APL_RS00020	PWY-6854	ethylene biosynthesis III (microbes)
APL_RS00025	PWY-2941	L-lysine biosynthesis II
APL_RS00025	PWY-2942	L-lysine biosynthesis III
APL_RS00025	PWY-5097	L-lysine biosynthesis VI
APL_RS00025	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
APL_RS00025	PWY-6559	spermidine biosynthesis II
APL_RS00025	PWY-6562	norspermidine biosynthesis
APL_RS00025	PWY-7153	grixazone biosynthesis
APL_RS00025	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
APL_RS00035	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
APL_RS00035	PWY-622	starch biosynthesis
APL_RS00050	PWY-2201	folate transformations I
APL_RS00070	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
APL_RS00070	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
APL_RS00075	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
APL_RS00075	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
APL_RS00075	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
APL_RS00080	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
APL_RS00080	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
APL_RS00090	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
APL_RS00090	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
APL_RS00090	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
APL_RS00090	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
APL_RS00095	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
APL_RS00095	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
APL_RS00100	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
APL_RS00100	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
APL_RS00120	PWY-2201	folate transformations I
APL_RS00120	PWY-5497	purine nucleobases degradation II (anaerobic)
APL_RS00165	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
APL_RS00175	PWY-6825	phosphatidylcholine biosynthesis V
APL_RS00215	PWY-5269	cardiolipin biosynthesis II
APL_RS00215	PWY-5668	cardiolipin biosynthesis I
APL_RS00225	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
APL_RS00225	PWY-6167	flavin biosynthesis II (archaea)
APL_RS00225	PWY-6168	flavin biosynthesis III (fungi)
APL_RS00255	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
APL_RS00255	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
APL_RS00260	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
APL_RS00300	PWY-6825	phosphatidylcholine biosynthesis V
APL_RS00305	PWY-6004	glycine betaine biosynthesis V (from glycine)
APL_RS00310	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
APL_RS00310	PWY-5723	Rubisco shunt
APL_RS00385	PWY-5057	L-valine degradation II
APL_RS00385	PWY-5076	L-leucine degradation III
APL_RS00385	PWY-5078	L-isoleucine degradation II
APL_RS00385	PWY-5101	L-isoleucine biosynthesis II
APL_RS00385	PWY-5103	L-isoleucine biosynthesis III
APL_RS00385	PWY-5104	L-isoleucine biosynthesis IV
APL_RS00385	PWY-5108	L-isoleucine biosynthesis V
APL_RS00420	PWY-5350	thiosulfate disproportionation III (rhodanese)
APL_RS00450	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
APL_RS00460	PWY-5381	pyridine nucleotide cycling (plants)
APL_RS00510	PWY-5101	L-isoleucine biosynthesis II
APL_RS00510	PWY-5103	L-isoleucine biosynthesis III
APL_RS00510	PWY-5104	L-isoleucine biosynthesis IV
APL_RS00510	PWY-7111	pyruvate fermentation to isobutanol (engineered)
APL_RS00520	PWY-5101	L-isoleucine biosynthesis II
APL_RS00520	PWY-5103	L-isoleucine biosynthesis III
APL_RS00520	PWY-5104	L-isoleucine biosynthesis IV
APL_RS00520	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
APL_RS00520	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
APL_RS00520	PWY-6389	(<i>S</i>)-acetoin biosynthesis
APL_RS00520	PWY-7111	pyruvate fermentation to isobutanol (engineered)
APL_RS00525	PWY-5674	nitrate reduction IV (dissimilatory)
APL_RS00555	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
APL_RS00555	PWY-6853	ethylene biosynthesis II (microbes)
APL_RS00555	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
APL_RS00585	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
APL_RS00585	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
APL_RS00600	PWY-3841	folate transformations II
APL_RS00600	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
APL_RS00600	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
APL_RS00600	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
APL_RS00600	PWY-7199	pyrimidine deoxyribonucleosides salvage
APL_RS00600	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
APL_RS00610	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
APL_RS00705	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
APL_RS00705	PWY-7177	UTP and CTP dephosphorylation II
APL_RS00705	PWY-7185	UTP and CTP dephosphorylation I
APL_RS00760	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
APL_RS00760	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
APL_RS00760	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
APL_RS00760	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
APL_RS00760	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
APL_RS00760	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
APL_RS00760	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
APL_RS00760	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
APL_RS00765	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
APL_RS00765	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
APL_RS00765	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
APL_RS00765	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
APL_RS00765	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
APL_RS00765	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
APL_RS00765	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
APL_RS00765	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
APL_RS00825	PWY-3341	L-proline biosynthesis III
APL_RS00825	PWY-4981	L-proline biosynthesis II (from arginine)
APL_RS00825	PWY-6344	L-ornithine degradation II (Stickland reaction)
APL_RS00840	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
APL_RS00840	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
APL_RS00840	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
APL_RS00910	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
APL_RS00910	PWY-6148	tetrahydromethanopterin biosynthesis
APL_RS00910	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
APL_RS00910	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
APL_RS00930	PWY-5386	methylglyoxal degradation I
APL_RS00945	PWY-3461	L-tyrosine biosynthesis II
APL_RS00945	PWY-3462	L-phenylalanine biosynthesis II
APL_RS00945	PWY-6120	L-tyrosine biosynthesis III
APL_RS00945	PWY-6627	salinosporamide A biosynthesis
APL_RS00945	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
APL_RS00945	PWY-7626	bacilysin biosynthesis
APL_RS00950	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
APL_RS00950	PWY-6164	3-dehydroquinate biosynthesis I
APL_RS00950	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
APL_RS00960	PWY-1042	glycolysis IV (plant cytosol)
APL_RS00960	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
APL_RS00960	PWY-5484	glycolysis II (from fructose 6-phosphate)
APL_RS00960	PWY-5723	Rubisco shunt
APL_RS00960	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
APL_RS00960	PWY-6886	1-butanol autotrophic biosynthesis
APL_RS00960	PWY-6901	superpathway of glucose and xylose degradation
APL_RS00960	PWY-7003	glycerol degradation to butanol
APL_RS00960	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
APL_RS00960	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
APL_RS00990	PWY-6164	3-dehydroquinate biosynthesis I
APL_RS00995	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
APL_RS01035	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
APL_RS01035	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
APL_RS01035	PWY-6896	thiamin salvage I
APL_RS01035	PWY-6897	thiamin salvage II
