase protein (TatC) APJL_RS10285 PF00490 Delta-aminolevulinic acid dehydratase APJL_RS10295 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain APJL_RS10295 PF06827 Zinc finger found in FPG and IleRS APJL_RS10295 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain APJL_RS10300 PF05525 Branched-chain amino acid transport protein APJL_RS10310 PF00698 Acyl transferase domain APJL_RS10315 PF02677 Epoxyqueuosine reductase QueH APJL_RS10320 PF00348 Polyprenyl synthetase APJL_RS10330 PF03358 NADPH-dependent FMN reductase APJL_RS10335 PF07681 DoxX APJL_RS10340 PF00829 Ribosomal prokaryotic L21 protein APJL_RS10345 PF01016 Ribosomal L27 protein APJL_RS10350 PF00892 EamA-like transporter family APJL_RS10355 PF04575 Protein of unknown function (DUF560) APJL_RS10360 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD APJL_RS10365 PF00156 Phosphoribosyl transferase domain APJL_RS10370 PF08468 Methyltransferase small domain N-terminal APJL_RS10370 PF05175 Methyltransferase small domain APJL_RS10380 PF00583 Acetyltransferase (GNAT) family APJL_RS10385 PF00271 Helicase conserved C-terminal domain APJL_RS10385 PF00270 DEAD/DEAH box helicase APJL_RS10390 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region APJL_RS10390 PF01243 Pyridoxamine 5'-phosphate oxidase APJL_RS10395 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APJL_RS10400 PF00171 Aldehyde dehydrogenase family APJL_RS10405 PF01184 GPR1/FUN34/yaaH family APJL_RS10410 PF00005 ABC transporter APJL_RS10415 PF01497 Periplasmic binding protein APJL_RS10420 PF01032 FecCD transport family APJL_RS10425 PF07715 TonB-dependent Receptor Plug Domain APJL_RS10425 PF00593 TonB dependent receptor APJL_RS10435 PF01259 SAICAR synthetase APJL_RS10440 PF08029 HisG, C-terminal domain APJL_RS10440 PF01634 ATP phosphoribosyltransferase APJL_RS10445 PF00815 Histidinol dehydrogenase APJL_RS10450 PF00155 Aminotransferase class I and II APJL_RS10460 PF00475 Imidazoleglycerol-phosphate dehydratase APJL_RS10470 PF00117 Glutamine amidotransferase class-I APJL_RS10475 PF00977 Histidine biosynthesis protein APJL_RS10480 PF00977 Histidine biosynthesis protein APJL_RS10485 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase APJL_RS10485 PF01502 Phosphoribosyl-AMP cyclohydrolase APJL_RS10490 PF02592 Putative vitamin uptake transporter APJL_RS10495 PF00557 Metallopeptidase family M24 APJL_RS10510 PF00356 Bacterial regulatory proteins, lacI family APJL_RS10510 PF13407 Periplasmic binding protein domain APJL_RS10515 PF08244 Glycosyl hydrolases family 32 C terminal APJL_RS10515 PF00251 Glycosyl hydrolases family 32 N-terminal domain APJL_RS10520 PF00294 pfkB family carbohydrate kinase APJL_RS10525 PF07732 Multicopper oxidase APJL_RS10530 PF02687 FtsX-like permease family APJL_RS10530 PF12704 MacB-like periplasmic core domain APJL_RS10535 PF00005 ABC transporter APJL_RS10540 PF02687 FtsX-like permease family APJL_RS10540 PF12704 MacB-like periplasmic core domain APJL_RS10545 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain APJL_RS10545 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain APJL_RS10550 PF00793 DAHP synthetase I family APJL_RS10555 PF13369 Transglutaminase-like superfamily APJL_RS10560 PF17827 PrmC N-terminal domain APJL_RS10560 PF13847 Methyltransferase domain APJL_RS10570 PF00472 RF-1 domain APJL_RS10570 PF03462 PCRF domain APJL_RS10575 PF00581 Rhodanese-like domain APJL_RS10580 PF04143 Sulphur transport APJL_RS10590 PF05658 Head domain of trimeric autotransporter adhesin APJL_RS10590 PF05662 Coiled stalk of trimeric autotransporter adhesin APJL_RS10590 PF03895 YadA-like membrane anchor domain APJL_RS10595 PF05662 Coiled stalk of trimeric autotransporter adhesin APJL_RS10595 PF03895 YadA-like membrane anchor domain APJL_RS10595 PF05658 Head domain of trimeric autotransporter adhesin