APL_RS01040	PWY-5269	cardiolipin biosynthesis II
APL_RS01040	PWY-5668	cardiolipin biosynthesis I
APL_RS01055	PWY-2301	<i>myo</i>-inositol biosynthesis
APL_RS01055	PWY-4702	phytate degradation I
APL_RS01055	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
APL_RS01060	PWY-6891	thiazole biosynthesis II (Bacillus)
APL_RS01060	PWY-6892	thiazole biosynthesis I (E. coli)
APL_RS01060	PWY-7560	methylerythritol phosphate pathway II
APL_RS01080	PWY-1622	formaldehyde assimilation I (serine pathway)
APL_RS01080	PWY-181	photorespiration
APL_RS01080	PWY-2161	folate polyglutamylation
APL_RS01080	PWY-2201	folate transformations I
APL_RS01080	PWY-3661	glycine betaine degradation I
APL_RS01080	PWY-3661-1	glycine betaine degradation II (mammalian)
APL_RS01080	PWY-3841	folate transformations II
APL_RS01080	PWY-5497	purine nucleobases degradation II (anaerobic)
APL_RS01085	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
APL_RS01085	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
APL_RS01085	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
APL_RS01190	PWY-2201	folate transformations I
APL_RS01235	PWY-6502	oxidized GTP and dGTP detoxification
APL_RS01240	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
APL_RS01240	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
APL_RS01245	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
APL_RS01245	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
APL_RS01265	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
APL_RS01270	PWY-6936	seleno-amino acid biosynthesis
APL_RS01275	PWY-702	L-methionine biosynthesis II
APL_RS01280	PWY-2941	L-lysine biosynthesis II
APL_RS01280	PWY-2942	L-lysine biosynthesis III
APL_RS01280	PWY-5097	L-lysine biosynthesis VI
APL_RS01280	PWY-6559	spermidine biosynthesis II
APL_RS01280	PWY-6562	norspermidine biosynthesis
APL_RS01280	PWY-7153	grixazone biosynthesis
APL_RS01285	PWY-6854	ethylene biosynthesis III (microbes)
APL_RS01290	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
APL_RS01330	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
APL_RS01380	PWY-6605	adenine and adenosine salvage II
APL_RS01380	PWY-6610	adenine and adenosine salvage IV
APL_RS01425	PWY-5269	cardiolipin biosynthesis II
APL_RS01425	PWY-5668	cardiolipin biosynthesis I
APL_RS01475	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
APL_RS01475	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
APL_RS01475	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
APL_RS01475	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
APL_RS01475	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
APL_RS01475	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
APL_RS01475	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
APL_RS01475	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
APL_RS01475	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
APL_RS01475	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
APL_RS01600	PWY-6823	molybdenum cofactor biosynthesis
APL_RS01605	PWY-6823	molybdenum cofactor biosynthesis
APL_RS01645	PWY-5686	UMP biosynthesis
APL_RS01650	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
APL_RS01650	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
APL_RS01650	PWY-6936	seleno-amino acid biosynthesis
APL_RS01650	PWY-702	L-methionine biosynthesis II
APL_RS01655	PWY-6936	seleno-amino acid biosynthesis
APL_RS01690	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
APL_RS01750	PWY-1622	formaldehyde assimilation I (serine pathway)
APL_RS01750	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
APL_RS01750	PWY-5913	TCA cycle VI (obligate autotrophs)
APL_RS01750	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
APL_RS01750	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
APL_RS01750	PWY-6549	L-glutamine biosynthesis III
APL_RS01750	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
APL_RS01750	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
APL_RS01750	PWY-7124	ethylene biosynthesis V (engineered)
APL_RS01785	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
APL_RS01785	PWY-622	starch biosynthesis
APL_RS01795	PWY-622	starch biosynthesis
APL_RS01800	PWY-622	starch biosynthesis
APL_RS01805	PWY-5941	glycogen degradation II (eukaryotic)
APL_RS01805	PWY-6731	starch degradation III
APL_RS01805	PWY-6737	starch degradation V
APL_RS01805	PWY-7238	sucrose biosynthesis II
APL_RS01810	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
APL_RS01810	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
APL_RS01810	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
APL_RS01810	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
APL_RS01810	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
APL_RS01810	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
APL_RS01810	PWY-7205	CMP phosphorylation
APL_RS01810	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
APL_RS01810	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
APL_RS01810	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
APL_RS01810	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
APL_RS01810	PWY-7224	purine deoxyribonucleosides salvage
APL_RS01810	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
APL_RS01810	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
APL_RS01820	PWY-1042	glycolysis IV (plant cytosol)
APL_RS01820	PWY-1622	formaldehyde assimilation I (serine pathway)
APL_RS01820	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
APL_RS01820	PWY-5484	glycolysis II (from fructose 6-phosphate)
APL_RS01820	PWY-5723	Rubisco shunt
APL_RS01820	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
APL_RS01820	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
APL_RS01820	PWY-6886	1-butanol autotrophic biosynthesis
APL_RS01820	PWY-6901	superpathway of glucose and xylose degradation
APL_RS01820	PWY-7003	glycerol degradation to butanol
APL_RS01820	PWY-7124	ethylene biosynthesis V (engineered)
APL_RS01820	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
APL_RS01930	PWY-4261	glycerol degradation I
APL_RS01950	PWY-4261	glycerol degradation I
APL_RS01950	PWY-6118	glycerol-3-phosphate shuttle
APL_RS01950	PWY-6952	glycerophosphodiester degradation
APL_RS01955	PWY-4261	glycerol degradation I
APL_RS01955	PWY-6118	glycerol-3-phosphate shuttle
APL_RS01955	PWY-6952	glycerophosphodiester degradation
APL_RS01965	PWY-5525	D-glucuronate degradation I
APL_RS01970	PWY-6167	flavin biosynthesis II (archaea)
APL_RS01970	PWY-6168	flavin biosynthesis III (fungi)
APL_RS01970	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
APL_RS01975	PWY-6167	flavin biosynthesis II (archaea)
APL_RS01975	PWY-6168	flavin biosynthesis III (fungi)
APL_RS01975	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
APL_RS01980	PWY-6167	flavin biosynthesis II (archaea)
APL_RS01980	PWY-6168	flavin biosynthesis III (fungi)
APL_RS02020	PWY-6871	3-methylbutanol biosynthesis
APL_RS02045	PWY-7183	pyrimidine nucleobases salvage I
APL_RS02060	PWY-7183	pyrimidine nucleobases salvage I
APL_RS02075	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
APL_RS02085	PWY-7294	xylose degradation IV
APL_RS02085	PWY-7295	L-arabinose degradation IV
APL_RS02085	PWY-7560	methylerythritol phosphate pathway II
APL_RS02095	PWY-5971	palmitate biosynthesis II (bacteria and plants)
APL_RS02095	PWY-5973	<i>cis</i>-vaccenate biosynthesis
APL_RS02095	PWY-5989	stearate biosynthesis II (bacteria and plants)
APL_RS02095	PWY-5994	palmitate biosynthesis I (animals and fungi)
APL_RS02095	PWY-6113	superpathway of mycolate biosynthesis
APL_RS02095	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
APL_RS02095	PWY-6519	8-amino-7-oxononanoate biosynthesis I
APL_RS02095	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
APL_RS02095	PWY-7663	gondoate biosynthesis (anaerobic)
APL_RS02095	PWY-7664	oleate biosynthesis IV (anaerobic)
APL_RS02095	PWYG-321	mycolate biosynthesis
APL_RS02120	PWY-5667	CDP-diacylglycerol biosynthesis I
APL_RS02120	PWY-5981	CDP-diacylglycerol biosynthesis III
APL_RS02130	PWY-5386	methylglyoxal degradation I
APL_RS02165	PWY-4983	L-citrulline-nitric oxide cycle
APL_RS02165	PWY-4984	urea cycle
APL_RS02165	PWY-5	canavanine biosynthesis
APL_RS02165	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
APL_RS02165	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
APL_RS02180	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
APL_RS02180	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
APL_RS02180	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
APL_RS02180	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
APL_RS02225	PWY-7396	butanol and isobutanol biosynthesis (engineered)
APL_RS02235	PWY-1042	glycolysis IV (plant cytosol)
APL_RS02235	PWY-5484	glycolysis II (from fructose 6-phosphate)
APL_RS02235	PWY-6901	superpathway of glucose and xylose degradation
APL_RS02235	PWY-7003	glycerol degradation to butanol
APL_RS02270	PWY-5344	L-homocysteine biosynthesis
APL_RS02320	PWY-5392	reductive TCA cycle II
APL_RS02320	PWY-5537	pyruvate fermentation to acetate V
APL_RS02320	PWY-5538	pyruvate fermentation to acetate VI
APL_RS02320	PWY-5690	TCA cycle II (plants and fungi)
APL_RS02320	PWY-5913	TCA cycle VI (obligate autotrophs)
APL_RS02320	PWY-6728	methylaspartate cycle
APL_RS02320	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
APL_RS02320	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
APL_RS02325	PWY-5392	reductive TCA cycle II
APL_RS02325	PWY-5537	pyruvate fermentation to acetate V
APL_RS02325	PWY-5538	pyruvate fermentation to acetate VI
APL_RS02325	PWY-5690	TCA cycle II (plants and fungi)
APL_RS02325	PWY-5913	TCA cycle VI (obligate autotrophs)
APL_RS02325	PWY-6728	methylaspartate cycle
APL_RS02325	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
APL_RS02325	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
APL_RS02335	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
APL_RS02340	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
APL_RS02385	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
APL_RS02395	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
APL_RS02395	PWY-2161	folate polyglutamylation
APL_RS02395	PWY-2201	folate transformations I
APL_RS02395	PWY-3841	folate transformations II
APL_RS02695	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
APL_RS02825	PWY-6892	thiazole biosynthesis I (E. coli)
APL_RS02825	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
APL_RS02830	PWY-6899	base-degraded thiamin salvage
APL_RS02830	PWY-7356	thiamin salvage IV (yeast)
APL_RS02845	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
APL_RS02845	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
APL_RS02845	PWY-6897	thiamin salvage II
APL_RS02845	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
APL_RS02845	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
APL_RS02845	PWY-7356	thiamin salvage IV (yeast)
APL_RS02845	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
APL_RS03005	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
APL_RS03010	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
APL_RS03085	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
APL_RS03085	PWY-5667	CDP-diacylglycerol biosynthesis I
APL_RS03085	PWY-6453	stigma estolide biosynthesis
APL_RS03085	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
APL_RS03085	PWY-7587	oleate biosynthesis III (cyanobacteria)
APL_RS03100	PWY-6749	CMP-legionaminate biosynthesis I
APL_RS03105	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
APL_RS03115	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
APL_RS03115	PWY-6596	adenosine nucleotides degradation I
APL_RS03115	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
APL_RS03220	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
APL_RS03250	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
APL_RS03250	PWY-6164	3-dehydroquinate biosynthesis I
APL_RS03250	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
APL_RS03255	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
APL_RS03255	PWY-5368	dimorphecolate biosynthesis
APL_RS03255	PWY-5995	linoleate biosynthesis I (plants)
APL_RS03255	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
APL_RS03255	PWY-6803	phosphatidylcholine acyl editing
APL_RS03255	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
APL_RS03255	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
APL_RS03255	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
APL_RS03255	PWY-7470	phosphatidylcholine biosynthesis VII
APL_RS03255	PWY-7618	ricinoleate biosynthesis
APL_RS03260	PWY-7199	pyrimidine deoxyribonucleosides salvage
APL_RS03270	PWY-5484	glycolysis II (from fructose 6-phosphate)
APL_RS03300	PWY-4381	fatty acid biosynthesis initiation I
APL_RS03300	PWY-5743	3-hydroxypropanoate cycle
APL_RS03300	PWY-5744	glyoxylate assimilation
APL_RS03300	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
APL_RS03300	PWY-6679	jadomycin biosynthesis
APL_RS03300	PWY-6722	candicidin biosynthesis
APL_RS03300	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
APL_RS03305	PWY-2161	folate polyglutamylation
APL_RS03370	PWY-1281	sulfoacetaldehyde degradation I
APL_RS03370	PWY-5482	pyruvate fermentation to acetate II
APL_RS03370	PWY-5485	pyruvate fermentation to acetate IV
APL_RS03370	PWY-5497	purine nucleobases degradation II (anaerobic)
APL_RS03370	PWY-6637	sulfolactate degradation II
APL_RS03375	PWY-5482	pyruvate fermentation to acetate II
APL_RS03375	PWY-5485	pyruvate fermentation to acetate IV
APL_RS03375	PWY-5497	purine nucleobases degradation II (anaerobic)
APL_RS03385	PWY-5381	pyridine nucleotide cycling (plants)
APL_RS03390	PWY-5381	pyridine nucleotide cycling (plants)
APL_RS03405	PWY-3801	sucrose degradation II (sucrose synthase)
APL_RS03405	PWY-6527	stachyose degradation
APL_RS03405	PWY-7238	sucrose biosynthesis II
APL_RS03405	PWY-7343	UDP-glucose biosynthesis
APL_RS03410	PWY-6749	CMP-legionaminate biosynthesis I
APL_RS03445	PWY-6123	inosine-5'-phosphate biosynthesis I
APL_RS03445	PWY-7234	inosine-5'-phosphate biosynthesis III
APL_RS03460	PWY-5913	TCA cycle VI (obligate autotrophs)
APL_RS03460	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
APL_RS03460	PWY-6638	sulfolactate degradation III
APL_RS03460	PWY-6642	(<i>R</i>)-cysteate degradation
APL_RS03460	PWY-6643	coenzyme M biosynthesis II
APL_RS03460	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
APL_RS03460	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
APL_RS03460	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
APL_RS03545	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
APL_RS03560	PWY-6599	guanine and guanosine salvage II
APL_RS03560	PWY-6609	adenine and adenosine salvage III
APL_RS03560	PWY-6610	adenine and adenosine salvage IV
APL_RS03560	PWY-6620	guanine and guanosine salvage
APL_RS03570	PWY-2941	L-lysine biosynthesis II
APL_RS03570	PWY-2942	L-lysine biosynthesis III
APL_RS03570	PWY-5097	L-lysine biosynthesis VI
APL_RS03585	PWY-6454	vancomycin resistance I
APL_RS03585	PWY-6901	superpathway of glucose and xylose degradation
APL_RS03600	PWY-6823	molybdenum cofactor biosynthesis
APL_RS03615	PWY-6823	molybdenum cofactor biosynthesis
APL_RS03640	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
APL_RS03645	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
APL_RS03655	PWY-5344	L-homocysteine biosynthesis
APL_RS03655	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
APL_RS03700	PWY-2941	L-lysine biosynthesis II
APL_RS03700	PWY-2942	L-lysine biosynthesis III
APL_RS03700	PWY-5097	L-lysine biosynthesis VI
APL_RS03700	PWY-6559	spermidine biosynthesis II
APL_RS03700	PWY-6562	norspermidine biosynthesis
APL_RS03700	PWY-7153	grixazone biosynthesis
APL_RS03765	PWY-6700	queuosine biosynthesis
APL_RS03780	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
APL_RS03780	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
APL_RS03780	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
APL_RS03780	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
APL_RS03785	PWY-5101	L-isoleucine biosynthesis II
APL_RS03785	PWY-5103	L-isoleucine biosynthesis III
APL_RS03785	PWY-5104	L-isoleucine biosynthesis IV
APL_RS03785	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
APL_RS03785	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
APL_RS03785	PWY-6389	(<i>S</i>)-acetoin biosynthesis
APL_RS03785	PWY-7111	pyruvate fermentation to isobutanol (engineered)
APL_RS03790	PWY-5101	L-isoleucine biosynthesis II
APL_RS03790	PWY-5103	L-isoleucine biosynthesis III
APL_RS03790	PWY-5104	L-isoleucine biosynthesis IV
APL_RS03790	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
APL_RS03790	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
APL_RS03790	PWY-6389	(<i>S</i>)-acetoin biosynthesis
APL_RS03790	PWY-7111	pyruvate fermentation to isobutanol (engineered)
APL_RS03830	PWY-5686	UMP biosynthesis
APL_RS03855	PWY-7205	CMP phosphorylation
APL_RS03890	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
APL_RS03905	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
APL_RS03925	PWY-5971	palmitate biosynthesis II (bacteria and plants)
APL_RS03925	PWY-5973	<i>cis</i>-vaccenate biosynthesis
APL_RS03925	PWY-5989	stearate biosynthesis II (bacteria and plants)
APL_RS03925	PWY-6113	superpathway of mycolate biosynthesis
APL_RS03925	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
APL_RS03925	PWY-6519	8-amino-7-oxononanoate biosynthesis I
APL_RS03925	PWY-7663	gondoate biosynthesis (anaerobic)
APL_RS03925	PWY-7664	oleate biosynthesis IV (anaerobic)
APL_RS03925	PWYG-321	mycolate biosynthesis
APL_RS03985	PWY-6700	queuosine biosynthesis
APL_RS04000	PWY-7039	phosphatidate metabolism, as a signaling molecule
APL_RS04035	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
APL_RS04035	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
APL_RS04045	PWY-6891	thiazole biosynthesis II (Bacillus)
APL_RS04045	PWY-6892	thiazole biosynthesis I (E. coli)
APL_RS04045	PWY-7560	methylerythritol phosphate pathway II
APL_RS04050	PWY-5686	UMP biosynthesis
APL_RS04060	PWY-7560	methylerythritol phosphate pathway II
APL_RS04135	PWY-723	alkylnitronates degradation
APL_RS04180	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
APL_RS04190	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
APL_RS04190	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
APL_RS04200	PWY-7560	methylerythritol phosphate pathway II
APL_RS04205	PWY-7560	methylerythritol phosphate pathway II
APL_RS04290	PWY-5691	urate degradation to allantoin I
APL_RS04290	PWY-7394	urate degradation to allantoin II
APL_RS04320	PWY-6123	inosine-5'-phosphate biosynthesis I
APL_RS04320	PWY-6124	inosine-5'-phosphate biosynthesis II
APL_RS04320	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
APL_RS04320	PWY-7234	inosine-5'-phosphate biosynthesis III
APL_RS04360	PWY-1622	formaldehyde assimilation I (serine pathway)
APL_RS04360	PWY-5484	glycolysis II (from fructose 6-phosphate)
APL_RS04370	PWY-7193	pyrimidine ribonucleosides salvage I
APL_RS04375	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
APL_RS04415	PWY-6004	glycine betaine biosynthesis V (from glycine)
APL_RS04420	PWY-6700	queuosine biosynthesis
APL_RS04465	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
APL_RS04465	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
APL_RS04465	PWY-6936	seleno-amino acid biosynthesis
APL_RS04465	PWY-702	L-methionine biosynthesis II
APL_RS04470	PWY-2201	folate transformations I
APL_RS04470	PWY-3841	folate transformations II
APL_RS04535	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
APL_RS04610	PWY-3841	folate transformations II
APL_RS04610	PWY-6614	tetrahydrofolate biosynthesis
APL_RS04615	PWY-3341	L-proline biosynthesis III
APL_RS04615	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
APL_RS04635	PWY-1361	benzoyl-CoA degradation I (aerobic)
APL_RS04635	PWY-5109	2-methylbutanoate biosynthesis
APL_RS04635	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
APL_RS04635	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
APL_RS04635	PWY-5177	glutaryl-CoA degradation
APL_RS04635	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
APL_RS04635	PWY-6435	4-hydroxybenzoate biosynthesis V
APL_RS04635	PWY-6583	pyruvate fermentation to butanol I
APL_RS04635	PWY-6863	pyruvate fermentation to hexanol
APL_RS04635	PWY-6883	pyruvate fermentation to butanol II
APL_RS04635	PWY-6944	androstenedione degradation
APL_RS04635	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
APL_RS04635	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
APL_RS04635	PWY-7007	methyl ketone biosynthesis
APL_RS04635	PWY-7046	4-coumarate degradation (anaerobic)
APL_RS04635	PWY-7094	fatty acid salvage
APL_RS04635	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
APL_RS04635	PWY-735	jasmonic acid biosynthesis
APL_RS04635	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
APL_RS04635	PWY-7606	docosahexaenoate biosynthesis III (mammals)
APL_RS04635	PWY-7726	APL_RS04635
APL_RS04690	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
APL_RS04690	PWY-2201	folate transformations I
APL_RS04690	PWY-3841	folate transformations II
APL_RS04690	PWY-5030	L-histidine degradation III
APL_RS04690	PWY-5497	purine nucleobases degradation II (anaerobic)
APL_RS04690	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
APL_RS04700	PWY-2941	L-lysine biosynthesis II
APL_RS04700	PWY-2942	L-lysine biosynthesis III
APL_RS04700	PWY-5097	L-lysine biosynthesis VI
APL_RS04720	PWY-5663	tetrahydrobiopterin biosynthesis I
APL_RS04720	PWY-5664	tetrahydrobiopterin biosynthesis II
APL_RS04720	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
APL_RS04720	PWY-6703	preQ<sub>0</sub> biosynthesis
APL_RS04720	PWY-6983	tetrahydrobiopterin biosynthesis III
APL_RS04720	PWY-7442	drosopterin and aurodrosopterin biosynthesis
APL_RS04725	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
APL_RS04725	PWY-7676	Kdo8N transfer to lipid IV<sub>A</sub>
APL_RS04865	PWY-6823	molybdenum cofactor biosynthesis
APL_RS04865	PWY-6891	thiazole biosynthesis II (Bacillus)
APL_RS04865	PWY-6892	thiazole biosynthesis I (E. coli)
APL_RS04865	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
APL_RS04900	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
APL_RS04905	PWY-2201	folate transformations I
APL_RS04905	PWY-6519	8-amino-7-oxononanoate biosynthesis I
APL_RS04935	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
APL_RS04935	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
APL_RS05010	PWY-6123	inosine-5'-phosphate biosynthesis I
APL_RS05010	PWY-6124	inosine-5'-phosphate biosynthesis II
APL_RS05010	PWY-7234	inosine-5'-phosphate biosynthesis III
APL_RS05150	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
APL_RS05150	PWY-5723	Rubisco shunt
APL_RS05150	PWY-6891	thiazole biosynthesis II (Bacillus)
APL_RS05150	PWY-6892	thiazole biosynthesis I (E. coli)
APL_RS05150	PWY-6901	superpathway of glucose and xylose degradation
APL_RS05150	PWY-7560	methylerythritol phosphate pathway II
APL_RS05195	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
APL_RS05195	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
APL_RS05195	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
APL_RS05195	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
APL_RS05195	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
APL_RS05195	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
APL_RS05195	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
APL_RS05195	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
APL_RS05200	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
APL_RS05200	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
APL_RS05200	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
APL_RS05200	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
APL_RS05200	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
APL_RS05200	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
APL_RS05200	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
APL_RS05200	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
APL_RS05205	PWY-6317	galactose degradation I (Leloir pathway)
APL_RS05205	PWY-6527	stachyose degradation
APL_RS05210	PWY-3821	galactose degradation III
APL_RS05210	PWY-6317	galactose degradation I (Leloir pathway)
APL_RS05210	PWY-6527	stachyose degradation
APL_RS05215	PWY-6317	galactose degradation I (Leloir pathway)
APL_RS05220	PWY-6807	xyloglucan degradation II (exoglucanase)
APL_RS05280	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
APL_RS05280	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
APL_RS05285	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
APL_RS05285	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
APL_RS05290	PWY-3162	L-tryptophan degradation V (side chain pathway)
APL_RS05290	PWY-5057	L-valine degradation II
APL_RS05290	PWY-5076	L-leucine degradation III
APL_RS05290	PWY-5078	L-isoleucine degradation II
APL_RS05290	PWY-5079	L-phenylalanine degradation III
APL_RS05290	PWY-5082	L-methionine degradation III
APL_RS05290	PWY-5162	2-oxopentenoate degradation
APL_RS05290	PWY-5436	L-threonine degradation IV
APL_RS05290	PWY-5480	pyruvate fermentation to ethanol I
APL_RS05290	PWY-5486	pyruvate fermentation to ethanol II
APL_RS05290	PWY-5751	phenylethanol biosynthesis
APL_RS05290	PWY-6313	serotonin degradation
APL_RS05290	PWY-6333	acetaldehyde biosynthesis I
APL_RS05290	PWY-6342	noradrenaline and adrenaline degradation
APL_RS05290	PWY-6587	pyruvate fermentation to ethanol III
APL_RS05290	PWY-6802	salidroside biosynthesis
APL_RS05290	PWY-6871	3-methylbutanol biosynthesis
APL_RS05290	PWY-7013	L-1,2-propanediol degradation
APL_RS05290	PWY-7085	triethylamine degradation
APL_RS05290	PWY-7111	pyruvate fermentation to isobutanol (engineered)
APL_RS05290	PWY-7118	chitin degradation to ethanol
APL_RS05290	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
APL_RS05290	PWY-7396	butanol and isobutanol biosynthesis (engineered)
APL_RS05305	PWY-4202	arsenate detoxification I (glutaredoxin)
APL_RS05305	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
APL_RS05305	PWY-6608	guanosine nucleotides degradation III
APL_RS05305	PWY-6609	adenine and adenosine salvage III
APL_RS05305	PWY-6611	adenine and adenosine salvage V
APL_RS05305	PWY-6620	guanine and guanosine salvage
APL_RS05305	PWY-6627	salinosporamide A biosynthesis
APL_RS05305	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
APL_RS05305	PWY-7179	purine deoxyribonucleosides degradation I
APL_RS05305	PWY-7179-1	purine deoxyribonucleosides degradation
APL_RS05310	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
APL_RS05325	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
APL_RS05325	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
APL_RS05325	PWY-7242	D-fructuronate degradation
APL_RS05325	PWY-7310	D-glucosaminate degradation
APL_RS05325	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
APL_RS05335	PWY-7247	&beta;-D-glucuronide and D-glucuronate degradation
APL_RS05335	PWY-7248	pectin degradation III
APL_RS05400	PWY-3461	L-tyrosine biosynthesis II
APL_RS05400	PWY-3462	L-phenylalanine biosynthesis II
APL_RS05400	PWY-6120	L-tyrosine biosynthesis III
APL_RS05400	PWY-6627	salinosporamide A biosynthesis
APL_RS05400	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
APL_RS05400	PWY-7626	bacilysin biosynthesis
APL_RS05415	PWY-5480	pyruvate fermentation to ethanol I
APL_RS05415	PWY-5485	pyruvate fermentation to acetate IV
APL_RS05415	PWY-5493	reductive monocarboxylic acid cycle
APL_RS05445	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
APL_RS05445	PWY-5901	2,3-dihydroxybenzoate biosynthesis
APL_RS05445	PWY-6406	salicylate biosynthesis I
APL_RS05475	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
APL_RS05475	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
APL_RS05610	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
APL_RS05635	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
APL_RS05635	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
APL_RS05660	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
APL_RS05680	PWY-4202	arsenate detoxification I (glutaredoxin)
APL_RS05680	PWY-4621	arsenate detoxification II (glutaredoxin)
APL_RS05690	PWY-5392	reductive TCA cycle II
APL_RS05690	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
APL_RS05690	PWY-5690	TCA cycle II (plants and fungi)
APL_RS05690	PWY-5913	TCA cycle VI (obligate autotrophs)
APL_RS05690	PWY-6728	methylaspartate cycle
APL_RS05690	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
APL_RS05690	PWY-7254	TCA cycle VII (acetate-producers)
APL_RS05690	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
APL_RS05710	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
APL_RS05710	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
APL_RS05710	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
APL_RS05715	PWY-6902	chitin degradation II
APL_RS05720	PWY-6703	preQ<sub>0</sub> biosynthesis
APL_RS05730	PWY-6703	preQ<sub>0</sub> biosynthesis
APL_RS05775	PWY-5667	CDP-diacylglycerol biosynthesis I
APL_RS05775	PWY-6453	stigma estolide biosynthesis
APL_RS05775	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
APL_RS05775	PWY-7587	oleate biosynthesis III (cyanobacteria)
APL_RS05795	PWY-6902	chitin degradation II
APL_RS05805	PWY-1042	glycolysis IV (plant cytosol)
APL_RS05805	PWY-1622	formaldehyde assimilation I (serine pathway)
APL_RS05805	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
APL_RS05805	PWY-5484	glycolysis II (from fructose 6-phosphate)
APL_RS05805	PWY-5723	Rubisco shunt
APL_RS05805	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
APL_RS05805	PWY-6886	1-butanol autotrophic biosynthesis
APL_RS05805	PWY-6901	superpathway of glucose and xylose degradation
APL_RS05805	PWY-7003	glycerol degradation to butanol
APL_RS05805	PWY-7124	ethylene biosynthesis V (engineered)
APL_RS05805	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
APL_RS05840	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
APL_RS05840	PWY-5368	dimorphecolate biosynthesis
APL_RS05840	PWY-5995	linoleate biosynthesis I (plants)
APL_RS05840	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
APL_RS05840	PWY-6803	phosphatidylcholine acyl editing
APL_RS05840	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
APL_RS05840	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
APL_RS05840	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
APL_RS05840	PWY-7470	phosphatidylcholine biosynthesis VII
APL_RS05840	PWY-7618	ricinoleate biosynthesis
APL_RS05860	PWY-1042	glycolysis IV (plant cytosol)
APL_RS05860	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
APL_RS05860	PWY-5484	glycolysis II (from fructose 6-phosphate)
APL_RS05860	PWY-7385	1,3-propanediol biosynthesis (engineered)
APL_RS05900	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
APL_RS05925	PWY-3801	sucrose degradation II (sucrose synthase)
APL_RS05925	PWY-5054	sorbitol biosynthesis I
APL_RS05925	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
APL_RS05925	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
APL_RS05925	PWY-5659	GDP-mannose biosynthesis
APL_RS05925	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
APL_RS05925	PWY-621	sucrose degradation III (sucrose invertase)
APL_RS05925	PWY-622	starch biosynthesis
APL_RS05925	PWY-6981	chitin biosynthesis
APL_RS05925	PWY-6992	1,5-anhydrofructose degradation
APL_RS05925	PWY-7238	sucrose biosynthesis II
APL_RS05925	PWY-7347	sucrose biosynthesis III
APL_RS05925	PWY-7385	1,3-propanediol biosynthesis (engineered)
APL_RS05960	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
APL_RS05995	PWY-5958	acridone alkaloid biosynthesis
APL_RS05995	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
APL_RS05995	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
APL_RS06005	PWY-5958	acridone alkaloid biosynthesis
APL_RS06005	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
APL_RS06005	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
APL_RS06020	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
APL_RS06045	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
APL_RS06045	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
APL_RS06045	PWY-6936	seleno-amino acid biosynthesis
APL_RS06045	PWY-702	L-methionine biosynthesis II
APL_RS06085	PWY-5958	acridone alkaloid biosynthesis
APL_RS06085	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
APL_RS06085	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
APL_RS06090	PWY-5958	acridone alkaloid biosynthesis
APL_RS06090	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
APL_RS06090	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
APL_RS06135	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
APL_RS06135	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
APL_RS06135	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
APL_RS06170	PWY-4983	L-citrulline-nitric oxide cycle
APL_RS06170	PWY-4984	urea cycle
APL_RS06170	PWY-5	canavanine biosynthesis
APL_RS06170	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
APL_RS06170	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
APL_RS06290	PWY-6012	acyl carrier protein metabolism I
APL_RS06295	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
APL_RS06315	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
APL_RS06315	PWY-3162	L-tryptophan degradation V (side chain pathway)
APL_RS06315	PWY-5057	L-valine degradation II
APL_RS06315	PWY-5076	L-leucine degradation III
APL_RS06315	PWY-5078	L-isoleucine degradation II
APL_RS06315	PWY-5079	L-phenylalanine degradation III
APL_RS06315	PWY-5082	L-methionine degradation III
APL_RS06315	PWY-5480	pyruvate fermentation to ethanol I
APL_RS06315	PWY-5486	pyruvate fermentation to ethanol II
APL_RS06315	PWY-5751	phenylethanol biosynthesis
APL_RS06315	PWY-6313	serotonin degradation
APL_RS06315	PWY-6333	acetaldehyde biosynthesis I
APL_RS06315	PWY-6342	noradrenaline and adrenaline degradation
APL_RS06315	PWY-6454	vancomycin resistance I
APL_RS06315	PWY-6587	pyruvate fermentation to ethanol III
APL_RS06315	PWY-6802	salidroside biosynthesis
APL_RS06315	PWY-6871	3-methylbutanol biosynthesis
APL_RS06315	PWY-6901	superpathway of glucose and xylose degradation
APL_RS06315	PWY-7013	L-1,2-propanediol degradation
APL_RS06315	PWY-7111	pyruvate fermentation to isobutanol (engineered)
APL_RS06315	PWY-7118	chitin degradation to ethanol
APL_RS06315	PWY-7396	butanol and isobutanol biosynthesis (engineered)
APL_RS06355	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
APL_RS06355	PWY-6153	autoinducer AI-2 biosynthesis I
APL_RS06355	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
APL_RS06385	PWY-2941	L-lysine biosynthesis II
APL_RS06385	PWY-2942	L-lysine biosynthesis III
APL_RS06385	PWY-5097	L-lysine biosynthesis VI
APL_RS06385	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
APL_RS06385	PWY-6559	spermidine biosynthesis II
APL_RS06385	PWY-6562	norspermidine biosynthesis
APL_RS06385	PWY-7153	grixazone biosynthesis
APL_RS06385	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
APL_RS06435	PWY-5941	glycogen degradation II (eukaryotic)
APL_RS06435	PWY-6731	starch degradation III
APL_RS06435	PWY-6737	starch degradation V
APL_RS06435	PWY-7238	sucrose biosynthesis II
APL_RS06475	PWY-5941	glycogen degradation II (eukaryotic)
APL_RS06475	PWY-6724	starch degradation II
APL_RS06475	PWY-6737	starch degradation V
APL_RS06475	PWY-7238	sucrose biosynthesis II
APL_RS06490	PWY-4081	glutathione redox reactions I
APL_RS06525	PWY-1042	glycolysis IV (plant cytosol)
APL_RS06525	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
APL_RS06525	PWY-5484	glycolysis II (from fructose 6-phosphate)
APL_RS06525	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
APL_RS06525	PWY-7385	1,3-propanediol biosynthesis (engineered)
APL_RS06530	PWY-1042	glycolysis IV (plant cytosol)
APL_RS06530	PWY-5484	glycolysis II (from fructose 6-phosphate)
APL_RS06530	PWY-6886	1-butanol autotrophic biosynthesis
APL_RS06530	PWY-6901	superpathway of glucose and xylose degradation
APL_RS06530	PWY-7003	glycerol degradation to butanol
APL_RS06645	PWY-2201	folate transformations I
APL_RS06670	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
APL_RS06750	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
APL_RS06750	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
APL_RS06800	PWY-1622	formaldehyde assimilation I (serine pathway)
APL_RS06800	PWY-5392	reductive TCA cycle II
APL_RS06800	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
APL_RS06800	PWY-5690	TCA cycle II (plants and fungi)
APL_RS06800	PWY-5913	TCA cycle VI (obligate autotrophs)
APL_RS06800	PWY-6728	methylaspartate cycle
APL_RS06800	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
APL_RS06800	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
APL_RS06800	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
APL_RS06810	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
APL_RS06825	PWY-3821	galactose degradation III
APL_RS06825	PWY-6317	galactose degradation I (Leloir pathway)
APL_RS06825	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
APL_RS06825	PWY-6527	stachyose degradation
APL_RS06825	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
APL_RS06825	PWY-7344	UDP-D-galactose biosynthesis
APL_RS06870	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
APL_RS06870	PWY-6855	chitin degradation I (archaea)
APL_RS06870	PWY-6906	chitin derivatives degradation
APL_RS06875	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
APL_RS06910	PWY-4981	L-proline biosynthesis II (from arginine)
APL_RS06910	PWY-4984	urea cycle
APL_RS06910	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
APL_RS06975	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
APL_RS06975	PWY-5368	dimorphecolate biosynthesis
APL_RS06975	PWY-5995	linoleate biosynthesis I (plants)
APL_RS06975	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
APL_RS06975	PWY-6803	phosphatidylcholine acyl editing
APL_RS06975	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
APL_RS06975	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
APL_RS06975	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
APL_RS06975	PWY-7470	phosphatidylcholine biosynthesis VII
APL_RS06975	PWY-7618	ricinoleate biosynthesis
APL_RS07065	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
APL_RS07065	PWY-6148	tetrahydromethanopterin biosynthesis
APL_RS07065	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
APL_RS07065	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
APL_RS07070	PWY-6556	pyrimidine ribonucleosides salvage II
APL_RS07070	PWY-7181	pyrimidine deoxyribonucleosides degradation
APL_RS07070	PWY-7193	pyrimidine ribonucleosides salvage I
APL_RS07070	PWY-7199	pyrimidine deoxyribonucleosides salvage
APL_RS07090	PWY-6825	phosphatidylcholine biosynthesis V
APL_RS07160	PWY-2201	folate transformations I
APL_RS07275	PWY-6339	syringate degradation
APL_RS07285	PWY-6339	syringate degradation
APL_RS07320	PWY-4381	fatty acid biosynthesis initiation I
APL_RS07380	PWY-3861	mannitol degradation II
APL_RS07380	PWY-3881	mannitol biosynthesis
APL_RS07380	PWY-5659	GDP-mannose biosynthesis
APL_RS07380	PWY-6992	1,5-anhydrofructose degradation
APL_RS07380	PWY-7456	mannan degradation
APL_RS07380	PWY-7586	&beta;-1,4-D-mannosyl-<i>N</i>-acetyl-D-glucosamine degradation
APL_RS07380	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
APL_RS07440	PWY-5669	phosphatidylethanolamine biosynthesis I
APL_RS07445	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
APL_RS07445	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
APL_RS07445	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
APL_RS07445	PWY-6840	homoglutathione biosynthesis
APL_RS07445	PWY-7255	ergothioneine biosynthesis I (bacteria)
APL_RS07475	PWY-7254	TCA cycle VII (acetate-producers)
APL_RS07600	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
APL_RS07600	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
APL_RS07600	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
APL_RS07600	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
APL_RS07600	PWY-6978	plastoquinol-9 biosynthesis II
APL_RS07655	PWY-5484	glycolysis II (from fructose 6-phosphate)
APL_RS07670	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
APL_RS07670	PWY-5723	Rubisco shunt
APL_RS07675	PWY-6749	CMP-legionaminate biosynthesis I
APL_RS07710	PWY-5839	menaquinol-7 biosynthesis
APL_RS07710	PWY-5851	demethylmenaquinol-9 biosynthesis
APL_RS07710	PWY-5852	demethylmenaquinol-8 biosynthesis I
APL_RS07710	PWY-5853	demethylmenaquinol-6 biosynthesis I
APL_RS07710	PWY-5890	menaquinol-10 biosynthesis
APL_RS07710	PWY-5891	menaquinol-11 biosynthesis
APL_RS07710	PWY-5892	menaquinol-12 biosynthesis
APL_RS07710	PWY-5895	menaquinol-13 biosynthesis
APL_RS07740	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
APL_RS07740	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
APL_RS07740	PWY-7622	UDP-galactofuranose biosynthesis
APL_RS07765	PWY-3221	dTDP-L-rhamnose biosynthesis II
APL_RS07765	PWY-6808	dTDP-D-forosamine biosynthesis
APL_RS07765	PWY-6942	dTDP-D-desosamine biosynthesis
APL_RS07765	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
APL_RS07765	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
APL_RS07765	PWY-6974	dTDP-L-olivose biosynthesis
APL_RS07765	PWY-6976	dTDP-L-mycarose biosynthesis
APL_RS07765	PWY-7104	dTDP-L-megosamine biosynthesis
APL_RS07765	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
APL_RS07765	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
APL_RS07765	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
APL_RS07765	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
APL_RS07765	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
APL_RS07765	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
APL_RS07765	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
APL_RS07765	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
APL_RS07765	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
APL_RS07765	PWY-7688	APL_RS07765
APL_RS07830	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
APL_RS07830	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
APL_RS07840	PWY-4381	fatty acid biosynthesis initiation I
APL_RS07840	PWY-5743	3-hydroxypropanoate cycle
APL_RS07840	PWY-5744	glyoxylate assimilation
APL_RS07840	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
APL_RS07840	PWY-6679	jadomycin biosynthesis
APL_RS07840	PWY-6722	candicidin biosynthesis
APL_RS07840	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
APL_RS07850	PWY-5667	CDP-diacylglycerol biosynthesis I
APL_RS07850	PWY-5981	CDP-diacylglycerol biosynthesis III
APL_RS07850	PWY-6453	stigma estolide biosynthesis
APL_RS07850	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
APL_RS07850	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
APL_RS07850	PWY-7587	oleate biosynthesis III (cyanobacteria)
APL_RS07850	PWY-7589	palmitoleate biosynthesis III (cyanobacteria)
APL_RS07960	PWY-5667	CDP-diacylglycerol biosynthesis I
APL_RS07960	PWY-5981	CDP-diacylglycerol biosynthesis III
APL_RS07965	PWY-6936	seleno-amino acid biosynthesis
APL_RS07965	PWY-7274	D-cycloserine biosynthesis
APL_RS07995	PWY-3961	phosphopantothenate biosynthesis II
APL_RS08055	PWY-2941	L-lysine biosynthesis II
APL_RS08055	PWY-2942	L-lysine biosynthesis III
APL_RS08055	PWY-5097	L-lysine biosynthesis VI
APL_RS08075	PWY-3781	aerobic respiration I (cytochrome c)
APL_RS08075	PWY-4302	aerobic respiration III (alternative oxidase pathway)
APL_RS08075	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
APL_RS08075	PWY-5690	TCA cycle II (plants and fungi)
APL_RS08075	PWY-6728	methylaspartate cycle
APL_RS08075	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
APL_RS08075	PWY-7254	TCA cycle VII (acetate-producers)
APL_RS08075	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
APL_RS08080	PWY-3781	aerobic respiration I (cytochrome c)
APL_RS08080	PWY-4302	aerobic respiration III (alternative oxidase pathway)
APL_RS08080	PWY-5392	reductive TCA cycle II
APL_RS08080	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
APL_RS08080	PWY-5690	TCA cycle II (plants and fungi)
APL_RS08080	PWY-5913	TCA cycle VI (obligate autotrophs)
APL_RS08080	PWY-6728	methylaspartate cycle
APL_RS08080	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
APL_RS08080	PWY-7254	TCA cycle VII (acetate-producers)
APL_RS08080	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
APL_RS08080	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
APL_RS08090	PWY-2941	L-lysine biosynthesis II
APL_RS08090	PWY-5097	L-lysine biosynthesis VI
APL_RS08200	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
APL_RS08200	PWY-622	starch biosynthesis
APL_RS08230	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
APL_RS08245	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
APL_RS08255	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
APL_RS08255	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
APL_RS08255	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
APL_RS08255	PWY-7290	<i>Escherichia coli</i> serotype O86 <i>O</i>-antigen biosynthesis
APL_RS08255	PWY-7530	&beta;-D-galactosaminyl-(1&rarr;3)-<i>N</i>-acetyl-&alpha;-D-galactosamine biosynthesis
APL_RS08260	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
APL_RS08285	PWY-6825	phosphatidylcholine biosynthesis V
APL_RS08310	PWY-4261	glycerol degradation I
APL_RS08380	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
APL_RS08385	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
APL_RS08385	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
APL_RS08460	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
APL_RS08460	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
APL_RS08465	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
APL_RS08465	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
APL_RS08475	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
APL_RS08475	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
APL_RS08495	PWY-6825	phosphatidylcholine biosynthesis V
APL_RS08575	PWY-5704	urea degradation II
APL_RS08580	PWY-5704	urea degradation II
APL_RS08585	PWY-5704	urea degradation II
APL_RS08640	PWY-6531	mannitol cycle
APL_RS08650	PWY-6749	CMP-legionaminate biosynthesis I
APL_RS08680	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
APL_RS08680	PWY-6153	autoinducer AI-2 biosynthesis I
APL_RS08680	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
APL_RS08750	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
APL_RS08760	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
APL_RS08850	PWY-5530	sorbitol biosynthesis II
APL_RS08850	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
APL_RS08930	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
APL_RS08930	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
APL_RS08930	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
APL_RS08945	PWY-4261	glycerol degradation I
APL_RS08955	PWY-5197	lactate biosynthesis (archaea)
APL_RS09010	PWY-5686	UMP biosynthesis
APL_RS09035	PWY-6961	L-ascorbate degradation II (bacterial, aerobic)
APL_RS09305	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
APL_RS09310	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
APL_RS09330	PWY-2941	L-lysine biosynthesis II
APL_RS09330	PWY-2942	L-lysine biosynthesis III
APL_RS09330	PWY-5097	L-lysine biosynthesis VI
APL_RS09330	PWY-7581	<i>N</i>-acetylneuraminate and <i>N</i>-acetylmannosamine degradation II
APL_RS09335	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
APL_RS09335	PWY-6855	chitin degradation I (archaea)
APL_RS09335	PWY-6906	chitin derivatives degradation
APL_RS09340	PWY-6906	chitin derivatives degradation
APL_RS09340	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
APL_RS09340	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
APL_RS09345	PWY-5392	reductive TCA cycle II
APL_RS09345	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
APL_RS09345	PWY-5690	TCA cycle II (plants and fungi)
APL_RS09345	PWY-5913	TCA cycle VI (obligate autotrophs)
APL_RS09345	PWY-6728	methylaspartate cycle
APL_RS09345	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
APL_RS09345	PWY-7254	TCA cycle VII (acetate-producers)
APL_RS09345	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
APL_RS09505	PWY-6829	tRNA methylation (yeast)
APL_RS09505	PWY-7285	methylwyosine biosynthesis
APL_RS09505	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
APL_RS09645	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
APL_RS09645	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
APL_RS09645	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
APL_RS09645	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
APL_RS09645	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
APL_RS09645	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
APL_RS09675	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
APL_RS09675	PWY-5723	Rubisco shunt
APL_RS09690	PWY-1001	cellulose biosynthesis
APL_RS09690	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
APL_RS09690	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
APL_RS09690	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
APL_RS09690	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
APL_RS09695	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
APL_RS09780	PWY-4202	arsenate detoxification I (glutaredoxin)
APL_RS09780	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
APL_RS09780	PWY-6608	guanosine nucleotides degradation III
APL_RS09780	PWY-6609	adenine and adenosine salvage III
APL_RS09780	PWY-6611	adenine and adenosine salvage V
APL_RS09780	PWY-6620	guanine and guanosine salvage
APL_RS09780	PWY-6627	salinosporamide A biosynthesis
APL_RS09780	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
APL_RS09780	PWY-7179	purine deoxyribonucleosides degradation I
APL_RS09780	PWY-7179-1	purine deoxyribonucleosides degradation
APL_RS09785	PWY-5755	4-hydroxybenzoate biosynthesis II (microbes)
APL_RS09785	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
APL_RS09785	PWY-6148	tetrahydromethanopterin biosynthesis
APL_RS09790	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
APL_RS09790	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
APL_RS09815	PWY-6683	sulfate reduction III (assimilatory)
APL_RS09820	PWY-6683	sulfate reduction III (assimilatory)
APL_RS09860	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
APL_RS09860	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
APL_RS09870	PWY-5103	L-isoleucine biosynthesis III
APL_RS09870	PWY-7111	pyruvate fermentation to isobutanol (engineered)
APL_RS09910	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
APL_RS09910	PWY-6416	quinate degradation II
APL_RS09910	PWY-6707	gallate biosynthesis
APL_RS09930	PWY-5964	guanylyl molybdenum cofactor biosynthesis
APL_RS09930	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
APL_RS09980	PWY-6614	tetrahydrofolate biosynthesis
APL_RS10040	PWY-5971	palmitate biosynthesis II (bacteria and plants)
APL_RS10040	PWY-5973	<i>cis</i>-vaccenate biosynthesis
APL_RS10040	PWY-5989	stearate biosynthesis II (bacteria and plants)
APL_RS10040	PWY-5994	palmitate biosynthesis I (animals and fungi)
APL_RS10040	PWY-6113	superpathway of mycolate biosynthesis
APL_RS10040	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
APL_RS10040	PWY-6519	8-amino-7-oxononanoate biosynthesis I
APL_RS10040	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
APL_RS10040	PWY-7663	gondoate biosynthesis (anaerobic)
APL_RS10040	PWY-7664	oleate biosynthesis IV (anaerobic)
APL_RS10040	PWYG-321	mycolate biosynthesis
APL_RS10060	PWY-181	photorespiration
APL_RS10130	PWY-4261	glycerol degradation I
APL_RS10220	PWY-1042	glycolysis IV (plant cytosol)
APL_RS10220	PWY-5484	glycolysis II (from fructose 6-phosphate)
APL_RS10220	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
APL_RS10220	PWY-7003	glycerol degradation to butanol
APL_RS10230	PWY-5381	pyridine nucleotide cycling (plants)
APL_RS10230	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
APL_RS10230	PWY-6596	adenosine nucleotides degradation I
APL_RS10230	PWY-6606	guanosine nucleotides degradation II
APL_RS10230	PWY-6607	guanosine nucleotides degradation I
APL_RS10230	PWY-6608	guanosine nucleotides degradation III
APL_RS10230	PWY-7185	UTP and CTP dephosphorylation I
APL_RS10295	PWY-381	nitrate reduction II (assimilatory)
APL_RS10295	PWY-5675	nitrate reduction V (assimilatory)
APL_RS10295	PWY-6549	L-glutamine biosynthesis III
APL_RS10295	PWY-6963	ammonia assimilation cycle I
APL_RS10295	PWY-6964	ammonia assimilation cycle II
APL_RS10315	PWY-6012	acyl carrier protein metabolism I
APL_RS10315	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
APL_RS10345	PWY-3341	L-proline biosynthesis III
APL_RS10345	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
APL_RS10385	PWY-2781	<i>cis</i>-zeatin biosynthesis
APL_RS10425	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
APL_RS10425	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
APL_RS10425	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
APL_RS10425	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
APL_RS10460	PWY-6409	pyoverdine I biosynthesis
APL_RS10460	PWY-6562	norspermidine biosynthesis
APL_RS10460	PWY-761	rhizobactin 1021 biosynthesis
APL_RS10510	PWY-5839	menaquinol-7 biosynthesis
APL_RS10510	PWY-5844	menaquinol-9 biosynthesis
APL_RS10510	PWY-5849	menaquinol-6 biosynthesis
APL_RS10510	PWY-5890	menaquinol-10 biosynthesis
APL_RS10510	PWY-5891	menaquinol-11 biosynthesis
APL_RS10510	PWY-5892	menaquinol-12 biosynthesis
APL_RS10510	PWY-5895	menaquinol-13 biosynthesis
APL_RS10540	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
APL_RS10540	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
APL_RS10560	PWY-5367	petroselinate biosynthesis
APL_RS10560	PWY-5515	L-arabinose degradation II
APL_RS10560	PWY-5525	D-glucuronate degradation I
APL_RS10560	PWY-5971	palmitate biosynthesis II (bacteria and plants)
APL_RS10560	PWY-5973	<i>cis</i>-vaccenate biosynthesis
APL_RS10560	PWY-5989	stearate biosynthesis II (bacteria and plants)
APL_RS10560	PWY-5994	palmitate biosynthesis I (animals and fungi)
APL_RS10560	PWY-6113	superpathway of mycolate biosynthesis
APL_RS10560	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
APL_RS10560	PWY-6519	8-amino-7-oxononanoate biosynthesis I
APL_RS10560	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
APL_RS10560	PWY-7663	gondoate biosynthesis (anaerobic)
APL_RS10560	PWY-7664	oleate biosynthesis IV (anaerobic)
APL_RS10560	PWYG-321	mycolate biosynthesis
APL_RS10565	PWY-4381	fatty acid biosynthesis initiation I
APL_RS10565	PWY-6799	fatty acid biosynthesis (plant mitochondria)
APL_RS10565	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
APL_RS10625	PWY-6825	phosphatidylcholine biosynthesis V
APL_RS10645	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
APL_RS10645	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
APL_RS10690	PWY-6123	inosine-5'-phosphate biosynthesis I
APL_RS10690	PWY-6124	inosine-5'-phosphate biosynthesis II
APL_RS10690	PWY-7234	inosine-5'-phosphate biosynthesis III
APL_RS10780	PWY-6523	nitrite-dependent anaerobic methane oxidation
APL_RS10780	PWY-6748	nitrate reduction VII (denitrification)
APL_RS10780	PWY-7084	nitrifier denitrification
APL_RS10805	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
APL_RS10805	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
